Multiple sequence alignment - TraesCS5D01G550600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G550600 chr5D 100.000 2596 0 0 1 2596 557007517 557004922 0.000000e+00 4795.0
1 TraesCS5D01G550600 chr5D 94.118 51 0 1 2368 2415 449995086 449995136 9.960000e-10 75.0
2 TraesCS5D01G550600 chr5D 92.157 51 4 0 2379 2429 332041748 332041798 3.580000e-09 73.1
3 TraesCS5D01G550600 chr5D 95.556 45 1 1 2551 2595 337145430 337145473 1.290000e-08 71.3
4 TraesCS5D01G550600 chr5B 88.375 1643 116 33 734 2355 709560972 709562560 0.000000e+00 1906.0
5 TraesCS5D01G550600 chr5B 92.672 232 14 3 476 707 709521067 709521295 5.350000e-87 331.0
6 TraesCS5D01G550600 chr5B 84.694 196 28 2 3 196 709520345 709520540 7.330000e-46 195.0
7 TraesCS5D01G550600 chr5B 97.561 41 1 0 2555 2595 395619716 395619756 1.290000e-08 71.3
8 TraesCS5D01G550600 chr4A 88.421 950 82 19 1239 2168 605651051 605650110 0.000000e+00 1120.0
9 TraesCS5D01G550600 chr4A 95.683 278 11 1 899 1175 605651350 605651073 1.830000e-121 446.0
10 TraesCS5D01G550600 chr2A 78.836 567 83 29 994 1542 758273295 758272748 5.320000e-92 348.0
11 TraesCS5D01G550600 chr2A 91.257 183 11 4 239 419 20954151 20953972 7.180000e-61 244.0
12 TraesCS5D01G550600 chr2A 92.727 55 3 1 2367 2421 352429265 352429318 7.700000e-11 78.7
13 TraesCS5D01G550600 chrUn 96.386 166 5 1 243 408 378125966 378126130 3.290000e-69 272.0
14 TraesCS5D01G550600 chrUn 95.858 169 6 1 243 411 378646228 378646061 3.290000e-69 272.0
15 TraesCS5D01G550600 chr6B 95.858 169 6 1 243 411 1900182 1900015 3.290000e-69 272.0
16 TraesCS5D01G550600 chr6B 95.858 169 6 1 243 411 1903605 1903438 3.290000e-69 272.0
17 TraesCS5D01G550600 chr6B 95.858 169 5 2 240 408 56380848 56381014 3.290000e-69 272.0
18 TraesCS5D01G550600 chr7D 95.833 168 6 1 244 411 480823111 480822945 1.180000e-68 270.0
19 TraesCS5D01G550600 chr2D 83.755 277 36 7 1277 1544 627629050 627629326 1.190000e-63 254.0
20 TraesCS5D01G550600 chr7A 93.413 167 11 0 245 411 669396453 669396287 5.550000e-62 248.0
21 TraesCS5D01G550600 chr7A 88.525 61 6 1 2379 2438 539445249 539445309 3.580000e-09 73.1
22 TraesCS5D01G550600 chr1D 92.857 168 9 2 242 408 15877685 15877850 9.280000e-60 241.0
23 TraesCS5D01G550600 chr3D 97.917 48 1 0 2368 2415 477906211 477906258 1.660000e-12 84.2
24 TraesCS5D01G550600 chr5A 97.826 46 1 0 2379 2424 691668727 691668772 2.140000e-11 80.5
25 TraesCS5D01G550600 chr5A 95.455 44 2 0 2550 2593 438266492 438266535 1.290000e-08 71.3
26 TraesCS5D01G550600 chr5A 89.655 58 2 2 2367 2421 451462855 451462799 1.290000e-08 71.3
27 TraesCS5D01G550600 chr3A 94.118 51 1 1 2367 2415 634944010 634944060 2.770000e-10 76.8
28 TraesCS5D01G550600 chr1A 87.097 62 5 2 2379 2437 490473061 490473000 1.670000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G550600 chr5D 557004922 557007517 2595 True 4795 4795 100.000 1 2596 1 chr5D.!!$R1 2595
1 TraesCS5D01G550600 chr5B 709560972 709562560 1588 False 1906 1906 88.375 734 2355 1 chr5B.!!$F2 1621
2 TraesCS5D01G550600 chr5B 709520345 709521295 950 False 263 331 88.683 3 707 2 chr5B.!!$F3 704
3 TraesCS5D01G550600 chr4A 605650110 605651350 1240 True 783 1120 92.052 899 2168 2 chr4A.!!$R1 1269
4 TraesCS5D01G550600 chr2A 758272748 758273295 547 True 348 348 78.836 994 1542 1 chr2A.!!$R2 548
5 TraesCS5D01G550600 chr6B 1900015 1903605 3590 True 272 272 95.858 243 411 2 chr6B.!!$R1 168

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
507 508 0.033366 CTTTGCCCCGGTTTTGGAAG 59.967 55.0 0.0 0.0 0.0 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1907 4212 0.107654 GGAGCAAGTAGGCAACCGAT 60.108 55.0 0.0 0.0 35.83 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.708734 CGCCGTCGTCAACAACCC 61.709 66.667 0.00 0.00 0.00 4.11
18 19 3.351416 GCCGTCGTCAACAACCCC 61.351 66.667 0.00 0.00 0.00 4.95
19 20 3.039588 CCGTCGTCAACAACCCCG 61.040 66.667 0.00 0.00 0.00 5.73
20 21 2.027897 CGTCGTCAACAACCCCGA 59.972 61.111 0.00 0.00 0.00 5.14
21 22 1.373748 CGTCGTCAACAACCCCGAT 60.374 57.895 0.00 0.00 0.00 4.18
22 23 0.109179 CGTCGTCAACAACCCCGATA 60.109 55.000 0.00 0.00 0.00 2.92
23 24 1.353076 GTCGTCAACAACCCCGATAC 58.647 55.000 0.00 0.00 0.00 2.24
24 25 0.109179 TCGTCAACAACCCCGATACG 60.109 55.000 0.00 0.00 0.00 3.06
25 26 1.689352 CGTCAACAACCCCGATACGC 61.689 60.000 0.00 0.00 0.00 4.42
26 27 1.078988 TCAACAACCCCGATACGCC 60.079 57.895 0.00 0.00 0.00 5.68
27 28 2.125431 AACAACCCCGATACGCCG 60.125 61.111 0.00 0.00 0.00 6.46
28 29 4.825252 ACAACCCCGATACGCCGC 62.825 66.667 0.00 0.00 0.00 6.53
29 30 4.823419 CAACCCCGATACGCCGCA 62.823 66.667 0.00 0.00 0.00 5.69
30 31 4.524318 AACCCCGATACGCCGCAG 62.524 66.667 0.00 0.00 0.00 5.18
32 33 4.944372 CCCCGATACGCCGCAGAC 62.944 72.222 0.00 0.00 0.00 3.51
33 34 4.201679 CCCGATACGCCGCAGACA 62.202 66.667 0.00 0.00 0.00 3.41
34 35 2.202690 CCGATACGCCGCAGACAA 60.203 61.111 0.00 0.00 0.00 3.18
35 36 2.230940 CCGATACGCCGCAGACAAG 61.231 63.158 0.00 0.00 0.00 3.16
36 37 2.860628 CGATACGCCGCAGACAAGC 61.861 63.158 0.00 0.00 0.00 4.01
37 38 1.809619 GATACGCCGCAGACAAGCA 60.810 57.895 0.00 0.00 0.00 3.91
38 39 1.358725 GATACGCCGCAGACAAGCAA 61.359 55.000 0.00 0.00 0.00 3.91
39 40 1.635663 ATACGCCGCAGACAAGCAAC 61.636 55.000 0.00 0.00 0.00 4.17
40 41 2.709125 TACGCCGCAGACAAGCAACT 62.709 55.000 0.00 0.00 0.00 3.16
41 42 2.558313 GCCGCAGACAAGCAACTC 59.442 61.111 0.00 0.00 0.00 3.01
42 43 1.963338 GCCGCAGACAAGCAACTCT 60.963 57.895 0.00 0.00 0.00 3.24
43 44 1.864862 CCGCAGACAAGCAACTCTG 59.135 57.895 0.00 0.00 37.55 3.35
52 53 3.266964 GCAACTCTGCCGCATCAA 58.733 55.556 0.00 0.00 43.26 2.57
53 54 1.580942 GCAACTCTGCCGCATCAAA 59.419 52.632 0.00 0.00 43.26 2.69
54 55 0.730494 GCAACTCTGCCGCATCAAAC 60.730 55.000 0.00 0.00 43.26 2.93
55 56 0.877071 CAACTCTGCCGCATCAAACT 59.123 50.000 0.00 0.00 0.00 2.66
56 57 1.135859 CAACTCTGCCGCATCAAACTC 60.136 52.381 0.00 0.00 0.00 3.01
57 58 0.674895 ACTCTGCCGCATCAAACTCC 60.675 55.000 0.00 0.00 0.00 3.85
58 59 1.372087 CTCTGCCGCATCAAACTCCC 61.372 60.000 0.00 0.00 0.00 4.30
59 60 1.675310 CTGCCGCATCAAACTCCCA 60.675 57.895 0.00 0.00 0.00 4.37
60 61 1.001020 TGCCGCATCAAACTCCCAT 60.001 52.632 0.00 0.00 0.00 4.00
61 62 1.314534 TGCCGCATCAAACTCCCATG 61.315 55.000 0.00 0.00 0.00 3.66
62 63 1.315257 GCCGCATCAAACTCCCATGT 61.315 55.000 0.00 0.00 0.00 3.21
63 64 0.452987 CCGCATCAAACTCCCATGTG 59.547 55.000 0.00 0.00 0.00 3.21
64 65 0.452987 CGCATCAAACTCCCATGTGG 59.547 55.000 0.00 0.00 0.00 4.17
65 66 1.838112 GCATCAAACTCCCATGTGGA 58.162 50.000 0.00 3.30 42.41 4.02
66 67 2.381911 GCATCAAACTCCCATGTGGAT 58.618 47.619 0.00 0.00 44.07 3.41
67 68 3.554934 GCATCAAACTCCCATGTGGATA 58.445 45.455 0.00 0.00 44.07 2.59
68 69 3.567164 GCATCAAACTCCCATGTGGATAG 59.433 47.826 0.00 0.53 44.07 2.08
69 70 4.686944 GCATCAAACTCCCATGTGGATAGA 60.687 45.833 0.00 1.70 44.07 1.98
70 71 5.628130 CATCAAACTCCCATGTGGATAGAT 58.372 41.667 0.00 3.49 44.07 1.98
71 72 5.296151 TCAAACTCCCATGTGGATAGATC 57.704 43.478 0.00 0.00 44.07 2.75
72 73 4.103153 TCAAACTCCCATGTGGATAGATCC 59.897 45.833 0.00 1.24 44.07 3.36
77 78 2.040813 CCCATGTGGATAGATCCTTGGG 59.959 54.545 20.76 20.76 46.16 4.12
78 79 4.533282 CCCATGTGGATAGATCCTTGGGT 61.533 52.174 23.36 3.22 46.18 4.51
79 80 6.574374 CCCATGTGGATAGATCCTTGGGTG 62.574 54.167 23.36 11.60 46.18 4.61
81 82 3.614399 GGATAGATCCTTGGGTGCG 57.386 57.895 0.98 0.00 43.73 5.34
82 83 0.035458 GGATAGATCCTTGGGTGCGG 59.965 60.000 0.98 0.00 43.73 5.69
83 84 0.035458 GATAGATCCTTGGGTGCGGG 59.965 60.000 0.00 0.00 0.00 6.13
84 85 0.399949 ATAGATCCTTGGGTGCGGGA 60.400 55.000 0.00 0.00 0.00 5.14
85 86 1.048724 TAGATCCTTGGGTGCGGGAG 61.049 60.000 0.00 0.00 32.28 4.30
86 87 2.610859 ATCCTTGGGTGCGGGAGT 60.611 61.111 0.00 0.00 32.28 3.85
87 88 2.876368 GATCCTTGGGTGCGGGAGTG 62.876 65.000 0.00 0.00 32.28 3.51
88 89 3.636231 CCTTGGGTGCGGGAGTGA 61.636 66.667 0.00 0.00 0.00 3.41
89 90 2.671070 CTTGGGTGCGGGAGTGAT 59.329 61.111 0.00 0.00 0.00 3.06
90 91 1.746615 CTTGGGTGCGGGAGTGATG 60.747 63.158 0.00 0.00 0.00 3.07
91 92 2.469465 CTTGGGTGCGGGAGTGATGT 62.469 60.000 0.00 0.00 0.00 3.06
92 93 2.436646 GGGTGCGGGAGTGATGTG 60.437 66.667 0.00 0.00 0.00 3.21
93 94 2.436646 GGTGCGGGAGTGATGTGG 60.437 66.667 0.00 0.00 0.00 4.17
94 95 2.347490 GTGCGGGAGTGATGTGGT 59.653 61.111 0.00 0.00 0.00 4.16
95 96 2.034879 GTGCGGGAGTGATGTGGTG 61.035 63.158 0.00 0.00 0.00 4.17
96 97 2.213513 TGCGGGAGTGATGTGGTGA 61.214 57.895 0.00 0.00 0.00 4.02
97 98 1.448540 GCGGGAGTGATGTGGTGAG 60.449 63.158 0.00 0.00 0.00 3.51
98 99 1.219124 CGGGAGTGATGTGGTGAGG 59.781 63.158 0.00 0.00 0.00 3.86
99 100 1.604378 GGGAGTGATGTGGTGAGGG 59.396 63.158 0.00 0.00 0.00 4.30
100 101 1.201429 GGGAGTGATGTGGTGAGGGT 61.201 60.000 0.00 0.00 0.00 4.34
101 102 0.693049 GGAGTGATGTGGTGAGGGTT 59.307 55.000 0.00 0.00 0.00 4.11
102 103 1.611673 GGAGTGATGTGGTGAGGGTTG 60.612 57.143 0.00 0.00 0.00 3.77
103 104 0.401738 AGTGATGTGGTGAGGGTTGG 59.598 55.000 0.00 0.00 0.00 3.77
104 105 0.110486 GTGATGTGGTGAGGGTTGGT 59.890 55.000 0.00 0.00 0.00 3.67
105 106 0.110295 TGATGTGGTGAGGGTTGGTG 59.890 55.000 0.00 0.00 0.00 4.17
106 107 0.609131 GATGTGGTGAGGGTTGGTGG 60.609 60.000 0.00 0.00 0.00 4.61
107 108 1.360393 ATGTGGTGAGGGTTGGTGGT 61.360 55.000 0.00 0.00 0.00 4.16
108 109 1.229076 GTGGTGAGGGTTGGTGGTT 59.771 57.895 0.00 0.00 0.00 3.67
109 110 1.106944 GTGGTGAGGGTTGGTGGTTG 61.107 60.000 0.00 0.00 0.00 3.77
110 111 2.200337 GGTGAGGGTTGGTGGTTGC 61.200 63.158 0.00 0.00 0.00 4.17
111 112 2.203280 TGAGGGTTGGTGGTTGCG 60.203 61.111 0.00 0.00 0.00 4.85
112 113 2.112297 GAGGGTTGGTGGTTGCGA 59.888 61.111 0.00 0.00 0.00 5.10
113 114 1.527380 GAGGGTTGGTGGTTGCGAA 60.527 57.895 0.00 0.00 0.00 4.70
114 115 0.893727 GAGGGTTGGTGGTTGCGAAT 60.894 55.000 0.00 0.00 0.00 3.34
115 116 1.178534 AGGGTTGGTGGTTGCGAATG 61.179 55.000 0.00 0.00 0.00 2.67
116 117 1.288752 GGTTGGTGGTTGCGAATGG 59.711 57.895 0.00 0.00 0.00 3.16
117 118 1.460273 GGTTGGTGGTTGCGAATGGT 61.460 55.000 0.00 0.00 0.00 3.55
118 119 1.240256 GTTGGTGGTTGCGAATGGTA 58.760 50.000 0.00 0.00 0.00 3.25
119 120 1.068816 GTTGGTGGTTGCGAATGGTAC 60.069 52.381 0.00 0.00 0.00 3.34
120 121 0.951525 TGGTGGTTGCGAATGGTACG 60.952 55.000 0.00 0.00 0.00 3.67
121 122 1.641123 GGTGGTTGCGAATGGTACGG 61.641 60.000 0.00 0.00 0.00 4.02
122 123 0.671163 GTGGTTGCGAATGGTACGGA 60.671 55.000 0.00 0.00 0.00 4.69
123 124 0.390603 TGGTTGCGAATGGTACGGAG 60.391 55.000 0.00 0.00 32.30 4.63
124 125 0.108520 GGTTGCGAATGGTACGGAGA 60.109 55.000 0.00 0.00 32.30 3.71
125 126 0.997196 GTTGCGAATGGTACGGAGAC 59.003 55.000 0.00 0.00 32.30 3.36
137 138 4.933064 GGAGACGAGGCGCGATGG 62.933 72.222 19.52 0.26 44.57 3.51
138 139 4.194720 GAGACGAGGCGCGATGGT 62.195 66.667 19.52 4.36 44.57 3.55
139 140 4.498520 AGACGAGGCGCGATGGTG 62.499 66.667 19.52 0.00 44.57 4.17
147 148 4.838152 CGCGATGGTGGTGGGAGG 62.838 72.222 0.00 0.00 0.00 4.30
148 149 3.717294 GCGATGGTGGTGGGAGGT 61.717 66.667 0.00 0.00 0.00 3.85
149 150 2.363975 GCGATGGTGGTGGGAGGTA 61.364 63.158 0.00 0.00 0.00 3.08
150 151 1.823295 CGATGGTGGTGGGAGGTAG 59.177 63.158 0.00 0.00 0.00 3.18
151 152 1.527370 GATGGTGGTGGGAGGTAGC 59.473 63.158 0.00 0.00 0.00 3.58
152 153 1.984288 GATGGTGGTGGGAGGTAGCC 61.984 65.000 0.00 0.00 0.00 3.93
153 154 3.782443 GGTGGTGGGAGGTAGCCG 61.782 72.222 0.00 0.00 0.00 5.52
154 155 3.782443 GTGGTGGGAGGTAGCCGG 61.782 72.222 0.00 0.00 0.00 6.13
159 160 4.162009 GGGAGGTAGCCGGGGGTA 62.162 72.222 2.18 0.00 0.00 3.69
160 161 2.041612 GGAGGTAGCCGGGGGTAA 60.042 66.667 2.18 0.00 0.00 2.85
161 162 2.138831 GGAGGTAGCCGGGGGTAAG 61.139 68.421 2.18 0.00 0.00 2.34
162 163 2.041197 AGGTAGCCGGGGGTAAGG 60.041 66.667 2.18 0.00 0.00 2.69
172 173 4.710167 GGGTAAGGCGGCGTTGGT 62.710 66.667 17.39 0.00 0.00 3.67
173 174 2.670592 GGTAAGGCGGCGTTGGTT 60.671 61.111 17.39 0.00 0.00 3.67
174 175 2.559330 GTAAGGCGGCGTTGGTTG 59.441 61.111 17.39 0.00 0.00 3.77
175 176 2.111460 TAAGGCGGCGTTGGTTGT 59.889 55.556 17.39 0.00 0.00 3.32
176 177 1.526455 TAAGGCGGCGTTGGTTGTT 60.526 52.632 17.39 0.00 0.00 2.83
177 178 1.787057 TAAGGCGGCGTTGGTTGTTG 61.787 55.000 17.39 0.00 0.00 3.33
181 182 2.279186 GGCGTTGGTTGTTGCCAC 60.279 61.111 0.00 0.00 46.76 5.01
182 183 2.279186 GCGTTGGTTGTTGCCACC 60.279 61.111 0.00 0.00 38.42 4.61
183 184 2.781158 GCGTTGGTTGTTGCCACCT 61.781 57.895 0.00 0.00 38.42 4.00
184 185 1.065600 CGTTGGTTGTTGCCACCTG 59.934 57.895 0.00 0.00 38.42 4.00
185 186 1.227234 GTTGGTTGTTGCCACCTGC 60.227 57.895 0.00 0.00 38.42 4.85
186 187 2.430610 TTGGTTGTTGCCACCTGCC 61.431 57.895 0.00 0.00 38.42 4.85
187 188 2.837291 GGTTGTTGCCACCTGCCA 60.837 61.111 0.00 0.00 40.16 4.92
188 189 2.730094 GTTGTTGCCACCTGCCAG 59.270 61.111 0.00 0.00 40.16 4.85
189 190 2.127232 GTTGTTGCCACCTGCCAGT 61.127 57.895 0.00 0.00 40.16 4.00
190 191 2.126596 TTGTTGCCACCTGCCAGTG 61.127 57.895 0.00 0.00 40.16 3.66
191 192 2.519302 GTTGCCACCTGCCAGTGT 60.519 61.111 2.90 0.00 40.16 3.55
192 193 2.519063 TTGCCACCTGCCAGTGTG 60.519 61.111 6.40 6.40 40.16 3.82
193 194 3.357444 TTGCCACCTGCCAGTGTGT 62.357 57.895 10.93 0.00 40.16 3.72
194 195 2.519302 GCCACCTGCCAGTGTGTT 60.519 61.111 10.93 0.00 35.93 3.32
195 196 2.848858 GCCACCTGCCAGTGTGTTG 61.849 63.158 10.93 1.00 35.93 3.33
196 197 2.723746 CACCTGCCAGTGTGTTGC 59.276 61.111 5.47 0.00 32.89 4.17
197 198 2.901840 ACCTGCCAGTGTGTTGCG 60.902 61.111 0.00 0.00 0.00 4.85
198 199 2.901840 CCTGCCAGTGTGTTGCGT 60.902 61.111 0.00 0.00 0.00 5.24
199 200 2.328989 CTGCCAGTGTGTTGCGTG 59.671 61.111 0.00 0.00 0.00 5.34
200 201 2.437537 TGCCAGTGTGTTGCGTGT 60.438 55.556 0.00 0.00 0.00 4.49
201 202 1.992233 CTGCCAGTGTGTTGCGTGTT 61.992 55.000 0.00 0.00 0.00 3.32
202 203 0.744771 TGCCAGTGTGTTGCGTGTTA 60.745 50.000 0.00 0.00 0.00 2.41
203 204 0.316689 GCCAGTGTGTTGCGTGTTAC 60.317 55.000 0.00 0.00 0.00 2.50
204 205 1.295792 CCAGTGTGTTGCGTGTTACT 58.704 50.000 0.00 0.00 0.00 2.24
205 206 1.260561 CCAGTGTGTTGCGTGTTACTC 59.739 52.381 0.00 0.00 0.00 2.59
206 207 1.260561 CAGTGTGTTGCGTGTTACTCC 59.739 52.381 0.00 0.00 0.00 3.85
207 208 1.138266 AGTGTGTTGCGTGTTACTCCT 59.862 47.619 0.00 0.00 0.00 3.69
208 209 1.260561 GTGTGTTGCGTGTTACTCCTG 59.739 52.381 0.00 0.00 0.00 3.86
209 210 0.234884 GTGTTGCGTGTTACTCCTGC 59.765 55.000 0.00 0.00 0.00 4.85
210 211 0.179070 TGTTGCGTGTTACTCCTGCA 60.179 50.000 0.00 0.00 0.00 4.41
211 212 1.156736 GTTGCGTGTTACTCCTGCAT 58.843 50.000 0.00 0.00 35.20 3.96
212 213 1.128692 GTTGCGTGTTACTCCTGCATC 59.871 52.381 0.00 0.00 35.20 3.91
213 214 0.391130 TGCGTGTTACTCCTGCATCC 60.391 55.000 0.00 0.00 0.00 3.51
214 215 0.108138 GCGTGTTACTCCTGCATCCT 60.108 55.000 0.00 0.00 0.00 3.24
215 216 1.136305 GCGTGTTACTCCTGCATCCTA 59.864 52.381 0.00 0.00 0.00 2.94
216 217 2.799917 GCGTGTTACTCCTGCATCCTAG 60.800 54.545 0.00 0.00 0.00 3.02
217 218 2.688446 CGTGTTACTCCTGCATCCTAGA 59.312 50.000 0.00 0.00 0.00 2.43
218 219 3.243234 CGTGTTACTCCTGCATCCTAGAG 60.243 52.174 0.00 0.00 0.00 2.43
219 220 3.954904 GTGTTACTCCTGCATCCTAGAGA 59.045 47.826 0.00 0.00 0.00 3.10
220 221 4.037446 GTGTTACTCCTGCATCCTAGAGAG 59.963 50.000 0.00 0.00 0.00 3.20
221 222 4.079730 TGTTACTCCTGCATCCTAGAGAGA 60.080 45.833 0.00 0.00 0.00 3.10
222 223 3.228188 ACTCCTGCATCCTAGAGAGAG 57.772 52.381 0.00 0.00 0.00 3.20
223 224 2.782925 ACTCCTGCATCCTAGAGAGAGA 59.217 50.000 0.00 0.00 0.00 3.10
224 225 3.181440 ACTCCTGCATCCTAGAGAGAGAG 60.181 52.174 0.00 0.00 0.00 3.20
225 226 3.052329 TCCTGCATCCTAGAGAGAGAGA 58.948 50.000 0.00 0.00 0.00 3.10
226 227 3.072915 TCCTGCATCCTAGAGAGAGAGAG 59.927 52.174 0.00 0.00 0.00 3.20
227 228 3.072915 CCTGCATCCTAGAGAGAGAGAGA 59.927 52.174 0.00 0.00 0.00 3.10
228 229 4.321718 CTGCATCCTAGAGAGAGAGAGAG 58.678 52.174 0.00 0.00 0.00 3.20
229 230 3.973305 TGCATCCTAGAGAGAGAGAGAGA 59.027 47.826 0.00 0.00 0.00 3.10
230 231 4.040829 TGCATCCTAGAGAGAGAGAGAGAG 59.959 50.000 0.00 0.00 0.00 3.20
231 232 4.284490 GCATCCTAGAGAGAGAGAGAGAGA 59.716 50.000 0.00 0.00 0.00 3.10
232 233 5.568423 GCATCCTAGAGAGAGAGAGAGAGAG 60.568 52.000 0.00 0.00 0.00 3.20
233 234 5.403558 TCCTAGAGAGAGAGAGAGAGAGA 57.596 47.826 0.00 0.00 0.00 3.10
234 235 5.389520 TCCTAGAGAGAGAGAGAGAGAGAG 58.610 50.000 0.00 0.00 0.00 3.20
235 236 5.134509 TCCTAGAGAGAGAGAGAGAGAGAGA 59.865 48.000 0.00 0.00 0.00 3.10
236 237 5.242838 CCTAGAGAGAGAGAGAGAGAGAGAC 59.757 52.000 0.00 0.00 0.00 3.36
237 238 4.877773 AGAGAGAGAGAGAGAGAGAGACT 58.122 47.826 0.00 0.00 0.00 3.24
238 239 5.276440 AGAGAGAGAGAGAGAGAGAGACTT 58.724 45.833 0.00 0.00 0.00 3.01
239 240 5.128499 AGAGAGAGAGAGAGAGAGAGACTTG 59.872 48.000 0.00 0.00 0.00 3.16
240 241 4.163078 AGAGAGAGAGAGAGAGAGACTTGG 59.837 50.000 0.00 0.00 0.00 3.61
241 242 4.104086 AGAGAGAGAGAGAGAGACTTGGA 58.896 47.826 0.00 0.00 0.00 3.53
294 295 0.179045 CGATGGACCACCCTGGAATC 60.179 60.000 0.00 0.00 40.96 2.52
322 323 7.014905 CCCCATAGCTTGTGTATAGTGTAGTAA 59.985 40.741 0.00 0.00 0.00 2.24
382 383 8.484575 TGTAAATATTTCTATTACCGGACCACA 58.515 33.333 9.46 0.00 0.00 4.17
393 394 0.888736 CGGACCACACTGGCAAATCA 60.889 55.000 0.00 0.00 42.67 2.57
416 417 3.876300 GCTACGCCAGTGACTTGG 58.124 61.111 0.00 0.00 41.35 3.61
417 418 1.292223 GCTACGCCAGTGACTTGGA 59.708 57.895 5.45 0.00 40.87 3.53
419 420 0.603569 CTACGCCAGTGACTTGGACT 59.396 55.000 5.45 0.00 40.87 3.85
421 422 0.317479 ACGCCAGTGACTTGGACTAC 59.683 55.000 5.45 0.00 40.87 2.73
422 423 0.603569 CGCCAGTGACTTGGACTACT 59.396 55.000 5.45 0.00 40.87 2.57
423 424 1.402984 CGCCAGTGACTTGGACTACTC 60.403 57.143 5.45 0.00 40.87 2.59
424 425 1.618837 GCCAGTGACTTGGACTACTCA 59.381 52.381 5.45 0.00 40.87 3.41
428 429 4.240888 CAGTGACTTGGACTACTCATGTG 58.759 47.826 0.00 0.00 0.00 3.21
429 430 3.259374 AGTGACTTGGACTACTCATGTGG 59.741 47.826 0.00 0.00 0.00 4.17
430 431 2.028112 TGACTTGGACTACTCATGTGGC 60.028 50.000 0.00 0.00 0.00 5.01
431 432 1.977854 ACTTGGACTACTCATGTGGCA 59.022 47.619 0.00 0.00 0.00 4.92
432 433 2.027745 ACTTGGACTACTCATGTGGCAG 60.028 50.000 0.00 0.00 0.00 4.85
433 434 0.904649 TGGACTACTCATGTGGCAGG 59.095 55.000 0.00 0.00 0.00 4.85
434 435 0.905357 GGACTACTCATGTGGCAGGT 59.095 55.000 0.00 0.00 0.00 4.00
435 436 1.406069 GGACTACTCATGTGGCAGGTG 60.406 57.143 0.00 0.00 0.00 4.00
436 437 1.550524 GACTACTCATGTGGCAGGTGA 59.449 52.381 0.00 0.00 0.00 4.02
437 438 1.552337 ACTACTCATGTGGCAGGTGAG 59.448 52.381 21.19 21.19 43.76 3.51
438 439 1.827344 CTACTCATGTGGCAGGTGAGA 59.173 52.381 26.69 14.28 41.38 3.27
439 440 1.283347 ACTCATGTGGCAGGTGAGAT 58.717 50.000 26.69 13.66 41.38 2.75
441 442 2.286872 CTCATGTGGCAGGTGAGATTC 58.713 52.381 19.17 0.00 41.38 2.52
442 443 1.629861 TCATGTGGCAGGTGAGATTCA 59.370 47.619 0.00 0.00 0.00 2.57
443 444 2.040145 TCATGTGGCAGGTGAGATTCAA 59.960 45.455 0.00 0.00 0.00 2.69
444 445 2.655090 TGTGGCAGGTGAGATTCAAA 57.345 45.000 0.00 0.00 0.00 2.69
445 446 2.942804 TGTGGCAGGTGAGATTCAAAA 58.057 42.857 0.00 0.00 0.00 2.44
446 447 3.295093 TGTGGCAGGTGAGATTCAAAAA 58.705 40.909 0.00 0.00 0.00 1.94
447 448 3.068024 TGTGGCAGGTGAGATTCAAAAAC 59.932 43.478 0.00 0.00 0.00 2.43
448 449 3.319122 GTGGCAGGTGAGATTCAAAAACT 59.681 43.478 0.00 0.00 0.00 2.66
449 450 4.518970 GTGGCAGGTGAGATTCAAAAACTA 59.481 41.667 0.00 0.00 0.00 2.24
450 451 4.761739 TGGCAGGTGAGATTCAAAAACTAG 59.238 41.667 0.00 0.00 0.00 2.57
451 452 4.762251 GGCAGGTGAGATTCAAAAACTAGT 59.238 41.667 0.00 0.00 0.00 2.57
452 453 5.106515 GGCAGGTGAGATTCAAAAACTAGTC 60.107 44.000 0.00 0.00 0.00 2.59
453 454 5.470098 GCAGGTGAGATTCAAAAACTAGTCA 59.530 40.000 0.00 0.00 0.00 3.41
454 455 6.566753 GCAGGTGAGATTCAAAAACTAGTCAC 60.567 42.308 0.00 0.00 33.77 3.67
455 456 6.483307 CAGGTGAGATTCAAAAACTAGTCACA 59.517 38.462 0.00 0.00 35.77 3.58
456 457 6.483640 AGGTGAGATTCAAAAACTAGTCACAC 59.516 38.462 0.00 0.00 35.77 3.82
457 458 6.260050 GGTGAGATTCAAAAACTAGTCACACA 59.740 38.462 0.00 0.00 35.77 3.72
458 459 7.041098 GGTGAGATTCAAAAACTAGTCACACAT 60.041 37.037 0.00 0.00 35.77 3.21
459 460 8.012241 GTGAGATTCAAAAACTAGTCACACATC 58.988 37.037 0.00 0.00 34.51 3.06
460 461 7.933577 TGAGATTCAAAAACTAGTCACACATCT 59.066 33.333 0.00 0.00 0.00 2.90
461 462 8.682936 AGATTCAAAAACTAGTCACACATCTT 57.317 30.769 0.00 0.00 0.00 2.40
462 463 9.125026 AGATTCAAAAACTAGTCACACATCTTT 57.875 29.630 0.00 0.00 0.00 2.52
463 464 9.736023 GATTCAAAAACTAGTCACACATCTTTT 57.264 29.630 0.00 0.00 0.00 2.27
494 495 4.639135 GGAACCTCAATATCACTTTGCC 57.361 45.455 0.00 0.00 0.00 4.52
495 496 3.381590 GGAACCTCAATATCACTTTGCCC 59.618 47.826 0.00 0.00 0.00 5.36
496 497 3.018423 ACCTCAATATCACTTTGCCCC 57.982 47.619 0.00 0.00 0.00 5.80
497 498 1.949525 CCTCAATATCACTTTGCCCCG 59.050 52.381 0.00 0.00 0.00 5.73
498 499 1.949525 CTCAATATCACTTTGCCCCGG 59.050 52.381 0.00 0.00 0.00 5.73
499 500 1.283613 TCAATATCACTTTGCCCCGGT 59.716 47.619 0.00 0.00 0.00 5.28
500 501 2.099405 CAATATCACTTTGCCCCGGTT 58.901 47.619 0.00 0.00 0.00 4.44
501 502 2.495669 CAATATCACTTTGCCCCGGTTT 59.504 45.455 0.00 0.00 0.00 3.27
502 503 2.296073 TATCACTTTGCCCCGGTTTT 57.704 45.000 0.00 0.00 0.00 2.43
503 504 0.678950 ATCACTTTGCCCCGGTTTTG 59.321 50.000 0.00 0.00 0.00 2.44
504 505 1.068921 CACTTTGCCCCGGTTTTGG 59.931 57.895 0.00 0.00 0.00 3.28
505 506 1.075896 ACTTTGCCCCGGTTTTGGA 60.076 52.632 0.00 0.00 0.00 3.53
506 507 0.688087 ACTTTGCCCCGGTTTTGGAA 60.688 50.000 0.00 0.00 0.00 3.53
507 508 0.033366 CTTTGCCCCGGTTTTGGAAG 59.967 55.000 0.00 0.00 0.00 3.46
508 509 0.397254 TTTGCCCCGGTTTTGGAAGA 60.397 50.000 0.00 0.00 0.00 2.87
509 510 0.397254 TTGCCCCGGTTTTGGAAGAA 60.397 50.000 0.00 0.00 0.00 2.52
510 511 0.397254 TGCCCCGGTTTTGGAAGAAA 60.397 50.000 0.00 0.00 0.00 2.52
511 512 0.317160 GCCCCGGTTTTGGAAGAAAG 59.683 55.000 0.00 0.00 0.00 2.62
512 513 1.699730 CCCCGGTTTTGGAAGAAAGT 58.300 50.000 0.00 0.00 0.00 2.66
513 514 2.036387 CCCCGGTTTTGGAAGAAAGTT 58.964 47.619 0.00 0.00 0.00 2.66
514 515 3.224269 CCCCGGTTTTGGAAGAAAGTTA 58.776 45.455 0.00 0.00 0.00 2.24
515 516 3.005050 CCCCGGTTTTGGAAGAAAGTTAC 59.995 47.826 0.00 0.00 0.00 2.50
516 517 3.887110 CCCGGTTTTGGAAGAAAGTTACT 59.113 43.478 0.00 0.00 0.00 2.24
517 518 4.023450 CCCGGTTTTGGAAGAAAGTTACTC 60.023 45.833 0.00 0.00 0.00 2.59
518 519 4.319261 CCGGTTTTGGAAGAAAGTTACTCG 60.319 45.833 0.00 0.00 0.00 4.18
519 520 4.319261 CGGTTTTGGAAGAAAGTTACTCGG 60.319 45.833 0.00 0.00 0.00 4.63
520 521 4.577693 GGTTTTGGAAGAAAGTTACTCGGT 59.422 41.667 0.00 0.00 0.00 4.69
521 522 5.066893 GGTTTTGGAAGAAAGTTACTCGGTT 59.933 40.000 0.00 0.00 0.00 4.44
522 523 6.260714 GGTTTTGGAAGAAAGTTACTCGGTTA 59.739 38.462 0.00 0.00 0.00 2.85
523 524 7.040892 GGTTTTGGAAGAAAGTTACTCGGTTAT 60.041 37.037 0.00 0.00 0.00 1.89
524 525 7.429636 TTTGGAAGAAAGTTACTCGGTTATG 57.570 36.000 0.00 0.00 0.00 1.90
525 526 6.349243 TGGAAGAAAGTTACTCGGTTATGA 57.651 37.500 0.00 0.00 0.00 2.15
526 527 6.395629 TGGAAGAAAGTTACTCGGTTATGAG 58.604 40.000 0.00 0.00 41.86 2.90
527 528 6.209986 TGGAAGAAAGTTACTCGGTTATGAGA 59.790 38.462 0.00 0.00 39.35 3.27
528 529 6.530887 GGAAGAAAGTTACTCGGTTATGAGAC 59.469 42.308 0.00 0.00 39.35 3.36
529 530 6.837471 AGAAAGTTACTCGGTTATGAGACT 57.163 37.500 0.00 0.00 39.35 3.24
530 531 6.622549 AGAAAGTTACTCGGTTATGAGACTG 58.377 40.000 0.00 0.00 39.35 3.51
531 532 4.985538 AGTTACTCGGTTATGAGACTGG 57.014 45.455 0.00 0.00 39.35 4.00
532 533 4.597004 AGTTACTCGGTTATGAGACTGGA 58.403 43.478 0.00 0.00 39.35 3.86
533 534 4.641094 AGTTACTCGGTTATGAGACTGGAG 59.359 45.833 0.00 0.00 39.35 3.86
534 535 2.379972 ACTCGGTTATGAGACTGGAGG 58.620 52.381 0.00 0.00 39.35 4.30
535 536 1.683917 CTCGGTTATGAGACTGGAGGG 59.316 57.143 0.00 0.00 38.28 4.30
536 537 0.753262 CGGTTATGAGACTGGAGGGG 59.247 60.000 0.00 0.00 0.00 4.79
537 538 1.880941 GGTTATGAGACTGGAGGGGT 58.119 55.000 0.00 0.00 0.00 4.95
538 539 1.763545 GGTTATGAGACTGGAGGGGTC 59.236 57.143 0.00 0.00 0.00 4.46
539 540 2.467880 GTTATGAGACTGGAGGGGTCA 58.532 52.381 0.00 0.00 36.29 4.02
540 541 2.838202 GTTATGAGACTGGAGGGGTCAA 59.162 50.000 0.00 0.00 36.29 3.18
541 542 2.044793 ATGAGACTGGAGGGGTCAAA 57.955 50.000 0.00 0.00 36.29 2.69
542 543 2.044793 TGAGACTGGAGGGGTCAAAT 57.955 50.000 0.00 0.00 36.29 2.32
543 544 1.630369 TGAGACTGGAGGGGTCAAATG 59.370 52.381 0.00 0.00 36.29 2.32
544 545 1.630878 GAGACTGGAGGGGTCAAATGT 59.369 52.381 0.00 0.00 36.29 2.71
545 546 1.630878 AGACTGGAGGGGTCAAATGTC 59.369 52.381 0.00 0.00 36.29 3.06
546 547 0.324943 ACTGGAGGGGTCAAATGTCG 59.675 55.000 0.00 0.00 0.00 4.35
547 548 1.002624 TGGAGGGGTCAAATGTCGC 60.003 57.895 0.00 0.00 0.00 5.19
548 549 1.299976 GGAGGGGTCAAATGTCGCT 59.700 57.895 0.00 0.00 0.00 4.93
549 550 0.744771 GGAGGGGTCAAATGTCGCTC 60.745 60.000 11.73 11.73 39.00 5.03
550 551 1.079127 AGGGGTCAAATGTCGCTCG 60.079 57.895 0.00 0.00 0.00 5.03
551 552 1.079405 GGGGTCAAATGTCGCTCGA 60.079 57.895 0.00 0.00 0.00 4.04
552 553 0.672401 GGGGTCAAATGTCGCTCGAA 60.672 55.000 0.00 0.00 0.00 3.71
553 554 1.153353 GGGTCAAATGTCGCTCGAAA 58.847 50.000 0.00 0.00 0.00 3.46
554 555 1.533731 GGGTCAAATGTCGCTCGAAAA 59.466 47.619 0.00 0.00 0.00 2.29
555 556 2.161609 GGGTCAAATGTCGCTCGAAAAT 59.838 45.455 0.00 0.00 0.00 1.82
556 557 3.365969 GGGTCAAATGTCGCTCGAAAATT 60.366 43.478 0.00 0.00 0.00 1.82
557 558 3.846335 GGTCAAATGTCGCTCGAAAATTC 59.154 43.478 0.00 0.00 0.00 2.17
558 559 4.378459 GGTCAAATGTCGCTCGAAAATTCT 60.378 41.667 0.00 0.00 0.00 2.40
559 560 5.147162 GTCAAATGTCGCTCGAAAATTCTT 58.853 37.500 0.00 0.00 0.00 2.52
560 561 5.058492 GTCAAATGTCGCTCGAAAATTCTTG 59.942 40.000 0.00 0.00 0.00 3.02
561 562 5.049749 TCAAATGTCGCTCGAAAATTCTTGA 60.050 36.000 0.00 0.00 0.00 3.02
562 563 4.590400 ATGTCGCTCGAAAATTCTTGAG 57.410 40.909 0.00 0.00 0.00 3.02
563 564 2.736721 TGTCGCTCGAAAATTCTTGAGG 59.263 45.455 0.00 0.00 0.00 3.86
564 565 1.732259 TCGCTCGAAAATTCTTGAGGC 59.268 47.619 0.00 0.00 0.00 4.70
565 566 1.464608 CGCTCGAAAATTCTTGAGGCA 59.535 47.619 0.00 0.00 0.00 4.75
566 567 2.726066 CGCTCGAAAATTCTTGAGGCAC 60.726 50.000 0.00 0.00 0.00 5.01
567 568 2.414691 GCTCGAAAATTCTTGAGGCACC 60.415 50.000 0.00 0.00 0.00 5.01
568 569 2.813754 CTCGAAAATTCTTGAGGCACCA 59.186 45.455 0.00 0.00 0.00 4.17
569 570 2.813754 TCGAAAATTCTTGAGGCACCAG 59.186 45.455 0.00 0.00 0.00 4.00
570 571 2.813754 CGAAAATTCTTGAGGCACCAGA 59.186 45.455 0.00 0.00 0.00 3.86
571 572 3.441572 CGAAAATTCTTGAGGCACCAGAT 59.558 43.478 0.00 0.00 0.00 2.90
572 573 4.673580 CGAAAATTCTTGAGGCACCAGATG 60.674 45.833 0.00 0.00 0.00 2.90
573 574 3.446442 AATTCTTGAGGCACCAGATGT 57.554 42.857 0.00 0.00 0.00 3.06
574 575 4.574674 AATTCTTGAGGCACCAGATGTA 57.425 40.909 0.00 0.00 0.00 2.29
575 576 3.616956 TTCTTGAGGCACCAGATGTAG 57.383 47.619 0.00 0.00 0.00 2.74
576 577 2.820178 TCTTGAGGCACCAGATGTAGA 58.180 47.619 0.00 0.00 0.00 2.59
577 578 2.497675 TCTTGAGGCACCAGATGTAGAC 59.502 50.000 0.00 0.00 0.00 2.59
578 579 2.238084 TGAGGCACCAGATGTAGACT 57.762 50.000 0.00 0.00 0.00 3.24
579 580 2.540383 TGAGGCACCAGATGTAGACTT 58.460 47.619 0.00 0.00 0.00 3.01
580 581 2.906389 TGAGGCACCAGATGTAGACTTT 59.094 45.455 0.00 0.00 0.00 2.66
581 582 3.327757 TGAGGCACCAGATGTAGACTTTT 59.672 43.478 0.00 0.00 0.00 2.27
582 583 3.679389 AGGCACCAGATGTAGACTTTTG 58.321 45.455 0.00 0.00 0.00 2.44
583 584 2.749621 GGCACCAGATGTAGACTTTTGG 59.250 50.000 4.19 4.19 33.32 3.28
584 585 3.559171 GGCACCAGATGTAGACTTTTGGA 60.559 47.826 10.89 0.00 32.06 3.53
585 586 3.686726 GCACCAGATGTAGACTTTTGGAG 59.313 47.826 10.89 5.51 32.06 3.86
586 587 4.563580 GCACCAGATGTAGACTTTTGGAGA 60.564 45.833 10.89 0.00 32.06 3.71
587 588 5.551233 CACCAGATGTAGACTTTTGGAGAA 58.449 41.667 10.89 0.00 32.06 2.87
588 589 5.409826 CACCAGATGTAGACTTTTGGAGAAC 59.590 44.000 10.89 0.00 32.06 3.01
589 590 5.308237 ACCAGATGTAGACTTTTGGAGAACT 59.692 40.000 10.89 0.00 32.06 3.01
590 591 6.183361 ACCAGATGTAGACTTTTGGAGAACTT 60.183 38.462 10.89 0.00 32.06 2.66
591 592 6.148480 CCAGATGTAGACTTTTGGAGAACTTG 59.852 42.308 0.20 0.00 29.99 3.16
592 593 6.931281 CAGATGTAGACTTTTGGAGAACTTGA 59.069 38.462 0.00 0.00 0.00 3.02
593 594 7.117523 CAGATGTAGACTTTTGGAGAACTTGAG 59.882 40.741 0.00 0.00 0.00 3.02
594 595 6.479972 TGTAGACTTTTGGAGAACTTGAGA 57.520 37.500 0.00 0.00 0.00 3.27
595 596 6.516718 TGTAGACTTTTGGAGAACTTGAGAG 58.483 40.000 0.00 0.00 0.00 3.20
596 597 5.878406 AGACTTTTGGAGAACTTGAGAGA 57.122 39.130 0.00 0.00 0.00 3.10
597 598 5.606505 AGACTTTTGGAGAACTTGAGAGAC 58.393 41.667 0.00 0.00 0.00 3.36
598 599 4.709250 ACTTTTGGAGAACTTGAGAGACC 58.291 43.478 0.00 0.00 0.00 3.85
599 600 4.164221 ACTTTTGGAGAACTTGAGAGACCA 59.836 41.667 0.00 0.00 0.00 4.02
600 601 4.771114 TTTGGAGAACTTGAGAGACCAA 57.229 40.909 0.00 0.00 34.76 3.67
601 602 4.771114 TTGGAGAACTTGAGAGACCAAA 57.229 40.909 0.00 0.00 33.86 3.28
602 603 4.771114 TGGAGAACTTGAGAGACCAAAA 57.229 40.909 0.00 0.00 0.00 2.44
603 604 5.110814 TGGAGAACTTGAGAGACCAAAAA 57.889 39.130 0.00 0.00 0.00 1.94
604 605 5.694995 TGGAGAACTTGAGAGACCAAAAAT 58.305 37.500 0.00 0.00 0.00 1.82
605 606 6.837312 TGGAGAACTTGAGAGACCAAAAATA 58.163 36.000 0.00 0.00 0.00 1.40
606 607 7.461749 TGGAGAACTTGAGAGACCAAAAATAT 58.538 34.615 0.00 0.00 0.00 1.28
607 608 8.602424 TGGAGAACTTGAGAGACCAAAAATATA 58.398 33.333 0.00 0.00 0.00 0.86
608 609 9.620259 GGAGAACTTGAGAGACCAAAAATATAT 57.380 33.333 0.00 0.00 0.00 0.86
633 634 9.612066 ATTTTTCTCCTTTTTAAAAGTGATGCA 57.388 25.926 15.19 0.00 0.00 3.96
634 635 9.612066 TTTTTCTCCTTTTTAAAAGTGATGCAT 57.388 25.926 15.19 0.00 0.00 3.96
635 636 9.612066 TTTTCTCCTTTTTAAAAGTGATGCATT 57.388 25.926 15.19 0.00 0.00 3.56
636 637 9.612066 TTTCTCCTTTTTAAAAGTGATGCATTT 57.388 25.926 15.19 0.00 0.00 2.32
637 638 9.612066 TTCTCCTTTTTAAAAGTGATGCATTTT 57.388 25.926 15.19 0.29 33.42 1.82
638 639 9.612066 TCTCCTTTTTAAAAGTGATGCATTTTT 57.388 25.926 15.19 6.73 37.17 1.94
665 666 9.788960 TTGGGTGCATTTTGTTTTAAAATAAAC 57.211 25.926 18.86 10.25 38.26 2.01
666 667 8.956426 TGGGTGCATTTTGTTTTAAAATAAACA 58.044 25.926 18.86 12.71 44.01 2.83
667 668 9.958234 GGGTGCATTTTGTTTTAAAATAAACAT 57.042 25.926 18.86 13.57 44.76 2.71
722 723 6.805016 AGATGATGGTCAGAAATCTACTGT 57.195 37.500 0.00 0.00 36.81 3.55
723 724 7.904558 AGATGATGGTCAGAAATCTACTGTA 57.095 36.000 0.00 0.00 36.81 2.74
724 725 8.311395 AGATGATGGTCAGAAATCTACTGTAA 57.689 34.615 0.00 0.00 36.81 2.41
725 726 8.932610 AGATGATGGTCAGAAATCTACTGTAAT 58.067 33.333 0.00 0.00 36.81 1.89
776 777 0.111061 GGTCTGCATGCATATCCCCA 59.889 55.000 22.97 0.00 0.00 4.96
799 800 6.072673 CCACCTATTTTTACTCTTCACCACAC 60.073 42.308 0.00 0.00 0.00 3.82
801 802 6.485648 ACCTATTTTTACTCTTCACCACACAC 59.514 38.462 0.00 0.00 0.00 3.82
839 840 3.399440 AAGCAAGGATGGATCGATCTC 57.601 47.619 23.96 14.71 0.00 2.75
894 895 0.923403 CATGCACCACATACTCGTCG 59.077 55.000 0.00 0.00 36.64 5.12
986 1070 2.121948 TCTCATCAGGTAGCCAGCAAT 58.878 47.619 0.00 0.00 0.00 3.56
988 1072 2.877168 CTCATCAGGTAGCCAGCAATTC 59.123 50.000 0.00 0.00 0.00 2.17
989 1073 1.952296 CATCAGGTAGCCAGCAATTCC 59.048 52.381 0.00 0.00 0.00 3.01
990 1074 0.107703 TCAGGTAGCCAGCAATTCCG 60.108 55.000 0.00 0.00 0.00 4.30
1175 1266 0.591741 GGCGACATCGTCCGTAAGAG 60.592 60.000 2.85 0.00 42.22 2.85
1187 1278 4.124351 TAAGAGCCGCCCGTCGTG 62.124 66.667 0.00 0.00 36.19 4.35
1190 1281 4.424566 GAGCCGCCCGTCGTGTTA 62.425 66.667 0.00 0.00 36.19 2.41
1191 1282 3.919973 GAGCCGCCCGTCGTGTTAA 62.920 63.158 0.00 0.00 36.19 2.01
1197 1288 1.834458 GCCCGTCGTGTTAACACCAC 61.834 60.000 28.43 25.20 43.66 4.16
1201 1292 1.004715 CGTCGTGTTAACACCACCAAC 60.005 52.381 28.43 18.19 43.66 3.77
1202 1293 2.282407 GTCGTGTTAACACCACCAACT 58.718 47.619 28.43 0.00 43.66 3.16
1203 1294 2.286025 GTCGTGTTAACACCACCAACTC 59.714 50.000 28.43 5.24 43.66 3.01
1204 1295 1.259507 CGTGTTAACACCACCAACTCG 59.740 52.381 28.43 12.94 43.66 4.18
1205 1296 2.282407 GTGTTAACACCACCAACTCGT 58.718 47.619 25.31 0.00 40.85 4.18
1206 1297 2.679336 GTGTTAACACCACCAACTCGTT 59.321 45.455 25.31 0.00 40.85 3.85
1207 1298 2.937799 TGTTAACACCACCAACTCGTTC 59.062 45.455 3.59 0.00 0.00 3.95
1208 1299 2.937799 GTTAACACCACCAACTCGTTCA 59.062 45.455 0.00 0.00 0.00 3.18
1209 1300 2.341846 AACACCACCAACTCGTTCAT 57.658 45.000 0.00 0.00 0.00 2.57
1210 1301 1.878953 ACACCACCAACTCGTTCATC 58.121 50.000 0.00 0.00 0.00 2.92
1211 1302 0.790207 CACCACCAACTCGTTCATCG 59.210 55.000 0.00 0.00 41.41 3.84
1212 1303 0.320421 ACCACCAACTCGTTCATCGG 60.320 55.000 0.00 0.00 40.32 4.18
1213 1304 1.635663 CCACCAACTCGTTCATCGGC 61.636 60.000 0.00 0.00 40.32 5.54
1214 1305 1.736645 ACCAACTCGTTCATCGGCG 60.737 57.895 0.00 0.00 40.32 6.46
1320 2109 1.741770 GTGATGGTGGTGACGGAGC 60.742 63.158 0.00 0.00 0.00 4.70
1337 2249 0.843984 AGCAGGGGTACAACAAGTGT 59.156 50.000 0.00 0.00 44.82 3.55
1594 3790 7.042051 GCCTCTTCTTGTTATGCACGATATTTA 60.042 37.037 0.00 0.00 0.00 1.40
1677 3875 5.989477 TCATTCCATGTATTCTCGGTTCTT 58.011 37.500 0.00 0.00 0.00 2.52
1795 3997 6.712241 GCATATTGCAGTTCGTATGTCTAT 57.288 37.500 0.00 0.00 44.26 1.98
1843 4045 6.202954 AGACTAGACAAGTAACATGTGTTTGC 59.797 38.462 0.00 2.13 39.07 3.68
1892 4197 7.336931 GTGACAAATGGTTCTGTAATATGGACT 59.663 37.037 0.00 0.00 0.00 3.85
1897 4202 9.574516 AAATGGTTCTGTAATATGGACTAATCC 57.425 33.333 0.00 0.00 46.48 3.01
1937 4276 1.517242 ACTTGCTCCTTCTTTCTGCG 58.483 50.000 0.00 0.00 0.00 5.18
1942 4281 1.012841 CTCCTTCTTTCTGCGGCATC 58.987 55.000 1.75 0.00 0.00 3.91
1955 4294 2.107953 GCATCTCCTCCGCTGGAC 59.892 66.667 0.00 0.00 31.94 4.02
1996 4380 0.030908 CATCCTCCGCTCCGTTAGTC 59.969 60.000 0.00 0.00 0.00 2.59
2014 4499 1.953138 CAGTCGCCATGGATCTCGC 60.953 63.158 18.40 5.92 0.00 5.03
2019 4504 2.501128 CCATGGATCTCGCGGTGT 59.499 61.111 5.56 0.00 0.00 4.16
2022 4507 0.385751 CATGGATCTCGCGGTGTAGT 59.614 55.000 6.13 0.00 0.00 2.73
2024 4509 0.892755 TGGATCTCGCGGTGTAGTTT 59.107 50.000 6.13 0.00 0.00 2.66
2027 4512 0.739813 ATCTCGCGGTGTAGTTTGGC 60.740 55.000 6.13 0.00 0.00 4.52
2041 4526 0.698818 TTTGGCCCTCCTCCTTCTTC 59.301 55.000 0.00 0.00 0.00 2.87
2042 4527 1.208165 TTGGCCCTCCTCCTTCTTCC 61.208 60.000 0.00 0.00 0.00 3.46
2049 4534 2.621929 CCTCCTCCTTCTTCCTCTTCGA 60.622 54.545 0.00 0.00 0.00 3.71
2054 4818 2.826725 TCCTTCTTCCTCTTCGACCTTC 59.173 50.000 0.00 0.00 0.00 3.46
2105 4869 0.753262 TTGCTCCTATCCTTCGCCTC 59.247 55.000 0.00 0.00 0.00 4.70
2112 4876 1.613925 CTATCCTTCGCCTCGGATCAA 59.386 52.381 0.00 0.00 40.40 2.57
2116 4880 0.460987 CTTCGCCTCGGATCAAGCTT 60.461 55.000 0.00 0.00 0.00 3.74
2117 4881 0.821517 TTCGCCTCGGATCAAGCTTA 59.178 50.000 0.00 0.00 0.00 3.09
2138 4902 2.095461 GGAGCTCAAAATGGAGGTTCC 58.905 52.381 17.19 0.00 45.03 3.62
2140 4904 3.013219 GAGCTCAAAATGGAGGTTCCTC 58.987 50.000 9.40 10.13 45.03 3.71
2143 4907 1.073125 TCAAAATGGAGGTTCCTCGCA 59.927 47.619 12.01 11.26 37.46 5.10
2146 4910 0.250513 AATGGAGGTTCCTCGCAGTC 59.749 55.000 12.01 0.00 37.46 3.51
2149 4913 0.390472 GGAGGTTCCTCGCAGTCTTG 60.390 60.000 12.01 0.00 32.53 3.02
2173 4945 3.878778 CTCGAGGAAGATGGTGGAAAAT 58.121 45.455 3.91 0.00 0.00 1.82
2191 4963 0.401738 ATAGGCCCATTGTCATCCGG 59.598 55.000 0.00 0.00 0.00 5.14
2192 4964 0.986019 TAGGCCCATTGTCATCCGGT 60.986 55.000 0.00 0.00 0.00 5.28
2193 4965 1.823899 GGCCCATTGTCATCCGGTC 60.824 63.158 0.00 0.00 0.00 4.79
2194 4966 1.823899 GCCCATTGTCATCCGGTCC 60.824 63.158 0.00 0.00 0.00 4.46
2195 4967 1.523711 CCCATTGTCATCCGGTCCG 60.524 63.158 3.60 3.60 0.00 4.79
2208 4980 1.539496 CCGGTCCGACTCAAACTTTGA 60.539 52.381 14.39 4.16 38.17 2.69
2236 5008 5.945144 TTAGTTTAGGGAGGTGTGGTATC 57.055 43.478 0.00 0.00 0.00 2.24
2239 5011 5.596763 AGTTTAGGGAGGTGTGGTATCTTA 58.403 41.667 0.00 0.00 0.00 2.10
2242 5014 7.509659 AGTTTAGGGAGGTGTGGTATCTTATAG 59.490 40.741 0.00 0.00 0.00 1.31
2246 5018 3.838903 GAGGTGTGGTATCTTATAGGGGG 59.161 52.174 0.00 0.00 0.00 5.40
2283 5057 4.321230 CCTTAGAAGTGAAAATGCCACCAC 60.321 45.833 0.00 0.00 35.23 4.16
2290 5064 2.158475 TGAAAATGCCACCACCTCTTCT 60.158 45.455 0.00 0.00 0.00 2.85
2294 5068 0.108585 TGCCACCACCTCTTCTTCAC 59.891 55.000 0.00 0.00 0.00 3.18
2303 5077 2.900546 ACCTCTTCTTCACGTTCTCCAT 59.099 45.455 0.00 0.00 0.00 3.41
2310 5084 1.781555 CACGTTCTCCATGACGTGC 59.218 57.895 20.39 0.00 46.81 5.34
2345 5119 6.093219 ACAGATTGTGATTAGCATGTTGAGAC 59.907 38.462 0.00 0.00 0.00 3.36
2351 5125 6.758416 TGTGATTAGCATGTTGAGACATACTC 59.242 38.462 0.00 0.00 44.55 2.59
2355 5129 3.133721 AGCATGTTGAGACATACTCCCTC 59.866 47.826 0.00 0.00 44.55 4.30
2356 5130 3.742640 GCATGTTGAGACATACTCCCTCC 60.743 52.174 0.00 0.00 44.55 4.30
2357 5131 3.184382 TGTTGAGACATACTCCCTCCA 57.816 47.619 0.00 0.00 44.34 3.86
2358 5132 2.832129 TGTTGAGACATACTCCCTCCAC 59.168 50.000 0.00 0.00 44.34 4.02
2359 5133 2.160721 TGAGACATACTCCCTCCACC 57.839 55.000 0.00 0.00 44.34 4.61
2360 5134 1.343075 TGAGACATACTCCCTCCACCC 60.343 57.143 0.00 0.00 44.34 4.61
2361 5135 0.031010 AGACATACTCCCTCCACCCC 60.031 60.000 0.00 0.00 0.00 4.95
2363 5137 1.075525 CATACTCCCTCCACCCCGA 60.076 63.158 0.00 0.00 0.00 5.14
2364 5138 1.115930 CATACTCCCTCCACCCCGAG 61.116 65.000 0.00 0.00 0.00 4.63
2365 5139 2.948801 ATACTCCCTCCACCCCGAGC 62.949 65.000 0.00 0.00 0.00 5.03
2370 5144 4.436998 CTCCACCCCGAGCGTGTC 62.437 72.222 0.00 0.00 0.00 3.67
2371 5145 4.988716 TCCACCCCGAGCGTGTCT 62.989 66.667 0.00 0.00 0.00 3.41
2372 5146 3.066190 CCACCCCGAGCGTGTCTA 61.066 66.667 0.00 0.00 0.00 2.59
2373 5147 2.490217 CACCCCGAGCGTGTCTAG 59.510 66.667 0.00 0.00 0.00 2.43
2374 5148 2.044555 CACCCCGAGCGTGTCTAGA 61.045 63.158 0.00 0.00 0.00 2.43
2375 5149 1.076923 ACCCCGAGCGTGTCTAGAT 60.077 57.895 0.00 0.00 0.00 1.98
2376 5150 0.182061 ACCCCGAGCGTGTCTAGATA 59.818 55.000 0.00 0.00 0.00 1.98
2377 5151 0.592148 CCCCGAGCGTGTCTAGATAC 59.408 60.000 9.46 9.46 0.00 2.24
2378 5152 1.306148 CCCGAGCGTGTCTAGATACA 58.694 55.000 18.39 0.27 0.00 2.29
2379 5153 1.880675 CCCGAGCGTGTCTAGATACAT 59.119 52.381 18.39 7.17 0.00 2.29
2381 5155 2.809119 CCGAGCGTGTCTAGATACATCT 59.191 50.000 18.39 13.90 40.86 2.90
2408 5182 9.014297 AGACAAATCTAAGACAAGTAATTTGGG 57.986 33.333 9.60 0.00 38.04 4.12
2410 5184 8.793592 ACAAATCTAAGACAAGTAATTTGGGAC 58.206 33.333 9.60 0.00 41.25 4.46
2411 5185 7.611213 AATCTAAGACAAGTAATTTGGGACG 57.389 36.000 0.00 0.00 41.25 4.79
2412 5186 5.484715 TCTAAGACAAGTAATTTGGGACGG 58.515 41.667 0.00 0.00 41.25 4.79
2413 5187 4.360951 AAGACAAGTAATTTGGGACGGA 57.639 40.909 0.00 0.00 41.25 4.69
2414 5188 3.939066 AGACAAGTAATTTGGGACGGAG 58.061 45.455 0.00 0.00 41.25 4.63
2415 5189 3.581332 AGACAAGTAATTTGGGACGGAGA 59.419 43.478 0.00 0.00 41.25 3.71
2416 5190 4.225267 AGACAAGTAATTTGGGACGGAGAT 59.775 41.667 0.00 0.00 41.25 2.75
2417 5191 5.424252 AGACAAGTAATTTGGGACGGAGATA 59.576 40.000 0.00 0.00 41.25 1.98
2418 5192 6.057321 ACAAGTAATTTGGGACGGAGATAA 57.943 37.500 0.00 0.00 41.25 1.75
2419 5193 6.659824 ACAAGTAATTTGGGACGGAGATAAT 58.340 36.000 0.00 0.00 41.25 1.28
2420 5194 7.798071 ACAAGTAATTTGGGACGGAGATAATA 58.202 34.615 0.00 0.00 41.25 0.98
2421 5195 7.931948 ACAAGTAATTTGGGACGGAGATAATAG 59.068 37.037 0.00 0.00 41.25 1.73
2426 5200 7.613551 ATTTGGGACGGAGATAATAGTAGTT 57.386 36.000 0.00 0.00 0.00 2.24
2427 5201 8.716674 ATTTGGGACGGAGATAATAGTAGTTA 57.283 34.615 0.00 0.00 0.00 2.24
2430 5204 7.520798 TGGGACGGAGATAATAGTAGTTAAGA 58.479 38.462 0.00 0.00 0.00 2.10
2463 5237 4.439253 AACTATAAATGGCACCCCTCTC 57.561 45.455 0.00 0.00 0.00 3.20
2464 5238 3.669949 ACTATAAATGGCACCCCTCTCT 58.330 45.455 0.00 0.00 0.00 3.10
2465 5239 3.392616 ACTATAAATGGCACCCCTCTCTG 59.607 47.826 0.00 0.00 0.00 3.35
2479 5253 2.099921 CCTCTCTGGGTACATCGAGTTG 59.900 54.545 0.00 0.00 0.00 3.16
2482 5256 3.945921 TCTCTGGGTACATCGAGTTGTAG 59.054 47.826 0.00 0.00 32.92 2.74
2483 5257 3.693807 TCTGGGTACATCGAGTTGTAGT 58.306 45.455 0.00 0.00 32.92 2.73
2484 5258 4.084287 TCTGGGTACATCGAGTTGTAGTT 58.916 43.478 0.00 0.00 32.92 2.24
2486 5260 5.356190 TCTGGGTACATCGAGTTGTAGTTAG 59.644 44.000 0.00 0.00 32.92 2.34
2488 5262 5.356190 TGGGTACATCGAGTTGTAGTTAGAG 59.644 44.000 0.00 0.00 32.92 2.43
2489 5263 5.272397 GGTACATCGAGTTGTAGTTAGAGC 58.728 45.833 0.00 0.00 32.92 4.09
2491 5265 5.584253 ACATCGAGTTGTAGTTAGAGCAT 57.416 39.130 0.00 0.00 0.00 3.79
2507 5281 4.644163 GAGCATCTCTACTAGACCCCTA 57.356 50.000 0.00 0.00 36.93 3.53
2508 5282 4.329392 GAGCATCTCTACTAGACCCCTAC 58.671 52.174 0.00 0.00 36.93 3.18
2510 5284 3.815036 GCATCTCTACTAGACCCCTACCC 60.815 56.522 0.00 0.00 36.93 3.69
2511 5285 3.451677 TCTCTACTAGACCCCTACCCT 57.548 52.381 0.00 0.00 0.00 4.34
2512 5286 4.583258 TCTCTACTAGACCCCTACCCTA 57.417 50.000 0.00 0.00 0.00 3.53
2514 5288 4.173647 TCTCTACTAGACCCCTACCCTAGA 59.826 50.000 0.00 0.00 35.21 2.43
2515 5289 4.912744 CTCTACTAGACCCCTACCCTAGAA 59.087 50.000 0.00 0.00 35.21 2.10
2516 5290 4.912744 TCTACTAGACCCCTACCCTAGAAG 59.087 50.000 0.00 0.00 35.21 2.85
2517 5291 3.483083 ACTAGACCCCTACCCTAGAAGT 58.517 50.000 0.00 0.00 35.21 3.01
2518 5292 3.462954 ACTAGACCCCTACCCTAGAAGTC 59.537 52.174 0.00 0.00 35.21 3.01
2519 5293 1.574821 AGACCCCTACCCTAGAAGTCC 59.425 57.143 0.00 0.00 31.82 3.85
2520 5294 1.290130 GACCCCTACCCTAGAAGTCCA 59.710 57.143 0.00 0.00 0.00 4.02
2521 5295 1.726352 ACCCCTACCCTAGAAGTCCAA 59.274 52.381 0.00 0.00 0.00 3.53
2522 5296 2.114871 ACCCCTACCCTAGAAGTCCAAA 59.885 50.000 0.00 0.00 0.00 3.28
2523 5297 3.187112 CCCCTACCCTAGAAGTCCAAAA 58.813 50.000 0.00 0.00 0.00 2.44
2524 5298 3.054582 CCCCTACCCTAGAAGTCCAAAAC 60.055 52.174 0.00 0.00 0.00 2.43
2525 5299 3.054582 CCCTACCCTAGAAGTCCAAAACC 60.055 52.174 0.00 0.00 0.00 3.27
2526 5300 3.844804 CCTACCCTAGAAGTCCAAAACCT 59.155 47.826 0.00 0.00 0.00 3.50
2527 5301 4.288887 CCTACCCTAGAAGTCCAAAACCTT 59.711 45.833 0.00 0.00 0.00 3.50
2528 5302 4.368565 ACCCTAGAAGTCCAAAACCTTC 57.631 45.455 0.00 0.00 0.00 3.46
2529 5303 3.981375 ACCCTAGAAGTCCAAAACCTTCT 59.019 43.478 7.06 7.06 39.23 2.85
2530 5304 4.041815 ACCCTAGAAGTCCAAAACCTTCTC 59.958 45.833 5.27 0.00 37.37 2.87
2531 5305 4.565861 CCCTAGAAGTCCAAAACCTTCTCC 60.566 50.000 5.27 0.00 37.37 3.71
2532 5306 3.510531 AGAAGTCCAAAACCTTCTCCC 57.489 47.619 0.00 0.00 31.32 4.30
2533 5307 3.056832 AGAAGTCCAAAACCTTCTCCCT 58.943 45.455 0.00 0.00 31.32 4.20
2534 5308 4.240323 AGAAGTCCAAAACCTTCTCCCTA 58.760 43.478 0.00 0.00 31.32 3.53
2535 5309 4.041815 AGAAGTCCAAAACCTTCTCCCTAC 59.958 45.833 0.00 0.00 31.32 3.18
2536 5310 2.643304 AGTCCAAAACCTTCTCCCTACC 59.357 50.000 0.00 0.00 0.00 3.18
2537 5311 1.990327 TCCAAAACCTTCTCCCTACCC 59.010 52.381 0.00 0.00 0.00 3.69
2538 5312 1.993301 CCAAAACCTTCTCCCTACCCT 59.007 52.381 0.00 0.00 0.00 4.34
2539 5313 2.290960 CCAAAACCTTCTCCCTACCCTG 60.291 54.545 0.00 0.00 0.00 4.45
2540 5314 2.375509 CAAAACCTTCTCCCTACCCTGT 59.624 50.000 0.00 0.00 0.00 4.00
2541 5315 2.435203 AACCTTCTCCCTACCCTGTT 57.565 50.000 0.00 0.00 0.00 3.16
2542 5316 2.435203 ACCTTCTCCCTACCCTGTTT 57.565 50.000 0.00 0.00 0.00 2.83
2543 5317 2.714808 ACCTTCTCCCTACCCTGTTTT 58.285 47.619 0.00 0.00 0.00 2.43
2544 5318 2.643304 ACCTTCTCCCTACCCTGTTTTC 59.357 50.000 0.00 0.00 0.00 2.29
2545 5319 2.026169 CCTTCTCCCTACCCTGTTTTCC 60.026 54.545 0.00 0.00 0.00 3.13
2546 5320 1.665137 TCTCCCTACCCTGTTTTCCC 58.335 55.000 0.00 0.00 0.00 3.97
2547 5321 0.624254 CTCCCTACCCTGTTTTCCCC 59.376 60.000 0.00 0.00 0.00 4.81
2548 5322 0.103823 TCCCTACCCTGTTTTCCCCA 60.104 55.000 0.00 0.00 0.00 4.96
2549 5323 0.781278 CCCTACCCTGTTTTCCCCAA 59.219 55.000 0.00 0.00 0.00 4.12
2550 5324 1.148236 CCCTACCCTGTTTTCCCCAAA 59.852 52.381 0.00 0.00 0.00 3.28
2551 5325 2.225522 CCCTACCCTGTTTTCCCCAAAT 60.226 50.000 0.00 0.00 0.00 2.32
2552 5326 3.516586 CCTACCCTGTTTTCCCCAAATT 58.483 45.455 0.00 0.00 0.00 1.82
2553 5327 3.260632 CCTACCCTGTTTTCCCCAAATTG 59.739 47.826 0.00 0.00 0.00 2.32
2554 5328 2.770447 ACCCTGTTTTCCCCAAATTGT 58.230 42.857 0.00 0.00 0.00 2.71
2555 5329 3.119319 ACCCTGTTTTCCCCAAATTGTT 58.881 40.909 0.00 0.00 0.00 2.83
2556 5330 3.525609 ACCCTGTTTTCCCCAAATTGTTT 59.474 39.130 0.00 0.00 0.00 2.83
2557 5331 4.017958 ACCCTGTTTTCCCCAAATTGTTTT 60.018 37.500 0.00 0.00 0.00 2.43
2558 5332 5.191921 ACCCTGTTTTCCCCAAATTGTTTTA 59.808 36.000 0.00 0.00 0.00 1.52
2559 5333 5.762711 CCCTGTTTTCCCCAAATTGTTTTAG 59.237 40.000 0.00 0.00 0.00 1.85
2560 5334 5.762711 CCTGTTTTCCCCAAATTGTTTTAGG 59.237 40.000 0.00 0.00 0.00 2.69
2561 5335 5.126779 TGTTTTCCCCAAATTGTTTTAGGC 58.873 37.500 0.00 0.00 0.00 3.93
2562 5336 5.126779 GTTTTCCCCAAATTGTTTTAGGCA 58.873 37.500 0.00 0.00 0.00 4.75
2563 5337 5.373812 TTTCCCCAAATTGTTTTAGGCAA 57.626 34.783 0.00 0.00 0.00 4.52
2564 5338 5.373812 TTCCCCAAATTGTTTTAGGCAAA 57.626 34.783 0.00 0.00 0.00 3.68
2565 5339 5.574970 TCCCCAAATTGTTTTAGGCAAAT 57.425 34.783 0.00 0.00 0.00 2.32
2566 5340 5.312079 TCCCCAAATTGTTTTAGGCAAATG 58.688 37.500 0.00 0.00 0.00 2.32
2567 5341 5.072329 TCCCCAAATTGTTTTAGGCAAATGA 59.928 36.000 0.00 0.00 0.00 2.57
2568 5342 5.945191 CCCCAAATTGTTTTAGGCAAATGAT 59.055 36.000 0.00 0.00 0.00 2.45
2569 5343 6.127952 CCCCAAATTGTTTTAGGCAAATGATG 60.128 38.462 0.00 0.00 0.00 3.07
2570 5344 6.430616 CCCAAATTGTTTTAGGCAAATGATGT 59.569 34.615 0.00 0.00 0.00 3.06
2571 5345 7.040548 CCCAAATTGTTTTAGGCAAATGATGTT 60.041 33.333 0.00 0.00 0.00 2.71
2572 5346 8.351461 CCAAATTGTTTTAGGCAAATGATGTTT 58.649 29.630 0.00 0.00 0.00 2.83
2573 5347 9.171701 CAAATTGTTTTAGGCAAATGATGTTTG 57.828 29.630 0.00 0.00 0.00 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.708734 GGGTTGTTGACGACGGCG 61.709 66.667 10.39 10.39 44.79 6.46
1 2 3.351416 GGGGTTGTTGACGACGGC 61.351 66.667 0.00 0.00 0.00 5.68
5 6 0.109179 CGTATCGGGGTTGTTGACGA 60.109 55.000 0.00 0.00 39.85 4.20
15 16 4.944372 GTCTGCGGCGTATCGGGG 62.944 72.222 9.37 0.00 0.00 5.73
16 17 3.709880 TTGTCTGCGGCGTATCGGG 62.710 63.158 9.37 0.00 0.00 5.14
17 18 2.202690 TTGTCTGCGGCGTATCGG 60.203 61.111 9.37 0.00 0.00 4.18
18 19 2.860628 GCTTGTCTGCGGCGTATCG 61.861 63.158 9.37 0.00 0.00 2.92
19 20 1.358725 TTGCTTGTCTGCGGCGTATC 61.359 55.000 9.37 0.79 35.36 2.24
20 21 1.375396 TTGCTTGTCTGCGGCGTAT 60.375 52.632 9.37 0.00 35.36 3.06
21 22 2.029815 TTGCTTGTCTGCGGCGTA 59.970 55.556 9.37 1.99 35.36 4.42
22 23 3.649986 GTTGCTTGTCTGCGGCGT 61.650 61.111 9.37 0.00 35.36 5.68
23 24 3.300667 GAGTTGCTTGTCTGCGGCG 62.301 63.158 0.51 0.51 35.36 6.46
24 25 1.963338 AGAGTTGCTTGTCTGCGGC 60.963 57.895 0.00 0.00 35.36 6.53
25 26 1.864862 CAGAGTTGCTTGTCTGCGG 59.135 57.895 0.00 0.00 34.15 5.69
36 37 0.877071 AGTTTGATGCGGCAGAGTTG 59.123 50.000 9.25 0.00 0.00 3.16
37 38 1.160137 GAGTTTGATGCGGCAGAGTT 58.840 50.000 9.25 0.00 0.00 3.01
38 39 0.674895 GGAGTTTGATGCGGCAGAGT 60.675 55.000 9.25 0.00 0.00 3.24
39 40 1.372087 GGGAGTTTGATGCGGCAGAG 61.372 60.000 9.25 0.00 0.00 3.35
40 41 1.377202 GGGAGTTTGATGCGGCAGA 60.377 57.895 9.25 0.00 0.00 4.26
41 42 1.033746 ATGGGAGTTTGATGCGGCAG 61.034 55.000 9.25 0.00 0.00 4.85
42 43 1.001020 ATGGGAGTTTGATGCGGCA 60.001 52.632 4.58 4.58 0.00 5.69
43 44 1.315257 ACATGGGAGTTTGATGCGGC 61.315 55.000 0.00 0.00 0.00 6.53
44 45 0.452987 CACATGGGAGTTTGATGCGG 59.547 55.000 0.00 0.00 0.00 5.69
45 46 0.452987 CCACATGGGAGTTTGATGCG 59.547 55.000 0.00 0.00 40.01 4.73
46 47 1.838112 TCCACATGGGAGTTTGATGC 58.162 50.000 0.00 0.00 42.15 3.91
64 65 0.035458 CCCGCACCCAAGGATCTATC 59.965 60.000 0.00 0.00 0.00 2.08
65 66 0.399949 TCCCGCACCCAAGGATCTAT 60.400 55.000 0.00 0.00 0.00 1.98
66 67 1.002403 TCCCGCACCCAAGGATCTA 59.998 57.895 0.00 0.00 0.00 1.98
67 68 2.285368 TCCCGCACCCAAGGATCT 60.285 61.111 0.00 0.00 0.00 2.75
68 69 2.190578 CTCCCGCACCCAAGGATC 59.809 66.667 0.00 0.00 0.00 3.36
69 70 2.610859 ACTCCCGCACCCAAGGAT 60.611 61.111 0.00 0.00 0.00 3.24
70 71 3.636231 CACTCCCGCACCCAAGGA 61.636 66.667 0.00 0.00 0.00 3.36
71 72 2.971598 ATCACTCCCGCACCCAAGG 61.972 63.158 0.00 0.00 0.00 3.61
72 73 1.746615 CATCACTCCCGCACCCAAG 60.747 63.158 0.00 0.00 0.00 3.61
73 74 2.350895 CATCACTCCCGCACCCAA 59.649 61.111 0.00 0.00 0.00 4.12
74 75 2.927856 ACATCACTCCCGCACCCA 60.928 61.111 0.00 0.00 0.00 4.51
75 76 2.436646 CACATCACTCCCGCACCC 60.437 66.667 0.00 0.00 0.00 4.61
76 77 2.436646 CCACATCACTCCCGCACC 60.437 66.667 0.00 0.00 0.00 5.01
77 78 2.034879 CACCACATCACTCCCGCAC 61.035 63.158 0.00 0.00 0.00 5.34
78 79 2.171209 CTCACCACATCACTCCCGCA 62.171 60.000 0.00 0.00 0.00 5.69
79 80 1.448540 CTCACCACATCACTCCCGC 60.449 63.158 0.00 0.00 0.00 6.13
80 81 1.219124 CCTCACCACATCACTCCCG 59.781 63.158 0.00 0.00 0.00 5.14
81 82 1.201429 ACCCTCACCACATCACTCCC 61.201 60.000 0.00 0.00 0.00 4.30
82 83 0.693049 AACCCTCACCACATCACTCC 59.307 55.000 0.00 0.00 0.00 3.85
83 84 1.611673 CCAACCCTCACCACATCACTC 60.612 57.143 0.00 0.00 0.00 3.51
84 85 0.401738 CCAACCCTCACCACATCACT 59.598 55.000 0.00 0.00 0.00 3.41
85 86 0.110486 ACCAACCCTCACCACATCAC 59.890 55.000 0.00 0.00 0.00 3.06
86 87 0.110295 CACCAACCCTCACCACATCA 59.890 55.000 0.00 0.00 0.00 3.07
87 88 0.609131 CCACCAACCCTCACCACATC 60.609 60.000 0.00 0.00 0.00 3.06
88 89 1.360393 ACCACCAACCCTCACCACAT 61.360 55.000 0.00 0.00 0.00 3.21
89 90 1.576368 AACCACCAACCCTCACCACA 61.576 55.000 0.00 0.00 0.00 4.17
90 91 1.106944 CAACCACCAACCCTCACCAC 61.107 60.000 0.00 0.00 0.00 4.16
91 92 1.228793 CAACCACCAACCCTCACCA 59.771 57.895 0.00 0.00 0.00 4.17
92 93 2.200337 GCAACCACCAACCCTCACC 61.200 63.158 0.00 0.00 0.00 4.02
93 94 2.551912 CGCAACCACCAACCCTCAC 61.552 63.158 0.00 0.00 0.00 3.51
94 95 2.203280 CGCAACCACCAACCCTCA 60.203 61.111 0.00 0.00 0.00 3.86
95 96 0.893727 ATTCGCAACCACCAACCCTC 60.894 55.000 0.00 0.00 0.00 4.30
96 97 1.152830 ATTCGCAACCACCAACCCT 59.847 52.632 0.00 0.00 0.00 4.34
97 98 1.288752 CATTCGCAACCACCAACCC 59.711 57.895 0.00 0.00 0.00 4.11
98 99 1.288752 CCATTCGCAACCACCAACC 59.711 57.895 0.00 0.00 0.00 3.77
99 100 1.068816 GTACCATTCGCAACCACCAAC 60.069 52.381 0.00 0.00 0.00 3.77
100 101 1.240256 GTACCATTCGCAACCACCAA 58.760 50.000 0.00 0.00 0.00 3.67
101 102 0.951525 CGTACCATTCGCAACCACCA 60.952 55.000 0.00 0.00 0.00 4.17
102 103 1.641123 CCGTACCATTCGCAACCACC 61.641 60.000 0.00 0.00 0.00 4.61
103 104 0.671163 TCCGTACCATTCGCAACCAC 60.671 55.000 0.00 0.00 0.00 4.16
104 105 0.390603 CTCCGTACCATTCGCAACCA 60.391 55.000 0.00 0.00 0.00 3.67
105 106 0.108520 TCTCCGTACCATTCGCAACC 60.109 55.000 0.00 0.00 0.00 3.77
106 107 0.997196 GTCTCCGTACCATTCGCAAC 59.003 55.000 0.00 0.00 0.00 4.17
107 108 0.457166 CGTCTCCGTACCATTCGCAA 60.457 55.000 0.00 0.00 0.00 4.85
108 109 1.138036 CGTCTCCGTACCATTCGCA 59.862 57.895 0.00 0.00 0.00 5.10
109 110 0.591741 CTCGTCTCCGTACCATTCGC 60.592 60.000 0.00 0.00 35.01 4.70
110 111 0.029035 CCTCGTCTCCGTACCATTCG 59.971 60.000 0.00 0.00 35.01 3.34
111 112 0.248949 GCCTCGTCTCCGTACCATTC 60.249 60.000 0.00 0.00 35.01 2.67
112 113 1.814527 GCCTCGTCTCCGTACCATT 59.185 57.895 0.00 0.00 35.01 3.16
113 114 2.478890 CGCCTCGTCTCCGTACCAT 61.479 63.158 0.00 0.00 35.01 3.55
114 115 3.129502 CGCCTCGTCTCCGTACCA 61.130 66.667 0.00 0.00 35.01 3.25
115 116 4.549516 GCGCCTCGTCTCCGTACC 62.550 72.222 0.00 0.00 35.01 3.34
116 117 4.883300 CGCGCCTCGTCTCCGTAC 62.883 72.222 0.00 0.00 35.01 3.67
120 121 4.933064 CCATCGCGCCTCGTCTCC 62.933 72.222 0.00 0.00 39.67 3.71
121 122 4.194720 ACCATCGCGCCTCGTCTC 62.195 66.667 0.00 0.00 39.67 3.36
122 123 4.498520 CACCATCGCGCCTCGTCT 62.499 66.667 0.00 0.00 39.67 4.18
130 131 4.838152 CCTCCCACCACCATCGCG 62.838 72.222 0.00 0.00 0.00 5.87
131 132 2.311688 CTACCTCCCACCACCATCGC 62.312 65.000 0.00 0.00 0.00 4.58
132 133 1.823295 CTACCTCCCACCACCATCG 59.177 63.158 0.00 0.00 0.00 3.84
133 134 1.527370 GCTACCTCCCACCACCATC 59.473 63.158 0.00 0.00 0.00 3.51
134 135 2.001269 GGCTACCTCCCACCACCAT 61.001 63.158 0.00 0.00 0.00 3.55
135 136 2.609610 GGCTACCTCCCACCACCA 60.610 66.667 0.00 0.00 0.00 4.17
136 137 3.782443 CGGCTACCTCCCACCACC 61.782 72.222 0.00 0.00 0.00 4.61
137 138 3.782443 CCGGCTACCTCCCACCAC 61.782 72.222 0.00 0.00 0.00 4.16
142 143 3.701760 TTACCCCCGGCTACCTCCC 62.702 68.421 0.00 0.00 0.00 4.30
143 144 2.041612 TTACCCCCGGCTACCTCC 60.042 66.667 0.00 0.00 0.00 4.30
144 145 2.138831 CCTTACCCCCGGCTACCTC 61.139 68.421 0.00 0.00 0.00 3.85
145 146 2.041197 CCTTACCCCCGGCTACCT 60.041 66.667 0.00 0.00 0.00 3.08
146 147 3.870190 GCCTTACCCCCGGCTACC 61.870 72.222 0.00 0.00 42.98 3.18
147 148 4.231439 CGCCTTACCCCCGGCTAC 62.231 72.222 0.00 0.00 44.11 3.58
155 156 4.710167 ACCAACGCCGCCTTACCC 62.710 66.667 0.00 0.00 0.00 3.69
156 157 2.670592 AACCAACGCCGCCTTACC 60.671 61.111 0.00 0.00 0.00 2.85
157 158 1.788067 AACAACCAACGCCGCCTTAC 61.788 55.000 0.00 0.00 0.00 2.34
158 159 1.526455 AACAACCAACGCCGCCTTA 60.526 52.632 0.00 0.00 0.00 2.69
159 160 2.831284 AACAACCAACGCCGCCTT 60.831 55.556 0.00 0.00 0.00 4.35
160 161 3.591835 CAACAACCAACGCCGCCT 61.592 61.111 0.00 0.00 0.00 5.52
177 178 2.519302 AACACACTGGCAGGTGGC 60.519 61.111 27.98 0.00 41.09 5.01
178 179 2.848858 GCAACACACTGGCAGGTGG 61.849 63.158 27.98 17.29 41.09 4.61
179 180 2.723746 GCAACACACTGGCAGGTG 59.276 61.111 25.04 25.04 42.34 4.00
180 181 2.901840 CGCAACACACTGGCAGGT 60.902 61.111 20.34 11.02 0.00 4.00
181 182 2.901840 ACGCAACACACTGGCAGG 60.902 61.111 20.34 10.34 0.00 4.85
182 183 1.992233 AACACGCAACACACTGGCAG 61.992 55.000 14.16 14.16 0.00 4.85
183 184 0.744771 TAACACGCAACACACTGGCA 60.745 50.000 0.00 0.00 0.00 4.92
184 185 0.316689 GTAACACGCAACACACTGGC 60.317 55.000 0.00 0.00 0.00 4.85
185 186 1.260561 GAGTAACACGCAACACACTGG 59.739 52.381 0.00 0.00 0.00 4.00
186 187 1.260561 GGAGTAACACGCAACACACTG 59.739 52.381 0.00 0.00 0.00 3.66
187 188 1.138266 AGGAGTAACACGCAACACACT 59.862 47.619 0.00 0.00 0.00 3.55
188 189 1.260561 CAGGAGTAACACGCAACACAC 59.739 52.381 0.00 0.00 0.00 3.82
189 190 1.577468 CAGGAGTAACACGCAACACA 58.423 50.000 0.00 0.00 0.00 3.72
190 191 0.234884 GCAGGAGTAACACGCAACAC 59.765 55.000 0.00 0.00 0.00 3.32
191 192 0.179070 TGCAGGAGTAACACGCAACA 60.179 50.000 0.00 0.00 0.00 3.33
192 193 1.128692 GATGCAGGAGTAACACGCAAC 59.871 52.381 0.00 0.00 35.98 4.17
193 194 1.438651 GATGCAGGAGTAACACGCAA 58.561 50.000 0.00 0.00 35.98 4.85
194 195 0.391130 GGATGCAGGAGTAACACGCA 60.391 55.000 0.00 0.00 36.95 5.24
195 196 0.108138 AGGATGCAGGAGTAACACGC 60.108 55.000 0.00 0.00 0.00 5.34
196 197 2.688446 TCTAGGATGCAGGAGTAACACG 59.312 50.000 0.00 0.00 0.00 4.49
197 198 3.954904 TCTCTAGGATGCAGGAGTAACAC 59.045 47.826 0.00 0.00 0.00 3.32
198 199 4.079730 TCTCTCTAGGATGCAGGAGTAACA 60.080 45.833 0.00 0.00 0.00 2.41
199 200 4.465886 TCTCTCTAGGATGCAGGAGTAAC 58.534 47.826 0.00 0.00 0.00 2.50
200 201 4.413851 TCTCTCTCTAGGATGCAGGAGTAA 59.586 45.833 0.00 0.00 0.00 2.24
201 202 3.977326 TCTCTCTCTAGGATGCAGGAGTA 59.023 47.826 0.00 0.00 0.00 2.59
202 203 2.782925 TCTCTCTCTAGGATGCAGGAGT 59.217 50.000 0.00 0.00 0.00 3.85
203 204 3.072915 TCTCTCTCTCTAGGATGCAGGAG 59.927 52.174 0.00 1.20 0.00 3.69
204 205 3.052329 TCTCTCTCTCTAGGATGCAGGA 58.948 50.000 0.00 0.00 0.00 3.86
205 206 3.072915 TCTCTCTCTCTCTAGGATGCAGG 59.927 52.174 0.00 0.00 0.00 4.85
206 207 4.040829 TCTCTCTCTCTCTCTAGGATGCAG 59.959 50.000 0.00 0.00 0.00 4.41
207 208 3.973305 TCTCTCTCTCTCTCTAGGATGCA 59.027 47.826 0.00 0.00 0.00 3.96
208 209 4.284490 TCTCTCTCTCTCTCTCTAGGATGC 59.716 50.000 0.00 0.00 0.00 3.91
209 210 5.777223 TCTCTCTCTCTCTCTCTCTAGGATG 59.223 48.000 0.00 0.00 0.00 3.51
210 211 5.970289 TCTCTCTCTCTCTCTCTCTAGGAT 58.030 45.833 0.00 0.00 0.00 3.24
211 212 5.134509 TCTCTCTCTCTCTCTCTCTCTAGGA 59.865 48.000 0.00 0.00 0.00 2.94
212 213 5.242838 GTCTCTCTCTCTCTCTCTCTCTAGG 59.757 52.000 0.00 0.00 0.00 3.02
213 214 6.068010 AGTCTCTCTCTCTCTCTCTCTCTAG 58.932 48.000 0.00 0.00 0.00 2.43
214 215 6.019656 AGTCTCTCTCTCTCTCTCTCTCTA 57.980 45.833 0.00 0.00 0.00 2.43
215 216 4.877773 AGTCTCTCTCTCTCTCTCTCTCT 58.122 47.826 0.00 0.00 0.00 3.10
216 217 5.355596 CAAGTCTCTCTCTCTCTCTCTCTC 58.644 50.000 0.00 0.00 0.00 3.20
217 218 4.163078 CCAAGTCTCTCTCTCTCTCTCTCT 59.837 50.000 0.00 0.00 0.00 3.10
218 219 4.162320 TCCAAGTCTCTCTCTCTCTCTCTC 59.838 50.000 0.00 0.00 0.00 3.20
219 220 4.080863 GTCCAAGTCTCTCTCTCTCTCTCT 60.081 50.000 0.00 0.00 0.00 3.10
220 221 4.192317 GTCCAAGTCTCTCTCTCTCTCTC 58.808 52.174 0.00 0.00 0.00 3.20
221 222 3.054361 GGTCCAAGTCTCTCTCTCTCTCT 60.054 52.174 0.00 0.00 0.00 3.10
222 223 3.279434 GGTCCAAGTCTCTCTCTCTCTC 58.721 54.545 0.00 0.00 0.00 3.20
223 224 2.647299 TGGTCCAAGTCTCTCTCTCTCT 59.353 50.000 0.00 0.00 0.00 3.10
224 225 3.016736 CTGGTCCAAGTCTCTCTCTCTC 58.983 54.545 0.00 0.00 0.00 3.20
225 226 2.378547 ACTGGTCCAAGTCTCTCTCTCT 59.621 50.000 0.00 0.00 0.00 3.10
226 227 2.491693 CACTGGTCCAAGTCTCTCTCTC 59.508 54.545 0.00 0.00 0.00 3.20
227 228 2.524306 CACTGGTCCAAGTCTCTCTCT 58.476 52.381 0.00 0.00 0.00 3.10
228 229 1.548269 CCACTGGTCCAAGTCTCTCTC 59.452 57.143 0.00 0.00 0.00 3.20
229 230 1.638529 CCACTGGTCCAAGTCTCTCT 58.361 55.000 0.00 0.00 0.00 3.10
230 231 0.036858 GCCACTGGTCCAAGTCTCTC 60.037 60.000 0.00 0.00 0.00 3.20
231 232 1.821061 CGCCACTGGTCCAAGTCTCT 61.821 60.000 0.00 0.00 0.00 3.10
232 233 1.374758 CGCCACTGGTCCAAGTCTC 60.375 63.158 0.00 0.00 0.00 3.36
233 234 0.830444 TACGCCACTGGTCCAAGTCT 60.830 55.000 0.00 0.00 0.00 3.24
234 235 0.389948 CTACGCCACTGGTCCAAGTC 60.390 60.000 0.00 0.00 0.00 3.01
235 236 1.671742 CTACGCCACTGGTCCAAGT 59.328 57.895 0.00 0.00 0.00 3.16
236 237 1.741770 GCTACGCCACTGGTCCAAG 60.742 63.158 0.00 0.00 0.00 3.61
237 238 0.901114 TAGCTACGCCACTGGTCCAA 60.901 55.000 0.00 0.00 0.00 3.53
238 239 1.304630 TAGCTACGCCACTGGTCCA 60.305 57.895 0.00 0.00 0.00 4.02
239 240 1.437986 CTAGCTACGCCACTGGTCC 59.562 63.158 0.00 0.00 0.00 4.46
240 241 1.437986 CCTAGCTACGCCACTGGTC 59.562 63.158 0.00 0.00 0.00 4.02
241 242 2.058595 CCCTAGCTACGCCACTGGT 61.059 63.158 0.00 0.00 0.00 4.00
276 277 0.183731 GGATTCCAGGGTGGTCCATC 59.816 60.000 0.00 0.00 39.03 3.51
382 383 1.980772 GCCAGCCTGATTTGCCAGT 60.981 57.895 0.00 0.00 32.43 4.00
408 409 3.589988 CCACATGAGTAGTCCAAGTCAC 58.410 50.000 0.00 0.00 31.78 3.67
411 412 1.977854 TGCCACATGAGTAGTCCAAGT 59.022 47.619 0.00 0.00 0.00 3.16
413 414 1.278985 CCTGCCACATGAGTAGTCCAA 59.721 52.381 0.00 0.00 0.00 3.53
415 416 0.905357 ACCTGCCACATGAGTAGTCC 59.095 55.000 0.00 0.00 0.00 3.85
416 417 1.550524 TCACCTGCCACATGAGTAGTC 59.449 52.381 0.00 0.00 0.00 2.59
417 418 1.552337 CTCACCTGCCACATGAGTAGT 59.448 52.381 0.00 0.00 36.02 2.73
419 420 1.937191 TCTCACCTGCCACATGAGTA 58.063 50.000 0.00 0.00 40.64 2.59
421 422 2.286872 GAATCTCACCTGCCACATGAG 58.713 52.381 0.00 0.00 41.06 2.90
422 423 1.629861 TGAATCTCACCTGCCACATGA 59.370 47.619 0.00 0.00 0.00 3.07
423 424 2.118313 TGAATCTCACCTGCCACATG 57.882 50.000 0.00 0.00 0.00 3.21
424 425 2.885135 TTGAATCTCACCTGCCACAT 57.115 45.000 0.00 0.00 0.00 3.21
428 429 4.762251 ACTAGTTTTTGAATCTCACCTGCC 59.238 41.667 0.00 0.00 0.00 4.85
429 430 5.470098 TGACTAGTTTTTGAATCTCACCTGC 59.530 40.000 0.00 0.00 0.00 4.85
430 431 6.483307 TGTGACTAGTTTTTGAATCTCACCTG 59.517 38.462 0.00 0.00 0.00 4.00
431 432 6.483640 GTGTGACTAGTTTTTGAATCTCACCT 59.516 38.462 0.00 0.00 0.00 4.00
432 433 6.260050 TGTGTGACTAGTTTTTGAATCTCACC 59.740 38.462 0.00 0.00 32.38 4.02
433 434 7.246674 TGTGTGACTAGTTTTTGAATCTCAC 57.753 36.000 0.00 0.00 33.41 3.51
434 435 7.933577 AGATGTGTGACTAGTTTTTGAATCTCA 59.066 33.333 0.00 0.00 0.00 3.27
435 436 8.316640 AGATGTGTGACTAGTTTTTGAATCTC 57.683 34.615 0.00 0.00 0.00 2.75
436 437 8.682936 AAGATGTGTGACTAGTTTTTGAATCT 57.317 30.769 0.00 0.00 0.00 2.40
437 438 9.736023 AAAAGATGTGTGACTAGTTTTTGAATC 57.264 29.630 0.00 0.00 0.00 2.52
465 466 4.082463 GTGATATTGAGGTTCCCGCAAAAA 60.082 41.667 3.57 0.00 45.47 1.94
466 467 3.442273 GTGATATTGAGGTTCCCGCAAAA 59.558 43.478 3.57 0.00 45.47 2.44
467 468 3.013921 GTGATATTGAGGTTCCCGCAAA 58.986 45.455 3.57 0.00 45.47 3.68
468 469 2.238646 AGTGATATTGAGGTTCCCGCAA 59.761 45.455 1.92 1.92 46.28 4.85
469 470 1.837439 AGTGATATTGAGGTTCCCGCA 59.163 47.619 0.00 0.00 0.00 5.69
470 471 2.622064 AGTGATATTGAGGTTCCCGC 57.378 50.000 0.00 0.00 0.00 6.13
471 472 3.065371 GCAAAGTGATATTGAGGTTCCCG 59.935 47.826 0.00 0.00 0.00 5.14
472 473 3.381590 GGCAAAGTGATATTGAGGTTCCC 59.618 47.826 0.00 0.00 0.00 3.97
473 474 3.381590 GGGCAAAGTGATATTGAGGTTCC 59.618 47.826 0.00 0.00 0.00 3.62
474 475 3.381590 GGGGCAAAGTGATATTGAGGTTC 59.618 47.826 0.00 0.00 0.00 3.62
475 476 3.365472 GGGGCAAAGTGATATTGAGGTT 58.635 45.455 0.00 0.00 0.00 3.50
476 477 2.683742 CGGGGCAAAGTGATATTGAGGT 60.684 50.000 0.00 0.00 0.00 3.85
477 478 1.949525 CGGGGCAAAGTGATATTGAGG 59.050 52.381 0.00 0.00 0.00 3.86
478 479 1.949525 CCGGGGCAAAGTGATATTGAG 59.050 52.381 0.00 0.00 0.00 3.02
479 480 1.283613 ACCGGGGCAAAGTGATATTGA 59.716 47.619 6.32 0.00 0.00 2.57
480 481 1.762708 ACCGGGGCAAAGTGATATTG 58.237 50.000 6.32 0.00 0.00 1.90
481 482 2.525105 AACCGGGGCAAAGTGATATT 57.475 45.000 6.32 0.00 0.00 1.28
482 483 2.495669 CAAAACCGGGGCAAAGTGATAT 59.504 45.455 6.32 0.00 0.00 1.63
483 484 1.889829 CAAAACCGGGGCAAAGTGATA 59.110 47.619 6.32 0.00 0.00 2.15
484 485 0.678950 CAAAACCGGGGCAAAGTGAT 59.321 50.000 6.32 0.00 0.00 3.06
485 486 1.395826 CCAAAACCGGGGCAAAGTGA 61.396 55.000 6.32 0.00 0.00 3.41
486 487 1.068921 CCAAAACCGGGGCAAAGTG 59.931 57.895 6.32 0.00 0.00 3.16
487 488 0.688087 TTCCAAAACCGGGGCAAAGT 60.688 50.000 6.32 0.00 0.00 2.66
488 489 0.033366 CTTCCAAAACCGGGGCAAAG 59.967 55.000 6.32 0.00 0.00 2.77
489 490 0.397254 TCTTCCAAAACCGGGGCAAA 60.397 50.000 6.32 0.00 0.00 3.68
490 491 0.397254 TTCTTCCAAAACCGGGGCAA 60.397 50.000 6.32 0.00 0.00 4.52
491 492 0.397254 TTTCTTCCAAAACCGGGGCA 60.397 50.000 6.32 0.00 0.00 5.36
492 493 0.317160 CTTTCTTCCAAAACCGGGGC 59.683 55.000 6.32 0.00 0.00 5.80
493 494 1.699730 ACTTTCTTCCAAAACCGGGG 58.300 50.000 6.32 0.00 0.00 5.73
494 495 3.887110 AGTAACTTTCTTCCAAAACCGGG 59.113 43.478 6.32 0.00 0.00 5.73
495 496 4.319261 CGAGTAACTTTCTTCCAAAACCGG 60.319 45.833 0.00 0.00 0.00 5.28
496 497 4.319261 CCGAGTAACTTTCTTCCAAAACCG 60.319 45.833 0.00 0.00 0.00 4.44
497 498 4.577693 ACCGAGTAACTTTCTTCCAAAACC 59.422 41.667 0.00 0.00 0.00 3.27
498 499 5.746307 ACCGAGTAACTTTCTTCCAAAAC 57.254 39.130 0.00 0.00 0.00 2.43
499 500 7.716123 TCATAACCGAGTAACTTTCTTCCAAAA 59.284 33.333 0.00 0.00 0.00 2.44
500 501 7.218614 TCATAACCGAGTAACTTTCTTCCAAA 58.781 34.615 0.00 0.00 0.00 3.28
501 502 6.761312 TCATAACCGAGTAACTTTCTTCCAA 58.239 36.000 0.00 0.00 0.00 3.53
502 503 6.209986 TCTCATAACCGAGTAACTTTCTTCCA 59.790 38.462 0.00 0.00 34.46 3.53
503 504 6.530887 GTCTCATAACCGAGTAACTTTCTTCC 59.469 42.308 0.00 0.00 34.46 3.46
504 505 7.273815 CAGTCTCATAACCGAGTAACTTTCTTC 59.726 40.741 0.00 0.00 34.46 2.87
505 506 7.091443 CAGTCTCATAACCGAGTAACTTTCTT 58.909 38.462 0.00 0.00 34.46 2.52
506 507 6.350277 CCAGTCTCATAACCGAGTAACTTTCT 60.350 42.308 0.00 0.00 34.46 2.52
507 508 5.805994 CCAGTCTCATAACCGAGTAACTTTC 59.194 44.000 0.00 0.00 34.46 2.62
508 509 5.479375 TCCAGTCTCATAACCGAGTAACTTT 59.521 40.000 0.00 0.00 34.46 2.66
509 510 5.014858 TCCAGTCTCATAACCGAGTAACTT 58.985 41.667 0.00 0.00 34.46 2.66
510 511 4.597004 TCCAGTCTCATAACCGAGTAACT 58.403 43.478 0.00 0.00 34.46 2.24
511 512 4.202030 CCTCCAGTCTCATAACCGAGTAAC 60.202 50.000 0.00 0.00 34.46 2.50
512 513 3.952323 CCTCCAGTCTCATAACCGAGTAA 59.048 47.826 0.00 0.00 34.46 2.24
513 514 3.552875 CCTCCAGTCTCATAACCGAGTA 58.447 50.000 0.00 0.00 34.46 2.59
514 515 2.379972 CCTCCAGTCTCATAACCGAGT 58.620 52.381 0.00 0.00 34.46 4.18
515 516 1.683917 CCCTCCAGTCTCATAACCGAG 59.316 57.143 0.00 0.00 0.00 4.63
516 517 1.688311 CCCCTCCAGTCTCATAACCGA 60.688 57.143 0.00 0.00 0.00 4.69
517 518 0.753262 CCCCTCCAGTCTCATAACCG 59.247 60.000 0.00 0.00 0.00 4.44
518 519 1.763545 GACCCCTCCAGTCTCATAACC 59.236 57.143 0.00 0.00 0.00 2.85
519 520 2.467880 TGACCCCTCCAGTCTCATAAC 58.532 52.381 0.00 0.00 35.21 1.89
520 521 2.940514 TGACCCCTCCAGTCTCATAA 57.059 50.000 0.00 0.00 35.21 1.90
521 522 2.940514 TTGACCCCTCCAGTCTCATA 57.059 50.000 0.00 0.00 35.21 2.15
522 523 2.044793 TTTGACCCCTCCAGTCTCAT 57.955 50.000 0.00 0.00 35.21 2.90
523 524 1.630369 CATTTGACCCCTCCAGTCTCA 59.370 52.381 0.00 0.00 35.21 3.27
524 525 1.630878 ACATTTGACCCCTCCAGTCTC 59.369 52.381 0.00 0.00 35.21 3.36
525 526 1.630878 GACATTTGACCCCTCCAGTCT 59.369 52.381 0.00 0.00 35.21 3.24
526 527 1.676014 CGACATTTGACCCCTCCAGTC 60.676 57.143 0.00 0.00 34.72 3.51
527 528 0.324943 CGACATTTGACCCCTCCAGT 59.675 55.000 0.00 0.00 0.00 4.00
528 529 1.026718 GCGACATTTGACCCCTCCAG 61.027 60.000 0.00 0.00 0.00 3.86
529 530 1.002624 GCGACATTTGACCCCTCCA 60.003 57.895 0.00 0.00 0.00 3.86
530 531 0.744771 GAGCGACATTTGACCCCTCC 60.745 60.000 0.00 0.00 0.00 4.30
531 532 1.084370 CGAGCGACATTTGACCCCTC 61.084 60.000 0.00 0.00 0.00 4.30
532 533 1.079127 CGAGCGACATTTGACCCCT 60.079 57.895 0.00 0.00 0.00 4.79
533 534 0.672401 TTCGAGCGACATTTGACCCC 60.672 55.000 0.00 0.00 0.00 4.95
534 535 1.153353 TTTCGAGCGACATTTGACCC 58.847 50.000 0.00 0.00 0.00 4.46
535 536 2.961522 TTTTCGAGCGACATTTGACC 57.038 45.000 0.00 0.00 0.00 4.02
536 537 4.712763 AGAATTTTCGAGCGACATTTGAC 58.287 39.130 0.00 0.00 0.00 3.18
537 538 5.049749 TCAAGAATTTTCGAGCGACATTTGA 60.050 36.000 0.00 0.00 0.00 2.69
538 539 5.146460 TCAAGAATTTTCGAGCGACATTTG 58.854 37.500 0.00 0.00 0.00 2.32
539 540 5.356882 TCAAGAATTTTCGAGCGACATTT 57.643 34.783 0.00 0.00 0.00 2.32
540 541 4.142816 CCTCAAGAATTTTCGAGCGACATT 60.143 41.667 0.00 0.00 0.00 2.71
541 542 3.372206 CCTCAAGAATTTTCGAGCGACAT 59.628 43.478 0.00 0.00 0.00 3.06
542 543 2.736721 CCTCAAGAATTTTCGAGCGACA 59.263 45.455 0.00 0.00 0.00 4.35
543 544 2.474691 GCCTCAAGAATTTTCGAGCGAC 60.475 50.000 0.00 0.00 0.00 5.19
544 545 1.732259 GCCTCAAGAATTTTCGAGCGA 59.268 47.619 0.00 0.00 0.00 4.93
545 546 1.464608 TGCCTCAAGAATTTTCGAGCG 59.535 47.619 0.00 0.00 0.00 5.03
546 547 2.414691 GGTGCCTCAAGAATTTTCGAGC 60.415 50.000 0.00 0.00 0.00 5.03
547 548 2.813754 TGGTGCCTCAAGAATTTTCGAG 59.186 45.455 0.00 0.00 0.00 4.04
548 549 2.813754 CTGGTGCCTCAAGAATTTTCGA 59.186 45.455 0.00 0.00 0.00 3.71
549 550 2.813754 TCTGGTGCCTCAAGAATTTTCG 59.186 45.455 0.00 0.00 0.00 3.46
550 551 4.219288 ACATCTGGTGCCTCAAGAATTTTC 59.781 41.667 0.00 0.00 0.00 2.29
551 552 4.154942 ACATCTGGTGCCTCAAGAATTTT 58.845 39.130 0.00 0.00 0.00 1.82
552 553 3.771216 ACATCTGGTGCCTCAAGAATTT 58.229 40.909 0.00 0.00 0.00 1.82
553 554 3.446442 ACATCTGGTGCCTCAAGAATT 57.554 42.857 0.00 0.00 0.00 2.17
554 555 3.776969 TCTACATCTGGTGCCTCAAGAAT 59.223 43.478 0.00 0.00 0.00 2.40
555 556 3.055819 GTCTACATCTGGTGCCTCAAGAA 60.056 47.826 0.00 0.00 0.00 2.52
556 557 2.497675 GTCTACATCTGGTGCCTCAAGA 59.502 50.000 0.00 0.00 0.00 3.02
557 558 2.499289 AGTCTACATCTGGTGCCTCAAG 59.501 50.000 0.00 0.00 0.00 3.02
558 559 2.540383 AGTCTACATCTGGTGCCTCAA 58.460 47.619 0.00 0.00 0.00 3.02
559 560 2.238084 AGTCTACATCTGGTGCCTCA 57.762 50.000 0.00 0.00 0.00 3.86
560 561 3.618690 AAAGTCTACATCTGGTGCCTC 57.381 47.619 0.00 0.00 0.00 4.70
561 562 3.560025 CCAAAAGTCTACATCTGGTGCCT 60.560 47.826 0.00 0.00 0.00 4.75
562 563 2.749621 CCAAAAGTCTACATCTGGTGCC 59.250 50.000 0.00 0.00 0.00 5.01
563 564 3.674997 TCCAAAAGTCTACATCTGGTGC 58.325 45.455 0.00 0.00 0.00 5.01
564 565 5.152623 TCTCCAAAAGTCTACATCTGGTG 57.847 43.478 0.00 0.00 0.00 4.17
565 566 5.308237 AGTTCTCCAAAAGTCTACATCTGGT 59.692 40.000 0.00 0.00 0.00 4.00
566 567 5.799213 AGTTCTCCAAAAGTCTACATCTGG 58.201 41.667 0.00 0.00 0.00 3.86
567 568 6.931281 TCAAGTTCTCCAAAAGTCTACATCTG 59.069 38.462 0.00 0.00 0.00 2.90
568 569 7.015682 TCTCAAGTTCTCCAAAAGTCTACATCT 59.984 37.037 0.00 0.00 0.00 2.90
569 570 7.155328 TCTCAAGTTCTCCAAAAGTCTACATC 58.845 38.462 0.00 0.00 0.00 3.06
570 571 7.015682 TCTCTCAAGTTCTCCAAAAGTCTACAT 59.984 37.037 0.00 0.00 0.00 2.29
571 572 6.323996 TCTCTCAAGTTCTCCAAAAGTCTACA 59.676 38.462 0.00 0.00 0.00 2.74
572 573 6.643360 GTCTCTCAAGTTCTCCAAAAGTCTAC 59.357 42.308 0.00 0.00 0.00 2.59
573 574 6.239345 GGTCTCTCAAGTTCTCCAAAAGTCTA 60.239 42.308 0.00 0.00 0.00 2.59
574 575 5.454045 GGTCTCTCAAGTTCTCCAAAAGTCT 60.454 44.000 0.00 0.00 0.00 3.24
575 576 4.752604 GGTCTCTCAAGTTCTCCAAAAGTC 59.247 45.833 0.00 0.00 0.00 3.01
576 577 4.164221 TGGTCTCTCAAGTTCTCCAAAAGT 59.836 41.667 0.00 0.00 0.00 2.66
577 578 4.708177 TGGTCTCTCAAGTTCTCCAAAAG 58.292 43.478 0.00 0.00 0.00 2.27
578 579 4.771114 TGGTCTCTCAAGTTCTCCAAAA 57.229 40.909 0.00 0.00 0.00 2.44
579 580 4.771114 TTGGTCTCTCAAGTTCTCCAAA 57.229 40.909 0.00 0.00 31.82 3.28
580 581 4.771114 TTTGGTCTCTCAAGTTCTCCAA 57.229 40.909 0.00 0.00 0.00 3.53
581 582 4.771114 TTTTGGTCTCTCAAGTTCTCCA 57.229 40.909 0.00 0.00 0.00 3.86
582 583 7.929941 ATATTTTTGGTCTCTCAAGTTCTCC 57.070 36.000 0.00 0.00 0.00 3.71
607 608 9.612066 TGCATCACTTTTAAAAAGGAGAAAAAT 57.388 25.926 1.66 0.00 0.00 1.82
608 609 9.612066 ATGCATCACTTTTAAAAAGGAGAAAAA 57.388 25.926 1.66 0.00 0.00 1.94
609 610 9.612066 AATGCATCACTTTTAAAAAGGAGAAAA 57.388 25.926 0.00 0.00 0.00 2.29
610 611 9.612066 AAATGCATCACTTTTAAAAAGGAGAAA 57.388 25.926 0.00 0.00 0.00 2.52
611 612 9.612066 AAAATGCATCACTTTTAAAAAGGAGAA 57.388 25.926 0.00 0.00 0.00 2.87
612 613 9.612066 AAAAATGCATCACTTTTAAAAAGGAGA 57.388 25.926 0.00 4.41 0.00 3.71
639 640 9.788960 GTTTATTTTAAAACAAAATGCACCCAA 57.211 25.926 5.98 0.00 38.85 4.12
640 641 8.956426 TGTTTATTTTAAAACAAAATGCACCCA 58.044 25.926 5.98 0.00 44.23 4.51
696 697 8.932610 ACAGTAGATTTCTGACCATCATCTTAT 58.067 33.333 0.00 0.00 36.81 1.73
697 698 8.311395 ACAGTAGATTTCTGACCATCATCTTA 57.689 34.615 0.00 0.00 36.81 2.10
698 699 7.192852 ACAGTAGATTTCTGACCATCATCTT 57.807 36.000 0.00 0.00 36.81 2.40
699 700 6.805016 ACAGTAGATTTCTGACCATCATCT 57.195 37.500 0.00 0.00 36.81 2.90
731 732 9.269453 CCTTTTGTTTTGTACTAGTAGCTAACT 57.731 33.333 1.87 0.00 42.62 2.24
732 733 8.501580 CCCTTTTGTTTTGTACTAGTAGCTAAC 58.498 37.037 1.87 8.15 0.00 2.34
752 753 2.961062 GGATATGCATGCAGACCCTTTT 59.039 45.455 26.69 9.00 0.00 2.27
776 777 6.485648 GTGTGTGGTGAAGAGTAAAAATAGGT 59.514 38.462 0.00 0.00 0.00 3.08
1175 1266 3.781162 GTTAACACGACGGGCGGC 61.781 66.667 8.66 0.00 46.49 6.53
1187 1278 2.937799 TGAACGAGTTGGTGGTGTTAAC 59.062 45.455 0.00 0.00 0.00 2.01
1190 1281 2.218603 GATGAACGAGTTGGTGGTGTT 58.781 47.619 0.00 0.00 0.00 3.32
1191 1282 1.872237 CGATGAACGAGTTGGTGGTGT 60.872 52.381 0.00 0.00 45.77 4.16
1197 1288 1.683790 GACGCCGATGAACGAGTTGG 61.684 60.000 0.00 0.00 45.77 3.77
1201 1292 2.099638 TCGACGCCGATGAACGAG 59.900 61.111 0.00 0.00 45.77 4.18
1211 1302 2.746277 AACCAAGCCATCGACGCC 60.746 61.111 2.80 0.00 0.00 5.68
1212 1303 1.369091 ATCAACCAAGCCATCGACGC 61.369 55.000 0.00 0.00 0.00 5.19
1213 1304 0.374758 CATCAACCAAGCCATCGACG 59.625 55.000 0.00 0.00 0.00 5.12
1214 1305 1.737838 TCATCAACCAAGCCATCGAC 58.262 50.000 0.00 0.00 0.00 4.20
1219 1310 5.999205 ACAATTTATCATCAACCAAGCCA 57.001 34.783 0.00 0.00 0.00 4.75
1320 2109 2.158813 ACTCACACTTGTTGTACCCCTG 60.159 50.000 0.00 0.00 35.67 4.45
1337 2249 2.994995 ATGGGGTGCGACGACTCA 60.995 61.111 0.00 0.00 0.00 3.41
1594 3790 9.976511 CAAAAGCATTATATGGATGTTCATCTT 57.023 29.630 11.73 4.14 0.00 2.40
1615 3813 6.029346 ACCATTAATGTGAAGCTCCAAAAG 57.971 37.500 14.25 0.00 0.00 2.27
1629 3827 7.169158 TGGAAAGGAGCTAAAACCATTAATG 57.831 36.000 8.58 8.58 0.00 1.90
1815 4017 7.997773 ACACATGTTACTTGTCTAGTCTCTA 57.002 36.000 0.00 0.00 38.33 2.43
1816 4018 6.902771 ACACATGTTACTTGTCTAGTCTCT 57.097 37.500 0.00 0.00 38.33 3.10
1817 4019 7.569591 GCAAACACATGTTACTTGTCTAGTCTC 60.570 40.741 0.00 0.00 37.25 3.36
1820 4022 5.820423 TGCAAACACATGTTACTTGTCTAGT 59.180 36.000 0.00 0.00 37.25 2.57
1843 4045 9.636879 TCACCATGTGTTTATAAATCATTTGTG 57.363 29.630 21.25 21.25 34.79 3.33
1858 4060 3.960102 AGAACCATTTGTCACCATGTGTT 59.040 39.130 0.00 0.00 34.79 3.32
1892 4197 4.335315 GCAACCGATTGAACTGATGGATTA 59.665 41.667 0.00 0.00 38.15 1.75
1896 4201 1.133025 GGCAACCGATTGAACTGATGG 59.867 52.381 0.00 0.00 38.15 3.51
1897 4202 2.086869 AGGCAACCGATTGAACTGATG 58.913 47.619 0.00 0.00 38.15 3.07
1900 4205 2.699954 AGTAGGCAACCGATTGAACTG 58.300 47.619 0.00 0.00 38.15 3.16
1904 4209 1.003118 AGCAAGTAGGCAACCGATTGA 59.997 47.619 0.00 0.00 38.15 2.57
1905 4210 1.398390 GAGCAAGTAGGCAACCGATTG 59.602 52.381 0.00 0.00 38.99 2.67
1906 4211 1.679032 GGAGCAAGTAGGCAACCGATT 60.679 52.381 0.00 0.00 35.83 3.34
1907 4212 0.107654 GGAGCAAGTAGGCAACCGAT 60.108 55.000 0.00 0.00 35.83 4.18
1909 4214 0.321653 AAGGAGCAAGTAGGCAACCG 60.322 55.000 0.00 0.00 37.50 4.44
1937 4276 3.157252 TCCAGCGGAGGAGATGCC 61.157 66.667 0.00 0.00 32.77 4.40
1942 4281 1.440938 CGAGTAGTCCAGCGGAGGAG 61.441 65.000 0.00 0.00 38.64 3.69
1955 4294 6.438259 TGAGGAACAATAGAAGACGAGTAG 57.562 41.667 0.00 0.00 0.00 2.57
1996 4380 1.953138 GCGAGATCCATGGCGACTG 60.953 63.158 6.96 0.00 0.00 3.51
2014 4499 1.376812 GGAGGGCCAAACTACACCG 60.377 63.158 6.18 0.00 0.00 4.94
2019 4504 1.203440 AGAAGGAGGAGGGCCAAACTA 60.203 52.381 6.18 0.00 36.29 2.24
2022 4507 0.698818 GAAGAAGGAGGAGGGCCAAA 59.301 55.000 6.18 0.00 36.29 3.28
2024 4509 1.616628 GGAAGAAGGAGGAGGGCCA 60.617 63.158 6.18 0.00 36.29 5.36
2027 4512 2.115427 GAAGAGGAAGAAGGAGGAGGG 58.885 57.143 0.00 0.00 0.00 4.30
2041 4526 2.171840 TGGAGAAGAAGGTCGAAGAGG 58.828 52.381 0.00 0.00 36.95 3.69
2042 4527 3.430098 CCATGGAGAAGAAGGTCGAAGAG 60.430 52.174 5.56 0.00 36.95 2.85
2086 4850 0.753262 GAGGCGAAGGATAGGAGCAA 59.247 55.000 0.00 0.00 0.00 3.91
2116 4880 3.054361 GGAACCTCCATTTTGAGCTCCTA 60.054 47.826 12.15 0.00 36.28 2.94
2117 4881 2.291217 GGAACCTCCATTTTGAGCTCCT 60.291 50.000 12.15 0.00 36.28 3.69
2138 4902 1.069924 CTCGAGCACAAGACTGCGAG 61.070 60.000 0.00 0.00 42.42 5.03
2140 4904 2.091112 CCTCGAGCACAAGACTGCG 61.091 63.158 6.99 0.00 42.42 5.18
2143 4907 1.621992 TCTTCCTCGAGCACAAGACT 58.378 50.000 6.99 0.00 0.00 3.24
2146 4910 1.066573 ACCATCTTCCTCGAGCACAAG 60.067 52.381 6.99 8.64 0.00 3.16
2149 4913 0.460987 CCACCATCTTCCTCGAGCAC 60.461 60.000 6.99 0.00 0.00 4.40
2173 4945 0.986019 ACCGGATGACAATGGGCCTA 60.986 55.000 9.46 0.00 0.00 3.93
2208 4980 3.591977 ACACCTCCCTAAACTAAATGCCT 59.408 43.478 0.00 0.00 0.00 4.75
2211 4983 4.918588 ACCACACCTCCCTAAACTAAATG 58.081 43.478 0.00 0.00 0.00 2.32
2212 4984 6.677076 AGATACCACACCTCCCTAAACTAAAT 59.323 38.462 0.00 0.00 0.00 1.40
2257 5029 4.079253 TGGCATTTTCACTTCTAAGGGTC 58.921 43.478 0.00 0.00 0.00 4.46
2258 5030 3.826729 GTGGCATTTTCACTTCTAAGGGT 59.173 43.478 0.00 0.00 32.78 4.34
2268 5042 1.620822 AGAGGTGGTGGCATTTTCAC 58.379 50.000 0.00 0.00 34.61 3.18
2270 5044 2.519013 AGAAGAGGTGGTGGCATTTTC 58.481 47.619 0.00 0.00 0.00 2.29
2283 5057 3.056536 TCATGGAGAACGTGAAGAAGAGG 60.057 47.826 0.00 0.00 41.99 3.69
2290 5064 1.778334 CACGTCATGGAGAACGTGAA 58.222 50.000 25.29 0.00 46.16 3.18
2294 5068 0.163788 GTTGCACGTCATGGAGAACG 59.836 55.000 3.37 3.37 0.00 3.95
2310 5084 6.129009 GCTAATCACAATCTGTTGCAAAGTTG 60.129 38.462 0.00 6.75 38.96 3.16
2324 5098 7.923888 GTATGTCTCAACATGCTAATCACAAT 58.076 34.615 0.00 0.00 45.72 2.71
2326 5100 6.908870 GTATGTCTCAACATGCTAATCACA 57.091 37.500 0.00 0.00 45.72 3.58
2345 5119 1.075525 TCGGGGTGGAGGGAGTATG 60.076 63.158 0.00 0.00 0.00 2.39
2357 5131 0.182061 TATCTAGACACGCTCGGGGT 59.818 55.000 0.00 0.00 0.00 4.95
2358 5132 0.592148 GTATCTAGACACGCTCGGGG 59.408 60.000 0.00 0.00 0.00 5.73
2359 5133 1.306148 TGTATCTAGACACGCTCGGG 58.694 55.000 0.00 0.00 0.00 5.14
2360 5134 2.809119 AGATGTATCTAGACACGCTCGG 59.191 50.000 0.00 0.00 34.85 4.63
2383 5157 9.010029 TCCCAAATTACTTGTCTTAGATTTGTC 57.990 33.333 0.00 0.00 34.40 3.18
2384 5158 8.793592 GTCCCAAATTACTTGTCTTAGATTTGT 58.206 33.333 0.00 0.00 34.40 2.83
2386 5160 7.120726 CCGTCCCAAATTACTTGTCTTAGATTT 59.879 37.037 0.00 0.00 32.65 2.17
2387 5161 6.598064 CCGTCCCAAATTACTTGTCTTAGATT 59.402 38.462 0.00 0.00 32.65 2.40
2388 5162 6.070424 TCCGTCCCAAATTACTTGTCTTAGAT 60.070 38.462 0.00 0.00 32.65 1.98
2389 5163 5.246656 TCCGTCCCAAATTACTTGTCTTAGA 59.753 40.000 0.00 0.00 32.65 2.10
2390 5164 5.484715 TCCGTCCCAAATTACTTGTCTTAG 58.515 41.667 0.00 0.00 32.65 2.18
2392 5166 4.041198 TCTCCGTCCCAAATTACTTGTCTT 59.959 41.667 0.00 0.00 32.65 3.01
2393 5167 3.581332 TCTCCGTCCCAAATTACTTGTCT 59.419 43.478 0.00 0.00 32.65 3.41
2394 5168 3.934068 TCTCCGTCCCAAATTACTTGTC 58.066 45.455 0.00 0.00 32.65 3.18
2395 5169 4.569719 ATCTCCGTCCCAAATTACTTGT 57.430 40.909 0.00 0.00 32.65 3.16
2397 5171 8.030913 ACTATTATCTCCGTCCCAAATTACTT 57.969 34.615 0.00 0.00 0.00 2.24
2399 5173 8.583296 ACTACTATTATCTCCGTCCCAAATTAC 58.417 37.037 0.00 0.00 0.00 1.89
2400 5174 8.716674 ACTACTATTATCTCCGTCCCAAATTA 57.283 34.615 0.00 0.00 0.00 1.40
2401 5175 7.613551 ACTACTATTATCTCCGTCCCAAATT 57.386 36.000 0.00 0.00 0.00 1.82
2402 5176 7.613551 AACTACTATTATCTCCGTCCCAAAT 57.386 36.000 0.00 0.00 0.00 2.32
2405 5179 7.520798 TCTTAACTACTATTATCTCCGTCCCA 58.479 38.462 0.00 0.00 0.00 4.37
2406 5180 7.992754 TCTTAACTACTATTATCTCCGTCCC 57.007 40.000 0.00 0.00 0.00 4.46
2439 5213 5.691896 AGAGGGGTGCCATTTATAGTTTAC 58.308 41.667 0.00 0.00 0.00 2.01
2441 5215 4.478686 AGAGAGGGGTGCCATTTATAGTTT 59.521 41.667 0.00 0.00 0.00 2.66
2442 5216 4.047883 AGAGAGGGGTGCCATTTATAGTT 58.952 43.478 0.00 0.00 0.00 2.24
2443 5217 3.392616 CAGAGAGGGGTGCCATTTATAGT 59.607 47.826 0.00 0.00 0.00 2.12
2444 5218 3.244700 CCAGAGAGGGGTGCCATTTATAG 60.245 52.174 0.00 0.00 0.00 1.31
2446 5220 1.496429 CCAGAGAGGGGTGCCATTTAT 59.504 52.381 0.00 0.00 0.00 1.40
2458 5232 2.060050 ACTCGATGTACCCAGAGAGG 57.940 55.000 13.27 0.00 34.33 3.69
2463 5237 4.451629 AACTACAACTCGATGTACCCAG 57.548 45.455 0.00 0.00 34.75 4.45
2464 5238 5.255687 TCTAACTACAACTCGATGTACCCA 58.744 41.667 0.00 0.00 34.75 4.51
2465 5239 5.732810 GCTCTAACTACAACTCGATGTACCC 60.733 48.000 0.00 0.00 34.75 3.69
2467 5241 5.877031 TGCTCTAACTACAACTCGATGTAC 58.123 41.667 0.00 0.00 34.75 2.90
2470 5244 5.826586 AGATGCTCTAACTACAACTCGATG 58.173 41.667 0.00 0.00 0.00 3.84
2471 5245 5.825679 AGAGATGCTCTAACTACAACTCGAT 59.174 40.000 0.00 0.00 39.28 3.59
2474 5248 7.562454 AGTAGAGATGCTCTAACTACAACTC 57.438 40.000 5.79 0.00 43.53 3.01
2475 5249 8.487848 TCTAGTAGAGATGCTCTAACTACAACT 58.512 37.037 5.79 3.14 43.53 3.16
2476 5250 8.553696 GTCTAGTAGAGATGCTCTAACTACAAC 58.446 40.741 0.00 6.18 43.53 3.32
2479 5253 6.652062 GGGTCTAGTAGAGATGCTCTAACTAC 59.348 46.154 0.00 0.00 43.53 2.73
2482 5256 4.763279 GGGGTCTAGTAGAGATGCTCTAAC 59.237 50.000 0.00 1.62 43.53 2.34
2483 5257 4.665957 AGGGGTCTAGTAGAGATGCTCTAA 59.334 45.833 0.00 0.00 43.53 2.10
2484 5258 4.244475 AGGGGTCTAGTAGAGATGCTCTA 58.756 47.826 0.00 0.22 41.50 2.43
2486 5260 3.518992 AGGGGTCTAGTAGAGATGCTC 57.481 52.381 0.00 0.00 36.29 4.26
2488 5262 3.423749 GGTAGGGGTCTAGTAGAGATGC 58.576 54.545 0.00 0.00 36.29 3.91
2489 5263 3.658705 AGGGTAGGGGTCTAGTAGAGATG 59.341 52.174 0.00 0.00 36.29 2.90
2491 5265 3.451677 AGGGTAGGGGTCTAGTAGAGA 57.548 52.381 0.00 0.00 0.00 3.10
2494 5268 4.664536 ACTTCTAGGGTAGGGGTCTAGTAG 59.335 50.000 0.00 0.00 0.00 2.57
2495 5269 4.650466 ACTTCTAGGGTAGGGGTCTAGTA 58.350 47.826 0.00 0.00 0.00 1.82
2496 5270 3.462954 GACTTCTAGGGTAGGGGTCTAGT 59.537 52.174 0.00 0.00 0.00 2.57
2497 5271 3.181430 GGACTTCTAGGGTAGGGGTCTAG 60.181 56.522 0.00 0.00 32.54 2.43
2498 5272 2.788215 GGACTTCTAGGGTAGGGGTCTA 59.212 54.545 0.00 0.00 32.54 2.59
2500 5274 1.290130 TGGACTTCTAGGGTAGGGGTC 59.710 57.143 0.00 0.00 0.00 4.46
2501 5275 1.400941 TGGACTTCTAGGGTAGGGGT 58.599 55.000 0.00 0.00 0.00 4.95
2502 5276 2.563039 TTGGACTTCTAGGGTAGGGG 57.437 55.000 0.00 0.00 0.00 4.79
2503 5277 3.054582 GGTTTTGGACTTCTAGGGTAGGG 60.055 52.174 0.00 0.00 0.00 3.53
2504 5278 3.844804 AGGTTTTGGACTTCTAGGGTAGG 59.155 47.826 0.00 0.00 0.00 3.18
2507 5281 4.368565 GAAGGTTTTGGACTTCTAGGGT 57.631 45.455 0.00 0.00 39.88 4.34
2514 5288 3.074094 GGTAGGGAGAAGGTTTTGGACTT 59.926 47.826 0.00 0.00 0.00 3.01
2515 5289 2.643304 GGTAGGGAGAAGGTTTTGGACT 59.357 50.000 0.00 0.00 0.00 3.85
2516 5290 2.290768 GGGTAGGGAGAAGGTTTTGGAC 60.291 54.545 0.00 0.00 0.00 4.02
2517 5291 1.990327 GGGTAGGGAGAAGGTTTTGGA 59.010 52.381 0.00 0.00 0.00 3.53
2518 5292 1.993301 AGGGTAGGGAGAAGGTTTTGG 59.007 52.381 0.00 0.00 0.00 3.28
2519 5293 2.375509 ACAGGGTAGGGAGAAGGTTTTG 59.624 50.000 0.00 0.00 0.00 2.44
2520 5294 2.714808 ACAGGGTAGGGAGAAGGTTTT 58.285 47.619 0.00 0.00 0.00 2.43
2521 5295 2.435203 ACAGGGTAGGGAGAAGGTTT 57.565 50.000 0.00 0.00 0.00 3.27
2522 5296 2.435203 AACAGGGTAGGGAGAAGGTT 57.565 50.000 0.00 0.00 0.00 3.50
2523 5297 2.435203 AAACAGGGTAGGGAGAAGGT 57.565 50.000 0.00 0.00 0.00 3.50
2524 5298 2.026169 GGAAAACAGGGTAGGGAGAAGG 60.026 54.545 0.00 0.00 0.00 3.46
2525 5299 2.026169 GGGAAAACAGGGTAGGGAGAAG 60.026 54.545 0.00 0.00 0.00 2.85
2526 5300 1.990327 GGGAAAACAGGGTAGGGAGAA 59.010 52.381 0.00 0.00 0.00 2.87
2527 5301 1.665137 GGGAAAACAGGGTAGGGAGA 58.335 55.000 0.00 0.00 0.00 3.71
2528 5302 0.624254 GGGGAAAACAGGGTAGGGAG 59.376 60.000 0.00 0.00 0.00 4.30
2529 5303 0.103823 TGGGGAAAACAGGGTAGGGA 60.104 55.000 0.00 0.00 0.00 4.20
2530 5304 0.781278 TTGGGGAAAACAGGGTAGGG 59.219 55.000 0.00 0.00 0.00 3.53
2531 5305 2.687003 TTTGGGGAAAACAGGGTAGG 57.313 50.000 0.00 0.00 0.00 3.18
2532 5306 3.901222 ACAATTTGGGGAAAACAGGGTAG 59.099 43.478 0.78 0.00 0.00 3.18
2533 5307 3.930035 ACAATTTGGGGAAAACAGGGTA 58.070 40.909 0.78 0.00 0.00 3.69
2534 5308 2.770447 ACAATTTGGGGAAAACAGGGT 58.230 42.857 0.78 0.00 0.00 4.34
2535 5309 3.855255 AACAATTTGGGGAAAACAGGG 57.145 42.857 0.78 0.00 0.00 4.45
2536 5310 5.762711 CCTAAAACAATTTGGGGAAAACAGG 59.237 40.000 0.78 0.00 41.97 4.00
2537 5311 5.238432 GCCTAAAACAATTTGGGGAAAACAG 59.762 40.000 0.78 0.00 44.87 3.16
2538 5312 5.126779 GCCTAAAACAATTTGGGGAAAACA 58.873 37.500 0.78 0.00 44.87 2.83
2539 5313 5.126779 TGCCTAAAACAATTTGGGGAAAAC 58.873 37.500 0.78 0.00 42.97 2.43
2540 5314 5.373812 TGCCTAAAACAATTTGGGGAAAA 57.626 34.783 0.78 0.00 42.97 2.29
2543 5317 5.072329 TCATTTGCCTAAAACAATTTGGGGA 59.928 36.000 0.78 0.40 44.87 4.81
2544 5318 5.312079 TCATTTGCCTAAAACAATTTGGGG 58.688 37.500 0.78 0.01 44.87 4.96
2545 5319 6.430616 ACATCATTTGCCTAAAACAATTTGGG 59.569 34.615 0.78 0.00 46.81 4.12
2546 5320 7.437793 ACATCATTTGCCTAAAACAATTTGG 57.562 32.000 0.78 0.00 0.00 3.28
2547 5321 9.171701 CAAACATCATTTGCCTAAAACAATTTG 57.828 29.630 0.00 0.00 0.00 2.32
2548 5322 7.861872 GCAAACATCATTTGCCTAAAACAATTT 59.138 29.630 12.31 0.00 46.51 1.82
2549 5323 7.361894 GCAAACATCATTTGCCTAAAACAATT 58.638 30.769 12.31 0.00 46.51 2.32
2550 5324 6.901265 GCAAACATCATTTGCCTAAAACAAT 58.099 32.000 12.31 0.00 46.51 2.71
2551 5325 6.297694 GCAAACATCATTTGCCTAAAACAA 57.702 33.333 12.31 0.00 46.51 2.83
2552 5326 5.921004 GCAAACATCATTTGCCTAAAACA 57.079 34.783 12.31 0.00 46.51 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.