Multiple sequence alignment - TraesCS6A01G001100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G001100 chr6A 100.000 6875 0 0 1 6875 645366 638492 0.000000e+00 12696.0
1 TraesCS6A01G001100 chr6A 95.074 1279 50 8 2499 3765 611507 612784 0.000000e+00 2001.0
2 TraesCS6A01G001100 chr6A 91.198 1227 59 22 875 2087 610036 611227 0.000000e+00 1622.0
3 TraesCS6A01G001100 chr6A 89.736 1023 72 20 3787 4803 612948 613943 0.000000e+00 1277.0
4 TraesCS6A01G001100 chr6A 87.463 678 71 7 1198 1868 71677089 71677759 0.000000e+00 769.0
5 TraesCS6A01G001100 chr6A 96.441 281 5 2 2176 2451 611225 611505 6.280000e-125 459.0
6 TraesCS6A01G001100 chr6A 77.177 758 117 36 1 739 673378 672658 2.320000e-104 390.0
7 TraesCS6A01G001100 chr6A 89.375 320 18 11 5691 6010 614995 615298 8.360000e-104 388.0
8 TraesCS6A01G001100 chr6A 89.011 182 17 1 1 182 671370 671192 8.970000e-54 222.0
9 TraesCS6A01G001100 chr6A 91.209 91 2 2 5262 5351 614508 614593 1.210000e-22 119.0
10 TraesCS6A01G001100 chr3B 88.334 2323 169 49 2646 4911 772900370 772898093 0.000000e+00 2695.0
11 TraesCS6A01G001100 chr3B 86.987 2021 138 58 4918 6875 772898000 772896042 0.000000e+00 2159.0
12 TraesCS6A01G001100 chr3B 85.534 1030 99 35 874 1882 772901618 772900618 0.000000e+00 1031.0
13 TraesCS6A01G001100 chr3B 87.031 293 25 8 561 850 669424125 669424407 1.110000e-82 318.0
14 TraesCS6A01G001100 chr3B 82.206 281 37 9 5691 5970 772893293 772893025 5.360000e-56 230.0
15 TraesCS6A01G001100 chr3B 92.647 68 1 1 806 869 772901718 772901651 2.040000e-15 95.3
16 TraesCS6A01G001100 chr6D 89.270 1836 102 33 2000 3796 2278258 2276479 0.000000e+00 2211.0
17 TraesCS6A01G001100 chr6D 89.577 1420 101 29 491 1882 2239566 2240966 0.000000e+00 1759.0
18 TraesCS6A01G001100 chr6D 90.428 1191 66 18 4039 5198 2242754 2243927 0.000000e+00 1524.0
19 TraesCS6A01G001100 chr6D 87.958 1337 102 31 2544 3854 2241391 2242694 0.000000e+00 1522.0
20 TraesCS6A01G001100 chr6D 90.344 1191 67 18 4039 5198 2276339 2275166 0.000000e+00 1519.0
21 TraesCS6A01G001100 chr6D 86.688 1247 112 36 848 2076 2279747 2278537 0.000000e+00 1334.0
22 TraesCS6A01G001100 chr6D 90.083 726 38 18 6153 6875 2274356 2273662 0.000000e+00 911.0
23 TraesCS6A01G001100 chr6D 83.797 827 105 16 1 825 2197796 2198595 0.000000e+00 758.0
24 TraesCS6A01G001100 chr6D 93.355 301 19 1 5601 5900 2244235 2244535 1.760000e-120 444.0
25 TraesCS6A01G001100 chr6D 84.134 479 40 19 5601 6068 2274858 2274405 1.370000e-116 431.0
26 TraesCS6A01G001100 chr6D 89.105 257 13 6 999 1252 2217758 2218002 8.660000e-79 305.0
27 TraesCS6A01G001100 chr6D 96.703 182 5 1 5233 5413 2243929 2244110 1.120000e-77 302.0
28 TraesCS6A01G001100 chr6D 96.703 182 5 1 5233 5413 2275164 2274983 1.120000e-77 302.0
29 TraesCS6A01G001100 chr6D 80.134 448 49 21 2683 3097 2171175 2171615 1.450000e-76 298.0
30 TraesCS6A01G001100 chr6D 74.174 666 87 42 1837 2461 2240963 2241584 1.510000e-46 198.0
31 TraesCS6A01G001100 chr6D 94.495 109 5 1 895 1002 2208804 2208912 4.270000e-37 167.0
32 TraesCS6A01G001100 chr6D 97.059 68 1 1 3787 3854 2276465 2276399 5.640000e-21 113.0
33 TraesCS6A01G001100 chr6B 88.945 1384 110 29 2542 3909 4141397 4140041 0.000000e+00 1668.0
34 TraesCS6A01G001100 chr6B 89.527 1289 88 29 5617 6875 3880769 3882040 0.000000e+00 1589.0
35 TraesCS6A01G001100 chr6B 87.869 1286 97 30 604 1864 3878724 3879975 0.000000e+00 1456.0
36 TraesCS6A01G001100 chr6B 92.299 896 54 9 4024 4911 4140049 4139161 0.000000e+00 1258.0
37 TraesCS6A01G001100 chr6B 91.074 717 43 12 881 1577 4142469 4141754 0.000000e+00 950.0
38 TraesCS6A01G001100 chr6B 85.360 888 66 26 5053 5900 4139037 4138174 0.000000e+00 861.0
39 TraesCS6A01G001100 chr6B 84.585 772 91 15 1 758 4143270 4142513 0.000000e+00 741.0
40 TraesCS6A01G001100 chr6B 82.459 610 83 11 1 605 3877384 3877974 4.760000e-141 512.0
41 TraesCS6A01G001100 chr6B 81.922 437 41 21 2694 3097 4153970 4153539 1.100000e-87 335.0
42 TraesCS6A01G001100 chr6B 80.135 443 69 12 2692 3119 3873887 3874325 5.180000e-81 313.0
43 TraesCS6A01G001100 chr6B 80.623 289 28 17 5137 5413 420517351 420517079 1.510000e-46 198.0
44 TraesCS6A01G001100 chr6B 80.277 289 29 17 5137 5413 139852892 139853164 7.040000e-45 193.0
45 TraesCS6A01G001100 chr3A 88.035 677 65 8 1198 1868 509152506 509153172 0.000000e+00 787.0
46 TraesCS6A01G001100 chr3A 91.169 419 29 5 1466 1882 458296340 458296752 4.660000e-156 562.0
47 TraesCS6A01G001100 chr5A 86.982 676 72 8 1199 1868 183877730 183878395 0.000000e+00 747.0
48 TraesCS6A01G001100 chr5A 90.152 132 12 1 5645 5775 486768557 486768426 3.300000e-38 171.0
49 TraesCS6A01G001100 chr7A 90.618 437 37 2 1435 1868 29800698 29801133 1.660000e-160 577.0
50 TraesCS6A01G001100 chr2B 91.388 418 27 6 1467 1882 64725106 64725516 1.290000e-156 564.0
51 TraesCS6A01G001100 chr1A 91.169 419 29 5 1466 1882 317441891 317441479 4.660000e-156 562.0
52 TraesCS6A01G001100 chr2D 74.062 613 118 25 2692 3285 633495372 633494782 5.400000e-51 213.0
53 TraesCS6A01G001100 chr2D 78.986 138 27 2 6739 6875 13896660 13896796 7.340000e-15 93.5
54 TraesCS6A01G001100 chr2D 83.696 92 9 4 5261 5351 633491641 633491555 1.590000e-11 82.4
55 TraesCS6A01G001100 chr5B 81.679 262 24 15 5137 5390 678552704 678552459 5.440000e-46 196.0
56 TraesCS6A01G001100 chr5B 85.417 96 14 0 3654 3749 509846424 509846519 4.390000e-17 100.0
57 TraesCS6A01G001100 chr5B 83.838 99 15 1 3654 3752 39824 39921 7.340000e-15 93.5
58 TraesCS6A01G001100 chr4B 80.508 236 40 4 2692 2923 27220340 27220107 7.090000e-40 176.0
59 TraesCS6A01G001100 chr1D 71.978 546 106 34 245 771 22129994 22130511 4.360000e-22 117.0
60 TraesCS6A01G001100 chr2A 79.710 138 26 2 6739 6875 16419952 16419816 1.580000e-16 99.0
61 TraesCS6A01G001100 chr5D 84.946 93 13 1 3660 3752 1595114 1595023 7.340000e-15 93.5
62 TraesCS6A01G001100 chr4D 100.000 28 0 0 744 771 444237542 444237515 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G001100 chr6A 638492 645366 6874 True 12696.000000 12696 100.000000 1 6875 1 chr6A.!!$R1 6874
1 TraesCS6A01G001100 chr6A 610036 615298 5262 False 977.666667 2001 92.172167 875 6010 6 chr6A.!!$F2 5135
2 TraesCS6A01G001100 chr6A 71677089 71677759 670 False 769.000000 769 87.463000 1198 1868 1 chr6A.!!$F1 670
3 TraesCS6A01G001100 chr6A 671192 673378 2186 True 306.000000 390 83.094000 1 739 2 chr6A.!!$R2 738
4 TraesCS6A01G001100 chr3B 772893025 772901718 8693 True 1242.060000 2695 87.141600 806 6875 5 chr3B.!!$R1 6069
5 TraesCS6A01G001100 chr6D 2273662 2279747 6085 True 974.428571 2211 90.611571 848 6875 7 chr6D.!!$R1 6027
6 TraesCS6A01G001100 chr6D 2239566 2244535 4969 False 958.166667 1759 88.699167 491 5900 6 chr6D.!!$F5 5409
7 TraesCS6A01G001100 chr6D 2197796 2198595 799 False 758.000000 758 83.797000 1 825 1 chr6D.!!$F2 824
8 TraesCS6A01G001100 chr6B 4138174 4143270 5096 True 1095.600000 1668 88.452600 1 5900 5 chr6B.!!$R3 5899
9 TraesCS6A01G001100 chr6B 3873887 3882040 8153 False 967.500000 1589 84.997500 1 6875 4 chr6B.!!$F2 6874
10 TraesCS6A01G001100 chr3A 509152506 509153172 666 False 787.000000 787 88.035000 1198 1868 1 chr3A.!!$F2 670
11 TraesCS6A01G001100 chr5A 183877730 183878395 665 False 747.000000 747 86.982000 1199 1868 1 chr5A.!!$F1 669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
869 5154 0.040646 ACTCACCCGGTCCTCATGTA 59.959 55.0 0.00 0.0 0.00 2.29 F
1271 5867 0.031716 TCAGATGAGTCCTCCCAGGG 60.032 60.0 0.00 0.0 35.59 4.45 F
2347 7236 0.036577 GCTCCCAGATGCGCTCATAT 60.037 55.0 9.73 0.0 31.96 1.78 F
2495 7399 0.033208 ATGTGGCCATGTTACCCCAG 60.033 55.0 9.72 0.0 0.00 4.45 F
3337 8936 0.037326 TCCTCTGTCGTGTTCCATGC 60.037 55.0 0.00 0.0 0.00 4.06 F
5011 11057 0.532862 ACTGTCGCCAGGTTGTTGAG 60.533 55.0 0.00 0.0 43.36 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2328 7217 0.036577 ATATGAGCGCATCTGGGAGC 60.037 55.000 11.47 0.0 35.94 4.70 R
2466 7365 0.041535 ATGGCCACATGGATGGTTGT 59.958 50.000 8.16 0.0 42.28 3.32 R
3202 8800 1.333619 GACTCCTTCGCAACAGCAAAA 59.666 47.619 0.00 0.0 0.00 2.44 R
4391 10244 1.089481 CGGCGTTATGGACAGCACAT 61.089 55.000 0.00 0.0 32.08 3.21 R
5030 11076 0.461961 ACTCAGCGAGATAACCAGGC 59.538 55.000 11.64 0.0 33.32 4.85 R
5929 12199 0.114560 TCCTTCTCCACCTCGGACTT 59.885 55.000 0.00 0.0 39.64 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 3568 6.279513 ACTGAGACTTCTAGAATGAAGGTG 57.720 41.667 5.44 0.00 45.49 4.00
117 3616 9.762933 TTCTAGCAAATTTGTTTTGAAAGCTAT 57.237 25.926 19.03 0.00 46.36 2.97
144 3643 2.309898 AACAAGTTGACGTTATGCGC 57.690 45.000 10.54 0.00 46.11 6.09
197 3702 4.037684 CCCTATAGTAGTCAAGGGTGAACG 59.962 50.000 8.45 0.00 43.26 3.95
244 3751 8.749026 TTCCGCCCAACTTTATATATAAAACA 57.251 30.769 16.69 0.00 32.39 2.83
247 3760 7.588488 CCGCCCAACTTTATATATAAAACAACG 59.412 37.037 16.69 14.51 32.39 4.10
349 3874 7.924412 CACAAAGTAACCTAGACTACTGACAAA 59.076 37.037 0.00 0.00 0.00 2.83
356 3881 4.217983 CCTAGACTACTGACAAAAGACGGT 59.782 45.833 0.00 0.00 0.00 4.83
361 3886 5.287226 ACTACTGACAAAAGACGGTACAAG 58.713 41.667 0.00 0.00 0.00 3.16
380 3905 0.613012 GTGCCTCCAAGGGAAAGCAT 60.613 55.000 11.44 0.00 41.15 3.79
384 3909 0.253044 CTCCAAGGGAAAGCATCGGA 59.747 55.000 0.00 0.00 0.00 4.55
422 3948 1.654220 CAACCAAGTTGTCGCCTGG 59.346 57.895 1.45 0.00 38.56 4.45
423 3949 0.817634 CAACCAAGTTGTCGCCTGGA 60.818 55.000 0.00 0.00 38.56 3.86
424 3950 0.535102 AACCAAGTTGTCGCCTGGAG 60.535 55.000 0.00 0.00 0.00 3.86
425 3951 1.371183 CCAAGTTGTCGCCTGGAGA 59.629 57.895 0.00 0.00 0.00 3.71
449 3975 4.860881 CCCTGCCCTCCCGCTCTA 62.861 72.222 0.00 0.00 0.00 2.43
467 3993 1.967066 CTAGATCATGGAGCCCGAACT 59.033 52.381 0.00 0.00 0.00 3.01
475 4001 3.876589 GAGCCCGAACTTGTCCGCA 62.877 63.158 0.00 0.00 0.00 5.69
476 4002 2.975799 GCCCGAACTTGTCCGCAA 60.976 61.111 0.00 0.00 0.00 4.85
478 4004 1.574428 CCCGAACTTGTCCGCAAAG 59.426 57.895 0.00 0.00 33.73 2.77
481 4007 1.535462 CCGAACTTGTCCGCAAAGATT 59.465 47.619 0.00 0.00 33.73 2.40
485 4011 3.126001 ACTTGTCCGCAAAGATTGAGA 57.874 42.857 0.00 0.00 33.73 3.27
487 4013 4.074970 ACTTGTCCGCAAAGATTGAGAAT 58.925 39.130 0.00 0.00 33.73 2.40
489 4015 5.010012 ACTTGTCCGCAAAGATTGAGAATTT 59.990 36.000 0.00 0.00 33.73 1.82
492 4018 3.193267 TCCGCAAAGATTGAGAATTTGGG 59.807 43.478 6.89 6.89 42.92 4.12
501 4027 0.890683 GAGAATTTGGGGTGTGCCAG 59.109 55.000 0.00 0.00 36.17 4.85
525 4051 1.406887 GGACCCGCTTGCAAGATAAGA 60.407 52.381 30.39 0.00 0.00 2.10
544 4070 8.815912 AGATAAGAAGGTAAATGCAACCATTTT 58.184 29.630 8.72 1.23 46.66 1.82
545 4071 8.776376 ATAAGAAGGTAAATGCAACCATTTTG 57.224 30.769 8.72 0.00 46.66 2.44
553 4079 2.237393 GCAACCATTTTGCAACAGGA 57.763 45.000 15.68 0.00 44.34 3.86
554 4080 2.559440 GCAACCATTTTGCAACAGGAA 58.441 42.857 15.68 1.16 44.34 3.36
577 4103 0.480252 AGAAGCTTCAAGGCAGGGTT 59.520 50.000 27.57 0.28 34.17 4.11
583 4109 2.546584 GCTTCAAGGCAGGGTTTGAAAG 60.547 50.000 1.32 0.00 41.30 2.62
655 4933 1.219393 GCTCCTGGGAGAGAAACGG 59.781 63.158 19.64 0.00 44.53 4.44
664 4942 0.384353 GAGAGAAACGGCAACAACGC 60.384 55.000 0.00 0.00 34.00 4.84
665 4943 1.092921 AGAGAAACGGCAACAACGCA 61.093 50.000 0.00 0.00 34.00 5.24
741 5020 1.811645 GCCTAGAGAGATGGACCGCC 61.812 65.000 0.00 0.00 0.00 6.13
856 5141 0.467290 TTGTTTGGGGCTCACTCACC 60.467 55.000 0.00 0.00 0.00 4.02
869 5154 0.040646 ACTCACCCGGTCCTCATGTA 59.959 55.000 0.00 0.00 0.00 2.29
870 5155 1.191535 CTCACCCGGTCCTCATGTAA 58.808 55.000 0.00 0.00 0.00 2.41
872 5157 0.902531 CACCCGGTCCTCATGTAAGT 59.097 55.000 0.00 0.00 0.00 2.24
945 5475 3.225940 GGATCCATTTCCATTCCCACTC 58.774 50.000 6.95 0.00 35.72 3.51
1257 5850 2.747822 CGACGACGACGGGTCAGAT 61.748 63.158 12.58 0.00 46.42 2.90
1269 5865 1.118838 GGTCAGATGAGTCCTCCCAG 58.881 60.000 0.00 0.00 0.00 4.45
1270 5866 1.118838 GTCAGATGAGTCCTCCCAGG 58.881 60.000 0.00 0.00 36.46 4.45
1271 5867 0.031716 TCAGATGAGTCCTCCCAGGG 60.032 60.000 0.00 0.00 35.59 4.45
1580 6325 1.251527 GGCGAGAGGACCAAGTGAGA 61.252 60.000 0.00 0.00 0.00 3.27
1587 6332 5.308825 GAGAGGACCAAGTGAGAAATTTCA 58.691 41.667 19.99 0.00 0.00 2.69
1643 6419 5.061311 CCGCTGCTGTTAAGAATGAATTTTG 59.939 40.000 0.00 0.00 0.00 2.44
1850 6636 4.821260 ACCAAACCCAAATTGCTTCAATTC 59.179 37.500 5.39 0.00 42.32 2.17
1864 6650 5.069648 TGCTTCAATTCCAAACCATGTTACA 59.930 36.000 0.00 0.00 0.00 2.41
1899 6727 4.002982 AGAATACAGTGCTTGAATCGCAA 58.997 39.130 0.00 0.00 39.39 4.85
1938 6798 3.181476 GCCATGTTACCCCAAATTAGCTG 60.181 47.826 0.00 0.00 0.00 4.24
1946 6806 2.493278 CCCCAAATTAGCTGACCACAAG 59.507 50.000 0.00 0.00 0.00 3.16
1948 6808 3.057315 CCCAAATTAGCTGACCACAAGTG 60.057 47.826 0.00 0.00 0.00 3.16
1969 6829 2.796593 GCAATGCACCTGTTTTTCTCAC 59.203 45.455 0.00 0.00 0.00 3.51
1974 6834 2.034685 GCACCTGTTTTTCTCACTTCCC 59.965 50.000 0.00 0.00 0.00 3.97
1993 6853 7.611855 CACTTCCCCTGAATATTCTGTTAACTT 59.388 37.037 16.24 0.00 0.00 2.66
1994 6854 8.832735 ACTTCCCCTGAATATTCTGTTAACTTA 58.167 33.333 16.24 0.00 0.00 2.24
1998 6858 9.110502 CCCCTGAATATTCTGTTAACTTAACTC 57.889 37.037 16.24 1.91 39.38 3.01
2041 6905 0.874390 TGTTCTGTTTCCATGCGCTC 59.126 50.000 9.73 0.00 0.00 5.03
2105 6994 0.760572 AATGCAAAGCCAAGCAACCT 59.239 45.000 0.00 0.00 44.88 3.50
2109 6998 2.368221 TGCAAAGCCAAGCAACCTAAAT 59.632 40.909 0.00 0.00 37.90 1.40
2110 6999 2.995939 GCAAAGCCAAGCAACCTAAATC 59.004 45.455 0.00 0.00 0.00 2.17
2117 7006 3.057596 CCAAGCAACCTAAATCGCTTCAA 60.058 43.478 0.00 0.00 42.60 2.69
2145 7034 2.025416 CCCATGTTACCCAGATTGACCA 60.025 50.000 0.00 0.00 0.00 4.02
2146 7035 3.563261 CCCATGTTACCCAGATTGACCAA 60.563 47.826 0.00 0.00 0.00 3.67
2159 7048 6.038356 CAGATTGACCAAAGAATACAATGCC 58.962 40.000 0.00 0.00 32.50 4.40
2165 7054 6.211184 TGACCAAAGAATACAATGCCTGAATT 59.789 34.615 0.00 0.00 0.00 2.17
2166 7055 6.633856 ACCAAAGAATACAATGCCTGAATTC 58.366 36.000 0.00 0.00 0.00 2.17
2172 7061 2.607499 ACAATGCCTGAATTCCAACCA 58.393 42.857 2.27 0.00 0.00 3.67
2174 7063 3.390639 ACAATGCCTGAATTCCAACCAAA 59.609 39.130 2.27 0.00 0.00 3.28
2175 7064 3.967332 ATGCCTGAATTCCAACCAAAG 57.033 42.857 2.27 0.00 0.00 2.77
2177 7066 1.344114 GCCTGAATTCCAACCAAAGCA 59.656 47.619 2.27 0.00 0.00 3.91
2179 7068 2.629617 CCTGAATTCCAACCAAAGCACT 59.370 45.455 2.27 0.00 0.00 4.40
2187 7076 0.675633 AACCAAAGCACTCATGTGGC 59.324 50.000 0.00 0.45 43.97 5.01
2188 7077 1.181098 ACCAAAGCACTCATGTGGCC 61.181 55.000 0.00 0.00 43.97 5.36
2189 7078 1.180456 CCAAAGCACTCATGTGGCCA 61.180 55.000 0.00 0.00 43.97 5.36
2190 7079 0.892755 CAAAGCACTCATGTGGCCAT 59.107 50.000 9.72 0.00 43.97 4.40
2192 7081 0.251474 AAGCACTCATGTGGCCATGT 60.251 50.000 9.72 0.00 46.99 3.21
2193 7082 0.251474 AGCACTCATGTGGCCATGTT 60.251 50.000 9.72 0.00 46.99 2.71
2194 7083 0.604578 GCACTCATGTGGCCATGTTT 59.395 50.000 9.72 0.00 46.99 2.83
2195 7084 1.670674 GCACTCATGTGGCCATGTTTG 60.671 52.381 9.72 7.12 46.99 2.93
2196 7085 1.614903 CACTCATGTGGCCATGTTTGT 59.385 47.619 9.72 2.97 46.99 2.83
2197 7086 2.036217 CACTCATGTGGCCATGTTTGTT 59.964 45.455 9.72 0.00 46.99 2.83
2198 7087 3.255395 CACTCATGTGGCCATGTTTGTTA 59.745 43.478 9.72 0.00 46.99 2.41
2199 7088 3.255642 ACTCATGTGGCCATGTTTGTTAC 59.744 43.478 9.72 0.00 46.99 2.50
2200 7089 2.560542 TCATGTGGCCATGTTTGTTACC 59.439 45.455 9.72 0.00 46.99 2.85
2201 7090 1.333177 TGTGGCCATGTTTGTTACCC 58.667 50.000 9.72 0.00 0.00 3.69
2202 7091 0.606096 GTGGCCATGTTTGTTACCCC 59.394 55.000 9.72 0.00 0.00 4.95
2203 7092 0.188587 TGGCCATGTTTGTTACCCCA 59.811 50.000 0.00 0.00 0.00 4.96
2204 7093 1.343069 GGCCATGTTTGTTACCCCAA 58.657 50.000 0.00 0.00 0.00 4.12
2205 7094 1.694696 GGCCATGTTTGTTACCCCAAA 59.305 47.619 0.00 0.00 32.12 3.28
2206 7095 2.304470 GGCCATGTTTGTTACCCCAAAT 59.696 45.455 0.00 0.00 36.75 2.32
2207 7096 3.244735 GGCCATGTTTGTTACCCCAAATT 60.245 43.478 0.00 0.00 36.75 1.82
2208 7097 4.393834 GCCATGTTTGTTACCCCAAATTT 58.606 39.130 0.00 0.00 36.75 1.82
2209 7098 5.513267 GGCCATGTTTGTTACCCCAAATTTA 60.513 40.000 0.00 0.00 36.75 1.40
2210 7099 5.641636 GCCATGTTTGTTACCCCAAATTTAG 59.358 40.000 0.00 0.00 36.75 1.85
2211 7100 6.742926 GCCATGTTTGTTACCCCAAATTTAGT 60.743 38.462 0.00 0.00 36.75 2.24
2212 7101 7.220740 CCATGTTTGTTACCCCAAATTTAGTT 58.779 34.615 0.00 0.00 36.75 2.24
2213 7102 7.172361 CCATGTTTGTTACCCCAAATTTAGTTG 59.828 37.037 0.00 0.00 36.75 3.16
2214 7103 7.419711 TGTTTGTTACCCCAAATTTAGTTGA 57.580 32.000 0.00 0.00 36.75 3.18
2215 7104 7.266400 TGTTTGTTACCCCAAATTTAGTTGAC 58.734 34.615 0.00 0.00 36.75 3.18
2216 7105 6.408107 TTGTTACCCCAAATTTAGTTGACC 57.592 37.500 0.00 0.00 0.00 4.02
2217 7106 5.455872 TGTTACCCCAAATTTAGTTGACCA 58.544 37.500 0.00 0.00 0.00 4.02
2218 7107 5.302313 TGTTACCCCAAATTTAGTTGACCAC 59.698 40.000 0.00 0.00 0.00 4.16
2219 7108 3.917300 ACCCCAAATTTAGTTGACCACA 58.083 40.909 0.00 0.00 0.00 4.17
2220 7109 4.290942 ACCCCAAATTTAGTTGACCACAA 58.709 39.130 0.00 0.00 0.00 3.33
2221 7110 4.717280 ACCCCAAATTTAGTTGACCACAAA 59.283 37.500 0.00 0.00 37.77 2.83
2222 7111 5.368230 ACCCCAAATTTAGTTGACCACAAAT 59.632 36.000 0.00 0.00 37.77 2.32
2223 7112 6.555360 ACCCCAAATTTAGTTGACCACAAATA 59.445 34.615 0.00 0.00 37.77 1.40
2224 7113 6.871492 CCCCAAATTTAGTTGACCACAAATAC 59.129 38.462 0.00 0.00 36.52 1.89
2225 7114 7.437748 CCCAAATTTAGTTGACCACAAATACA 58.562 34.615 0.00 0.00 36.52 2.29
2226 7115 7.928706 CCCAAATTTAGTTGACCACAAATACAA 59.071 33.333 0.00 0.00 36.52 2.41
2227 7116 9.487790 CCAAATTTAGTTGACCACAAATACAAT 57.512 29.630 0.00 0.00 36.52 2.71
2229 7118 8.532977 AATTTAGTTGACCACAAATACAATGC 57.467 30.769 0.00 0.00 36.52 3.56
2230 7119 6.641169 TTAGTTGACCACAAATACAATGCA 57.359 33.333 0.00 0.00 36.52 3.96
2231 7120 4.870363 AGTTGACCACAAATACAATGCAC 58.130 39.130 0.00 0.00 37.77 4.57
2232 7121 3.932545 TGACCACAAATACAATGCACC 57.067 42.857 0.00 0.00 0.00 5.01
2233 7122 3.495331 TGACCACAAATACAATGCACCT 58.505 40.909 0.00 0.00 0.00 4.00
2234 7123 3.255395 TGACCACAAATACAATGCACCTG 59.745 43.478 0.00 0.00 0.00 4.00
2235 7124 3.230134 ACCACAAATACAATGCACCTGT 58.770 40.909 8.25 8.25 0.00 4.00
2236 7125 4.402829 ACCACAAATACAATGCACCTGTA 58.597 39.130 11.74 11.74 33.93 2.74
2237 7126 5.016173 ACCACAAATACAATGCACCTGTAT 58.984 37.500 14.66 14.66 40.84 2.29
2238 7127 5.480073 ACCACAAATACAATGCACCTGTATT 59.520 36.000 21.90 21.90 46.84 1.89
2244 7133 7.701539 AATACAATGCACCTGTATTTCTGAA 57.298 32.000 21.90 0.82 43.99 3.02
2245 7134 7.886629 ATACAATGCACCTGTATTTCTGAAT 57.113 32.000 14.66 0.00 36.76 2.57
2246 7135 5.957798 ACAATGCACCTGTATTTCTGAATG 58.042 37.500 1.43 0.00 0.00 2.67
2247 7136 4.644103 ATGCACCTGTATTTCTGAATGC 57.356 40.909 0.00 3.60 0.00 3.56
2248 7137 2.754552 TGCACCTGTATTTCTGAATGCC 59.245 45.455 7.25 0.00 0.00 4.40
2249 7138 2.099756 GCACCTGTATTTCTGAATGCCC 59.900 50.000 0.00 0.00 0.00 5.36
2250 7139 3.624777 CACCTGTATTTCTGAATGCCCT 58.375 45.455 0.00 0.00 0.00 5.19
2251 7140 4.019174 CACCTGTATTTCTGAATGCCCTT 58.981 43.478 0.00 0.00 0.00 3.95
2252 7141 4.019174 ACCTGTATTTCTGAATGCCCTTG 58.981 43.478 0.00 0.00 0.00 3.61
2253 7142 4.019174 CCTGTATTTCTGAATGCCCTTGT 58.981 43.478 0.00 0.00 0.00 3.16
2254 7143 4.463891 CCTGTATTTCTGAATGCCCTTGTT 59.536 41.667 0.00 0.00 0.00 2.83
2255 7144 5.393461 CCTGTATTTCTGAATGCCCTTGTTC 60.393 44.000 0.00 0.00 0.00 3.18
2256 7145 5.324409 TGTATTTCTGAATGCCCTTGTTCT 58.676 37.500 0.00 0.00 0.00 3.01
2257 7146 5.774690 TGTATTTCTGAATGCCCTTGTTCTT 59.225 36.000 0.00 0.00 0.00 2.52
2258 7147 5.813513 ATTTCTGAATGCCCTTGTTCTTT 57.186 34.783 0.00 0.00 0.00 2.52
2259 7148 5.612725 TTTCTGAATGCCCTTGTTCTTTT 57.387 34.783 0.00 0.00 0.00 2.27
2260 7149 4.589216 TCTGAATGCCCTTGTTCTTTTG 57.411 40.909 0.00 0.00 0.00 2.44
2261 7150 3.062042 CTGAATGCCCTTGTTCTTTTGC 58.938 45.455 0.00 0.00 0.00 3.68
2262 7151 2.699846 TGAATGCCCTTGTTCTTTTGCT 59.300 40.909 0.00 0.00 0.00 3.91
2263 7152 3.134442 TGAATGCCCTTGTTCTTTTGCTT 59.866 39.130 0.00 0.00 0.00 3.91
2264 7153 2.600470 TGCCCTTGTTCTTTTGCTTG 57.400 45.000 0.00 0.00 0.00 4.01
2265 7154 1.220529 GCCCTTGTTCTTTTGCTTGC 58.779 50.000 0.00 0.00 0.00 4.01
2266 7155 1.202568 GCCCTTGTTCTTTTGCTTGCT 60.203 47.619 0.00 0.00 0.00 3.91
2267 7156 2.747436 CCCTTGTTCTTTTGCTTGCTC 58.253 47.619 0.00 0.00 0.00 4.26
2268 7157 2.101249 CCCTTGTTCTTTTGCTTGCTCA 59.899 45.455 0.00 0.00 0.00 4.26
2269 7158 3.118542 CCTTGTTCTTTTGCTTGCTCAC 58.881 45.455 0.00 0.00 0.00 3.51
2270 7159 3.181483 CCTTGTTCTTTTGCTTGCTCACT 60.181 43.478 0.00 0.00 0.00 3.41
2271 7160 4.036734 CCTTGTTCTTTTGCTTGCTCACTA 59.963 41.667 0.00 0.00 0.00 2.74
2272 7161 4.552166 TGTTCTTTTGCTTGCTCACTAC 57.448 40.909 0.00 0.00 0.00 2.73
2273 7162 4.199310 TGTTCTTTTGCTTGCTCACTACT 58.801 39.130 0.00 0.00 0.00 2.57
2274 7163 5.364778 TGTTCTTTTGCTTGCTCACTACTA 58.635 37.500 0.00 0.00 0.00 1.82
2275 7164 5.236478 TGTTCTTTTGCTTGCTCACTACTAC 59.764 40.000 0.00 0.00 0.00 2.73
2276 7165 4.956085 TCTTTTGCTTGCTCACTACTACA 58.044 39.130 0.00 0.00 0.00 2.74
2277 7166 4.991056 TCTTTTGCTTGCTCACTACTACAG 59.009 41.667 0.00 0.00 0.00 2.74
2278 7167 4.336889 TTTGCTTGCTCACTACTACAGT 57.663 40.909 0.00 0.00 38.32 3.55
2279 7168 5.462530 TTTGCTTGCTCACTACTACAGTA 57.537 39.130 0.00 0.00 34.98 2.74
2300 7189 7.549488 ACAGTAGTAGATAAAATGTCAACCTGC 59.451 37.037 0.00 0.00 0.00 4.85
2301 7190 7.549134 CAGTAGTAGATAAAATGTCAACCTGCA 59.451 37.037 0.00 0.00 0.00 4.41
2302 7191 8.267894 AGTAGTAGATAAAATGTCAACCTGCAT 58.732 33.333 0.00 0.00 0.00 3.96
2303 7192 7.325660 AGTAGATAAAATGTCAACCTGCATG 57.674 36.000 0.00 0.00 0.00 4.06
2304 7193 6.886459 AGTAGATAAAATGTCAACCTGCATGT 59.114 34.615 0.00 0.00 0.00 3.21
2305 7194 6.594788 AGATAAAATGTCAACCTGCATGTT 57.405 33.333 1.04 1.04 0.00 2.71
2306 7195 6.624423 AGATAAAATGTCAACCTGCATGTTC 58.376 36.000 4.20 0.00 0.00 3.18
2307 7196 3.665745 AAATGTCAACCTGCATGTTCC 57.334 42.857 4.20 0.00 0.00 3.62
2308 7197 2.291209 ATGTCAACCTGCATGTTCCA 57.709 45.000 4.20 5.46 0.00 3.53
2309 7198 2.291209 TGTCAACCTGCATGTTCCAT 57.709 45.000 4.20 0.00 0.00 3.41
2310 7199 2.596346 TGTCAACCTGCATGTTCCATT 58.404 42.857 4.20 0.00 0.00 3.16
2311 7200 3.760738 TGTCAACCTGCATGTTCCATTA 58.239 40.909 4.20 0.00 0.00 1.90
2312 7201 3.505680 TGTCAACCTGCATGTTCCATTAC 59.494 43.478 4.20 0.44 0.00 1.89
2313 7202 3.088532 TCAACCTGCATGTTCCATTACC 58.911 45.455 4.20 0.00 0.00 2.85
2314 7203 2.824936 CAACCTGCATGTTCCATTACCA 59.175 45.455 4.20 0.00 0.00 3.25
2315 7204 3.386932 ACCTGCATGTTCCATTACCAT 57.613 42.857 0.00 0.00 0.00 3.55
2316 7205 3.025978 ACCTGCATGTTCCATTACCATG 58.974 45.455 0.00 0.00 39.13 3.66
2317 7206 3.025978 CCTGCATGTTCCATTACCATGT 58.974 45.455 0.00 0.00 38.53 3.21
2318 7207 3.181484 CCTGCATGTTCCATTACCATGTG 60.181 47.826 0.00 0.00 38.53 3.21
2319 7208 2.166050 TGCATGTTCCATTACCATGTGC 59.834 45.455 0.00 0.00 38.53 4.57
2320 7209 2.428171 GCATGTTCCATTACCATGTGCT 59.572 45.455 0.00 0.00 38.53 4.40
2321 7210 3.735820 GCATGTTCCATTACCATGTGCTG 60.736 47.826 0.00 0.00 38.53 4.41
2322 7211 3.431673 TGTTCCATTACCATGTGCTGA 57.568 42.857 0.00 0.00 0.00 4.26
2323 7212 3.346315 TGTTCCATTACCATGTGCTGAG 58.654 45.455 0.00 0.00 0.00 3.35
2324 7213 3.008923 TGTTCCATTACCATGTGCTGAGA 59.991 43.478 0.00 0.00 0.00 3.27
2325 7214 3.998913 TCCATTACCATGTGCTGAGAA 57.001 42.857 0.00 0.00 0.00 2.87
2326 7215 3.609853 TCCATTACCATGTGCTGAGAAC 58.390 45.455 0.00 0.00 0.00 3.01
2327 7216 2.352651 CCATTACCATGTGCTGAGAACG 59.647 50.000 0.00 0.00 0.00 3.95
2328 7217 2.093306 TTACCATGTGCTGAGAACGG 57.907 50.000 0.00 0.00 0.00 4.44
2335 7224 2.125350 GCTGAGAACGGCTCCCAG 60.125 66.667 5.29 0.32 43.26 4.45
2336 7225 2.650116 GCTGAGAACGGCTCCCAGA 61.650 63.158 3.00 0.00 43.26 3.86
2337 7226 1.965754 GCTGAGAACGGCTCCCAGAT 61.966 60.000 3.00 0.00 43.26 2.90
2338 7227 0.179089 CTGAGAACGGCTCCCAGATG 60.179 60.000 5.29 0.00 43.26 2.90
2339 7228 1.522580 GAGAACGGCTCCCAGATGC 60.523 63.158 0.00 0.00 37.69 3.91
2340 7229 2.892425 GAACGGCTCCCAGATGCG 60.892 66.667 0.00 0.00 0.00 4.73
2344 7233 4.166888 GGCTCCCAGATGCGCTCA 62.167 66.667 9.73 0.00 0.00 4.26
2345 7234 2.110627 GCTCCCAGATGCGCTCAT 59.889 61.111 9.73 0.00 35.17 2.90
2346 7235 1.368950 GCTCCCAGATGCGCTCATA 59.631 57.895 9.73 0.00 31.96 2.15
2347 7236 0.036577 GCTCCCAGATGCGCTCATAT 60.037 55.000 9.73 0.00 31.96 1.78
2348 7237 1.723220 CTCCCAGATGCGCTCATATG 58.277 55.000 9.73 4.32 40.59 1.78
2349 7238 1.001746 CTCCCAGATGCGCTCATATGT 59.998 52.381 9.73 0.00 39.59 2.29
2350 7239 1.417517 TCCCAGATGCGCTCATATGTT 59.582 47.619 9.73 0.00 39.59 2.71
2351 7240 2.158769 TCCCAGATGCGCTCATATGTTT 60.159 45.455 9.73 0.00 39.59 2.83
2352 7241 3.070878 TCCCAGATGCGCTCATATGTTTA 59.929 43.478 9.73 0.00 39.59 2.01
2353 7242 3.434641 CCCAGATGCGCTCATATGTTTAG 59.565 47.826 9.73 0.00 39.59 1.85
2354 7243 3.120408 CCAGATGCGCTCATATGTTTAGC 60.120 47.826 9.73 3.75 39.59 3.09
2355 7244 3.744942 CAGATGCGCTCATATGTTTAGCT 59.255 43.478 9.73 0.00 37.20 3.32
2356 7245 4.925646 CAGATGCGCTCATATGTTTAGCTA 59.074 41.667 9.73 0.00 37.20 3.32
2357 7246 5.579904 CAGATGCGCTCATATGTTTAGCTAT 59.420 40.000 9.73 7.08 37.20 2.97
2358 7247 5.809562 AGATGCGCTCATATGTTTAGCTATC 59.190 40.000 9.73 13.35 34.03 2.08
2359 7248 3.920412 TGCGCTCATATGTTTAGCTATCG 59.080 43.478 9.73 0.14 34.03 2.92
2360 7249 3.304559 GCGCTCATATGTTTAGCTATCGG 59.695 47.826 0.00 0.00 34.03 4.18
2361 7250 4.733850 CGCTCATATGTTTAGCTATCGGA 58.266 43.478 11.76 0.00 34.03 4.55
2362 7251 4.559251 CGCTCATATGTTTAGCTATCGGAC 59.441 45.833 11.76 0.00 34.03 4.79
2363 7252 5.470368 GCTCATATGTTTAGCTATCGGACA 58.530 41.667 1.90 0.00 33.40 4.02
2367 7256 6.923508 TCATATGTTTAGCTATCGGACACTTG 59.076 38.462 1.90 0.82 0.00 3.16
2378 7267 6.147821 GCTATCGGACACTTGCATATAACATT 59.852 38.462 0.00 0.00 0.00 2.71
2381 7270 5.064579 TCGGACACTTGCATATAACATTGTG 59.935 40.000 0.00 0.00 0.00 3.33
2384 7273 7.042119 CGGACACTTGCATATAACATTGTGATA 60.042 37.037 14.14 0.00 0.00 2.15
2453 7352 2.479650 GCTTGCTGCTGCTTCGAG 59.520 61.111 17.00 10.03 40.48 4.04
2466 7365 1.068333 GCTTCGAGGCTTGAATTGCAA 60.068 47.619 17.32 0.00 34.73 4.08
2472 7373 1.761784 AGGCTTGAATTGCAACAACCA 59.238 42.857 0.00 0.00 31.96 3.67
2495 7399 0.033208 ATGTGGCCATGTTACCCCAG 60.033 55.000 9.72 0.00 0.00 4.45
2499 7403 1.341877 TGGCCATGTTACCCCAGATTG 60.342 52.381 0.00 0.00 0.00 2.67
2500 7404 1.064017 GGCCATGTTACCCCAGATTGA 60.064 52.381 0.00 0.00 0.00 2.57
2501 7405 2.424812 GGCCATGTTACCCCAGATTGAT 60.425 50.000 0.00 0.00 0.00 2.57
2502 7406 2.887152 GCCATGTTACCCCAGATTGATC 59.113 50.000 0.00 0.00 0.00 2.92
2503 7407 3.490348 CCATGTTACCCCAGATTGATCC 58.510 50.000 0.00 0.00 0.00 3.36
2504 7408 3.117550 CCATGTTACCCCAGATTGATCCA 60.118 47.826 0.00 0.00 0.00 3.41
2505 7409 4.535781 CATGTTACCCCAGATTGATCCAA 58.464 43.478 0.00 0.00 0.00 3.53
2507 7411 5.004361 TGTTACCCCAGATTGATCCAAAA 57.996 39.130 0.00 0.00 0.00 2.44
2508 7412 5.588845 TGTTACCCCAGATTGATCCAAAAT 58.411 37.500 0.00 0.00 0.00 1.82
2509 7413 6.022315 TGTTACCCCAGATTGATCCAAAATT 58.978 36.000 0.00 0.00 0.00 1.82
2512 7416 5.588845 ACCCCAGATTGATCCAAAATTACA 58.411 37.500 0.00 0.00 0.00 2.41
2517 7424 7.436080 CCCAGATTGATCCAAAATTACATTTCG 59.564 37.037 0.00 0.00 0.00 3.46
2518 7425 7.975616 CCAGATTGATCCAAAATTACATTTCGT 59.024 33.333 0.00 0.00 0.00 3.85
2520 7427 8.960591 AGATTGATCCAAAATTACATTTCGTCT 58.039 29.630 0.00 0.00 0.00 4.18
2521 7428 8.915871 ATTGATCCAAAATTACATTTCGTCTG 57.084 30.769 0.00 0.00 0.00 3.51
2523 7430 7.881142 TGATCCAAAATTACATTTCGTCTGTT 58.119 30.769 0.00 0.00 0.00 3.16
2526 7433 6.263392 TCCAAAATTACATTTCGTCTGTTCCA 59.737 34.615 0.00 0.00 0.00 3.53
2533 7440 4.396166 ACATTTCGTCTGTTCCATGATTCC 59.604 41.667 0.00 0.00 0.00 3.01
2540 7447 4.012374 TCTGTTCCATGATTCCTTTGCTC 58.988 43.478 0.00 0.00 0.00 4.26
2541 7448 3.760151 CTGTTCCATGATTCCTTTGCTCA 59.240 43.478 0.00 0.00 0.00 4.26
2569 7577 7.112122 ACTAGATAAAATGTCAACCTGCATGA 58.888 34.615 0.00 0.00 0.00 3.07
2801 8398 2.629617 CCAAGCTTTTCCACATTGACCT 59.370 45.455 0.00 0.00 0.00 3.85
3202 8800 9.912634 TTCTAATTTCGAAATCAGATTTTGCTT 57.087 25.926 21.63 7.25 34.35 3.91
3244 8842 4.403432 TCCTCAAAATTTCTGCCCATCATC 59.597 41.667 0.00 0.00 0.00 2.92
3305 8904 1.204704 CTGCTGATCGGACCAGTGTTA 59.795 52.381 5.48 0.00 34.29 2.41
3337 8936 0.037326 TCCTCTGTCGTGTTCCATGC 60.037 55.000 0.00 0.00 0.00 4.06
3517 9122 7.161773 CAATTACTTTGGAATCACTGGACAT 57.838 36.000 0.00 0.00 0.00 3.06
3526 9131 1.715785 TCACTGGACATGAGACCACA 58.284 50.000 0.00 0.00 34.63 4.17
3632 9255 6.545504 TTAATGTGTCTGCTCTTTCTGTTC 57.454 37.500 0.00 0.00 0.00 3.18
3652 9275 6.614160 TGTTCTGTACATGCTGATTTGATTG 58.386 36.000 0.00 0.00 0.00 2.67
3687 9310 4.574674 TGCTTACACTGGGAATGAAGAT 57.425 40.909 0.00 0.00 0.00 2.40
3899 9699 7.010738 TGTTTATTTCTGCTTATACCGTGCTAC 59.989 37.037 0.00 0.00 0.00 3.58
3926 9726 2.294233 GCTTCAGAAACTTGCATGTCCA 59.706 45.455 5.61 0.00 0.00 4.02
3927 9727 3.057033 GCTTCAGAAACTTGCATGTCCAT 60.057 43.478 5.61 0.00 0.00 3.41
3928 9728 4.482386 CTTCAGAAACTTGCATGTCCATG 58.518 43.478 5.61 2.86 41.60 3.66
3929 9729 3.489355 TCAGAAACTTGCATGTCCATGT 58.511 40.909 5.61 0.00 40.80 3.21
3930 9730 3.503363 TCAGAAACTTGCATGTCCATGTC 59.497 43.478 5.61 2.73 40.80 3.06
3931 9731 2.821969 AGAAACTTGCATGTCCATGTCC 59.178 45.455 5.61 0.00 40.80 4.02
3959 9759 6.029346 ACATTTTCTCATCTTTCGCCAAAT 57.971 33.333 0.00 0.00 0.00 2.32
3976 9776 4.695455 GCCAAATTAGCACTTGTCTGTAGA 59.305 41.667 0.00 0.00 0.00 2.59
3987 9787 6.314896 GCACTTGTCTGTAGAAGATGCTTTAT 59.685 38.462 0.00 0.00 37.23 1.40
3988 9788 7.148340 GCACTTGTCTGTAGAAGATGCTTTATT 60.148 37.037 0.00 0.00 37.23 1.40
3989 9789 9.371136 CACTTGTCTGTAGAAGATGCTTTATTA 57.629 33.333 0.00 0.00 37.23 0.98
4079 9924 8.740123 TTGTTCAAGAAAGTACAATGTTCCTA 57.260 30.769 0.00 0.00 0.00 2.94
4205 10051 5.746245 CGTGAGTGGAGAAGAATTATCTGAC 59.254 44.000 0.00 0.00 36.37 3.51
4227 10073 8.939201 TGACATCTCTTTTCTCTGTCATTATC 57.061 34.615 0.00 0.00 40.77 1.75
4233 10079 9.025041 TCTCTTTTCTCTGTCATTATCTACACA 57.975 33.333 0.00 0.00 0.00 3.72
4254 10100 5.798934 CACAGCAATAAGACATTCTTTCTGC 59.201 40.000 11.31 11.31 40.34 4.26
4376 10229 4.935808 CAGTTCTTGCGAGGTAGGTATTTT 59.064 41.667 0.00 0.00 0.00 1.82
4378 10231 6.761714 CAGTTCTTGCGAGGTAGGTATTTTAT 59.238 38.462 0.00 0.00 0.00 1.40
4538 10391 3.365535 GCCAAAATGGACGGCACT 58.634 55.556 0.00 0.00 45.52 4.40
4574 10427 1.227527 TGCCAAGGTCTGTGTCACG 60.228 57.895 0.00 0.00 0.00 4.35
4576 10429 1.222115 GCCAAGGTCTGTGTCACGAC 61.222 60.000 15.31 15.31 0.00 4.34
4643 10510 1.139947 GACTAGTCTGAGTGCCGGC 59.860 63.158 22.73 22.73 0.00 6.13
4662 10529 3.209410 GGCCCATCAACAGTCATAGAAG 58.791 50.000 0.00 0.00 0.00 2.85
4709 10576 6.311723 ACAATGCTAGTTATAAAACGTGCAC 58.688 36.000 6.82 6.82 44.75 4.57
4775 10643 5.940192 TGTTTATGGTGCACAGAAAGTAG 57.060 39.130 20.43 0.00 40.61 2.57
4908 10859 2.855880 TAACCCATGCCCGTGCGTAC 62.856 60.000 0.00 0.00 41.78 3.67
4911 10862 2.513666 CATGCCCGTGCGTACCAT 60.514 61.111 0.00 0.00 41.78 3.55
4950 10993 7.474445 TGGTTAGGATGATAGAGATAGAGCTT 58.526 38.462 0.00 0.00 0.00 3.74
5011 11057 0.532862 ACTGTCGCCAGGTTGTTGAG 60.533 55.000 0.00 0.00 43.36 3.02
5027 11073 3.973305 TGTTGAGGGATAGTGCCATATCA 59.027 43.478 7.38 0.00 34.42 2.15
5030 11076 1.902508 AGGGATAGTGCCATATCACCG 59.097 52.381 4.37 0.00 36.40 4.94
5098 11222 5.801176 ATTACGATTATGACTGTTACGCG 57.199 39.130 3.53 3.53 0.00 6.01
5099 11223 2.456989 ACGATTATGACTGTTACGCGG 58.543 47.619 12.47 0.00 0.00 6.46
5230 11354 5.814764 TCTCTTCCGTTCACTACTATGTC 57.185 43.478 0.00 0.00 0.00 3.06
5231 11355 5.498393 TCTCTTCCGTTCACTACTATGTCT 58.502 41.667 0.00 0.00 0.00 3.41
5233 11357 7.281098 TCTCTTCCGTTCACTACTATGTCTAT 58.719 38.462 0.00 0.00 0.00 1.98
5234 11358 7.226918 TCTCTTCCGTTCACTACTATGTCTATG 59.773 40.741 0.00 0.00 0.00 2.23
5235 11359 5.434352 TCCGTTCACTACTATGTCTATGC 57.566 43.478 0.00 0.00 0.00 3.14
5236 11360 4.885325 TCCGTTCACTACTATGTCTATGCA 59.115 41.667 0.00 0.00 0.00 3.96
5237 11361 5.008712 TCCGTTCACTACTATGTCTATGCAG 59.991 44.000 0.00 0.00 0.00 4.41
5238 11362 5.008712 CCGTTCACTACTATGTCTATGCAGA 59.991 44.000 0.00 0.00 0.00 4.26
5427 11590 5.188555 TGTCTTTCAGCTATCTCCTTGACAT 59.811 40.000 0.00 0.00 0.00 3.06
5465 11629 7.859377 TGATATCATCTACGTTTCGTTAGAACC 59.141 37.037 0.00 0.00 41.54 3.62
5477 11641 2.228343 CGTTAGAACCGTCTCCAGACTT 59.772 50.000 5.21 0.00 42.66 3.01
5481 11645 2.297597 AGAACCGTCTCCAGACTTCTTG 59.702 50.000 5.21 0.00 42.66 3.02
5486 11650 3.312828 CGTCTCCAGACTTCTTGAACTG 58.687 50.000 5.21 0.00 42.66 3.16
5517 11687 4.147479 GCATGTGTGTTTAAGTTTAACGCC 59.853 41.667 13.92 7.51 35.65 5.68
5541 11711 1.741401 CAGAGCCGCCGATTTGTCA 60.741 57.895 0.00 0.00 0.00 3.58
5570 11740 4.106029 CTTGCTGAAAGGATTCCATGTG 57.894 45.455 5.29 0.00 30.66 3.21
5808 12059 3.274455 CTCGTCAGCGGCACAGACT 62.274 63.158 14.98 0.00 38.89 3.24
5848 12117 2.038007 AGGGCGAGAAGAGCTCCA 59.962 61.111 10.93 0.00 40.70 3.86
5901 12170 5.220605 GGATTACTTACGCCATTGACAAGAC 60.221 44.000 0.00 0.00 0.00 3.01
5902 12171 3.120321 ACTTACGCCATTGACAAGACA 57.880 42.857 0.00 0.00 0.00 3.41
5903 12172 3.472652 ACTTACGCCATTGACAAGACAA 58.527 40.909 0.00 0.00 0.00 3.18
5904 12173 3.498397 ACTTACGCCATTGACAAGACAAG 59.502 43.478 0.00 0.00 33.22 3.16
5905 12174 1.967319 ACGCCATTGACAAGACAAGT 58.033 45.000 0.00 0.00 33.22 3.16
5906 12175 2.297701 ACGCCATTGACAAGACAAGTT 58.702 42.857 0.00 0.00 33.22 2.66
5912 12182 3.536956 TTGACAAGACAAGTTCGAGGT 57.463 42.857 0.00 0.00 0.00 3.85
5920 12190 1.079127 AAGTTCGAGGTGCCGATGG 60.079 57.895 0.00 0.00 38.45 3.51
5927 12197 4.856801 GGTGCCGATGGTGCCGAT 62.857 66.667 0.00 0.00 0.00 4.18
5928 12198 3.576356 GTGCCGATGGTGCCGATG 61.576 66.667 0.00 0.00 0.00 3.84
5929 12199 3.780173 TGCCGATGGTGCCGATGA 61.780 61.111 0.00 0.00 0.00 2.92
5930 12200 2.513666 GCCGATGGTGCCGATGAA 60.514 61.111 0.00 0.00 0.00 2.57
5932 12202 1.153369 CCGATGGTGCCGATGAAGT 60.153 57.895 0.00 0.00 0.00 3.01
5933 12203 1.154205 CCGATGGTGCCGATGAAGTC 61.154 60.000 0.00 0.00 0.00 3.01
5934 12204 1.154205 CGATGGTGCCGATGAAGTCC 61.154 60.000 0.00 0.00 0.00 3.85
5976 12246 7.860009 TAGCTAAGCTAGGTATCAACCAACCTA 60.860 40.741 0.00 1.57 45.45 3.08
6133 12427 3.160679 ACACAAAATCTGGGAGAAGGG 57.839 47.619 0.00 0.00 30.48 3.95
6138 12432 1.575447 AATCTGGGAGAAGGGTGGCC 61.575 60.000 0.00 0.00 0.00 5.36
6142 12436 2.308722 GGGAGAAGGGTGGCCATCA 61.309 63.158 20.00 0.00 0.00 3.07
6148 12442 0.331616 AAGGGTGGCCATCAGGTAAC 59.668 55.000 20.00 0.00 37.19 2.50
6190 12490 7.745717 AGAGAGTAGAGAACAGCAGAGTATAT 58.254 38.462 0.00 0.00 0.00 0.86
6225 12537 2.171237 TGTTGTCTATGGCTGAGGGATG 59.829 50.000 0.00 0.00 0.00 3.51
6234 12546 1.040339 GCTGAGGGATGTCGAGGTCT 61.040 60.000 0.00 0.00 0.00 3.85
6239 12551 1.030488 GGGATGTCGAGGTCTGACGA 61.030 60.000 1.07 0.00 39.22 4.20
6447 12759 1.881252 GTATGCCCACACGTAGCGG 60.881 63.158 0.00 0.00 0.00 5.52
6647 12960 2.677848 GCCCCTCAACCCTCTTCC 59.322 66.667 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 3534 9.909644 TTCTAGAAGTCTCAGTATTTGTGTTAC 57.090 33.333 0.00 0.00 0.00 2.50
117 3616 9.691795 CGCATAACGTCAACTTGTTATTAAATA 57.308 29.630 0.00 0.00 38.79 1.40
121 3620 5.120363 TGCGCATAACGTCAACTTGTTATTA 59.880 36.000 5.66 0.00 46.11 0.98
127 3626 2.159720 TCATGCGCATAACGTCAACTTG 60.160 45.455 24.84 7.80 46.11 3.16
137 3636 5.295540 TGCTAAGTACAAATCATGCGCATAA 59.704 36.000 24.84 9.90 0.00 1.90
139 3638 3.627123 TGCTAAGTACAAATCATGCGCAT 59.373 39.130 19.28 19.28 0.00 4.73
140 3639 3.006247 TGCTAAGTACAAATCATGCGCA 58.994 40.909 14.96 14.96 0.00 6.09
141 3640 3.673746 TGCTAAGTACAAATCATGCGC 57.326 42.857 0.00 0.00 0.00 6.09
142 3641 4.971830 CCAATGCTAAGTACAAATCATGCG 59.028 41.667 0.00 0.00 0.00 4.73
143 3642 6.135290 TCCAATGCTAAGTACAAATCATGC 57.865 37.500 0.00 0.00 0.00 4.06
205 3711 1.168714 GCGGAAGACCTTTTCAGCAT 58.831 50.000 6.10 0.00 44.32 3.79
244 3751 4.956700 TCTTCTCATCTCCTTGTATCCGTT 59.043 41.667 0.00 0.00 0.00 4.44
247 3760 5.779771 AGGATCTTCTCATCTCCTTGTATCC 59.220 44.000 0.00 0.00 34.42 2.59
304 3822 3.329225 TGTGGTACAATGTGGATTCTCCA 59.671 43.478 0.00 0.00 43.17 3.86
319 3839 7.175641 TCAGTAGTCTAGGTTACTTTGTGGTAC 59.824 40.741 4.84 0.00 0.00 3.34
349 3874 0.320697 GGAGGCACTTGTACCGTCTT 59.679 55.000 0.00 0.00 41.55 3.01
356 3881 1.440618 TTCCCTTGGAGGCACTTGTA 58.559 50.000 0.00 0.00 41.55 2.41
361 3886 0.613012 ATGCTTTCCCTTGGAGGCAC 60.613 55.000 12.63 0.00 41.80 5.01
380 3905 2.158871 AGTGTTGCAAAACTAGGTCCGA 60.159 45.455 20.99 0.00 0.00 4.55
384 3909 3.616219 TGTGAGTGTTGCAAAACTAGGT 58.384 40.909 22.29 0.01 0.00 3.08
449 3975 1.134280 CAAGTTCGGGCTCCATGATCT 60.134 52.381 0.00 0.00 0.00 2.75
467 3993 5.221880 CAAATTCTCAATCTTTGCGGACAA 58.778 37.500 0.00 0.00 0.00 3.18
475 4001 4.262592 GCACACCCCAAATTCTCAATCTTT 60.263 41.667 0.00 0.00 0.00 2.52
476 4002 3.259123 GCACACCCCAAATTCTCAATCTT 59.741 43.478 0.00 0.00 0.00 2.40
478 4004 2.094026 GGCACACCCCAAATTCTCAATC 60.094 50.000 0.00 0.00 0.00 2.67
481 4007 0.187117 TGGCACACCCCAAATTCTCA 59.813 50.000 0.00 0.00 33.59 3.27
485 4011 2.573083 CGCTGGCACACCCCAAATT 61.573 57.895 0.00 0.00 33.73 1.82
487 4013 4.196778 TCGCTGGCACACCCCAAA 62.197 61.111 0.00 0.00 33.73 3.28
513 4039 6.832520 TGCATTTACCTTCTTATCTTGCAA 57.167 33.333 0.00 0.00 34.91 4.08
515 4041 6.036470 GGTTGCATTTACCTTCTTATCTTGC 58.964 40.000 0.00 0.00 32.75 4.01
516 4042 7.156876 TGGTTGCATTTACCTTCTTATCTTG 57.843 36.000 7.54 0.00 36.60 3.02
543 4069 3.225104 AGCTTCTTCATTCCTGTTGCAA 58.775 40.909 0.00 0.00 0.00 4.08
544 4070 2.867624 AGCTTCTTCATTCCTGTTGCA 58.132 42.857 0.00 0.00 0.00 4.08
545 4071 3.254166 TGAAGCTTCTTCATTCCTGTTGC 59.746 43.478 26.09 0.00 0.00 4.17
548 4074 4.077822 CCTTGAAGCTTCTTCATTCCTGT 58.922 43.478 26.09 0.00 0.00 4.00
552 4078 3.119566 CCTGCCTTGAAGCTTCTTCATTC 60.120 47.826 26.09 11.38 0.00 2.67
553 4079 2.824341 CCTGCCTTGAAGCTTCTTCATT 59.176 45.455 26.09 0.00 0.00 2.57
554 4080 2.444421 CCTGCCTTGAAGCTTCTTCAT 58.556 47.619 26.09 0.00 0.00 2.57
577 4103 1.606668 GCCATCAACGGACACTTTCAA 59.393 47.619 0.00 0.00 0.00 2.69
612 4890 1.302832 GTGGAGCCCAGGTTGTCTG 60.303 63.158 0.00 0.00 43.00 3.51
856 5141 4.119862 CACATTACTTACATGAGGACCGG 58.880 47.826 0.00 0.00 0.00 5.28
869 5154 3.515901 GGAGAGAGTCCACCACATTACTT 59.484 47.826 0.00 0.00 46.10 2.24
870 5155 3.100671 GGAGAGAGTCCACCACATTACT 58.899 50.000 0.00 0.00 46.10 2.24
945 5475 2.358737 GAGCGTGTGGGAAGTGGG 60.359 66.667 0.00 0.00 0.00 4.61
1018 5566 2.667418 GAGGAGCAGCAGCAGGAA 59.333 61.111 3.17 0.00 45.49 3.36
1221 5811 2.047443 GCCGAAGAGGTCCTCGTCT 61.047 63.158 26.18 11.15 43.70 4.18
1252 5845 0.031716 CCCTGGGAGGACTCATCTGA 60.032 60.000 7.01 0.00 37.67 3.27
1254 5847 1.383803 GCCCTGGGAGGACTCATCT 60.384 63.158 19.27 0.00 37.67 2.90
1257 5850 4.741239 GGGCCCTGGGAGGACTCA 62.741 72.222 19.27 0.00 37.67 3.41
1580 6325 4.471025 GGAATTGGGGATCTGGTGAAATTT 59.529 41.667 0.00 0.00 0.00 1.82
1587 6332 1.226311 GAGGGAATTGGGGATCTGGT 58.774 55.000 0.00 0.00 0.00 4.00
1643 6419 3.741476 CGTCCCTGCAGCAAAGCC 61.741 66.667 8.66 0.00 0.00 4.35
1864 6650 5.248640 CACTGTATTCTTGGGTCAATCTGT 58.751 41.667 0.00 0.00 0.00 3.41
1899 6727 1.005805 TGGCCACATGAGCTATTTGGT 59.994 47.619 0.00 0.00 38.61 3.67
1948 6808 2.796593 GTGAGAAAAACAGGTGCATTGC 59.203 45.455 0.46 0.46 0.00 3.56
1969 6829 9.681062 TTAAGTTAACAGAATATTCAGGGGAAG 57.319 33.333 17.56 1.50 36.25 3.46
1993 6853 5.705441 GGTTGACATTTCATCCAGTGAGTTA 59.295 40.000 4.40 0.00 40.26 2.24
1994 6854 4.520492 GGTTGACATTTCATCCAGTGAGTT 59.480 41.667 4.40 0.00 40.26 3.01
1998 6858 3.366679 GCAGGTTGACATTTCATCCAGTG 60.367 47.826 10.80 3.63 42.23 3.66
2002 6862 3.194116 ACATGCAGGTTGACATTTCATCC 59.806 43.478 0.00 1.30 40.68 3.51
2058 6922 2.909244 CGATAGCTAAACATACGAGCGG 59.091 50.000 0.00 0.00 41.23 5.52
2088 6952 1.407936 TTAGGTTGCTTGGCTTTGCA 58.592 45.000 0.00 0.00 37.42 4.08
2095 6984 2.487762 TGAAGCGATTTAGGTTGCTTGG 59.512 45.455 6.13 0.00 46.27 3.61
2105 6994 3.256879 TGGGTTGCAATTGAAGCGATTTA 59.743 39.130 10.34 0.00 33.85 1.40
2109 6998 1.067706 CATGGGTTGCAATTGAAGCGA 60.068 47.619 10.34 8.09 33.85 4.93
2110 6999 1.337074 ACATGGGTTGCAATTGAAGCG 60.337 47.619 10.34 1.68 33.85 4.68
2117 7006 2.178580 CTGGGTAACATGGGTTGCAAT 58.821 47.619 0.59 0.00 40.87 3.56
2145 7034 6.855763 TGGAATTCAGGCATTGTATTCTTT 57.144 33.333 7.93 0.00 41.04 2.52
2146 7035 6.351286 GGTTGGAATTCAGGCATTGTATTCTT 60.351 38.462 7.93 0.00 41.04 2.52
2159 7048 3.318839 TGAGTGCTTTGGTTGGAATTCAG 59.681 43.478 7.93 0.00 0.00 3.02
2165 7054 1.955778 CACATGAGTGCTTTGGTTGGA 59.044 47.619 0.00 0.00 39.21 3.53
2166 7055 1.000060 CCACATGAGTGCTTTGGTTGG 60.000 52.381 0.00 0.00 44.53 3.77
2172 7061 3.369042 ATGGCCACATGAGTGCTTT 57.631 47.368 8.16 0.00 44.53 3.51
2187 7076 6.764379 ACTAAATTTGGGGTAACAAACATGG 58.236 36.000 6.50 0.00 42.51 3.66
2188 7077 7.928706 TCAACTAAATTTGGGGTAACAAACATG 59.071 33.333 6.50 0.00 42.51 3.21
2189 7078 7.929245 GTCAACTAAATTTGGGGTAACAAACAT 59.071 33.333 6.50 0.00 42.51 2.71
2190 7079 7.266400 GTCAACTAAATTTGGGGTAACAAACA 58.734 34.615 6.50 0.00 42.51 2.83
2191 7080 6.702723 GGTCAACTAAATTTGGGGTAACAAAC 59.297 38.462 6.50 0.00 42.51 2.93
2192 7081 6.383147 TGGTCAACTAAATTTGGGGTAACAAA 59.617 34.615 6.50 0.00 43.69 2.83
2193 7082 5.897824 TGGTCAACTAAATTTGGGGTAACAA 59.102 36.000 6.50 0.00 39.74 2.83
2194 7083 5.302313 GTGGTCAACTAAATTTGGGGTAACA 59.698 40.000 6.50 0.00 39.74 2.41
2195 7084 5.302313 TGTGGTCAACTAAATTTGGGGTAAC 59.698 40.000 6.50 0.00 0.00 2.50
2196 7085 5.455872 TGTGGTCAACTAAATTTGGGGTAA 58.544 37.500 6.50 0.00 0.00 2.85
2197 7086 5.063017 TGTGGTCAACTAAATTTGGGGTA 57.937 39.130 6.50 0.00 0.00 3.69
2198 7087 3.917300 TGTGGTCAACTAAATTTGGGGT 58.083 40.909 6.50 0.00 0.00 4.95
2199 7088 4.946478 TTGTGGTCAACTAAATTTGGGG 57.054 40.909 6.50 0.00 0.00 4.96
2200 7089 7.437748 TGTATTTGTGGTCAACTAAATTTGGG 58.562 34.615 6.50 0.00 32.93 4.12
2201 7090 8.879342 TTGTATTTGTGGTCAACTAAATTTGG 57.121 30.769 0.00 0.00 32.93 3.28
2203 7092 8.987890 GCATTGTATTTGTGGTCAACTAAATTT 58.012 29.630 0.00 0.00 32.93 1.82
2204 7093 8.147058 TGCATTGTATTTGTGGTCAACTAAATT 58.853 29.630 0.00 0.00 32.93 1.82
2205 7094 7.598493 GTGCATTGTATTTGTGGTCAACTAAAT 59.402 33.333 0.00 0.00 32.93 1.40
2206 7095 6.920758 GTGCATTGTATTTGTGGTCAACTAAA 59.079 34.615 0.00 0.00 32.93 1.85
2207 7096 6.442952 GTGCATTGTATTTGTGGTCAACTAA 58.557 36.000 0.00 0.00 32.93 2.24
2208 7097 5.048364 GGTGCATTGTATTTGTGGTCAACTA 60.048 40.000 0.00 0.00 32.93 2.24
2209 7098 4.261994 GGTGCATTGTATTTGTGGTCAACT 60.262 41.667 0.00 0.00 32.93 3.16
2210 7099 3.987220 GGTGCATTGTATTTGTGGTCAAC 59.013 43.478 0.00 0.00 32.93 3.18
2211 7100 3.894427 AGGTGCATTGTATTTGTGGTCAA 59.106 39.130 0.00 0.00 0.00 3.18
2212 7101 3.255395 CAGGTGCATTGTATTTGTGGTCA 59.745 43.478 0.00 0.00 0.00 4.02
2213 7102 3.255642 ACAGGTGCATTGTATTTGTGGTC 59.744 43.478 5.14 0.00 0.00 4.02
2214 7103 3.230134 ACAGGTGCATTGTATTTGTGGT 58.770 40.909 5.14 0.00 0.00 4.16
2215 7104 3.940209 ACAGGTGCATTGTATTTGTGG 57.060 42.857 5.14 0.00 0.00 4.17
2221 7110 7.682741 GCATTCAGAAATACAGGTGCATTGTAT 60.683 37.037 16.64 16.64 42.06 2.29
2222 7111 6.404623 GCATTCAGAAATACAGGTGCATTGTA 60.405 38.462 14.09 14.09 35.66 2.41
2223 7112 5.622914 GCATTCAGAAATACAGGTGCATTGT 60.623 40.000 11.00 11.00 0.00 2.71
2224 7113 4.802039 GCATTCAGAAATACAGGTGCATTG 59.198 41.667 0.00 0.00 0.00 2.82
2225 7114 4.142093 GGCATTCAGAAATACAGGTGCATT 60.142 41.667 5.29 0.00 33.27 3.56
2226 7115 3.382546 GGCATTCAGAAATACAGGTGCAT 59.617 43.478 5.29 0.00 33.27 3.96
2227 7116 2.754552 GGCATTCAGAAATACAGGTGCA 59.245 45.455 5.29 0.00 33.27 4.57
2228 7117 2.099756 GGGCATTCAGAAATACAGGTGC 59.900 50.000 0.00 0.00 0.00 5.01
2229 7118 3.624777 AGGGCATTCAGAAATACAGGTG 58.375 45.455 0.00 0.00 0.00 4.00
2230 7119 4.019174 CAAGGGCATTCAGAAATACAGGT 58.981 43.478 0.00 0.00 0.00 4.00
2231 7120 4.019174 ACAAGGGCATTCAGAAATACAGG 58.981 43.478 0.00 0.00 0.00 4.00
2232 7121 5.416952 AGAACAAGGGCATTCAGAAATACAG 59.583 40.000 0.00 0.00 0.00 2.74
2233 7122 5.324409 AGAACAAGGGCATTCAGAAATACA 58.676 37.500 0.00 0.00 0.00 2.29
2234 7123 5.904362 AGAACAAGGGCATTCAGAAATAC 57.096 39.130 0.00 0.00 0.00 1.89
2235 7124 6.916360 AAAGAACAAGGGCATTCAGAAATA 57.084 33.333 0.00 0.00 0.00 1.40
2236 7125 5.813513 AAAGAACAAGGGCATTCAGAAAT 57.186 34.783 0.00 0.00 0.00 2.17
2237 7126 5.358922 CAAAAGAACAAGGGCATTCAGAAA 58.641 37.500 0.00 0.00 0.00 2.52
2238 7127 4.740334 GCAAAAGAACAAGGGCATTCAGAA 60.740 41.667 0.00 0.00 0.00 3.02
2239 7128 3.243839 GCAAAAGAACAAGGGCATTCAGA 60.244 43.478 0.00 0.00 0.00 3.27
2240 7129 3.062042 GCAAAAGAACAAGGGCATTCAG 58.938 45.455 0.00 0.00 0.00 3.02
2241 7130 2.699846 AGCAAAAGAACAAGGGCATTCA 59.300 40.909 0.00 0.00 0.00 2.57
2242 7131 3.391506 AGCAAAAGAACAAGGGCATTC 57.608 42.857 0.00 0.00 0.00 2.67
2243 7132 3.469739 CAAGCAAAAGAACAAGGGCATT 58.530 40.909 0.00 0.00 0.00 3.56
2244 7133 2.807837 GCAAGCAAAAGAACAAGGGCAT 60.808 45.455 0.00 0.00 0.00 4.40
2245 7134 1.473080 GCAAGCAAAAGAACAAGGGCA 60.473 47.619 0.00 0.00 0.00 5.36
2246 7135 1.202568 AGCAAGCAAAAGAACAAGGGC 60.203 47.619 0.00 0.00 0.00 5.19
2247 7136 2.101249 TGAGCAAGCAAAAGAACAAGGG 59.899 45.455 0.00 0.00 0.00 3.95
2248 7137 3.118542 GTGAGCAAGCAAAAGAACAAGG 58.881 45.455 0.00 0.00 0.00 3.61
2249 7138 4.037858 AGTGAGCAAGCAAAAGAACAAG 57.962 40.909 0.00 0.00 0.00 3.16
2250 7139 4.640201 AGTAGTGAGCAAGCAAAAGAACAA 59.360 37.500 0.00 0.00 0.00 2.83
2251 7140 4.199310 AGTAGTGAGCAAGCAAAAGAACA 58.801 39.130 0.00 0.00 0.00 3.18
2252 7141 4.820284 AGTAGTGAGCAAGCAAAAGAAC 57.180 40.909 0.00 0.00 0.00 3.01
2253 7142 5.364778 TGTAGTAGTGAGCAAGCAAAAGAA 58.635 37.500 0.00 0.00 0.00 2.52
2254 7143 4.956085 TGTAGTAGTGAGCAAGCAAAAGA 58.044 39.130 0.00 0.00 0.00 2.52
2255 7144 4.752101 ACTGTAGTAGTGAGCAAGCAAAAG 59.248 41.667 0.00 0.00 38.49 2.27
2256 7145 4.703897 ACTGTAGTAGTGAGCAAGCAAAA 58.296 39.130 0.00 0.00 38.49 2.44
2257 7146 4.336889 ACTGTAGTAGTGAGCAAGCAAA 57.663 40.909 0.00 0.00 38.49 3.68
2258 7147 5.060662 CTACTGTAGTAGTGAGCAAGCAA 57.939 43.478 10.25 0.00 42.22 3.91
2259 7148 4.703645 CTACTGTAGTAGTGAGCAAGCA 57.296 45.455 10.25 0.00 42.22 3.91
2274 7163 7.549488 GCAGGTTGACATTTTATCTACTACTGT 59.451 37.037 0.00 0.00 0.00 3.55
2275 7164 7.549134 TGCAGGTTGACATTTTATCTACTACTG 59.451 37.037 0.00 0.00 0.00 2.74
2276 7165 7.620880 TGCAGGTTGACATTTTATCTACTACT 58.379 34.615 0.00 0.00 0.00 2.57
2277 7166 7.843490 TGCAGGTTGACATTTTATCTACTAC 57.157 36.000 0.00 0.00 0.00 2.73
2278 7167 8.046708 ACATGCAGGTTGACATTTTATCTACTA 58.953 33.333 0.00 0.00 0.00 1.82
2279 7168 6.886459 ACATGCAGGTTGACATTTTATCTACT 59.114 34.615 0.00 0.00 0.00 2.57
2280 7169 7.088589 ACATGCAGGTTGACATTTTATCTAC 57.911 36.000 0.00 0.00 0.00 2.59
2281 7170 7.148086 GGAACATGCAGGTTGACATTTTATCTA 60.148 37.037 23.11 0.00 0.00 1.98
2282 7171 6.350445 GGAACATGCAGGTTGACATTTTATCT 60.350 38.462 23.11 0.00 0.00 1.98
2283 7172 5.807011 GGAACATGCAGGTTGACATTTTATC 59.193 40.000 23.11 2.54 0.00 1.75
2284 7173 5.245751 TGGAACATGCAGGTTGACATTTTAT 59.754 36.000 23.11 0.00 0.00 1.40
2285 7174 4.586421 TGGAACATGCAGGTTGACATTTTA 59.414 37.500 23.11 0.00 0.00 1.52
2286 7175 3.387374 TGGAACATGCAGGTTGACATTTT 59.613 39.130 23.11 0.00 0.00 1.82
2287 7176 2.964464 TGGAACATGCAGGTTGACATTT 59.036 40.909 23.11 0.00 0.00 2.32
2288 7177 2.596346 TGGAACATGCAGGTTGACATT 58.404 42.857 23.11 0.00 0.00 2.71
2289 7178 2.291209 TGGAACATGCAGGTTGACAT 57.709 45.000 23.11 0.00 0.00 3.06
2290 7179 3.817187 TGGAACATGCAGGTTGACA 57.183 47.368 23.11 16.89 0.00 3.58
2303 7192 3.609853 TCTCAGCACATGGTAATGGAAC 58.390 45.455 0.00 0.00 38.19 3.62
2304 7193 3.998913 TCTCAGCACATGGTAATGGAA 57.001 42.857 0.00 0.00 38.19 3.53
2305 7194 3.609853 GTTCTCAGCACATGGTAATGGA 58.390 45.455 0.00 0.00 38.19 3.41
2306 7195 2.352651 CGTTCTCAGCACATGGTAATGG 59.647 50.000 0.00 0.00 38.19 3.16
2307 7196 2.352651 CCGTTCTCAGCACATGGTAATG 59.647 50.000 0.00 0.00 39.89 1.90
2308 7197 2.632377 CCGTTCTCAGCACATGGTAAT 58.368 47.619 0.00 0.00 0.00 1.89
2309 7198 1.943968 GCCGTTCTCAGCACATGGTAA 60.944 52.381 0.00 0.00 0.00 2.85
2310 7199 0.391130 GCCGTTCTCAGCACATGGTA 60.391 55.000 0.00 0.00 0.00 3.25
2311 7200 1.672356 GCCGTTCTCAGCACATGGT 60.672 57.895 0.00 0.00 0.00 3.55
2312 7201 1.364626 GAGCCGTTCTCAGCACATGG 61.365 60.000 0.00 0.00 41.51 3.66
2313 7202 1.364626 GGAGCCGTTCTCAGCACATG 61.365 60.000 0.00 0.00 43.70 3.21
2314 7203 1.078848 GGAGCCGTTCTCAGCACAT 60.079 57.895 4.63 0.00 43.70 3.21
2315 7204 2.343758 GGAGCCGTTCTCAGCACA 59.656 61.111 4.63 0.00 43.70 4.57
2316 7205 2.435059 GGGAGCCGTTCTCAGCAC 60.435 66.667 4.63 0.00 43.70 4.40
2317 7206 2.922503 TGGGAGCCGTTCTCAGCA 60.923 61.111 4.63 0.00 43.70 4.41
2318 7207 2.125350 CTGGGAGCCGTTCTCAGC 60.125 66.667 0.00 0.00 46.93 4.26
2320 7209 1.900351 CATCTGGGAGCCGTTCTCA 59.100 57.895 4.63 0.00 43.70 3.27
2321 7210 1.522580 GCATCTGGGAGCCGTTCTC 60.523 63.158 0.00 0.00 41.15 2.87
2322 7211 2.586792 GCATCTGGGAGCCGTTCT 59.413 61.111 0.00 0.00 0.00 3.01
2323 7212 2.892425 CGCATCTGGGAGCCGTTC 60.892 66.667 0.00 0.00 0.00 3.95
2327 7216 2.104572 TATGAGCGCATCTGGGAGCC 62.105 60.000 11.47 0.00 35.94 4.70
2328 7217 0.036577 ATATGAGCGCATCTGGGAGC 60.037 55.000 11.47 0.00 35.94 4.70
2329 7218 1.001746 ACATATGAGCGCATCTGGGAG 59.998 52.381 17.70 2.52 34.06 4.30
2330 7219 1.051008 ACATATGAGCGCATCTGGGA 58.949 50.000 17.70 0.00 34.06 4.37
2331 7220 1.888215 AACATATGAGCGCATCTGGG 58.112 50.000 17.70 5.22 34.06 4.45
2332 7221 3.120408 GCTAAACATATGAGCGCATCTGG 60.120 47.826 17.70 7.38 34.06 3.86
2333 7222 3.744942 AGCTAAACATATGAGCGCATCTG 59.255 43.478 11.47 10.33 41.23 2.90
2334 7223 4.000331 AGCTAAACATATGAGCGCATCT 58.000 40.909 11.47 0.00 41.23 2.90
2335 7224 5.276114 CGATAGCTAAACATATGAGCGCATC 60.276 44.000 11.47 13.75 41.23 3.91
2336 7225 4.564372 CGATAGCTAAACATATGAGCGCAT 59.436 41.667 11.47 8.35 41.23 4.73
2337 7226 3.920412 CGATAGCTAAACATATGAGCGCA 59.080 43.478 11.47 0.00 41.23 6.09
2338 7227 3.304559 CCGATAGCTAAACATATGAGCGC 59.695 47.826 10.38 0.00 41.23 5.92
2339 7228 4.559251 GTCCGATAGCTAAACATATGAGCG 59.441 45.833 10.38 0.00 41.23 5.03
2340 7229 5.346281 GTGTCCGATAGCTAAACATATGAGC 59.654 44.000 10.38 8.26 36.42 4.26
2341 7230 6.682746 AGTGTCCGATAGCTAAACATATGAG 58.317 40.000 10.38 0.00 0.00 2.90
2342 7231 6.650427 AGTGTCCGATAGCTAAACATATGA 57.350 37.500 10.38 0.00 0.00 2.15
2343 7232 6.346919 GCAAGTGTCCGATAGCTAAACATATG 60.347 42.308 0.00 0.00 0.00 1.78
2344 7233 5.696724 GCAAGTGTCCGATAGCTAAACATAT 59.303 40.000 0.00 0.00 0.00 1.78
2345 7234 5.047847 GCAAGTGTCCGATAGCTAAACATA 58.952 41.667 0.00 0.00 0.00 2.29
2346 7235 3.871594 GCAAGTGTCCGATAGCTAAACAT 59.128 43.478 0.00 0.00 0.00 2.71
2347 7236 3.259064 GCAAGTGTCCGATAGCTAAACA 58.741 45.455 0.00 0.00 0.00 2.83
2348 7237 3.259064 TGCAAGTGTCCGATAGCTAAAC 58.741 45.455 0.00 0.00 0.00 2.01
2349 7238 3.603158 TGCAAGTGTCCGATAGCTAAA 57.397 42.857 0.00 0.00 0.00 1.85
2350 7239 3.819564 ATGCAAGTGTCCGATAGCTAA 57.180 42.857 0.00 0.00 0.00 3.09
2351 7240 6.015772 TGTTATATGCAAGTGTCCGATAGCTA 60.016 38.462 0.00 0.00 0.00 3.32
2352 7241 5.221441 TGTTATATGCAAGTGTCCGATAGCT 60.221 40.000 0.00 0.00 0.00 3.32
2353 7242 4.988540 TGTTATATGCAAGTGTCCGATAGC 59.011 41.667 0.00 0.00 0.00 2.97
2354 7243 7.171508 ACAATGTTATATGCAAGTGTCCGATAG 59.828 37.037 0.00 0.00 0.00 2.08
2355 7244 6.989759 ACAATGTTATATGCAAGTGTCCGATA 59.010 34.615 0.00 0.00 0.00 2.92
2356 7245 5.822519 ACAATGTTATATGCAAGTGTCCGAT 59.177 36.000 0.00 0.00 0.00 4.18
2357 7246 5.064579 CACAATGTTATATGCAAGTGTCCGA 59.935 40.000 0.00 0.00 0.00 4.55
2358 7247 5.064579 TCACAATGTTATATGCAAGTGTCCG 59.935 40.000 0.00 0.00 31.99 4.79
2359 7248 6.435430 TCACAATGTTATATGCAAGTGTCC 57.565 37.500 0.00 0.00 31.99 4.02
2402 7291 5.716228 TGAGCACCCTAAAACATTCAATGAT 59.284 36.000 3.79 0.00 0.00 2.45
2407 7296 4.640201 GCTATGAGCACCCTAAAACATTCA 59.360 41.667 0.00 0.00 41.89 2.57
2408 7297 4.260784 CGCTATGAGCACCCTAAAACATTC 60.261 45.833 0.00 0.00 42.58 2.67
2413 7302 3.133901 TCATCGCTATGAGCACCCTAAAA 59.866 43.478 0.00 0.00 42.58 1.52
2415 7304 2.316108 TCATCGCTATGAGCACCCTAA 58.684 47.619 0.00 0.00 42.58 2.69
2436 7335 2.479650 CTCGAAGCAGCAGCAAGC 59.520 61.111 3.17 0.00 45.49 4.01
2437 7336 3.036783 GCCTCGAAGCAGCAGCAAG 62.037 63.158 3.17 0.00 45.49 4.01
2438 7337 3.052082 GCCTCGAAGCAGCAGCAA 61.052 61.111 3.17 0.00 45.49 3.91
2439 7338 3.541950 AAGCCTCGAAGCAGCAGCA 62.542 57.895 9.03 0.00 45.49 4.41
2440 7339 2.745492 AAGCCTCGAAGCAGCAGC 60.745 61.111 9.03 0.00 42.56 5.25
2441 7340 0.952497 TTCAAGCCTCGAAGCAGCAG 60.952 55.000 9.03 0.00 34.23 4.24
2442 7341 0.321919 ATTCAAGCCTCGAAGCAGCA 60.322 50.000 9.03 0.00 34.23 4.41
2443 7342 0.807496 AATTCAAGCCTCGAAGCAGC 59.193 50.000 9.03 0.00 34.23 5.25
2444 7343 1.467035 GCAATTCAAGCCTCGAAGCAG 60.467 52.381 9.03 0.29 34.23 4.24
2445 7344 0.523072 GCAATTCAAGCCTCGAAGCA 59.477 50.000 9.03 0.00 34.23 3.91
2446 7345 0.523072 TGCAATTCAAGCCTCGAAGC 59.477 50.000 0.00 0.00 0.00 3.86
2447 7346 2.030893 TGTTGCAATTCAAGCCTCGAAG 60.031 45.455 0.59 0.00 34.91 3.79
2448 7347 1.952990 TGTTGCAATTCAAGCCTCGAA 59.047 42.857 0.59 0.00 34.91 3.71
2449 7348 1.603456 TGTTGCAATTCAAGCCTCGA 58.397 45.000 0.59 0.00 34.91 4.04
2450 7349 2.053627 GTTGTTGCAATTCAAGCCTCG 58.946 47.619 0.59 0.00 34.91 4.63
2451 7350 2.224018 TGGTTGTTGCAATTCAAGCCTC 60.224 45.455 21.96 5.09 40.06 4.70
2452 7351 1.761784 TGGTTGTTGCAATTCAAGCCT 59.238 42.857 21.96 0.00 40.06 4.58
2453 7352 2.237393 TGGTTGTTGCAATTCAAGCC 57.763 45.000 21.96 16.28 40.06 4.35
2466 7365 0.041535 ATGGCCACATGGATGGTTGT 59.958 50.000 8.16 0.00 42.28 3.32
2501 7405 7.040062 ATGGAACAGACGAAATGTAATTTTGGA 60.040 33.333 0.00 0.00 46.25 3.53
2502 7406 7.062138 CATGGAACAGACGAAATGTAATTTTGG 59.938 37.037 0.00 0.00 46.25 3.28
2503 7407 7.807433 TCATGGAACAGACGAAATGTAATTTTG 59.193 33.333 0.00 0.00 46.25 2.44
2504 7408 7.881142 TCATGGAACAGACGAAATGTAATTTT 58.119 30.769 0.00 0.00 46.25 1.82
2521 7428 3.760684 AGTGAGCAAAGGAATCATGGAAC 59.239 43.478 0.00 0.00 0.00 3.62
2523 7430 3.726557 AGTGAGCAAAGGAATCATGGA 57.273 42.857 0.00 0.00 0.00 3.41
2526 7433 6.798427 TCTAGTAGTGAGCAAAGGAATCAT 57.202 37.500 0.00 0.00 0.00 2.45
2533 7440 9.371136 TGACATTTTATCTAGTAGTGAGCAAAG 57.629 33.333 0.00 0.00 0.00 2.77
2540 7447 7.549134 TGCAGGTTGACATTTTATCTAGTAGTG 59.451 37.037 0.00 0.00 0.00 2.74
2541 7448 7.620880 TGCAGGTTGACATTTTATCTAGTAGT 58.379 34.615 0.00 0.00 0.00 2.73
2801 8398 4.947147 ACGGGCGCTTTGCTTCCA 62.947 61.111 7.64 0.00 45.43 3.53
3202 8800 1.333619 GACTCCTTCGCAACAGCAAAA 59.666 47.619 0.00 0.00 0.00 2.44
3244 8842 6.073440 CCTTGAATGATTTTGCTGTTTCCTTG 60.073 38.462 0.00 0.00 0.00 3.61
3305 8904 4.202264 ACGACAGAGGAAAGAAGTTCATGT 60.202 41.667 5.50 0.00 38.06 3.21
3337 8936 7.284034 AGTGATGGCTTGGATTTGAGTATAAAG 59.716 37.037 0.00 0.00 0.00 1.85
3508 9113 1.345741 ACTGTGGTCTCATGTCCAGTG 59.654 52.381 7.13 6.28 32.36 3.66
3517 9122 2.540383 AGAGGCATTACTGTGGTCTCA 58.460 47.619 11.33 0.00 0.00 3.27
3526 9131 5.076873 TGGCAAAAAGTAAGAGGCATTACT 58.923 37.500 8.77 8.77 45.67 2.24
3632 9255 5.244785 AGCAATCAAATCAGCATGTACAG 57.755 39.130 0.33 0.00 37.40 2.74
3652 9275 2.034558 TGTAAGCAAGAACCTGCAAAGC 59.965 45.455 0.00 0.00 45.18 3.51
3876 9676 6.575267 TGTAGCACGGTATAAGCAGAAATAA 58.425 36.000 0.00 0.00 0.00 1.40
3899 9699 3.708890 TGCAAGTTTCTGAAGCAACATG 58.291 40.909 7.01 0.00 31.42 3.21
3926 9726 8.585471 AAAGATGAGAAAATGTACATGGACAT 57.415 30.769 18.31 18.31 41.92 3.06
3927 9727 7.148423 CGAAAGATGAGAAAATGTACATGGACA 60.148 37.037 14.51 14.51 0.00 4.02
3928 9728 7.182761 CGAAAGATGAGAAAATGTACATGGAC 58.817 38.462 9.63 0.00 0.00 4.02
3929 9729 6.183360 GCGAAAGATGAGAAAATGTACATGGA 60.183 38.462 9.63 0.00 0.00 3.41
3930 9730 5.967674 GCGAAAGATGAGAAAATGTACATGG 59.032 40.000 9.63 0.00 0.00 3.66
3931 9731 5.967674 GGCGAAAGATGAGAAAATGTACATG 59.032 40.000 9.63 0.00 0.00 3.21
3959 9759 5.047021 AGCATCTTCTACAGACAAGTGCTAA 60.047 40.000 0.00 0.00 36.29 3.09
3987 9787 5.601583 TCGGCAATGACTATAGTGGTTAA 57.398 39.130 10.90 0.00 0.00 2.01
3988 9788 5.801531 ATCGGCAATGACTATAGTGGTTA 57.198 39.130 10.90 0.00 0.00 2.85
3989 9789 4.689612 ATCGGCAATGACTATAGTGGTT 57.310 40.909 10.90 1.80 0.00 3.67
4227 10073 8.173775 CAGAAAGAATGTCTTATTGCTGTGTAG 58.826 37.037 0.00 0.00 35.27 2.74
4254 10100 2.105993 TCCTCATCATTCTGCATGGGAG 59.894 50.000 0.00 0.00 35.81 4.30
4391 10244 1.089481 CGGCGTTATGGACAGCACAT 61.089 55.000 0.00 0.00 32.08 3.21
4538 10391 2.093306 CACGAGGGTGCTCATTGTTA 57.907 50.000 0.00 0.00 37.35 2.41
4643 10510 3.875727 CAGCTTCTATGACTGTTGATGGG 59.124 47.826 0.00 0.00 0.00 4.00
4662 10529 8.854979 TGTTTCATATAAAATGCATGTACAGC 57.145 30.769 0.00 6.05 0.00 4.40
4775 10643 3.726607 CAGCAGACAGATAATGGACCTC 58.273 50.000 0.00 0.00 0.00 3.85
4830 10781 7.257790 ACTGTAGCATATGGATAAATAGGCA 57.742 36.000 4.56 0.00 41.20 4.75
4896 10847 1.396607 ATAGATGGTACGCACGGGCA 61.397 55.000 11.77 0.00 41.24 5.36
5011 11057 1.676014 GCGGTGATATGGCACTATCCC 60.676 57.143 11.73 11.14 38.78 3.85
5030 11076 0.461961 ACTCAGCGAGATAACCAGGC 59.538 55.000 11.64 0.00 33.32 4.85
5098 11222 1.650528 ATCGGGGAATCAGATCCTCC 58.349 55.000 0.00 0.00 36.54 4.30
5099 11223 3.165875 TGTATCGGGGAATCAGATCCTC 58.834 50.000 0.00 0.00 39.57 3.71
5230 11354 6.577103 TCAGTATTCTGGAAAGTCTGCATAG 58.423 40.000 0.00 0.00 41.59 2.23
5231 11355 6.544928 TCAGTATTCTGGAAAGTCTGCATA 57.455 37.500 0.00 0.00 41.59 3.14
5233 11357 4.890158 TCAGTATTCTGGAAAGTCTGCA 57.110 40.909 0.00 0.00 41.59 4.41
5234 11358 4.574013 CCATCAGTATTCTGGAAAGTCTGC 59.426 45.833 0.00 0.00 41.59 4.26
5235 11359 5.982356 TCCATCAGTATTCTGGAAAGTCTG 58.018 41.667 0.00 0.00 41.59 3.51
5236 11360 6.627087 TTCCATCAGTATTCTGGAAAGTCT 57.373 37.500 0.91 0.00 44.06 3.24
5477 11641 4.756642 CACATGCTTTAGGTCAGTTCAAGA 59.243 41.667 0.00 0.00 0.00 3.02
5481 11645 3.815401 ACACACATGCTTTAGGTCAGTTC 59.185 43.478 0.00 0.00 0.00 3.01
5486 11650 6.313744 ACTTAAACACACATGCTTTAGGTC 57.686 37.500 0.00 0.00 0.00 3.85
5517 11687 2.978452 AATCGGCGGCTCTGAATCGG 62.978 60.000 7.21 0.00 32.98 4.18
5532 11702 1.328680 CAAGGAGCCGATGACAAATCG 59.671 52.381 0.82 0.82 40.86 3.34
5808 12059 0.171231 CCGTCGAGCTTGAGTCATCA 59.829 55.000 3.10 0.00 0.00 3.07
5901 12170 1.361668 CCATCGGCACCTCGAACTTG 61.362 60.000 0.00 0.00 42.69 3.16
5902 12171 1.079127 CCATCGGCACCTCGAACTT 60.079 57.895 0.00 0.00 42.69 2.66
5903 12172 2.283529 ACCATCGGCACCTCGAACT 61.284 57.895 0.00 0.00 42.69 3.01
5904 12173 2.100631 CACCATCGGCACCTCGAAC 61.101 63.158 0.00 0.00 42.69 3.95
5905 12174 2.264480 CACCATCGGCACCTCGAA 59.736 61.111 0.00 0.00 42.69 3.71
5906 12175 4.451150 GCACCATCGGCACCTCGA 62.451 66.667 0.00 0.00 43.61 4.04
5912 12182 3.322318 TTCATCGGCACCATCGGCA 62.322 57.895 0.00 0.00 0.00 5.69
5920 12190 1.519455 CCTCGGACTTCATCGGCAC 60.519 63.158 0.00 0.00 0.00 5.01
5927 12197 1.257743 CTTCTCCACCTCGGACTTCA 58.742 55.000 0.00 0.00 39.64 3.02
5928 12198 0.533032 CCTTCTCCACCTCGGACTTC 59.467 60.000 0.00 0.00 39.64 3.01
5929 12199 0.114560 TCCTTCTCCACCTCGGACTT 59.885 55.000 0.00 0.00 39.64 3.01
5930 12200 0.114560 TTCCTTCTCCACCTCGGACT 59.885 55.000 0.00 0.00 39.64 3.85
5932 12202 2.667470 CTATTCCTTCTCCACCTCGGA 58.333 52.381 0.00 0.00 43.61 4.55
5933 12203 1.069358 GCTATTCCTTCTCCACCTCGG 59.931 57.143 0.00 0.00 0.00 4.63
5934 12204 2.035632 AGCTATTCCTTCTCCACCTCG 58.964 52.381 0.00 0.00 0.00 4.63
5976 12246 0.393537 GCATACACTTCCAGCAGCCT 60.394 55.000 0.00 0.00 0.00 4.58
6107 12385 6.261826 CCTTCTCCCAGATTTTGTGTATGATC 59.738 42.308 0.00 0.00 0.00 2.92
6108 12386 6.125029 CCTTCTCCCAGATTTTGTGTATGAT 58.875 40.000 0.00 0.00 0.00 2.45
6133 12427 0.328258 ACCAGTTACCTGATGGCCAC 59.672 55.000 8.16 2.36 41.50 5.01
6138 12432 7.952671 ACTGTACATATACCAGTTACCTGATG 58.047 38.462 0.00 0.00 41.50 3.07
6142 12436 9.352191 CTCTTACTGTACATATACCAGTTACCT 57.648 37.037 0.00 0.00 30.36 3.08
6148 12442 9.999660 TCTACTCTCTTACTGTACATATACCAG 57.000 37.037 0.00 0.00 0.00 4.00
6149 12443 9.999660 CTCTACTCTCTTACTGTACATATACCA 57.000 37.037 0.00 0.00 0.00 3.25
6647 12960 3.750652 GGAAGAACAAGAAGCAAGAGAGG 59.249 47.826 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.