Multiple sequence alignment - TraesCS5D01G552400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G552400 chr5D 100.000 4912 0 0 1 4912 557828356 557823445 0.000000e+00 9071.0
1 TraesCS5D01G552400 chr5B 93.629 1083 44 11 3326 4396 704993217 704992148 0.000000e+00 1594.0
2 TraesCS5D01G552400 chr5B 92.366 1061 49 14 2252 3307 704994237 704993204 0.000000e+00 1482.0
3 TraesCS5D01G552400 chr5B 91.377 719 25 6 1602 2294 704995048 704994341 0.000000e+00 950.0
4 TraesCS5D01G552400 chr5B 90.196 561 18 4 918 1473 704995638 704995110 0.000000e+00 697.0
5 TraesCS5D01G552400 chr5B 89.116 147 16 0 4717 4863 705033090 705032944 3.020000e-42 183.0
6 TraesCS5D01G552400 chr5B 92.079 101 7 1 4594 4694 705033372 705033273 1.840000e-29 141.0
7 TraesCS5D01G552400 chr5B 90.000 70 5 2 782 850 705007311 705007243 6.770000e-14 89.8
8 TraesCS5D01G552400 chr4A 88.245 1157 69 29 3578 4685 610252633 610253771 0.000000e+00 1321.0
9 TraesCS5D01G552400 chr4A 95.390 629 25 3 2388 3016 610251442 610252066 0.000000e+00 998.0
10 TraesCS5D01G552400 chr4A 96.701 485 12 2 998 1482 610250070 610250550 0.000000e+00 804.0
11 TraesCS5D01G552400 chr4A 87.356 696 38 24 3351 3999 191901 192593 0.000000e+00 752.0
12 TraesCS5D01G552400 chr4A 92.537 469 26 8 1901 2368 610250894 610251354 0.000000e+00 664.0
13 TraesCS5D01G552400 chr4A 89.443 521 19 8 3068 3582 610252064 610252554 4.170000e-175 625.0
14 TraesCS5D01G552400 chr4A 87.759 482 35 14 2307 2782 190912 191375 4.320000e-150 542.0
15 TraesCS5D01G552400 chr4A 93.103 348 14 4 1104 1450 189652 189990 7.340000e-138 501.0
16 TraesCS5D01G552400 chr4A 91.809 293 13 9 1542 1834 610250571 610250852 9.910000e-107 398.0
17 TraesCS5D01G552400 chr4A 94.624 186 7 2 1601 1786 190105 190287 8.050000e-73 285.0
18 TraesCS5D01G552400 chr4A 83.755 277 9 18 2089 2339 190461 190727 3.820000e-56 230.0
19 TraesCS5D01G552400 chr4A 98.113 106 1 1 1913 2018 190326 190430 3.020000e-42 183.0
20 TraesCS5D01G552400 chr4A 90.385 104 9 1 1907 2010 87519 87621 8.580000e-28 135.0
21 TraesCS5D01G552400 chr4A 82.759 116 16 4 3020 3134 577367422 577367310 3.130000e-17 100.0
22 TraesCS5D01G552400 chr2A 90.561 784 70 4 1 783 623743159 623742379 0.000000e+00 1035.0
23 TraesCS5D01G552400 chr2A 93.750 48 2 1 4390 4437 196901303 196901349 2.450000e-08 71.3
24 TraesCS5D01G552400 chr1A 89.400 783 78 4 1 782 28735954 28736732 0.000000e+00 981.0
25 TraesCS5D01G552400 chr1A 84.082 245 39 0 1205 1449 579104706 579104950 2.290000e-58 237.0
26 TraesCS5D01G552400 chr1A 76.159 302 54 16 490 783 573638625 573638334 5.130000e-30 143.0
27 TraesCS5D01G552400 chr7D 87.898 785 86 7 1 783 63278694 63277917 0.000000e+00 915.0
28 TraesCS5D01G552400 chr7D 89.011 91 9 1 4486 4576 436121058 436121147 1.450000e-20 111.0
29 TraesCS5D01G552400 chrUn 87.771 785 86 8 1 783 91201123 91201899 0.000000e+00 909.0
30 TraesCS5D01G552400 chrUn 74.393 453 84 22 3339 3771 316149788 316149348 1.090000e-36 165.0
31 TraesCS5D01G552400 chrUn 89.362 94 8 2 4481 4574 117245784 117245693 3.110000e-22 117.0
32 TraesCS5D01G552400 chrUn 88.636 88 9 1 4485 4572 314520374 314520288 6.720000e-19 106.0
33 TraesCS5D01G552400 chr5A 90.196 612 56 4 1 611 686996723 686997331 0.000000e+00 795.0
34 TraesCS5D01G552400 chr5A 77.382 787 170 7 1 784 694506122 694506903 1.250000e-125 460.0
35 TraesCS5D01G552400 chr5A 89.773 176 18 0 607 782 687005867 687006042 4.950000e-55 226.0
36 TraesCS5D01G552400 chr4D 81.818 1045 58 61 3351 4297 462468 463478 0.000000e+00 756.0
37 TraesCS5D01G552400 chr4D 89.114 395 25 9 1066 1458 459846 460224 4.450000e-130 475.0
38 TraesCS5D01G552400 chr4D 84.521 407 16 23 1900 2287 460798 461176 4.670000e-95 359.0
39 TraesCS5D01G552400 chr4D 86.667 285 21 9 1602 1886 460323 460590 2.870000e-77 300.0
40 TraesCS5D01G552400 chr4D 85.217 230 19 6 2918 3132 461846 462075 6.400000e-54 222.0
41 TraesCS5D01G552400 chr4D 86.667 180 15 4 2612 2782 461621 461800 1.800000e-44 191.0
42 TraesCS5D01G552400 chr4D 90.805 87 7 1 4486 4572 267510578 267510663 1.120000e-21 115.0
43 TraesCS5D01G552400 chr4D 88.421 95 10 1 4485 4579 361082463 361082370 4.020000e-21 113.0
44 TraesCS5D01G552400 chr4D 82.569 109 17 2 3024 3132 25679951 25680057 1.460000e-15 95.3
45 TraesCS5D01G552400 chr7A 90.391 562 52 2 1 561 598942950 598942390 0.000000e+00 737.0
46 TraesCS5D01G552400 chr4B 86.629 703 40 27 3351 3999 232548 233250 0.000000e+00 728.0
47 TraesCS5D01G552400 chr4B 87.552 482 36 14 2307 2782 231559 232022 2.010000e-148 536.0
48 TraesCS5D01G552400 chr4B 93.103 348 14 4 1104 1450 230300 230638 7.340000e-138 501.0
49 TraesCS5D01G552400 chr4B 93.238 281 12 1 2593 2866 653273225 653272945 1.650000e-109 407.0
50 TraesCS5D01G552400 chr4B 92.857 224 9 5 3326 3546 653272770 653272551 7.930000e-83 318.0
51 TraesCS5D01G552400 chr4B 94.624 186 7 2 1601 1786 230753 230935 8.050000e-73 285.0
52 TraesCS5D01G552400 chr4B 84.058 276 9 18 2089 2339 231109 231374 2.960000e-57 233.0
53 TraesCS5D01G552400 chr4B 98.113 106 1 1 1913 2018 230974 231078 3.020000e-42 183.0
54 TraesCS5D01G552400 chr4B 95.146 103 5 0 3200 3302 653272865 653272763 3.930000e-36 163.0
55 TraesCS5D01G552400 chr4B 90.385 104 9 1 1907 2010 129282 129384 8.580000e-28 135.0
56 TraesCS5D01G552400 chr4B 96.078 51 2 0 2297 2347 19043462 19043412 3.150000e-12 84.2
57 TraesCS5D01G552400 chr4B 97.143 35 0 1 4401 4435 40651516 40651549 1.910000e-04 58.4
58 TraesCS5D01G552400 chr4B 89.130 46 5 0 4392 4437 613029987 613029942 1.910000e-04 58.4
59 TraesCS5D01G552400 chr3A 94.265 279 16 0 2593 2871 528679182 528678904 1.260000e-115 427.0
60 TraesCS5D01G552400 chr3A 86.782 348 15 13 3200 3546 528678829 528678512 4.670000e-95 359.0
61 TraesCS5D01G552400 chr3A 92.308 130 10 0 2927 3056 528678957 528678828 8.400000e-43 185.0
62 TraesCS5D01G552400 chr3A 97.436 39 1 0 4397 4435 567566937 567566899 3.170000e-07 67.6
63 TraesCS5D01G552400 chr2D 93.594 281 11 1 2593 2866 1690301 1690021 3.540000e-111 412.0
64 TraesCS5D01G552400 chr2D 87.679 349 11 6 3200 3546 1689941 1689623 1.290000e-100 377.0
65 TraesCS5D01G552400 chr2D 86.598 97 12 1 4486 4582 594195849 594195754 6.720000e-19 106.0
66 TraesCS5D01G552400 chr7B 86.510 341 46 0 153 493 480338423 480338083 4.640000e-100 375.0
67 TraesCS5D01G552400 chr7B 89.744 234 19 4 550 782 480338080 480337851 1.340000e-75 294.0
68 TraesCS5D01G552400 chr7B 87.234 94 10 2 4482 4575 640488 640579 6.720000e-19 106.0
69 TraesCS5D01G552400 chr6B 74.936 778 181 10 12 783 535934815 535935584 1.310000e-90 344.0
70 TraesCS5D01G552400 chr1B 83.058 242 41 0 1208 1449 671296442 671296201 2.300000e-53 220.0
71 TraesCS5D01G552400 chr1B 83.058 242 41 0 1208 1449 671339866 671339625 2.300000e-53 220.0
72 TraesCS5D01G552400 chr1B 83.058 242 41 0 1208 1449 671368145 671367904 2.300000e-53 220.0
73 TraesCS5D01G552400 chr1B 90.217 92 8 1 4483 4574 120887259 120887169 8.640000e-23 119.0
74 TraesCS5D01G552400 chr2B 82.667 150 19 5 2417 2562 99014457 99014311 5.160000e-25 126.0
75 TraesCS5D01G552400 chr2B 94.340 53 3 0 2819 2871 76096195 76096143 1.130000e-11 82.4
76 TraesCS5D01G552400 chr1D 89.888 89 8 1 4486 4574 41495896 41495983 4.020000e-21 113.0
77 TraesCS5D01G552400 chr3B 94.872 39 2 0 4397 4435 9687436 9687474 1.480000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G552400 chr5D 557823445 557828356 4911 True 9071.000000 9071 100.000000 1 4912 1 chr5D.!!$R1 4911
1 TraesCS5D01G552400 chr5B 704992148 704995638 3490 True 1180.750000 1594 91.892000 918 4396 4 chr5B.!!$R2 3478
2 TraesCS5D01G552400 chr4A 610250070 610253771 3701 False 801.666667 1321 92.354167 998 4685 6 chr4A.!!$F3 3687
3 TraesCS5D01G552400 chr4A 189652 192593 2941 False 415.500000 752 90.785000 1104 3999 6 chr4A.!!$F2 2895
4 TraesCS5D01G552400 chr2A 623742379 623743159 780 True 1035.000000 1035 90.561000 1 783 1 chr2A.!!$R1 782
5 TraesCS5D01G552400 chr1A 28735954 28736732 778 False 981.000000 981 89.400000 1 782 1 chr1A.!!$F1 781
6 TraesCS5D01G552400 chr7D 63277917 63278694 777 True 915.000000 915 87.898000 1 783 1 chr7D.!!$R1 782
7 TraesCS5D01G552400 chrUn 91201123 91201899 776 False 909.000000 909 87.771000 1 783 1 chrUn.!!$F1 782
8 TraesCS5D01G552400 chr5A 686996723 686997331 608 False 795.000000 795 90.196000 1 611 1 chr5A.!!$F1 610
9 TraesCS5D01G552400 chr5A 694506122 694506903 781 False 460.000000 460 77.382000 1 784 1 chr5A.!!$F3 783
10 TraesCS5D01G552400 chr4D 459846 463478 3632 False 383.833333 756 85.667333 1066 4297 6 chr4D.!!$F3 3231
11 TraesCS5D01G552400 chr7A 598942390 598942950 560 True 737.000000 737 90.391000 1 561 1 chr7A.!!$R1 560
12 TraesCS5D01G552400 chr4B 230300 233250 2950 False 411.000000 728 90.679833 1104 3999 6 chr4B.!!$F3 2895
13 TraesCS5D01G552400 chr4B 653272551 653273225 674 True 296.000000 407 93.747000 2593 3546 3 chr4B.!!$R3 953
14 TraesCS5D01G552400 chr3A 528678512 528679182 670 True 323.666667 427 91.118333 2593 3546 3 chr3A.!!$R2 953
15 TraesCS5D01G552400 chr2D 1689623 1690301 678 True 394.500000 412 90.636500 2593 3546 2 chr2D.!!$R2 953
16 TraesCS5D01G552400 chr7B 480337851 480338423 572 True 334.500000 375 88.127000 153 782 2 chr7B.!!$R1 629
17 TraesCS5D01G552400 chr6B 535934815 535935584 769 False 344.000000 344 74.936000 12 783 1 chr6B.!!$F1 771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
845 848 0.174845 CAGCCGTCGTCTAATGGGAA 59.825 55.000 0.0 0.0 0.0 3.97 F
847 850 0.458669 GCCGTCGTCTAATGGGAAGA 59.541 55.000 0.0 0.0 0.0 2.87 F
1845 1942 0.179051 CTCATGGGGCTGCTCTTCTC 60.179 60.000 0.0 0.0 0.0 2.87 F
1846 1943 0.619832 TCATGGGGCTGCTCTTCTCT 60.620 55.000 0.0 0.0 0.0 3.10 F
2412 2971 1.403647 CCATGCTGATGTTGCCAAGTG 60.404 52.381 0.0 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1717 1801 0.038526 GCGTGTCCCTCTCTTCGAAA 60.039 55.000 0.00 0.00 0.00 3.46 R
2636 3228 0.606604 ACGGAGTTTGCCATACGACT 59.393 50.000 0.00 0.00 37.78 4.18 R
3123 3878 0.980423 GCAGAGGGGAGAACAGTTCT 59.020 55.000 16.11 16.11 44.21 3.01 R
3319 4301 2.096762 GCCAAATGTTTCAAGCTTTCGC 60.097 45.455 0.00 0.00 0.00 4.70 R
4409 5642 1.010419 CAAAAGGGCTCATGCGTTGC 61.010 55.000 0.00 0.00 40.82 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 5.441709 TGCATGAAATATTGTCGCATGAT 57.558 34.783 17.77 0.00 38.82 2.45
134 135 1.194781 GGGCAGTCTGGAGGTCAAGA 61.195 60.000 1.14 0.00 0.00 3.02
178 179 8.200792 AGAAATCTATGACAGTCCATTACAGAC 58.799 37.037 0.00 0.00 34.31 3.51
204 205 7.201821 CCCATCTCTTTATCAAGGCGTTTTTAT 60.202 37.037 0.00 0.00 0.00 1.40
283 284 0.625849 CCTTGTCATTGGCTACCCCT 59.374 55.000 0.00 0.00 0.00 4.79
369 370 4.616553 TGGAGTAGTTTGTAGGGATGCTA 58.383 43.478 0.00 0.00 0.00 3.49
419 421 3.441222 TCACATTTCAGCACATCCATGAC 59.559 43.478 0.00 0.00 0.00 3.06
446 448 6.364701 TGTTATATTGGAAGCTATGGCAGTT 58.635 36.000 3.10 0.00 41.70 3.16
567 569 4.384098 CCGGGGATCATGCAGCTATTATTA 60.384 45.833 0.00 0.00 0.00 0.98
568 570 5.371526 CGGGGATCATGCAGCTATTATTAT 58.628 41.667 0.00 0.00 0.00 1.28
569 571 5.468072 CGGGGATCATGCAGCTATTATTATC 59.532 44.000 0.00 0.00 0.00 1.75
650 653 2.079925 GCTTGAATTTCGAGGCTCACT 58.920 47.619 15.95 0.00 0.00 3.41
696 699 1.536943 GGGTTTGGCCGCCATGTTTA 61.537 55.000 14.30 0.00 38.44 2.01
701 704 2.201921 TGGCCGCCATGTTTAGTTAA 57.798 45.000 8.43 0.00 0.00 2.01
807 810 9.841880 AAGTTGTGAGTTAAAAGAAAAAGAGTC 57.158 29.630 0.00 0.00 0.00 3.36
808 811 8.459635 AGTTGTGAGTTAAAAGAAAAAGAGTCC 58.540 33.333 0.00 0.00 0.00 3.85
809 812 8.459635 GTTGTGAGTTAAAAGAAAAAGAGTCCT 58.540 33.333 0.00 0.00 0.00 3.85
810 813 7.985476 TGTGAGTTAAAAGAAAAAGAGTCCTG 58.015 34.615 0.00 0.00 0.00 3.86
811 814 7.827236 TGTGAGTTAAAAGAAAAAGAGTCCTGA 59.173 33.333 0.00 0.00 0.00 3.86
812 815 8.674607 GTGAGTTAAAAGAAAAAGAGTCCTGAA 58.325 33.333 0.00 0.00 0.00 3.02
813 816 9.238368 TGAGTTAAAAGAAAAAGAGTCCTGAAA 57.762 29.630 0.00 0.00 0.00 2.69
820 823 8.980481 AAGAAAAAGAGTCCTGAAAATACTCA 57.020 30.769 0.00 0.00 41.69 3.41
821 824 8.980481 AGAAAAAGAGTCCTGAAAATACTCAA 57.020 30.769 0.00 0.00 41.69 3.02
822 825 9.579932 AGAAAAAGAGTCCTGAAAATACTCAAT 57.420 29.630 0.00 0.00 41.69 2.57
823 826 9.833182 GAAAAAGAGTCCTGAAAATACTCAATC 57.167 33.333 0.00 0.00 41.69 2.67
824 827 7.929941 AAAGAGTCCTGAAAATACTCAATCC 57.070 36.000 0.00 0.00 41.69 3.01
825 828 5.995446 AGAGTCCTGAAAATACTCAATCCC 58.005 41.667 0.00 0.00 41.69 3.85
826 829 5.104318 AGAGTCCTGAAAATACTCAATCCCC 60.104 44.000 0.00 0.00 41.69 4.81
827 830 4.540099 AGTCCTGAAAATACTCAATCCCCA 59.460 41.667 0.00 0.00 0.00 4.96
828 831 4.884164 GTCCTGAAAATACTCAATCCCCAG 59.116 45.833 0.00 0.00 0.00 4.45
829 832 3.633986 CCTGAAAATACTCAATCCCCAGC 59.366 47.826 0.00 0.00 0.00 4.85
830 833 3.631250 TGAAAATACTCAATCCCCAGCC 58.369 45.455 0.00 0.00 0.00 4.85
831 834 2.348411 AAATACTCAATCCCCAGCCG 57.652 50.000 0.00 0.00 0.00 5.52
832 835 1.213296 AATACTCAATCCCCAGCCGT 58.787 50.000 0.00 0.00 0.00 5.68
833 836 0.759346 ATACTCAATCCCCAGCCGTC 59.241 55.000 0.00 0.00 0.00 4.79
834 837 1.672854 TACTCAATCCCCAGCCGTCG 61.673 60.000 0.00 0.00 0.00 5.12
835 838 3.000819 TCAATCCCCAGCCGTCGT 61.001 61.111 0.00 0.00 0.00 4.34
836 839 2.511600 CAATCCCCAGCCGTCGTC 60.512 66.667 0.00 0.00 0.00 4.20
837 840 2.683933 AATCCCCAGCCGTCGTCT 60.684 61.111 0.00 0.00 0.00 4.18
838 841 1.380785 AATCCCCAGCCGTCGTCTA 60.381 57.895 0.00 0.00 0.00 2.59
839 842 0.974010 AATCCCCAGCCGTCGTCTAA 60.974 55.000 0.00 0.00 0.00 2.10
840 843 0.759436 ATCCCCAGCCGTCGTCTAAT 60.759 55.000 0.00 0.00 0.00 1.73
841 844 1.227263 CCCCAGCCGTCGTCTAATG 60.227 63.158 0.00 0.00 0.00 1.90
842 845 1.227263 CCCAGCCGTCGTCTAATGG 60.227 63.158 0.00 0.00 0.00 3.16
843 846 1.227263 CCAGCCGTCGTCTAATGGG 60.227 63.158 0.00 0.00 0.00 4.00
844 847 1.672854 CCAGCCGTCGTCTAATGGGA 61.673 60.000 0.00 0.00 0.00 4.37
845 848 0.174845 CAGCCGTCGTCTAATGGGAA 59.825 55.000 0.00 0.00 0.00 3.97
846 849 0.460311 AGCCGTCGTCTAATGGGAAG 59.540 55.000 0.00 0.00 0.00 3.46
847 850 0.458669 GCCGTCGTCTAATGGGAAGA 59.541 55.000 0.00 0.00 0.00 2.87
848 851 1.068741 GCCGTCGTCTAATGGGAAGAT 59.931 52.381 0.00 0.00 0.00 2.40
849 852 2.483188 GCCGTCGTCTAATGGGAAGATT 60.483 50.000 0.00 0.00 0.00 2.40
850 853 3.123804 CCGTCGTCTAATGGGAAGATTG 58.876 50.000 0.00 0.00 0.00 2.67
851 854 2.540101 CGTCGTCTAATGGGAAGATTGC 59.460 50.000 0.00 0.00 0.00 3.56
852 855 3.531538 GTCGTCTAATGGGAAGATTGCA 58.468 45.455 0.00 0.00 0.00 4.08
853 856 3.938963 GTCGTCTAATGGGAAGATTGCAA 59.061 43.478 0.00 0.00 0.00 4.08
854 857 4.576463 GTCGTCTAATGGGAAGATTGCAAT 59.424 41.667 12.83 12.83 0.00 3.56
855 858 5.066505 GTCGTCTAATGGGAAGATTGCAATT 59.933 40.000 14.33 0.00 0.00 2.32
856 859 6.260050 GTCGTCTAATGGGAAGATTGCAATTA 59.740 38.462 14.33 0.00 0.00 1.40
857 860 6.826231 TCGTCTAATGGGAAGATTGCAATTAA 59.174 34.615 14.33 0.00 0.00 1.40
858 861 7.012327 TCGTCTAATGGGAAGATTGCAATTAAG 59.988 37.037 14.33 1.79 0.00 1.85
859 862 7.428826 GTCTAATGGGAAGATTGCAATTAAGG 58.571 38.462 14.33 0.00 0.00 2.69
860 863 7.285401 GTCTAATGGGAAGATTGCAATTAAGGA 59.715 37.037 14.33 0.00 0.00 3.36
861 864 6.872585 AATGGGAAGATTGCAATTAAGGAA 57.127 33.333 14.33 0.00 0.00 3.36
862 865 5.920193 TGGGAAGATTGCAATTAAGGAAG 57.080 39.130 14.33 0.00 0.00 3.46
863 866 5.332743 TGGGAAGATTGCAATTAAGGAAGT 58.667 37.500 14.33 0.00 0.00 3.01
864 867 6.489603 TGGGAAGATTGCAATTAAGGAAGTA 58.510 36.000 14.33 0.00 0.00 2.24
865 868 6.603201 TGGGAAGATTGCAATTAAGGAAGTAG 59.397 38.462 14.33 0.00 0.00 2.57
866 869 6.603599 GGGAAGATTGCAATTAAGGAAGTAGT 59.396 38.462 14.33 0.00 0.00 2.73
867 870 7.773690 GGGAAGATTGCAATTAAGGAAGTAGTA 59.226 37.037 14.33 0.00 0.00 1.82
868 871 9.174166 GGAAGATTGCAATTAAGGAAGTAGTAA 57.826 33.333 14.33 0.00 0.00 2.24
905 908 9.461734 AAACCCTTCCCTCTTATATATACTTGT 57.538 33.333 0.00 0.00 0.00 3.16
961 969 5.622378 GTCCAGTCAATCGAACAAGAAATC 58.378 41.667 0.00 0.00 0.00 2.17
1453 1534 4.495422 AGTGCTATACGTCAAGGTTCTTG 58.505 43.478 0.00 1.53 0.00 3.02
1464 1545 5.277345 CGTCAAGGTTCTTGTCTTTTCGATT 60.277 40.000 7.42 0.00 0.00 3.34
1496 1577 9.105844 TCTTCTCTAATTAGGATTAGGATTGGG 57.894 37.037 12.54 0.00 43.21 4.12
1497 1578 9.105844 CTTCTCTAATTAGGATTAGGATTGGGA 57.894 37.037 12.54 0.00 43.21 4.37
1498 1579 9.635284 TTCTCTAATTAGGATTAGGATTGGGAT 57.365 33.333 12.54 0.00 43.21 3.85
1499 1580 9.635284 TCTCTAATTAGGATTAGGATTGGGATT 57.365 33.333 12.54 0.00 43.21 3.01
1500 1581 9.678260 CTCTAATTAGGATTAGGATTGGGATTG 57.322 37.037 12.54 0.00 43.21 2.67
1501 1582 8.614814 TCTAATTAGGATTAGGATTGGGATTGG 58.385 37.037 12.54 0.00 43.21 3.16
1502 1583 7.420624 AATTAGGATTAGGATTGGGATTGGA 57.579 36.000 0.00 0.00 0.00 3.53
1503 1584 6.857083 TTAGGATTAGGATTGGGATTGGAA 57.143 37.500 0.00 0.00 0.00 3.53
1504 1585 5.955850 AGGATTAGGATTGGGATTGGAAT 57.044 39.130 0.00 0.00 0.00 3.01
1505 1586 6.299227 AGGATTAGGATTGGGATTGGAATT 57.701 37.500 0.00 0.00 0.00 2.17
1506 1587 6.080009 AGGATTAGGATTGGGATTGGAATTG 58.920 40.000 0.00 0.00 0.00 2.32
1507 1588 5.246883 GGATTAGGATTGGGATTGGAATTGG 59.753 44.000 0.00 0.00 0.00 3.16
1508 1589 5.480058 TTAGGATTGGGATTGGAATTGGA 57.520 39.130 0.00 0.00 0.00 3.53
1509 1590 4.564616 AGGATTGGGATTGGAATTGGAT 57.435 40.909 0.00 0.00 0.00 3.41
1519 1600 6.352137 GGGATTGGAATTGGATGTTTAGCTTT 60.352 38.462 0.00 0.00 0.00 3.51
1528 1609 7.630242 TTGGATGTTTAGCTTTCAATCTAGG 57.370 36.000 0.00 0.00 0.00 3.02
1530 1611 7.402054 TGGATGTTTAGCTTTCAATCTAGGAA 58.598 34.615 0.00 0.00 0.00 3.36
1540 1621 9.084533 AGCTTTCAATCTAGGAATAGTAGGTAG 57.915 37.037 0.00 0.00 0.00 3.18
1541 1622 8.308207 GCTTTCAATCTAGGAATAGTAGGTAGG 58.692 40.741 0.00 0.00 0.00 3.18
1545 1626 8.108364 TCAATCTAGGAATAGTAGGTAGGTAGC 58.892 40.741 0.00 0.00 0.00 3.58
1548 1632 7.631933 TCTAGGAATAGTAGGTAGGTAGCATC 58.368 42.308 0.00 0.00 0.00 3.91
1549 1633 6.471942 AGGAATAGTAGGTAGGTAGCATCT 57.528 41.667 0.00 0.00 0.00 2.90
1552 1636 8.625571 AGGAATAGTAGGTAGGTAGCATCTATT 58.374 37.037 11.83 11.83 36.09 1.73
1553 1637 9.257428 GGAATAGTAGGTAGGTAGCATCTATTT 57.743 37.037 12.60 0.00 34.93 1.40
1556 1640 9.689501 ATAGTAGGTAGGTAGCATCTATTTCTC 57.310 37.037 0.00 0.00 0.00 2.87
1568 1652 8.674263 AGCATCTATTTCTCGAATTGAATCTT 57.326 30.769 0.00 0.00 34.10 2.40
1569 1653 8.772705 AGCATCTATTTCTCGAATTGAATCTTC 58.227 33.333 0.00 0.00 34.10 2.87
1591 1675 8.588472 TCTTCAATCCATGTATACTGATACTGG 58.412 37.037 4.17 2.41 39.04 4.00
1592 1676 8.491045 TTCAATCCATGTATACTGATACTGGA 57.509 34.615 4.17 13.70 42.99 3.86
1593 1677 8.670521 TCAATCCATGTATACTGATACTGGAT 57.329 34.615 15.73 15.73 45.92 3.41
1594 1678 8.534496 TCAATCCATGTATACTGATACTGGATG 58.466 37.037 19.01 15.34 44.83 3.51
1595 1679 6.857437 TCCATGTATACTGATACTGGATGG 57.143 41.667 4.17 5.70 38.98 3.51
1596 1680 6.561294 TCCATGTATACTGATACTGGATGGA 58.439 40.000 10.25 10.25 41.66 3.41
1597 1681 7.191918 TCCATGTATACTGATACTGGATGGAT 58.808 38.462 10.25 0.00 40.41 3.41
1598 1682 7.124750 TCCATGTATACTGATACTGGATGGATG 59.875 40.741 10.25 0.00 40.41 3.51
1599 1683 6.286240 TGTATACTGATACTGGATGGATGC 57.714 41.667 4.17 0.00 39.04 3.91
1717 1801 3.368531 GCAAGATTACCCTCGACAAGACT 60.369 47.826 0.00 0.00 0.00 3.24
1723 1807 1.684983 ACCCTCGACAAGACTTTCGAA 59.315 47.619 17.25 0.00 43.35 3.71
1842 1939 1.142465 CATACTCATGGGGCTGCTCTT 59.858 52.381 0.00 0.00 0.00 2.85
1843 1940 0.833287 TACTCATGGGGCTGCTCTTC 59.167 55.000 0.00 0.00 0.00 2.87
1844 1941 0.913451 ACTCATGGGGCTGCTCTTCT 60.913 55.000 0.00 0.00 0.00 2.85
1845 1942 0.179051 CTCATGGGGCTGCTCTTCTC 60.179 60.000 0.00 0.00 0.00 2.87
1846 1943 0.619832 TCATGGGGCTGCTCTTCTCT 60.620 55.000 0.00 0.00 0.00 3.10
1904 2019 8.562892 ACTTTGATGGCAATATTATTCTCTTCG 58.437 33.333 0.00 0.00 33.25 3.79
2059 2363 2.123342 GAGCGTTCATGGAGAGAATCG 58.877 52.381 0.00 0.00 42.67 3.34
2084 2389 8.259872 CGTATCACTAATATGTTCACTTTCACG 58.740 37.037 0.00 0.00 0.00 4.35
2152 2457 2.195139 GCCATGGAGATGCAGGCT 59.805 61.111 18.40 0.00 42.01 4.58
2396 2955 2.947652 CTGTTGGAATCCTGCTACCATG 59.052 50.000 0.00 0.00 32.31 3.66
2412 2971 1.403647 CCATGCTGATGTTGCCAAGTG 60.404 52.381 0.00 0.00 0.00 3.16
2448 3009 5.627499 TTCATCAGACCAAACTTGTATGC 57.373 39.130 0.00 0.00 0.00 3.14
2512 3073 5.292834 CGATGATAAGTTGCACACTGAATCT 59.707 40.000 16.48 8.94 35.12 2.40
2517 3078 3.743521 AGTTGCACACTGAATCTTGCTA 58.256 40.909 0.00 0.00 35.91 3.49
2637 3229 7.678947 AGTGTTAGATTTCATCAGACCAAAG 57.321 36.000 0.00 0.00 0.00 2.77
2638 3230 7.227156 AGTGTTAGATTTCATCAGACCAAAGT 58.773 34.615 0.00 0.00 0.00 2.66
2639 3231 7.389053 AGTGTTAGATTTCATCAGACCAAAGTC 59.611 37.037 0.00 0.00 43.89 3.01
2797 3398 8.618677 ACATCTGTTTTGCTCTGTATTATCATG 58.381 33.333 0.00 0.00 0.00 3.07
2890 3633 5.163152 CCCCTCTTAGTTTCCAGAAGCATAT 60.163 44.000 0.00 0.00 0.00 1.78
2966 3709 2.677836 GCTACGTGCATGATTTGAGGAA 59.322 45.455 14.17 0.00 42.31 3.36
3001 3752 5.069251 TCTGCCTTCTGCTATCTAACCTTAC 59.931 44.000 0.00 0.00 42.00 2.34
3007 3758 7.923878 CCTTCTGCTATCTAACCTTACTTTCTC 59.076 40.741 0.00 0.00 0.00 2.87
3020 3771 6.127897 ACCTTACTTTCTCAAAGCATGCATAC 60.128 38.462 21.98 0.00 42.27 2.39
3036 3788 8.137437 AGCATGCATACAACATTATACTTTTCC 58.863 33.333 21.98 0.00 0.00 3.13
3064 3816 3.689161 TGAAACACGCTATCCTTCCATTG 59.311 43.478 0.00 0.00 0.00 2.82
3084 3837 9.656040 TCCATTGAAATGTCAAATATTTGGAAG 57.344 29.630 24.40 2.97 46.66 3.46
3156 3911 5.026121 TCCCCTCTGCCATATCTATACAAG 58.974 45.833 0.00 0.00 0.00 3.16
3222 3977 6.371548 CCTCATGGACTTGTTCTTAATTTCGA 59.628 38.462 0.00 0.00 34.57 3.71
3305 4287 9.893305 GTACTGTTATTACTTGCTTGAAACATT 57.107 29.630 0.00 0.00 0.00 2.71
3472 4473 0.539051 GGCAGCACAGAGGTATCACT 59.461 55.000 0.00 0.00 0.00 3.41
3602 4731 5.411831 ACATCAGAGCATTCAGTGAACTA 57.588 39.130 7.96 0.00 0.00 2.24
3611 4740 5.047021 AGCATTCAGTGAACTAGCTAGAACA 60.047 40.000 27.45 20.77 29.99 3.18
3964 5156 3.988976 TTTCTGTGAGGGAGGAATGAG 57.011 47.619 0.00 0.00 0.00 2.90
4114 5337 2.729194 TGGGTGGGTGTTATTACATGC 58.271 47.619 0.00 0.00 36.50 4.06
4193 5416 5.096849 TCTCAAGTTTTTGTTGCGTAAACC 58.903 37.500 0.00 0.00 38.06 3.27
4303 5533 0.893270 TTTGAGCCCATGGTGTTCCG 60.893 55.000 11.73 0.00 36.30 4.30
4307 5537 4.047125 CCCATGGTGTTCCGGGCT 62.047 66.667 11.73 0.00 36.30 5.19
4370 5603 1.373497 CGCTGGAAGAAGACGCAGT 60.373 57.895 0.00 0.00 40.46 4.40
4383 5616 3.372730 GCAGTGCGCCCATTTGGA 61.373 61.111 4.18 0.00 37.39 3.53
4393 5626 1.228793 CCATTTGGACCGGCCCATA 59.771 57.895 11.52 6.30 35.87 2.74
4396 5629 1.149101 ATTTGGACCGGCCCATATCT 58.851 50.000 11.52 0.00 35.87 1.98
4401 5634 1.954382 GGACCGGCCCATATCTTTTTC 59.046 52.381 0.00 0.00 0.00 2.29
4409 5642 4.440112 GGCCCATATCTTTTTCTTCCGTTG 60.440 45.833 0.00 0.00 0.00 4.10
4428 5661 1.010419 GCAACGCATGAGCCCTTTTG 61.010 55.000 0.00 0.00 37.52 2.44
4439 5686 3.181469 TGAGCCCTTTTGCTAGTATACGG 60.181 47.826 0.00 0.00 42.95 4.02
4452 5699 5.353678 GCTAGTATACGGTCCCAGTGTATAG 59.646 48.000 0.00 0.00 33.14 1.31
4491 5738 1.134371 ACCGGACTAGTACGTACTCCC 60.134 57.143 30.53 25.37 37.73 4.30
4493 5740 2.420687 CCGGACTAGTACGTACTCCCTT 60.421 54.545 30.53 13.81 37.73 3.95
4495 5742 4.442706 CGGACTAGTACGTACTCCCTTTA 58.557 47.826 30.53 12.11 37.73 1.85
4497 5744 5.529060 CGGACTAGTACGTACTCCCTTTATT 59.471 44.000 30.53 7.46 37.73 1.40
4498 5745 6.293135 CGGACTAGTACGTACTCCCTTTATTC 60.293 46.154 30.53 15.28 37.73 1.75
4499 5746 6.016693 GGACTAGTACGTACTCCCTTTATTCC 60.017 46.154 30.53 19.72 37.73 3.01
4500 5747 6.426587 ACTAGTACGTACTCCCTTTATTCCA 58.573 40.000 30.53 8.71 37.73 3.53
4501 5748 6.891908 ACTAGTACGTACTCCCTTTATTCCAA 59.108 38.462 30.53 8.51 37.73 3.53
4513 5760 8.950007 TCCCTTTATTCCAAAATATATGACCC 57.050 34.615 0.00 0.00 0.00 4.46
4514 5761 8.515351 TCCCTTTATTCCAAAATATATGACCCA 58.485 33.333 0.00 0.00 0.00 4.51
4515 5762 9.153479 CCCTTTATTCCAAAATATATGACCCAA 57.847 33.333 0.00 0.00 0.00 4.12
4516 5763 9.981114 CCTTTATTCCAAAATATATGACCCAAC 57.019 33.333 0.00 0.00 0.00 3.77
4521 5768 8.429237 TTCCAAAATATATGACCCAACTTTGT 57.571 30.769 0.00 0.00 0.00 2.83
4532 5779 8.927675 ATGACCCAACTTTGTACTAAAATACA 57.072 30.769 0.00 0.00 33.18 2.29
4533 5780 8.385898 TGACCCAACTTTGTACTAAAATACAG 57.614 34.615 0.00 0.00 36.45 2.74
4535 5782 9.492973 GACCCAACTTTGTACTAAAATACAGTA 57.507 33.333 0.00 0.00 36.45 2.74
4587 5850 3.429960 GGGAGTACTAGTTAACCCGCAAG 60.430 52.174 0.00 0.00 0.00 4.01
4617 5880 2.334946 GCCGGACTCAGCATGCAAA 61.335 57.895 21.98 6.13 34.76 3.68
4647 5910 2.266279 GGATACCTAGGGCTAATGGCA 58.734 52.381 14.81 0.00 44.01 4.92
4653 5916 4.559502 GGGCTAATGGCACGACAT 57.440 55.556 0.00 0.00 44.01 3.06
4698 5961 9.436957 ACTAATTTGGTTATCTCTAACACTGTG 57.563 33.333 6.19 6.19 39.23 3.66
4699 5962 9.436957 CTAATTTGGTTATCTCTAACACTGTGT 57.563 33.333 7.80 7.80 39.23 3.72
4701 5964 8.773404 ATTTGGTTATCTCTAACACTGTGTAC 57.227 34.615 14.69 5.80 39.23 2.90
4702 5965 7.534723 TTGGTTATCTCTAACACTGTGTACT 57.465 36.000 14.69 1.83 39.23 2.73
4703 5966 7.154435 TGGTTATCTCTAACACTGTGTACTC 57.846 40.000 14.69 1.76 39.23 2.59
4704 5967 6.946583 TGGTTATCTCTAACACTGTGTACTCT 59.053 38.462 14.69 0.64 39.23 3.24
4705 5968 8.105197 TGGTTATCTCTAACACTGTGTACTCTA 58.895 37.037 14.69 1.91 39.23 2.43
4706 5969 8.397148 GGTTATCTCTAACACTGTGTACTCTAC 58.603 40.741 14.69 5.53 39.23 2.59
4707 5970 8.944029 GTTATCTCTAACACTGTGTACTCTACA 58.056 37.037 14.69 0.00 37.70 2.74
4708 5971 7.997773 ATCTCTAACACTGTGTACTCTACAA 57.002 36.000 14.69 0.00 40.93 2.41
4709 5972 7.199541 TCTCTAACACTGTGTACTCTACAAC 57.800 40.000 14.69 0.00 40.93 3.32
4710 5973 6.996879 TCTCTAACACTGTGTACTCTACAACT 59.003 38.462 14.69 0.00 40.93 3.16
4711 5974 7.172875 TCTCTAACACTGTGTACTCTACAACTC 59.827 40.741 14.69 0.00 40.93 3.01
4712 5975 5.847111 AACACTGTGTACTCTACAACTCA 57.153 39.130 14.69 0.00 40.93 3.41
4713 5976 5.184340 ACACTGTGTACTCTACAACTCAC 57.816 43.478 12.53 0.00 40.93 3.51
4714 5977 4.888239 ACACTGTGTACTCTACAACTCACT 59.112 41.667 12.53 0.00 40.93 3.41
4715 5978 5.215903 CACTGTGTACTCTACAACTCACTG 58.784 45.833 0.00 0.00 40.93 3.66
4716 5979 4.888239 ACTGTGTACTCTACAACTCACTGT 59.112 41.667 0.00 0.00 40.93 3.55
4717 5980 5.183014 TGTGTACTCTACAACTCACTGTG 57.817 43.478 0.17 0.17 40.93 3.66
4718 5981 4.643334 TGTGTACTCTACAACTCACTGTGT 59.357 41.667 7.79 0.00 40.93 3.72
4719 5982 5.824097 TGTGTACTCTACAACTCACTGTGTA 59.176 40.000 7.79 0.00 40.93 2.90
4720 5983 6.141462 GTGTACTCTACAACTCACTGTGTAC 58.859 44.000 7.79 0.00 40.93 2.90
4721 5984 4.485024 ACTCTACAACTCACTGTGTACG 57.515 45.455 7.79 0.77 0.00 3.67
4722 5985 3.235195 CTCTACAACTCACTGTGTACGC 58.765 50.000 7.79 0.00 0.00 4.42
4723 5986 2.882761 TCTACAACTCACTGTGTACGCT 59.117 45.455 8.10 0.00 0.00 5.07
4724 5987 4.067192 TCTACAACTCACTGTGTACGCTA 58.933 43.478 8.10 0.00 0.00 4.26
4725 5988 3.009301 ACAACTCACTGTGTACGCTAC 57.991 47.619 8.10 0.00 0.00 3.58
4726 5989 2.359848 ACAACTCACTGTGTACGCTACA 59.640 45.455 8.10 0.00 36.08 2.74
4727 5990 3.181484 ACAACTCACTGTGTACGCTACAA 60.181 43.478 8.10 0.00 40.93 2.41
4728 5991 3.009301 ACTCACTGTGTACGCTACAAC 57.991 47.619 8.10 0.00 40.93 3.32
4729 5992 2.359848 ACTCACTGTGTACGCTACAACA 59.640 45.455 8.10 0.00 40.93 3.33
4730 5993 2.980476 CTCACTGTGTACGCTACAACAG 59.020 50.000 8.10 7.53 40.93 3.16
4731 5994 2.619646 TCACTGTGTACGCTACAACAGA 59.380 45.455 13.86 0.00 40.93 3.41
4732 5995 3.067040 TCACTGTGTACGCTACAACAGAA 59.933 43.478 13.86 1.72 40.93 3.02
4733 5996 3.181774 CACTGTGTACGCTACAACAGAAC 59.818 47.826 13.86 0.00 40.93 3.01
4734 5997 2.729882 CTGTGTACGCTACAACAGAACC 59.270 50.000 8.10 0.88 40.93 3.62
4735 5998 2.101082 TGTGTACGCTACAACAGAACCA 59.899 45.455 8.10 0.00 40.93 3.67
4736 5999 3.243941 TGTGTACGCTACAACAGAACCAT 60.244 43.478 8.10 0.00 40.93 3.55
4737 6000 3.122948 GTGTACGCTACAACAGAACCATG 59.877 47.826 0.00 0.00 40.93 3.66
4738 6001 1.156736 ACGCTACAACAGAACCATGC 58.843 50.000 0.00 0.00 0.00 4.06
4739 6002 0.447801 CGCTACAACAGAACCATGCC 59.552 55.000 0.00 0.00 0.00 4.40
4740 6003 1.533625 GCTACAACAGAACCATGCCA 58.466 50.000 0.00 0.00 0.00 4.92
4741 6004 1.885887 GCTACAACAGAACCATGCCAA 59.114 47.619 0.00 0.00 0.00 4.52
4742 6005 2.095059 GCTACAACAGAACCATGCCAAG 60.095 50.000 0.00 0.00 0.00 3.61
4743 6006 1.331214 ACAACAGAACCATGCCAAGG 58.669 50.000 0.00 0.00 0.00 3.61
4744 6007 0.604578 CAACAGAACCATGCCAAGGG 59.395 55.000 0.00 0.00 0.00 3.95
4745 6008 0.482446 AACAGAACCATGCCAAGGGA 59.518 50.000 0.00 0.00 0.00 4.20
4746 6009 0.482446 ACAGAACCATGCCAAGGGAA 59.518 50.000 0.00 0.00 0.00 3.97
4747 6010 1.180029 CAGAACCATGCCAAGGGAAG 58.820 55.000 0.00 0.00 0.00 3.46
4748 6011 0.040204 AGAACCATGCCAAGGGAAGG 59.960 55.000 0.00 0.00 0.00 3.46
4749 6012 0.972471 GAACCATGCCAAGGGAAGGG 60.972 60.000 6.82 0.00 0.00 3.95
4750 6013 1.442886 AACCATGCCAAGGGAAGGGA 61.443 55.000 0.00 0.00 0.00 4.20
4751 6014 1.380380 CCATGCCAAGGGAAGGGAC 60.380 63.158 0.00 0.00 0.00 4.46
4752 6015 1.383799 CATGCCAAGGGAAGGGACA 59.616 57.895 0.00 0.00 0.00 4.02
4753 6016 0.251742 CATGCCAAGGGAAGGGACAA 60.252 55.000 0.00 0.00 0.00 3.18
4754 6017 0.486879 ATGCCAAGGGAAGGGACAAA 59.513 50.000 0.00 0.00 0.00 2.83
4755 6018 0.178964 TGCCAAGGGAAGGGACAAAG 60.179 55.000 0.00 0.00 0.00 2.77
4756 6019 0.178961 GCCAAGGGAAGGGACAAAGT 60.179 55.000 0.00 0.00 0.00 2.66
4757 6020 1.620822 CCAAGGGAAGGGACAAAGTG 58.379 55.000 0.00 0.00 0.00 3.16
4758 6021 1.620822 CAAGGGAAGGGACAAAGTGG 58.379 55.000 0.00 0.00 0.00 4.00
4759 6022 1.144913 CAAGGGAAGGGACAAAGTGGA 59.855 52.381 0.00 0.00 0.00 4.02
4760 6023 0.771755 AGGGAAGGGACAAAGTGGAC 59.228 55.000 0.00 0.00 0.00 4.02
4761 6024 0.476771 GGGAAGGGACAAAGTGGACA 59.523 55.000 0.00 0.00 0.00 4.02
4762 6025 1.133606 GGGAAGGGACAAAGTGGACAA 60.134 52.381 0.00 0.00 0.00 3.18
4763 6026 1.954382 GGAAGGGACAAAGTGGACAAC 59.046 52.381 0.00 0.00 0.00 3.32
4764 6027 2.650322 GAAGGGACAAAGTGGACAACA 58.350 47.619 0.00 0.00 0.00 3.33
4765 6028 2.818751 AGGGACAAAGTGGACAACAA 57.181 45.000 0.00 0.00 0.00 2.83
4766 6029 3.094484 AGGGACAAAGTGGACAACAAA 57.906 42.857 0.00 0.00 0.00 2.83
4767 6030 3.642141 AGGGACAAAGTGGACAACAAAT 58.358 40.909 0.00 0.00 0.00 2.32
4768 6031 3.636764 AGGGACAAAGTGGACAACAAATC 59.363 43.478 0.00 0.00 0.00 2.17
4769 6032 3.550030 GGGACAAAGTGGACAACAAATCG 60.550 47.826 0.00 0.00 0.00 3.34
4770 6033 3.042887 GACAAAGTGGACAACAAATCGC 58.957 45.455 0.00 0.00 0.00 4.58
4771 6034 2.425312 ACAAAGTGGACAACAAATCGCA 59.575 40.909 0.00 0.00 0.00 5.10
4772 6035 3.068024 ACAAAGTGGACAACAAATCGCAT 59.932 39.130 0.00 0.00 0.00 4.73
4773 6036 2.995466 AGTGGACAACAAATCGCATG 57.005 45.000 0.00 0.00 0.00 4.06
4774 6037 2.503331 AGTGGACAACAAATCGCATGA 58.497 42.857 0.00 0.00 0.00 3.07
4775 6038 2.884012 AGTGGACAACAAATCGCATGAA 59.116 40.909 0.00 0.00 0.00 2.57
4776 6039 3.507233 AGTGGACAACAAATCGCATGAAT 59.493 39.130 0.00 0.00 0.00 2.57
4777 6040 4.699735 AGTGGACAACAAATCGCATGAATA 59.300 37.500 0.00 0.00 0.00 1.75
4778 6041 5.357878 AGTGGACAACAAATCGCATGAATAT 59.642 36.000 0.00 0.00 0.00 1.28
4779 6042 6.542005 AGTGGACAACAAATCGCATGAATATA 59.458 34.615 0.00 0.00 0.00 0.86
4780 6043 7.229306 AGTGGACAACAAATCGCATGAATATAT 59.771 33.333 0.00 0.00 0.00 0.86
4781 6044 8.503196 GTGGACAACAAATCGCATGAATATATA 58.497 33.333 0.00 0.00 0.00 0.86
4782 6045 8.720562 TGGACAACAAATCGCATGAATATATAG 58.279 33.333 0.00 0.00 0.00 1.31
4783 6046 8.177663 GGACAACAAATCGCATGAATATATAGG 58.822 37.037 0.00 0.00 0.00 2.57
4784 6047 8.846943 ACAACAAATCGCATGAATATATAGGA 57.153 30.769 0.00 0.00 0.00 2.94
4785 6048 9.283768 ACAACAAATCGCATGAATATATAGGAA 57.716 29.630 0.00 0.00 0.00 3.36
4792 6055 8.492673 TCGCATGAATATATAGGAATTTCACC 57.507 34.615 0.00 0.00 0.00 4.02
4793 6056 8.100164 TCGCATGAATATATAGGAATTTCACCA 58.900 33.333 0.00 0.00 0.00 4.17
4794 6057 8.896744 CGCATGAATATATAGGAATTTCACCAT 58.103 33.333 0.00 0.00 0.00 3.55
4802 6065 8.990163 ATATAGGAATTTCACCATAAACGGTT 57.010 30.769 0.00 0.00 37.07 4.44
4803 6066 5.638596 AGGAATTTCACCATAAACGGTTC 57.361 39.130 0.00 0.00 37.07 3.62
4804 6067 5.074115 AGGAATTTCACCATAAACGGTTCA 58.926 37.500 0.00 0.00 37.07 3.18
4805 6068 5.183140 AGGAATTTCACCATAAACGGTTCAG 59.817 40.000 0.00 0.00 37.07 3.02
4806 6069 5.048294 GGAATTTCACCATAAACGGTTCAGT 60.048 40.000 0.00 0.00 37.07 3.41
4807 6070 6.399639 AATTTCACCATAAACGGTTCAGTT 57.600 33.333 0.00 0.00 37.07 3.16
4808 6071 7.308710 GGAATTTCACCATAAACGGTTCAGTTA 60.309 37.037 0.00 0.00 37.07 2.24
4809 6072 6.939132 TTTCACCATAAACGGTTCAGTTAA 57.061 33.333 0.00 0.00 37.07 2.01
4810 6073 6.939132 TTCACCATAAACGGTTCAGTTAAA 57.061 33.333 0.00 0.00 37.07 1.52
4811 6074 7.513371 TTCACCATAAACGGTTCAGTTAAAT 57.487 32.000 0.00 0.00 37.07 1.40
4812 6075 7.513371 TCACCATAAACGGTTCAGTTAAATT 57.487 32.000 0.00 0.00 37.07 1.82
4813 6076 7.942990 TCACCATAAACGGTTCAGTTAAATTT 58.057 30.769 0.00 0.00 37.07 1.82
4814 6077 8.414778 TCACCATAAACGGTTCAGTTAAATTTT 58.585 29.630 0.00 0.00 37.07 1.82
4815 6078 8.696175 CACCATAAACGGTTCAGTTAAATTTTC 58.304 33.333 0.00 0.00 37.07 2.29
4816 6079 8.635328 ACCATAAACGGTTCAGTTAAATTTTCT 58.365 29.630 0.00 0.00 34.91 2.52
4817 6080 8.911662 CCATAAACGGTTCAGTTAAATTTTCTG 58.088 33.333 13.43 13.43 33.41 3.02
4818 6081 8.911662 CATAAACGGTTCAGTTAAATTTTCTGG 58.088 33.333 17.13 8.33 33.41 3.86
4819 6082 6.702716 AACGGTTCAGTTAAATTTTCTGGA 57.297 33.333 17.13 10.08 31.74 3.86
4820 6083 6.313744 ACGGTTCAGTTAAATTTTCTGGAG 57.686 37.500 17.13 11.28 0.00 3.86
4821 6084 6.059484 ACGGTTCAGTTAAATTTTCTGGAGA 58.941 36.000 17.13 6.80 0.00 3.71
4822 6085 6.544564 ACGGTTCAGTTAAATTTTCTGGAGAA 59.455 34.615 17.13 7.12 0.00 2.87
4823 6086 7.230712 ACGGTTCAGTTAAATTTTCTGGAGAAT 59.769 33.333 17.13 4.82 33.54 2.40
4824 6087 8.082242 CGGTTCAGTTAAATTTTCTGGAGAATT 58.918 33.333 17.13 0.00 33.54 2.17
4825 6088 9.411801 GGTTCAGTTAAATTTTCTGGAGAATTC 57.588 33.333 17.13 0.00 33.54 2.17
4826 6089 9.411801 GTTCAGTTAAATTTTCTGGAGAATTCC 57.588 33.333 17.13 0.00 44.31 3.01
4827 6090 8.122472 TCAGTTAAATTTTCTGGAGAATTCCC 57.878 34.615 17.13 3.96 43.33 3.97
4828 6091 7.178451 TCAGTTAAATTTTCTGGAGAATTCCCC 59.822 37.037 17.13 0.00 43.33 4.81
4829 6092 6.152831 AGTTAAATTTTCTGGAGAATTCCCCG 59.847 38.462 0.65 0.26 43.33 5.73
4830 6093 1.834188 TTTTCTGGAGAATTCCCCGC 58.166 50.000 0.65 0.00 43.33 6.13
4831 6094 0.392461 TTTCTGGAGAATTCCCCGCG 60.392 55.000 0.00 0.00 43.33 6.46
4832 6095 1.261938 TTCTGGAGAATTCCCCGCGA 61.262 55.000 8.23 0.00 43.33 5.87
4833 6096 1.220749 CTGGAGAATTCCCCGCGAA 59.779 57.895 8.23 0.00 43.33 4.70
4834 6097 0.811616 CTGGAGAATTCCCCGCGAAG 60.812 60.000 8.23 0.00 43.33 3.79
4835 6098 2.180862 GGAGAATTCCCCGCGAAGC 61.181 63.158 8.23 0.00 44.35 3.86
4836 6099 2.595009 GGAGAATTCCCCGCGAAGCT 62.595 60.000 8.23 0.00 45.20 3.74
4848 6111 2.559785 CGAAGCTTTGATGCCCTGT 58.440 52.632 8.08 0.00 0.00 4.00
4849 6112 0.883833 CGAAGCTTTGATGCCCTGTT 59.116 50.000 8.08 0.00 0.00 3.16
4850 6113 1.401931 CGAAGCTTTGATGCCCTGTTG 60.402 52.381 8.08 0.00 0.00 3.33
4851 6114 0.971386 AAGCTTTGATGCCCTGTTGG 59.029 50.000 0.00 0.00 37.09 3.77
4852 6115 0.178953 AGCTTTGATGCCCTGTTGGT 60.179 50.000 0.00 0.00 36.04 3.67
4853 6116 0.681175 GCTTTGATGCCCTGTTGGTT 59.319 50.000 0.00 0.00 36.04 3.67
4854 6117 1.337167 GCTTTGATGCCCTGTTGGTTC 60.337 52.381 0.00 0.00 36.04 3.62
4855 6118 2.242043 CTTTGATGCCCTGTTGGTTCT 58.758 47.619 0.00 0.00 36.04 3.01
4856 6119 2.380064 TTGATGCCCTGTTGGTTCTT 57.620 45.000 0.00 0.00 36.04 2.52
4857 6120 1.909700 TGATGCCCTGTTGGTTCTTC 58.090 50.000 0.00 0.00 36.04 2.87
4858 6121 1.177401 GATGCCCTGTTGGTTCTTCC 58.823 55.000 0.00 0.00 36.04 3.46
4859 6122 0.251787 ATGCCCTGTTGGTTCTTCCC 60.252 55.000 0.00 0.00 36.04 3.97
4860 6123 1.152830 GCCCTGTTGGTTCTTCCCA 59.847 57.895 0.00 0.00 36.04 4.37
4861 6124 0.895559 GCCCTGTTGGTTCTTCCCAG 60.896 60.000 0.00 0.00 35.49 4.45
4862 6125 0.478507 CCCTGTTGGTTCTTCCCAGT 59.521 55.000 0.00 0.00 35.49 4.00
4863 6126 1.609208 CCTGTTGGTTCTTCCCAGTG 58.391 55.000 0.00 0.00 35.49 3.66
4864 6127 1.133792 CCTGTTGGTTCTTCCCAGTGT 60.134 52.381 0.00 0.00 35.49 3.55
4865 6128 2.654863 CTGTTGGTTCTTCCCAGTGTT 58.345 47.619 0.00 0.00 35.49 3.32
4866 6129 3.434453 CCTGTTGGTTCTTCCCAGTGTTA 60.434 47.826 0.00 0.00 35.49 2.41
4867 6130 3.815401 CTGTTGGTTCTTCCCAGTGTTAG 59.185 47.826 0.00 0.00 35.49 2.34
4868 6131 3.146847 GTTGGTTCTTCCCAGTGTTAGG 58.853 50.000 0.00 0.00 35.49 2.69
4869 6132 1.073284 TGGTTCTTCCCAGTGTTAGGC 59.927 52.381 0.00 0.00 34.77 3.93
4870 6133 1.351350 GGTTCTTCCCAGTGTTAGGCT 59.649 52.381 0.00 0.00 0.00 4.58
4871 6134 2.570302 GGTTCTTCCCAGTGTTAGGCTA 59.430 50.000 0.00 0.00 0.00 3.93
4872 6135 3.200165 GGTTCTTCCCAGTGTTAGGCTAT 59.800 47.826 0.00 0.00 0.00 2.97
4873 6136 4.192317 GTTCTTCCCAGTGTTAGGCTATG 58.808 47.826 0.00 0.00 0.00 2.23
4874 6137 2.771943 TCTTCCCAGTGTTAGGCTATGG 59.228 50.000 5.12 5.12 0.00 2.74
4875 6138 0.837272 TCCCAGTGTTAGGCTATGGC 59.163 55.000 6.40 0.00 37.82 4.40
4876 6139 0.532862 CCCAGTGTTAGGCTATGGCG 60.533 60.000 6.40 0.00 39.81 5.69
4877 6140 0.178068 CCAGTGTTAGGCTATGGCGT 59.822 55.000 0.89 0.89 39.81 5.68
4878 6141 1.406887 CCAGTGTTAGGCTATGGCGTT 60.407 52.381 0.36 0.00 39.81 4.84
4879 6142 1.665679 CAGTGTTAGGCTATGGCGTTG 59.334 52.381 0.36 0.00 39.81 4.10
4880 6143 0.377203 GTGTTAGGCTATGGCGTTGC 59.623 55.000 0.36 4.48 39.81 4.17
4881 6144 0.251916 TGTTAGGCTATGGCGTTGCT 59.748 50.000 12.65 2.41 39.81 3.91
4882 6145 1.483004 TGTTAGGCTATGGCGTTGCTA 59.517 47.619 12.65 1.54 39.81 3.49
4883 6146 2.093394 TGTTAGGCTATGGCGTTGCTAA 60.093 45.455 12.65 6.94 39.81 3.09
4884 6147 2.940410 GTTAGGCTATGGCGTTGCTAAA 59.060 45.455 12.65 5.13 39.81 1.85
4885 6148 1.668419 AGGCTATGGCGTTGCTAAAG 58.332 50.000 12.65 0.00 39.81 1.85
4886 6149 1.065418 AGGCTATGGCGTTGCTAAAGT 60.065 47.619 12.65 0.00 39.81 2.66
4887 6150 2.169769 AGGCTATGGCGTTGCTAAAGTA 59.830 45.455 12.65 0.00 39.81 2.24
4888 6151 2.544267 GGCTATGGCGTTGCTAAAGTAG 59.456 50.000 12.65 0.00 39.81 2.57
4889 6152 3.195661 GCTATGGCGTTGCTAAAGTAGT 58.804 45.455 5.87 0.00 0.00 2.73
4890 6153 3.621715 GCTATGGCGTTGCTAAAGTAGTT 59.378 43.478 5.87 0.00 0.00 2.24
4891 6154 4.094442 GCTATGGCGTTGCTAAAGTAGTTT 59.906 41.667 5.87 0.37 0.00 2.66
4892 6155 5.292589 GCTATGGCGTTGCTAAAGTAGTTTA 59.707 40.000 5.87 2.82 0.00 2.01
4893 6156 6.018180 GCTATGGCGTTGCTAAAGTAGTTTAT 60.018 38.462 5.87 0.00 0.00 1.40
4894 6157 5.539582 TGGCGTTGCTAAAGTAGTTTATG 57.460 39.130 3.23 0.49 0.00 1.90
4895 6158 4.142773 TGGCGTTGCTAAAGTAGTTTATGC 60.143 41.667 3.23 9.47 0.00 3.14
4896 6159 4.094442 GGCGTTGCTAAAGTAGTTTATGCT 59.906 41.667 17.66 0.00 0.00 3.79
4897 6160 5.292589 GGCGTTGCTAAAGTAGTTTATGCTA 59.707 40.000 17.66 11.77 0.00 3.49
4898 6161 6.018180 GGCGTTGCTAAAGTAGTTTATGCTAT 60.018 38.462 17.66 0.00 0.00 2.97
4899 6162 6.846283 GCGTTGCTAAAGTAGTTTATGCTATG 59.154 38.462 17.66 16.45 0.00 2.23
4900 6163 6.846283 CGTTGCTAAAGTAGTTTATGCTATGC 59.154 38.462 17.66 11.57 0.00 3.14
4901 6164 7.254455 CGTTGCTAAAGTAGTTTATGCTATGCT 60.254 37.037 17.66 0.00 0.00 3.79
4902 6165 9.042008 GTTGCTAAAGTAGTTTATGCTATGCTA 57.958 33.333 17.66 7.44 0.00 3.49
4903 6166 8.818141 TGCTAAAGTAGTTTATGCTATGCTAG 57.182 34.615 17.66 0.00 0.00 3.42
4904 6167 7.872993 TGCTAAAGTAGTTTATGCTATGCTAGG 59.127 37.037 17.66 1.87 0.00 3.02
4905 6168 7.148557 GCTAAAGTAGTTTATGCTATGCTAGGC 60.149 40.741 3.23 0.00 0.00 3.93
4906 6169 6.426646 AAGTAGTTTATGCTATGCTAGGCT 57.573 37.500 0.00 0.00 0.00 4.58
4907 6170 7.540474 AAGTAGTTTATGCTATGCTAGGCTA 57.460 36.000 0.00 0.00 0.00 3.93
4908 6171 7.726033 AGTAGTTTATGCTATGCTAGGCTAT 57.274 36.000 0.00 0.00 0.00 2.97
4909 6172 8.140112 AGTAGTTTATGCTATGCTAGGCTATT 57.860 34.615 0.00 0.00 0.00 1.73
4910 6173 8.254508 AGTAGTTTATGCTATGCTAGGCTATTC 58.745 37.037 0.00 0.00 0.00 1.75
4911 6174 7.251321 AGTTTATGCTATGCTAGGCTATTCT 57.749 36.000 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 0.884259 CCACCATGTGCGTGAACTCA 60.884 55.000 2.52 0.00 32.77 3.41
120 121 1.887198 TCTTCGTCTTGACCTCCAGAC 59.113 52.381 0.00 0.00 0.00 3.51
134 135 5.947228 TTTCTTCATGAATTGCTCTTCGT 57.053 34.783 8.96 0.00 34.24 3.85
178 179 3.199880 ACGCCTTGATAAAGAGATGGG 57.800 47.619 0.00 0.00 0.00 4.00
283 284 1.534476 TTCACGTACTCCTGGGGCA 60.534 57.895 0.00 0.00 0.00 5.36
369 370 2.820178 AGCCCCGAGAAAAATTCCATT 58.180 42.857 0.00 0.00 0.00 3.16
419 421 4.702131 GCCATAGCTTCCAATATAACAGGG 59.298 45.833 0.00 0.00 35.50 4.45
446 448 0.593618 CGATTGCTAGCGCCTCTCTA 59.406 55.000 10.77 0.00 34.43 2.43
498 500 2.930040 CAACTATCTTGCAATCCGACGT 59.070 45.455 0.00 0.00 0.00 4.34
567 569 7.389232 TGTGATCGCTCTATAATTTCATGGAT 58.611 34.615 7.94 0.00 0.00 3.41
568 570 6.758254 TGTGATCGCTCTATAATTTCATGGA 58.242 36.000 7.94 0.00 0.00 3.41
569 571 7.606858 ATGTGATCGCTCTATAATTTCATGG 57.393 36.000 7.94 0.00 0.00 3.66
650 653 1.153568 GTGCATGCCTAGCGAGACA 60.154 57.895 16.68 0.00 33.85 3.41
696 699 1.972588 ATCCCTGGGCAGACTTAACT 58.027 50.000 8.22 0.00 0.00 2.24
701 704 1.075601 TTCAAATCCCTGGGCAGACT 58.924 50.000 8.22 0.00 0.00 3.24
784 787 8.458843 CAGGACTCTTTTTCTTTTAACTCACAA 58.541 33.333 0.00 0.00 0.00 3.33
785 788 7.827236 TCAGGACTCTTTTTCTTTTAACTCACA 59.173 33.333 0.00 0.00 0.00 3.58
786 789 8.209917 TCAGGACTCTTTTTCTTTTAACTCAC 57.790 34.615 0.00 0.00 0.00 3.51
787 790 8.801882 TTCAGGACTCTTTTTCTTTTAACTCA 57.198 30.769 0.00 0.00 0.00 3.41
794 797 9.408648 TGAGTATTTTCAGGACTCTTTTTCTTT 57.591 29.630 3.21 0.00 40.26 2.52
795 798 8.980481 TGAGTATTTTCAGGACTCTTTTTCTT 57.020 30.769 3.21 0.00 40.26 2.52
796 799 8.980481 TTGAGTATTTTCAGGACTCTTTTTCT 57.020 30.769 3.21 0.00 40.26 2.52
797 800 9.833182 GATTGAGTATTTTCAGGACTCTTTTTC 57.167 33.333 3.21 0.00 40.26 2.29
798 801 8.797438 GGATTGAGTATTTTCAGGACTCTTTTT 58.203 33.333 3.21 0.00 40.26 1.94
799 802 7.394641 GGGATTGAGTATTTTCAGGACTCTTTT 59.605 37.037 3.21 0.00 40.26 2.27
800 803 6.887002 GGGATTGAGTATTTTCAGGACTCTTT 59.113 38.462 3.21 0.00 40.26 2.52
801 804 6.418946 GGGATTGAGTATTTTCAGGACTCTT 58.581 40.000 3.21 0.00 40.26 2.85
802 805 5.104318 GGGGATTGAGTATTTTCAGGACTCT 60.104 44.000 3.21 0.00 40.26 3.24
803 806 5.126779 GGGGATTGAGTATTTTCAGGACTC 58.873 45.833 0.00 0.00 40.07 3.36
804 807 4.540099 TGGGGATTGAGTATTTTCAGGACT 59.460 41.667 0.00 0.00 0.00 3.85
805 808 4.855340 TGGGGATTGAGTATTTTCAGGAC 58.145 43.478 0.00 0.00 0.00 3.85
806 809 4.628715 GCTGGGGATTGAGTATTTTCAGGA 60.629 45.833 0.00 0.00 0.00 3.86
807 810 3.633986 GCTGGGGATTGAGTATTTTCAGG 59.366 47.826 0.00 0.00 0.00 3.86
808 811 3.633986 GGCTGGGGATTGAGTATTTTCAG 59.366 47.826 0.00 0.00 0.00 3.02
809 812 3.631250 GGCTGGGGATTGAGTATTTTCA 58.369 45.455 0.00 0.00 0.00 2.69
810 813 2.618709 CGGCTGGGGATTGAGTATTTTC 59.381 50.000 0.00 0.00 0.00 2.29
811 814 2.025321 ACGGCTGGGGATTGAGTATTTT 60.025 45.455 0.00 0.00 0.00 1.82
812 815 1.564348 ACGGCTGGGGATTGAGTATTT 59.436 47.619 0.00 0.00 0.00 1.40
813 816 1.141053 GACGGCTGGGGATTGAGTATT 59.859 52.381 0.00 0.00 0.00 1.89
814 817 0.759346 GACGGCTGGGGATTGAGTAT 59.241 55.000 0.00 0.00 0.00 2.12
815 818 1.672854 CGACGGCTGGGGATTGAGTA 61.673 60.000 0.00 0.00 0.00 2.59
816 819 2.990479 GACGGCTGGGGATTGAGT 59.010 61.111 0.00 0.00 0.00 3.41
817 820 2.202932 CGACGGCTGGGGATTGAG 60.203 66.667 0.00 0.00 0.00 3.02
818 821 3.000819 ACGACGGCTGGGGATTGA 61.001 61.111 0.00 0.00 0.00 2.57
819 822 1.672854 TAGACGACGGCTGGGGATTG 61.673 60.000 15.07 0.00 0.00 2.67
820 823 0.974010 TTAGACGACGGCTGGGGATT 60.974 55.000 15.07 0.00 0.00 3.01
821 824 0.759436 ATTAGACGACGGCTGGGGAT 60.759 55.000 15.07 0.00 0.00 3.85
822 825 1.380785 ATTAGACGACGGCTGGGGA 60.381 57.895 15.07 0.00 0.00 4.81
823 826 1.227263 CATTAGACGACGGCTGGGG 60.227 63.158 15.07 0.00 0.00 4.96
824 827 1.227263 CCATTAGACGACGGCTGGG 60.227 63.158 15.07 8.54 0.00 4.45
825 828 1.227263 CCCATTAGACGACGGCTGG 60.227 63.158 15.07 7.02 0.00 4.85
826 829 0.174845 TTCCCATTAGACGACGGCTG 59.825 55.000 15.07 0.00 0.00 4.85
827 830 0.460311 CTTCCCATTAGACGACGGCT 59.540 55.000 8.97 8.97 0.00 5.52
828 831 0.458669 TCTTCCCATTAGACGACGGC 59.541 55.000 0.00 0.00 0.00 5.68
829 832 3.123804 CAATCTTCCCATTAGACGACGG 58.876 50.000 0.00 0.00 0.00 4.79
830 833 2.540101 GCAATCTTCCCATTAGACGACG 59.460 50.000 0.00 0.00 0.00 5.12
831 834 3.531538 TGCAATCTTCCCATTAGACGAC 58.468 45.455 0.00 0.00 0.00 4.34
832 835 3.904800 TGCAATCTTCCCATTAGACGA 57.095 42.857 0.00 0.00 0.00 4.20
833 836 5.505173 AATTGCAATCTTCCCATTAGACG 57.495 39.130 13.38 0.00 0.00 4.18
834 837 7.285401 TCCTTAATTGCAATCTTCCCATTAGAC 59.715 37.037 13.38 0.00 0.00 2.59
835 838 7.353525 TCCTTAATTGCAATCTTCCCATTAGA 58.646 34.615 13.38 0.00 0.00 2.10
836 839 7.587037 TCCTTAATTGCAATCTTCCCATTAG 57.413 36.000 13.38 0.00 0.00 1.73
837 840 7.619302 ACTTCCTTAATTGCAATCTTCCCATTA 59.381 33.333 13.38 0.00 0.00 1.90
838 841 6.441604 ACTTCCTTAATTGCAATCTTCCCATT 59.558 34.615 13.38 0.00 0.00 3.16
839 842 5.960202 ACTTCCTTAATTGCAATCTTCCCAT 59.040 36.000 13.38 0.00 0.00 4.00
840 843 5.332743 ACTTCCTTAATTGCAATCTTCCCA 58.667 37.500 13.38 0.00 0.00 4.37
841 844 5.921962 ACTTCCTTAATTGCAATCTTCCC 57.078 39.130 13.38 0.00 0.00 3.97
842 845 7.631717 ACTACTTCCTTAATTGCAATCTTCC 57.368 36.000 13.38 0.00 0.00 3.46
879 882 9.461734 ACAAGTATATATAAGAGGGAAGGGTTT 57.538 33.333 0.00 0.00 0.00 3.27
906 909 8.866093 ACGGCTGGGCTTTTATTTTAATATAAT 58.134 29.630 0.00 0.00 0.00 1.28
907 910 8.240267 ACGGCTGGGCTTTTATTTTAATATAA 57.760 30.769 0.00 0.00 0.00 0.98
908 911 7.308109 CGACGGCTGGGCTTTTATTTTAATATA 60.308 37.037 0.00 0.00 0.00 0.86
909 912 6.514376 CGACGGCTGGGCTTTTATTTTAATAT 60.514 38.462 0.00 0.00 0.00 1.28
910 913 5.220892 CGACGGCTGGGCTTTTATTTTAATA 60.221 40.000 0.00 0.00 0.00 0.98
911 914 4.439563 CGACGGCTGGGCTTTTATTTTAAT 60.440 41.667 0.00 0.00 0.00 1.40
912 915 3.119779 CGACGGCTGGGCTTTTATTTTAA 60.120 43.478 0.00 0.00 0.00 1.52
913 916 2.420722 CGACGGCTGGGCTTTTATTTTA 59.579 45.455 0.00 0.00 0.00 1.52
914 917 1.201414 CGACGGCTGGGCTTTTATTTT 59.799 47.619 0.00 0.00 0.00 1.82
915 918 0.808755 CGACGGCTGGGCTTTTATTT 59.191 50.000 0.00 0.00 0.00 1.40
916 919 0.322187 ACGACGGCTGGGCTTTTATT 60.322 50.000 0.00 0.00 0.00 1.40
1059 1094 3.976490 TAGGAGACCGGGGCTGGTG 62.976 68.421 7.42 0.00 44.01 4.17
1061 1096 3.155167 GTAGGAGACCGGGGCTGG 61.155 72.222 7.42 0.00 0.00 4.85
1062 1097 3.528370 CGTAGGAGACCGGGGCTG 61.528 72.222 7.42 0.00 0.00 4.85
1453 1534 7.883229 AGAGAAGAGAAGAAATCGAAAAGAC 57.117 36.000 0.00 0.00 0.00 3.01
1482 1563 5.955850 ATTCCAATCCCAATCCTAATCCT 57.044 39.130 0.00 0.00 0.00 3.24
1484 1565 6.077322 TCCAATTCCAATCCCAATCCTAATC 58.923 40.000 0.00 0.00 0.00 1.75
1486 1567 5.480058 TCCAATTCCAATCCCAATCCTAA 57.520 39.130 0.00 0.00 0.00 2.69
1487 1568 5.103129 ACATCCAATTCCAATCCCAATCCTA 60.103 40.000 0.00 0.00 0.00 2.94
1488 1569 4.228824 CATCCAATTCCAATCCCAATCCT 58.771 43.478 0.00 0.00 0.00 3.24
1489 1570 3.969312 ACATCCAATTCCAATCCCAATCC 59.031 43.478 0.00 0.00 0.00 3.01
1490 1571 5.619132 AACATCCAATTCCAATCCCAATC 57.381 39.130 0.00 0.00 0.00 2.67
1491 1572 6.408434 GCTAAACATCCAATTCCAATCCCAAT 60.408 38.462 0.00 0.00 0.00 3.16
1492 1573 5.104982 GCTAAACATCCAATTCCAATCCCAA 60.105 40.000 0.00 0.00 0.00 4.12
1493 1574 4.405358 GCTAAACATCCAATTCCAATCCCA 59.595 41.667 0.00 0.00 0.00 4.37
1494 1575 4.651045 AGCTAAACATCCAATTCCAATCCC 59.349 41.667 0.00 0.00 0.00 3.85
1495 1576 5.859205 AGCTAAACATCCAATTCCAATCC 57.141 39.130 0.00 0.00 0.00 3.01
1496 1577 7.322664 TGAAAGCTAAACATCCAATTCCAATC 58.677 34.615 0.00 0.00 0.00 2.67
1497 1578 7.243604 TGAAAGCTAAACATCCAATTCCAAT 57.756 32.000 0.00 0.00 0.00 3.16
1498 1579 6.662865 TGAAAGCTAAACATCCAATTCCAA 57.337 33.333 0.00 0.00 0.00 3.53
1499 1580 6.662865 TTGAAAGCTAAACATCCAATTCCA 57.337 33.333 0.00 0.00 0.00 3.53
1500 1581 7.550712 AGATTGAAAGCTAAACATCCAATTCC 58.449 34.615 0.00 0.00 0.00 3.01
1501 1582 9.727627 CTAGATTGAAAGCTAAACATCCAATTC 57.272 33.333 0.00 0.00 0.00 2.17
1502 1583 8.689972 CCTAGATTGAAAGCTAAACATCCAATT 58.310 33.333 0.00 0.00 0.00 2.32
1503 1584 8.055181 TCCTAGATTGAAAGCTAAACATCCAAT 58.945 33.333 0.00 0.00 0.00 3.16
1504 1585 7.402054 TCCTAGATTGAAAGCTAAACATCCAA 58.598 34.615 0.00 0.00 0.00 3.53
1505 1586 6.957631 TCCTAGATTGAAAGCTAAACATCCA 58.042 36.000 0.00 0.00 0.00 3.41
1506 1587 7.865706 TTCCTAGATTGAAAGCTAAACATCC 57.134 36.000 0.00 0.00 0.00 3.51
1519 1600 8.108364 GCTACCTACCTACTATTCCTAGATTGA 58.892 40.741 0.00 0.00 0.00 2.57
1530 1611 9.689501 GAGAAATAGATGCTACCTACCTACTAT 57.310 37.037 0.00 0.00 0.00 2.12
1533 1614 6.654161 TCGAGAAATAGATGCTACCTACCTAC 59.346 42.308 0.00 0.00 0.00 3.18
1535 1616 5.632118 TCGAGAAATAGATGCTACCTACCT 58.368 41.667 0.00 0.00 0.00 3.08
1537 1618 8.082852 TCAATTCGAGAAATAGATGCTACCTAC 58.917 37.037 0.00 0.00 0.00 3.18
1540 1621 7.715265 TTCAATTCGAGAAATAGATGCTACC 57.285 36.000 0.00 0.00 0.00 3.18
1541 1622 9.202273 AGATTCAATTCGAGAAATAGATGCTAC 57.798 33.333 0.00 0.00 0.00 3.58
1568 1652 8.534496 CATCCAGTATCAGTATACATGGATTGA 58.466 37.037 17.52 0.00 44.12 2.57
1569 1653 7.767659 CCATCCAGTATCAGTATACATGGATTG 59.232 40.741 17.52 13.82 44.12 2.67
1577 1661 6.102663 GTGCATCCATCCAGTATCAGTATAC 58.897 44.000 0.00 0.00 38.64 1.47
1581 1665 2.773661 TGTGCATCCATCCAGTATCAGT 59.226 45.455 0.00 0.00 0.00 3.41
1582 1666 3.070590 TCTGTGCATCCATCCAGTATCAG 59.929 47.826 0.00 0.00 0.00 2.90
1586 1670 3.200605 ACAATCTGTGCATCCATCCAGTA 59.799 43.478 0.00 0.00 0.00 2.74
1587 1671 2.025605 ACAATCTGTGCATCCATCCAGT 60.026 45.455 0.00 0.00 0.00 4.00
1589 1673 2.646930 GACAATCTGTGCATCCATCCA 58.353 47.619 0.00 0.00 0.00 3.41
1590 1674 1.600957 CGACAATCTGTGCATCCATCC 59.399 52.381 0.00 0.00 0.00 3.51
1591 1675 2.286294 GTCGACAATCTGTGCATCCATC 59.714 50.000 11.55 0.00 0.00 3.51
1592 1676 2.283298 GTCGACAATCTGTGCATCCAT 58.717 47.619 11.55 0.00 0.00 3.41
1593 1677 1.675714 GGTCGACAATCTGTGCATCCA 60.676 52.381 18.91 0.00 0.00 3.41
1594 1678 1.009829 GGTCGACAATCTGTGCATCC 58.990 55.000 18.91 0.00 0.00 3.51
1595 1679 1.009829 GGGTCGACAATCTGTGCATC 58.990 55.000 18.91 0.00 0.00 3.91
1596 1680 0.392998 GGGGTCGACAATCTGTGCAT 60.393 55.000 18.91 0.00 0.00 3.96
1597 1681 1.003839 GGGGTCGACAATCTGTGCA 60.004 57.895 18.91 0.00 0.00 4.57
1598 1682 0.535335 TAGGGGTCGACAATCTGTGC 59.465 55.000 18.91 0.00 0.00 4.57
1599 1683 1.548719 TGTAGGGGTCGACAATCTGTG 59.451 52.381 18.91 0.00 0.00 3.66
1717 1801 0.038526 GCGTGTCCCTCTCTTCGAAA 60.039 55.000 0.00 0.00 0.00 3.46
1723 1807 0.827925 TGTTGAGCGTGTCCCTCTCT 60.828 55.000 0.00 0.00 0.00 3.10
1842 1939 3.434882 CCATCCAGACTAGAGAGCAGAGA 60.435 52.174 0.00 0.00 0.00 3.10
1843 1940 2.886523 CCATCCAGACTAGAGAGCAGAG 59.113 54.545 0.00 0.00 0.00 3.35
1844 1941 2.243478 ACCATCCAGACTAGAGAGCAGA 59.757 50.000 0.00 0.00 0.00 4.26
1845 1942 2.665165 ACCATCCAGACTAGAGAGCAG 58.335 52.381 0.00 0.00 0.00 4.24
1846 1943 2.836636 ACCATCCAGACTAGAGAGCA 57.163 50.000 0.00 0.00 0.00 4.26
1904 2019 2.894902 TGGGGAAACAAAAGAAAACGC 58.105 42.857 0.00 0.00 0.00 4.84
2059 2363 9.297586 TCGTGAAAGTGAACATATTAGTGATAC 57.702 33.333 0.00 0.00 0.00 2.24
2084 2389 6.964464 TGTCCCCTAGATAGATAGACAGATC 58.036 44.000 0.00 0.00 0.00 2.75
2152 2457 1.893335 TTTCTTGCGCTCTGCTGCA 60.893 52.632 9.73 0.88 46.63 4.41
2512 3073 5.414789 TGTCAACATAAGGTAGCTAGCAA 57.585 39.130 24.01 12.44 0.00 3.91
2517 3078 4.003648 GCACTTGTCAACATAAGGTAGCT 58.996 43.478 0.00 0.00 0.00 3.32
2576 3142 5.069648 TCATCAGTCAGGTAGCAGGATTTAG 59.930 44.000 0.00 0.00 0.00 1.85
2635 3227 1.001633 ACGGAGTTTGCCATACGACTT 59.998 47.619 0.00 0.00 37.78 3.01
2636 3228 0.606604 ACGGAGTTTGCCATACGACT 59.393 50.000 0.00 0.00 37.78 4.18
2637 3229 3.132863 ACGGAGTTTGCCATACGAC 57.867 52.632 0.00 0.00 37.78 4.34
2703 3299 6.405397 GCCAGAAGAGAACAAAACAAAACCTA 60.405 38.462 0.00 0.00 0.00 3.08
2861 3604 4.175962 TCTGGAAACTAAGAGGGGAACAT 58.824 43.478 0.00 0.00 0.00 2.71
2890 3633 9.791801 TGGATAAGAAAAGTATAATGCTATGCA 57.208 29.630 0.00 0.00 44.86 3.96
2908 3651 8.306313 AGTGTAGTATGTTCACATGGATAAGA 57.694 34.615 2.50 0.00 37.15 2.10
2966 3709 2.026449 CAGAAGGCAGAGGAACAGGATT 60.026 50.000 0.00 0.00 0.00 3.01
3001 3752 5.463286 TGTTGTATGCATGCTTTGAGAAAG 58.537 37.500 20.33 0.00 41.46 2.62
3007 3758 8.861033 AAGTATAATGTTGTATGCATGCTTTG 57.139 30.769 20.33 0.00 0.00 2.77
3036 3788 5.006746 GGAAGGATAGCGTGTTTCACAATAG 59.993 44.000 1.00 0.00 33.40 1.73
3090 3845 6.757897 CAGGACTTGCAATAACATAGGAAA 57.242 37.500 0.00 0.00 0.00 3.13
3123 3878 0.980423 GCAGAGGGGAGAACAGTTCT 59.020 55.000 16.11 16.11 44.21 3.01
3184 3939 2.571202 TCCATGAGGCGGCATTATCATA 59.429 45.455 13.08 0.00 31.35 2.15
3222 3977 5.419788 TGAGGAAAAATACATGCAAGCAGAT 59.580 36.000 0.00 0.00 0.00 2.90
3279 4258 9.893305 AATGTTTCAAGCAAGTAATAACAGTAC 57.107 29.630 0.00 0.00 0.00 2.73
3314 4296 5.793026 AATGTTTCAAGCTTTCGCAAAAA 57.207 30.435 0.00 0.00 39.10 1.94
3317 4299 3.555139 CCAAATGTTTCAAGCTTTCGCAA 59.445 39.130 0.00 0.00 39.10 4.85
3318 4300 3.122297 CCAAATGTTTCAAGCTTTCGCA 58.878 40.909 0.00 0.00 39.10 5.10
3319 4301 2.096762 GCCAAATGTTTCAAGCTTTCGC 60.097 45.455 0.00 0.00 0.00 4.70
3321 4303 6.619232 GCATAAGCCAAATGTTTCAAGCTTTC 60.619 38.462 0.00 0.00 40.73 2.62
3322 4304 5.179929 GCATAAGCCAAATGTTTCAAGCTTT 59.820 36.000 0.00 0.00 40.73 3.51
3323 4305 4.692155 GCATAAGCCAAATGTTTCAAGCTT 59.308 37.500 0.00 0.00 42.74 3.74
3324 4306 4.020839 AGCATAAGCCAAATGTTTCAAGCT 60.021 37.500 0.00 0.00 43.56 3.74
3326 4308 5.697633 ACAAGCATAAGCCAAATGTTTCAAG 59.302 36.000 0.00 0.00 43.56 3.02
3327 4309 5.609423 ACAAGCATAAGCCAAATGTTTCAA 58.391 33.333 0.00 0.00 43.56 2.69
3330 4312 5.367302 ACAACAAGCATAAGCCAAATGTTT 58.633 33.333 0.00 0.00 43.56 2.83
3331 4313 4.959723 ACAACAAGCATAAGCCAAATGTT 58.040 34.783 0.00 0.00 43.56 2.71
3332 4314 4.605640 ACAACAAGCATAAGCCAAATGT 57.394 36.364 0.00 0.00 43.56 2.71
3333 4315 5.927954 AAACAACAAGCATAAGCCAAATG 57.072 34.783 0.00 0.00 43.56 2.32
3602 4731 4.672587 TCAACAACTCACTGTTCTAGCT 57.327 40.909 0.00 0.00 37.43 3.32
3951 5138 3.824443 GTCTAGCTACTCATTCCTCCCTC 59.176 52.174 0.00 0.00 0.00 4.30
3964 5156 7.832187 ACCAATCTATCTATCCAGTCTAGCTAC 59.168 40.741 0.00 0.00 0.00 3.58
4072 5295 8.109634 ACCCATTCATATAGACAGACAAAAAGT 58.890 33.333 0.00 0.00 0.00 2.66
4156 5379 8.378421 CAAAAACTTGAGAAGAAAAGCTGAAAG 58.622 33.333 0.00 0.00 0.00 2.62
4303 5533 7.822822 TCAAATCTACAAGTTTCTTACTAGCCC 59.177 37.037 0.00 0.00 35.54 5.19
4383 5616 3.288092 GAAGAAAAAGATATGGGCCGGT 58.712 45.455 1.90 0.00 0.00 5.28
4409 5642 1.010419 CAAAAGGGCTCATGCGTTGC 61.010 55.000 0.00 0.00 40.82 4.17
4428 5661 2.305009 ACACTGGGACCGTATACTAGC 58.695 52.381 0.56 0.00 0.00 3.42
4439 5686 4.608951 GTGTCGATTCTATACACTGGGAC 58.391 47.826 0.00 0.00 40.25 4.46
4495 5742 9.045745 ACAAAGTTGGGTCATATATTTTGGAAT 57.954 29.630 7.01 0.00 0.00 3.01
4497 5744 8.962679 GTACAAAGTTGGGTCATATATTTTGGA 58.037 33.333 7.01 0.00 0.00 3.53
4498 5745 8.966868 AGTACAAAGTTGGGTCATATATTTTGG 58.033 33.333 0.00 0.00 0.00 3.28
4508 5755 7.994334 ACTGTATTTTAGTACAAAGTTGGGTCA 59.006 33.333 0.00 0.00 34.41 4.02
4537 5784 8.893727 CCGTTCTAAAATAGATGATCCAACTTT 58.106 33.333 0.00 0.00 34.22 2.66
4540 5787 7.171678 CCTCCGTTCTAAAATAGATGATCCAAC 59.828 40.741 0.00 0.00 34.22 3.77
4542 5789 6.239600 CCCTCCGTTCTAAAATAGATGATCCA 60.240 42.308 0.00 0.00 34.22 3.41
4543 5790 6.014499 TCCCTCCGTTCTAAAATAGATGATCC 60.014 42.308 0.00 0.00 34.22 3.36
4544 5791 6.994221 TCCCTCCGTTCTAAAATAGATGATC 58.006 40.000 0.00 0.00 34.22 2.92
4545 5792 6.555360 ACTCCCTCCGTTCTAAAATAGATGAT 59.445 38.462 0.00 0.00 34.22 2.45
4547 5794 6.163135 ACTCCCTCCGTTCTAAAATAGATG 57.837 41.667 0.00 0.00 34.22 2.90
4550 5797 6.712179 AGTACTCCCTCCGTTCTAAAATAG 57.288 41.667 0.00 0.00 0.00 1.73
4552 5799 6.193504 ACTAGTACTCCCTCCGTTCTAAAAT 58.806 40.000 0.00 0.00 0.00 1.82
4553 5800 5.574188 ACTAGTACTCCCTCCGTTCTAAAA 58.426 41.667 0.00 0.00 0.00 1.52
4554 5801 5.184892 ACTAGTACTCCCTCCGTTCTAAA 57.815 43.478 0.00 0.00 0.00 1.85
4557 5804 3.735720 AACTAGTACTCCCTCCGTTCT 57.264 47.619 0.00 0.00 0.00 3.01
4558 5805 4.097135 GGTTAACTAGTACTCCCTCCGTTC 59.903 50.000 0.00 0.00 0.00 3.95
4559 5806 4.019858 GGTTAACTAGTACTCCCTCCGTT 58.980 47.826 0.00 0.00 0.00 4.44
4587 5850 3.384348 TCCGGCCAGGACACTTAC 58.616 61.111 11.66 0.00 45.98 2.34
4617 5880 3.651423 GCCCTAGGTATCCAATGGTTAGT 59.349 47.826 8.29 0.00 0.00 2.24
4647 5910 2.630158 ACTAGCTCTACGTGATGTCGT 58.370 47.619 0.00 0.00 45.97 4.34
4653 5916 9.918630 AAATTAGTTTAAACTAGCTCTACGTGA 57.081 29.630 23.46 9.19 42.04 4.35
4685 5948 6.996879 AGTTGTAGAGTACACAGTGTTAGAGA 59.003 38.462 12.53 0.00 38.63 3.10
4686 5949 7.041303 TGAGTTGTAGAGTACACAGTGTTAGAG 60.041 40.741 12.53 0.00 38.63 2.43
4687 5950 6.769341 TGAGTTGTAGAGTACACAGTGTTAGA 59.231 38.462 12.53 0.00 38.63 2.10
4688 5951 6.856938 GTGAGTTGTAGAGTACACAGTGTTAG 59.143 42.308 12.53 0.00 38.63 2.34
4689 5952 6.544931 AGTGAGTTGTAGAGTACACAGTGTTA 59.455 38.462 12.53 0.00 38.63 2.41
4690 5953 5.360144 AGTGAGTTGTAGAGTACACAGTGTT 59.640 40.000 12.53 0.00 38.63 3.32
4691 5954 4.888239 AGTGAGTTGTAGAGTACACAGTGT 59.112 41.667 11.87 11.87 38.63 3.55
4692 5955 5.215903 CAGTGAGTTGTAGAGTACACAGTG 58.784 45.833 0.00 0.00 38.63 3.66
4693 5956 4.888239 ACAGTGAGTTGTAGAGTACACAGT 59.112 41.667 0.00 0.00 38.63 3.55
4694 5957 5.215903 CACAGTGAGTTGTAGAGTACACAG 58.784 45.833 0.00 0.00 38.63 3.66
4695 5958 4.643334 ACACAGTGAGTTGTAGAGTACACA 59.357 41.667 7.81 0.00 38.63 3.72
4696 5959 5.184340 ACACAGTGAGTTGTAGAGTACAC 57.816 43.478 7.81 0.00 38.63 2.90
4697 5960 5.049886 CGTACACAGTGAGTTGTAGAGTACA 60.050 44.000 7.81 0.00 32.12 2.90
4698 5961 5.380651 CGTACACAGTGAGTTGTAGAGTAC 58.619 45.833 7.81 0.00 30.61 2.73
4699 5962 4.083643 GCGTACACAGTGAGTTGTAGAGTA 60.084 45.833 7.81 0.00 0.00 2.59
4700 5963 3.304525 GCGTACACAGTGAGTTGTAGAGT 60.305 47.826 7.81 0.00 0.00 3.24
4701 5964 3.058155 AGCGTACACAGTGAGTTGTAGAG 60.058 47.826 7.81 0.00 0.00 2.43
4702 5965 2.882761 AGCGTACACAGTGAGTTGTAGA 59.117 45.455 7.81 0.00 0.00 2.59
4703 5966 3.284323 AGCGTACACAGTGAGTTGTAG 57.716 47.619 7.81 0.00 0.00 2.74
4704 5967 3.565063 TGTAGCGTACACAGTGAGTTGTA 59.435 43.478 7.81 0.00 32.89 2.41
4705 5968 2.359848 TGTAGCGTACACAGTGAGTTGT 59.640 45.455 7.81 0.00 32.89 3.32
4706 5969 3.007979 TGTAGCGTACACAGTGAGTTG 57.992 47.619 7.81 0.00 32.89 3.16
4707 5970 3.181484 TGTTGTAGCGTACACAGTGAGTT 60.181 43.478 7.81 0.00 38.63 3.01
4708 5971 2.359848 TGTTGTAGCGTACACAGTGAGT 59.640 45.455 7.81 0.00 38.63 3.41
4709 5972 2.980476 CTGTTGTAGCGTACACAGTGAG 59.020 50.000 7.81 0.00 38.63 3.51
4710 5973 2.619646 TCTGTTGTAGCGTACACAGTGA 59.380 45.455 7.81 0.00 38.63 3.41
4711 5974 3.007979 TCTGTTGTAGCGTACACAGTG 57.992 47.619 0.00 0.00 38.63 3.66
4712 5975 3.378339 GTTCTGTTGTAGCGTACACAGT 58.622 45.455 8.20 0.00 38.63 3.55
4713 5976 2.729882 GGTTCTGTTGTAGCGTACACAG 59.270 50.000 3.06 3.06 38.63 3.66
4714 5977 2.101082 TGGTTCTGTTGTAGCGTACACA 59.899 45.455 0.00 0.00 38.63 3.72
4715 5978 2.746269 TGGTTCTGTTGTAGCGTACAC 58.254 47.619 0.00 0.00 38.63 2.90
4716 5979 3.322369 CATGGTTCTGTTGTAGCGTACA 58.678 45.455 0.00 0.00 36.79 2.90
4717 5980 2.093783 GCATGGTTCTGTTGTAGCGTAC 59.906 50.000 0.00 0.00 0.00 3.67
4718 5981 2.343101 GCATGGTTCTGTTGTAGCGTA 58.657 47.619 0.00 0.00 0.00 4.42
4719 5982 1.156736 GCATGGTTCTGTTGTAGCGT 58.843 50.000 0.00 0.00 0.00 5.07
4720 5983 0.447801 GGCATGGTTCTGTTGTAGCG 59.552 55.000 0.00 0.00 0.00 4.26
4721 5984 1.533625 TGGCATGGTTCTGTTGTAGC 58.466 50.000 0.00 0.00 0.00 3.58
4722 5985 2.489329 CCTTGGCATGGTTCTGTTGTAG 59.511 50.000 11.13 0.00 0.00 2.74
4723 5986 2.513753 CCTTGGCATGGTTCTGTTGTA 58.486 47.619 11.13 0.00 0.00 2.41
4724 5987 1.331214 CCTTGGCATGGTTCTGTTGT 58.669 50.000 11.13 0.00 0.00 3.32
4725 5988 0.604578 CCCTTGGCATGGTTCTGTTG 59.395 55.000 17.23 0.00 0.00 3.33
4726 5989 0.482446 TCCCTTGGCATGGTTCTGTT 59.518 50.000 17.23 0.00 0.00 3.16
4727 5990 0.482446 TTCCCTTGGCATGGTTCTGT 59.518 50.000 17.23 0.00 0.00 3.41
4728 5991 1.180029 CTTCCCTTGGCATGGTTCTG 58.820 55.000 17.23 3.26 0.00 3.02
4729 5992 0.040204 CCTTCCCTTGGCATGGTTCT 59.960 55.000 17.23 0.00 0.00 3.01
4730 5993 0.972471 CCCTTCCCTTGGCATGGTTC 60.972 60.000 17.23 0.00 0.00 3.62
4731 5994 1.079073 CCCTTCCCTTGGCATGGTT 59.921 57.895 17.23 0.00 0.00 3.67
4732 5995 1.856873 TCCCTTCCCTTGGCATGGT 60.857 57.895 17.23 0.00 0.00 3.55
4733 5996 1.380380 GTCCCTTCCCTTGGCATGG 60.380 63.158 12.30 12.30 0.00 3.66
4734 5997 0.251742 TTGTCCCTTCCCTTGGCATG 60.252 55.000 0.00 0.00 0.00 4.06
4735 5998 0.486879 TTTGTCCCTTCCCTTGGCAT 59.513 50.000 0.00 0.00 0.00 4.40
4736 5999 0.178964 CTTTGTCCCTTCCCTTGGCA 60.179 55.000 0.00 0.00 0.00 4.92
4737 6000 0.178961 ACTTTGTCCCTTCCCTTGGC 60.179 55.000 0.00 0.00 0.00 4.52
4738 6001 1.620822 CACTTTGTCCCTTCCCTTGG 58.379 55.000 0.00 0.00 0.00 3.61
4739 6002 1.144913 TCCACTTTGTCCCTTCCCTTG 59.855 52.381 0.00 0.00 0.00 3.61
4740 6003 1.145119 GTCCACTTTGTCCCTTCCCTT 59.855 52.381 0.00 0.00 0.00 3.95
4741 6004 0.771755 GTCCACTTTGTCCCTTCCCT 59.228 55.000 0.00 0.00 0.00 4.20
4742 6005 0.476771 TGTCCACTTTGTCCCTTCCC 59.523 55.000 0.00 0.00 0.00 3.97
4743 6006 1.954382 GTTGTCCACTTTGTCCCTTCC 59.046 52.381 0.00 0.00 0.00 3.46
4744 6007 2.650322 TGTTGTCCACTTTGTCCCTTC 58.350 47.619 0.00 0.00 0.00 3.46
4745 6008 2.818751 TGTTGTCCACTTTGTCCCTT 57.181 45.000 0.00 0.00 0.00 3.95
4746 6009 2.818751 TTGTTGTCCACTTTGTCCCT 57.181 45.000 0.00 0.00 0.00 4.20
4747 6010 3.550030 CGATTTGTTGTCCACTTTGTCCC 60.550 47.826 0.00 0.00 0.00 4.46
4748 6011 3.628017 CGATTTGTTGTCCACTTTGTCC 58.372 45.455 0.00 0.00 0.00 4.02
4749 6012 3.042887 GCGATTTGTTGTCCACTTTGTC 58.957 45.455 0.00 0.00 0.00 3.18
4750 6013 2.425312 TGCGATTTGTTGTCCACTTTGT 59.575 40.909 0.00 0.00 0.00 2.83
4751 6014 3.077229 TGCGATTTGTTGTCCACTTTG 57.923 42.857 0.00 0.00 0.00 2.77
4752 6015 3.317711 TCATGCGATTTGTTGTCCACTTT 59.682 39.130 0.00 0.00 0.00 2.66
4753 6016 2.884012 TCATGCGATTTGTTGTCCACTT 59.116 40.909 0.00 0.00 0.00 3.16
4754 6017 2.503331 TCATGCGATTTGTTGTCCACT 58.497 42.857 0.00 0.00 0.00 4.00
4755 6018 2.987413 TCATGCGATTTGTTGTCCAC 57.013 45.000 0.00 0.00 0.00 4.02
4756 6019 5.833406 ATATTCATGCGATTTGTTGTCCA 57.167 34.783 0.00 0.00 0.00 4.02
4757 6020 8.177663 CCTATATATTCATGCGATTTGTTGTCC 58.822 37.037 0.00 0.00 0.00 4.02
4758 6021 8.935844 TCCTATATATTCATGCGATTTGTTGTC 58.064 33.333 0.00 0.00 0.00 3.18
4759 6022 8.846943 TCCTATATATTCATGCGATTTGTTGT 57.153 30.769 0.00 0.00 0.00 3.32
4766 6029 9.113838 GGTGAAATTCCTATATATTCATGCGAT 57.886 33.333 0.00 0.00 33.12 4.58
4767 6030 8.100164 TGGTGAAATTCCTATATATTCATGCGA 58.900 33.333 0.00 0.00 33.12 5.10
4768 6031 8.267620 TGGTGAAATTCCTATATATTCATGCG 57.732 34.615 0.00 0.00 33.12 4.73
4777 6040 8.990163 AACCGTTTATGGTGAAATTCCTATAT 57.010 30.769 0.00 0.00 42.89 0.86
4778 6041 8.047911 TGAACCGTTTATGGTGAAATTCCTATA 58.952 33.333 0.00 0.00 42.89 1.31
4779 6042 6.887545 TGAACCGTTTATGGTGAAATTCCTAT 59.112 34.615 0.00 0.00 42.89 2.57
4780 6043 6.239396 TGAACCGTTTATGGTGAAATTCCTA 58.761 36.000 0.00 0.00 42.89 2.94
4781 6044 5.074115 TGAACCGTTTATGGTGAAATTCCT 58.926 37.500 0.00 0.00 42.89 3.36
4782 6045 5.048294 ACTGAACCGTTTATGGTGAAATTCC 60.048 40.000 0.00 0.00 42.89 3.01
4783 6046 6.009115 ACTGAACCGTTTATGGTGAAATTC 57.991 37.500 0.00 0.00 42.89 2.17
4784 6047 6.399639 AACTGAACCGTTTATGGTGAAATT 57.600 33.333 0.00 0.00 42.89 1.82
4785 6048 7.513371 TTAACTGAACCGTTTATGGTGAAAT 57.487 32.000 0.00 0.00 42.89 2.17
4786 6049 6.939132 TTAACTGAACCGTTTATGGTGAAA 57.061 33.333 0.00 0.00 42.89 2.69
4787 6050 6.939132 TTTAACTGAACCGTTTATGGTGAA 57.061 33.333 0.00 0.00 42.89 3.18
4788 6051 7.513371 AATTTAACTGAACCGTTTATGGTGA 57.487 32.000 0.00 0.00 42.89 4.02
4789 6052 8.582433 AAAATTTAACTGAACCGTTTATGGTG 57.418 30.769 0.00 0.00 42.89 4.17
4790 6053 8.635328 AGAAAATTTAACTGAACCGTTTATGGT 58.365 29.630 0.00 0.00 46.67 3.55
4791 6054 8.911662 CAGAAAATTTAACTGAACCGTTTATGG 58.088 33.333 15.70 0.00 34.07 2.74
4792 6055 8.911662 CCAGAAAATTTAACTGAACCGTTTATG 58.088 33.333 19.94 0.00 34.07 1.90
4793 6056 8.852135 TCCAGAAAATTTAACTGAACCGTTTAT 58.148 29.630 19.94 0.00 34.07 1.40
4794 6057 8.223177 TCCAGAAAATTTAACTGAACCGTTTA 57.777 30.769 19.94 0.00 34.07 2.01
4795 6058 7.067737 TCTCCAGAAAATTTAACTGAACCGTTT 59.932 33.333 19.94 0.00 34.07 3.60
4796 6059 6.544564 TCTCCAGAAAATTTAACTGAACCGTT 59.455 34.615 19.94 0.00 34.07 4.44
4797 6060 6.059484 TCTCCAGAAAATTTAACTGAACCGT 58.941 36.000 19.94 0.00 34.07 4.83
4798 6061 6.554334 TCTCCAGAAAATTTAACTGAACCG 57.446 37.500 19.94 8.75 34.07 4.44
4799 6062 9.411801 GAATTCTCCAGAAAATTTAACTGAACC 57.588 33.333 19.94 5.82 37.61 3.62
4800 6063 9.411801 GGAATTCTCCAGAAAATTTAACTGAAC 57.588 33.333 19.94 8.16 41.96 3.18
4801 6064 8.585018 GGGAATTCTCCAGAAAATTTAACTGAA 58.415 33.333 19.94 11.09 44.51 3.02
4802 6065 7.178451 GGGGAATTCTCCAGAAAATTTAACTGA 59.822 37.037 20.11 9.97 44.51 3.41
4803 6066 7.323420 GGGGAATTCTCCAGAAAATTTAACTG 58.677 38.462 20.11 14.49 44.51 3.16
4804 6067 6.152831 CGGGGAATTCTCCAGAAAATTTAACT 59.847 38.462 24.21 0.00 44.51 2.24
4805 6068 6.330278 CGGGGAATTCTCCAGAAAATTTAAC 58.670 40.000 24.21 0.00 44.51 2.01
4806 6069 5.105513 GCGGGGAATTCTCCAGAAAATTTAA 60.106 40.000 24.21 0.00 44.51 1.52
4807 6070 4.401202 GCGGGGAATTCTCCAGAAAATTTA 59.599 41.667 24.21 0.00 44.51 1.40
4808 6071 3.195610 GCGGGGAATTCTCCAGAAAATTT 59.804 43.478 24.21 0.00 44.51 1.82
4809 6072 2.760650 GCGGGGAATTCTCCAGAAAATT 59.239 45.455 24.21 0.00 44.51 1.82
4810 6073 2.379005 GCGGGGAATTCTCCAGAAAAT 58.621 47.619 24.21 0.00 44.51 1.82
4811 6074 1.834188 GCGGGGAATTCTCCAGAAAA 58.166 50.000 24.21 0.00 44.51 2.29
4812 6075 0.392461 CGCGGGGAATTCTCCAGAAA 60.392 55.000 24.21 0.00 44.51 2.52
4813 6076 1.220749 CGCGGGGAATTCTCCAGAA 59.779 57.895 24.21 0.00 44.51 3.02
4814 6077 1.261938 TTCGCGGGGAATTCTCCAGA 61.262 55.000 24.21 18.59 44.51 3.86
4815 6078 0.811616 CTTCGCGGGGAATTCTCCAG 60.812 60.000 24.21 16.62 44.51 3.86
4816 6079 1.220749 CTTCGCGGGGAATTCTCCA 59.779 57.895 24.21 1.57 44.51 3.86
4817 6080 2.180862 GCTTCGCGGGGAATTCTCC 61.181 63.158 15.01 15.01 41.59 3.71
4818 6081 0.744771 AAGCTTCGCGGGGAATTCTC 60.745 55.000 6.13 0.00 33.26 2.87
4819 6082 0.322546 AAAGCTTCGCGGGGAATTCT 60.323 50.000 6.13 6.02 33.26 2.40
4820 6083 0.179163 CAAAGCTTCGCGGGGAATTC 60.179 55.000 6.13 0.00 33.26 2.17
4821 6084 0.608035 TCAAAGCTTCGCGGGGAATT 60.608 50.000 6.13 0.00 33.26 2.17
4822 6085 0.394352 ATCAAAGCTTCGCGGGGAAT 60.394 50.000 6.13 0.00 33.26 3.01
4823 6086 1.002624 ATCAAAGCTTCGCGGGGAA 60.003 52.632 6.13 7.31 0.00 3.97
4824 6087 1.745115 CATCAAAGCTTCGCGGGGA 60.745 57.895 6.13 0.00 0.00 4.81
4825 6088 2.793946 CATCAAAGCTTCGCGGGG 59.206 61.111 6.13 0.00 0.00 5.73
4826 6089 2.100991 GCATCAAAGCTTCGCGGG 59.899 61.111 6.13 0.11 0.00 6.13
4827 6090 2.100991 GGCATCAAAGCTTCGCGG 59.899 61.111 6.13 0.00 34.17 6.46
4828 6091 2.100991 GGGCATCAAAGCTTCGCG 59.899 61.111 0.00 0.00 34.17 5.87
4829 6092 1.138247 CAGGGCATCAAAGCTTCGC 59.862 57.895 0.00 0.09 34.17 4.70
4830 6093 0.883833 AACAGGGCATCAAAGCTTCG 59.116 50.000 0.00 0.00 34.17 3.79
4831 6094 1.067354 CCAACAGGGCATCAAAGCTTC 60.067 52.381 0.00 0.00 34.17 3.86
4832 6095 0.971386 CCAACAGGGCATCAAAGCTT 59.029 50.000 0.00 0.00 34.17 3.74
4833 6096 0.178953 ACCAACAGGGCATCAAAGCT 60.179 50.000 0.00 0.00 42.05 3.74
4834 6097 0.681175 AACCAACAGGGCATCAAAGC 59.319 50.000 0.00 0.00 42.05 3.51
4835 6098 2.242043 AGAACCAACAGGGCATCAAAG 58.758 47.619 0.00 0.00 42.05 2.77
4836 6099 2.380064 AGAACCAACAGGGCATCAAA 57.620 45.000 0.00 0.00 42.05 2.69
4837 6100 2.238521 GAAGAACCAACAGGGCATCAA 58.761 47.619 0.00 0.00 42.05 2.57
4838 6101 1.547675 GGAAGAACCAACAGGGCATCA 60.548 52.381 0.00 0.00 42.05 3.07
4839 6102 1.177401 GGAAGAACCAACAGGGCATC 58.823 55.000 0.00 0.00 42.05 3.91
4840 6103 0.251787 GGGAAGAACCAACAGGGCAT 60.252 55.000 0.00 0.00 42.05 4.40
4841 6104 1.152830 GGGAAGAACCAACAGGGCA 59.847 57.895 0.00 0.00 42.05 5.36
4842 6105 0.895559 CTGGGAAGAACCAACAGGGC 60.896 60.000 0.00 0.00 40.68 5.19
4843 6106 0.478507 ACTGGGAAGAACCAACAGGG 59.521 55.000 0.00 0.00 40.68 4.45
4844 6107 1.133792 ACACTGGGAAGAACCAACAGG 60.134 52.381 0.00 0.00 40.68 4.00
4845 6108 2.348411 ACACTGGGAAGAACCAACAG 57.652 50.000 0.00 0.00 40.68 3.16
4846 6109 2.818751 AACACTGGGAAGAACCAACA 57.181 45.000 0.00 0.00 40.68 3.33
4847 6110 3.146847 CCTAACACTGGGAAGAACCAAC 58.853 50.000 0.00 0.00 40.68 3.77
4848 6111 2.488347 GCCTAACACTGGGAAGAACCAA 60.488 50.000 0.00 0.00 40.68 3.67
4849 6112 1.073284 GCCTAACACTGGGAAGAACCA 59.927 52.381 0.00 0.00 41.20 3.67
4850 6113 1.351350 AGCCTAACACTGGGAAGAACC 59.649 52.381 0.00 0.00 38.08 3.62
4851 6114 2.861147 AGCCTAACACTGGGAAGAAC 57.139 50.000 0.00 0.00 0.00 3.01
4852 6115 3.199946 CCATAGCCTAACACTGGGAAGAA 59.800 47.826 0.00 0.00 0.00 2.52
4853 6116 2.771943 CCATAGCCTAACACTGGGAAGA 59.228 50.000 0.00 0.00 0.00 2.87
4854 6117 2.746472 GCCATAGCCTAACACTGGGAAG 60.746 54.545 0.00 0.00 0.00 3.46
4855 6118 1.211949 GCCATAGCCTAACACTGGGAA 59.788 52.381 0.00 0.00 0.00 3.97
4856 6119 0.837272 GCCATAGCCTAACACTGGGA 59.163 55.000 0.00 0.00 0.00 4.37
4857 6120 0.532862 CGCCATAGCCTAACACTGGG 60.533 60.000 0.00 0.00 34.57 4.45
4858 6121 0.178068 ACGCCATAGCCTAACACTGG 59.822 55.000 0.00 0.00 34.57 4.00
4859 6122 1.665679 CAACGCCATAGCCTAACACTG 59.334 52.381 0.00 0.00 34.57 3.66
4860 6123 2.012051 GCAACGCCATAGCCTAACACT 61.012 52.381 0.00 0.00 34.57 3.55
4861 6124 0.377203 GCAACGCCATAGCCTAACAC 59.623 55.000 0.00 0.00 34.57 3.32
4862 6125 0.251916 AGCAACGCCATAGCCTAACA 59.748 50.000 0.00 0.00 34.57 2.41
4863 6126 2.234300 TAGCAACGCCATAGCCTAAC 57.766 50.000 0.00 0.00 34.57 2.34
4864 6127 2.992124 TTAGCAACGCCATAGCCTAA 57.008 45.000 0.00 0.00 34.57 2.69
4865 6128 2.169769 ACTTTAGCAACGCCATAGCCTA 59.830 45.455 0.00 0.00 34.57 3.93
4866 6129 1.065418 ACTTTAGCAACGCCATAGCCT 60.065 47.619 0.00 0.00 34.57 4.58
4867 6130 1.379527 ACTTTAGCAACGCCATAGCC 58.620 50.000 0.00 0.00 34.57 3.93
4868 6131 3.195661 ACTACTTTAGCAACGCCATAGC 58.804 45.455 0.00 0.00 0.00 2.97
4869 6132 5.796350 AAACTACTTTAGCAACGCCATAG 57.204 39.130 0.00 0.00 0.00 2.23
4870 6133 6.238266 GCATAAACTACTTTAGCAACGCCATA 60.238 38.462 0.00 0.00 0.00 2.74
4871 6134 5.448632 GCATAAACTACTTTAGCAACGCCAT 60.449 40.000 0.00 0.00 0.00 4.40
4872 6135 4.142773 GCATAAACTACTTTAGCAACGCCA 60.143 41.667 0.00 0.00 0.00 5.69
4873 6136 4.094442 AGCATAAACTACTTTAGCAACGCC 59.906 41.667 0.00 0.00 0.00 5.68
4874 6137 5.217895 AGCATAAACTACTTTAGCAACGC 57.782 39.130 0.00 0.00 0.00 4.84
4875 6138 6.846283 GCATAGCATAAACTACTTTAGCAACG 59.154 38.462 0.00 0.00 0.00 4.10
4876 6139 7.920738 AGCATAGCATAAACTACTTTAGCAAC 58.079 34.615 0.00 0.00 0.00 4.17
4877 6140 9.261180 CTAGCATAGCATAAACTACTTTAGCAA 57.739 33.333 0.00 0.00 0.00 3.91
4878 6141 7.872993 CCTAGCATAGCATAAACTACTTTAGCA 59.127 37.037 0.00 0.00 37.37 3.49
4879 6142 7.148557 GCCTAGCATAGCATAAACTACTTTAGC 60.149 40.741 0.00 0.00 37.37 3.09
4880 6143 8.091449 AGCCTAGCATAGCATAAACTACTTTAG 58.909 37.037 0.00 0.00 37.37 1.85
4881 6144 7.963532 AGCCTAGCATAGCATAAACTACTTTA 58.036 34.615 0.00 0.00 37.37 1.85
4882 6145 6.831976 AGCCTAGCATAGCATAAACTACTTT 58.168 36.000 0.00 0.00 37.37 2.66
4883 6146 6.426646 AGCCTAGCATAGCATAAACTACTT 57.573 37.500 0.00 0.00 37.37 2.24
4884 6147 7.726033 ATAGCCTAGCATAGCATAAACTACT 57.274 36.000 0.00 0.00 37.37 2.57
4885 6148 8.254508 AGAATAGCCTAGCATAGCATAAACTAC 58.745 37.037 0.00 0.00 37.37 2.73
4886 6149 8.367660 AGAATAGCCTAGCATAGCATAAACTA 57.632 34.615 0.00 0.00 37.37 2.24
4887 6150 7.251321 AGAATAGCCTAGCATAGCATAAACT 57.749 36.000 0.00 0.00 37.37 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.