Multiple sequence alignment - TraesCS6A01G006100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G006100 chr6A 100.000 2378 0 0 1 2378 2266247 2263870 0.000000e+00 4392
1 TraesCS6A01G006100 chr6B 89.292 579 46 10 885 1458 7220416 7220983 0.000000e+00 712
2 TraesCS6A01G006100 chr6B 88.660 582 47 12 885 1458 7178444 7179014 0.000000e+00 691
3 TraesCS6A01G006100 chr6B 87.197 578 61 7 885 1458 6817157 6816589 0.000000e+00 645
4 TraesCS6A01G006100 chr6B 83.023 483 59 11 132 612 6817653 6817192 1.310000e-112 416
5 TraesCS6A01G006100 chr6B 85.933 327 40 6 2053 2378 7179562 7179883 6.290000e-91 344
6 TraesCS6A01G006100 chr6B 85.627 327 42 5 2053 2378 7221760 7222082 2.930000e-89 339
7 TraesCS6A01G006100 chr6B 85.759 316 41 4 2064 2378 6816057 6815745 4.900000e-87 331
8 TraesCS6A01G006100 chr6B 79.655 290 44 9 1737 2020 7179286 7179566 6.710000e-46 195
9 TraesCS6A01G006100 chr6B 79.655 290 44 9 1737 2020 7221484 7221764 6.710000e-46 195
10 TraesCS6A01G006100 chrUn 88.581 578 57 6 885 1458 415038096 415038668 0.000000e+00 693
11 TraesCS6A01G006100 chrUn 82.725 411 49 10 204 612 415037671 415038061 1.750000e-91 346
12 TraesCS6A01G006100 chrUn 85.804 317 39 4 2064 2378 322770630 322770318 4.900000e-87 331
13 TraesCS6A01G006100 chr6D 84.948 578 55 11 885 1458 3486329 3485780 7.430000e-155 556
14 TraesCS6A01G006100 chr6D 90.291 412 36 2 885 1296 3473326 3472919 9.670000e-149 536
15 TraesCS6A01G006100 chr6D 83.230 483 58 11 132 612 3473822 3473361 2.830000e-114 422
16 TraesCS6A01G006100 chr6D 83.023 483 59 11 132 612 3486825 3486364 1.310000e-112 416
17 TraesCS6A01G006100 chr6D 86.190 210 23 6 2064 2270 3471886 3471680 3.080000e-54 222
18 TraesCS6A01G006100 chr6D 79.930 284 42 9 1745 2023 3472161 3471888 6.710000e-46 195
19 TraesCS6A01G006100 chr5D 78.926 242 46 5 1870 2109 215250804 215251042 2.450000e-35 159
20 TraesCS6A01G006100 chr5B 77.273 242 50 5 1870 2109 230771724 230771962 1.150000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G006100 chr6A 2263870 2266247 2377 True 4392.000000 4392 100.000000 1 2378 1 chr6A.!!$R1 2377
1 TraesCS6A01G006100 chr6B 6815745 6817653 1908 True 464.000000 645 85.326333 132 2378 3 chr6B.!!$R1 2246
2 TraesCS6A01G006100 chr6B 7220416 7222082 1666 False 415.333333 712 84.858000 885 2378 3 chr6B.!!$F2 1493
3 TraesCS6A01G006100 chr6B 7178444 7179883 1439 False 410.000000 691 84.749333 885 2378 3 chr6B.!!$F1 1493
4 TraesCS6A01G006100 chrUn 415037671 415038668 997 False 519.500000 693 85.653000 204 1458 2 chrUn.!!$F1 1254
5 TraesCS6A01G006100 chr6D 3485780 3486825 1045 True 486.000000 556 83.985500 132 1458 2 chr6D.!!$R2 1326
6 TraesCS6A01G006100 chr6D 3471680 3473822 2142 True 343.750000 536 84.910250 132 2270 4 chr6D.!!$R1 2138

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
129 130 0.250901 TTTGAGCCTGGTCCTCTTGC 60.251 55.0 0.0 0.0 0.0 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2079 2398 0.53109 TACCGTGCTGACGTTTGCTT 60.531 50.0 13.4 1.1 44.54 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 9.939802 AGACTAAACGGTAAGAAGATAAATTGT 57.060 29.630 0.00 0.00 0.00 2.71
50 51 9.893305 AACGGTAAGAAGATAAATTGTTTTGAG 57.107 29.630 0.00 0.00 0.00 3.02
51 52 9.280174 ACGGTAAGAAGATAAATTGTTTTGAGA 57.720 29.630 0.00 0.00 0.00 3.27
57 58 9.956720 AGAAGATAAATTGTTTTGAGAACTGTG 57.043 29.630 0.00 0.00 0.00 3.66
58 59 9.950680 GAAGATAAATTGTTTTGAGAACTGTGA 57.049 29.630 0.00 0.00 0.00 3.58
59 60 9.736023 AAGATAAATTGTTTTGAGAACTGTGAC 57.264 29.630 0.00 0.00 0.00 3.67
60 61 9.125026 AGATAAATTGTTTTGAGAACTGTGACT 57.875 29.630 0.00 0.00 0.00 3.41
61 62 9.736023 GATAAATTGTTTTGAGAACTGTGACTT 57.264 29.630 0.00 0.00 0.00 3.01
63 64 8.466086 AAATTGTTTTGAGAACTGTGACTTTC 57.534 30.769 0.00 0.00 0.00 2.62
64 65 6.817765 TTGTTTTGAGAACTGTGACTTTCT 57.182 33.333 0.53 0.53 34.68 2.52
65 66 6.817765 TGTTTTGAGAACTGTGACTTTCTT 57.182 33.333 2.33 0.00 32.04 2.52
66 67 7.214467 TGTTTTGAGAACTGTGACTTTCTTT 57.786 32.000 2.33 0.00 32.04 2.52
67 68 7.305474 TGTTTTGAGAACTGTGACTTTCTTTC 58.695 34.615 2.33 0.00 32.04 2.62
68 69 7.174946 TGTTTTGAGAACTGTGACTTTCTTTCT 59.825 33.333 2.33 0.00 32.04 2.52
69 70 6.910536 TTGAGAACTGTGACTTTCTTTCTC 57.089 37.500 0.00 0.00 39.51 2.87
70 71 6.227298 TGAGAACTGTGACTTTCTTTCTCT 57.773 37.500 9.79 0.00 39.69 3.10
71 72 6.276847 TGAGAACTGTGACTTTCTTTCTCTC 58.723 40.000 9.79 0.00 39.69 3.20
72 73 6.127338 TGAGAACTGTGACTTTCTTTCTCTCA 60.127 38.462 9.79 0.00 39.69 3.27
73 74 6.644347 AGAACTGTGACTTTCTTTCTCTCAA 58.356 36.000 0.00 0.00 0.00 3.02
74 75 6.760770 AGAACTGTGACTTTCTTTCTCTCAAG 59.239 38.462 0.00 0.00 0.00 3.02
75 76 6.227298 ACTGTGACTTTCTTTCTCTCAAGA 57.773 37.500 0.00 0.00 0.00 3.02
76 77 6.644347 ACTGTGACTTTCTTTCTCTCAAGAA 58.356 36.000 0.00 0.00 40.36 2.52
77 78 6.760770 ACTGTGACTTTCTTTCTCTCAAGAAG 59.239 38.462 0.00 0.00 42.43 2.85
78 79 6.051717 TGTGACTTTCTTTCTCTCAAGAAGG 58.948 40.000 4.30 4.30 42.43 3.46
79 80 6.127054 TGTGACTTTCTTTCTCTCAAGAAGGA 60.127 38.462 11.09 0.96 43.58 3.36
92 93 8.787852 TCTCTCAAGAAGGAAAAATAGAAAAGC 58.212 33.333 0.00 0.00 0.00 3.51
93 94 8.463930 TCTCAAGAAGGAAAAATAGAAAAGCA 57.536 30.769 0.00 0.00 0.00 3.91
94 95 8.571336 TCTCAAGAAGGAAAAATAGAAAAGCAG 58.429 33.333 0.00 0.00 0.00 4.24
95 96 8.463930 TCAAGAAGGAAAAATAGAAAAGCAGA 57.536 30.769 0.00 0.00 0.00 4.26
96 97 8.912988 TCAAGAAGGAAAAATAGAAAAGCAGAA 58.087 29.630 0.00 0.00 0.00 3.02
97 98 9.533253 CAAGAAGGAAAAATAGAAAAGCAGAAA 57.467 29.630 0.00 0.00 0.00 2.52
99 100 9.755804 AGAAGGAAAAATAGAAAAGCAGAAAAG 57.244 29.630 0.00 0.00 0.00 2.27
100 101 9.750125 GAAGGAAAAATAGAAAAGCAGAAAAGA 57.250 29.630 0.00 0.00 0.00 2.52
107 108 9.534565 AAATAGAAAAGCAGAAAAGAAAAGGAC 57.465 29.630 0.00 0.00 0.00 3.85
108 109 6.530019 AGAAAAGCAGAAAAGAAAAGGACA 57.470 33.333 0.00 0.00 0.00 4.02
109 110 6.935167 AGAAAAGCAGAAAAGAAAAGGACAA 58.065 32.000 0.00 0.00 0.00 3.18
110 111 7.559486 AGAAAAGCAGAAAAGAAAAGGACAAT 58.441 30.769 0.00 0.00 0.00 2.71
111 112 8.043113 AGAAAAGCAGAAAAGAAAAGGACAATT 58.957 29.630 0.00 0.00 0.00 2.32
112 113 8.565896 AAAAGCAGAAAAGAAAAGGACAATTT 57.434 26.923 0.00 0.00 0.00 1.82
113 114 7.543947 AAGCAGAAAAGAAAAGGACAATTTG 57.456 32.000 0.00 0.00 0.00 2.32
114 115 6.877236 AGCAGAAAAGAAAAGGACAATTTGA 58.123 32.000 2.79 0.00 0.00 2.69
115 116 6.982724 AGCAGAAAAGAAAAGGACAATTTGAG 59.017 34.615 2.79 0.00 0.00 3.02
116 117 6.292542 GCAGAAAAGAAAAGGACAATTTGAGC 60.293 38.462 2.79 0.00 0.00 4.26
117 118 6.201615 CAGAAAAGAAAAGGACAATTTGAGCC 59.798 38.462 2.79 4.34 0.00 4.70
118 119 5.876651 AAAGAAAAGGACAATTTGAGCCT 57.123 34.783 2.79 6.58 0.00 4.58
119 120 4.861102 AGAAAAGGACAATTTGAGCCTG 57.139 40.909 13.57 0.00 0.00 4.85
120 121 3.575687 AGAAAAGGACAATTTGAGCCTGG 59.424 43.478 13.57 0.00 0.00 4.45
121 122 2.683211 AAGGACAATTTGAGCCTGGT 57.317 45.000 13.57 0.92 0.00 4.00
122 123 2.206576 AGGACAATTTGAGCCTGGTC 57.793 50.000 12.53 0.00 0.00 4.02
123 124 1.177401 GGACAATTTGAGCCTGGTCC 58.823 55.000 2.79 0.00 38.15 4.46
124 125 1.272147 GGACAATTTGAGCCTGGTCCT 60.272 52.381 2.79 0.00 41.17 3.85
125 126 2.087646 GACAATTTGAGCCTGGTCCTC 58.912 52.381 2.79 0.00 0.00 3.71
126 127 1.707427 ACAATTTGAGCCTGGTCCTCT 59.293 47.619 2.79 0.00 0.00 3.69
127 128 2.108952 ACAATTTGAGCCTGGTCCTCTT 59.891 45.455 2.79 0.00 0.00 2.85
128 129 2.490903 CAATTTGAGCCTGGTCCTCTTG 59.509 50.000 0.00 0.00 0.00 3.02
129 130 0.250901 TTTGAGCCTGGTCCTCTTGC 60.251 55.000 0.00 0.00 0.00 4.01
130 131 1.418097 TTGAGCCTGGTCCTCTTGCA 61.418 55.000 0.00 0.00 0.00 4.08
138 139 3.243535 CCTGGTCCTCTTGCAAAAAGAAC 60.244 47.826 0.00 0.25 0.00 3.01
174 175 2.774439 GTCCAGCACGAACAATTGTT 57.226 45.000 23.49 23.49 41.64 2.83
175 176 3.078594 GTCCAGCACGAACAATTGTTT 57.921 42.857 24.02 7.47 38.56 2.83
178 179 5.038033 GTCCAGCACGAACAATTGTTTTAA 58.962 37.500 24.02 3.27 38.56 1.52
235 236 9.445786 TTTTAGAAAACAATAAACTCTCGCTTG 57.554 29.630 0.00 0.00 0.00 4.01
236 237 6.619801 AGAAAACAATAAACTCTCGCTTGT 57.380 33.333 0.00 0.00 0.00 3.16
237 238 7.027778 AGAAAACAATAAACTCTCGCTTGTT 57.972 32.000 0.00 0.00 40.65 2.83
238 239 8.149973 AGAAAACAATAAACTCTCGCTTGTTA 57.850 30.769 0.00 0.00 38.65 2.41
239 240 8.283291 AGAAAACAATAAACTCTCGCTTGTTAG 58.717 33.333 0.00 0.00 38.65 2.34
240 241 7.724305 AAACAATAAACTCTCGCTTGTTAGA 57.276 32.000 0.00 0.00 38.65 2.10
241 242 7.907214 AACAATAAACTCTCGCTTGTTAGAT 57.093 32.000 0.00 0.00 38.04 1.98
242 243 7.907214 ACAATAAACTCTCGCTTGTTAGATT 57.093 32.000 0.00 0.00 0.00 2.40
243 244 7.965045 ACAATAAACTCTCGCTTGTTAGATTC 58.035 34.615 0.00 0.00 0.00 2.52
248 249 1.324736 CTCGCTTGTTAGATTCGGTGC 59.675 52.381 0.00 0.00 0.00 5.01
320 321 7.213178 AGTTGGATTAGGGAGTAATTCACAT 57.787 36.000 0.00 0.00 36.48 3.21
322 323 6.575244 TGGATTAGGGAGTAATTCACATGT 57.425 37.500 0.00 0.00 32.36 3.21
324 325 7.506114 TGGATTAGGGAGTAATTCACATGTAC 58.494 38.462 0.00 0.00 32.36 2.90
333 334 9.915629 GGAGTAATTCACATGTACTATAAGGAG 57.084 37.037 0.00 0.00 0.00 3.69
341 342 6.040955 CACATGTACTATAAGGAGGAGAAGCA 59.959 42.308 0.00 0.00 0.00 3.91
386 387 2.291209 ACCAACATCATCACCAAGCA 57.709 45.000 0.00 0.00 0.00 3.91
396 398 6.832384 ACATCATCACCAAGCAAATAAGAGAT 59.168 34.615 0.00 0.00 0.00 2.75
399 401 8.806429 TCATCACCAAGCAAATAAGAGATTAA 57.194 30.769 0.00 0.00 0.00 1.40
403 405 9.466497 TCACCAAGCAAATAAGAGATTAATCTT 57.534 29.630 18.88 7.89 42.20 2.40
413 415 9.832445 AATAAGAGATTAATCTTAACTCGGCAA 57.168 29.630 18.88 0.00 43.21 4.52
416 418 8.371770 AGAGATTAATCTTAACTCGGCAATTC 57.628 34.615 18.88 1.98 37.25 2.17
419 421 8.831550 AGATTAATCTTAACTCGGCAATTCTTC 58.168 33.333 12.37 0.00 31.97 2.87
429 431 4.574892 TCGGCAATTCTTCATGAACTACA 58.425 39.130 3.38 0.00 37.52 2.74
431 433 4.393062 CGGCAATTCTTCATGAACTACACT 59.607 41.667 3.38 0.00 37.52 3.55
433 435 6.237942 CGGCAATTCTTCATGAACTACACTAG 60.238 42.308 3.38 0.00 37.52 2.57
436 438 5.738619 TTCTTCATGAACTACACTAGGCA 57.261 39.130 3.38 0.00 0.00 4.75
437 439 5.738619 TCTTCATGAACTACACTAGGCAA 57.261 39.130 3.38 0.00 0.00 4.52
438 440 5.724328 TCTTCATGAACTACACTAGGCAAG 58.276 41.667 3.38 0.00 0.00 4.01
439 441 4.471904 TCATGAACTACACTAGGCAAGG 57.528 45.455 0.00 0.00 0.00 3.61
440 442 4.093743 TCATGAACTACACTAGGCAAGGA 58.906 43.478 0.00 0.00 0.00 3.36
441 443 4.160439 TCATGAACTACACTAGGCAAGGAG 59.840 45.833 0.00 0.00 0.00 3.69
442 444 3.774734 TGAACTACACTAGGCAAGGAGA 58.225 45.455 0.00 0.00 0.00 3.71
443 445 4.157246 TGAACTACACTAGGCAAGGAGAA 58.843 43.478 0.00 0.00 0.00 2.87
444 446 4.220821 TGAACTACACTAGGCAAGGAGAAG 59.779 45.833 0.00 0.00 0.00 2.85
453 455 4.965200 AGGCAAGGAGAAGATACCATAC 57.035 45.455 0.00 0.00 0.00 2.39
459 461 5.615925 AGGAGAAGATACCATACAACCAC 57.384 43.478 0.00 0.00 0.00 4.16
460 462 5.030147 AGGAGAAGATACCATACAACCACA 58.970 41.667 0.00 0.00 0.00 4.17
477 479 6.592220 ACAACCACAATTGAAACTTTAACCAC 59.408 34.615 13.59 0.00 33.57 4.16
500 502 7.941238 CCACATATAGAATTTGAGAGGAACCAT 59.059 37.037 0.00 0.00 0.00 3.55
504 506 7.872113 ATAGAATTTGAGAGGAACCATCAAC 57.128 36.000 9.81 2.36 32.91 3.18
505 507 5.012893 AGAATTTGAGAGGAACCATCAACC 58.987 41.667 9.81 0.00 32.91 3.77
520 522 6.165577 ACCATCAACCATCAAATTTAGTTGC 58.834 36.000 13.55 0.00 38.13 4.17
533 535 9.897744 TCAAATTTAGTTGCTCAATCACTTAAG 57.102 29.630 0.00 0.00 0.00 1.85
542 544 5.106436 TGCTCAATCACTTAAGATGTGCTTG 60.106 40.000 10.09 6.53 40.64 4.01
582 584 5.590104 AAATTTGGCGTGCAATAAAAGAC 57.410 34.783 0.00 0.00 0.00 3.01
590 592 4.447389 GCGTGCAATAAAAGACACCAAAAT 59.553 37.500 0.00 0.00 0.00 1.82
648 650 9.929180 TGTAACAATGAGGCAGATTATATAGTC 57.071 33.333 0.00 0.00 0.00 2.59
649 651 9.077674 GTAACAATGAGGCAGATTATATAGTCG 57.922 37.037 0.06 0.00 0.00 4.18
650 652 7.468141 ACAATGAGGCAGATTATATAGTCGA 57.532 36.000 0.06 0.00 0.00 4.20
651 653 8.072321 ACAATGAGGCAGATTATATAGTCGAT 57.928 34.615 0.00 0.00 0.00 3.59
652 654 8.535335 ACAATGAGGCAGATTATATAGTCGATT 58.465 33.333 0.00 0.00 0.00 3.34
653 655 9.376075 CAATGAGGCAGATTATATAGTCGATTT 57.624 33.333 0.00 0.00 0.00 2.17
654 656 9.593134 AATGAGGCAGATTATATAGTCGATTTC 57.407 33.333 0.00 0.00 0.00 2.17
655 657 7.548097 TGAGGCAGATTATATAGTCGATTTCC 58.452 38.462 0.00 0.00 0.00 3.13
656 658 7.178451 TGAGGCAGATTATATAGTCGATTTCCA 59.822 37.037 0.00 0.00 0.00 3.53
657 659 8.083828 AGGCAGATTATATAGTCGATTTCCAT 57.916 34.615 0.00 0.00 0.00 3.41
658 660 9.201989 AGGCAGATTATATAGTCGATTTCCATA 57.798 33.333 0.00 0.00 0.00 2.74
659 661 9.817809 GGCAGATTATATAGTCGATTTCCATAA 57.182 33.333 0.00 0.00 0.00 1.90
669 671 7.596749 AGTCGATTTCCATAACTAGTTTGTG 57.403 36.000 14.49 12.75 0.00 3.33
670 672 6.594159 AGTCGATTTCCATAACTAGTTTGTGG 59.406 38.462 23.73 23.73 0.00 4.17
671 673 6.370718 GTCGATTTCCATAACTAGTTTGTGGT 59.629 38.462 26.32 15.36 32.44 4.16
672 674 7.546667 GTCGATTTCCATAACTAGTTTGTGGTA 59.453 37.037 26.32 19.62 32.44 3.25
673 675 7.762615 TCGATTTCCATAACTAGTTTGTGGTAG 59.237 37.037 26.32 18.14 32.44 3.18
674 676 7.762615 CGATTTCCATAACTAGTTTGTGGTAGA 59.237 37.037 26.32 18.28 32.44 2.59
675 677 9.444600 GATTTCCATAACTAGTTTGTGGTAGAA 57.555 33.333 26.32 21.30 32.44 2.10
676 678 9.802039 ATTTCCATAACTAGTTTGTGGTAGAAA 57.198 29.630 26.32 21.71 32.44 2.52
677 679 9.802039 TTTCCATAACTAGTTTGTGGTAGAAAT 57.198 29.630 26.32 6.90 32.44 2.17
684 686 9.930693 AACTAGTTTGTGGTAGAAATAGAGAAG 57.069 33.333 1.12 0.00 0.00 2.85
685 687 9.091220 ACTAGTTTGTGGTAGAAATAGAGAAGT 57.909 33.333 0.00 0.00 0.00 3.01
688 690 9.091220 AGTTTGTGGTAGAAATAGAGAAGTAGT 57.909 33.333 0.00 0.00 0.00 2.73
689 691 9.708092 GTTTGTGGTAGAAATAGAGAAGTAGTT 57.292 33.333 0.00 0.00 0.00 2.24
690 692 9.924650 TTTGTGGTAGAAATAGAGAAGTAGTTC 57.075 33.333 1.75 1.75 0.00 3.01
691 693 8.880991 TGTGGTAGAAATAGAGAAGTAGTTCT 57.119 34.615 12.75 12.75 46.32 3.01
692 694 9.310449 TGTGGTAGAAATAGAGAAGTAGTTCTT 57.690 33.333 14.03 7.13 43.50 2.52
693 695 9.575783 GTGGTAGAAATAGAGAAGTAGTTCTTG 57.424 37.037 14.03 0.00 43.50 3.02
694 696 8.251721 TGGTAGAAATAGAGAAGTAGTTCTTGC 58.748 37.037 14.03 2.87 43.50 4.01
695 697 7.707464 GGTAGAAATAGAGAAGTAGTTCTTGCC 59.293 40.741 14.03 5.89 43.50 4.52
696 698 7.489239 AGAAATAGAGAAGTAGTTCTTGCCT 57.511 36.000 14.03 9.27 43.50 4.75
697 699 7.327214 AGAAATAGAGAAGTAGTTCTTGCCTG 58.673 38.462 14.03 0.00 43.50 4.85
698 700 3.971245 AGAGAAGTAGTTCTTGCCTGG 57.029 47.619 14.03 0.00 43.50 4.45
699 701 3.243724 AGAGAAGTAGTTCTTGCCTGGT 58.756 45.455 14.03 0.00 43.50 4.00
700 702 3.648545 AGAGAAGTAGTTCTTGCCTGGTT 59.351 43.478 14.03 0.00 43.50 3.67
701 703 4.103311 AGAGAAGTAGTTCTTGCCTGGTTT 59.897 41.667 14.03 0.00 43.50 3.27
702 704 4.137543 AGAAGTAGTTCTTGCCTGGTTTG 58.862 43.478 7.02 0.00 40.35 2.93
703 705 3.857157 AGTAGTTCTTGCCTGGTTTGA 57.143 42.857 0.00 0.00 0.00 2.69
704 706 3.744660 AGTAGTTCTTGCCTGGTTTGAG 58.255 45.455 0.00 0.00 0.00 3.02
705 707 3.391296 AGTAGTTCTTGCCTGGTTTGAGA 59.609 43.478 0.00 0.00 0.00 3.27
706 708 3.515602 AGTTCTTGCCTGGTTTGAGAT 57.484 42.857 0.00 0.00 0.00 2.75
707 709 4.640771 AGTTCTTGCCTGGTTTGAGATA 57.359 40.909 0.00 0.00 0.00 1.98
708 710 5.184892 AGTTCTTGCCTGGTTTGAGATAT 57.815 39.130 0.00 0.00 0.00 1.63
709 711 6.313519 AGTTCTTGCCTGGTTTGAGATATA 57.686 37.500 0.00 0.00 0.00 0.86
710 712 6.352516 AGTTCTTGCCTGGTTTGAGATATAG 58.647 40.000 0.00 0.00 0.00 1.31
711 713 5.957771 TCTTGCCTGGTTTGAGATATAGT 57.042 39.130 0.00 0.00 0.00 2.12
712 714 7.125811 AGTTCTTGCCTGGTTTGAGATATAGTA 59.874 37.037 0.00 0.00 0.00 1.82
713 715 7.618019 TCTTGCCTGGTTTGAGATATAGTAT 57.382 36.000 0.00 0.00 0.00 2.12
714 716 8.721133 TCTTGCCTGGTTTGAGATATAGTATA 57.279 34.615 0.00 0.00 0.00 1.47
715 717 9.326489 TCTTGCCTGGTTTGAGATATAGTATAT 57.674 33.333 2.12 2.12 0.00 0.86
716 718 9.376075 CTTGCCTGGTTTGAGATATAGTATATG 57.624 37.037 7.41 0.00 0.00 1.78
717 719 7.851228 TGCCTGGTTTGAGATATAGTATATGG 58.149 38.462 7.41 1.08 0.00 2.74
718 720 7.678171 TGCCTGGTTTGAGATATAGTATATGGA 59.322 37.037 7.41 0.00 0.00 3.41
719 721 8.709308 GCCTGGTTTGAGATATAGTATATGGAT 58.291 37.037 7.41 0.00 0.00 3.41
722 724 8.992349 TGGTTTGAGATATAGTATATGGATGGG 58.008 37.037 7.41 0.00 0.00 4.00
723 725 8.993424 GGTTTGAGATATAGTATATGGATGGGT 58.007 37.037 7.41 0.00 0.00 4.51
796 798 9.865321 AATAATCAAAAGGAAACATCAGTCATG 57.135 29.630 0.00 0.00 38.64 3.07
798 800 6.075762 TCAAAAGGAAACATCAGTCATGTG 57.924 37.500 0.00 0.00 45.77 3.21
799 801 4.510038 AAAGGAAACATCAGTCATGTGC 57.490 40.909 0.00 0.00 45.77 4.57
800 802 3.144657 AGGAAACATCAGTCATGTGCA 57.855 42.857 0.00 0.00 45.77 4.57
801 803 3.693807 AGGAAACATCAGTCATGTGCAT 58.306 40.909 0.00 0.00 45.77 3.96
802 804 4.847198 AGGAAACATCAGTCATGTGCATA 58.153 39.130 0.00 0.00 45.77 3.14
803 805 5.255687 AGGAAACATCAGTCATGTGCATAA 58.744 37.500 0.00 0.00 45.77 1.90
804 806 5.356190 AGGAAACATCAGTCATGTGCATAAG 59.644 40.000 0.00 0.00 45.77 1.73
805 807 5.355071 GGAAACATCAGTCATGTGCATAAGA 59.645 40.000 0.00 0.00 45.77 2.10
806 808 6.127925 GGAAACATCAGTCATGTGCATAAGAA 60.128 38.462 0.00 0.00 45.77 2.52
807 809 7.400599 AAACATCAGTCATGTGCATAAGAAT 57.599 32.000 0.00 0.00 45.77 2.40
808 810 8.510243 AAACATCAGTCATGTGCATAAGAATA 57.490 30.769 0.00 0.00 45.77 1.75
809 811 8.687292 AACATCAGTCATGTGCATAAGAATAT 57.313 30.769 0.00 0.00 45.77 1.28
810 812 9.783081 AACATCAGTCATGTGCATAAGAATATA 57.217 29.630 0.00 0.00 45.77 0.86
811 813 9.955102 ACATCAGTCATGTGCATAAGAATATAT 57.045 29.630 0.00 0.00 44.70 0.86
821 823 9.875691 TGTGCATAAGAATATATAGGATGTGAC 57.124 33.333 0.00 0.00 0.00 3.67
822 824 9.875691 GTGCATAAGAATATATAGGATGTGACA 57.124 33.333 0.00 0.00 0.00 3.58
839 841 5.056480 TGTGACAATAGCCATAGGAATTCG 58.944 41.667 0.00 0.00 0.00 3.34
843 845 7.225931 GTGACAATAGCCATAGGAATTCGTTTA 59.774 37.037 5.89 0.00 0.00 2.01
845 847 6.710744 ACAATAGCCATAGGAATTCGTTTAGG 59.289 38.462 5.89 7.29 0.00 2.69
846 848 3.477530 AGCCATAGGAATTCGTTTAGGC 58.522 45.455 21.01 21.01 39.82 3.93
847 849 3.118038 AGCCATAGGAATTCGTTTAGGCA 60.118 43.478 26.01 5.18 41.88 4.75
849 851 4.278419 GCCATAGGAATTCGTTTAGGCATT 59.722 41.667 22.45 0.00 39.35 3.56
850 852 5.472137 GCCATAGGAATTCGTTTAGGCATTA 59.528 40.000 22.45 0.37 39.35 1.90
851 853 6.016610 GCCATAGGAATTCGTTTAGGCATTAA 60.017 38.462 22.45 0.00 39.35 1.40
852 854 7.469456 GCCATAGGAATTCGTTTAGGCATTAAA 60.469 37.037 22.45 0.00 39.35 1.52
853 855 8.576442 CCATAGGAATTCGTTTAGGCATTAAAT 58.424 33.333 5.89 0.00 33.99 1.40
854 856 9.398170 CATAGGAATTCGTTTAGGCATTAAATG 57.602 33.333 5.89 6.04 38.88 2.32
855 857 7.639113 AGGAATTCGTTTAGGCATTAAATGA 57.361 32.000 9.53 9.53 42.63 2.57
856 858 8.237811 AGGAATTCGTTTAGGCATTAAATGAT 57.762 30.769 12.75 3.30 43.36 2.45
857 859 9.349713 AGGAATTCGTTTAGGCATTAAATGATA 57.650 29.630 12.75 7.21 43.36 2.15
858 860 9.959749 GGAATTCGTTTAGGCATTAAATGATAA 57.040 29.630 12.75 3.71 43.36 1.75
869 871 8.980596 AGGCATTAAATGATAAAAACAGGATGA 58.019 29.630 0.00 0.00 39.69 2.92
870 872 9.034544 GGCATTAAATGATAAAAACAGGATGAC 57.965 33.333 0.00 0.00 39.69 3.06
871 873 8.745837 GCATTAAATGATAAAAACAGGATGACG 58.254 33.333 0.00 0.00 39.69 4.35
872 874 8.745837 CATTAAATGATAAAAACAGGATGACGC 58.254 33.333 0.00 0.00 39.69 5.19
873 875 5.895636 AATGATAAAAACAGGATGACGCA 57.104 34.783 0.00 0.00 39.69 5.24
874 876 6.455360 AATGATAAAAACAGGATGACGCAT 57.545 33.333 0.00 0.00 39.69 4.73
875 877 7.566760 AATGATAAAAACAGGATGACGCATA 57.433 32.000 0.00 0.00 39.69 3.14
876 878 6.993786 TGATAAAAACAGGATGACGCATAA 57.006 33.333 0.00 0.00 39.69 1.90
877 879 7.566760 TGATAAAAACAGGATGACGCATAAT 57.433 32.000 0.00 0.00 39.69 1.28
878 880 7.995289 TGATAAAAACAGGATGACGCATAATT 58.005 30.769 0.00 0.00 39.69 1.40
879 881 9.114952 TGATAAAAACAGGATGACGCATAATTA 57.885 29.630 0.00 0.00 39.69 1.40
880 882 9.944663 GATAAAAACAGGATGACGCATAATTAA 57.055 29.630 0.00 0.00 39.69 1.40
881 883 9.950680 ATAAAAACAGGATGACGCATAATTAAG 57.049 29.630 0.00 0.00 39.69 1.85
882 884 7.624360 AAAACAGGATGACGCATAATTAAGA 57.376 32.000 0.00 0.00 39.69 2.10
883 885 6.851222 AACAGGATGACGCATAATTAAGAG 57.149 37.500 0.00 0.00 39.69 2.85
903 905 6.808321 AGAGTATAATTACTTGCCTGGTCA 57.192 37.500 0.00 0.00 38.81 4.02
908 910 4.584327 AATTACTTGCCTGGTCAACAAC 57.416 40.909 0.00 0.00 0.00 3.32
916 918 3.003480 GCCTGGTCAACAACTTAGCTAG 58.997 50.000 0.00 0.00 0.00 3.42
1074 1079 3.636679 TGCTCTTCTAGTCATGGCTACT 58.363 45.455 2.01 0.00 0.00 2.57
1076 1081 3.243704 GCTCTTCTAGTCATGGCTACTGG 60.244 52.174 2.01 0.00 0.00 4.00
1120 1125 2.348666 GGTTAGTGCACTAAGTCATGCG 59.651 50.000 34.07 0.00 45.13 4.73
1121 1126 2.993899 GTTAGTGCACTAAGTCATGCGT 59.006 45.455 34.07 5.83 45.13 5.24
1122 1127 1.432514 AGTGCACTAAGTCATGCGTG 58.567 50.000 20.16 0.00 45.13 5.34
1124 1129 1.059369 GCACTAAGTCATGCGTGCG 59.941 57.895 0.00 0.00 42.55 5.34
1127 1132 1.059369 CTAAGTCATGCGTGCGTGC 59.941 57.895 9.17 5.02 33.28 5.34
1179 1184 3.006940 GTCCCGCTCATTTGTGAATACA 58.993 45.455 0.00 0.00 34.31 2.29
1305 1310 4.643387 GACCCAAGTGCAGCCCGT 62.643 66.667 0.00 0.00 0.00 5.28
1314 1319 1.073025 TGCAGCCCGTTGTGAGATT 59.927 52.632 0.00 0.00 0.00 2.40
1322 1327 1.404986 CCGTTGTGAGATTAAGGCCGA 60.405 52.381 0.00 0.00 0.00 5.54
1346 1351 4.155709 TCAATTCCCTATTGTTGTTGCCA 58.844 39.130 0.00 0.00 43.41 4.92
1351 1356 1.272212 CCTATTGTTGTTGCCACCCAC 59.728 52.381 0.00 0.00 0.00 4.61
1352 1357 1.959985 CTATTGTTGTTGCCACCCACA 59.040 47.619 0.00 0.00 0.00 4.17
1354 1359 1.198713 TTGTTGTTGCCACCCACAAT 58.801 45.000 0.14 0.00 0.00 2.71
1362 1367 0.175531 GCCACCCACAATTACATGCC 59.824 55.000 0.00 0.00 0.00 4.40
1381 1386 2.794282 GCCGCGCATGACATATGAAAAA 60.794 45.455 10.38 0.00 0.00 1.94
1427 1432 6.376299 ACATAATTCATGTGTCTTCTGCATGT 59.624 34.615 0.00 0.00 46.41 3.21
1436 1441 3.316029 TGTCTTCTGCATGTTTGGTCAAG 59.684 43.478 0.00 0.00 0.00 3.02
1440 1449 2.886523 TCTGCATGTTTGGTCAAGAAGG 59.113 45.455 0.00 0.00 0.00 3.46
1458 1467 7.346698 TCAAGAAGGATGATAAGAGGAGATTGT 59.653 37.037 0.00 0.00 0.00 2.71
1460 1469 7.507829 AGAAGGATGATAAGAGGAGATTGTTG 58.492 38.462 0.00 0.00 0.00 3.33
1461 1470 6.185114 AGGATGATAAGAGGAGATTGTTGG 57.815 41.667 0.00 0.00 0.00 3.77
1462 1471 4.759183 GGATGATAAGAGGAGATTGTTGGC 59.241 45.833 0.00 0.00 0.00 4.52
1463 1472 4.156455 TGATAAGAGGAGATTGTTGGCC 57.844 45.455 0.00 0.00 0.00 5.36
1464 1473 3.523157 TGATAAGAGGAGATTGTTGGCCA 59.477 43.478 0.00 0.00 0.00 5.36
1481 1524 6.887002 TGTTGGCCACACATATATTGAAGTAA 59.113 34.615 3.88 0.00 0.00 2.24
1501 1544 6.299141 AGTAATCTGTTCTTTGACCATGTGT 58.701 36.000 0.00 0.00 0.00 3.72
1502 1545 7.450074 AGTAATCTGTTCTTTGACCATGTGTA 58.550 34.615 0.00 0.00 0.00 2.90
1506 1549 7.581213 TCTGTTCTTTGACCATGTGTATTTT 57.419 32.000 0.00 0.00 0.00 1.82
1508 1551 8.134895 TCTGTTCTTTGACCATGTGTATTTTTC 58.865 33.333 0.00 0.00 0.00 2.29
1516 1559 8.362860 TGACCATGTGTATTTTTCACAAATTG 57.637 30.769 2.99 0.00 46.47 2.32
1517 1560 8.200120 TGACCATGTGTATTTTTCACAAATTGA 58.800 29.630 0.00 0.00 46.47 2.57
1561 1609 2.355756 CCTATCCCGCACATGTTTTCTG 59.644 50.000 0.00 0.00 0.00 3.02
1574 1625 7.222611 GCACATGTTTTCTGTGTTTGAATTACT 59.777 33.333 0.00 0.00 44.62 2.24
1584 1635 7.942341 TCTGTGTTTGAATTACTTAATGGACCT 59.058 33.333 0.00 0.00 0.00 3.85
1593 1644 7.989947 ATTACTTAATGGACCTGGTAAGAGA 57.010 36.000 12.10 2.41 0.00 3.10
1595 1646 5.342866 ACTTAATGGACCTGGTAAGAGACT 58.657 41.667 12.10 0.00 0.00 3.24
1600 1651 4.168101 TGGACCTGGTAAGAGACTTGATT 58.832 43.478 0.00 0.00 0.00 2.57
1603 1654 5.644206 GGACCTGGTAAGAGACTTGATTTTC 59.356 44.000 0.00 0.00 0.00 2.29
1608 1659 8.887717 CCTGGTAAGAGACTTGATTTTCTTATG 58.112 37.037 0.00 0.00 35.36 1.90
1639 1691 4.985538 ACTTTGCATGGAAAAGAGGTAGA 58.014 39.130 13.69 0.00 37.91 2.59
1642 1694 7.175104 ACTTTGCATGGAAAAGAGGTAGATAA 58.825 34.615 13.69 0.00 37.91 1.75
1648 1700 9.174166 GCATGGAAAAGAGGTAGATAAAAAGTA 57.826 33.333 0.00 0.00 0.00 2.24
1681 1737 8.837389 AGTAAGTTGAGATAAAGTTTGTCAACC 58.163 33.333 23.29 14.98 45.32 3.77
1682 1738 6.635030 AGTTGAGATAAAGTTTGTCAACCC 57.365 37.500 23.29 10.51 45.32 4.11
1683 1739 6.126409 AGTTGAGATAAAGTTTGTCAACCCA 58.874 36.000 23.29 11.62 45.32 4.51
1684 1740 6.605594 AGTTGAGATAAAGTTTGTCAACCCAA 59.394 34.615 23.29 15.06 45.32 4.12
1685 1741 7.123547 AGTTGAGATAAAGTTTGTCAACCCAAA 59.876 33.333 23.29 6.85 45.32 3.28
1686 1742 7.038154 TGAGATAAAGTTTGTCAACCCAAAG 57.962 36.000 13.97 0.00 35.13 2.77
1687 1743 6.831353 TGAGATAAAGTTTGTCAACCCAAAGA 59.169 34.615 13.97 0.00 35.13 2.52
1688 1744 7.505585 TGAGATAAAGTTTGTCAACCCAAAGAT 59.494 33.333 13.97 0.00 35.13 2.40
1689 1745 8.250143 AGATAAAGTTTGTCAACCCAAAGATT 57.750 30.769 13.97 0.00 35.13 2.40
1690 1746 8.143835 AGATAAAGTTTGTCAACCCAAAGATTG 58.856 33.333 13.97 0.00 35.13 2.67
1691 1747 5.675684 AAGTTTGTCAACCCAAAGATTGT 57.324 34.783 0.00 0.00 35.13 2.71
1692 1748 5.675684 AGTTTGTCAACCCAAAGATTGTT 57.324 34.783 0.00 0.00 35.13 2.83
1693 1749 6.048732 AGTTTGTCAACCCAAAGATTGTTT 57.951 33.333 0.00 0.00 35.13 2.83
1694 1750 5.874261 AGTTTGTCAACCCAAAGATTGTTTG 59.126 36.000 0.00 0.00 35.13 2.93
1695 1751 4.399004 TGTCAACCCAAAGATTGTTTGG 57.601 40.909 16.43 16.43 46.41 3.28
1696 1752 3.772025 TGTCAACCCAAAGATTGTTTGGT 59.228 39.130 20.37 8.86 45.63 3.67
1697 1753 4.119136 GTCAACCCAAAGATTGTTTGGTG 58.881 43.478 20.37 14.34 45.63 4.17
1698 1754 3.133721 TCAACCCAAAGATTGTTTGGTGG 59.866 43.478 20.37 10.95 45.63 4.61
1699 1755 2.837532 CCCAAAGATTGTTTGGTGGG 57.162 50.000 20.37 6.07 45.63 4.61
1700 1756 1.347378 CCCAAAGATTGTTTGGTGGGG 59.653 52.381 20.37 5.10 45.63 4.96
1701 1757 2.324541 CCAAAGATTGTTTGGTGGGGA 58.675 47.619 15.41 0.00 42.92 4.81
1702 1758 2.299867 CCAAAGATTGTTTGGTGGGGAG 59.700 50.000 15.41 0.00 42.92 4.30
1703 1759 2.965147 CAAAGATTGTTTGGTGGGGAGT 59.035 45.455 0.00 0.00 0.00 3.85
1704 1760 2.292828 AGATTGTTTGGTGGGGAGTG 57.707 50.000 0.00 0.00 0.00 3.51
1705 1761 1.780309 AGATTGTTTGGTGGGGAGTGA 59.220 47.619 0.00 0.00 0.00 3.41
1706 1762 2.379907 AGATTGTTTGGTGGGGAGTGAT 59.620 45.455 0.00 0.00 0.00 3.06
1707 1763 3.591527 AGATTGTTTGGTGGGGAGTGATA 59.408 43.478 0.00 0.00 0.00 2.15
1708 1764 2.871096 TGTTTGGTGGGGAGTGATAC 57.129 50.000 0.00 0.00 0.00 2.24
1709 1765 2.058705 TGTTTGGTGGGGAGTGATACA 58.941 47.619 0.00 0.00 0.00 2.29
1710 1766 2.443632 TGTTTGGTGGGGAGTGATACAA 59.556 45.455 0.00 0.00 0.00 2.41
1711 1767 3.075283 TGTTTGGTGGGGAGTGATACAAT 59.925 43.478 0.00 0.00 0.00 2.71
1712 1768 3.644966 TTGGTGGGGAGTGATACAATC 57.355 47.619 0.00 0.00 0.00 2.67
1713 1769 1.484653 TGGTGGGGAGTGATACAATCG 59.515 52.381 0.00 0.00 28.47 3.34
1714 1770 1.760613 GGTGGGGAGTGATACAATCGA 59.239 52.381 0.00 0.00 28.47 3.59
1715 1771 2.368875 GGTGGGGAGTGATACAATCGAT 59.631 50.000 0.00 0.00 28.47 3.59
1716 1772 3.555168 GGTGGGGAGTGATACAATCGATC 60.555 52.174 0.00 0.00 28.47 3.69
1717 1773 3.322254 GTGGGGAGTGATACAATCGATCT 59.678 47.826 0.00 0.00 28.47 2.75
1718 1774 3.574396 TGGGGAGTGATACAATCGATCTC 59.426 47.826 0.00 0.00 28.47 2.75
1719 1775 3.574396 GGGGAGTGATACAATCGATCTCA 59.426 47.826 0.00 0.00 28.47 3.27
1720 1776 4.039245 GGGGAGTGATACAATCGATCTCAA 59.961 45.833 0.00 0.00 28.47 3.02
1721 1777 5.279708 GGGGAGTGATACAATCGATCTCAAT 60.280 44.000 0.00 0.00 28.47 2.57
1722 1778 5.636965 GGGAGTGATACAATCGATCTCAATG 59.363 44.000 0.00 0.00 28.47 2.82
1723 1779 6.219473 GGAGTGATACAATCGATCTCAATGT 58.781 40.000 0.00 1.15 28.47 2.71
1724 1780 6.703607 GGAGTGATACAATCGATCTCAATGTT 59.296 38.462 0.00 0.00 28.47 2.71
1725 1781 7.867909 GGAGTGATACAATCGATCTCAATGTTA 59.132 37.037 0.00 0.00 28.47 2.41
1726 1782 9.249457 GAGTGATACAATCGATCTCAATGTTAA 57.751 33.333 0.00 0.00 0.00 2.01
1727 1783 9.254133 AGTGATACAATCGATCTCAATGTTAAG 57.746 33.333 0.00 0.00 0.00 1.85
1728 1784 9.035607 GTGATACAATCGATCTCAATGTTAAGT 57.964 33.333 0.00 0.00 0.00 2.24
1738 1976 7.383572 CGATCTCAATGTTAAGTATCAAGAGGG 59.616 40.741 0.00 0.00 0.00 4.30
1743 2057 5.174037 TGTTAAGTATCAAGAGGGTTGGG 57.826 43.478 0.00 0.00 0.00 4.12
1750 2064 7.226059 AGTATCAAGAGGGTTGGGATTAAAT 57.774 36.000 0.00 0.00 0.00 1.40
1752 2066 8.218488 AGTATCAAGAGGGTTGGGATTAAATAC 58.782 37.037 0.00 0.00 0.00 1.89
1753 2067 6.652205 TCAAGAGGGTTGGGATTAAATACT 57.348 37.500 0.00 0.00 0.00 2.12
1799 2113 6.496218 TGTGATGATCTACAATGGCTAGATCT 59.504 38.462 17.37 0.00 43.75 2.75
1800 2114 7.035004 GTGATGATCTACAATGGCTAGATCTC 58.965 42.308 17.37 13.59 43.75 2.75
1811 2130 5.735285 TGGCTAGATCTCAATGTAGGATG 57.265 43.478 0.00 0.00 31.07 3.51
1818 2137 6.262980 AGATCTCAATGTAGGATGGCTAGAT 58.737 40.000 0.00 0.00 0.00 1.98
1824 2143 9.814899 CTCAATGTAGGATGGCTAGATTTATAG 57.185 37.037 0.00 0.00 0.00 1.31
1825 2144 9.326489 TCAATGTAGGATGGCTAGATTTATAGT 57.674 33.333 0.00 0.00 0.00 2.12
1829 2148 5.415961 AGGATGGCTAGATTTATAGTGGGT 58.584 41.667 0.00 0.00 0.00 4.51
1836 2155 6.826741 GGCTAGATTTATAGTGGGTTGTCAAA 59.173 38.462 0.00 0.00 0.00 2.69
1849 2168 4.383661 GGGTTGTCAAAATTCCAACAGGTT 60.384 41.667 0.00 0.00 40.10 3.50
1851 2170 5.064579 GGTTGTCAAAATTCCAACAGGTTTG 59.935 40.000 0.00 0.00 40.10 2.93
1852 2171 4.764172 TGTCAAAATTCCAACAGGTTTGG 58.236 39.130 0.00 0.00 40.87 3.28
1861 2180 3.053544 TCCAACAGGTTTGGTAAAGGACA 60.054 43.478 3.04 0.00 40.40 4.02
1867 2186 3.396611 AGGTTTGGTAAAGGACAGGCTTA 59.603 43.478 0.00 0.00 0.00 3.09
1868 2187 4.141111 AGGTTTGGTAAAGGACAGGCTTAA 60.141 41.667 0.00 0.00 0.00 1.85
1893 2212 1.007038 CGAACGTTCGTTGGGGAGA 60.007 57.895 35.92 0.00 45.09 3.71
1908 2227 1.469767 GGGAGAATGGCAAATGCGAAC 60.470 52.381 0.00 0.00 43.26 3.95
1918 2237 3.670991 GGCAAATGCGAACGTTTTTCATA 59.329 39.130 0.46 0.00 43.26 2.15
1926 2245 5.116377 TGCGAACGTTTTTCATAGCAATTTC 59.884 36.000 0.46 0.00 0.00 2.17
1931 2250 8.419076 AACGTTTTTCATAGCAATTTCTGTTT 57.581 26.923 0.00 0.00 0.00 2.83
1932 2251 8.061125 ACGTTTTTCATAGCAATTTCTGTTTC 57.939 30.769 0.00 0.00 0.00 2.78
1933 2252 7.920682 ACGTTTTTCATAGCAATTTCTGTTTCT 59.079 29.630 0.00 0.00 0.00 2.52
1934 2253 8.755018 CGTTTTTCATAGCAATTTCTGTTTCTT 58.245 29.630 0.00 0.00 0.00 2.52
1943 2262 5.279156 GCAATTTCTGTTTCTTGAGGATGGT 60.279 40.000 0.00 0.00 0.00 3.55
1946 2265 8.359642 CAATTTCTGTTTCTTGAGGATGGTAAA 58.640 33.333 0.00 0.00 0.00 2.01
1964 2283 6.862209 TGGTAAATTTAGTTAGCAAGCATGG 58.138 36.000 0.00 0.00 38.25 3.66
1965 2284 6.435904 TGGTAAATTTAGTTAGCAAGCATGGT 59.564 34.615 0.00 0.00 38.25 3.55
1967 2286 8.463607 GGTAAATTTAGTTAGCAAGCATGGTAA 58.536 33.333 9.35 9.35 44.80 2.85
1980 2299 3.642938 TGGTAAATCCAGCGCAGTT 57.357 47.368 11.47 0.00 41.93 3.16
1981 2300 1.448985 TGGTAAATCCAGCGCAGTTC 58.551 50.000 11.47 0.00 41.93 3.01
1982 2301 1.271108 TGGTAAATCCAGCGCAGTTCA 60.271 47.619 11.47 0.00 41.93 3.18
1983 2302 1.810151 GGTAAATCCAGCGCAGTTCAA 59.190 47.619 11.47 0.00 35.97 2.69
1984 2303 2.423538 GGTAAATCCAGCGCAGTTCAAT 59.576 45.455 11.47 0.00 35.97 2.57
1988 2307 2.704725 TCCAGCGCAGTTCAATTTTC 57.295 45.000 11.47 0.00 0.00 2.29
1991 2310 2.287788 CCAGCGCAGTTCAATTTTCTGT 60.288 45.455 11.47 0.00 0.00 3.41
2002 2321 6.041296 AGTTCAATTTTCTGTCAGGATTTGCT 59.959 34.615 0.00 0.00 0.00 3.91
2003 2322 5.775686 TCAATTTTCTGTCAGGATTTGCTG 58.224 37.500 0.00 0.00 0.00 4.41
2020 2339 4.589216 TGCTGTGCTTGCTAAAAGAAAT 57.411 36.364 0.00 0.00 0.00 2.17
2023 2342 5.463061 TGCTGTGCTTGCTAAAAGAAATTTC 59.537 36.000 10.33 10.33 32.27 2.17
2024 2343 5.107337 GCTGTGCTTGCTAAAAGAAATTTCC 60.107 40.000 14.61 0.00 32.27 3.13
2025 2344 5.911752 TGTGCTTGCTAAAAGAAATTTCCA 58.088 33.333 14.61 1.72 32.27 3.53
2026 2345 6.523840 TGTGCTTGCTAAAAGAAATTTCCAT 58.476 32.000 14.61 1.43 32.27 3.41
2027 2346 6.646240 TGTGCTTGCTAAAAGAAATTTCCATC 59.354 34.615 14.61 0.00 32.27 3.51
2028 2347 6.091305 GTGCTTGCTAAAAGAAATTTCCATCC 59.909 38.462 14.61 0.21 32.27 3.51
2029 2348 5.289434 GCTTGCTAAAAGAAATTTCCATCCG 59.711 40.000 14.61 2.76 32.27 4.18
2030 2349 5.975693 TGCTAAAAGAAATTTCCATCCGT 57.024 34.783 14.61 0.00 32.27 4.69
2031 2350 5.708948 TGCTAAAAGAAATTTCCATCCGTG 58.291 37.500 14.61 1.52 32.27 4.94
2032 2351 5.242838 TGCTAAAAGAAATTTCCATCCGTGT 59.757 36.000 14.61 0.00 32.27 4.49
2033 2352 5.572896 GCTAAAAGAAATTTCCATCCGTGTG 59.427 40.000 14.61 0.00 32.27 3.82
2034 2353 5.782893 AAAAGAAATTTCCATCCGTGTGA 57.217 34.783 14.61 0.00 0.00 3.58
2035 2354 4.766404 AAGAAATTTCCATCCGTGTGAC 57.234 40.909 14.61 0.00 0.00 3.67
2036 2355 3.750371 AGAAATTTCCATCCGTGTGACA 58.250 40.909 14.61 0.00 0.00 3.58
2037 2356 4.141287 AGAAATTTCCATCCGTGTGACAA 58.859 39.130 14.61 0.00 0.00 3.18
2038 2357 4.766891 AGAAATTTCCATCCGTGTGACAAT 59.233 37.500 14.61 0.00 0.00 2.71
2039 2358 5.243730 AGAAATTTCCATCCGTGTGACAATT 59.756 36.000 14.61 0.00 0.00 2.32
2040 2359 5.467035 AATTTCCATCCGTGTGACAATTT 57.533 34.783 0.00 0.00 0.00 1.82
2041 2360 6.582677 AATTTCCATCCGTGTGACAATTTA 57.417 33.333 0.00 0.00 0.00 1.40
2042 2361 6.582677 ATTTCCATCCGTGTGACAATTTAA 57.417 33.333 0.00 0.00 0.00 1.52
2043 2362 6.392625 TTTCCATCCGTGTGACAATTTAAA 57.607 33.333 0.00 0.00 0.00 1.52
2044 2363 6.582677 TTCCATCCGTGTGACAATTTAAAT 57.417 33.333 0.00 0.00 0.00 1.40
2045 2364 6.582677 TCCATCCGTGTGACAATTTAAATT 57.417 33.333 7.64 7.64 0.00 1.82
2078 2397 7.951530 AAACATTCAATTTGTCATTCTGTCC 57.048 32.000 0.00 0.00 0.00 4.02
2079 2398 6.653526 ACATTCAATTTGTCATTCTGTCCA 57.346 33.333 0.00 0.00 0.00 4.02
2083 2402 4.583907 TCAATTTGTCATTCTGTCCAAGCA 59.416 37.500 0.00 0.00 0.00 3.91
2090 2409 2.031258 TTCTGTCCAAGCAAACGTCA 57.969 45.000 0.00 0.00 0.00 4.35
2093 2412 0.746204 TGTCCAAGCAAACGTCAGCA 60.746 50.000 13.67 0.00 0.00 4.41
2129 2448 0.896923 TGGTAAATCCGTACGCACCT 59.103 50.000 10.49 0.00 39.52 4.00
2141 2460 2.209838 ACGCACCTATGACGAATCAG 57.790 50.000 0.00 0.00 38.57 2.90
2143 2462 1.221414 GCACCTATGACGAATCAGGC 58.779 55.000 0.00 0.00 38.57 4.85
2144 2463 1.871080 CACCTATGACGAATCAGGCC 58.129 55.000 0.00 0.00 38.57 5.19
2145 2464 1.138859 CACCTATGACGAATCAGGCCA 59.861 52.381 5.01 0.00 38.57 5.36
2181 2500 8.330302 GTTTTGTTTGAAATGAAATCAGGAGTG 58.670 33.333 0.00 0.00 0.00 3.51
2182 2501 6.713762 TGTTTGAAATGAAATCAGGAGTGT 57.286 33.333 0.00 0.00 0.00 3.55
2189 2508 3.668447 TGAAATCAGGAGTGTGAGCTTC 58.332 45.455 0.00 0.00 0.00 3.86
2197 2516 2.323959 GAGTGTGAGCTTCTCAACTCG 58.676 52.381 15.91 0.00 42.46 4.18
2200 2519 0.603569 GTGAGCTTCTCAACTCGGGA 59.396 55.000 0.00 0.00 42.46 5.14
2281 2601 0.744414 TAGGCTGGTGCGCTCATTTC 60.744 55.000 9.73 0.00 40.82 2.17
2287 2607 2.358615 TGCGCTCATTTCGGCTGT 60.359 55.556 9.73 0.00 0.00 4.40
2290 2610 1.911293 GCGCTCATTTCGGCTGTGAA 61.911 55.000 0.00 0.00 0.00 3.18
2293 2613 1.202222 GCTCATTTCGGCTGTGAATGG 60.202 52.381 17.98 12.50 0.00 3.16
2306 2626 0.107214 TGAATGGACGGCCTGGATTC 60.107 55.000 9.82 10.63 34.31 2.52
2326 2646 2.169769 TCACTCCATCCGTATGTTTCCC 59.830 50.000 0.00 0.00 0.00 3.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 9.939802 ACAATTTATCTTCTTACCGTTTAGTCT 57.060 29.630 0.00 0.00 0.00 3.24
24 25 9.893305 CTCAAAACAATTTATCTTCTTACCGTT 57.107 29.630 0.00 0.00 0.00 4.44
25 26 9.280174 TCTCAAAACAATTTATCTTCTTACCGT 57.720 29.630 0.00 0.00 0.00 4.83
31 32 9.956720 CACAGTTCTCAAAACAATTTATCTTCT 57.043 29.630 0.00 0.00 0.00 2.85
32 33 9.950680 TCACAGTTCTCAAAACAATTTATCTTC 57.049 29.630 0.00 0.00 0.00 2.87
33 34 9.736023 GTCACAGTTCTCAAAACAATTTATCTT 57.264 29.630 0.00 0.00 0.00 2.40
34 35 9.125026 AGTCACAGTTCTCAAAACAATTTATCT 57.875 29.630 0.00 0.00 0.00 1.98
35 36 9.736023 AAGTCACAGTTCTCAAAACAATTTATC 57.264 29.630 0.00 0.00 0.00 1.75
37 38 9.567848 GAAAGTCACAGTTCTCAAAACAATTTA 57.432 29.630 0.00 0.00 0.00 1.40
38 39 8.306761 AGAAAGTCACAGTTCTCAAAACAATTT 58.693 29.630 0.00 0.00 27.52 1.82
39 40 7.830739 AGAAAGTCACAGTTCTCAAAACAATT 58.169 30.769 0.00 0.00 27.52 2.32
40 41 7.396540 AGAAAGTCACAGTTCTCAAAACAAT 57.603 32.000 0.00 0.00 27.52 2.71
41 42 6.817765 AGAAAGTCACAGTTCTCAAAACAA 57.182 33.333 0.00 0.00 27.52 2.83
42 43 6.817765 AAGAAAGTCACAGTTCTCAAAACA 57.182 33.333 0.00 0.00 32.90 2.83
43 44 7.530863 AGAAAGAAAGTCACAGTTCTCAAAAC 58.469 34.615 0.00 0.00 32.90 2.43
44 45 7.607991 AGAGAAAGAAAGTCACAGTTCTCAAAA 59.392 33.333 12.33 0.00 42.12 2.44
45 46 7.106239 AGAGAAAGAAAGTCACAGTTCTCAAA 58.894 34.615 12.33 0.00 42.12 2.69
46 47 6.644347 AGAGAAAGAAAGTCACAGTTCTCAA 58.356 36.000 12.33 0.00 42.12 3.02
47 48 6.127338 TGAGAGAAAGAAAGTCACAGTTCTCA 60.127 38.462 12.33 3.15 42.12 3.27
48 49 6.276847 TGAGAGAAAGAAAGTCACAGTTCTC 58.723 40.000 0.00 0.00 40.71 2.87
49 50 6.227298 TGAGAGAAAGAAAGTCACAGTTCT 57.773 37.500 0.00 0.00 35.59 3.01
50 51 6.758886 TCTTGAGAGAAAGAAAGTCACAGTTC 59.241 38.462 0.00 0.00 33.25 3.01
51 52 6.644347 TCTTGAGAGAAAGAAAGTCACAGTT 58.356 36.000 0.00 0.00 33.25 3.16
52 53 6.227298 TCTTGAGAGAAAGAAAGTCACAGT 57.773 37.500 0.00 0.00 33.25 3.55
53 54 6.202570 CCTTCTTGAGAGAAAGAAAGTCACAG 59.797 42.308 1.48 0.00 43.67 3.66
54 55 6.051717 CCTTCTTGAGAGAAAGAAAGTCACA 58.948 40.000 1.48 0.00 43.67 3.58
55 56 6.284459 TCCTTCTTGAGAGAAAGAAAGTCAC 58.716 40.000 1.48 0.00 43.67 3.67
56 57 6.485830 TCCTTCTTGAGAGAAAGAAAGTCA 57.514 37.500 1.48 0.00 43.67 3.41
57 58 7.793927 TTTCCTTCTTGAGAGAAAGAAAGTC 57.206 36.000 8.21 0.00 42.84 3.01
58 59 8.581253 TTTTTCCTTCTTGAGAGAAAGAAAGT 57.419 30.769 10.87 0.00 45.74 2.66
66 67 8.787852 GCTTTTCTATTTTTCCTTCTTGAGAGA 58.212 33.333 0.00 0.00 0.00 3.10
67 68 8.571336 TGCTTTTCTATTTTTCCTTCTTGAGAG 58.429 33.333 0.00 0.00 0.00 3.20
68 69 8.463930 TGCTTTTCTATTTTTCCTTCTTGAGA 57.536 30.769 0.00 0.00 0.00 3.27
69 70 8.571336 TCTGCTTTTCTATTTTTCCTTCTTGAG 58.429 33.333 0.00 0.00 0.00 3.02
70 71 8.463930 TCTGCTTTTCTATTTTTCCTTCTTGA 57.536 30.769 0.00 0.00 0.00 3.02
71 72 9.533253 TTTCTGCTTTTCTATTTTTCCTTCTTG 57.467 29.630 0.00 0.00 0.00 3.02
73 74 9.755804 CTTTTCTGCTTTTCTATTTTTCCTTCT 57.244 29.630 0.00 0.00 0.00 2.85
74 75 9.750125 TCTTTTCTGCTTTTCTATTTTTCCTTC 57.250 29.630 0.00 0.00 0.00 3.46
81 82 9.534565 GTCCTTTTCTTTTCTGCTTTTCTATTT 57.465 29.630 0.00 0.00 0.00 1.40
82 83 8.695456 TGTCCTTTTCTTTTCTGCTTTTCTATT 58.305 29.630 0.00 0.00 0.00 1.73
83 84 8.237811 TGTCCTTTTCTTTTCTGCTTTTCTAT 57.762 30.769 0.00 0.00 0.00 1.98
84 85 7.639113 TGTCCTTTTCTTTTCTGCTTTTCTA 57.361 32.000 0.00 0.00 0.00 2.10
85 86 6.530019 TGTCCTTTTCTTTTCTGCTTTTCT 57.470 33.333 0.00 0.00 0.00 2.52
86 87 7.776933 ATTGTCCTTTTCTTTTCTGCTTTTC 57.223 32.000 0.00 0.00 0.00 2.29
87 88 8.453320 CAAATTGTCCTTTTCTTTTCTGCTTTT 58.547 29.630 0.00 0.00 0.00 2.27
88 89 7.823799 TCAAATTGTCCTTTTCTTTTCTGCTTT 59.176 29.630 0.00 0.00 0.00 3.51
89 90 7.330262 TCAAATTGTCCTTTTCTTTTCTGCTT 58.670 30.769 0.00 0.00 0.00 3.91
90 91 6.877236 TCAAATTGTCCTTTTCTTTTCTGCT 58.123 32.000 0.00 0.00 0.00 4.24
91 92 6.292542 GCTCAAATTGTCCTTTTCTTTTCTGC 60.293 38.462 0.00 0.00 0.00 4.26
92 93 6.201615 GGCTCAAATTGTCCTTTTCTTTTCTG 59.798 38.462 0.00 0.00 0.00 3.02
93 94 6.098838 AGGCTCAAATTGTCCTTTTCTTTTCT 59.901 34.615 4.31 0.00 0.00 2.52
94 95 6.201615 CAGGCTCAAATTGTCCTTTTCTTTTC 59.798 38.462 6.77 0.00 0.00 2.29
95 96 6.051074 CAGGCTCAAATTGTCCTTTTCTTTT 58.949 36.000 6.77 0.00 0.00 2.27
96 97 5.453762 CCAGGCTCAAATTGTCCTTTTCTTT 60.454 40.000 6.77 0.00 0.00 2.52
97 98 4.039609 CCAGGCTCAAATTGTCCTTTTCTT 59.960 41.667 6.77 0.00 0.00 2.52
98 99 3.575687 CCAGGCTCAAATTGTCCTTTTCT 59.424 43.478 6.77 0.00 0.00 2.52
99 100 3.321968 ACCAGGCTCAAATTGTCCTTTTC 59.678 43.478 6.77 0.00 0.00 2.29
100 101 3.308401 ACCAGGCTCAAATTGTCCTTTT 58.692 40.909 6.77 0.00 0.00 2.27
101 102 2.893489 GACCAGGCTCAAATTGTCCTTT 59.107 45.455 6.77 0.00 0.00 3.11
102 103 2.519013 GACCAGGCTCAAATTGTCCTT 58.481 47.619 6.77 0.00 0.00 3.36
103 104 1.272147 GGACCAGGCTCAAATTGTCCT 60.272 52.381 0.00 4.31 39.30 3.85
104 105 1.177401 GGACCAGGCTCAAATTGTCC 58.823 55.000 0.00 0.00 35.91 4.02
105 106 2.087646 GAGGACCAGGCTCAAATTGTC 58.912 52.381 0.00 0.00 0.00 3.18
106 107 1.707427 AGAGGACCAGGCTCAAATTGT 59.293 47.619 0.00 0.00 0.00 2.71
107 108 2.490903 CAAGAGGACCAGGCTCAAATTG 59.509 50.000 0.00 0.00 0.00 2.32
108 109 2.800250 CAAGAGGACCAGGCTCAAATT 58.200 47.619 0.00 0.00 0.00 1.82
109 110 1.615384 GCAAGAGGACCAGGCTCAAAT 60.615 52.381 0.00 0.00 0.00 2.32
110 111 0.250901 GCAAGAGGACCAGGCTCAAA 60.251 55.000 0.00 0.00 0.00 2.69
111 112 1.376466 GCAAGAGGACCAGGCTCAA 59.624 57.895 0.00 0.00 0.00 3.02
112 113 1.418097 TTGCAAGAGGACCAGGCTCA 61.418 55.000 0.00 0.00 0.00 4.26
113 114 0.250901 TTTGCAAGAGGACCAGGCTC 60.251 55.000 0.00 0.00 0.00 4.70
114 115 0.185901 TTTTGCAAGAGGACCAGGCT 59.814 50.000 0.00 0.00 0.00 4.58
115 116 1.000171 CTTTTTGCAAGAGGACCAGGC 60.000 52.381 0.00 0.00 0.00 4.85
116 117 2.586425 TCTTTTTGCAAGAGGACCAGG 58.414 47.619 0.00 0.00 0.00 4.45
117 118 3.381272 TGTTCTTTTTGCAAGAGGACCAG 59.619 43.478 16.42 1.23 0.00 4.00
118 119 3.360867 TGTTCTTTTTGCAAGAGGACCA 58.639 40.909 16.42 7.79 0.00 4.02
119 120 4.112634 GTTGTTCTTTTTGCAAGAGGACC 58.887 43.478 16.42 5.52 0.00 4.46
120 121 4.743493 TGTTGTTCTTTTTGCAAGAGGAC 58.257 39.130 13.63 13.63 0.00 3.85
121 122 5.398603 TTGTTGTTCTTTTTGCAAGAGGA 57.601 34.783 0.00 0.00 0.00 3.71
122 123 7.202526 TCTATTGTTGTTCTTTTTGCAAGAGG 58.797 34.615 0.00 0.00 0.00 3.69
123 124 8.807667 ATCTATTGTTGTTCTTTTTGCAAGAG 57.192 30.769 0.00 2.28 0.00 2.85
138 139 7.345192 GTGCTGGACGTATTTATCTATTGTTG 58.655 38.462 0.00 0.00 0.00 3.33
155 156 2.774439 AACAATTGTTCGTGCTGGAC 57.226 45.000 18.13 0.00 31.64 4.02
175 176 8.919145 CCCAAATAGTAGGCCATTATGTTTTAA 58.081 33.333 5.01 0.00 0.00 1.52
178 179 5.838521 CCCCAAATAGTAGGCCATTATGTTT 59.161 40.000 5.01 0.00 0.00 2.83
187 188 1.519498 AGGTCCCCAAATAGTAGGCC 58.481 55.000 0.00 0.00 0.00 5.19
226 227 2.854777 CACCGAATCTAACAAGCGAGAG 59.145 50.000 0.00 0.00 0.00 3.20
227 228 2.876091 CACCGAATCTAACAAGCGAGA 58.124 47.619 0.00 0.00 0.00 4.04
231 232 2.346803 TCAGCACCGAATCTAACAAGC 58.653 47.619 0.00 0.00 0.00 4.01
232 233 3.745975 TGTTCAGCACCGAATCTAACAAG 59.254 43.478 0.00 0.00 0.00 3.16
235 236 3.496884 TGTTGTTCAGCACCGAATCTAAC 59.503 43.478 0.00 0.00 0.00 2.34
236 237 3.734463 TGTTGTTCAGCACCGAATCTAA 58.266 40.909 0.00 0.00 0.00 2.10
237 238 3.394674 TGTTGTTCAGCACCGAATCTA 57.605 42.857 0.00 0.00 0.00 1.98
238 239 2.254546 TGTTGTTCAGCACCGAATCT 57.745 45.000 0.00 0.00 0.00 2.40
239 240 3.559238 ATTGTTGTTCAGCACCGAATC 57.441 42.857 0.00 0.00 0.00 2.52
240 241 3.569701 AGAATTGTTGTTCAGCACCGAAT 59.430 39.130 0.00 0.00 0.00 3.34
241 242 2.948979 AGAATTGTTGTTCAGCACCGAA 59.051 40.909 0.00 0.00 0.00 4.30
242 243 2.571212 AGAATTGTTGTTCAGCACCGA 58.429 42.857 0.00 0.00 0.00 4.69
243 244 3.354089 AAGAATTGTTGTTCAGCACCG 57.646 42.857 0.00 0.00 0.00 4.94
248 249 9.817365 CATGTTACTCTAAGAATTGTTGTTCAG 57.183 33.333 0.00 0.00 0.00 3.02
293 294 8.044908 TGTGAATTACTCCCTAATCCAACTAAC 58.955 37.037 0.00 0.00 0.00 2.34
294 295 8.153221 TGTGAATTACTCCCTAATCCAACTAA 57.847 34.615 0.00 0.00 0.00 2.24
297 298 6.828785 ACATGTGAATTACTCCCTAATCCAAC 59.171 38.462 0.00 0.00 0.00 3.77
308 309 9.915629 CCTCCTTATAGTACATGTGAATTACTC 57.084 37.037 9.11 0.00 0.00 2.59
309 310 9.656323 TCCTCCTTATAGTACATGTGAATTACT 57.344 33.333 9.11 6.01 0.00 2.24
320 321 5.516044 TGTGCTTCTCCTCCTTATAGTACA 58.484 41.667 0.00 0.00 0.00 2.90
322 323 7.490657 TTTTGTGCTTCTCCTCCTTATAGTA 57.509 36.000 0.00 0.00 0.00 1.82
357 358 8.375608 TGGTGATGATGTTGGTAAAAATTTTG 57.624 30.769 3.73 0.00 0.00 2.44
362 363 5.069648 TGCTTGGTGATGATGTTGGTAAAAA 59.930 36.000 0.00 0.00 0.00 1.94
366 367 3.431673 TGCTTGGTGATGATGTTGGTA 57.568 42.857 0.00 0.00 0.00 3.25
386 387 9.832445 TGCCGAGTTAAGATTAATCTCTTATTT 57.168 29.630 18.19 4.52 37.52 1.40
396 398 7.915293 TGAAGAATTGCCGAGTTAAGATTAA 57.085 32.000 0.00 0.00 0.00 1.40
399 401 6.115446 TCATGAAGAATTGCCGAGTTAAGAT 58.885 36.000 0.00 0.00 0.00 2.40
403 405 5.245531 AGTTCATGAAGAATTGCCGAGTTA 58.754 37.500 8.80 0.00 38.76 2.24
413 415 6.299805 TGCCTAGTGTAGTTCATGAAGAAT 57.700 37.500 8.80 0.57 38.76 2.40
414 416 5.738619 TGCCTAGTGTAGTTCATGAAGAA 57.261 39.130 8.80 0.00 0.00 2.52
416 418 4.872691 CCTTGCCTAGTGTAGTTCATGAAG 59.127 45.833 8.80 0.00 0.00 3.02
419 421 4.160439 TCTCCTTGCCTAGTGTAGTTCATG 59.840 45.833 0.00 0.00 0.00 3.07
429 431 3.995636 TGGTATCTTCTCCTTGCCTAGT 58.004 45.455 0.00 0.00 0.00 2.57
431 433 5.464069 TGTATGGTATCTTCTCCTTGCCTA 58.536 41.667 0.00 0.00 0.00 3.93
433 435 4.689612 TGTATGGTATCTTCTCCTTGCC 57.310 45.455 0.00 0.00 0.00 4.52
436 438 5.487488 TGTGGTTGTATGGTATCTTCTCCTT 59.513 40.000 0.00 0.00 0.00 3.36
437 439 5.030147 TGTGGTTGTATGGTATCTTCTCCT 58.970 41.667 0.00 0.00 0.00 3.69
438 440 5.353394 TGTGGTTGTATGGTATCTTCTCC 57.647 43.478 0.00 0.00 0.00 3.71
439 441 7.552687 TCAATTGTGGTTGTATGGTATCTTCTC 59.447 37.037 5.13 0.00 0.00 2.87
440 442 7.402054 TCAATTGTGGTTGTATGGTATCTTCT 58.598 34.615 5.13 0.00 0.00 2.85
441 443 7.624360 TCAATTGTGGTTGTATGGTATCTTC 57.376 36.000 5.13 0.00 0.00 2.87
442 444 8.303876 GTTTCAATTGTGGTTGTATGGTATCTT 58.696 33.333 5.13 0.00 0.00 2.40
443 445 7.669722 AGTTTCAATTGTGGTTGTATGGTATCT 59.330 33.333 5.13 0.00 0.00 1.98
444 446 7.826690 AGTTTCAATTGTGGTTGTATGGTATC 58.173 34.615 5.13 0.00 0.00 2.24
453 455 6.591834 TGTGGTTAAAGTTTCAATTGTGGTTG 59.408 34.615 5.13 0.00 0.00 3.77
477 479 9.565090 TTGATGGTTCCTCTCAAATTCTATATG 57.435 33.333 5.44 0.00 0.00 1.78
483 485 4.766891 TGGTTGATGGTTCCTCTCAAATTC 59.233 41.667 8.26 4.44 31.21 2.17
493 495 6.935167 ACTAAATTTGATGGTTGATGGTTCC 58.065 36.000 0.00 0.00 0.00 3.62
500 502 6.647334 TGAGCAACTAAATTTGATGGTTGA 57.353 33.333 21.07 7.51 39.39 3.18
504 506 7.318141 AGTGATTGAGCAACTAAATTTGATGG 58.682 34.615 0.00 0.00 0.00 3.51
505 507 8.752766 AAGTGATTGAGCAACTAAATTTGATG 57.247 30.769 0.00 0.00 0.00 3.07
532 534 8.571461 TCTCTGATTTTATTTCAAGCACATCT 57.429 30.769 0.00 0.00 0.00 2.90
533 535 9.798994 AATCTCTGATTTTATTTCAAGCACATC 57.201 29.630 0.00 0.00 0.00 3.06
555 557 7.816995 TCTTTTATTGCACGCCAAATTTAATCT 59.183 29.630 0.00 0.00 36.92 2.40
622 624 9.929180 GACTATATAATCTGCCTCATTGTTACA 57.071 33.333 0.00 0.00 0.00 2.41
623 625 9.077674 CGACTATATAATCTGCCTCATTGTTAC 57.922 37.037 0.00 0.00 0.00 2.50
624 626 9.020731 TCGACTATATAATCTGCCTCATTGTTA 57.979 33.333 0.00 0.00 0.00 2.41
625 627 7.896811 TCGACTATATAATCTGCCTCATTGTT 58.103 34.615 0.00 0.00 0.00 2.83
626 628 7.468141 TCGACTATATAATCTGCCTCATTGT 57.532 36.000 0.00 0.00 0.00 2.71
627 629 8.939201 AATCGACTATATAATCTGCCTCATTG 57.061 34.615 0.00 0.00 0.00 2.82
628 630 9.593134 GAAATCGACTATATAATCTGCCTCATT 57.407 33.333 0.00 0.00 0.00 2.57
629 631 8.200792 GGAAATCGACTATATAATCTGCCTCAT 58.799 37.037 0.00 0.00 0.00 2.90
630 632 7.178451 TGGAAATCGACTATATAATCTGCCTCA 59.822 37.037 0.00 0.00 0.00 3.86
631 633 7.548097 TGGAAATCGACTATATAATCTGCCTC 58.452 38.462 0.00 0.00 0.00 4.70
632 634 7.482169 TGGAAATCGACTATATAATCTGCCT 57.518 36.000 0.00 0.00 0.00 4.75
633 635 9.817809 TTATGGAAATCGACTATATAATCTGCC 57.182 33.333 0.00 0.00 0.00 4.85
643 645 9.314321 CACAAACTAGTTATGGAAATCGACTAT 57.686 33.333 8.92 0.00 0.00 2.12
644 646 7.762615 CCACAAACTAGTTATGGAAATCGACTA 59.237 37.037 24.99 0.00 33.21 2.59
645 647 6.594159 CCACAAACTAGTTATGGAAATCGACT 59.406 38.462 24.99 0.00 33.21 4.18
646 648 6.370718 ACCACAAACTAGTTATGGAAATCGAC 59.629 38.462 31.43 0.00 34.66 4.20
647 649 6.469410 ACCACAAACTAGTTATGGAAATCGA 58.531 36.000 31.43 0.00 34.66 3.59
648 650 6.737254 ACCACAAACTAGTTATGGAAATCG 57.263 37.500 31.43 13.99 34.66 3.34
649 651 9.444600 TTCTACCACAAACTAGTTATGGAAATC 57.555 33.333 31.43 0.00 34.66 2.17
650 652 9.802039 TTTCTACCACAAACTAGTTATGGAAAT 57.198 29.630 31.43 18.86 34.66 2.17
651 653 9.802039 ATTTCTACCACAAACTAGTTATGGAAA 57.198 29.630 31.43 24.00 34.66 3.13
658 660 9.930693 CTTCTCTATTTCTACCACAAACTAGTT 57.069 33.333 1.12 1.12 0.00 2.24
659 661 9.091220 ACTTCTCTATTTCTACCACAAACTAGT 57.909 33.333 0.00 0.00 0.00 2.57
662 664 9.091220 ACTACTTCTCTATTTCTACCACAAACT 57.909 33.333 0.00 0.00 0.00 2.66
663 665 9.708092 AACTACTTCTCTATTTCTACCACAAAC 57.292 33.333 0.00 0.00 0.00 2.93
664 666 9.924650 GAACTACTTCTCTATTTCTACCACAAA 57.075 33.333 0.00 0.00 0.00 2.83
665 667 9.310449 AGAACTACTTCTCTATTTCTACCACAA 57.690 33.333 0.00 0.00 30.11 3.33
666 668 8.880991 AGAACTACTTCTCTATTTCTACCACA 57.119 34.615 0.00 0.00 30.11 4.17
667 669 9.575783 CAAGAACTACTTCTCTATTTCTACCAC 57.424 37.037 0.00 0.00 35.52 4.16
668 670 8.251721 GCAAGAACTACTTCTCTATTTCTACCA 58.748 37.037 0.00 0.00 35.52 3.25
669 671 7.707464 GGCAAGAACTACTTCTCTATTTCTACC 59.293 40.741 0.00 0.00 35.52 3.18
670 672 8.471609 AGGCAAGAACTACTTCTCTATTTCTAC 58.528 37.037 0.00 0.00 35.52 2.59
671 673 8.470805 CAGGCAAGAACTACTTCTCTATTTCTA 58.529 37.037 0.00 0.00 35.52 2.10
672 674 7.327214 CAGGCAAGAACTACTTCTCTATTTCT 58.673 38.462 0.00 0.00 35.52 2.52
673 675 6.536941 CCAGGCAAGAACTACTTCTCTATTTC 59.463 42.308 0.00 0.00 35.52 2.17
674 676 6.013293 ACCAGGCAAGAACTACTTCTCTATTT 60.013 38.462 0.00 0.00 35.52 1.40
675 677 5.485708 ACCAGGCAAGAACTACTTCTCTATT 59.514 40.000 0.00 0.00 35.52 1.73
676 678 5.026790 ACCAGGCAAGAACTACTTCTCTAT 58.973 41.667 0.00 0.00 35.52 1.98
677 679 4.417437 ACCAGGCAAGAACTACTTCTCTA 58.583 43.478 0.00 0.00 35.52 2.43
678 680 3.243724 ACCAGGCAAGAACTACTTCTCT 58.756 45.455 0.00 0.00 35.52 3.10
679 681 3.686916 ACCAGGCAAGAACTACTTCTC 57.313 47.619 0.00 0.00 35.52 2.87
680 682 4.137543 CAAACCAGGCAAGAACTACTTCT 58.862 43.478 0.00 0.00 38.49 2.85
681 683 4.134563 TCAAACCAGGCAAGAACTACTTC 58.865 43.478 0.00 0.00 36.61 3.01
682 684 4.137543 CTCAAACCAGGCAAGAACTACTT 58.862 43.478 0.00 0.00 39.70 2.24
683 685 3.391296 TCTCAAACCAGGCAAGAACTACT 59.609 43.478 0.00 0.00 0.00 2.57
684 686 3.740115 TCTCAAACCAGGCAAGAACTAC 58.260 45.455 0.00 0.00 0.00 2.73
685 687 4.640771 ATCTCAAACCAGGCAAGAACTA 57.359 40.909 0.00 0.00 0.00 2.24
686 688 3.515602 ATCTCAAACCAGGCAAGAACT 57.484 42.857 0.00 0.00 0.00 3.01
687 689 6.116126 ACTATATCTCAAACCAGGCAAGAAC 58.884 40.000 0.00 0.00 0.00 3.01
688 690 6.313519 ACTATATCTCAAACCAGGCAAGAA 57.686 37.500 0.00 0.00 0.00 2.52
689 691 5.957771 ACTATATCTCAAACCAGGCAAGA 57.042 39.130 0.00 0.00 0.00 3.02
690 692 9.376075 CATATACTATATCTCAAACCAGGCAAG 57.624 37.037 0.00 0.00 0.00 4.01
691 693 8.321353 CCATATACTATATCTCAAACCAGGCAA 58.679 37.037 0.00 0.00 0.00 4.52
692 694 7.678171 TCCATATACTATATCTCAAACCAGGCA 59.322 37.037 0.00 0.00 0.00 4.75
693 695 8.079211 TCCATATACTATATCTCAAACCAGGC 57.921 38.462 0.00 0.00 0.00 4.85
696 698 8.992349 CCCATCCATATACTATATCTCAAACCA 58.008 37.037 0.00 0.00 0.00 3.67
697 699 8.993424 ACCCATCCATATACTATATCTCAAACC 58.007 37.037 0.00 0.00 0.00 3.27
770 772 9.865321 CATGACTGATGTTTCCTTTTGATTATT 57.135 29.630 0.00 0.00 0.00 1.40
771 773 9.028284 ACATGACTGATGTTTCCTTTTGATTAT 57.972 29.630 0.00 0.00 43.20 1.28
772 774 8.298854 CACATGACTGATGTTTCCTTTTGATTA 58.701 33.333 0.00 0.00 43.20 1.75
773 775 7.149973 CACATGACTGATGTTTCCTTTTGATT 58.850 34.615 0.00 0.00 43.20 2.57
774 776 6.684686 CACATGACTGATGTTTCCTTTTGAT 58.315 36.000 0.00 0.00 43.20 2.57
775 777 5.507817 GCACATGACTGATGTTTCCTTTTGA 60.508 40.000 0.00 0.00 43.20 2.69
776 778 4.682860 GCACATGACTGATGTTTCCTTTTG 59.317 41.667 0.00 0.00 43.20 2.44
777 779 4.341806 TGCACATGACTGATGTTTCCTTTT 59.658 37.500 0.00 0.00 43.20 2.27
778 780 3.890756 TGCACATGACTGATGTTTCCTTT 59.109 39.130 0.00 0.00 43.20 3.11
779 781 3.489355 TGCACATGACTGATGTTTCCTT 58.511 40.909 0.00 0.00 43.20 3.36
780 782 3.144657 TGCACATGACTGATGTTTCCT 57.855 42.857 0.00 0.00 43.20 3.36
781 783 5.355071 TCTTATGCACATGACTGATGTTTCC 59.645 40.000 0.00 0.00 43.20 3.13
782 784 6.426980 TCTTATGCACATGACTGATGTTTC 57.573 37.500 0.00 0.00 43.20 2.78
783 785 6.822667 TTCTTATGCACATGACTGATGTTT 57.177 33.333 0.00 0.00 43.20 2.83
784 786 8.687292 ATATTCTTATGCACATGACTGATGTT 57.313 30.769 0.00 0.00 43.20 2.71
785 787 9.955102 ATATATTCTTATGCACATGACTGATGT 57.045 29.630 0.00 0.00 46.98 3.06
795 797 9.875691 GTCACATCCTATATATTCTTATGCACA 57.124 33.333 0.00 0.00 0.00 4.57
796 798 9.875691 TGTCACATCCTATATATTCTTATGCAC 57.124 33.333 0.00 0.00 0.00 4.57
803 805 9.271921 TGGCTATTGTCACATCCTATATATTCT 57.728 33.333 0.00 0.00 0.00 2.40
807 809 9.147732 CCTATGGCTATTGTCACATCCTATATA 57.852 37.037 0.00 0.00 0.00 0.86
808 810 7.846311 TCCTATGGCTATTGTCACATCCTATAT 59.154 37.037 0.00 0.00 0.00 0.86
809 811 7.189087 TCCTATGGCTATTGTCACATCCTATA 58.811 38.462 0.00 0.00 0.00 1.31
810 812 6.025539 TCCTATGGCTATTGTCACATCCTAT 58.974 40.000 0.00 0.00 0.00 2.57
811 813 5.402630 TCCTATGGCTATTGTCACATCCTA 58.597 41.667 0.00 0.00 0.00 2.94
812 814 4.234550 TCCTATGGCTATTGTCACATCCT 58.765 43.478 0.00 0.00 0.00 3.24
813 815 4.623932 TCCTATGGCTATTGTCACATCC 57.376 45.455 0.00 0.00 0.00 3.51
814 816 6.128445 CGAATTCCTATGGCTATTGTCACATC 60.128 42.308 0.00 0.00 0.00 3.06
815 817 5.702670 CGAATTCCTATGGCTATTGTCACAT 59.297 40.000 0.00 0.00 0.00 3.21
816 818 5.056480 CGAATTCCTATGGCTATTGTCACA 58.944 41.667 0.00 0.00 0.00 3.58
817 819 5.057149 ACGAATTCCTATGGCTATTGTCAC 58.943 41.667 0.00 0.00 0.00 3.67
818 820 5.290493 ACGAATTCCTATGGCTATTGTCA 57.710 39.130 0.00 0.00 0.00 3.58
819 821 6.619801 AAACGAATTCCTATGGCTATTGTC 57.380 37.500 0.00 0.00 0.00 3.18
820 822 6.710744 CCTAAACGAATTCCTATGGCTATTGT 59.289 38.462 0.00 0.00 0.00 2.71
821 823 6.348540 GCCTAAACGAATTCCTATGGCTATTG 60.349 42.308 13.45 0.00 35.44 1.90
822 824 5.705905 GCCTAAACGAATTCCTATGGCTATT 59.294 40.000 13.45 0.00 35.44 1.73
823 825 5.221843 TGCCTAAACGAATTCCTATGGCTAT 60.222 40.000 18.40 0.00 38.70 2.97
824 826 4.101898 TGCCTAAACGAATTCCTATGGCTA 59.898 41.667 18.40 8.04 38.70 3.93
826 828 3.211045 TGCCTAAACGAATTCCTATGGC 58.789 45.455 13.70 13.70 38.42 4.40
843 845 8.980596 TCATCCTGTTTTTATCATTTAATGCCT 58.019 29.630 0.00 0.00 0.00 4.75
845 847 8.745837 CGTCATCCTGTTTTTATCATTTAATGC 58.254 33.333 0.00 0.00 0.00 3.56
846 848 8.745837 GCGTCATCCTGTTTTTATCATTTAATG 58.254 33.333 0.00 0.00 0.00 1.90
847 849 8.465999 TGCGTCATCCTGTTTTTATCATTTAAT 58.534 29.630 0.00 0.00 0.00 1.40
849 851 7.384439 TGCGTCATCCTGTTTTTATCATTTA 57.616 32.000 0.00 0.00 0.00 1.40
850 852 6.266168 TGCGTCATCCTGTTTTTATCATTT 57.734 33.333 0.00 0.00 0.00 2.32
851 853 5.895636 TGCGTCATCCTGTTTTTATCATT 57.104 34.783 0.00 0.00 0.00 2.57
852 854 7.566760 TTATGCGTCATCCTGTTTTTATCAT 57.433 32.000 0.00 0.00 0.00 2.45
853 855 6.993786 TTATGCGTCATCCTGTTTTTATCA 57.006 33.333 0.00 0.00 0.00 2.15
854 856 9.944663 TTAATTATGCGTCATCCTGTTTTTATC 57.055 29.630 0.00 0.00 0.00 1.75
855 857 9.950680 CTTAATTATGCGTCATCCTGTTTTTAT 57.049 29.630 0.00 0.00 0.00 1.40
856 858 9.168451 TCTTAATTATGCGTCATCCTGTTTTTA 57.832 29.630 0.00 0.00 0.00 1.52
857 859 8.050778 TCTTAATTATGCGTCATCCTGTTTTT 57.949 30.769 0.00 0.00 0.00 1.94
858 860 7.336931 ACTCTTAATTATGCGTCATCCTGTTTT 59.663 33.333 0.00 0.00 0.00 2.43
859 861 6.823689 ACTCTTAATTATGCGTCATCCTGTTT 59.176 34.615 0.00 0.00 0.00 2.83
860 862 6.349300 ACTCTTAATTATGCGTCATCCTGTT 58.651 36.000 0.00 0.00 0.00 3.16
861 863 5.918608 ACTCTTAATTATGCGTCATCCTGT 58.081 37.500 0.00 0.00 0.00 4.00
862 864 9.639601 TTATACTCTTAATTATGCGTCATCCTG 57.360 33.333 0.00 0.00 0.00 3.86
876 878 9.780186 GACCAGGCAAGTAATTATACTCTTAAT 57.220 33.333 0.00 0.00 41.57 1.40
877 879 8.764558 TGACCAGGCAAGTAATTATACTCTTAA 58.235 33.333 0.00 0.00 41.57 1.85
878 880 8.313944 TGACCAGGCAAGTAATTATACTCTTA 57.686 34.615 0.00 0.00 41.57 2.10
879 881 7.195374 TGACCAGGCAAGTAATTATACTCTT 57.805 36.000 0.00 0.00 41.57 2.85
880 882 6.808321 TGACCAGGCAAGTAATTATACTCT 57.192 37.500 0.00 0.00 41.57 3.24
881 883 6.821665 TGTTGACCAGGCAAGTAATTATACTC 59.178 38.462 0.00 0.00 41.57 2.59
882 884 6.717289 TGTTGACCAGGCAAGTAATTATACT 58.283 36.000 0.00 0.00 44.33 2.12
883 885 6.995511 TGTTGACCAGGCAAGTAATTATAC 57.004 37.500 0.00 0.00 0.00 1.47
903 905 2.355209 GCAGGGAGCTAGCTAAGTTGTT 60.355 50.000 19.38 0.00 41.15 2.83
908 910 0.249238 CACGCAGGGAGCTAGCTAAG 60.249 60.000 19.38 8.94 42.61 2.18
916 918 1.464376 TATAGAGGCACGCAGGGAGC 61.464 60.000 0.00 0.00 40.87 4.70
1033 1038 2.358737 GGCGAATATGGGAGCCCG 60.359 66.667 0.29 0.00 43.54 6.13
1074 1079 3.640029 ACACTCCTTCGTAGAAAGAACCA 59.360 43.478 0.00 0.00 45.90 3.67
1076 1081 4.868067 TGACACTCCTTCGTAGAAAGAAC 58.132 43.478 0.00 0.00 45.90 3.01
1120 1125 4.334443 CATCTAAAAGTACATGCACGCAC 58.666 43.478 0.00 0.00 0.00 5.34
1121 1126 3.373748 CCATCTAAAAGTACATGCACGCA 59.626 43.478 0.00 0.00 0.00 5.24
1122 1127 3.621268 TCCATCTAAAAGTACATGCACGC 59.379 43.478 0.00 0.00 0.00 5.34
1123 1128 5.991328 ATCCATCTAAAAGTACATGCACG 57.009 39.130 0.00 0.00 0.00 5.34
1124 1129 7.088589 ACAATCCATCTAAAAGTACATGCAC 57.911 36.000 0.00 0.00 0.00 4.57
1127 1132 9.060347 AGCATACAATCCATCTAAAAGTACATG 57.940 33.333 0.00 0.00 0.00 3.21
1183 1188 5.979517 CGCTCATCACTTCATCTACACATAA 59.020 40.000 0.00 0.00 0.00 1.90
1305 1310 4.214986 TGATTCGGCCTTAATCTCACAA 57.785 40.909 21.58 5.37 34.95 3.33
1314 1319 4.993705 ATAGGGAATTGATTCGGCCTTA 57.006 40.909 0.00 0.00 37.67 2.69
1322 1327 5.733676 GGCAACAACAATAGGGAATTGATT 58.266 37.500 4.82 0.00 46.81 2.57
1346 1351 1.653094 CGCGGCATGTAATTGTGGGT 61.653 55.000 0.00 0.00 0.00 4.51
1415 1420 3.565482 TCTTGACCAAACATGCAGAAGAC 59.435 43.478 0.00 0.00 0.00 3.01
1427 1432 6.215431 TCCTCTTATCATCCTTCTTGACCAAA 59.785 38.462 0.00 0.00 0.00 3.28
1436 1441 6.709846 CCAACAATCTCCTCTTATCATCCTTC 59.290 42.308 0.00 0.00 0.00 3.46
1440 1449 4.759183 GGCCAACAATCTCCTCTTATCATC 59.241 45.833 0.00 0.00 0.00 2.92
1458 1467 7.998383 AGATTACTTCAATATATGTGTGGCCAA 59.002 33.333 7.24 0.00 0.00 4.52
1460 1469 7.445402 ACAGATTACTTCAATATATGTGTGGCC 59.555 37.037 0.00 0.00 0.00 5.36
1461 1470 8.383318 ACAGATTACTTCAATATATGTGTGGC 57.617 34.615 0.00 0.00 0.00 5.01
1481 1524 7.765695 AAATACACATGGTCAAAGAACAGAT 57.234 32.000 0.00 0.00 30.70 2.90
1488 1531 8.417780 TTTGTGAAAAATACACATGGTCAAAG 57.582 30.769 0.00 0.00 45.52 2.77
1491 1534 8.200120 TCAATTTGTGAAAAATACACATGGTCA 58.800 29.630 0.00 0.00 45.52 4.02
1561 1609 7.039993 ACCAGGTCCATTAAGTAATTCAAACAC 60.040 37.037 0.00 0.00 0.00 3.32
1574 1625 5.783360 TCAAGTCTCTTACCAGGTCCATTAA 59.217 40.000 0.00 0.00 0.00 1.40
1580 1631 6.468543 AGAAAATCAAGTCTCTTACCAGGTC 58.531 40.000 0.00 0.00 0.00 3.85
1600 1651 9.474920 CATGCAAAGTAACCTTTTCATAAGAAA 57.525 29.630 0.00 0.00 40.88 2.52
1603 1654 7.601856 TCCATGCAAAGTAACCTTTTCATAAG 58.398 34.615 0.00 0.00 40.88 1.73
1608 1659 6.983890 TCTTTTCCATGCAAAGTAACCTTTTC 59.016 34.615 12.78 0.00 38.87 2.29
1617 1668 4.985538 TCTACCTCTTTTCCATGCAAAGT 58.014 39.130 12.78 0.00 33.61 2.66
1624 1675 9.682465 GGTACTTTTTATCTACCTCTTTTCCAT 57.318 33.333 0.00 0.00 0.00 3.41
1664 1720 7.839680 ATCTTTGGGTTGACAAACTTTATCT 57.160 32.000 2.68 0.00 35.57 1.98
1673 1729 4.764172 CCAAACAATCTTTGGGTTGACAA 58.236 39.130 4.20 0.00 43.88 3.18
1674 1730 4.399004 CCAAACAATCTTTGGGTTGACA 57.601 40.909 4.20 0.00 43.88 3.58
1682 1738 2.965147 ACTCCCCACCAAACAATCTTTG 59.035 45.455 0.00 0.00 0.00 2.77
1683 1739 2.965147 CACTCCCCACCAAACAATCTTT 59.035 45.455 0.00 0.00 0.00 2.52
1684 1740 2.176798 TCACTCCCCACCAAACAATCTT 59.823 45.455 0.00 0.00 0.00 2.40
1685 1741 1.780309 TCACTCCCCACCAAACAATCT 59.220 47.619 0.00 0.00 0.00 2.40
1686 1742 2.286365 TCACTCCCCACCAAACAATC 57.714 50.000 0.00 0.00 0.00 2.67
1687 1743 2.999185 ATCACTCCCCACCAAACAAT 57.001 45.000 0.00 0.00 0.00 2.71
1688 1744 2.443632 TGTATCACTCCCCACCAAACAA 59.556 45.455 0.00 0.00 0.00 2.83
1689 1745 2.058705 TGTATCACTCCCCACCAAACA 58.941 47.619 0.00 0.00 0.00 2.83
1690 1746 2.871096 TGTATCACTCCCCACCAAAC 57.129 50.000 0.00 0.00 0.00 2.93
1691 1747 3.621214 CGATTGTATCACTCCCCACCAAA 60.621 47.826 0.00 0.00 0.00 3.28
1692 1748 2.093181 CGATTGTATCACTCCCCACCAA 60.093 50.000 0.00 0.00 0.00 3.67
1693 1749 1.484653 CGATTGTATCACTCCCCACCA 59.515 52.381 0.00 0.00 0.00 4.17
1694 1750 1.760613 TCGATTGTATCACTCCCCACC 59.239 52.381 0.00 0.00 0.00 4.61
1695 1751 3.322254 AGATCGATTGTATCACTCCCCAC 59.678 47.826 0.00 0.00 0.00 4.61
1696 1752 3.574396 GAGATCGATTGTATCACTCCCCA 59.426 47.826 0.00 0.00 0.00 4.96
1697 1753 3.574396 TGAGATCGATTGTATCACTCCCC 59.426 47.826 0.00 0.00 0.00 4.81
1698 1754 4.855715 TGAGATCGATTGTATCACTCCC 57.144 45.455 0.00 0.00 0.00 4.30
1699 1755 6.219473 ACATTGAGATCGATTGTATCACTCC 58.781 40.000 0.00 0.00 0.00 3.85
1700 1756 7.706281 AACATTGAGATCGATTGTATCACTC 57.294 36.000 0.00 0.00 0.00 3.51
1701 1757 9.254133 CTTAACATTGAGATCGATTGTATCACT 57.746 33.333 0.00 0.00 0.00 3.41
1702 1758 9.035607 ACTTAACATTGAGATCGATTGTATCAC 57.964 33.333 0.00 0.00 0.00 3.06
1707 1763 9.599866 TTGATACTTAACATTGAGATCGATTGT 57.400 29.630 0.00 0.00 0.00 2.71
1710 1766 9.689976 CTCTTGATACTTAACATTGAGATCGAT 57.310 33.333 0.00 0.00 0.00 3.59
1711 1767 8.138074 CCTCTTGATACTTAACATTGAGATCGA 58.862 37.037 0.00 0.00 0.00 3.59
1712 1768 7.383572 CCCTCTTGATACTTAACATTGAGATCG 59.616 40.741 0.00 0.00 0.00 3.69
1713 1769 8.207545 ACCCTCTTGATACTTAACATTGAGATC 58.792 37.037 0.00 0.00 0.00 2.75
1714 1770 8.095452 ACCCTCTTGATACTTAACATTGAGAT 57.905 34.615 0.00 0.00 0.00 2.75
1715 1771 7.496346 ACCCTCTTGATACTTAACATTGAGA 57.504 36.000 0.00 0.00 0.00 3.27
1716 1772 7.066284 CCAACCCTCTTGATACTTAACATTGAG 59.934 40.741 0.00 0.00 0.00 3.02
1717 1773 6.884295 CCAACCCTCTTGATACTTAACATTGA 59.116 38.462 0.00 0.00 0.00 2.57
1718 1774 6.095440 CCCAACCCTCTTGATACTTAACATTG 59.905 42.308 0.00 0.00 0.00 2.82
1719 1775 6.011981 TCCCAACCCTCTTGATACTTAACATT 60.012 38.462 0.00 0.00 0.00 2.71
1720 1776 5.491078 TCCCAACCCTCTTGATACTTAACAT 59.509 40.000 0.00 0.00 0.00 2.71
1721 1777 4.847512 TCCCAACCCTCTTGATACTTAACA 59.152 41.667 0.00 0.00 0.00 2.41
1722 1778 5.431179 TCCCAACCCTCTTGATACTTAAC 57.569 43.478 0.00 0.00 0.00 2.01
1723 1779 6.652205 AATCCCAACCCTCTTGATACTTAA 57.348 37.500 0.00 0.00 0.00 1.85
1724 1780 7.758820 TTAATCCCAACCCTCTTGATACTTA 57.241 36.000 0.00 0.00 0.00 2.24
1725 1781 6.652205 TTAATCCCAACCCTCTTGATACTT 57.348 37.500 0.00 0.00 0.00 2.24
1726 1782 6.652205 TTTAATCCCAACCCTCTTGATACT 57.348 37.500 0.00 0.00 0.00 2.12
1727 1783 8.218488 AGTATTTAATCCCAACCCTCTTGATAC 58.782 37.037 0.00 0.00 0.00 2.24
1728 1784 8.344939 AGTATTTAATCCCAACCCTCTTGATA 57.655 34.615 0.00 0.00 0.00 2.15
1729 1785 7.129504 AGAGTATTTAATCCCAACCCTCTTGAT 59.870 37.037 0.00 0.00 0.00 2.57
1732 1970 6.353951 CCAGAGTATTTAATCCCAACCCTCTT 60.354 42.308 0.00 0.00 0.00 2.85
1735 1973 5.043762 TCCAGAGTATTTAATCCCAACCCT 58.956 41.667 0.00 0.00 0.00 4.34
1767 2081 7.776969 AGCCATTGTAGATCATCACAAAAGTAT 59.223 33.333 10.41 0.00 38.11 2.12
1799 2113 9.326489 ACTATAAATCTAGCCATCCTACATTGA 57.674 33.333 0.00 0.00 0.00 2.57
1800 2114 9.376075 CACTATAAATCTAGCCATCCTACATTG 57.624 37.037 0.00 0.00 0.00 2.82
1811 2130 5.925509 TGACAACCCACTATAAATCTAGCC 58.074 41.667 0.00 0.00 0.00 3.93
1818 2137 7.841282 TGGAATTTTGACAACCCACTATAAA 57.159 32.000 0.00 0.00 0.00 1.40
1824 2143 4.119136 CTGTTGGAATTTTGACAACCCAC 58.881 43.478 0.00 0.00 42.75 4.61
1825 2144 3.133721 CCTGTTGGAATTTTGACAACCCA 59.866 43.478 0.00 0.00 42.75 4.51
1829 2148 5.181748 CCAAACCTGTTGGAATTTTGACAA 58.818 37.500 0.00 0.00 42.06 3.18
1836 2155 5.069914 GTCCTTTACCAAACCTGTTGGAATT 59.930 40.000 11.96 0.00 42.06 2.17
1839 2158 3.053544 TGTCCTTTACCAAACCTGTTGGA 60.054 43.478 11.96 0.00 42.06 3.53
1840 2159 3.292460 TGTCCTTTACCAAACCTGTTGG 58.708 45.455 3.55 3.55 44.91 3.77
1849 2168 4.585581 GGTTTTAAGCCTGTCCTTTACCAA 59.414 41.667 0.00 0.00 0.00 3.67
1851 2170 4.146564 TGGTTTTAAGCCTGTCCTTTACC 58.853 43.478 0.00 0.00 0.00 2.85
1852 2171 4.321008 GCTGGTTTTAAGCCTGTCCTTTAC 60.321 45.833 6.59 0.00 34.45 2.01
1861 2180 0.872388 CGTTCGCTGGTTTTAAGCCT 59.128 50.000 0.00 0.00 37.37 4.58
1885 2204 0.903942 GCATTTGCCATTCTCCCCAA 59.096 50.000 0.00 0.00 34.31 4.12
1893 2212 2.147436 AAACGTTCGCATTTGCCATT 57.853 40.000 0.00 0.00 37.91 3.16
1908 2227 8.285776 AGAAACAGAAATTGCTATGAAAAACG 57.714 30.769 0.00 0.00 0.00 3.60
1918 2237 5.047519 CCATCCTCAAGAAACAGAAATTGCT 60.048 40.000 0.00 0.00 0.00 3.91
1926 2245 9.014297 ACTAAATTTACCATCCTCAAGAAACAG 57.986 33.333 0.00 0.00 0.00 3.16
1931 2250 8.325787 TGCTAACTAAATTTACCATCCTCAAGA 58.674 33.333 0.00 0.00 0.00 3.02
1932 2251 8.506168 TGCTAACTAAATTTACCATCCTCAAG 57.494 34.615 0.00 0.00 0.00 3.02
1933 2252 8.871629 TTGCTAACTAAATTTACCATCCTCAA 57.128 30.769 0.00 0.00 0.00 3.02
1934 2253 7.067008 GCTTGCTAACTAAATTTACCATCCTCA 59.933 37.037 0.00 0.00 0.00 3.86
1946 2265 7.341769 TGGATTTACCATGCTTGCTAACTAAAT 59.658 33.333 0.00 0.00 44.64 1.40
1964 2283 3.764885 ATTGAACTGCGCTGGATTTAC 57.235 42.857 18.98 3.96 0.00 2.01
1965 2284 4.782019 AAATTGAACTGCGCTGGATTTA 57.218 36.364 18.98 0.00 0.00 1.40
1967 2286 3.256631 AGAAAATTGAACTGCGCTGGATT 59.743 39.130 18.98 4.52 0.00 3.01
1968 2287 2.821969 AGAAAATTGAACTGCGCTGGAT 59.178 40.909 18.98 6.89 0.00 3.41
1969 2288 2.030893 CAGAAAATTGAACTGCGCTGGA 60.031 45.455 18.98 2.10 0.00 3.86
1971 2290 2.975851 GACAGAAAATTGAACTGCGCTG 59.024 45.455 13.23 13.23 35.38 5.18
1972 2291 2.618241 TGACAGAAAATTGAACTGCGCT 59.382 40.909 9.73 0.00 35.38 5.92
1973 2292 2.975851 CTGACAGAAAATTGAACTGCGC 59.024 45.455 0.00 0.00 35.38 6.09
1974 2293 3.250762 TCCTGACAGAAAATTGAACTGCG 59.749 43.478 3.32 0.00 35.38 5.18
1975 2294 4.836125 TCCTGACAGAAAATTGAACTGC 57.164 40.909 3.32 0.00 35.38 4.40
1976 2295 6.145048 GCAAATCCTGACAGAAAATTGAACTG 59.855 38.462 3.32 0.00 37.62 3.16
1977 2296 6.041296 AGCAAATCCTGACAGAAAATTGAACT 59.959 34.615 3.32 0.00 0.00 3.01
1978 2297 6.145048 CAGCAAATCCTGACAGAAAATTGAAC 59.855 38.462 3.32 0.00 34.77 3.18
1979 2298 6.183360 ACAGCAAATCCTGACAGAAAATTGAA 60.183 34.615 3.32 0.00 36.67 2.69
1980 2299 5.302568 ACAGCAAATCCTGACAGAAAATTGA 59.697 36.000 3.32 0.00 36.67 2.57
1981 2300 5.404366 CACAGCAAATCCTGACAGAAAATTG 59.596 40.000 3.32 5.14 36.67 2.32
1982 2301 5.535333 CACAGCAAATCCTGACAGAAAATT 58.465 37.500 3.32 0.00 36.67 1.82
1983 2302 4.560108 GCACAGCAAATCCTGACAGAAAAT 60.560 41.667 3.32 0.00 36.67 1.82
1984 2303 3.243501 GCACAGCAAATCCTGACAGAAAA 60.244 43.478 3.32 0.00 36.67 2.29
1988 2307 1.531423 AGCACAGCAAATCCTGACAG 58.469 50.000 0.00 0.00 36.67 3.51
1991 2310 0.599558 GCAAGCACAGCAAATCCTGA 59.400 50.000 0.00 0.00 36.67 3.86
2002 2321 5.911752 TGGAAATTTCTTTTAGCAAGCACA 58.088 33.333 17.42 0.09 0.00 4.57
2003 2322 6.091305 GGATGGAAATTTCTTTTAGCAAGCAC 59.909 38.462 17.42 0.00 0.00 4.40
2020 2339 6.392625 TTTAAATTGTCACACGGATGGAAA 57.607 33.333 0.00 0.00 0.00 3.13
2023 2342 6.630676 CAATTTAAATTGTCACACGGATGG 57.369 37.500 26.14 3.00 40.61 3.51
2042 2361 9.474920 ACAAATTGAATGTTTATCACGACAATT 57.525 25.926 0.00 0.00 37.64 2.32
2043 2362 9.128107 GACAAATTGAATGTTTATCACGACAAT 57.872 29.630 0.00 0.00 32.47 2.71
2044 2363 8.131731 TGACAAATTGAATGTTTATCACGACAA 58.868 29.630 0.00 0.00 0.00 3.18
2045 2364 7.643579 TGACAAATTGAATGTTTATCACGACA 58.356 30.769 0.00 0.00 0.00 4.35
2046 2365 8.673626 ATGACAAATTGAATGTTTATCACGAC 57.326 30.769 0.00 0.00 26.18 4.34
2047 2366 9.340695 GAATGACAAATTGAATGTTTATCACGA 57.659 29.630 0.00 0.00 26.18 4.35
2048 2367 9.345517 AGAATGACAAATTGAATGTTTATCACG 57.654 29.630 0.00 0.00 26.18 4.35
2052 2371 9.643693 GGACAGAATGACAAATTGAATGTTTAT 57.356 29.630 0.00 0.00 39.69 1.40
2053 2372 8.637099 TGGACAGAATGACAAATTGAATGTTTA 58.363 29.630 0.00 0.00 39.69 2.01
2054 2373 7.499292 TGGACAGAATGACAAATTGAATGTTT 58.501 30.769 0.00 0.00 39.69 2.83
2055 2374 7.053316 TGGACAGAATGACAAATTGAATGTT 57.947 32.000 0.00 0.00 39.69 2.71
2056 2375 6.653526 TGGACAGAATGACAAATTGAATGT 57.346 33.333 0.00 0.00 39.69 2.71
2057 2376 6.090358 GCTTGGACAGAATGACAAATTGAATG 59.910 38.462 0.00 0.00 39.69 2.67
2058 2377 6.161381 GCTTGGACAGAATGACAAATTGAAT 58.839 36.000 0.00 0.00 39.69 2.57
2059 2378 5.068855 TGCTTGGACAGAATGACAAATTGAA 59.931 36.000 0.00 0.00 39.69 2.69
2060 2379 4.583907 TGCTTGGACAGAATGACAAATTGA 59.416 37.500 0.00 0.00 39.69 2.57
2061 2380 4.873817 TGCTTGGACAGAATGACAAATTG 58.126 39.130 0.00 0.00 39.69 2.32
2062 2381 5.534207 TTGCTTGGACAGAATGACAAATT 57.466 34.783 0.00 0.00 39.69 1.82
2078 2397 1.369209 CCGTGCTGACGTTTGCTTG 60.369 57.895 13.40 6.92 44.54 4.01
2079 2398 0.531090 TACCGTGCTGACGTTTGCTT 60.531 50.000 13.40 1.10 44.54 3.91
2083 2402 1.873698 ATGTTACCGTGCTGACGTTT 58.126 45.000 0.00 0.00 44.54 3.60
2090 2409 2.450609 AACGAGAATGTTACCGTGCT 57.549 45.000 0.00 0.00 35.28 4.40
2093 2412 3.116079 ACCAAACGAGAATGTTACCGT 57.884 42.857 0.00 0.00 36.77 4.83
2095 2414 6.549061 GGATTTACCAAACGAGAATGTTACC 58.451 40.000 0.00 0.00 38.79 2.85
2096 2415 6.128472 ACGGATTTACCAAACGAGAATGTTAC 60.128 38.462 0.00 0.00 38.90 2.50
2129 2448 3.627395 AAGTTGGCCTGATTCGTCATA 57.373 42.857 3.32 0.00 0.00 2.15
2141 2460 1.298602 CAAAACCAGCAAAGTTGGCC 58.701 50.000 0.00 0.00 39.39 5.36
2143 2462 3.999663 TCAAACAAAACCAGCAAAGTTGG 59.000 39.130 0.00 0.00 41.60 3.77
2144 2463 5.604010 TTCAAACAAAACCAGCAAAGTTG 57.396 34.783 0.00 0.00 0.00 3.16
2145 2464 6.429385 TCATTTCAAACAAAACCAGCAAAGTT 59.571 30.769 0.00 0.00 0.00 2.66
2181 2500 0.603569 TCCCGAGTTGAGAAGCTCAC 59.396 55.000 0.00 0.00 40.46 3.51
2182 2501 1.338107 TTCCCGAGTTGAGAAGCTCA 58.662 50.000 0.00 0.00 38.87 4.26
2207 2526 8.798402 CCAACTTATATTTTGTGGGTCAGTTTA 58.202 33.333 0.00 0.00 0.00 2.01
2270 2590 2.358615 ACAGCCGAAATGAGCGCA 60.359 55.556 11.47 0.00 0.00 6.09
2272 2592 0.729116 ATTCACAGCCGAAATGAGCG 59.271 50.000 0.00 0.00 0.00 5.03
2281 2601 3.499737 GCCGTCCATTCACAGCCG 61.500 66.667 0.00 0.00 0.00 5.52
2287 2607 0.107214 GAATCCAGGCCGTCCATTCA 60.107 55.000 12.33 0.00 33.74 2.57
2290 2610 1.224592 GTGAATCCAGGCCGTCCAT 59.775 57.895 0.00 0.00 33.74 3.41
2293 2613 4.522971 GAGTGAATCCAGGCCGTC 57.477 61.111 0.00 0.00 0.00 4.79
2306 2626 2.093181 TGGGAAACATACGGATGGAGTG 60.093 50.000 13.36 0.00 37.39 3.51
2344 2665 3.815962 TGCCGTACTTGCAAACAGATTTA 59.184 39.130 0.00 0.00 35.40 1.40
2352 2673 2.942879 CGCTGCCGTACTTGCAAA 59.057 55.556 0.00 0.00 38.46 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.