Multiple sequence alignment - TraesCS5D01G558400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G558400 chr5D 100.000 3359 0 0 1 3359 560223825 560227183 0.000000e+00 6204.0
1 TraesCS5D01G558400 chr5D 86.441 236 26 5 41 273 364239943 364239711 1.550000e-63 254.0
2 TraesCS5D01G558400 chr5B 89.060 1234 71 25 947 2128 710608397 710609618 0.000000e+00 1472.0
3 TraesCS5D01G558400 chr5B 89.834 1082 45 31 2313 3359 710609857 710610908 0.000000e+00 1328.0
4 TraesCS5D01G558400 chr5B 83.861 316 37 10 616 921 24680340 24680029 4.240000e-74 289.0
5 TraesCS5D01G558400 chr5B 88.966 145 6 6 2942 3085 553578770 553578905 1.600000e-38 171.0
6 TraesCS5D01G558400 chr4A 89.965 1156 59 16 1044 2153 604105225 604104081 0.000000e+00 1439.0
7 TraesCS5D01G558400 chr4A 86.394 904 44 32 2166 3058 604104028 604103193 0.000000e+00 915.0
8 TraesCS5D01G558400 chr4A 81.478 1015 134 34 1085 2053 663696131 663695125 0.000000e+00 784.0
9 TraesCS5D01G558400 chr4A 90.244 287 14 4 3081 3359 604103129 604102849 2.460000e-96 363.0
10 TraesCS5D01G558400 chr4A 83.438 320 34 11 616 922 629299951 629300264 2.550000e-71 279.0
11 TraesCS5D01G558400 chr4A 90.291 206 13 7 616 818 743381116 743381317 2.570000e-66 263.0
12 TraesCS5D01G558400 chr4A 82.528 269 37 9 7 271 659091970 659092232 9.380000e-56 228.0
13 TraesCS5D01G558400 chr4A 98.611 72 1 0 925 996 604105297 604105226 9.780000e-26 128.0
14 TraesCS5D01G558400 chr3B 83.393 1126 133 21 1044 2129 700073346 700072235 0.000000e+00 994.0
15 TraesCS5D01G558400 chr3B 83.046 1103 132 25 1048 2111 700234815 700235901 0.000000e+00 950.0
16 TraesCS5D01G558400 chr3A 82.281 1219 141 35 950 2123 663441906 663440718 0.000000e+00 985.0
17 TraesCS5D01G558400 chr3A 81.533 1213 154 32 952 2123 663452043 663450860 0.000000e+00 935.0
18 TraesCS5D01G558400 chr3A 81.985 272 38 10 7 273 436460858 436461123 1.570000e-53 220.0
19 TraesCS5D01G558400 chr3A 83.523 176 27 2 7 180 496510324 496510149 2.680000e-36 163.0
20 TraesCS5D01G558400 chr3D 83.673 1078 133 19 1085 2123 529496489 529495416 0.000000e+00 976.0
21 TraesCS5D01G558400 chr3D 81.911 1078 150 23 1072 2123 529503752 529502694 0.000000e+00 869.0
22 TraesCS5D01G558400 chr2B 80.661 998 129 44 1097 2053 25069208 25070182 0.000000e+00 715.0
23 TraesCS5D01G558400 chr2B 100.000 29 0 0 586 614 755337457 755337485 2.000000e-03 54.7
24 TraesCS5D01G558400 chr2D 80.180 999 141 30 1097 2053 13770230 13771213 0.000000e+00 695.0
25 TraesCS5D01G558400 chr2D 86.916 321 23 10 616 922 83534280 83534595 3.210000e-90 342.0
26 TraesCS5D01G558400 chr2D 88.966 145 6 4 2942 3085 72816070 72815935 1.600000e-38 171.0
27 TraesCS5D01G558400 chr2D 86.111 144 10 4 2943 3085 254761596 254761730 2.700000e-31 147.0
28 TraesCS5D01G558400 chr6A 78.145 938 151 39 1082 1982 147252850 147253770 6.340000e-152 547.0
29 TraesCS5D01G558400 chr6A 86.891 267 30 5 9 271 596578829 596578564 9.110000e-76 294.0
30 TraesCS5D01G558400 chr6A 85.455 165 6 9 2944 3099 376696583 376696428 4.490000e-34 156.0
31 TraesCS5D01G558400 chr6B 77.375 937 158 39 1085 1982 210608357 210609278 1.080000e-139 507.0
32 TraesCS5D01G558400 chr6B 85.496 262 34 4 7 266 1401008 1401267 1.540000e-68 270.0
33 TraesCS5D01G558400 chr4D 84.830 323 28 14 616 922 351453717 351454034 4.210000e-79 305.0
34 TraesCS5D01G558400 chr4D 86.585 246 29 4 9 251 40556006 40555762 5.520000e-68 268.0
35 TraesCS5D01G558400 chr4D 87.255 204 21 4 73 271 11164295 11164092 9.380000e-56 228.0
36 TraesCS5D01G558400 chr1D 84.062 320 36 12 616 923 482241857 482241541 9.110000e-76 294.0
37 TraesCS5D01G558400 chr4B 82.866 321 35 16 616 922 112033245 112032931 1.540000e-68 270.0
38 TraesCS5D01G558400 chr7A 90.196 204 13 7 616 818 689262353 689262550 3.320000e-65 259.0
39 TraesCS5D01G558400 chr7A 100.000 28 0 0 587 614 9147671 9147644 6.000000e-03 52.8
40 TraesCS5D01G558400 chr1A 90.196 204 13 7 616 818 104377122 104376925 3.320000e-65 259.0
41 TraesCS5D01G558400 chr1A 88.276 145 7 3 2942 3085 425423015 425422880 7.460000e-37 165.0
42 TraesCS5D01G558400 chr7B 83.513 279 32 8 7 273 454795037 454795313 7.200000e-62 248.0
43 TraesCS5D01G558400 chr7B 82.721 272 39 8 7 274 679890992 679890725 5.600000e-58 235.0
44 TraesCS5D01G558400 chr7B 81.065 169 21 2 7 164 746592385 746592553 1.270000e-24 124.0
45 TraesCS5D01G558400 chrUn 88.276 145 7 4 2942 3085 184901128 184900993 7.460000e-37 165.0
46 TraesCS5D01G558400 chrUn 86.111 144 10 4 2943 3085 343091603 343091737 2.700000e-31 147.0
47 TraesCS5D01G558400 chrUn 86.014 143 10 4 2944 3085 343094068 343094201 9.710000e-31 145.0
48 TraesCS5D01G558400 chr7D 86.986 146 8 7 2942 3085 593569021 593568885 1.610000e-33 154.0
49 TraesCS5D01G558400 chr2A 100.000 29 0 0 586 614 50976023 50976051 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G558400 chr5D 560223825 560227183 3358 False 6204.00 6204 100.0000 1 3359 1 chr5D.!!$F1 3358
1 TraesCS5D01G558400 chr5B 710608397 710610908 2511 False 1400.00 1472 89.4470 947 3359 2 chr5B.!!$F2 2412
2 TraesCS5D01G558400 chr4A 663695125 663696131 1006 True 784.00 784 81.4780 1085 2053 1 chr4A.!!$R1 968
3 TraesCS5D01G558400 chr4A 604102849 604105297 2448 True 711.25 1439 91.3035 925 3359 4 chr4A.!!$R2 2434
4 TraesCS5D01G558400 chr3B 700072235 700073346 1111 True 994.00 994 83.3930 1044 2129 1 chr3B.!!$R1 1085
5 TraesCS5D01G558400 chr3B 700234815 700235901 1086 False 950.00 950 83.0460 1048 2111 1 chr3B.!!$F1 1063
6 TraesCS5D01G558400 chr3A 663440718 663441906 1188 True 985.00 985 82.2810 950 2123 1 chr3A.!!$R2 1173
7 TraesCS5D01G558400 chr3A 663450860 663452043 1183 True 935.00 935 81.5330 952 2123 1 chr3A.!!$R3 1171
8 TraesCS5D01G558400 chr3D 529495416 529496489 1073 True 976.00 976 83.6730 1085 2123 1 chr3D.!!$R1 1038
9 TraesCS5D01G558400 chr3D 529502694 529503752 1058 True 869.00 869 81.9110 1072 2123 1 chr3D.!!$R2 1051
10 TraesCS5D01G558400 chr2B 25069208 25070182 974 False 715.00 715 80.6610 1097 2053 1 chr2B.!!$F1 956
11 TraesCS5D01G558400 chr2D 13770230 13771213 983 False 695.00 695 80.1800 1097 2053 1 chr2D.!!$F1 956
12 TraesCS5D01G558400 chr6A 147252850 147253770 920 False 547.00 547 78.1450 1082 1982 1 chr6A.!!$F1 900
13 TraesCS5D01G558400 chr6B 210608357 210609278 921 False 507.00 507 77.3750 1085 1982 1 chr6B.!!$F2 897

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
885 886 0.108138 ACGTGTGCATAGCTTCCTCC 60.108 55.0 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2617 2820 0.854908 TGGTGGATGGATGGATGCAT 59.145 50.0 0.0 0.0 41.76 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.161855 CTAGTGTAAGGGCATGTCTAATGA 57.838 41.667 0.00 0.00 0.00 2.57
24 25 5.636903 AGTGTAAGGGCATGTCTAATGAT 57.363 39.130 0.00 0.00 0.00 2.45
25 26 5.371526 AGTGTAAGGGCATGTCTAATGATG 58.628 41.667 0.00 0.00 0.00 3.07
26 27 4.023707 GTGTAAGGGCATGTCTAATGATGC 60.024 45.833 0.00 0.00 43.60 3.91
27 28 3.589951 AAGGGCATGTCTAATGATGCT 57.410 42.857 0.00 0.00 43.77 3.79
28 29 4.712051 AAGGGCATGTCTAATGATGCTA 57.288 40.909 0.00 0.00 43.77 3.49
29 30 4.923516 AGGGCATGTCTAATGATGCTAT 57.076 40.909 0.00 0.00 43.77 2.97
30 31 5.252586 AGGGCATGTCTAATGATGCTATT 57.747 39.130 0.00 0.00 43.77 1.73
31 32 5.638133 AGGGCATGTCTAATGATGCTATTT 58.362 37.500 0.00 0.00 43.77 1.40
32 33 6.073314 AGGGCATGTCTAATGATGCTATTTT 58.927 36.000 0.00 0.00 43.77 1.82
33 34 7.233632 AGGGCATGTCTAATGATGCTATTTTA 58.766 34.615 0.00 0.00 43.77 1.52
34 35 7.392673 AGGGCATGTCTAATGATGCTATTTTAG 59.607 37.037 0.00 0.00 43.77 1.85
35 36 7.362401 GGGCATGTCTAATGATGCTATTTTAGG 60.362 40.741 0.00 0.00 43.77 2.69
36 37 7.391554 GGCATGTCTAATGATGCTATTTTAGGA 59.608 37.037 0.00 0.00 43.77 2.94
37 38 8.449397 GCATGTCTAATGATGCTATTTTAGGAG 58.551 37.037 0.00 0.00 41.52 3.69
38 39 9.499479 CATGTCTAATGATGCTATTTTAGGAGT 57.501 33.333 0.00 0.00 0.00 3.85
39 40 8.893219 TGTCTAATGATGCTATTTTAGGAGTG 57.107 34.615 0.00 0.00 0.00 3.51
40 41 8.704668 TGTCTAATGATGCTATTTTAGGAGTGA 58.295 33.333 0.00 0.00 0.00 3.41
41 42 8.983724 GTCTAATGATGCTATTTTAGGAGTGAC 58.016 37.037 0.00 0.00 0.00 3.67
42 43 8.704668 TCTAATGATGCTATTTTAGGAGTGACA 58.295 33.333 0.00 0.00 0.00 3.58
43 44 9.499479 CTAATGATGCTATTTTAGGAGTGACAT 57.501 33.333 0.00 0.00 0.00 3.06
44 45 7.741027 ATGATGCTATTTTAGGAGTGACATG 57.259 36.000 0.00 0.00 0.00 3.21
45 46 6.653020 TGATGCTATTTTAGGAGTGACATGT 58.347 36.000 0.00 0.00 0.00 3.21
46 47 7.791029 TGATGCTATTTTAGGAGTGACATGTA 58.209 34.615 0.00 0.00 0.00 2.29
47 48 7.928167 TGATGCTATTTTAGGAGTGACATGTAG 59.072 37.037 0.00 0.00 0.00 2.74
48 49 6.582636 TGCTATTTTAGGAGTGACATGTAGG 58.417 40.000 0.00 0.00 0.00 3.18
49 50 6.382859 TGCTATTTTAGGAGTGACATGTAGGA 59.617 38.462 0.00 0.00 0.00 2.94
50 51 7.071196 TGCTATTTTAGGAGTGACATGTAGGAT 59.929 37.037 0.00 0.00 0.00 3.24
51 52 8.585881 GCTATTTTAGGAGTGACATGTAGGATA 58.414 37.037 0.00 0.00 0.00 2.59
55 56 9.613428 TTTTAGGAGTGACATGTAGGATAAATG 57.387 33.333 0.00 0.00 42.16 2.32
65 66 7.864108 CATGTAGGATAAATGTTGAGGTGAA 57.136 36.000 0.00 0.00 31.47 3.18
66 67 7.923888 CATGTAGGATAAATGTTGAGGTGAAG 58.076 38.462 0.00 0.00 31.47 3.02
67 68 6.414732 TGTAGGATAAATGTTGAGGTGAAGG 58.585 40.000 0.00 0.00 0.00 3.46
68 69 5.779241 AGGATAAATGTTGAGGTGAAGGA 57.221 39.130 0.00 0.00 0.00 3.36
69 70 5.749462 AGGATAAATGTTGAGGTGAAGGAG 58.251 41.667 0.00 0.00 0.00 3.69
70 71 5.488919 AGGATAAATGTTGAGGTGAAGGAGA 59.511 40.000 0.00 0.00 0.00 3.71
71 72 6.012508 AGGATAAATGTTGAGGTGAAGGAGAA 60.013 38.462 0.00 0.00 0.00 2.87
72 73 6.659242 GGATAAATGTTGAGGTGAAGGAGAAA 59.341 38.462 0.00 0.00 0.00 2.52
73 74 7.148171 GGATAAATGTTGAGGTGAAGGAGAAAG 60.148 40.741 0.00 0.00 0.00 2.62
74 75 4.982241 ATGTTGAGGTGAAGGAGAAAGA 57.018 40.909 0.00 0.00 0.00 2.52
75 76 4.771114 TGTTGAGGTGAAGGAGAAAGAA 57.229 40.909 0.00 0.00 0.00 2.52
76 77 5.110814 TGTTGAGGTGAAGGAGAAAGAAA 57.889 39.130 0.00 0.00 0.00 2.52
77 78 5.694995 TGTTGAGGTGAAGGAGAAAGAAAT 58.305 37.500 0.00 0.00 0.00 2.17
78 79 5.765182 TGTTGAGGTGAAGGAGAAAGAAATC 59.235 40.000 0.00 0.00 0.00 2.17
79 80 5.567037 TGAGGTGAAGGAGAAAGAAATCA 57.433 39.130 0.00 0.00 0.00 2.57
80 81 6.131972 TGAGGTGAAGGAGAAAGAAATCAT 57.868 37.500 0.00 0.00 0.00 2.45
81 82 7.257790 TGAGGTGAAGGAGAAAGAAATCATA 57.742 36.000 0.00 0.00 0.00 2.15
82 83 7.689299 TGAGGTGAAGGAGAAAGAAATCATAA 58.311 34.615 0.00 0.00 0.00 1.90
83 84 7.826252 TGAGGTGAAGGAGAAAGAAATCATAAG 59.174 37.037 0.00 0.00 0.00 1.73
84 85 7.922382 AGGTGAAGGAGAAAGAAATCATAAGA 58.078 34.615 0.00 0.00 0.00 2.10
85 86 8.386264 AGGTGAAGGAGAAAGAAATCATAAGAA 58.614 33.333 0.00 0.00 0.00 2.52
86 87 9.014297 GGTGAAGGAGAAAGAAATCATAAGAAA 57.986 33.333 0.00 0.00 0.00 2.52
90 91 9.866798 AAGGAGAAAGAAATCATAAGAAAATGC 57.133 29.630 0.00 0.00 0.00 3.56
91 92 9.252635 AGGAGAAAGAAATCATAAGAAAATGCT 57.747 29.630 0.00 0.00 0.00 3.79
92 93 9.866798 GGAGAAAGAAATCATAAGAAAATGCTT 57.133 29.630 0.00 0.00 0.00 3.91
98 99 9.852091 AGAAATCATAAGAAAATGCTTGTCTTC 57.148 29.630 5.05 0.00 33.70 2.87
99 100 9.852091 GAAATCATAAGAAAATGCTTGTCTTCT 57.148 29.630 5.05 0.00 33.70 2.85
134 135 8.915871 GAGATGATCTCTTAGCTCAATATGTC 57.084 38.462 14.98 0.00 40.30 3.06
135 136 8.654485 AGATGATCTCTTAGCTCAATATGTCT 57.346 34.615 0.00 0.00 0.00 3.41
136 137 8.742777 AGATGATCTCTTAGCTCAATATGTCTC 58.257 37.037 0.00 0.00 0.00 3.36
137 138 7.830099 TGATCTCTTAGCTCAATATGTCTCA 57.170 36.000 0.00 0.00 0.00 3.27
138 139 7.656412 TGATCTCTTAGCTCAATATGTCTCAC 58.344 38.462 0.00 0.00 0.00 3.51
139 140 7.286316 TGATCTCTTAGCTCAATATGTCTCACA 59.714 37.037 0.00 0.00 0.00 3.58
140 141 7.410120 TCTCTTAGCTCAATATGTCTCACAA 57.590 36.000 0.00 0.00 0.00 3.33
141 142 8.016301 TCTCTTAGCTCAATATGTCTCACAAT 57.984 34.615 0.00 0.00 0.00 2.71
142 143 7.924947 TCTCTTAGCTCAATATGTCTCACAATG 59.075 37.037 0.00 0.00 0.00 2.82
143 144 7.559486 TCTTAGCTCAATATGTCTCACAATGT 58.441 34.615 0.00 0.00 0.00 2.71
144 145 8.043113 TCTTAGCTCAATATGTCTCACAATGTT 58.957 33.333 0.00 0.00 0.00 2.71
145 146 8.565896 TTAGCTCAATATGTCTCACAATGTTT 57.434 30.769 0.00 0.00 0.00 2.83
146 147 7.458409 AGCTCAATATGTCTCACAATGTTTT 57.542 32.000 0.00 0.00 0.00 2.43
147 148 8.565896 AGCTCAATATGTCTCACAATGTTTTA 57.434 30.769 0.00 0.00 0.00 1.52
148 149 8.671921 AGCTCAATATGTCTCACAATGTTTTAG 58.328 33.333 0.00 0.00 0.00 1.85
149 150 7.912250 GCTCAATATGTCTCACAATGTTTTAGG 59.088 37.037 0.00 0.00 0.00 2.69
150 151 9.166173 CTCAATATGTCTCACAATGTTTTAGGA 57.834 33.333 0.00 0.00 0.00 2.94
151 152 9.513906 TCAATATGTCTCACAATGTTTTAGGAA 57.486 29.630 0.00 0.00 0.00 3.36
155 156 7.377766 TGTCTCACAATGTTTTAGGAATAGC 57.622 36.000 0.00 0.00 0.00 2.97
156 157 7.168219 TGTCTCACAATGTTTTAGGAATAGCT 58.832 34.615 0.00 0.00 0.00 3.32
157 158 8.318412 TGTCTCACAATGTTTTAGGAATAGCTA 58.682 33.333 0.00 0.00 0.00 3.32
158 159 8.821894 GTCTCACAATGTTTTAGGAATAGCTAG 58.178 37.037 0.00 0.00 0.00 3.42
159 160 8.540388 TCTCACAATGTTTTAGGAATAGCTAGT 58.460 33.333 0.00 0.00 0.00 2.57
160 161 9.167311 CTCACAATGTTTTAGGAATAGCTAGTT 57.833 33.333 0.00 0.00 0.00 2.24
228 229 8.984891 TTTTGTCATCCTAAATTACATGCAAG 57.015 30.769 0.00 0.00 0.00 4.01
229 230 7.936496 TTGTCATCCTAAATTACATGCAAGA 57.064 32.000 0.00 0.00 0.00 3.02
230 231 7.320443 TGTCATCCTAAATTACATGCAAGAC 57.680 36.000 0.00 0.00 0.00 3.01
231 232 7.112122 TGTCATCCTAAATTACATGCAAGACT 58.888 34.615 0.00 0.00 0.00 3.24
232 233 7.611467 TGTCATCCTAAATTACATGCAAGACTT 59.389 33.333 0.00 0.00 0.00 3.01
233 234 9.109393 GTCATCCTAAATTACATGCAAGACTTA 57.891 33.333 0.00 0.00 0.00 2.24
234 235 9.679661 TCATCCTAAATTACATGCAAGACTTAA 57.320 29.630 0.00 0.00 0.00 1.85
237 238 9.733556 TCCTAAATTACATGCAAGACTTAAAGA 57.266 29.630 0.00 0.00 0.00 2.52
245 246 8.807667 ACATGCAAGACTTAAAGAAAAGATTG 57.192 30.769 0.00 0.00 33.64 2.67
246 247 8.416329 ACATGCAAGACTTAAAGAAAAGATTGT 58.584 29.630 0.00 0.00 33.35 2.71
247 248 8.909671 CATGCAAGACTTAAAGAAAAGATTGTC 58.090 33.333 0.00 0.00 33.35 3.18
248 249 8.225603 TGCAAGACTTAAAGAAAAGATTGTCT 57.774 30.769 0.00 0.00 35.40 3.41
249 250 8.686334 TGCAAGACTTAAAGAAAAGATTGTCTT 58.314 29.630 0.00 0.00 42.07 3.01
269 270 8.565896 TGTCTTATCAATCATTATACATGCCC 57.434 34.615 0.00 0.00 0.00 5.36
270 271 8.385491 TGTCTTATCAATCATTATACATGCCCT 58.615 33.333 0.00 0.00 0.00 5.19
271 272 9.890629 GTCTTATCAATCATTATACATGCCCTA 57.109 33.333 0.00 0.00 0.00 3.53
276 277 8.177119 TCAATCATTATACATGCCCTAAAACC 57.823 34.615 0.00 0.00 0.00 3.27
277 278 7.782168 TCAATCATTATACATGCCCTAAAACCA 59.218 33.333 0.00 0.00 0.00 3.67
278 279 8.420222 CAATCATTATACATGCCCTAAAACCAA 58.580 33.333 0.00 0.00 0.00 3.67
279 280 7.962995 TCATTATACATGCCCTAAAACCAAA 57.037 32.000 0.00 0.00 0.00 3.28
280 281 7.777095 TCATTATACATGCCCTAAAACCAAAC 58.223 34.615 0.00 0.00 0.00 2.93
281 282 4.712122 ATACATGCCCTAAAACCAAACG 57.288 40.909 0.00 0.00 0.00 3.60
282 283 1.616374 ACATGCCCTAAAACCAAACGG 59.384 47.619 0.00 0.00 0.00 4.44
283 284 1.889829 CATGCCCTAAAACCAAACGGA 59.110 47.619 0.00 0.00 0.00 4.69
284 285 2.068834 TGCCCTAAAACCAAACGGAA 57.931 45.000 0.00 0.00 0.00 4.30
285 286 2.599677 TGCCCTAAAACCAAACGGAAT 58.400 42.857 0.00 0.00 0.00 3.01
286 287 2.297597 TGCCCTAAAACCAAACGGAATG 59.702 45.455 0.00 0.00 0.00 2.67
287 288 2.559231 GCCCTAAAACCAAACGGAATGA 59.441 45.455 0.00 0.00 0.00 2.57
288 289 3.006003 GCCCTAAAACCAAACGGAATGAA 59.994 43.478 0.00 0.00 0.00 2.57
289 290 4.322424 GCCCTAAAACCAAACGGAATGAAT 60.322 41.667 0.00 0.00 0.00 2.57
290 291 5.789521 CCCTAAAACCAAACGGAATGAATT 58.210 37.500 0.00 0.00 0.00 2.17
291 292 6.572703 GCCCTAAAACCAAACGGAATGAATTA 60.573 38.462 0.00 0.00 0.00 1.40
292 293 7.379750 CCCTAAAACCAAACGGAATGAATTAA 58.620 34.615 0.00 0.00 0.00 1.40
293 294 7.873505 CCCTAAAACCAAACGGAATGAATTAAA 59.126 33.333 0.00 0.00 0.00 1.52
294 295 9.430623 CCTAAAACCAAACGGAATGAATTAAAT 57.569 29.630 0.00 0.00 0.00 1.40
297 298 7.575332 AACCAAACGGAATGAATTAAATTCG 57.425 32.000 7.07 0.00 42.15 3.34
298 299 6.096695 ACCAAACGGAATGAATTAAATTCGG 58.903 36.000 14.45 14.45 42.15 4.30
299 300 6.096695 CCAAACGGAATGAATTAAATTCGGT 58.903 36.000 15.33 15.33 44.61 4.69
300 301 7.094291 ACCAAACGGAATGAATTAAATTCGGTA 60.094 33.333 18.79 0.00 43.00 4.02
301 302 7.755822 CCAAACGGAATGAATTAAATTCGGTAA 59.244 33.333 18.79 0.00 43.00 2.85
302 303 9.130312 CAAACGGAATGAATTAAATTCGGTAAA 57.870 29.630 18.79 0.00 43.00 2.01
303 304 9.863845 AAACGGAATGAATTAAATTCGGTAAAT 57.136 25.926 18.79 10.81 43.00 1.40
305 306 9.940166 ACGGAATGAATTAAATTCGGTAAATAC 57.060 29.630 17.78 0.00 42.40 1.89
306 307 9.938670 CGGAATGAATTAAATTCGGTAAATACA 57.061 29.630 10.46 0.00 42.15 2.29
336 337 4.070581 CAGATTTTTCTGTAGCACCGTG 57.929 45.455 0.00 0.00 33.32 4.94
337 338 3.745975 CAGATTTTTCTGTAGCACCGTGA 59.254 43.478 1.65 0.00 33.32 4.35
338 339 4.213270 CAGATTTTTCTGTAGCACCGTGAA 59.787 41.667 1.65 0.00 33.32 3.18
339 340 4.819630 AGATTTTTCTGTAGCACCGTGAAA 59.180 37.500 1.65 0.00 0.00 2.69
340 341 4.966965 TTTTTCTGTAGCACCGTGAAAA 57.033 36.364 1.65 0.00 35.63 2.29
341 342 4.966965 TTTTCTGTAGCACCGTGAAAAA 57.033 36.364 1.65 0.00 34.86 1.94
342 343 3.955771 TTCTGTAGCACCGTGAAAAAC 57.044 42.857 1.65 0.00 0.00 2.43
343 344 3.188159 TCTGTAGCACCGTGAAAAACT 57.812 42.857 1.65 0.00 0.00 2.66
344 345 2.869801 TCTGTAGCACCGTGAAAAACTG 59.130 45.455 1.65 0.00 0.00 3.16
345 346 2.869801 CTGTAGCACCGTGAAAAACTGA 59.130 45.455 1.65 0.00 0.00 3.41
346 347 3.271729 TGTAGCACCGTGAAAAACTGAA 58.728 40.909 1.65 0.00 0.00 3.02
347 348 3.690139 TGTAGCACCGTGAAAAACTGAAA 59.310 39.130 1.65 0.00 0.00 2.69
348 349 3.859411 AGCACCGTGAAAAACTGAAAA 57.141 38.095 1.65 0.00 0.00 2.29
349 350 4.385358 AGCACCGTGAAAAACTGAAAAT 57.615 36.364 1.65 0.00 0.00 1.82
350 351 4.754322 AGCACCGTGAAAAACTGAAAATT 58.246 34.783 1.65 0.00 0.00 1.82
351 352 5.175127 AGCACCGTGAAAAACTGAAAATTT 58.825 33.333 1.65 0.00 0.00 1.82
352 353 5.063312 AGCACCGTGAAAAACTGAAAATTTG 59.937 36.000 1.65 0.00 0.00 2.32
353 354 5.163903 GCACCGTGAAAAACTGAAAATTTGT 60.164 36.000 1.65 0.00 0.00 2.83
354 355 6.619660 GCACCGTGAAAAACTGAAAATTTGTT 60.620 34.615 1.65 0.00 0.00 2.83
355 356 7.294473 CACCGTGAAAAACTGAAAATTTGTTT 58.706 30.769 0.00 0.00 35.71 2.83
356 357 7.800847 CACCGTGAAAAACTGAAAATTTGTTTT 59.199 29.630 10.47 10.47 43.11 2.43
375 376 3.916359 TTTTTGGGGGTTTTGGTCTTC 57.084 42.857 0.00 0.00 0.00 2.87
376 377 1.404843 TTTGGGGGTTTTGGTCTTCG 58.595 50.000 0.00 0.00 0.00 3.79
377 378 0.468400 TTGGGGGTTTTGGTCTTCGG 60.468 55.000 0.00 0.00 0.00 4.30
378 379 1.152138 GGGGGTTTTGGTCTTCGGT 59.848 57.895 0.00 0.00 0.00 4.69
379 380 0.468585 GGGGGTTTTGGTCTTCGGTT 60.469 55.000 0.00 0.00 0.00 4.44
380 381 1.405872 GGGGTTTTGGTCTTCGGTTT 58.594 50.000 0.00 0.00 0.00 3.27
381 382 2.585330 GGGGTTTTGGTCTTCGGTTTA 58.415 47.619 0.00 0.00 0.00 2.01
382 383 3.159472 GGGGTTTTGGTCTTCGGTTTAT 58.841 45.455 0.00 0.00 0.00 1.40
383 384 3.192001 GGGGTTTTGGTCTTCGGTTTATC 59.808 47.826 0.00 0.00 0.00 1.75
384 385 3.120095 GGGTTTTGGTCTTCGGTTTATCG 60.120 47.826 0.00 0.00 0.00 2.92
385 386 3.747529 GGTTTTGGTCTTCGGTTTATCGA 59.252 43.478 0.00 0.00 37.38 3.59
386 387 4.393990 GGTTTTGGTCTTCGGTTTATCGAT 59.606 41.667 2.16 2.16 39.03 3.59
387 388 5.106436 GGTTTTGGTCTTCGGTTTATCGATT 60.106 40.000 1.71 0.00 39.03 3.34
388 389 6.376177 GTTTTGGTCTTCGGTTTATCGATTT 58.624 36.000 1.71 0.00 39.03 2.17
389 390 6.563222 TTTGGTCTTCGGTTTATCGATTTT 57.437 33.333 1.71 0.00 39.03 1.82
390 391 6.563222 TTGGTCTTCGGTTTATCGATTTTT 57.437 33.333 1.71 0.00 39.03 1.94
391 392 7.670009 TTGGTCTTCGGTTTATCGATTTTTA 57.330 32.000 1.71 0.00 39.03 1.52
392 393 7.852971 TGGTCTTCGGTTTATCGATTTTTAT 57.147 32.000 1.71 0.00 39.03 1.40
393 394 7.690228 TGGTCTTCGGTTTATCGATTTTTATG 58.310 34.615 1.71 0.00 39.03 1.90
394 395 6.631636 GGTCTTCGGTTTATCGATTTTTATGC 59.368 38.462 1.71 0.00 39.03 3.14
395 396 6.631636 GTCTTCGGTTTATCGATTTTTATGCC 59.368 38.462 1.71 0.00 39.03 4.40
396 397 5.427036 TCGGTTTATCGATTTTTATGCCC 57.573 39.130 1.71 0.00 33.92 5.36
397 398 4.882427 TCGGTTTATCGATTTTTATGCCCA 59.118 37.500 1.71 0.00 33.92 5.36
398 399 4.973663 CGGTTTATCGATTTTTATGCCCAC 59.026 41.667 1.71 0.00 0.00 4.61
399 400 5.286438 GGTTTATCGATTTTTATGCCCACC 58.714 41.667 1.71 0.00 0.00 4.61
400 401 5.286438 GTTTATCGATTTTTATGCCCACCC 58.714 41.667 1.71 0.00 0.00 4.61
401 402 1.770294 TCGATTTTTATGCCCACCCC 58.230 50.000 0.00 0.00 0.00 4.95
402 403 1.286553 TCGATTTTTATGCCCACCCCT 59.713 47.619 0.00 0.00 0.00 4.79
403 404 2.510382 TCGATTTTTATGCCCACCCCTA 59.490 45.455 0.00 0.00 0.00 3.53
404 405 2.621526 CGATTTTTATGCCCACCCCTAC 59.378 50.000 0.00 0.00 0.00 3.18
405 406 3.687264 CGATTTTTATGCCCACCCCTACT 60.687 47.826 0.00 0.00 0.00 2.57
406 407 3.375647 TTTTTATGCCCACCCCTACTC 57.624 47.619 0.00 0.00 0.00 2.59
407 408 1.218844 TTTATGCCCACCCCTACTCC 58.781 55.000 0.00 0.00 0.00 3.85
408 409 0.696485 TTATGCCCACCCCTACTCCC 60.696 60.000 0.00 0.00 0.00 4.30
409 410 1.903978 TATGCCCACCCCTACTCCCA 61.904 60.000 0.00 0.00 0.00 4.37
410 411 2.612746 GCCCACCCCTACTCCCAA 60.613 66.667 0.00 0.00 0.00 4.12
411 412 2.235761 GCCCACCCCTACTCCCAAA 61.236 63.158 0.00 0.00 0.00 3.28
412 413 1.795951 GCCCACCCCTACTCCCAAAA 61.796 60.000 0.00 0.00 0.00 2.44
413 414 0.781278 CCCACCCCTACTCCCAAAAA 59.219 55.000 0.00 0.00 0.00 1.94
414 415 1.361197 CCCACCCCTACTCCCAAAAAT 59.639 52.381 0.00 0.00 0.00 1.82
415 416 2.623239 CCCACCCCTACTCCCAAAAATC 60.623 54.545 0.00 0.00 0.00 2.17
416 417 2.365582 CACCCCTACTCCCAAAAATCG 58.634 52.381 0.00 0.00 0.00 3.34
417 418 1.283905 ACCCCTACTCCCAAAAATCGG 59.716 52.381 0.00 0.00 0.00 4.18
418 419 1.389555 CCCTACTCCCAAAAATCGGC 58.610 55.000 0.00 0.00 0.00 5.54
419 420 1.389555 CCTACTCCCAAAAATCGGCC 58.610 55.000 0.00 0.00 0.00 6.13
420 421 1.389555 CTACTCCCAAAAATCGGCCC 58.610 55.000 0.00 0.00 0.00 5.80
421 422 0.699399 TACTCCCAAAAATCGGCCCA 59.301 50.000 0.00 0.00 0.00 5.36
422 423 0.178947 ACTCCCAAAAATCGGCCCAA 60.179 50.000 0.00 0.00 0.00 4.12
423 424 0.972883 CTCCCAAAAATCGGCCCAAA 59.027 50.000 0.00 0.00 0.00 3.28
424 425 1.554617 CTCCCAAAAATCGGCCCAAAT 59.445 47.619 0.00 0.00 0.00 2.32
425 426 1.981495 TCCCAAAAATCGGCCCAAATT 59.019 42.857 0.00 0.00 0.00 1.82
426 427 2.027653 TCCCAAAAATCGGCCCAAATTC 60.028 45.455 0.00 0.00 0.00 2.17
427 428 2.289945 CCCAAAAATCGGCCCAAATTCA 60.290 45.455 0.00 0.00 0.00 2.57
428 429 3.406764 CCAAAAATCGGCCCAAATTCAA 58.593 40.909 0.00 0.00 0.00 2.69
429 430 3.817647 CCAAAAATCGGCCCAAATTCAAA 59.182 39.130 0.00 0.00 0.00 2.69
430 431 4.276926 CCAAAAATCGGCCCAAATTCAAAA 59.723 37.500 0.00 0.00 0.00 2.44
431 432 5.221126 CCAAAAATCGGCCCAAATTCAAAAA 60.221 36.000 0.00 0.00 0.00 1.94
452 453 7.889589 AAAAATCAAGCAACTTACCATTAGC 57.110 32.000 0.00 0.00 0.00 3.09
453 454 6.840780 AAATCAAGCAACTTACCATTAGCT 57.159 33.333 0.00 0.00 0.00 3.32
454 455 7.938140 AAATCAAGCAACTTACCATTAGCTA 57.062 32.000 0.00 0.00 0.00 3.32
455 456 7.938140 AATCAAGCAACTTACCATTAGCTAA 57.062 32.000 8.99 8.99 0.00 3.09
456 457 7.938140 ATCAAGCAACTTACCATTAGCTAAA 57.062 32.000 10.85 0.00 0.00 1.85
457 458 7.141100 TCAAGCAACTTACCATTAGCTAAAC 57.859 36.000 10.85 0.00 0.00 2.01
458 459 6.940298 TCAAGCAACTTACCATTAGCTAAACT 59.060 34.615 10.85 0.00 0.00 2.66
459 460 6.743575 AGCAACTTACCATTAGCTAAACTG 57.256 37.500 10.85 5.17 0.00 3.16
460 461 5.123979 AGCAACTTACCATTAGCTAAACTGC 59.876 40.000 10.85 9.98 0.00 4.40
461 462 5.106317 GCAACTTACCATTAGCTAAACTGCA 60.106 40.000 10.85 0.00 34.99 4.41
462 463 6.546395 CAACTTACCATTAGCTAAACTGCAG 58.454 40.000 13.48 13.48 34.99 4.41
463 464 5.805728 ACTTACCATTAGCTAAACTGCAGT 58.194 37.500 15.25 15.25 34.99 4.40
464 465 6.238648 ACTTACCATTAGCTAAACTGCAGTT 58.761 36.000 26.36 26.36 40.50 3.16
465 466 7.391620 ACTTACCATTAGCTAAACTGCAGTTA 58.608 34.615 31.31 15.80 37.25 2.24
466 467 8.047310 ACTTACCATTAGCTAAACTGCAGTTAT 58.953 33.333 31.31 22.03 37.25 1.89
467 468 8.801882 TTACCATTAGCTAAACTGCAGTTATT 57.198 30.769 31.31 19.59 37.25 1.40
468 469 7.703058 ACCATTAGCTAAACTGCAGTTATTT 57.297 32.000 31.31 18.86 37.25 1.40
469 470 7.762382 ACCATTAGCTAAACTGCAGTTATTTC 58.238 34.615 31.31 19.53 37.25 2.17
470 471 7.611855 ACCATTAGCTAAACTGCAGTTATTTCT 59.388 33.333 31.31 24.39 37.25 2.52
471 472 9.109393 CCATTAGCTAAACTGCAGTTATTTCTA 57.891 33.333 31.31 23.51 37.25 2.10
472 473 9.922305 CATTAGCTAAACTGCAGTTATTTCTAC 57.078 33.333 31.31 16.26 37.25 2.59
473 474 9.892130 ATTAGCTAAACTGCAGTTATTTCTACT 57.108 29.630 31.31 21.41 37.25 2.57
474 475 7.835634 AGCTAAACTGCAGTTATTTCTACTC 57.164 36.000 31.31 12.03 37.25 2.59
475 476 6.819146 AGCTAAACTGCAGTTATTTCTACTCC 59.181 38.462 31.31 11.10 37.25 3.85
476 477 6.037281 GCTAAACTGCAGTTATTTCTACTCCC 59.963 42.308 31.31 5.34 37.25 4.30
477 478 5.499004 AACTGCAGTTATTTCTACTCCCA 57.501 39.130 30.25 0.00 36.32 4.37
478 479 4.833390 ACTGCAGTTATTTCTACTCCCAC 58.167 43.478 15.25 0.00 0.00 4.61
479 480 4.532521 ACTGCAGTTATTTCTACTCCCACT 59.467 41.667 15.25 0.00 0.00 4.00
480 481 5.720041 ACTGCAGTTATTTCTACTCCCACTA 59.280 40.000 15.25 0.00 0.00 2.74
481 482 6.384305 ACTGCAGTTATTTCTACTCCCACTAT 59.616 38.462 15.25 0.00 0.00 2.12
482 483 7.092846 ACTGCAGTTATTTCTACTCCCACTATT 60.093 37.037 15.25 0.00 0.00 1.73
483 484 7.630082 TGCAGTTATTTCTACTCCCACTATTT 58.370 34.615 0.00 0.00 0.00 1.40
484 485 8.764558 TGCAGTTATTTCTACTCCCACTATTTA 58.235 33.333 0.00 0.00 0.00 1.40
485 486 9.262358 GCAGTTATTTCTACTCCCACTATTTAG 57.738 37.037 0.00 0.00 0.00 1.85
578 579 9.506018 TCAGATTCTGTTTGATGATTTTACTGA 57.494 29.630 13.23 0.00 32.61 3.41
608 609 9.284968 AGATATTAAAACCATTAAGCTATGCGT 57.715 29.630 0.00 0.00 0.00 5.24
609 610 9.329913 GATATTAAAACCATTAAGCTATGCGTG 57.670 33.333 0.00 0.00 0.00 5.34
610 611 6.745159 TTAAAACCATTAAGCTATGCGTGA 57.255 33.333 0.00 0.00 0.00 4.35
611 612 5.637006 AAAACCATTAAGCTATGCGTGAA 57.363 34.783 0.00 0.00 0.00 3.18
612 613 4.882671 AACCATTAAGCTATGCGTGAAG 57.117 40.909 0.00 0.00 0.00 3.02
613 614 3.206150 ACCATTAAGCTATGCGTGAAGG 58.794 45.455 0.00 0.00 0.00 3.46
614 615 3.118408 ACCATTAAGCTATGCGTGAAGGA 60.118 43.478 0.00 0.00 0.00 3.36
615 616 4.067896 CCATTAAGCTATGCGTGAAGGAT 58.932 43.478 0.00 0.00 34.41 3.24
616 617 4.083643 CCATTAAGCTATGCGTGAAGGATG 60.084 45.833 0.00 0.00 31.61 3.51
617 618 1.959042 AAGCTATGCGTGAAGGATGG 58.041 50.000 0.00 0.00 32.44 3.51
618 619 1.944778 GCTATGCGTGAAGGATGGC 59.055 57.895 0.00 0.00 46.35 4.40
619 620 3.694364 CTATGCGTGAAGGATGGCT 57.306 52.632 0.00 0.00 31.61 4.75
620 621 1.959042 CTATGCGTGAAGGATGGCTT 58.041 50.000 0.00 0.00 31.61 4.35
621 622 1.600957 CTATGCGTGAAGGATGGCTTG 59.399 52.381 0.00 0.00 31.61 4.01
622 623 1.033746 ATGCGTGAAGGATGGCTTGG 61.034 55.000 0.00 0.00 0.00 3.61
623 624 3.056313 GCGTGAAGGATGGCTTGGC 62.056 63.158 0.00 0.00 0.00 4.52
633 634 3.706373 GGCTTGGCCTCGGTGAGA 61.706 66.667 3.32 0.00 46.69 3.27
634 635 2.125350 GCTTGGCCTCGGTGAGAG 60.125 66.667 3.32 0.00 46.44 3.20
645 646 3.401033 TCGGTGAGAGATCTTTTGCAA 57.599 42.857 0.00 0.00 0.00 4.08
646 647 3.942829 TCGGTGAGAGATCTTTTGCAAT 58.057 40.909 0.00 0.00 0.00 3.56
647 648 4.326826 TCGGTGAGAGATCTTTTGCAATT 58.673 39.130 0.00 0.00 0.00 2.32
648 649 4.761739 TCGGTGAGAGATCTTTTGCAATTT 59.238 37.500 0.00 0.00 0.00 1.82
649 650 5.241506 TCGGTGAGAGATCTTTTGCAATTTT 59.758 36.000 0.00 0.00 0.00 1.82
650 651 5.922544 CGGTGAGAGATCTTTTGCAATTTTT 59.077 36.000 0.00 0.00 0.00 1.94
712 713 6.924913 TTAGATGGAGATGAGAACCTATGG 57.075 41.667 0.00 0.00 0.00 2.74
713 714 4.825445 AGATGGAGATGAGAACCTATGGT 58.175 43.478 0.00 0.00 37.65 3.55
714 715 5.970289 AGATGGAGATGAGAACCTATGGTA 58.030 41.667 0.00 0.00 33.12 3.25
715 716 6.569737 AGATGGAGATGAGAACCTATGGTAT 58.430 40.000 0.00 0.00 33.12 2.73
716 717 7.021873 AGATGGAGATGAGAACCTATGGTATT 58.978 38.462 0.00 0.00 33.12 1.89
717 718 7.515514 AGATGGAGATGAGAACCTATGGTATTT 59.484 37.037 0.00 0.00 33.12 1.40
718 719 7.451731 TGGAGATGAGAACCTATGGTATTTT 57.548 36.000 0.00 0.00 33.12 1.82
719 720 7.872138 TGGAGATGAGAACCTATGGTATTTTT 58.128 34.615 0.00 0.00 33.12 1.94
743 744 8.600449 TTTTAAATGAAGGGTTATGCAAAGTG 57.400 30.769 0.00 0.00 0.00 3.16
744 745 4.806640 AATGAAGGGTTATGCAAAGTGG 57.193 40.909 0.00 0.00 0.00 4.00
745 746 1.892474 TGAAGGGTTATGCAAAGTGGC 59.108 47.619 0.00 0.00 0.00 5.01
752 753 2.203195 TGCAAAGTGGCACTCGCT 60.203 55.556 30.33 12.89 39.25 4.93
753 754 2.253452 GCAAAGTGGCACTCGCTG 59.747 61.111 26.14 21.11 38.60 5.18
754 755 2.949106 CAAAGTGGCACTCGCTGG 59.051 61.111 22.31 0.00 38.60 4.85
755 756 1.893808 CAAAGTGGCACTCGCTGGT 60.894 57.895 22.31 0.07 38.60 4.00
756 757 0.602638 CAAAGTGGCACTCGCTGGTA 60.603 55.000 22.31 0.00 38.60 3.25
757 758 0.320771 AAAGTGGCACTCGCTGGTAG 60.321 55.000 22.31 0.00 38.60 3.18
758 759 2.125512 GTGGCACTCGCTGGTAGG 60.126 66.667 11.13 0.00 38.60 3.18
759 760 4.082523 TGGCACTCGCTGGTAGGC 62.083 66.667 0.00 0.00 38.60 3.93
760 761 3.775654 GGCACTCGCTGGTAGGCT 61.776 66.667 0.00 0.00 38.60 4.58
761 762 2.510238 GCACTCGCTGGTAGGCTG 60.510 66.667 0.00 0.00 34.30 4.85
762 763 2.973899 CACTCGCTGGTAGGCTGT 59.026 61.111 0.00 0.00 0.00 4.40
763 764 1.293498 CACTCGCTGGTAGGCTGTT 59.707 57.895 0.00 0.00 0.00 3.16
764 765 1.016130 CACTCGCTGGTAGGCTGTTG 61.016 60.000 0.00 0.00 0.00 3.33
765 766 1.293498 CTCGCTGGTAGGCTGTTGT 59.707 57.895 0.00 0.00 0.00 3.32
766 767 1.005037 TCGCTGGTAGGCTGTTGTG 60.005 57.895 0.00 0.00 0.00 3.33
767 768 1.005037 CGCTGGTAGGCTGTTGTGA 60.005 57.895 0.00 0.00 0.00 3.58
768 769 0.391661 CGCTGGTAGGCTGTTGTGAT 60.392 55.000 0.00 0.00 0.00 3.06
769 770 1.134818 CGCTGGTAGGCTGTTGTGATA 60.135 52.381 0.00 0.00 0.00 2.15
770 771 2.483714 CGCTGGTAGGCTGTTGTGATAT 60.484 50.000 0.00 0.00 0.00 1.63
771 772 3.545703 GCTGGTAGGCTGTTGTGATATT 58.454 45.455 0.00 0.00 0.00 1.28
772 773 3.947834 GCTGGTAGGCTGTTGTGATATTT 59.052 43.478 0.00 0.00 0.00 1.40
773 774 4.399303 GCTGGTAGGCTGTTGTGATATTTT 59.601 41.667 0.00 0.00 0.00 1.82
774 775 5.105756 GCTGGTAGGCTGTTGTGATATTTTT 60.106 40.000 0.00 0.00 0.00 1.94
832 833 2.746279 TTTTTGGGTGAAGCTGAGGA 57.254 45.000 0.00 0.00 0.00 3.71
833 834 1.981256 TTTTGGGTGAAGCTGAGGAC 58.019 50.000 0.00 0.00 0.00 3.85
834 835 1.140312 TTTGGGTGAAGCTGAGGACT 58.860 50.000 0.00 0.00 0.00 3.85
835 836 0.687354 TTGGGTGAAGCTGAGGACTC 59.313 55.000 0.00 0.00 0.00 3.36
836 837 0.471780 TGGGTGAAGCTGAGGACTCA 60.472 55.000 1.61 1.61 38.06 3.41
837 838 0.687354 GGGTGAAGCTGAGGACTCAA 59.313 55.000 3.35 0.00 39.39 3.02
838 839 1.338579 GGGTGAAGCTGAGGACTCAAG 60.339 57.143 3.35 0.00 39.39 3.02
839 840 1.620819 GGTGAAGCTGAGGACTCAAGA 59.379 52.381 3.35 0.00 39.39 3.02
840 841 2.037772 GGTGAAGCTGAGGACTCAAGAA 59.962 50.000 3.35 0.00 39.39 2.52
841 842 3.063485 GTGAAGCTGAGGACTCAAGAAC 58.937 50.000 3.35 0.00 39.39 3.01
842 843 2.968574 TGAAGCTGAGGACTCAAGAACT 59.031 45.455 3.35 0.00 39.39 3.01
843 844 3.389329 TGAAGCTGAGGACTCAAGAACTT 59.611 43.478 3.35 5.18 39.39 2.66
844 845 4.141620 TGAAGCTGAGGACTCAAGAACTTT 60.142 41.667 3.35 0.00 39.39 2.66
845 846 5.070446 TGAAGCTGAGGACTCAAGAACTTTA 59.930 40.000 3.35 0.44 39.39 1.85
846 847 5.753721 AGCTGAGGACTCAAGAACTTTAT 57.246 39.130 3.35 0.00 39.39 1.40
847 848 5.486526 AGCTGAGGACTCAAGAACTTTATG 58.513 41.667 3.35 0.00 39.39 1.90
848 849 5.012561 AGCTGAGGACTCAAGAACTTTATGT 59.987 40.000 3.35 0.00 39.39 2.29
849 850 6.211584 AGCTGAGGACTCAAGAACTTTATGTA 59.788 38.462 3.35 0.00 39.39 2.29
850 851 7.044798 GCTGAGGACTCAAGAACTTTATGTAT 58.955 38.462 3.35 0.00 39.39 2.29
851 852 7.550906 GCTGAGGACTCAAGAACTTTATGTATT 59.449 37.037 3.35 0.00 39.39 1.89
852 853 9.442047 CTGAGGACTCAAGAACTTTATGTATTT 57.558 33.333 3.35 0.00 39.39 1.40
853 854 9.793259 TGAGGACTCAAGAACTTTATGTATTTT 57.207 29.630 0.00 0.00 36.53 1.82
877 878 6.746104 TTTTCAATGAAAACGTGTGCATAG 57.254 33.333 16.28 0.00 36.73 2.23
878 879 3.820689 TCAATGAAAACGTGTGCATAGC 58.179 40.909 0.00 0.00 0.00 2.97
879 880 3.501828 TCAATGAAAACGTGTGCATAGCT 59.498 39.130 0.00 0.00 0.00 3.32
880 881 4.023279 TCAATGAAAACGTGTGCATAGCTT 60.023 37.500 0.00 0.00 0.00 3.74
881 882 3.536158 TGAAAACGTGTGCATAGCTTC 57.464 42.857 0.00 0.00 0.00 3.86
882 883 2.225491 TGAAAACGTGTGCATAGCTTCC 59.775 45.455 0.00 0.00 0.00 3.46
883 884 2.185004 AAACGTGTGCATAGCTTCCT 57.815 45.000 0.00 0.00 0.00 3.36
884 885 1.726853 AACGTGTGCATAGCTTCCTC 58.273 50.000 0.00 0.00 0.00 3.71
885 886 0.108138 ACGTGTGCATAGCTTCCTCC 60.108 55.000 0.00 0.00 0.00 4.30
886 887 0.811616 CGTGTGCATAGCTTCCTCCC 60.812 60.000 0.00 0.00 0.00 4.30
887 888 0.253044 GTGTGCATAGCTTCCTCCCA 59.747 55.000 0.00 0.00 0.00 4.37
888 889 0.991146 TGTGCATAGCTTCCTCCCAA 59.009 50.000 0.00 0.00 0.00 4.12
889 890 1.065199 TGTGCATAGCTTCCTCCCAAG 60.065 52.381 0.00 0.00 0.00 3.61
895 896 4.394712 CTTCCTCCCAAGCGGCGT 62.395 66.667 9.37 0.00 0.00 5.68
896 897 4.388499 TTCCTCCCAAGCGGCGTC 62.388 66.667 9.37 0.13 0.00 5.19
898 899 4.697756 CCTCCCAAGCGGCGTCAA 62.698 66.667 9.37 0.00 0.00 3.18
899 900 2.668212 CTCCCAAGCGGCGTCAAA 60.668 61.111 9.37 0.00 0.00 2.69
900 901 2.668212 TCCCAAGCGGCGTCAAAG 60.668 61.111 9.37 0.00 0.00 2.77
901 902 3.737172 CCCAAGCGGCGTCAAAGG 61.737 66.667 9.37 3.88 0.00 3.11
902 903 3.737172 CCAAGCGGCGTCAAAGGG 61.737 66.667 9.37 0.00 0.00 3.95
903 904 2.978010 CAAGCGGCGTCAAAGGGT 60.978 61.111 9.37 0.00 0.00 4.34
904 905 2.978010 AAGCGGCGTCAAAGGGTG 60.978 61.111 9.37 0.00 0.00 4.61
911 912 3.056328 GTCAAAGGGTGGCGCCTC 61.056 66.667 29.70 24.78 37.43 4.70
912 913 3.565214 TCAAAGGGTGGCGCCTCA 61.565 61.111 29.70 4.80 37.43 3.86
913 914 2.597217 CAAAGGGTGGCGCCTCAA 60.597 61.111 29.70 3.84 37.43 3.02
914 915 1.978617 CAAAGGGTGGCGCCTCAAT 60.979 57.895 29.70 13.45 37.43 2.57
915 916 1.678970 AAAGGGTGGCGCCTCAATC 60.679 57.895 29.70 16.61 37.43 2.67
916 917 2.424842 AAAGGGTGGCGCCTCAATCA 62.425 55.000 29.70 1.94 37.43 2.57
917 918 3.134127 GGGTGGCGCCTCAATCAC 61.134 66.667 29.70 16.18 37.43 3.06
918 919 2.045926 GGTGGCGCCTCAATCACT 60.046 61.111 29.70 0.00 0.00 3.41
919 920 1.220749 GGTGGCGCCTCAATCACTA 59.779 57.895 29.70 0.00 0.00 2.74
920 921 0.811616 GGTGGCGCCTCAATCACTAG 60.812 60.000 29.70 0.00 0.00 2.57
921 922 0.108138 GTGGCGCCTCAATCACTAGT 60.108 55.000 29.70 0.00 0.00 2.57
922 923 0.175760 TGGCGCCTCAATCACTAGTC 59.824 55.000 29.70 0.00 0.00 2.59
923 924 0.872021 GGCGCCTCAATCACTAGTCG 60.872 60.000 22.15 0.00 0.00 4.18
932 933 3.119955 TCAATCACTAGTCGGACGTTGAG 60.120 47.826 1.89 2.14 0.00 3.02
1041 1046 3.729356 CATACACTGCACGAGAGCT 57.271 52.632 0.00 0.00 34.99 4.09
1042 1047 2.001812 CATACACTGCACGAGAGCTT 57.998 50.000 0.00 0.00 34.99 3.74
1065 1070 0.971959 TGCTCCAACAATCCATGGCC 60.972 55.000 6.96 0.00 36.62 5.36
1066 1071 0.685458 GCTCCAACAATCCATGGCCT 60.685 55.000 6.96 0.00 36.62 5.19
1067 1072 1.396653 CTCCAACAATCCATGGCCTC 58.603 55.000 6.96 0.00 36.62 4.70
1068 1073 0.033208 TCCAACAATCCATGGCCTCC 60.033 55.000 6.96 0.00 36.62 4.30
1069 1074 1.386525 CCAACAATCCATGGCCTCCG 61.387 60.000 6.96 0.00 0.00 4.63
1070 1075 0.394216 CAACAATCCATGGCCTCCGA 60.394 55.000 6.96 0.00 0.00 4.55
2014 2086 3.514362 TGCTCGCGCCGATAGTCA 61.514 61.111 0.00 0.00 34.61 3.41
2129 2222 4.581077 TCTGAATGGATCTCATCTCACG 57.419 45.455 0.00 0.00 34.44 4.35
2130 2223 3.320256 TCTGAATGGATCTCATCTCACGG 59.680 47.826 0.00 0.00 34.44 4.94
2145 2265 5.201713 TCTCACGGAATCTGAATGTATCC 57.798 43.478 0.00 0.00 0.00 2.59
2154 2274 7.012704 CGGAATCTGAATGTATCCAAGTCAATT 59.987 37.037 0.00 0.00 0.00 2.32
2157 2277 9.471702 AATCTGAATGTATCCAAGTCAATTCTT 57.528 29.630 0.00 0.00 0.00 2.52
2158 2278 8.272545 TCTGAATGTATCCAAGTCAATTCTTG 57.727 34.615 0.88 0.88 42.86 3.02
2162 2282 6.558771 TGTATCCAAGTCAATTCTTGTGTG 57.441 37.500 6.24 0.00 42.01 3.82
2163 2283 6.061441 TGTATCCAAGTCAATTCTTGTGTGT 58.939 36.000 6.24 0.00 42.01 3.72
2164 2284 4.898829 TCCAAGTCAATTCTTGTGTGTG 57.101 40.909 6.24 0.00 42.01 3.82
2195 2374 5.509716 TCAAATTCATCCTAGCAATGCAG 57.490 39.130 8.35 2.80 0.00 4.41
2216 2395 6.641169 CAGGATGCAATCTCTGTAGTAGTA 57.359 41.667 0.00 0.00 44.71 1.82
2217 2396 6.442952 CAGGATGCAATCTCTGTAGTAGTAC 58.557 44.000 0.37 0.37 44.71 2.73
2218 2397 6.039829 CAGGATGCAATCTCTGTAGTAGTACA 59.960 42.308 10.01 10.01 44.71 2.90
2219 2398 6.780031 AGGATGCAATCTCTGTAGTAGTACAT 59.220 38.462 10.83 0.00 44.71 2.29
2220 2399 6.865726 GGATGCAATCTCTGTAGTAGTACATG 59.134 42.308 10.83 7.28 44.71 3.21
2221 2400 6.775594 TGCAATCTCTGTAGTAGTACATGT 57.224 37.500 10.83 2.69 38.51 3.21
2222 2401 7.170393 TGCAATCTCTGTAGTAGTACATGTT 57.830 36.000 10.83 2.04 38.51 2.71
2225 2404 8.596380 GCAATCTCTGTAGTAGTACATGTTTTC 58.404 37.037 10.83 0.00 38.51 2.29
2228 2407 9.862371 ATCTCTGTAGTAGTACATGTTTTCTTG 57.138 33.333 10.83 0.00 38.51 3.02
2232 2411 8.185506 TGTAGTAGTACATGTTTTCTTGAGGA 57.814 34.615 2.30 0.00 34.02 3.71
2238 2417 5.712152 ACATGTTTTCTTGAGGATGGAAC 57.288 39.130 0.00 0.00 0.00 3.62
2240 2419 5.242393 ACATGTTTTCTTGAGGATGGAACTG 59.758 40.000 0.00 0.00 0.00 3.16
2243 2422 3.423539 TTCTTGAGGATGGAACTGTGG 57.576 47.619 0.00 0.00 0.00 4.17
2269 2448 3.943381 CAGTTGGAATTGCAGAGCAGATA 59.057 43.478 0.00 0.00 40.61 1.98
2288 2467 6.822676 GCAGATATAAATTCCCCTGAGATGAG 59.177 42.308 0.00 0.00 0.00 2.90
2289 2468 7.310921 GCAGATATAAATTCCCCTGAGATGAGA 60.311 40.741 0.00 0.00 0.00 3.27
2290 2469 8.770322 CAGATATAAATTCCCCTGAGATGAGAT 58.230 37.037 0.00 0.00 0.00 2.75
2291 2470 8.770322 AGATATAAATTCCCCTGAGATGAGATG 58.230 37.037 0.00 0.00 0.00 2.90
2293 2472 5.926580 AAATTCCCCTGAGATGAGATGAT 57.073 39.130 0.00 0.00 0.00 2.45
2294 2473 5.926580 AATTCCCCTGAGATGAGATGATT 57.073 39.130 0.00 0.00 0.00 2.57
2295 2474 7.398289 AAATTCCCCTGAGATGAGATGATTA 57.602 36.000 0.00 0.00 0.00 1.75
2296 2475 7.585884 AATTCCCCTGAGATGAGATGATTAT 57.414 36.000 0.00 0.00 0.00 1.28
2297 2476 6.617782 TTCCCCTGAGATGAGATGATTATC 57.382 41.667 0.00 0.00 0.00 1.75
2298 2477 5.658474 TCCCCTGAGATGAGATGATTATCA 58.342 41.667 0.00 0.00 35.70 2.15
2300 2479 6.013898 TCCCCTGAGATGAGATGATTATCAAC 60.014 42.308 0.00 0.00 35.70 3.18
2303 2482 7.256225 CCCTGAGATGAGATGATTATCAACAGA 60.256 40.741 0.00 0.00 35.70 3.41
2304 2483 8.148999 CCTGAGATGAGATGATTATCAACAGAA 58.851 37.037 0.00 0.00 35.70 3.02
2306 2485 9.322773 TGAGATGAGATGATTATCAACAGAAAC 57.677 33.333 0.00 0.00 35.70 2.78
2308 2487 9.327628 AGATGAGATGATTATCAACAGAAACAG 57.672 33.333 0.00 0.00 35.70 3.16
2310 2489 9.676861 ATGAGATGATTATCAACAGAAACAGAA 57.323 29.630 0.00 0.00 35.70 3.02
2311 2490 9.676861 TGAGATGATTATCAACAGAAACAGAAT 57.323 29.630 0.00 0.00 35.70 2.40
2360 2543 9.736023 AAATGAATAAACAGAACAGAACAGAAC 57.264 29.630 0.00 0.00 0.00 3.01
2361 2544 7.857734 TGAATAAACAGAACAGAACAGAACA 57.142 32.000 0.00 0.00 0.00 3.18
2362 2545 8.450578 TGAATAAACAGAACAGAACAGAACAT 57.549 30.769 0.00 0.00 0.00 2.71
2363 2546 9.554395 TGAATAAACAGAACAGAACAGAACATA 57.446 29.630 0.00 0.00 0.00 2.29
2373 2556 5.104900 ACAGAACAGAACATACATCCCCTAC 60.105 44.000 0.00 0.00 0.00 3.18
2406 2589 3.387374 TGAACTGCAAATGGAACCAACAT 59.613 39.130 0.00 0.00 0.00 2.71
2435 2624 2.076863 GGCAAGTTATTCACAGCGACT 58.923 47.619 0.00 0.00 31.28 4.18
2437 2626 3.307242 GGCAAGTTATTCACAGCGACTAG 59.693 47.826 0.00 0.00 31.28 2.57
2465 2656 0.520619 CGACGACGACGATGACACAT 60.521 55.000 15.32 0.00 42.66 3.21
2482 2679 3.257393 CACATGAACTAGTGGAGCTGAC 58.743 50.000 0.00 0.00 32.24 3.51
2584 2787 7.123098 AGACAGAGATACATCATGATCATCCTC 59.877 40.741 17.53 15.22 0.00 3.71
2617 2820 2.540383 ACTGACTGAGCTAACCATCCA 58.460 47.619 0.00 0.00 0.00 3.41
2623 2826 2.812591 CTGAGCTAACCATCCATGCATC 59.187 50.000 0.00 0.00 0.00 3.91
2624 2827 2.157738 GAGCTAACCATCCATGCATCC 58.842 52.381 0.00 0.00 0.00 3.51
2625 2828 1.496001 AGCTAACCATCCATGCATCCA 59.504 47.619 0.00 0.00 0.00 3.41
2626 2829 2.109480 AGCTAACCATCCATGCATCCAT 59.891 45.455 0.00 0.00 0.00 3.41
2719 2922 1.153249 CTCCTCGTCGCTCTCCTCT 60.153 63.158 0.00 0.00 0.00 3.69
2859 3066 7.492524 TGACAGAGATATGGAATACACAAGTC 58.507 38.462 0.00 0.00 0.00 3.01
2872 3079 3.399330 ACACAAGTCCTGGTACAAATCG 58.601 45.455 0.00 0.00 38.70 3.34
2916 3123 1.918974 GCATTCTTGTCGCGCATCATC 60.919 52.381 8.75 0.00 0.00 2.92
3013 3220 1.531423 ATTCACAAGGTCTGCAGCAG 58.469 50.000 17.10 17.10 0.00 4.24
3039 3246 0.535780 CAGCAGGAGGACAACAGCAA 60.536 55.000 0.00 0.00 0.00 3.91
3058 3270 3.001533 GCAAAAATGTGGTGCTTCAGTTG 59.998 43.478 0.00 0.00 35.36 3.16
3065 3277 3.957497 TGTGGTGCTTCAGTTGGTAAAAT 59.043 39.130 0.00 0.00 0.00 1.82
3175 3429 0.713883 CGGACCTGAACAAATCGACG 59.286 55.000 0.00 0.00 0.00 5.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.524734 CATCATTAGACATGCCCTTACACTA 58.475 40.000 0.00 0.00 0.00 2.74
2 3 5.371526 CATCATTAGACATGCCCTTACACT 58.628 41.667 0.00 0.00 0.00 3.55
3 4 4.023707 GCATCATTAGACATGCCCTTACAC 60.024 45.833 0.00 0.00 39.70 2.90
4 5 4.136796 GCATCATTAGACATGCCCTTACA 58.863 43.478 0.00 0.00 39.70 2.41
5 6 4.392940 AGCATCATTAGACATGCCCTTAC 58.607 43.478 0.00 0.00 45.63 2.34
6 7 4.712051 AGCATCATTAGACATGCCCTTA 57.288 40.909 0.00 0.00 45.63 2.69
7 8 3.589951 AGCATCATTAGACATGCCCTT 57.410 42.857 0.00 0.00 45.63 3.95
9 10 5.972107 AAATAGCATCATTAGACATGCCC 57.028 39.130 0.00 0.00 45.63 5.36
10 11 7.391554 TCCTAAAATAGCATCATTAGACATGCC 59.608 37.037 0.00 0.00 45.63 4.40
11 12 8.327941 TCCTAAAATAGCATCATTAGACATGC 57.672 34.615 0.00 0.00 44.96 4.06
12 13 9.499479 ACTCCTAAAATAGCATCATTAGACATG 57.501 33.333 0.00 0.00 0.00 3.21
13 14 9.499479 CACTCCTAAAATAGCATCATTAGACAT 57.501 33.333 0.00 0.00 0.00 3.06
14 15 8.704668 TCACTCCTAAAATAGCATCATTAGACA 58.295 33.333 0.00 0.00 0.00 3.41
15 16 8.983724 GTCACTCCTAAAATAGCATCATTAGAC 58.016 37.037 0.00 0.00 0.00 2.59
16 17 8.704668 TGTCACTCCTAAAATAGCATCATTAGA 58.295 33.333 0.00 0.00 0.00 2.10
17 18 8.893219 TGTCACTCCTAAAATAGCATCATTAG 57.107 34.615 0.00 0.00 0.00 1.73
18 19 9.276590 CATGTCACTCCTAAAATAGCATCATTA 57.723 33.333 0.00 0.00 0.00 1.90
19 20 7.776969 ACATGTCACTCCTAAAATAGCATCATT 59.223 33.333 0.00 0.00 0.00 2.57
20 21 7.285566 ACATGTCACTCCTAAAATAGCATCAT 58.714 34.615 0.00 0.00 0.00 2.45
21 22 6.653020 ACATGTCACTCCTAAAATAGCATCA 58.347 36.000 0.00 0.00 0.00 3.07
22 23 7.386299 CCTACATGTCACTCCTAAAATAGCATC 59.614 40.741 0.00 0.00 0.00 3.91
23 24 7.071196 TCCTACATGTCACTCCTAAAATAGCAT 59.929 37.037 0.00 0.00 0.00 3.79
24 25 6.382859 TCCTACATGTCACTCCTAAAATAGCA 59.617 38.462 0.00 0.00 0.00 3.49
25 26 6.817184 TCCTACATGTCACTCCTAAAATAGC 58.183 40.000 0.00 0.00 0.00 2.97
29 30 9.613428 CATTTATCCTACATGTCACTCCTAAAA 57.387 33.333 0.00 0.00 0.00 1.52
30 31 8.768397 ACATTTATCCTACATGTCACTCCTAAA 58.232 33.333 0.00 1.54 0.00 1.85
31 32 8.319057 ACATTTATCCTACATGTCACTCCTAA 57.681 34.615 0.00 0.00 0.00 2.69
32 33 7.914427 ACATTTATCCTACATGTCACTCCTA 57.086 36.000 0.00 0.00 0.00 2.94
33 34 6.814954 ACATTTATCCTACATGTCACTCCT 57.185 37.500 0.00 0.00 0.00 3.69
34 35 7.047891 TCAACATTTATCCTACATGTCACTCC 58.952 38.462 0.00 0.00 30.58 3.85
35 36 7.225538 CCTCAACATTTATCCTACATGTCACTC 59.774 40.741 0.00 0.00 30.58 3.51
36 37 7.050377 CCTCAACATTTATCCTACATGTCACT 58.950 38.462 0.00 0.00 30.58 3.41
37 38 6.823689 ACCTCAACATTTATCCTACATGTCAC 59.176 38.462 0.00 0.00 30.58 3.67
38 39 6.823182 CACCTCAACATTTATCCTACATGTCA 59.177 38.462 0.00 0.00 30.58 3.58
39 40 7.047891 TCACCTCAACATTTATCCTACATGTC 58.952 38.462 0.00 0.00 30.58 3.06
40 41 6.957631 TCACCTCAACATTTATCCTACATGT 58.042 36.000 2.69 2.69 32.31 3.21
41 42 7.012704 CCTTCACCTCAACATTTATCCTACATG 59.987 40.741 0.00 0.00 0.00 3.21
42 43 7.056635 CCTTCACCTCAACATTTATCCTACAT 58.943 38.462 0.00 0.00 0.00 2.29
43 44 6.214615 TCCTTCACCTCAACATTTATCCTACA 59.785 38.462 0.00 0.00 0.00 2.74
44 45 6.650120 TCCTTCACCTCAACATTTATCCTAC 58.350 40.000 0.00 0.00 0.00 3.18
45 46 6.672218 TCTCCTTCACCTCAACATTTATCCTA 59.328 38.462 0.00 0.00 0.00 2.94
46 47 5.488919 TCTCCTTCACCTCAACATTTATCCT 59.511 40.000 0.00 0.00 0.00 3.24
47 48 5.745227 TCTCCTTCACCTCAACATTTATCC 58.255 41.667 0.00 0.00 0.00 2.59
48 49 7.607991 TCTTTCTCCTTCACCTCAACATTTATC 59.392 37.037 0.00 0.00 0.00 1.75
49 50 7.461749 TCTTTCTCCTTCACCTCAACATTTAT 58.538 34.615 0.00 0.00 0.00 1.40
50 51 6.837312 TCTTTCTCCTTCACCTCAACATTTA 58.163 36.000 0.00 0.00 0.00 1.40
51 52 5.694995 TCTTTCTCCTTCACCTCAACATTT 58.305 37.500 0.00 0.00 0.00 2.32
52 53 5.310409 TCTTTCTCCTTCACCTCAACATT 57.690 39.130 0.00 0.00 0.00 2.71
53 54 4.982241 TCTTTCTCCTTCACCTCAACAT 57.018 40.909 0.00 0.00 0.00 2.71
54 55 4.771114 TTCTTTCTCCTTCACCTCAACA 57.229 40.909 0.00 0.00 0.00 3.33
55 56 5.765182 TGATTTCTTTCTCCTTCACCTCAAC 59.235 40.000 0.00 0.00 0.00 3.18
56 57 5.940617 TGATTTCTTTCTCCTTCACCTCAA 58.059 37.500 0.00 0.00 0.00 3.02
57 58 5.567037 TGATTTCTTTCTCCTTCACCTCA 57.433 39.130 0.00 0.00 0.00 3.86
58 59 8.043710 TCTTATGATTTCTTTCTCCTTCACCTC 58.956 37.037 0.00 0.00 0.00 3.85
59 60 7.922382 TCTTATGATTTCTTTCTCCTTCACCT 58.078 34.615 0.00 0.00 0.00 4.00
60 61 8.567285 TTCTTATGATTTCTTTCTCCTTCACC 57.433 34.615 0.00 0.00 0.00 4.02
64 65 9.866798 GCATTTTCTTATGATTTCTTTCTCCTT 57.133 29.630 0.00 0.00 0.00 3.36
65 66 9.252635 AGCATTTTCTTATGATTTCTTTCTCCT 57.747 29.630 0.00 0.00 0.00 3.69
66 67 9.866798 AAGCATTTTCTTATGATTTCTTTCTCC 57.133 29.630 0.00 0.00 30.47 3.71
72 73 9.852091 GAAGACAAGCATTTTCTTATGATTTCT 57.148 29.630 0.00 0.00 32.21 2.52
73 74 9.852091 AGAAGACAAGCATTTTCTTATGATTTC 57.148 29.630 0.00 0.00 32.21 2.17
109 110 8.742777 AGACATATTGAGCTAAGAGATCATCTC 58.257 37.037 6.55 6.55 40.66 2.75
110 111 8.654485 AGACATATTGAGCTAAGAGATCATCT 57.346 34.615 0.00 0.00 40.66 2.90
111 112 8.522003 TGAGACATATTGAGCTAAGAGATCATC 58.478 37.037 0.00 0.00 40.66 2.92
112 113 8.306038 GTGAGACATATTGAGCTAAGAGATCAT 58.694 37.037 0.00 0.00 40.66 2.45
113 114 7.286316 TGTGAGACATATTGAGCTAAGAGATCA 59.714 37.037 0.00 0.00 39.09 2.92
114 115 7.656412 TGTGAGACATATTGAGCTAAGAGATC 58.344 38.462 0.00 0.00 0.00 2.75
115 116 7.594351 TGTGAGACATATTGAGCTAAGAGAT 57.406 36.000 0.00 0.00 0.00 2.75
116 117 7.410120 TTGTGAGACATATTGAGCTAAGAGA 57.590 36.000 0.00 0.00 0.00 3.10
117 118 7.710044 ACATTGTGAGACATATTGAGCTAAGAG 59.290 37.037 0.00 0.00 0.00 2.85
118 119 7.559486 ACATTGTGAGACATATTGAGCTAAGA 58.441 34.615 0.00 0.00 0.00 2.10
119 120 7.783090 ACATTGTGAGACATATTGAGCTAAG 57.217 36.000 0.00 0.00 0.00 2.18
120 121 8.565896 AAACATTGTGAGACATATTGAGCTAA 57.434 30.769 0.00 0.00 0.00 3.09
121 122 8.565896 AAAACATTGTGAGACATATTGAGCTA 57.434 30.769 0.00 0.00 0.00 3.32
122 123 7.458409 AAAACATTGTGAGACATATTGAGCT 57.542 32.000 0.00 0.00 0.00 4.09
123 124 7.912250 CCTAAAACATTGTGAGACATATTGAGC 59.088 37.037 0.00 0.00 0.00 4.26
124 125 9.166173 TCCTAAAACATTGTGAGACATATTGAG 57.834 33.333 0.00 0.00 0.00 3.02
125 126 9.513906 TTCCTAAAACATTGTGAGACATATTGA 57.486 29.630 0.00 0.00 0.00 2.57
129 130 9.109393 GCTATTCCTAAAACATTGTGAGACATA 57.891 33.333 0.00 0.00 0.00 2.29
130 131 7.831193 AGCTATTCCTAAAACATTGTGAGACAT 59.169 33.333 0.00 0.00 0.00 3.06
131 132 7.168219 AGCTATTCCTAAAACATTGTGAGACA 58.832 34.615 0.00 0.00 0.00 3.41
132 133 7.617041 AGCTATTCCTAAAACATTGTGAGAC 57.383 36.000 0.00 0.00 0.00 3.36
133 134 8.540388 ACTAGCTATTCCTAAAACATTGTGAGA 58.460 33.333 0.00 0.00 0.00 3.27
134 135 8.723942 ACTAGCTATTCCTAAAACATTGTGAG 57.276 34.615 0.00 0.00 0.00 3.51
202 203 9.421806 CTTGCATGTAATTTAGGATGACAAAAA 57.578 29.630 0.00 0.00 0.00 1.94
203 204 8.801299 TCTTGCATGTAATTTAGGATGACAAAA 58.199 29.630 0.00 0.00 0.00 2.44
204 205 8.243426 GTCTTGCATGTAATTTAGGATGACAAA 58.757 33.333 0.00 0.00 0.00 2.83
205 206 7.611467 AGTCTTGCATGTAATTTAGGATGACAA 59.389 33.333 0.00 0.00 31.86 3.18
206 207 7.112122 AGTCTTGCATGTAATTTAGGATGACA 58.888 34.615 0.00 0.00 31.86 3.58
207 208 7.559590 AGTCTTGCATGTAATTTAGGATGAC 57.440 36.000 0.00 0.00 0.00 3.06
208 209 9.679661 TTAAGTCTTGCATGTAATTTAGGATGA 57.320 29.630 0.00 0.00 0.00 2.92
211 212 9.733556 TCTTTAAGTCTTGCATGTAATTTAGGA 57.266 29.630 0.00 0.00 0.00 2.94
219 220 9.897744 CAATCTTTTCTTTAAGTCTTGCATGTA 57.102 29.630 0.00 0.00 0.00 2.29
220 221 8.416329 ACAATCTTTTCTTTAAGTCTTGCATGT 58.584 29.630 0.00 0.00 0.00 3.21
221 222 8.807667 ACAATCTTTTCTTTAAGTCTTGCATG 57.192 30.769 0.00 0.00 0.00 4.06
222 223 8.854117 AGACAATCTTTTCTTTAAGTCTTGCAT 58.146 29.630 0.00 0.00 31.61 3.96
223 224 8.225603 AGACAATCTTTTCTTTAAGTCTTGCA 57.774 30.769 0.00 0.00 31.61 4.08
243 244 9.013229 GGGCATGTATAATGATTGATAAGACAA 57.987 33.333 0.00 0.00 0.00 3.18
244 245 8.385491 AGGGCATGTATAATGATTGATAAGACA 58.615 33.333 0.00 0.00 0.00 3.41
245 246 8.798859 AGGGCATGTATAATGATTGATAAGAC 57.201 34.615 0.00 0.00 0.00 3.01
250 251 8.806146 GGTTTTAGGGCATGTATAATGATTGAT 58.194 33.333 0.00 0.00 0.00 2.57
251 252 7.782168 TGGTTTTAGGGCATGTATAATGATTGA 59.218 33.333 0.00 0.00 0.00 2.57
252 253 7.950512 TGGTTTTAGGGCATGTATAATGATTG 58.049 34.615 0.00 0.00 0.00 2.67
253 254 8.546083 TTGGTTTTAGGGCATGTATAATGATT 57.454 30.769 0.00 0.00 0.00 2.57
254 255 8.421002 GTTTGGTTTTAGGGCATGTATAATGAT 58.579 33.333 0.00 0.00 0.00 2.45
255 256 7.415765 CGTTTGGTTTTAGGGCATGTATAATGA 60.416 37.037 0.00 0.00 0.00 2.57
256 257 6.695278 CGTTTGGTTTTAGGGCATGTATAATG 59.305 38.462 0.00 0.00 0.00 1.90
257 258 6.183360 CCGTTTGGTTTTAGGGCATGTATAAT 60.183 38.462 0.00 0.00 0.00 1.28
258 259 5.125739 CCGTTTGGTTTTAGGGCATGTATAA 59.874 40.000 0.00 0.00 0.00 0.98
259 260 4.641094 CCGTTTGGTTTTAGGGCATGTATA 59.359 41.667 0.00 0.00 0.00 1.47
260 261 3.445805 CCGTTTGGTTTTAGGGCATGTAT 59.554 43.478 0.00 0.00 0.00 2.29
261 262 2.820787 CCGTTTGGTTTTAGGGCATGTA 59.179 45.455 0.00 0.00 0.00 2.29
262 263 1.616374 CCGTTTGGTTTTAGGGCATGT 59.384 47.619 0.00 0.00 0.00 3.21
263 264 1.889829 TCCGTTTGGTTTTAGGGCATG 59.110 47.619 0.00 0.00 36.30 4.06
264 265 2.296073 TCCGTTTGGTTTTAGGGCAT 57.704 45.000 0.00 0.00 36.30 4.40
265 266 2.068834 TTCCGTTTGGTTTTAGGGCA 57.931 45.000 0.00 0.00 36.30 5.36
266 267 2.559231 TCATTCCGTTTGGTTTTAGGGC 59.441 45.455 0.00 0.00 36.30 5.19
267 268 4.857509 TTCATTCCGTTTGGTTTTAGGG 57.142 40.909 0.00 0.00 36.30 3.53
268 269 8.819643 TTTAATTCATTCCGTTTGGTTTTAGG 57.180 30.769 0.00 0.00 36.30 2.69
271 272 8.491950 CGAATTTAATTCATTCCGTTTGGTTTT 58.508 29.630 16.57 0.00 39.22 2.43
272 273 7.117092 CCGAATTTAATTCATTCCGTTTGGTTT 59.883 33.333 16.57 0.00 39.22 3.27
273 274 6.588373 CCGAATTTAATTCATTCCGTTTGGTT 59.412 34.615 16.57 0.00 39.22 3.67
274 275 6.096695 CCGAATTTAATTCATTCCGTTTGGT 58.903 36.000 16.57 0.00 39.22 3.67
275 276 6.096695 ACCGAATTTAATTCATTCCGTTTGG 58.903 36.000 16.57 9.01 39.22 3.28
276 277 8.676454 TTACCGAATTTAATTCATTCCGTTTG 57.324 30.769 16.57 0.00 39.22 2.93
277 278 9.863845 ATTTACCGAATTTAATTCATTCCGTTT 57.136 25.926 16.57 0.00 39.22 3.60
279 280 9.940166 GTATTTACCGAATTTAATTCATTCCGT 57.060 29.630 16.57 7.30 39.22 4.69
280 281 9.938670 TGTATTTACCGAATTTAATTCATTCCG 57.061 29.630 16.57 4.04 39.22 4.30
315 316 3.745975 TCACGGTGCTACAGAAAAATCTG 59.254 43.478 2.51 4.36 43.03 2.90
316 317 4.002906 TCACGGTGCTACAGAAAAATCT 57.997 40.909 2.51 0.00 0.00 2.40
317 318 4.742438 TTCACGGTGCTACAGAAAAATC 57.258 40.909 2.51 0.00 0.00 2.17
318 319 5.508200 TTTTCACGGTGCTACAGAAAAAT 57.492 34.783 2.51 0.00 35.84 1.82
319 320 4.966965 TTTTCACGGTGCTACAGAAAAA 57.033 36.364 2.51 0.67 35.84 1.94
320 321 4.396790 AGTTTTTCACGGTGCTACAGAAAA 59.603 37.500 2.51 1.39 36.67 2.29
321 322 3.942748 AGTTTTTCACGGTGCTACAGAAA 59.057 39.130 2.51 0.00 0.00 2.52
322 323 3.311322 CAGTTTTTCACGGTGCTACAGAA 59.689 43.478 2.51 0.00 0.00 3.02
323 324 2.869801 CAGTTTTTCACGGTGCTACAGA 59.130 45.455 2.51 0.00 0.00 3.41
324 325 2.869801 TCAGTTTTTCACGGTGCTACAG 59.130 45.455 2.51 0.00 0.00 2.74
325 326 2.907634 TCAGTTTTTCACGGTGCTACA 58.092 42.857 2.51 0.00 0.00 2.74
326 327 3.955771 TTCAGTTTTTCACGGTGCTAC 57.044 42.857 2.51 0.00 0.00 3.58
327 328 4.966965 TTTTCAGTTTTTCACGGTGCTA 57.033 36.364 2.51 0.00 0.00 3.49
328 329 3.859411 TTTTCAGTTTTTCACGGTGCT 57.141 38.095 2.51 0.00 0.00 4.40
329 330 5.163903 ACAAATTTTCAGTTTTTCACGGTGC 60.164 36.000 2.51 0.00 0.00 5.01
330 331 6.401955 ACAAATTTTCAGTTTTTCACGGTG 57.598 33.333 0.56 0.56 0.00 4.94
331 332 7.428282 AAACAAATTTTCAGTTTTTCACGGT 57.572 28.000 0.00 0.00 31.95 4.83
332 333 8.720909 AAAAACAAATTTTCAGTTTTTCACGG 57.279 26.923 17.97 0.00 46.54 4.94
355 356 2.168728 CGAAGACCAAAACCCCCAAAAA 59.831 45.455 0.00 0.00 0.00 1.94
356 357 1.757699 CGAAGACCAAAACCCCCAAAA 59.242 47.619 0.00 0.00 0.00 2.44
357 358 1.404843 CGAAGACCAAAACCCCCAAA 58.595 50.000 0.00 0.00 0.00 3.28
358 359 0.468400 CCGAAGACCAAAACCCCCAA 60.468 55.000 0.00 0.00 0.00 4.12
359 360 1.151908 CCGAAGACCAAAACCCCCA 59.848 57.895 0.00 0.00 0.00 4.96
360 361 0.468585 AACCGAAGACCAAAACCCCC 60.469 55.000 0.00 0.00 0.00 5.40
361 362 1.405872 AAACCGAAGACCAAAACCCC 58.594 50.000 0.00 0.00 0.00 4.95
362 363 3.120095 CGATAAACCGAAGACCAAAACCC 60.120 47.826 0.00 0.00 0.00 4.11
363 364 3.747529 TCGATAAACCGAAGACCAAAACC 59.252 43.478 0.00 0.00 35.42 3.27
364 365 4.996062 TCGATAAACCGAAGACCAAAAC 57.004 40.909 0.00 0.00 35.42 2.43
365 366 6.563222 AAATCGATAAACCGAAGACCAAAA 57.437 33.333 0.00 0.00 42.22 2.44
366 367 6.563222 AAAATCGATAAACCGAAGACCAAA 57.437 33.333 0.00 0.00 42.22 3.28
367 368 6.563222 AAAAATCGATAAACCGAAGACCAA 57.437 33.333 0.00 0.00 42.22 3.67
368 369 7.677747 GCATAAAAATCGATAAACCGAAGACCA 60.678 37.037 0.00 0.00 42.22 4.02
369 370 6.631636 GCATAAAAATCGATAAACCGAAGACC 59.368 38.462 0.00 0.00 42.22 3.85
370 371 6.631636 GGCATAAAAATCGATAAACCGAAGAC 59.368 38.462 0.00 0.00 42.22 3.01
371 372 6.238538 GGGCATAAAAATCGATAAACCGAAGA 60.239 38.462 0.00 0.00 42.22 2.87
372 373 5.912955 GGGCATAAAAATCGATAAACCGAAG 59.087 40.000 0.00 0.00 42.22 3.79
373 374 5.357314 TGGGCATAAAAATCGATAAACCGAA 59.643 36.000 0.00 0.00 42.22 4.30
374 375 4.882427 TGGGCATAAAAATCGATAAACCGA 59.118 37.500 0.00 0.00 43.16 4.69
375 376 4.973663 GTGGGCATAAAAATCGATAAACCG 59.026 41.667 0.00 0.00 0.00 4.44
376 377 5.286438 GGTGGGCATAAAAATCGATAAACC 58.714 41.667 0.00 0.00 0.00 3.27
377 378 5.286438 GGGTGGGCATAAAAATCGATAAAC 58.714 41.667 0.00 0.00 0.00 2.01
378 379 4.342665 GGGGTGGGCATAAAAATCGATAAA 59.657 41.667 0.00 0.00 0.00 1.40
379 380 3.892588 GGGGTGGGCATAAAAATCGATAA 59.107 43.478 0.00 0.00 0.00 1.75
380 381 3.139397 AGGGGTGGGCATAAAAATCGATA 59.861 43.478 0.00 0.00 0.00 2.92
381 382 2.091333 AGGGGTGGGCATAAAAATCGAT 60.091 45.455 0.00 0.00 0.00 3.59
382 383 1.286553 AGGGGTGGGCATAAAAATCGA 59.713 47.619 0.00 0.00 0.00 3.59
383 384 1.775385 AGGGGTGGGCATAAAAATCG 58.225 50.000 0.00 0.00 0.00 3.34
384 385 3.889538 GAGTAGGGGTGGGCATAAAAATC 59.110 47.826 0.00 0.00 0.00 2.17
385 386 3.373767 GGAGTAGGGGTGGGCATAAAAAT 60.374 47.826 0.00 0.00 0.00 1.82
386 387 2.024751 GGAGTAGGGGTGGGCATAAAAA 60.025 50.000 0.00 0.00 0.00 1.94
387 388 1.567175 GGAGTAGGGGTGGGCATAAAA 59.433 52.381 0.00 0.00 0.00 1.52
388 389 1.218844 GGAGTAGGGGTGGGCATAAA 58.781 55.000 0.00 0.00 0.00 1.40
389 390 0.696485 GGGAGTAGGGGTGGGCATAA 60.696 60.000 0.00 0.00 0.00 1.90
390 391 1.074014 GGGAGTAGGGGTGGGCATA 60.074 63.158 0.00 0.00 0.00 3.14
391 392 2.368329 GGGAGTAGGGGTGGGCAT 60.368 66.667 0.00 0.00 0.00 4.40
392 393 3.508786 TTGGGAGTAGGGGTGGGCA 62.509 63.158 0.00 0.00 0.00 5.36
393 394 1.795951 TTTTGGGAGTAGGGGTGGGC 61.796 60.000 0.00 0.00 0.00 5.36
394 395 0.781278 TTTTTGGGAGTAGGGGTGGG 59.219 55.000 0.00 0.00 0.00 4.61
395 396 2.735151 GATTTTTGGGAGTAGGGGTGG 58.265 52.381 0.00 0.00 0.00 4.61
396 397 2.365582 CGATTTTTGGGAGTAGGGGTG 58.634 52.381 0.00 0.00 0.00 4.61
397 398 1.283905 CCGATTTTTGGGAGTAGGGGT 59.716 52.381 0.00 0.00 0.00 4.95
398 399 2.022238 GCCGATTTTTGGGAGTAGGGG 61.022 57.143 0.00 0.00 0.00 4.79
399 400 1.389555 GCCGATTTTTGGGAGTAGGG 58.610 55.000 0.00 0.00 0.00 3.53
400 401 1.389555 GGCCGATTTTTGGGAGTAGG 58.610 55.000 0.00 0.00 0.00 3.18
401 402 1.340600 TGGGCCGATTTTTGGGAGTAG 60.341 52.381 0.00 0.00 0.00 2.57
402 403 0.699399 TGGGCCGATTTTTGGGAGTA 59.301 50.000 0.00 0.00 0.00 2.59
403 404 0.178947 TTGGGCCGATTTTTGGGAGT 60.179 50.000 0.00 0.00 0.00 3.85
404 405 0.972883 TTTGGGCCGATTTTTGGGAG 59.027 50.000 0.00 0.00 0.00 4.30
405 406 1.650528 ATTTGGGCCGATTTTTGGGA 58.349 45.000 0.00 0.00 0.00 4.37
406 407 2.289945 TGAATTTGGGCCGATTTTTGGG 60.290 45.455 0.00 0.00 0.00 4.12
407 408 3.051081 TGAATTTGGGCCGATTTTTGG 57.949 42.857 0.00 0.00 0.00 3.28
408 409 5.429957 TTTTGAATTTGGGCCGATTTTTG 57.570 34.783 0.00 0.00 0.00 2.44
428 429 7.670364 AGCTAATGGTAAGTTGCTTGATTTTT 58.330 30.769 0.00 0.00 0.00 1.94
429 430 7.232118 AGCTAATGGTAAGTTGCTTGATTTT 57.768 32.000 0.00 0.00 0.00 1.82
430 431 6.840780 AGCTAATGGTAAGTTGCTTGATTT 57.159 33.333 0.00 0.00 0.00 2.17
431 432 7.938140 TTAGCTAATGGTAAGTTGCTTGATT 57.062 32.000 0.86 0.00 33.00 2.57
432 433 7.611855 AGTTTAGCTAATGGTAAGTTGCTTGAT 59.388 33.333 7.08 0.00 37.44 2.57
433 434 6.940298 AGTTTAGCTAATGGTAAGTTGCTTGA 59.060 34.615 7.08 0.00 37.44 3.02
434 435 7.023575 CAGTTTAGCTAATGGTAAGTTGCTTG 58.976 38.462 7.08 0.00 37.44 4.01
435 436 6.349363 GCAGTTTAGCTAATGGTAAGTTGCTT 60.349 38.462 7.08 0.00 40.27 3.91
436 437 5.123979 GCAGTTTAGCTAATGGTAAGTTGCT 59.876 40.000 7.08 0.00 40.27 3.91
437 438 5.106317 TGCAGTTTAGCTAATGGTAAGTTGC 60.106 40.000 7.08 8.92 41.77 4.17
438 439 6.149474 ACTGCAGTTTAGCTAATGGTAAGTTG 59.851 38.462 15.25 0.00 37.44 3.16
439 440 6.238648 ACTGCAGTTTAGCTAATGGTAAGTT 58.761 36.000 15.25 0.00 37.44 2.66
440 441 5.805728 ACTGCAGTTTAGCTAATGGTAAGT 58.194 37.500 15.25 6.43 37.44 2.24
441 442 6.743575 AACTGCAGTTTAGCTAATGGTAAG 57.256 37.500 26.36 5.83 37.44 2.34
442 443 8.801882 AATAACTGCAGTTTAGCTAATGGTAA 57.198 30.769 35.20 14.29 39.31 2.85
443 444 8.801882 AAATAACTGCAGTTTAGCTAATGGTA 57.198 30.769 35.20 14.49 39.31 3.25
444 445 7.611855 AGAAATAACTGCAGTTTAGCTAATGGT 59.388 33.333 35.20 14.05 39.31 3.55
445 446 7.989826 AGAAATAACTGCAGTTTAGCTAATGG 58.010 34.615 35.20 0.00 39.31 3.16
446 447 9.922305 GTAGAAATAACTGCAGTTTAGCTAATG 57.078 33.333 35.20 4.84 39.31 1.90
447 448 9.892130 AGTAGAAATAACTGCAGTTTAGCTAAT 57.108 29.630 35.20 24.41 39.31 1.73
448 449 9.367444 GAGTAGAAATAACTGCAGTTTAGCTAA 57.633 33.333 35.20 17.99 39.31 3.09
449 450 7.980099 GGAGTAGAAATAACTGCAGTTTAGCTA 59.020 37.037 35.20 25.24 39.31 3.32
450 451 6.819146 GGAGTAGAAATAACTGCAGTTTAGCT 59.181 38.462 35.20 26.12 39.31 3.32
451 452 6.037281 GGGAGTAGAAATAACTGCAGTTTAGC 59.963 42.308 35.20 21.47 37.06 3.09
452 453 7.064728 GTGGGAGTAGAAATAACTGCAGTTTAG 59.935 40.741 35.20 2.33 37.06 1.85
453 454 6.877322 GTGGGAGTAGAAATAACTGCAGTTTA 59.123 38.462 35.20 19.14 37.06 2.01
454 455 5.705905 GTGGGAGTAGAAATAACTGCAGTTT 59.294 40.000 35.20 19.31 37.06 2.66
455 456 5.013183 AGTGGGAGTAGAAATAACTGCAGTT 59.987 40.000 32.97 32.97 37.06 3.16
456 457 4.532521 AGTGGGAGTAGAAATAACTGCAGT 59.467 41.667 15.25 15.25 37.06 4.40
457 458 5.091261 AGTGGGAGTAGAAATAACTGCAG 57.909 43.478 13.48 13.48 37.06 4.41
458 459 6.808321 ATAGTGGGAGTAGAAATAACTGCA 57.192 37.500 0.00 0.00 37.06 4.41
459 460 9.262358 CTAAATAGTGGGAGTAGAAATAACTGC 57.738 37.037 0.00 0.00 34.82 4.40
552 553 9.506018 TCAGTAAAATCATCAAACAGAATCTGA 57.494 29.630 18.20 0.00 35.18 3.27
582 583 9.284968 ACGCATAGCTTAATGGTTTTAATATCT 57.715 29.630 0.00 0.00 0.00 1.98
583 584 9.329913 CACGCATAGCTTAATGGTTTTAATATC 57.670 33.333 0.00 0.00 0.00 1.63
584 585 9.062524 TCACGCATAGCTTAATGGTTTTAATAT 57.937 29.630 0.00 0.00 0.00 1.28
585 586 8.439993 TCACGCATAGCTTAATGGTTTTAATA 57.560 30.769 0.00 0.00 0.00 0.98
586 587 7.328277 TCACGCATAGCTTAATGGTTTTAAT 57.672 32.000 0.00 0.00 0.00 1.40
587 588 6.745159 TCACGCATAGCTTAATGGTTTTAA 57.255 33.333 0.00 0.00 0.00 1.52
588 589 6.183360 CCTTCACGCATAGCTTAATGGTTTTA 60.183 38.462 0.00 0.00 0.00 1.52
589 590 5.393027 CCTTCACGCATAGCTTAATGGTTTT 60.393 40.000 0.00 0.00 0.00 2.43
590 591 4.096382 CCTTCACGCATAGCTTAATGGTTT 59.904 41.667 0.00 0.00 0.00 3.27
591 592 3.627577 CCTTCACGCATAGCTTAATGGTT 59.372 43.478 0.00 0.00 0.00 3.67
592 593 3.118408 TCCTTCACGCATAGCTTAATGGT 60.118 43.478 0.00 0.00 0.00 3.55
593 594 3.466836 TCCTTCACGCATAGCTTAATGG 58.533 45.455 0.00 0.00 0.00 3.16
594 595 4.083643 CCATCCTTCACGCATAGCTTAATG 60.084 45.833 0.00 0.00 0.00 1.90
595 596 4.067896 CCATCCTTCACGCATAGCTTAAT 58.932 43.478 0.00 0.00 0.00 1.40
596 597 3.466836 CCATCCTTCACGCATAGCTTAA 58.533 45.455 0.00 0.00 0.00 1.85
597 598 2.806745 GCCATCCTTCACGCATAGCTTA 60.807 50.000 0.00 0.00 0.00 3.09
598 599 1.959042 CCATCCTTCACGCATAGCTT 58.041 50.000 0.00 0.00 0.00 3.74
599 600 0.533755 GCCATCCTTCACGCATAGCT 60.534 55.000 0.00 0.00 0.00 3.32
600 601 0.533755 AGCCATCCTTCACGCATAGC 60.534 55.000 0.00 0.00 0.00 2.97
601 602 1.600957 CAAGCCATCCTTCACGCATAG 59.399 52.381 0.00 0.00 0.00 2.23
602 603 1.667236 CAAGCCATCCTTCACGCATA 58.333 50.000 0.00 0.00 0.00 3.14
603 604 1.033746 CCAAGCCATCCTTCACGCAT 61.034 55.000 0.00 0.00 0.00 4.73
604 605 1.675310 CCAAGCCATCCTTCACGCA 60.675 57.895 0.00 0.00 0.00 5.24
605 606 3.056313 GCCAAGCCATCCTTCACGC 62.056 63.158 0.00 0.00 0.00 5.34
606 607 3.190878 GCCAAGCCATCCTTCACG 58.809 61.111 0.00 0.00 0.00 4.35
617 618 1.965754 ATCTCTCACCGAGGCCAAGC 61.966 60.000 5.01 0.00 40.30 4.01
618 619 0.103937 GATCTCTCACCGAGGCCAAG 59.896 60.000 5.01 0.00 40.30 3.61
619 620 0.324738 AGATCTCTCACCGAGGCCAA 60.325 55.000 5.01 0.00 40.30 4.52
620 621 0.324738 AAGATCTCTCACCGAGGCCA 60.325 55.000 5.01 0.00 40.30 5.36
621 622 0.827368 AAAGATCTCTCACCGAGGCC 59.173 55.000 0.00 0.00 40.30 5.19
622 623 2.275318 CAAAAGATCTCTCACCGAGGC 58.725 52.381 0.00 0.00 40.30 4.70
623 624 2.275318 GCAAAAGATCTCTCACCGAGG 58.725 52.381 0.00 0.00 40.30 4.63
624 625 2.964740 TGCAAAAGATCTCTCACCGAG 58.035 47.619 0.00 0.00 41.30 4.63
625 626 3.401033 TTGCAAAAGATCTCTCACCGA 57.599 42.857 0.00 0.00 0.00 4.69
626 627 4.691860 AATTGCAAAAGATCTCTCACCG 57.308 40.909 1.71 0.00 0.00 4.94
686 687 8.213679 CCATAGGTTCTCATCTCCATCTAAAAA 58.786 37.037 0.00 0.00 0.00 1.94
687 688 7.348274 ACCATAGGTTCTCATCTCCATCTAAAA 59.652 37.037 0.00 0.00 27.29 1.52
688 689 6.846505 ACCATAGGTTCTCATCTCCATCTAAA 59.153 38.462 0.00 0.00 27.29 1.85
689 690 6.385443 ACCATAGGTTCTCATCTCCATCTAA 58.615 40.000 0.00 0.00 27.29 2.10
690 691 5.970289 ACCATAGGTTCTCATCTCCATCTA 58.030 41.667 0.00 0.00 27.29 1.98
691 692 4.825445 ACCATAGGTTCTCATCTCCATCT 58.175 43.478 0.00 0.00 27.29 2.90
692 693 6.865834 ATACCATAGGTTCTCATCTCCATC 57.134 41.667 0.00 0.00 37.09 3.51
693 694 7.639062 AAATACCATAGGTTCTCATCTCCAT 57.361 36.000 0.00 0.00 37.09 3.41
694 695 7.451731 AAAATACCATAGGTTCTCATCTCCA 57.548 36.000 0.00 0.00 37.09 3.86
717 718 9.050601 CACTTTGCATAACCCTTCATTTAAAAA 57.949 29.630 0.00 0.00 0.00 1.94
718 719 7.659390 CCACTTTGCATAACCCTTCATTTAAAA 59.341 33.333 0.00 0.00 0.00 1.52
719 720 7.158021 CCACTTTGCATAACCCTTCATTTAAA 58.842 34.615 0.00 0.00 0.00 1.52
720 721 6.696411 CCACTTTGCATAACCCTTCATTTAA 58.304 36.000 0.00 0.00 0.00 1.52
721 722 5.337169 GCCACTTTGCATAACCCTTCATTTA 60.337 40.000 0.00 0.00 0.00 1.40
722 723 4.563374 GCCACTTTGCATAACCCTTCATTT 60.563 41.667 0.00 0.00 0.00 2.32
723 724 3.055891 GCCACTTTGCATAACCCTTCATT 60.056 43.478 0.00 0.00 0.00 2.57
724 725 2.497273 GCCACTTTGCATAACCCTTCAT 59.503 45.455 0.00 0.00 0.00 2.57
725 726 1.892474 GCCACTTTGCATAACCCTTCA 59.108 47.619 0.00 0.00 0.00 3.02
726 727 1.892474 TGCCACTTTGCATAACCCTTC 59.108 47.619 0.00 0.00 36.04 3.46
727 728 1.618343 GTGCCACTTTGCATAACCCTT 59.382 47.619 0.00 0.00 44.30 3.95
728 729 1.203050 AGTGCCACTTTGCATAACCCT 60.203 47.619 0.00 0.00 44.30 4.34
729 730 1.202348 GAGTGCCACTTTGCATAACCC 59.798 52.381 0.00 0.00 44.30 4.11
730 731 1.135689 CGAGTGCCACTTTGCATAACC 60.136 52.381 0.00 0.00 44.30 2.85
731 732 1.729149 GCGAGTGCCACTTTGCATAAC 60.729 52.381 15.52 0.00 44.30 1.89
732 733 0.521291 GCGAGTGCCACTTTGCATAA 59.479 50.000 15.52 0.00 44.30 1.90
733 734 0.321564 AGCGAGTGCCACTTTGCATA 60.322 50.000 20.52 0.00 44.30 3.14
734 735 1.601759 AGCGAGTGCCACTTTGCAT 60.602 52.632 20.52 7.23 44.30 3.96
735 736 2.203195 AGCGAGTGCCACTTTGCA 60.203 55.556 20.52 0.41 44.31 4.08
736 737 2.253452 CAGCGAGTGCCACTTTGC 59.747 61.111 13.31 13.31 44.31 3.68
737 738 0.602638 TACCAGCGAGTGCCACTTTG 60.603 55.000 0.00 0.00 44.31 2.77
738 739 0.320771 CTACCAGCGAGTGCCACTTT 60.321 55.000 0.00 0.00 44.31 2.66
739 740 1.293498 CTACCAGCGAGTGCCACTT 59.707 57.895 0.00 0.00 44.31 3.16
740 741 2.650116 CCTACCAGCGAGTGCCACT 61.650 63.158 0.00 0.00 44.31 4.00
741 742 2.125512 CCTACCAGCGAGTGCCAC 60.126 66.667 0.00 0.00 44.31 5.01
742 743 4.082523 GCCTACCAGCGAGTGCCA 62.083 66.667 0.00 0.00 44.31 4.92
743 744 3.775654 AGCCTACCAGCGAGTGCC 61.776 66.667 0.00 0.00 44.31 5.01
744 745 2.510238 CAGCCTACCAGCGAGTGC 60.510 66.667 0.00 0.00 43.24 4.40
745 746 1.016130 CAACAGCCTACCAGCGAGTG 61.016 60.000 0.00 0.00 38.01 3.51
746 747 1.293498 CAACAGCCTACCAGCGAGT 59.707 57.895 0.00 0.00 38.01 4.18
747 748 1.016130 CACAACAGCCTACCAGCGAG 61.016 60.000 0.00 0.00 38.01 5.03
748 749 1.005037 CACAACAGCCTACCAGCGA 60.005 57.895 0.00 0.00 38.01 4.93
749 750 0.391661 ATCACAACAGCCTACCAGCG 60.392 55.000 0.00 0.00 38.01 5.18
750 751 2.691409 TATCACAACAGCCTACCAGC 57.309 50.000 0.00 0.00 0.00 4.85
751 752 6.515272 AAAAATATCACAACAGCCTACCAG 57.485 37.500 0.00 0.00 0.00 4.00
813 814 2.091885 AGTCCTCAGCTTCACCCAAAAA 60.092 45.455 0.00 0.00 0.00 1.94
814 815 1.494721 AGTCCTCAGCTTCACCCAAAA 59.505 47.619 0.00 0.00 0.00 2.44
815 816 1.072331 GAGTCCTCAGCTTCACCCAAA 59.928 52.381 0.00 0.00 0.00 3.28
816 817 0.687354 GAGTCCTCAGCTTCACCCAA 59.313 55.000 0.00 0.00 0.00 4.12
817 818 0.471780 TGAGTCCTCAGCTTCACCCA 60.472 55.000 0.00 0.00 34.14 4.51
818 819 0.687354 TTGAGTCCTCAGCTTCACCC 59.313 55.000 0.00 0.00 41.13 4.61
819 820 1.620819 TCTTGAGTCCTCAGCTTCACC 59.379 52.381 0.00 0.00 41.13 4.02
820 821 3.063485 GTTCTTGAGTCCTCAGCTTCAC 58.937 50.000 0.00 0.00 41.13 3.18
821 822 2.968574 AGTTCTTGAGTCCTCAGCTTCA 59.031 45.455 0.00 0.00 41.13 3.02
822 823 3.676291 AGTTCTTGAGTCCTCAGCTTC 57.324 47.619 0.00 0.00 41.13 3.86
823 824 4.429854 AAAGTTCTTGAGTCCTCAGCTT 57.570 40.909 0.00 0.00 41.13 3.74
824 825 5.012561 ACATAAAGTTCTTGAGTCCTCAGCT 59.987 40.000 0.00 0.00 41.13 4.24
825 826 5.241662 ACATAAAGTTCTTGAGTCCTCAGC 58.758 41.667 0.00 0.00 41.13 4.26
826 827 9.442047 AAATACATAAAGTTCTTGAGTCCTCAG 57.558 33.333 0.00 0.00 41.13 3.35
827 828 9.793259 AAAATACATAAAGTTCTTGAGTCCTCA 57.207 29.630 0.00 0.00 37.91 3.86
853 854 6.292061 GCTATGCACACGTTTTCATTGAAAAA 60.292 34.615 22.57 8.86 42.09 1.94
854 855 5.174761 GCTATGCACACGTTTTCATTGAAAA 59.825 36.000 18.29 18.29 38.90 2.29
855 856 4.679197 GCTATGCACACGTTTTCATTGAAA 59.321 37.500 7.74 7.74 0.00 2.69
856 857 4.023279 AGCTATGCACACGTTTTCATTGAA 60.023 37.500 0.00 0.00 0.00 2.69
857 858 3.501828 AGCTATGCACACGTTTTCATTGA 59.498 39.130 0.00 0.00 0.00 2.57
858 859 3.825308 AGCTATGCACACGTTTTCATTG 58.175 40.909 0.00 0.00 0.00 2.82
859 860 4.475944 GAAGCTATGCACACGTTTTCATT 58.524 39.130 0.00 0.00 0.00 2.57
860 861 3.119849 GGAAGCTATGCACACGTTTTCAT 60.120 43.478 0.00 0.00 0.00 2.57
861 862 2.225491 GGAAGCTATGCACACGTTTTCA 59.775 45.455 0.00 0.00 0.00 2.69
862 863 2.484264 AGGAAGCTATGCACACGTTTTC 59.516 45.455 0.00 0.00 0.00 2.29
863 864 2.484264 GAGGAAGCTATGCACACGTTTT 59.516 45.455 0.00 0.00 0.00 2.43
864 865 2.076863 GAGGAAGCTATGCACACGTTT 58.923 47.619 0.00 0.00 0.00 3.60
865 866 1.676014 GGAGGAAGCTATGCACACGTT 60.676 52.381 0.00 0.00 0.00 3.99
866 867 0.108138 GGAGGAAGCTATGCACACGT 60.108 55.000 0.00 0.00 0.00 4.49
867 868 0.811616 GGGAGGAAGCTATGCACACG 60.812 60.000 0.00 0.00 0.00 4.49
868 869 0.253044 TGGGAGGAAGCTATGCACAC 59.747 55.000 0.00 0.00 0.00 3.82
869 870 0.991146 TTGGGAGGAAGCTATGCACA 59.009 50.000 0.00 0.00 0.00 4.57
870 871 1.673168 CTTGGGAGGAAGCTATGCAC 58.327 55.000 0.00 0.00 0.00 4.57
871 872 0.107017 GCTTGGGAGGAAGCTATGCA 60.107 55.000 0.00 0.00 44.26 3.96
872 873 1.162800 CGCTTGGGAGGAAGCTATGC 61.163 60.000 0.00 0.00 45.26 3.14
873 874 0.533755 CCGCTTGGGAGGAAGCTATG 60.534 60.000 0.00 0.00 45.26 2.23
874 875 1.832912 CCGCTTGGGAGGAAGCTAT 59.167 57.895 0.00 0.00 45.26 2.97
875 876 3.031417 GCCGCTTGGGAGGAAGCTA 62.031 63.158 0.00 0.00 45.26 3.32
876 877 4.416738 GCCGCTTGGGAGGAAGCT 62.417 66.667 0.00 0.00 45.26 3.74
878 879 4.394712 ACGCCGCTTGGGAGGAAG 62.395 66.667 0.00 0.00 40.42 3.46
879 880 4.388499 GACGCCGCTTGGGAGGAA 62.388 66.667 0.00 0.00 40.42 3.36
881 882 4.697756 TTGACGCCGCTTGGGAGG 62.698 66.667 0.00 0.00 40.42 4.30
882 883 2.668212 TTTGACGCCGCTTGGGAG 60.668 61.111 0.00 0.00 42.10 4.30
883 884 2.668212 CTTTGACGCCGCTTGGGA 60.668 61.111 0.00 0.00 38.47 4.37
884 885 3.737172 CCTTTGACGCCGCTTGGG 61.737 66.667 0.00 0.00 39.58 4.12
885 886 3.737172 CCCTTTGACGCCGCTTGG 61.737 66.667 0.00 0.00 0.00 3.61
886 887 2.978010 ACCCTTTGACGCCGCTTG 60.978 61.111 0.00 0.00 0.00 4.01
887 888 2.978010 CACCCTTTGACGCCGCTT 60.978 61.111 0.00 0.00 0.00 4.68
894 895 3.056328 GAGGCGCCACCCTTTGAC 61.056 66.667 31.54 4.12 40.58 3.18
895 896 2.424842 ATTGAGGCGCCACCCTTTGA 62.425 55.000 31.54 1.44 40.58 2.69
896 897 1.937546 GATTGAGGCGCCACCCTTTG 61.938 60.000 31.54 0.00 40.58 2.77
897 898 1.678970 GATTGAGGCGCCACCCTTT 60.679 57.895 31.54 6.18 40.58 3.11
898 899 2.044946 GATTGAGGCGCCACCCTT 60.045 61.111 31.54 7.13 40.58 3.95
899 900 3.329889 TGATTGAGGCGCCACCCT 61.330 61.111 31.54 12.41 40.58 4.34
900 901 2.252072 TAGTGATTGAGGCGCCACCC 62.252 60.000 31.54 17.69 40.58 4.61
901 902 0.811616 CTAGTGATTGAGGCGCCACC 60.812 60.000 31.54 20.46 39.61 4.61
902 903 0.108138 ACTAGTGATTGAGGCGCCAC 60.108 55.000 31.54 24.60 0.00 5.01
903 904 0.175760 GACTAGTGATTGAGGCGCCA 59.824 55.000 31.54 8.70 0.00 5.69
904 905 0.872021 CGACTAGTGATTGAGGCGCC 60.872 60.000 21.89 21.89 37.40 6.53
905 906 0.872021 CCGACTAGTGATTGAGGCGC 60.872 60.000 0.00 0.00 43.09 6.53
906 907 0.738975 TCCGACTAGTGATTGAGGCG 59.261 55.000 0.00 0.00 44.08 5.52
907 908 1.534175 CGTCCGACTAGTGATTGAGGC 60.534 57.143 0.00 0.00 0.00 4.70
908 909 1.743958 ACGTCCGACTAGTGATTGAGG 59.256 52.381 0.00 0.00 0.00 3.86
909 910 3.119955 TCAACGTCCGACTAGTGATTGAG 60.120 47.826 0.00 0.00 0.00 3.02
910 911 2.815503 TCAACGTCCGACTAGTGATTGA 59.184 45.455 0.00 0.00 0.00 2.57
911 912 3.172050 CTCAACGTCCGACTAGTGATTG 58.828 50.000 0.00 0.00 0.00 2.67
912 913 2.163815 CCTCAACGTCCGACTAGTGATT 59.836 50.000 0.00 0.00 0.00 2.57
913 914 1.743958 CCTCAACGTCCGACTAGTGAT 59.256 52.381 0.00 0.00 0.00 3.06
914 915 1.162698 CCTCAACGTCCGACTAGTGA 58.837 55.000 0.00 0.00 0.00 3.41
915 916 0.879765 ACCTCAACGTCCGACTAGTG 59.120 55.000 0.00 0.00 0.00 2.74
916 917 0.879765 CACCTCAACGTCCGACTAGT 59.120 55.000 0.00 0.00 0.00 2.57
917 918 0.879765 ACACCTCAACGTCCGACTAG 59.120 55.000 0.00 0.00 0.00 2.57
918 919 1.806542 GTACACCTCAACGTCCGACTA 59.193 52.381 0.00 0.00 0.00 2.59
919 920 0.595095 GTACACCTCAACGTCCGACT 59.405 55.000 0.00 0.00 0.00 4.18
920 921 0.311790 TGTACACCTCAACGTCCGAC 59.688 55.000 0.00 0.00 0.00 4.79
921 922 0.311790 GTGTACACCTCAACGTCCGA 59.688 55.000 15.42 0.00 0.00 4.55
922 923 1.000233 CGTGTACACCTCAACGTCCG 61.000 60.000 20.11 0.57 0.00 4.79
923 924 0.665369 CCGTGTACACCTCAACGTCC 60.665 60.000 20.11 0.00 0.00 4.79
932 933 1.375523 CCAGCCTTCCGTGTACACC 60.376 63.158 20.11 5.05 0.00 4.16
1039 1044 1.670967 GGATTGTTGGAGCAAGCAAGC 60.671 52.381 0.00 0.00 36.58 4.01
1040 1045 1.614903 TGGATTGTTGGAGCAAGCAAG 59.385 47.619 0.00 0.00 36.58 4.01
1041 1046 1.702182 TGGATTGTTGGAGCAAGCAA 58.298 45.000 0.00 0.00 36.58 3.91
1042 1047 1.546923 CATGGATTGTTGGAGCAAGCA 59.453 47.619 0.00 0.00 36.58 3.91
1065 1070 1.730487 CTCATGGTCGGAGTCGGAG 59.270 63.158 0.00 0.00 36.95 4.63
1066 1071 2.415608 GCTCATGGTCGGAGTCGGA 61.416 63.158 0.00 0.00 36.95 4.55
1067 1072 2.105128 GCTCATGGTCGGAGTCGG 59.895 66.667 0.00 0.00 36.95 4.79
1068 1073 2.278206 CGCTCATGGTCGGAGTCG 60.278 66.667 0.00 0.00 34.83 4.18
1069 1074 2.583593 GCGCTCATGGTCGGAGTC 60.584 66.667 0.00 0.00 34.83 3.36
1070 1075 4.148825 GGCGCTCATGGTCGGAGT 62.149 66.667 7.64 0.00 34.83 3.85
1155 1160 3.099170 AAGATGGCGGGGATGGCT 61.099 61.111 0.00 0.00 35.06 4.75
1965 2028 4.673298 TCGGCGCGGAAGAAGCAA 62.673 61.111 15.97 0.00 37.89 3.91
2028 2109 4.735132 GTGCTCCTGTACCGCGCA 62.735 66.667 8.75 0.00 34.52 6.09
2154 2274 3.742385 TGAATCATCAGCACACACAAGA 58.258 40.909 0.00 0.00 0.00 3.02
2157 2277 5.009811 TGAATTTGAATCATCAGCACACACA 59.990 36.000 0.00 0.00 36.78 3.72
2158 2278 5.463286 TGAATTTGAATCATCAGCACACAC 58.537 37.500 0.00 0.00 36.78 3.82
2195 2374 6.392625 TGTACTACTACAGAGATTGCATCC 57.607 41.667 0.00 0.00 0.00 3.51
2210 2389 7.038302 TCCATCCTCAAGAAAACATGTACTACT 60.038 37.037 0.00 0.00 0.00 2.57
2214 2393 6.431234 AGTTCCATCCTCAAGAAAACATGTAC 59.569 38.462 0.00 0.00 0.00 2.90
2216 2395 5.242393 CAGTTCCATCCTCAAGAAAACATGT 59.758 40.000 0.00 0.00 0.00 3.21
2217 2396 5.242393 ACAGTTCCATCCTCAAGAAAACATG 59.758 40.000 0.00 0.00 0.00 3.21
2218 2397 5.242393 CACAGTTCCATCCTCAAGAAAACAT 59.758 40.000 0.00 0.00 0.00 2.71
2219 2398 4.580167 CACAGTTCCATCCTCAAGAAAACA 59.420 41.667 0.00 0.00 0.00 2.83
2220 2399 4.022849 CCACAGTTCCATCCTCAAGAAAAC 60.023 45.833 0.00 0.00 0.00 2.43
2221 2400 4.141274 TCCACAGTTCCATCCTCAAGAAAA 60.141 41.667 0.00 0.00 0.00 2.29
2222 2401 3.394274 TCCACAGTTCCATCCTCAAGAAA 59.606 43.478 0.00 0.00 0.00 2.52
2225 2404 3.641434 ATCCACAGTTCCATCCTCAAG 57.359 47.619 0.00 0.00 0.00 3.02
2227 2406 2.912295 TGAATCCACAGTTCCATCCTCA 59.088 45.455 0.00 0.00 0.00 3.86
2228 2407 3.539604 CTGAATCCACAGTTCCATCCTC 58.460 50.000 0.00 0.00 33.73 3.71
2238 2417 3.256383 TGCAATTCCAACTGAATCCACAG 59.744 43.478 0.00 0.00 42.97 3.66
2240 2419 3.507233 TCTGCAATTCCAACTGAATCCAC 59.493 43.478 0.00 0.00 42.97 4.02
2243 2422 3.192001 TGCTCTGCAATTCCAACTGAATC 59.808 43.478 0.00 0.00 42.97 2.52
2250 2429 7.828508 ATTTATATCTGCTCTGCAATTCCAA 57.171 32.000 0.00 0.00 38.41 3.53
2255 2434 5.713861 GGGGAATTTATATCTGCTCTGCAAT 59.286 40.000 0.00 0.00 38.41 3.56
2256 2435 5.072741 GGGGAATTTATATCTGCTCTGCAA 58.927 41.667 0.00 0.00 38.41 4.08
2269 2448 7.585884 ATCATCTCATCTCAGGGGAATTTAT 57.414 36.000 0.00 0.00 0.00 1.40
2293 2472 9.554395 TGTCTGTAATTCTGTTTCTGTTGATAA 57.446 29.630 0.00 0.00 0.00 1.75
2294 2473 9.208022 CTGTCTGTAATTCTGTTTCTGTTGATA 57.792 33.333 0.00 0.00 0.00 2.15
2295 2474 7.716998 ACTGTCTGTAATTCTGTTTCTGTTGAT 59.283 33.333 0.00 0.00 0.00 2.57
2296 2475 7.047891 ACTGTCTGTAATTCTGTTTCTGTTGA 58.952 34.615 0.00 0.00 0.00 3.18
2297 2476 7.251704 ACTGTCTGTAATTCTGTTTCTGTTG 57.748 36.000 0.00 0.00 0.00 3.33
2298 2477 8.827677 GTTACTGTCTGTAATTCTGTTTCTGTT 58.172 33.333 5.71 0.00 42.36 3.16
2300 2479 8.365399 TGTTACTGTCTGTAATTCTGTTTCTG 57.635 34.615 5.71 0.00 42.36 3.02
2303 2482 8.902540 TCATGTTACTGTCTGTAATTCTGTTT 57.097 30.769 5.71 0.00 42.36 2.83
2304 2483 8.774586 GTTCATGTTACTGTCTGTAATTCTGTT 58.225 33.333 5.71 0.00 42.36 3.16
2306 2485 8.438513 CAGTTCATGTTACTGTCTGTAATTCTG 58.561 37.037 17.19 4.83 42.36 3.02
2308 2487 8.534333 TCAGTTCATGTTACTGTCTGTAATTC 57.466 34.615 21.61 0.00 42.36 2.17
2310 2489 8.902540 TTTCAGTTCATGTTACTGTCTGTAAT 57.097 30.769 21.61 0.00 42.36 1.89
2311 2490 8.725405 TTTTCAGTTCATGTTACTGTCTGTAA 57.275 30.769 21.61 11.37 42.77 2.41
2312 2491 8.773645 CATTTTCAGTTCATGTTACTGTCTGTA 58.226 33.333 21.61 7.41 42.77 2.74
2314 2493 7.864686 TCATTTTCAGTTCATGTTACTGTCTG 58.135 34.615 21.61 16.34 42.77 3.51
2315 2494 8.450578 TTCATTTTCAGTTCATGTTACTGTCT 57.549 30.769 21.61 9.23 42.77 3.41
2342 2521 7.041098 GGATGTATGTTCTGTTCTGTTCTGTTT 60.041 37.037 0.00 0.00 0.00 2.83
2359 2542 5.044476 TGTTTCCATTGTAGGGGATGTATGT 60.044 40.000 0.00 0.00 32.15 2.29
2360 2543 5.445069 TGTTTCCATTGTAGGGGATGTATG 58.555 41.667 0.00 0.00 32.15 2.39
2361 2544 5.725551 TGTTTCCATTGTAGGGGATGTAT 57.274 39.130 0.00 0.00 32.15 2.29
2362 2545 5.192722 TCATGTTTCCATTGTAGGGGATGTA 59.807 40.000 0.00 0.00 32.15 2.29
2363 2546 4.017591 TCATGTTTCCATTGTAGGGGATGT 60.018 41.667 0.00 0.00 32.15 3.06
2373 2556 5.106869 CCATTTGCAGTTCATGTTTCCATTG 60.107 40.000 0.00 0.00 0.00 2.82
2406 2589 6.644592 GCTGTGAATAACTTGCCATTTGTTTA 59.355 34.615 0.00 0.00 0.00 2.01
2435 2624 4.450122 GTCGTCGCCGTCGTGCTA 62.450 66.667 3.41 0.00 36.96 3.49
2444 2633 2.943034 GTCATCGTCGTCGTCGCC 60.943 66.667 7.01 0.00 38.33 5.54
2445 2634 2.202260 TGTCATCGTCGTCGTCGC 60.202 61.111 7.01 0.00 38.33 5.19
2447 2636 0.907837 CATGTGTCATCGTCGTCGTC 59.092 55.000 1.33 0.00 38.33 4.20
2450 2639 2.596452 AGTTCATGTGTCATCGTCGTC 58.404 47.619 0.00 0.00 0.00 4.20
2453 2642 3.859961 CCACTAGTTCATGTGTCATCGTC 59.140 47.826 0.00 0.00 32.76 4.20
2458 2647 2.899900 AGCTCCACTAGTTCATGTGTCA 59.100 45.455 0.00 0.00 32.76 3.58
2465 2656 3.230976 TCAAGTCAGCTCCACTAGTTCA 58.769 45.455 0.00 0.00 0.00 3.18
2482 2679 4.515361 AGAAAGTCATCAGCCATCTCAAG 58.485 43.478 0.00 0.00 0.00 3.02
2584 2787 5.105554 AGCTCAGTCAGTAACTCAGTAATGG 60.106 44.000 0.00 0.00 35.45 3.16
2617 2820 0.854908 TGGTGGATGGATGGATGCAT 59.145 50.000 0.00 0.00 41.76 3.96
2623 2826 2.423373 CCCTTAACTGGTGGATGGATGG 60.423 54.545 0.00 0.00 0.00 3.51
2624 2827 2.242196 ACCCTTAACTGGTGGATGGATG 59.758 50.000 0.00 0.00 33.94 3.51
2625 2828 2.509964 GACCCTTAACTGGTGGATGGAT 59.490 50.000 0.00 0.00 35.85 3.41
2626 2829 1.913419 GACCCTTAACTGGTGGATGGA 59.087 52.381 0.00 0.00 35.85 3.41
2719 2922 1.939082 CGGAGGAGGAGGAGGAGGAA 61.939 65.000 0.00 0.00 0.00 3.36
2859 3066 2.747446 CAAAGGTCCGATTTGTACCAGG 59.253 50.000 0.00 0.00 35.64 4.45
2872 3079 7.093945 TGCCTATGAAAATAAAGTCAAAGGTCC 60.094 37.037 0.00 0.00 0.00 4.46
3013 3220 4.405671 TCCTCCTGCTGCTGCTGC 62.406 66.667 22.51 22.51 40.48 5.25
3015 3222 2.523285 TTGTCCTCCTGCTGCTGCT 61.523 57.895 17.00 0.00 40.48 4.24
3016 3223 2.033141 TTGTCCTCCTGCTGCTGC 59.967 61.111 8.89 8.89 40.20 5.25
3017 3224 0.954449 CTGTTGTCCTCCTGCTGCTG 60.954 60.000 0.00 0.00 0.00 4.41
3018 3225 1.374190 CTGTTGTCCTCCTGCTGCT 59.626 57.895 0.00 0.00 0.00 4.24
3019 3226 2.331132 GCTGTTGTCCTCCTGCTGC 61.331 63.158 0.00 0.00 0.00 5.25
3020 3227 0.535780 TTGCTGTTGTCCTCCTGCTG 60.536 55.000 0.00 0.00 0.00 4.41
3021 3228 0.183492 TTTGCTGTTGTCCTCCTGCT 59.817 50.000 0.00 0.00 0.00 4.24
3022 3229 1.032014 TTTTGCTGTTGTCCTCCTGC 58.968 50.000 0.00 0.00 0.00 4.85
3023 3230 3.068590 ACATTTTTGCTGTTGTCCTCCTG 59.931 43.478 0.00 0.00 0.00 3.86
3026 3233 3.181476 ACCACATTTTTGCTGTTGTCCTC 60.181 43.478 0.00 0.00 0.00 3.71
3039 3246 2.765699 ACCAACTGAAGCACCACATTTT 59.234 40.909 0.00 0.00 0.00 1.82
3101 3351 2.357952 GGAGCCCAATGTTCGGTAAATC 59.642 50.000 0.00 0.00 0.00 2.17
3175 3429 4.041723 CAGGTTTCATCGTTTGTTTGTCC 58.958 43.478 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.