Multiple sequence alignment - TraesCS5D01G548800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G548800 chr5D 100.000 9958 0 0 1 9958 556225523 556235480 0.000000e+00 18390.0
1 TraesCS5D01G548800 chr5D 87.220 446 25 6 15 430 9944983 9944540 7.000000e-131 479.0
2 TraesCS5D01G548800 chr5D 92.453 53 2 2 2315 2367 177683459 177683509 3.860000e-09 75.0
3 TraesCS5D01G548800 chr4A 97.508 4013 79 12 2307 6311 613614085 613610086 0.000000e+00 6837.0
4 TraesCS5D01G548800 chr4A 94.959 1706 48 13 6303 7982 613609115 613607422 0.000000e+00 2639.0
5 TraesCS5D01G548800 chr4A 89.243 1599 69 29 458 1992 613615627 613614068 0.000000e+00 1905.0
6 TraesCS5D01G548800 chr4A 95.521 960 21 8 7980 8935 613607207 613606266 0.000000e+00 1515.0
7 TraesCS5D01G548800 chr4A 83.582 536 39 19 9146 9680 613606171 613605684 3.280000e-124 457.0
8 TraesCS5D01G548800 chr4A 89.944 179 15 1 9711 9886 613605616 613605438 2.800000e-55 228.0
9 TraesCS5D01G548800 chr4A 92.308 130 9 1 8999 9128 613606260 613606132 6.140000e-42 183.0
10 TraesCS5D01G548800 chr4A 90.678 118 7 4 867 982 640174877 640174762 4.820000e-33 154.0
11 TraesCS5D01G548800 chr4A 95.122 41 2 0 1989 2029 742331369 742331409 2.320000e-06 65.8
12 TraesCS5D01G548800 chr4A 100.000 28 0 0 1992 2019 586730510 586730483 1.800000e-02 52.8
13 TraesCS5D01G548800 chr5B 97.647 3485 59 12 2851 6330 694525102 694521636 0.000000e+00 5960.0
14 TraesCS5D01G548800 chr5B 94.761 2615 79 23 6369 8935 694521633 694519029 0.000000e+00 4017.0
15 TraesCS5D01G548800 chr5B 93.672 964 40 8 8999 9958 694519023 694518077 0.000000e+00 1423.0
16 TraesCS5D01G548800 chr5B 84.166 1061 74 31 970 1979 694526641 694525624 0.000000e+00 942.0
17 TraesCS5D01G548800 chr5B 95.712 513 19 3 2306 2816 694525619 694525108 0.000000e+00 822.0
18 TraesCS5D01G548800 chr5B 85.683 454 35 13 1 430 591057713 591057266 1.530000e-122 451.0
19 TraesCS5D01G548800 chr5B 82.960 446 55 11 1 430 692353716 692354156 5.640000e-102 383.0
20 TraesCS5D01G548800 chr5B 89.510 143 13 2 7613 7753 671288565 671288707 7.950000e-41 180.0
21 TraesCS5D01G548800 chr5B 91.667 84 7 0 9756 9839 671265006 671265089 6.320000e-22 117.0
22 TraesCS5D01G548800 chr5B 84.483 116 11 6 9411 9524 671255565 671255675 3.800000e-19 108.0
23 TraesCS5D01G548800 chr5B 90.123 81 7 1 8413 8492 671294306 671294386 4.920000e-18 104.0
24 TraesCS5D01G548800 chr5B 92.453 53 2 2 2315 2367 192382492 192382542 3.860000e-09 75.0
25 TraesCS5D01G548800 chr5A 88.938 452 27 8 1 430 7834533 7834083 4.090000e-148 536.0
26 TraesCS5D01G548800 chr5A 92.715 151 10 1 129 279 39762309 39762458 6.060000e-52 217.0
27 TraesCS5D01G548800 chr5A 91.447 152 12 1 128 279 505500333 505500183 3.650000e-49 207.0
28 TraesCS5D01G548800 chr3A 87.473 463 33 9 1 442 516837370 516837828 2.480000e-140 510.0
29 TraesCS5D01G548800 chr1A 87.069 464 34 6 1 442 186752017 186751558 1.490000e-137 501.0
30 TraesCS5D01G548800 chr1A 86.533 349 15 12 1 338 435393582 435393255 1.230000e-93 355.0
31 TraesCS5D01G548800 chr1D 85.903 454 39 13 3 442 238061741 238061299 2.530000e-125 460.0
32 TraesCS5D01G548800 chr1D 84.211 114 6 5 542 654 459895821 459895719 6.360000e-17 100.0
33 TraesCS5D01G548800 chr2D 84.464 457 48 12 2 442 229053465 229053914 7.150000e-116 429.0
34 TraesCS5D01G548800 chr2D 92.000 50 3 1 2313 2362 220977116 220977068 1.790000e-07 69.4
35 TraesCS5D01G548800 chr7A 93.594 281 14 4 1 279 730913031 730912753 5.560000e-112 416.0
36 TraesCS5D01G548800 chr1B 83.333 444 54 10 1 430 399300356 399299919 9.380000e-105 392.0
37 TraesCS5D01G548800 chr1B 91.946 149 11 1 128 276 377075691 377075838 3.650000e-49 207.0
38 TraesCS5D01G548800 chr1B 88.333 60 4 3 2315 2372 3949886 3949828 1.790000e-07 69.4
39 TraesCS5D01G548800 chr1B 94.872 39 2 0 616 654 173132883 173132845 3.000000e-05 62.1
40 TraesCS5D01G548800 chr2B 84.195 329 24 9 1 320 405275781 405276090 2.720000e-75 294.0
41 TraesCS5D01G548800 chr2B 90.286 175 13 4 258 430 617530124 617530296 1.010000e-54 226.0
42 TraesCS5D01G548800 chr2B 92.453 53 3 1 2311 2363 358674746 358674797 3.860000e-09 75.0
43 TraesCS5D01G548800 chr2B 100.000 35 0 0 424 458 126946755 126946789 2.320000e-06 65.8
44 TraesCS5D01G548800 chr2B 100.000 35 0 0 424 458 155962792 155962758 2.320000e-06 65.8
45 TraesCS5D01G548800 chr2B 100.000 34 0 0 424 457 405279100 405279133 8.350000e-06 63.9
46 TraesCS5D01G548800 chr2B 100.000 34 0 0 424 457 596089328 596089295 8.350000e-06 63.9
47 TraesCS5D01G548800 chr2B 97.368 38 0 1 424 460 614113559 614113522 8.350000e-06 63.9
48 TraesCS5D01G548800 chr2B 97.297 37 0 1 421 457 20551826 20551791 3.000000e-05 62.1
49 TraesCS5D01G548800 chr2B 97.222 36 1 0 1994 2029 182353508 182353543 3.000000e-05 62.1
50 TraesCS5D01G548800 chr2B 100.000 28 0 0 431 458 662906946 662906919 1.800000e-02 52.8
51 TraesCS5D01G548800 chr4B 92.994 157 9 2 125 281 237026263 237026417 2.800000e-55 228.0
52 TraesCS5D01G548800 chr4B 75.862 261 47 13 2044 2293 278321631 278321886 1.760000e-22 119.0
53 TraesCS5D01G548800 chr2A 92.453 53 3 1 2311 2363 373869004 373868953 3.860000e-09 75.0
54 TraesCS5D01G548800 chr2A 92.000 50 3 1 2313 2362 240483153 240483105 1.790000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G548800 chr5D 556225523 556235480 9957 False 18390.000000 18390 100.000000 1 9958 1 chr5D.!!$F2 9957
1 TraesCS5D01G548800 chr4A 613605438 613615627 10189 True 1966.285714 6837 91.866429 458 9886 7 chr4A.!!$R3 9428
2 TraesCS5D01G548800 chr5B 694518077 694526641 8564 True 2632.800000 5960 93.191600 970 9958 5 chr5B.!!$R2 8988

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
395 396 0.031043 AAAAGTTAAACGGGCCGTGC 59.969 50.000 34.87 21.88 39.99 5.34 F
1630 1704 0.171231 TGCTCCGACGTCATTCTCTG 59.829 55.000 17.16 0.00 0.00 3.35 F
2213 2296 0.036388 TGTTCGATCCCTGGTTCTGC 60.036 55.000 0.00 0.00 0.00 4.26 F
2230 2313 0.105913 TGCCCCGTTTTTCTTCCCTT 60.106 50.000 0.00 0.00 0.00 3.95 F
2231 2314 1.045407 GCCCCGTTTTTCTTCCCTTT 58.955 50.000 0.00 0.00 0.00 3.11 F
2232 2315 1.414919 GCCCCGTTTTTCTTCCCTTTT 59.585 47.619 0.00 0.00 0.00 2.27 F
2760 2845 1.476833 GCCGGGCATCTATCCTTTTGA 60.477 52.381 15.62 0.00 0.00 2.69 F
5213 5309 1.817099 CCTCACGCCCTCATGCTTC 60.817 63.158 0.00 0.00 0.00 3.86 F
5882 5979 1.163309 TCACCCACTTCCCTCCCAT 59.837 57.895 0.00 0.00 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2194 2277 0.036388 GCAGAACCAGGGATCGAACA 60.036 55.000 0.00 0.00 0.00 3.18 R
2522 2606 1.542472 CATTTGACACAGCAGGCATGA 59.458 47.619 0.62 0.00 0.00 3.07 R
4120 4215 0.109153 TGTGACCTGATGCAACTGCT 59.891 50.000 2.95 0.00 42.66 4.24 R
4578 4674 4.380867 CCAAATTAGGCAAGGTGATGACAC 60.381 45.833 0.00 0.00 45.27 3.67 R
5099 5195 1.452110 TCATGCGTTGTGATTCCCTG 58.548 50.000 0.00 0.00 0.00 4.45 R
5463 5559 8.809468 AAAGAGAGAGAAAAAGTAACCAAAGT 57.191 30.769 0.00 0.00 0.00 2.66 R
5747 5844 1.442769 CCACCAGAAATCGTCCACAG 58.557 55.000 0.00 0.00 0.00 3.66 R
6840 7934 0.308684 CACTGCGCACATGTGTTCTT 59.691 50.000 26.01 5.59 0.00 2.52 R
8974 10317 0.391793 GGCCTATTCGCTGCCTATCC 60.392 60.000 0.00 0.00 42.01 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 4.937431 GCCTATCTGGGCCGGCAC 62.937 72.222 30.85 28.40 45.92 5.01
64 65 3.964875 GCATGCCGGCCCGTTATG 61.965 66.667 26.77 21.10 0.00 1.90
65 66 3.286751 CATGCCGGCCCGTTATGG 61.287 66.667 26.77 1.53 37.55 2.74
73 74 3.202001 CCCGTTATGGCACGCTGG 61.202 66.667 0.00 0.00 38.93 4.85
74 75 3.202001 CCGTTATGGCACGCTGGG 61.202 66.667 0.00 0.00 38.93 4.45
75 76 2.435938 CGTTATGGCACGCTGGGT 60.436 61.111 0.00 0.00 32.43 4.51
76 77 2.461110 CGTTATGGCACGCTGGGTC 61.461 63.158 0.00 0.00 32.43 4.46
77 78 2.125310 TTATGGCACGCTGGGTCG 60.125 61.111 0.00 0.00 0.00 4.79
78 79 4.830765 TATGGCACGCTGGGTCGC 62.831 66.667 0.00 2.80 0.00 5.19
94 95 2.490991 GTCGCCTGACCCATATTTACC 58.509 52.381 0.00 0.00 39.30 2.85
95 96 2.104281 GTCGCCTGACCCATATTTACCT 59.896 50.000 0.00 0.00 39.30 3.08
96 97 2.367567 TCGCCTGACCCATATTTACCTC 59.632 50.000 0.00 0.00 0.00 3.85
97 98 2.767505 GCCTGACCCATATTTACCTCG 58.232 52.381 0.00 0.00 0.00 4.63
98 99 2.550208 GCCTGACCCATATTTACCTCGG 60.550 54.545 0.00 0.00 0.00 4.63
99 100 2.550208 CCTGACCCATATTTACCTCGGC 60.550 54.545 0.00 0.00 0.00 5.54
100 101 2.368875 CTGACCCATATTTACCTCGGCT 59.631 50.000 0.00 0.00 0.00 5.52
101 102 2.104111 TGACCCATATTTACCTCGGCTG 59.896 50.000 0.00 0.00 0.00 4.85
102 103 1.420138 ACCCATATTTACCTCGGCTGG 59.580 52.381 0.00 0.00 0.00 4.85
103 104 1.523758 CCATATTTACCTCGGCTGGC 58.476 55.000 0.00 0.00 0.00 4.85
104 105 1.148310 CATATTTACCTCGGCTGGCG 58.852 55.000 18.26 18.26 0.00 5.69
105 106 0.602905 ATATTTACCTCGGCTGGCGC 60.603 55.000 19.55 0.00 0.00 6.53
106 107 2.964438 TATTTACCTCGGCTGGCGCG 62.964 60.000 19.55 13.07 36.88 6.86
111 112 4.445545 CTCGGCTGGCGCGTTTTC 62.446 66.667 19.55 0.00 36.88 2.29
118 119 4.717313 GGCGCGTTTTCCCCCTCT 62.717 66.667 8.43 0.00 0.00 3.69
119 120 3.431725 GCGCGTTTTCCCCCTCTG 61.432 66.667 8.43 0.00 0.00 3.35
120 121 2.032071 CGCGTTTTCCCCCTCTGT 59.968 61.111 0.00 0.00 0.00 3.41
121 122 1.294138 CGCGTTTTCCCCCTCTGTA 59.706 57.895 0.00 0.00 0.00 2.74
122 123 1.017701 CGCGTTTTCCCCCTCTGTAC 61.018 60.000 0.00 0.00 0.00 2.90
123 124 0.035739 GCGTTTTCCCCCTCTGTACA 59.964 55.000 0.00 0.00 0.00 2.90
124 125 1.944430 GCGTTTTCCCCCTCTGTACAG 60.944 57.143 17.17 17.17 0.00 2.74
125 126 1.822506 GTTTTCCCCCTCTGTACAGC 58.177 55.000 18.45 0.00 0.00 4.40
126 127 0.323629 TTTTCCCCCTCTGTACAGCG 59.676 55.000 18.45 12.14 0.00 5.18
127 128 0.543410 TTTCCCCCTCTGTACAGCGA 60.543 55.000 18.45 1.03 0.00 4.93
128 129 0.543410 TTCCCCCTCTGTACAGCGAA 60.543 55.000 18.45 10.62 0.00 4.70
129 130 0.543410 TCCCCCTCTGTACAGCGAAA 60.543 55.000 18.45 0.00 0.00 3.46
130 131 0.323629 CCCCCTCTGTACAGCGAAAA 59.676 55.000 18.45 0.00 0.00 2.29
131 132 1.271163 CCCCCTCTGTACAGCGAAAAA 60.271 52.381 18.45 0.00 0.00 1.94
195 196 9.706691 TGGGATAAATCTAGAGTTTTATTAGCG 57.293 33.333 11.16 0.00 32.87 4.26
196 197 8.657729 GGGATAAATCTAGAGTTTTATTAGCGC 58.342 37.037 11.16 0.00 32.87 5.92
197 198 9.425577 GGATAAATCTAGAGTTTTATTAGCGCT 57.574 33.333 17.26 17.26 32.87 5.92
200 201 5.968387 TCTAGAGTTTTATTAGCGCTTGC 57.032 39.130 18.68 0.00 39.58 4.01
201 202 4.809426 TCTAGAGTTTTATTAGCGCTTGCC 59.191 41.667 18.68 0.00 40.41 4.52
202 203 3.610911 AGAGTTTTATTAGCGCTTGCCT 58.389 40.909 18.68 1.84 40.41 4.75
203 204 3.623510 AGAGTTTTATTAGCGCTTGCCTC 59.376 43.478 18.68 11.57 40.41 4.70
204 205 3.343617 AGTTTTATTAGCGCTTGCCTCA 58.656 40.909 18.68 0.00 40.41 3.86
205 206 3.947834 AGTTTTATTAGCGCTTGCCTCAT 59.052 39.130 18.68 1.05 40.41 2.90
206 207 4.399303 AGTTTTATTAGCGCTTGCCTCATT 59.601 37.500 18.68 0.00 40.41 2.57
207 208 5.588648 AGTTTTATTAGCGCTTGCCTCATTA 59.411 36.000 18.68 0.00 40.41 1.90
208 209 6.094881 AGTTTTATTAGCGCTTGCCTCATTAA 59.905 34.615 18.68 0.00 40.41 1.40
209 210 6.443934 TTTATTAGCGCTTGCCTCATTAAA 57.556 33.333 18.68 6.90 40.41 1.52
210 211 4.981806 ATTAGCGCTTGCCTCATTAAAA 57.018 36.364 18.68 0.00 40.41 1.52
211 212 4.981806 TTAGCGCTTGCCTCATTAAAAT 57.018 36.364 18.68 0.00 40.41 1.82
212 213 3.427161 AGCGCTTGCCTCATTAAAATC 57.573 42.857 2.64 0.00 40.41 2.17
213 214 3.019564 AGCGCTTGCCTCATTAAAATCT 58.980 40.909 2.64 0.00 40.41 2.40
214 215 3.445096 AGCGCTTGCCTCATTAAAATCTT 59.555 39.130 2.64 0.00 40.41 2.40
215 216 3.793492 GCGCTTGCCTCATTAAAATCTTC 59.207 43.478 0.00 0.00 0.00 2.87
216 217 4.354587 CGCTTGCCTCATTAAAATCTTCC 58.645 43.478 0.00 0.00 0.00 3.46
217 218 4.142403 CGCTTGCCTCATTAAAATCTTCCA 60.142 41.667 0.00 0.00 0.00 3.53
218 219 5.450965 CGCTTGCCTCATTAAAATCTTCCAT 60.451 40.000 0.00 0.00 0.00 3.41
219 220 5.981915 GCTTGCCTCATTAAAATCTTCCATC 59.018 40.000 0.00 0.00 0.00 3.51
220 221 6.469782 TTGCCTCATTAAAATCTTCCATCC 57.530 37.500 0.00 0.00 0.00 3.51
221 222 4.895297 TGCCTCATTAAAATCTTCCATCCC 59.105 41.667 0.00 0.00 0.00 3.85
222 223 4.895297 GCCTCATTAAAATCTTCCATCCCA 59.105 41.667 0.00 0.00 0.00 4.37
223 224 5.363580 GCCTCATTAAAATCTTCCATCCCAA 59.636 40.000 0.00 0.00 0.00 4.12
224 225 6.127083 GCCTCATTAAAATCTTCCATCCCAAA 60.127 38.462 0.00 0.00 0.00 3.28
225 226 7.495055 CCTCATTAAAATCTTCCATCCCAAAG 58.505 38.462 0.00 0.00 0.00 2.77
226 227 7.342799 CCTCATTAAAATCTTCCATCCCAAAGA 59.657 37.037 0.00 0.00 36.05 2.52
227 228 8.663209 TCATTAAAATCTTCCATCCCAAAGAA 57.337 30.769 0.00 0.00 35.29 2.52
228 229 8.752187 TCATTAAAATCTTCCATCCCAAAGAAG 58.248 33.333 0.00 0.00 38.68 2.85
229 230 8.534496 CATTAAAATCTTCCATCCCAAAGAAGT 58.466 33.333 0.00 0.00 38.50 3.01
230 231 9.768215 ATTAAAATCTTCCATCCCAAAGAAGTA 57.232 29.630 0.00 0.00 38.50 2.24
231 232 9.594936 TTAAAATCTTCCATCCCAAAGAAGTAA 57.405 29.630 0.00 0.00 38.50 2.24
232 233 8.491045 AAAATCTTCCATCCCAAAGAAGTAAA 57.509 30.769 0.00 0.00 38.50 2.01
233 234 8.491045 AAATCTTCCATCCCAAAGAAGTAAAA 57.509 30.769 0.00 0.00 38.50 1.52
234 235 7.709149 ATCTTCCATCCCAAAGAAGTAAAAG 57.291 36.000 0.00 0.00 38.50 2.27
235 236 6.848069 TCTTCCATCCCAAAGAAGTAAAAGA 58.152 36.000 0.00 0.00 38.50 2.52
236 237 6.942576 TCTTCCATCCCAAAGAAGTAAAAGAG 59.057 38.462 0.00 0.00 38.50 2.85
237 238 6.200878 TCCATCCCAAAGAAGTAAAAGAGT 57.799 37.500 0.00 0.00 0.00 3.24
238 239 7.324388 TCCATCCCAAAGAAGTAAAAGAGTA 57.676 36.000 0.00 0.00 0.00 2.59
239 240 7.166167 TCCATCCCAAAGAAGTAAAAGAGTAC 58.834 38.462 0.00 0.00 0.00 2.73
240 241 6.940298 CCATCCCAAAGAAGTAAAAGAGTACA 59.060 38.462 0.00 0.00 0.00 2.90
241 242 7.447238 CCATCCCAAAGAAGTAAAAGAGTACAA 59.553 37.037 0.00 0.00 0.00 2.41
242 243 8.846211 CATCCCAAAGAAGTAAAAGAGTACAAA 58.154 33.333 0.00 0.00 0.00 2.83
243 244 8.217131 TCCCAAAGAAGTAAAAGAGTACAAAC 57.783 34.615 0.00 0.00 0.00 2.93
244 245 8.050930 TCCCAAAGAAGTAAAAGAGTACAAACT 58.949 33.333 0.00 0.00 39.21 2.66
245 246 9.333724 CCCAAAGAAGTAAAAGAGTACAAACTA 57.666 33.333 0.00 0.00 35.56 2.24
249 250 9.780186 AAGAAGTAAAAGAGTACAAACTATGCT 57.220 29.630 0.00 0.00 35.56 3.79
250 251 9.425577 AGAAGTAAAAGAGTACAAACTATGCTC 57.574 33.333 0.00 0.00 35.56 4.26
251 252 9.425577 GAAGTAAAAGAGTACAAACTATGCTCT 57.574 33.333 0.00 0.00 35.56 4.09
302 303 5.968387 ATTAGAGCACTACAAATGTACGC 57.032 39.130 0.00 3.23 0.00 4.42
303 304 3.313012 AGAGCACTACAAATGTACGCA 57.687 42.857 10.96 0.00 0.00 5.24
304 305 3.861840 AGAGCACTACAAATGTACGCAT 58.138 40.909 10.96 0.00 36.80 4.73
305 306 3.618594 AGAGCACTACAAATGTACGCATG 59.381 43.478 10.96 0.00 35.15 4.06
306 307 3.334691 AGCACTACAAATGTACGCATGT 58.665 40.909 10.96 3.27 35.15 3.21
307 308 4.500127 AGCACTACAAATGTACGCATGTA 58.500 39.130 10.96 4.90 35.15 2.29
323 324 9.976255 GTACGCATGTACTACAAAATTATTGAA 57.024 29.630 0.00 0.00 46.07 2.69
324 325 8.889849 ACGCATGTACTACAAAATTATTGAAC 57.110 30.769 0.00 0.00 0.00 3.18
325 326 8.508062 ACGCATGTACTACAAAATTATTGAACA 58.492 29.630 0.00 0.00 0.00 3.18
326 327 9.502145 CGCATGTACTACAAAATTATTGAACAT 57.498 29.630 0.00 0.00 0.00 2.71
394 395 2.495409 AAAAAGTTAAACGGGCCGTG 57.505 45.000 34.87 4.16 39.99 4.94
395 396 0.031043 AAAAGTTAAACGGGCCGTGC 59.969 50.000 34.87 21.88 39.99 5.34
424 425 4.729918 GTGTGCCCAGCCTCCAGG 62.730 72.222 0.00 0.00 38.53 4.45
434 435 2.592308 CCTCCAGGCCCAGTTAGC 59.408 66.667 0.00 0.00 0.00 3.09
435 436 2.300967 CCTCCAGGCCCAGTTAGCA 61.301 63.158 0.00 0.00 0.00 3.49
436 437 1.078143 CTCCAGGCCCAGTTAGCAC 60.078 63.158 0.00 0.00 0.00 4.40
437 438 2.436646 CCAGGCCCAGTTAGCACG 60.437 66.667 0.00 0.00 0.00 5.34
438 439 2.436646 CAGGCCCAGTTAGCACGG 60.437 66.667 0.00 0.00 0.00 4.94
439 440 4.410400 AGGCCCAGTTAGCACGGC 62.410 66.667 0.00 0.00 0.00 5.68
443 444 4.388499 CCAGTTAGCACGGCCCGT 62.388 66.667 1.02 1.02 42.36 5.28
444 445 2.358247 CAGTTAGCACGGCCCGTT 60.358 61.111 5.76 0.00 38.32 4.44
445 446 1.964373 CAGTTAGCACGGCCCGTTT 60.964 57.895 5.76 0.00 38.32 3.60
446 447 1.964373 AGTTAGCACGGCCCGTTTG 60.964 57.895 5.76 0.00 38.32 2.93
447 448 2.670251 TTAGCACGGCCCGTTTGG 60.670 61.111 5.76 0.00 38.32 3.28
460 461 1.583054 CGTTTGGCCAGCTATACCTC 58.417 55.000 5.11 0.00 0.00 3.85
478 479 1.521010 CGCTCCATCTCCTGCACAG 60.521 63.158 0.00 0.00 0.00 3.66
481 482 1.907222 CTCCATCTCCTGCACAGCCA 61.907 60.000 0.00 0.00 0.00 4.75
533 534 1.679514 GTTTTTCTCTCTTGCGCTGC 58.320 50.000 9.73 0.00 0.00 5.25
537 538 0.389556 TTCTCTCTTGCGCTGCTGAG 60.390 55.000 9.73 11.47 33.75 3.35
570 571 1.367848 AGACCCCTCTTCCTTGGATCT 59.632 52.381 0.00 0.00 0.00 2.75
588 589 1.480219 CTGCGTCGACGGCTTATTCC 61.480 60.000 36.13 18.81 40.23 3.01
611 612 5.297527 CCTCTCATCCTCTATCGATCTGATG 59.702 48.000 0.00 10.17 37.99 3.07
612 613 5.814481 TCTCATCCTCTATCGATCTGATGT 58.186 41.667 18.14 0.00 37.99 3.06
613 614 5.647225 TCTCATCCTCTATCGATCTGATGTG 59.353 44.000 18.14 16.63 37.99 3.21
614 615 4.157472 TCATCCTCTATCGATCTGATGTGC 59.843 45.833 18.14 0.00 37.99 4.57
615 616 3.490348 TCCTCTATCGATCTGATGTGCA 58.510 45.455 0.00 0.00 37.99 4.57
616 617 4.085009 TCCTCTATCGATCTGATGTGCAT 58.915 43.478 0.00 0.00 37.99 3.96
685 686 6.677781 TGCATGTTTAGTCCTTATAGTTGC 57.322 37.500 0.00 0.00 0.00 4.17
696 697 5.412904 GTCCTTATAGTTGCAGGCAATATCC 59.587 44.000 10.21 0.00 38.28 2.59
739 740 9.537852 TTAGGAAGTACTTCAATACAGTCCTTA 57.462 33.333 31.30 12.26 40.10 2.69
759 760 5.232202 CCTTATACATATGCGAATACAGCGG 59.768 44.000 1.58 0.00 37.44 5.52
777 778 0.680061 GGCTATACGGTCCTTGAGGG 59.320 60.000 0.00 0.00 35.41 4.30
780 781 2.385803 CTATACGGTCCTTGAGGGTGT 58.614 52.381 0.00 0.00 36.25 4.16
851 852 0.180406 ATCGGTCCCACATGTTAGCC 59.820 55.000 0.00 0.00 0.00 3.93
870 871 2.200337 AAGCAAACCCTTCCGCCAC 61.200 57.895 0.00 0.00 0.00 5.01
874 875 4.636435 AACCCTTCCGCCACGTGG 62.636 66.667 30.66 30.66 38.53 4.94
884 885 3.047877 CCACGTGGGAAGCGGAAC 61.048 66.667 27.57 0.00 40.01 3.62
1018 1041 2.689471 CCTCTCTCATCTCACCTGTCTG 59.311 54.545 0.00 0.00 0.00 3.51
1052 1075 0.393808 GTGCCGACTCTCTCTCCTCT 60.394 60.000 0.00 0.00 0.00 3.69
1064 1087 3.036959 TCCTCTCCTCCCCTCCCC 61.037 72.222 0.00 0.00 0.00 4.81
1158 1196 4.051167 TCGGAGGTACGGCTCCCA 62.051 66.667 11.34 0.00 36.44 4.37
1253 1294 1.508088 CGCTCTGGGTCAAATTGGC 59.492 57.895 0.00 0.00 0.00 4.52
1374 1425 2.363795 CAGGTCGGGTGGGAGCTA 60.364 66.667 0.00 0.00 42.50 3.32
1413 1487 1.202627 TGTTTGCTTGGGGAATTGCAC 60.203 47.619 0.00 0.00 35.01 4.57
1536 1610 9.606631 AAAATTATTGTTTGGTGCTCAGTTTAA 57.393 25.926 0.00 0.00 0.00 1.52
1537 1611 9.777297 AAATTATTGTTTGGTGCTCAGTTTAAT 57.223 25.926 0.00 0.00 0.00 1.40
1538 1612 9.777297 AATTATTGTTTGGTGCTCAGTTTAATT 57.223 25.926 0.00 0.00 0.00 1.40
1539 1613 9.777297 ATTATTGTTTGGTGCTCAGTTTAATTT 57.223 25.926 0.00 0.00 0.00 1.82
1540 1614 9.606631 TTATTGTTTGGTGCTCAGTTTAATTTT 57.393 25.926 0.00 0.00 0.00 1.82
1595 1669 4.380973 GGCTGAAAATTGGGTAGAAGAAGC 60.381 45.833 0.00 0.00 0.00 3.86
1606 1680 4.095036 GGGTAGAAGAAGCCTCGAAAAATG 59.905 45.833 0.00 0.00 34.08 2.32
1621 1695 0.320771 AAATGCTTCTGCTCCGACGT 60.321 50.000 0.00 0.00 40.48 4.34
1622 1696 0.737715 AATGCTTCTGCTCCGACGTC 60.738 55.000 5.18 5.18 40.48 4.34
1623 1697 1.877576 ATGCTTCTGCTCCGACGTCA 61.878 55.000 17.16 0.00 40.48 4.35
1624 1698 1.153745 GCTTCTGCTCCGACGTCAT 60.154 57.895 17.16 0.00 36.03 3.06
1625 1699 0.737715 GCTTCTGCTCCGACGTCATT 60.738 55.000 17.16 0.00 36.03 2.57
1626 1700 1.272781 CTTCTGCTCCGACGTCATTC 58.727 55.000 17.16 1.83 0.00 2.67
1627 1701 0.888619 TTCTGCTCCGACGTCATTCT 59.111 50.000 17.16 0.00 0.00 2.40
1628 1702 0.452184 TCTGCTCCGACGTCATTCTC 59.548 55.000 17.16 0.73 0.00 2.87
1629 1703 0.453793 CTGCTCCGACGTCATTCTCT 59.546 55.000 17.16 0.00 0.00 3.10
1630 1704 0.171231 TGCTCCGACGTCATTCTCTG 59.829 55.000 17.16 0.00 0.00 3.35
1631 1705 0.526524 GCTCCGACGTCATTCTCTGG 60.527 60.000 17.16 6.71 0.00 3.86
1632 1706 1.095600 CTCCGACGTCATTCTCTGGA 58.904 55.000 17.16 10.86 0.00 3.86
1683 1757 5.006386 ACAAGAAGATCAAGGCAAAGGTAG 58.994 41.667 0.00 0.00 0.00 3.18
1688 1762 7.051000 AGAAGATCAAGGCAAAGGTAGAATAC 58.949 38.462 0.00 0.00 42.04 1.89
1727 1803 6.135290 TGCCATTGTTATCTATTTGCAGTC 57.865 37.500 0.00 0.00 0.00 3.51
1846 1929 3.363970 CCAACGTGTATGTTCACTTCTGC 60.364 47.826 0.00 0.00 36.33 4.26
1892 1975 4.699735 TCTCGTTAACCAATGTTGCATGAT 59.300 37.500 0.00 0.00 35.87 2.45
1911 1994 5.369685 TGATTGTGCAATGTTTGACGTAT 57.630 34.783 1.77 0.00 0.00 3.06
1926 2009 5.661056 TGACGTATGAAATGAGGAGAGTT 57.339 39.130 0.00 0.00 0.00 3.01
1944 2027 7.873505 AGGAGAGTTTACTGAGTTTGATTGTAC 59.126 37.037 0.00 0.00 0.00 2.90
2019 2102 3.961480 AAAAGGGTTATTGCTTCTGGC 57.039 42.857 0.00 0.00 42.22 4.85
2020 2103 1.463674 AAGGGTTATTGCTTCTGGCG 58.536 50.000 0.00 0.00 45.43 5.69
2021 2104 0.394352 AGGGTTATTGCTTCTGGCGG 60.394 55.000 0.00 0.00 45.43 6.13
2022 2105 0.679960 GGGTTATTGCTTCTGGCGGT 60.680 55.000 0.00 0.00 45.43 5.68
2023 2106 1.407712 GGGTTATTGCTTCTGGCGGTA 60.408 52.381 0.00 0.00 45.43 4.02
2024 2107 1.669265 GGTTATTGCTTCTGGCGGTAC 59.331 52.381 0.00 0.00 45.43 3.34
2025 2108 2.352388 GTTATTGCTTCTGGCGGTACA 58.648 47.619 0.00 0.00 45.43 2.90
2026 2109 2.943033 GTTATTGCTTCTGGCGGTACAT 59.057 45.455 0.00 0.00 45.43 2.29
2027 2110 1.668419 ATTGCTTCTGGCGGTACATC 58.332 50.000 0.00 0.00 45.43 3.06
2028 2111 0.323302 TTGCTTCTGGCGGTACATCA 59.677 50.000 0.00 0.00 45.43 3.07
2029 2112 0.391130 TGCTTCTGGCGGTACATCAC 60.391 55.000 0.00 0.00 45.43 3.06
2030 2113 0.391130 GCTTCTGGCGGTACATCACA 60.391 55.000 0.00 0.00 0.00 3.58
2031 2114 1.645034 CTTCTGGCGGTACATCACAG 58.355 55.000 0.00 0.00 0.00 3.66
2032 2115 1.204704 CTTCTGGCGGTACATCACAGA 59.795 52.381 0.00 0.00 36.49 3.41
2033 2116 1.262417 TCTGGCGGTACATCACAGAA 58.738 50.000 0.00 0.00 35.45 3.02
2034 2117 1.621317 TCTGGCGGTACATCACAGAAA 59.379 47.619 0.00 0.00 35.45 2.52
2035 2118 2.236146 TCTGGCGGTACATCACAGAAAT 59.764 45.455 0.00 0.00 35.45 2.17
2036 2119 3.449377 TCTGGCGGTACATCACAGAAATA 59.551 43.478 0.00 0.00 35.45 1.40
2037 2120 4.081365 TCTGGCGGTACATCACAGAAATAA 60.081 41.667 0.00 0.00 35.45 1.40
2038 2121 3.936453 TGGCGGTACATCACAGAAATAAC 59.064 43.478 0.00 0.00 0.00 1.89
2039 2122 3.311596 GGCGGTACATCACAGAAATAACC 59.688 47.826 0.00 0.00 0.00 2.85
2040 2123 3.311596 GCGGTACATCACAGAAATAACCC 59.688 47.826 0.00 0.00 0.00 4.11
2041 2124 3.875134 CGGTACATCACAGAAATAACCCC 59.125 47.826 0.00 0.00 0.00 4.95
2042 2125 4.383770 CGGTACATCACAGAAATAACCCCT 60.384 45.833 0.00 0.00 0.00 4.79
2043 2126 5.163385 CGGTACATCACAGAAATAACCCCTA 60.163 44.000 0.00 0.00 0.00 3.53
2044 2127 6.630863 CGGTACATCACAGAAATAACCCCTAA 60.631 42.308 0.00 0.00 0.00 2.69
2045 2128 7.114095 GGTACATCACAGAAATAACCCCTAAA 58.886 38.462 0.00 0.00 0.00 1.85
2046 2129 7.066645 GGTACATCACAGAAATAACCCCTAAAC 59.933 40.741 0.00 0.00 0.00 2.01
2047 2130 6.790319 ACATCACAGAAATAACCCCTAAACT 58.210 36.000 0.00 0.00 0.00 2.66
2048 2131 7.924541 ACATCACAGAAATAACCCCTAAACTA 58.075 34.615 0.00 0.00 0.00 2.24
2049 2132 8.557450 ACATCACAGAAATAACCCCTAAACTAT 58.443 33.333 0.00 0.00 0.00 2.12
2050 2133 8.840321 CATCACAGAAATAACCCCTAAACTATG 58.160 37.037 0.00 0.00 0.00 2.23
2051 2134 6.826741 TCACAGAAATAACCCCTAAACTATGC 59.173 38.462 0.00 0.00 0.00 3.14
2052 2135 6.039382 CACAGAAATAACCCCTAAACTATGCC 59.961 42.308 0.00 0.00 0.00 4.40
2053 2136 6.126409 CAGAAATAACCCCTAAACTATGCCA 58.874 40.000 0.00 0.00 0.00 4.92
2054 2137 6.039382 CAGAAATAACCCCTAAACTATGCCAC 59.961 42.308 0.00 0.00 0.00 5.01
2055 2138 2.820728 AACCCCTAAACTATGCCACC 57.179 50.000 0.00 0.00 0.00 4.61
2056 2139 0.924090 ACCCCTAAACTATGCCACCC 59.076 55.000 0.00 0.00 0.00 4.61
2057 2140 0.923358 CCCCTAAACTATGCCACCCA 59.077 55.000 0.00 0.00 0.00 4.51
2058 2141 1.499007 CCCCTAAACTATGCCACCCAT 59.501 52.381 0.00 0.00 37.97 4.00
2059 2142 2.714250 CCCCTAAACTATGCCACCCATA 59.286 50.000 0.00 0.00 35.34 2.74
2060 2143 3.139397 CCCCTAAACTATGCCACCCATAA 59.861 47.826 0.00 0.00 36.04 1.90
2061 2144 4.398319 CCCTAAACTATGCCACCCATAAG 58.602 47.826 0.00 0.00 36.04 1.73
2062 2145 4.141251 CCCTAAACTATGCCACCCATAAGT 60.141 45.833 0.00 0.00 36.04 2.24
2063 2146 4.821805 CCTAAACTATGCCACCCATAAGTG 59.178 45.833 0.00 0.00 36.04 3.16
2064 2147 4.584638 AAACTATGCCACCCATAAGTGA 57.415 40.909 0.00 0.00 40.34 3.41
2065 2148 4.584638 AACTATGCCACCCATAAGTGAA 57.415 40.909 0.00 0.00 40.34 3.18
2066 2149 4.156455 ACTATGCCACCCATAAGTGAAG 57.844 45.455 0.00 0.00 40.34 3.02
2067 2150 3.780294 ACTATGCCACCCATAAGTGAAGA 59.220 43.478 0.00 0.00 40.34 2.87
2068 2151 3.737559 ATGCCACCCATAAGTGAAGAA 57.262 42.857 0.00 0.00 40.34 2.52
2069 2152 3.517296 TGCCACCCATAAGTGAAGAAA 57.483 42.857 0.00 0.00 40.34 2.52
2070 2153 3.838565 TGCCACCCATAAGTGAAGAAAA 58.161 40.909 0.00 0.00 40.34 2.29
2071 2154 4.219115 TGCCACCCATAAGTGAAGAAAAA 58.781 39.130 0.00 0.00 40.34 1.94
2072 2155 4.837860 TGCCACCCATAAGTGAAGAAAAAT 59.162 37.500 0.00 0.00 40.34 1.82
2073 2156 5.170748 GCCACCCATAAGTGAAGAAAAATG 58.829 41.667 0.00 0.00 40.34 2.32
2074 2157 5.047377 GCCACCCATAAGTGAAGAAAAATGA 60.047 40.000 0.00 0.00 40.34 2.57
2075 2158 6.351286 GCCACCCATAAGTGAAGAAAAATGAT 60.351 38.462 0.00 0.00 40.34 2.45
2076 2159 7.614494 CCACCCATAAGTGAAGAAAAATGATT 58.386 34.615 0.00 0.00 40.34 2.57
2077 2160 7.761249 CCACCCATAAGTGAAGAAAAATGATTC 59.239 37.037 0.00 0.00 40.34 2.52
2078 2161 7.485913 CACCCATAAGTGAAGAAAAATGATTCG 59.514 37.037 0.00 0.00 40.34 3.34
2079 2162 7.176690 ACCCATAAGTGAAGAAAAATGATTCGT 59.823 33.333 0.00 0.00 34.46 3.85
2080 2163 8.028938 CCCATAAGTGAAGAAAAATGATTCGTT 58.971 33.333 0.00 0.00 34.46 3.85
2081 2164 9.410556 CCATAAGTGAAGAAAAATGATTCGTTT 57.589 29.630 0.00 0.00 34.46 3.60
2101 2184 2.622546 TTTAATTCAGAAACGCCGCC 57.377 45.000 0.00 0.00 0.00 6.13
2102 2185 1.524848 TTAATTCAGAAACGCCGCCA 58.475 45.000 0.00 0.00 0.00 5.69
2103 2186 1.083489 TAATTCAGAAACGCCGCCAG 58.917 50.000 0.00 0.00 0.00 4.85
2104 2187 1.586154 AATTCAGAAACGCCGCCAGG 61.586 55.000 0.00 0.00 41.62 4.45
2105 2188 2.748058 ATTCAGAAACGCCGCCAGGT 62.748 55.000 0.00 0.00 40.50 4.00
2106 2189 2.951475 TTCAGAAACGCCGCCAGGTT 62.951 55.000 0.00 0.00 40.50 3.50
2107 2190 2.203294 AGAAACGCCGCCAGGTTT 60.203 55.556 0.00 0.00 38.95 3.27
2108 2191 1.071814 AGAAACGCCGCCAGGTTTA 59.928 52.632 0.00 0.00 36.55 2.01
2109 2192 0.535553 AGAAACGCCGCCAGGTTTAA 60.536 50.000 0.00 0.00 36.55 1.52
2110 2193 0.524414 GAAACGCCGCCAGGTTTAAT 59.476 50.000 0.00 0.00 36.55 1.40
2111 2194 0.963225 AAACGCCGCCAGGTTTAATT 59.037 45.000 0.00 0.00 40.50 1.40
2112 2195 0.524414 AACGCCGCCAGGTTTAATTC 59.476 50.000 0.00 0.00 40.50 2.17
2113 2196 0.322187 ACGCCGCCAGGTTTAATTCT 60.322 50.000 0.00 0.00 40.50 2.40
2114 2197 0.808755 CGCCGCCAGGTTTAATTCTT 59.191 50.000 0.00 0.00 40.50 2.52
2115 2198 1.201414 CGCCGCCAGGTTTAATTCTTT 59.799 47.619 0.00 0.00 40.50 2.52
2116 2199 2.352323 CGCCGCCAGGTTTAATTCTTTT 60.352 45.455 0.00 0.00 40.50 2.27
2117 2200 3.119779 CGCCGCCAGGTTTAATTCTTTTA 60.120 43.478 0.00 0.00 40.50 1.52
2118 2201 4.171005 GCCGCCAGGTTTAATTCTTTTAC 58.829 43.478 0.00 0.00 40.50 2.01
2119 2202 4.321378 GCCGCCAGGTTTAATTCTTTTACA 60.321 41.667 0.00 0.00 40.50 2.41
2120 2203 5.623596 GCCGCCAGGTTTAATTCTTTTACAT 60.624 40.000 0.00 0.00 40.50 2.29
2121 2204 6.404954 GCCGCCAGGTTTAATTCTTTTACATA 60.405 38.462 0.00 0.00 40.50 2.29
2122 2205 7.193595 CCGCCAGGTTTAATTCTTTTACATAG 58.806 38.462 0.00 0.00 0.00 2.23
2123 2206 7.066525 CCGCCAGGTTTAATTCTTTTACATAGA 59.933 37.037 0.00 0.00 0.00 1.98
2124 2207 8.621286 CGCCAGGTTTAATTCTTTTACATAGAT 58.379 33.333 0.00 0.00 0.00 1.98
2140 2223 9.462606 TTTACATAGATACTCTCACAGAAGACA 57.537 33.333 0.00 0.00 0.00 3.41
2141 2224 7.566760 ACATAGATACTCTCACAGAAGACAG 57.433 40.000 0.00 0.00 0.00 3.51
2142 2225 6.545666 ACATAGATACTCTCACAGAAGACAGG 59.454 42.308 0.00 0.00 0.00 4.00
2143 2226 5.186256 AGATACTCTCACAGAAGACAGGA 57.814 43.478 0.00 0.00 0.00 3.86
2144 2227 5.575157 AGATACTCTCACAGAAGACAGGAA 58.425 41.667 0.00 0.00 0.00 3.36
2145 2228 5.417580 AGATACTCTCACAGAAGACAGGAAC 59.582 44.000 0.00 0.00 0.00 3.62
2146 2229 3.300388 ACTCTCACAGAAGACAGGAACA 58.700 45.455 0.00 0.00 0.00 3.18
2147 2230 3.068873 ACTCTCACAGAAGACAGGAACAC 59.931 47.826 0.00 0.00 0.00 3.32
2148 2231 2.034685 TCTCACAGAAGACAGGAACACG 59.965 50.000 0.00 0.00 0.00 4.49
2149 2232 2.028876 TCACAGAAGACAGGAACACGA 58.971 47.619 0.00 0.00 0.00 4.35
2150 2233 2.034685 TCACAGAAGACAGGAACACGAG 59.965 50.000 0.00 0.00 0.00 4.18
2151 2234 2.032620 ACAGAAGACAGGAACACGAGT 58.967 47.619 0.00 0.00 0.00 4.18
2152 2235 3.004419 CACAGAAGACAGGAACACGAGTA 59.996 47.826 0.00 0.00 0.00 2.59
2153 2236 3.253677 ACAGAAGACAGGAACACGAGTAG 59.746 47.826 0.00 0.00 0.00 2.57
2154 2237 3.253677 CAGAAGACAGGAACACGAGTAGT 59.746 47.826 0.00 0.00 0.00 2.73
2165 2248 3.503827 CACGAGTAGTGTGATGGCTAA 57.496 47.619 0.00 0.00 45.51 3.09
2166 2249 3.439293 CACGAGTAGTGTGATGGCTAAG 58.561 50.000 0.00 0.00 45.51 2.18
2167 2250 2.427453 ACGAGTAGTGTGATGGCTAAGG 59.573 50.000 0.00 0.00 0.00 2.69
2168 2251 2.799917 CGAGTAGTGTGATGGCTAAGGC 60.800 54.545 0.00 0.00 37.82 4.35
2191 2274 2.372852 GCCTTCCACAGGGTAGACA 58.627 57.895 0.00 0.00 44.16 3.41
2192 2275 0.912486 GCCTTCCACAGGGTAGACAT 59.088 55.000 0.00 0.00 44.16 3.06
2193 2276 1.407437 GCCTTCCACAGGGTAGACATG 60.407 57.143 0.00 0.00 44.16 3.21
2194 2277 1.909302 CCTTCCACAGGGTAGACATGT 59.091 52.381 0.00 0.00 39.39 3.21
2195 2278 2.355108 CCTTCCACAGGGTAGACATGTG 60.355 54.545 1.15 5.27 43.11 3.21
2196 2279 2.024176 TCCACAGGGTAGACATGTGT 57.976 50.000 1.15 0.22 42.17 3.72
2197 2280 2.334977 TCCACAGGGTAGACATGTGTT 58.665 47.619 1.15 0.00 42.17 3.32
2198 2281 2.301870 TCCACAGGGTAGACATGTGTTC 59.698 50.000 1.15 0.00 42.17 3.18
2199 2282 2.337583 CACAGGGTAGACATGTGTTCG 58.662 52.381 1.15 0.00 39.54 3.95
2200 2283 2.029380 CACAGGGTAGACATGTGTTCGA 60.029 50.000 1.15 0.00 39.54 3.71
2201 2284 2.832129 ACAGGGTAGACATGTGTTCGAT 59.168 45.455 1.15 0.00 0.00 3.59
2202 2285 3.119101 ACAGGGTAGACATGTGTTCGATC 60.119 47.826 1.15 0.00 0.00 3.69
2203 2286 2.431057 AGGGTAGACATGTGTTCGATCC 59.569 50.000 1.15 0.00 0.00 3.36
2204 2287 2.483188 GGGTAGACATGTGTTCGATCCC 60.483 54.545 1.15 3.78 0.00 3.85
2205 2288 2.431057 GGTAGACATGTGTTCGATCCCT 59.569 50.000 1.15 0.00 0.00 4.20
2206 2289 2.680312 AGACATGTGTTCGATCCCTG 57.320 50.000 1.15 0.00 0.00 4.45
2207 2290 1.208052 AGACATGTGTTCGATCCCTGG 59.792 52.381 1.15 0.00 0.00 4.45
2208 2291 0.984230 ACATGTGTTCGATCCCTGGT 59.016 50.000 0.00 0.00 0.00 4.00
2209 2292 1.351017 ACATGTGTTCGATCCCTGGTT 59.649 47.619 0.00 0.00 0.00 3.67
2210 2293 2.009774 CATGTGTTCGATCCCTGGTTC 58.990 52.381 0.00 0.00 0.00 3.62
2211 2294 1.348064 TGTGTTCGATCCCTGGTTCT 58.652 50.000 0.00 0.00 0.00 3.01
2212 2295 1.001974 TGTGTTCGATCCCTGGTTCTG 59.998 52.381 0.00 0.00 0.00 3.02
2213 2296 0.036388 TGTTCGATCCCTGGTTCTGC 60.036 55.000 0.00 0.00 0.00 4.26
2214 2297 0.744771 GTTCGATCCCTGGTTCTGCC 60.745 60.000 0.00 0.00 37.90 4.85
2215 2298 1.910580 TTCGATCCCTGGTTCTGCCC 61.911 60.000 0.00 0.00 36.04 5.36
2216 2299 2.597903 GATCCCTGGTTCTGCCCC 59.402 66.667 0.00 0.00 36.04 5.80
2217 2300 3.406595 GATCCCTGGTTCTGCCCCG 62.407 68.421 0.00 0.00 36.04 5.73
2218 2301 4.974438 TCCCTGGTTCTGCCCCGT 62.974 66.667 0.00 0.00 36.04 5.28
2219 2302 3.966543 CCCTGGTTCTGCCCCGTT 61.967 66.667 0.00 0.00 36.04 4.44
2220 2303 2.115266 CCTGGTTCTGCCCCGTTT 59.885 61.111 0.00 0.00 36.04 3.60
2221 2304 1.530655 CCTGGTTCTGCCCCGTTTT 60.531 57.895 0.00 0.00 36.04 2.43
2222 2305 1.112916 CCTGGTTCTGCCCCGTTTTT 61.113 55.000 0.00 0.00 36.04 1.94
2223 2306 0.313987 CTGGTTCTGCCCCGTTTTTC 59.686 55.000 0.00 0.00 36.04 2.29
2224 2307 0.106419 TGGTTCTGCCCCGTTTTTCT 60.106 50.000 0.00 0.00 36.04 2.52
2225 2308 1.037493 GGTTCTGCCCCGTTTTTCTT 58.963 50.000 0.00 0.00 0.00 2.52
2226 2309 1.000607 GGTTCTGCCCCGTTTTTCTTC 60.001 52.381 0.00 0.00 0.00 2.87
2227 2310 1.000607 GTTCTGCCCCGTTTTTCTTCC 60.001 52.381 0.00 0.00 0.00 3.46
2228 2311 0.538746 TCTGCCCCGTTTTTCTTCCC 60.539 55.000 0.00 0.00 0.00 3.97
2229 2312 0.539669 CTGCCCCGTTTTTCTTCCCT 60.540 55.000 0.00 0.00 0.00 4.20
2230 2313 0.105913 TGCCCCGTTTTTCTTCCCTT 60.106 50.000 0.00 0.00 0.00 3.95
2231 2314 1.045407 GCCCCGTTTTTCTTCCCTTT 58.955 50.000 0.00 0.00 0.00 3.11
2232 2315 1.414919 GCCCCGTTTTTCTTCCCTTTT 59.585 47.619 0.00 0.00 0.00 2.27
2233 2316 2.158871 GCCCCGTTTTTCTTCCCTTTTT 60.159 45.455 0.00 0.00 0.00 1.94
2247 2330 3.253955 TTTTTCTCTCCAGCGCGC 58.746 55.556 26.66 26.66 0.00 6.86
2248 2331 2.325082 TTTTTCTCTCCAGCGCGCC 61.325 57.895 30.33 10.31 0.00 6.53
2249 2332 2.731691 TTTTTCTCTCCAGCGCGCCT 62.732 55.000 30.33 12.83 0.00 5.52
2250 2333 3.649277 TTTCTCTCCAGCGCGCCTC 62.649 63.158 30.33 0.00 0.00 4.70
2263 2346 4.247380 GCCTCCTCCTCCCGCATG 62.247 72.222 0.00 0.00 0.00 4.06
2264 2347 4.247380 CCTCCTCCTCCCGCATGC 62.247 72.222 7.91 7.91 0.00 4.06
2265 2348 4.598894 CTCCTCCTCCCGCATGCG 62.599 72.222 32.60 32.60 39.44 4.73
2295 2378 2.566010 CCCATTTGCGGGTCAACG 59.434 61.111 0.00 0.00 41.83 4.10
2304 2387 4.754667 GGGTCAACGCGTCCCCTC 62.755 72.222 25.92 9.64 37.01 4.30
2488 2572 6.680810 TGCTGACTCCACTGAATTTAAAATG 58.319 36.000 0.00 0.00 0.00 2.32
2522 2606 3.539338 AAAAAGGCTGCTGACCCTT 57.461 47.368 0.00 0.00 43.07 3.95
2572 2656 2.362397 TCCACTATCCTCTTCGACATGC 59.638 50.000 0.00 0.00 0.00 4.06
2573 2657 2.389059 CACTATCCTCTTCGACATGCG 58.611 52.381 0.00 0.00 42.69 4.73
2618 2703 4.137116 AGTTCACGAGCTATGGCATTAA 57.863 40.909 4.78 0.00 41.70 1.40
2681 2766 1.949525 GTCACCAGAGCAAAAGCTTGA 59.050 47.619 0.00 0.00 34.14 3.02
2719 2804 6.151144 GGAACTTACACATTTGCTTATGTCCT 59.849 38.462 1.91 0.00 36.64 3.85
2760 2845 1.476833 GCCGGGCATCTATCCTTTTGA 60.477 52.381 15.62 0.00 0.00 2.69
3724 3814 9.053840 TGTGATGCATTGTTTTTGTAATCATTT 57.946 25.926 0.00 0.00 0.00 2.32
3747 3837 3.944015 GACCAAGCAGCATCAGTTTATCT 59.056 43.478 0.00 0.00 0.00 1.98
3748 3838 4.338879 ACCAAGCAGCATCAGTTTATCTT 58.661 39.130 0.00 0.00 0.00 2.40
3749 3839 4.768968 ACCAAGCAGCATCAGTTTATCTTT 59.231 37.500 0.00 0.00 0.00 2.52
3820 3915 7.534085 TTACAGTTCTGTTTATTAGCCGATG 57.466 36.000 10.74 0.00 0.00 3.84
3871 3966 8.091449 GCTACTGTTCTATTGCAGGTTAGATAT 58.909 37.037 4.54 0.00 37.07 1.63
4418 4514 9.772973 ACTTCATTATGCGTTCCTGTTATATAA 57.227 29.630 0.00 0.00 0.00 0.98
4578 4674 5.931146 GGCTATCCACATCTTGAGTCTAATG 59.069 44.000 0.00 0.00 0.00 1.90
5099 5195 8.024865 GGTGGTGTTATTGTGATTAACTTTACC 58.975 37.037 0.00 0.00 0.00 2.85
5213 5309 1.817099 CCTCACGCCCTCATGCTTC 60.817 63.158 0.00 0.00 0.00 3.86
5463 5559 2.642311 TCTTTGCAGGTGATCCCTTGTA 59.358 45.455 0.35 0.00 42.73 2.41
5557 5653 4.314961 TGCCTTCACTGTTGTGTATACAG 58.685 43.478 5.62 0.00 46.56 2.74
5589 5685 6.352016 TCTATGCTCCATTCTTACCTCATC 57.648 41.667 0.00 0.00 0.00 2.92
5599 5695 7.619698 TCCATTCTTACCTCATCTCTGAACTTA 59.380 37.037 0.00 0.00 0.00 2.24
5682 5778 4.621034 GGGATTGTGCTTTTATGTTTGACG 59.379 41.667 0.00 0.00 0.00 4.35
5747 5844 2.042944 GGTGCCCATTTCTCCCCC 60.043 66.667 0.00 0.00 0.00 5.40
5812 5909 2.112279 ACAGAAGGTGACCAGGGTAA 57.888 50.000 3.63 0.00 0.00 2.85
5882 5979 1.163309 TCACCCACTTCCCTCCCAT 59.837 57.895 0.00 0.00 0.00 4.00
5935 6032 4.825085 TCTTGAGGAGGCAACGTAATTTTT 59.175 37.500 0.00 0.00 46.39 1.94
5966 6063 9.130312 CTGTTGACTGTTCTATTACTGTAGTTC 57.870 37.037 0.00 0.00 31.42 3.01
5984 6081 7.201145 TGTAGTTCGTTCTTTATCAGCCTATC 58.799 38.462 0.00 0.00 0.00 2.08
6011 6108 8.168058 AGGTTACTGTTTTGTAAATGGTATCCT 58.832 33.333 0.00 0.00 34.67 3.24
6012 6109 8.799367 GGTTACTGTTTTGTAAATGGTATCCTT 58.201 33.333 0.00 0.00 34.67 3.36
6094 6191 1.732259 AGAGCGGCTCATTGTTTAACG 59.268 47.619 29.88 0.00 32.06 3.18
6135 6232 4.576216 TCACTTTTGTTTGTGTGTGTGT 57.424 36.364 0.00 0.00 35.82 3.72
6136 6233 4.294232 TCACTTTTGTTTGTGTGTGTGTG 58.706 39.130 0.00 0.00 35.82 3.82
6242 6339 2.642700 GCCGCATTGACCACGTTT 59.357 55.556 0.00 0.00 0.00 3.60
6250 6347 4.377533 CGCATTGACCACGTTTGTGTAATA 60.378 41.667 0.00 0.00 44.92 0.98
6285 6382 1.809207 GCACTTGCCGCATAACCAT 59.191 52.632 0.00 0.00 34.31 3.55
6288 6385 1.202114 CACTTGCCGCATAACCATGTT 59.798 47.619 0.00 0.00 34.40 2.71
6295 6392 2.418471 CCGCATAACCATGTTGGCAAAT 60.418 45.455 0.00 0.00 42.67 2.32
6367 7443 3.953542 ACAAACAAGAACCCTCCTTCT 57.046 42.857 0.00 0.00 31.41 2.85
6392 7468 6.015856 TGTTTCTCAAAGACACAAACAGGAAA 60.016 34.615 0.00 0.00 32.53 3.13
6487 7564 7.651027 ATTCCAAATACTTCTCCCATTTCTG 57.349 36.000 0.00 0.00 0.00 3.02
6803 7897 4.664267 AGCTCCCTCCCACCTGCA 62.664 66.667 0.00 0.00 0.00 4.41
6853 7947 8.893727 ACCTCTATTAAATAAGAACACATGTGC 58.106 33.333 25.68 10.49 0.00 4.57
6885 7979 0.535780 CATGCAGTGTGTGTCCAGGT 60.536 55.000 0.00 0.00 0.00 4.00
7289 8390 2.998670 CAATATCCTGTCTATGCTGGCG 59.001 50.000 0.00 0.00 0.00 5.69
7409 8512 8.581578 TGTTCTTTCCATCAATTTAGGTTTACC 58.418 33.333 0.00 0.00 0.00 2.85
7414 8517 7.185318 TCCATCAATTTAGGTTTACCGAGTA 57.815 36.000 0.00 0.00 42.08 2.59
7532 8635 6.154021 TGGGACTAAGGTGAATCTACAACTAC 59.846 42.308 0.00 0.00 36.77 2.73
7539 8642 5.067936 AGGTGAATCTACAACTACCTCATCG 59.932 44.000 0.00 0.00 35.95 3.84
7725 8832 4.514441 CAGCCTGTTCATCTATGATTGTCC 59.486 45.833 0.00 0.00 36.56 4.02
7742 8849 0.382515 TCCCTTGTTTGCGTTTTCCG 59.617 50.000 0.00 0.00 40.40 4.30
7753 8860 0.042188 CGTTTTCCGCTGTGTCAGTG 60.042 55.000 3.68 3.68 41.13 3.66
7800 8907 1.455773 GGGGGCATGTTAAGGAGGC 60.456 63.158 0.00 0.00 0.00 4.70
7841 8948 5.181748 AGGTGTTTGTTCTGAGCATATCTC 58.818 41.667 0.00 0.00 42.23 2.75
7842 8949 5.046014 AGGTGTTTGTTCTGAGCATATCTCT 60.046 40.000 0.00 0.00 42.38 3.10
7959 9069 3.670055 CCAAGTGTCGTTTGATTGATTGC 59.330 43.478 0.00 0.00 0.00 3.56
8492 9828 4.043596 AGGAGAGCCTCATGGACTAAATT 58.956 43.478 0.00 0.00 42.19 1.82
8857 10200 0.994247 TCCTGACCAATGCCAGTGAT 59.006 50.000 0.00 0.00 0.00 3.06
8935 10278 7.602265 GCTTGCATAAAATTTCCTTGGAAGTTA 59.398 33.333 20.17 7.37 37.84 2.24
8936 10279 9.657419 CTTGCATAAAATTTCCTTGGAAGTTAT 57.343 29.630 9.94 8.92 32.94 1.89
8937 10280 9.434420 TTGCATAAAATTTCCTTGGAAGTTATG 57.566 29.630 22.09 22.09 0.00 1.90
8938 10281 8.811017 TGCATAAAATTTCCTTGGAAGTTATGA 58.189 29.630 25.96 17.02 0.00 2.15
8943 10286 9.710900 AAAATTTCCTTGGAAGTTATGAATGAC 57.289 29.630 9.94 0.00 0.00 3.06
8944 10287 8.655935 AATTTCCTTGGAAGTTATGAATGACT 57.344 30.769 8.14 0.00 0.00 3.41
8945 10288 8.655935 ATTTCCTTGGAAGTTATGAATGACTT 57.344 30.769 2.16 0.47 39.03 3.01
8946 10289 8.477419 TTTCCTTGGAAGTTATGAATGACTTT 57.523 30.769 2.16 0.00 36.84 2.66
8947 10290 7.687941 TCCTTGGAAGTTATGAATGACTTTC 57.312 36.000 2.42 1.37 36.84 2.62
8948 10291 7.461749 TCCTTGGAAGTTATGAATGACTTTCT 58.538 34.615 7.53 0.00 36.84 2.52
8949 10292 7.391554 TCCTTGGAAGTTATGAATGACTTTCTG 59.608 37.037 7.53 2.20 36.84 3.02
8950 10293 7.391554 CCTTGGAAGTTATGAATGACTTTCTGA 59.608 37.037 7.53 0.00 36.84 3.27
8951 10294 8.690203 TTGGAAGTTATGAATGACTTTCTGAA 57.310 30.769 7.53 0.00 36.84 3.02
8952 10295 8.690203 TGGAAGTTATGAATGACTTTCTGAAA 57.310 30.769 2.44 2.44 36.84 2.69
8953 10296 8.786898 TGGAAGTTATGAATGACTTTCTGAAAG 58.213 33.333 24.58 24.58 44.10 2.62
8981 10324 8.507524 ACTAAAAACAGTTTATGAGGATAGGC 57.492 34.615 0.00 0.00 0.00 3.93
8982 10325 8.107095 ACTAAAAACAGTTTATGAGGATAGGCA 58.893 33.333 0.00 0.00 0.00 4.75
8983 10326 7.396540 AAAAACAGTTTATGAGGATAGGCAG 57.603 36.000 0.00 0.00 0.00 4.85
8984 10327 4.078639 ACAGTTTATGAGGATAGGCAGC 57.921 45.455 0.00 0.00 0.00 5.25
8985 10328 3.062763 CAGTTTATGAGGATAGGCAGCG 58.937 50.000 0.00 0.00 0.00 5.18
8986 10329 2.965831 AGTTTATGAGGATAGGCAGCGA 59.034 45.455 0.00 0.00 0.00 4.93
8987 10330 3.388024 AGTTTATGAGGATAGGCAGCGAA 59.612 43.478 0.00 0.00 0.00 4.70
8988 10331 4.040952 AGTTTATGAGGATAGGCAGCGAAT 59.959 41.667 0.00 0.00 0.00 3.34
8989 10332 5.246203 AGTTTATGAGGATAGGCAGCGAATA 59.754 40.000 0.00 0.00 0.00 1.75
8990 10333 3.883830 ATGAGGATAGGCAGCGAATAG 57.116 47.619 0.00 0.00 0.00 1.73
8991 10334 1.895798 TGAGGATAGGCAGCGAATAGG 59.104 52.381 0.00 0.00 0.00 2.57
8992 10335 0.610687 AGGATAGGCAGCGAATAGGC 59.389 55.000 0.00 0.00 0.00 3.93
8996 10339 4.242602 GGCAGCGAATAGGCCTTT 57.757 55.556 12.58 0.00 44.32 3.11
8997 10340 1.729881 GGCAGCGAATAGGCCTTTG 59.270 57.895 12.58 0.00 44.32 2.77
9016 10359 1.423541 TGGCCTTGTTCTCTTGGCTTA 59.576 47.619 3.32 0.00 44.36 3.09
9017 10360 2.041620 TGGCCTTGTTCTCTTGGCTTAT 59.958 45.455 3.32 0.00 44.36 1.73
9018 10361 2.424956 GGCCTTGTTCTCTTGGCTTATG 59.575 50.000 0.00 0.00 44.36 1.90
9053 10396 3.631250 TGACCTTGTTCTCTTGGCTTTT 58.369 40.909 0.00 0.00 0.00 2.27
9102 10445 5.930837 TTGGAAAGAACCAACATTTCACT 57.069 34.783 0.00 0.00 43.79 3.41
9103 10446 5.514274 TGGAAAGAACCAACATTTCACTC 57.486 39.130 0.00 0.00 36.96 3.51
9104 10447 4.952957 TGGAAAGAACCAACATTTCACTCA 59.047 37.500 0.00 0.00 36.96 3.41
9105 10448 5.163561 TGGAAAGAACCAACATTTCACTCAC 60.164 40.000 0.00 0.00 36.96 3.51
9106 10449 5.067805 GGAAAGAACCAACATTTCACTCACT 59.932 40.000 0.00 0.00 35.18 3.41
9107 10450 5.505173 AAGAACCAACATTTCACTCACTG 57.495 39.130 0.00 0.00 0.00 3.66
9108 10451 4.526970 AGAACCAACATTTCACTCACTGT 58.473 39.130 0.00 0.00 0.00 3.55
9109 10452 5.680619 AGAACCAACATTTCACTCACTGTA 58.319 37.500 0.00 0.00 0.00 2.74
9110 10453 6.119536 AGAACCAACATTTCACTCACTGTAA 58.880 36.000 0.00 0.00 0.00 2.41
9111 10454 6.601613 AGAACCAACATTTCACTCACTGTAAA 59.398 34.615 0.00 0.00 0.00 2.01
9112 10455 6.959639 ACCAACATTTCACTCACTGTAAAT 57.040 33.333 0.00 0.00 0.00 1.40
9113 10456 6.738114 ACCAACATTTCACTCACTGTAAATG 58.262 36.000 10.06 10.06 42.37 2.32
9114 10457 6.545666 ACCAACATTTCACTCACTGTAAATGA 59.454 34.615 15.95 2.46 40.24 2.57
9116 10459 6.808008 ACATTTCACTCACTGTAAATGAGG 57.192 37.500 15.95 0.00 46.60 3.86
9117 10460 6.533730 ACATTTCACTCACTGTAAATGAGGA 58.466 36.000 15.95 0.00 46.60 3.71
9118 10461 6.998074 ACATTTCACTCACTGTAAATGAGGAA 59.002 34.615 15.95 4.88 46.60 3.36
9119 10462 6.861065 TTTCACTCACTGTAAATGAGGAAC 57.139 37.500 6.92 0.00 46.60 3.62
9120 10463 4.894784 TCACTCACTGTAAATGAGGAACC 58.105 43.478 6.92 0.00 46.60 3.62
9121 10464 4.346709 TCACTCACTGTAAATGAGGAACCA 59.653 41.667 6.92 0.00 46.60 3.67
9122 10465 5.063204 CACTCACTGTAAATGAGGAACCAA 58.937 41.667 6.92 0.00 46.60 3.67
9123 10466 5.049405 CACTCACTGTAAATGAGGAACCAAC 60.049 44.000 6.92 0.00 46.60 3.77
9124 10467 5.042463 TCACTGTAAATGAGGAACCAACA 57.958 39.130 0.00 0.00 0.00 3.33
9125 10468 5.630121 TCACTGTAAATGAGGAACCAACAT 58.370 37.500 0.00 0.00 0.00 2.71
9126 10469 6.068010 TCACTGTAAATGAGGAACCAACATT 58.932 36.000 9.20 9.20 36.07 2.71
9127 10470 6.549364 TCACTGTAAATGAGGAACCAACATTT 59.451 34.615 21.54 21.54 43.48 2.32
9128 10471 6.863126 CACTGTAAATGAGGAACCAACATTTC 59.137 38.462 21.49 16.41 41.32 2.17
9129 10472 6.549364 ACTGTAAATGAGGAACCAACATTTCA 59.451 34.615 21.49 18.44 41.32 2.69
9130 10473 6.744112 TGTAAATGAGGAACCAACATTTCAC 58.256 36.000 21.49 18.45 41.32 3.18
9131 10474 6.549364 TGTAAATGAGGAACCAACATTTCACT 59.451 34.615 21.49 9.59 41.32 3.41
9132 10475 5.712152 AATGAGGAACCAACATTTCACTC 57.288 39.130 9.20 0.00 31.46 3.51
9133 10476 3.138304 TGAGGAACCAACATTTCACTCG 58.862 45.455 0.00 0.00 0.00 4.18
9134 10477 1.880027 AGGAACCAACATTTCACTCGC 59.120 47.619 0.00 0.00 0.00 5.03
9135 10478 1.880027 GGAACCAACATTTCACTCGCT 59.120 47.619 0.00 0.00 0.00 4.93
9136 10479 2.350772 GGAACCAACATTTCACTCGCTG 60.351 50.000 0.00 0.00 0.00 5.18
9137 10480 1.967319 ACCAACATTTCACTCGCTGT 58.033 45.000 0.00 0.00 0.00 4.40
9138 10481 3.120321 ACCAACATTTCACTCGCTGTA 57.880 42.857 0.00 0.00 0.00 2.74
9139 10482 3.472652 ACCAACATTTCACTCGCTGTAA 58.527 40.909 0.00 0.00 0.00 2.41
9140 10483 3.880490 ACCAACATTTCACTCGCTGTAAA 59.120 39.130 0.00 0.00 0.00 2.01
9141 10484 4.518970 ACCAACATTTCACTCGCTGTAAAT 59.481 37.500 0.00 0.00 0.00 1.40
9142 10485 4.853196 CCAACATTTCACTCGCTGTAAATG 59.147 41.667 0.00 0.00 42.37 2.32
9143 10486 5.334802 CCAACATTTCACTCGCTGTAAATGA 60.335 40.000 12.20 0.00 40.24 2.57
9144 10487 5.536554 ACATTTCACTCGCTGTAAATGAG 57.463 39.130 12.20 5.40 40.24 2.90
9145 10488 4.393062 ACATTTCACTCGCTGTAAATGAGG 59.607 41.667 12.20 0.00 40.24 3.86
9146 10489 3.953712 TTCACTCGCTGTAAATGAGGA 57.046 42.857 0.00 0.00 34.03 3.71
9147 10490 3.953712 TCACTCGCTGTAAATGAGGAA 57.046 42.857 0.00 0.00 34.03 3.36
9148 10491 4.471904 TCACTCGCTGTAAATGAGGAAT 57.528 40.909 0.00 0.00 34.03 3.01
9149 10492 4.832248 TCACTCGCTGTAAATGAGGAATT 58.168 39.130 0.00 0.00 34.03 2.17
9150 10493 5.972935 TCACTCGCTGTAAATGAGGAATTA 58.027 37.500 0.00 0.00 34.03 1.40
9151 10494 6.403049 TCACTCGCTGTAAATGAGGAATTAA 58.597 36.000 0.00 0.00 34.03 1.40
9170 10556 8.699749 GGAATTAACATTTCACTTGCTGTAAAC 58.300 33.333 0.00 0.00 0.00 2.01
9175 10561 5.470098 ACATTTCACTTGCTGTAAACGAGAT 59.530 36.000 0.00 0.00 0.00 2.75
9186 10572 6.966632 TGCTGTAAACGAGATGCAATATTTTC 59.033 34.615 0.00 0.00 0.00 2.29
9192 10578 6.841443 ACGAGATGCAATATTTTCTGAGAG 57.159 37.500 0.00 0.00 0.00 3.20
9193 10579 6.577103 ACGAGATGCAATATTTTCTGAGAGA 58.423 36.000 0.00 0.00 0.00 3.10
9479 10867 9.398170 CCAAACACATCTTACATAAAGTTCAAG 57.602 33.333 0.00 0.00 36.51 3.02
9635 11023 3.517602 GTGTGTTTGGGACTTGGAAAAC 58.482 45.455 0.00 0.00 33.98 2.43
9636 11024 2.498078 TGTGTTTGGGACTTGGAAAACC 59.502 45.455 0.00 0.00 32.72 3.27
9867 11292 0.689055 AGAACCCTTACCCGTTCACC 59.311 55.000 0.00 0.00 40.69 4.02
9868 11293 0.671472 GAACCCTTACCCGTTCACCG 60.671 60.000 0.00 0.00 38.58 4.94
9912 11340 5.098663 AGAGAACCCTTACCCATTCACTAA 58.901 41.667 0.00 0.00 0.00 2.24
9929 11357 8.906867 CATTCACTAATTTGGTTCTACATCCAT 58.093 33.333 0.00 0.00 33.50 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.547859 CCCAGATAGGCTGTGTGC 57.452 61.111 2.68 0.00 43.33 4.57
17 18 4.609018 CGTGCCGGCCCAGATAGG 62.609 72.222 26.77 5.64 37.03 2.57
47 48 3.964875 CATAACGGGCCGGCATGC 61.965 66.667 31.78 9.90 0.00 4.06
48 49 3.286751 CCATAACGGGCCGGCATG 61.287 66.667 31.78 28.37 0.00 4.06
56 57 3.202001 CCAGCGTGCCATAACGGG 61.202 66.667 0.00 0.00 43.75 5.28
57 58 3.202001 CCCAGCGTGCCATAACGG 61.202 66.667 0.00 0.00 43.75 4.44
58 59 2.435938 ACCCAGCGTGCCATAACG 60.436 61.111 0.00 0.00 46.30 3.18
59 60 2.461110 CGACCCAGCGTGCCATAAC 61.461 63.158 0.00 0.00 0.00 1.89
60 61 2.125310 CGACCCAGCGTGCCATAA 60.125 61.111 0.00 0.00 0.00 1.90
61 62 4.830765 GCGACCCAGCGTGCCATA 62.831 66.667 0.00 0.00 0.00 2.74
74 75 2.104281 AGGTAAATATGGGTCAGGCGAC 59.896 50.000 0.00 0.00 41.80 5.19
75 76 2.367567 GAGGTAAATATGGGTCAGGCGA 59.632 50.000 0.00 0.00 0.00 5.54
76 77 2.767505 GAGGTAAATATGGGTCAGGCG 58.232 52.381 0.00 0.00 0.00 5.52
77 78 2.550208 CCGAGGTAAATATGGGTCAGGC 60.550 54.545 0.00 0.00 0.00 4.85
78 79 2.550208 GCCGAGGTAAATATGGGTCAGG 60.550 54.545 0.00 0.00 0.00 3.86
79 80 2.368875 AGCCGAGGTAAATATGGGTCAG 59.631 50.000 0.00 0.00 0.00 3.51
80 81 2.104111 CAGCCGAGGTAAATATGGGTCA 59.896 50.000 0.00 0.00 0.00 4.02
81 82 2.550208 CCAGCCGAGGTAAATATGGGTC 60.550 54.545 0.00 0.00 0.00 4.46
82 83 1.420138 CCAGCCGAGGTAAATATGGGT 59.580 52.381 0.00 0.00 0.00 4.51
83 84 1.882352 GCCAGCCGAGGTAAATATGGG 60.882 57.143 0.00 0.00 0.00 4.00
84 85 1.523758 GCCAGCCGAGGTAAATATGG 58.476 55.000 0.00 0.00 0.00 2.74
85 86 1.148310 CGCCAGCCGAGGTAAATATG 58.852 55.000 0.00 0.00 40.02 1.78
86 87 0.602905 GCGCCAGCCGAGGTAAATAT 60.603 55.000 0.00 0.00 40.02 1.28
87 88 1.227438 GCGCCAGCCGAGGTAAATA 60.227 57.895 0.00 0.00 40.02 1.40
88 89 2.513897 GCGCCAGCCGAGGTAAAT 60.514 61.111 0.00 0.00 40.02 1.40
94 95 4.445545 GAAAACGCGCCAGCCGAG 62.446 66.667 5.73 0.00 42.75 4.63
101 102 4.717313 AGAGGGGGAAAACGCGCC 62.717 66.667 5.73 0.00 39.94 6.53
102 103 2.791501 TACAGAGGGGGAAAACGCGC 62.792 60.000 5.73 0.00 0.00 6.86
103 104 1.017701 GTACAGAGGGGGAAAACGCG 61.018 60.000 3.53 3.53 0.00 6.01
104 105 0.035739 TGTACAGAGGGGGAAAACGC 59.964 55.000 0.00 0.00 0.00 4.84
105 106 1.944430 GCTGTACAGAGGGGGAAAACG 60.944 57.143 27.08 0.00 0.00 3.60
106 107 1.822506 GCTGTACAGAGGGGGAAAAC 58.177 55.000 27.08 0.46 0.00 2.43
107 108 0.323629 CGCTGTACAGAGGGGGAAAA 59.676 55.000 27.08 0.00 0.00 2.29
108 109 0.543410 TCGCTGTACAGAGGGGGAAA 60.543 55.000 27.08 3.12 0.00 3.13
109 110 0.543410 TTCGCTGTACAGAGGGGGAA 60.543 55.000 27.08 16.23 0.00 3.97
110 111 0.543410 TTTCGCTGTACAGAGGGGGA 60.543 55.000 27.08 11.05 0.00 4.81
111 112 0.323629 TTTTCGCTGTACAGAGGGGG 59.676 55.000 27.08 8.75 0.00 5.40
112 113 2.178912 TTTTTCGCTGTACAGAGGGG 57.821 50.000 27.08 11.57 0.00 4.79
169 170 9.706691 CGCTAATAAAACTCTAGATTTATCCCA 57.293 33.333 10.40 2.02 33.66 4.37
170 171 8.657729 GCGCTAATAAAACTCTAGATTTATCCC 58.342 37.037 0.00 3.98 33.66 3.85
171 172 9.425577 AGCGCTAATAAAACTCTAGATTTATCC 57.574 33.333 8.99 4.23 33.66 2.59
174 175 8.548721 GCAAGCGCTAATAAAACTCTAGATTTA 58.451 33.333 12.05 0.00 34.30 1.40
175 176 7.410485 GCAAGCGCTAATAAAACTCTAGATTT 58.590 34.615 12.05 0.00 34.30 2.17
176 177 6.017852 GGCAAGCGCTAATAAAACTCTAGATT 60.018 38.462 12.05 0.00 38.60 2.40
177 178 5.467063 GGCAAGCGCTAATAAAACTCTAGAT 59.533 40.000 12.05 0.00 38.60 1.98
178 179 4.809426 GGCAAGCGCTAATAAAACTCTAGA 59.191 41.667 12.05 0.00 38.60 2.43
179 180 4.811557 AGGCAAGCGCTAATAAAACTCTAG 59.188 41.667 12.05 0.00 38.60 2.43
180 181 4.766375 AGGCAAGCGCTAATAAAACTCTA 58.234 39.130 12.05 0.00 38.60 2.43
181 182 3.610911 AGGCAAGCGCTAATAAAACTCT 58.389 40.909 12.05 0.00 38.60 3.24
182 183 3.374058 TGAGGCAAGCGCTAATAAAACTC 59.626 43.478 12.05 12.24 38.60 3.01
183 184 3.343617 TGAGGCAAGCGCTAATAAAACT 58.656 40.909 12.05 1.99 38.60 2.66
184 185 3.757745 TGAGGCAAGCGCTAATAAAAC 57.242 42.857 12.05 0.00 38.60 2.43
185 186 4.981806 AATGAGGCAAGCGCTAATAAAA 57.018 36.364 12.05 0.00 38.60 1.52
186 187 6.443934 TTTAATGAGGCAAGCGCTAATAAA 57.556 33.333 12.05 0.62 38.60 1.40
187 188 6.443934 TTTTAATGAGGCAAGCGCTAATAA 57.556 33.333 12.05 0.00 38.60 1.40
188 189 6.486657 AGATTTTAATGAGGCAAGCGCTAATA 59.513 34.615 12.05 0.00 38.60 0.98
189 190 4.981806 TTTTAATGAGGCAAGCGCTAAT 57.018 36.364 12.05 0.00 38.60 1.73
190 191 4.640201 AGATTTTAATGAGGCAAGCGCTAA 59.360 37.500 12.05 0.00 38.60 3.09
191 192 4.199310 AGATTTTAATGAGGCAAGCGCTA 58.801 39.130 12.05 0.00 38.60 4.26
192 193 3.019564 AGATTTTAATGAGGCAAGCGCT 58.980 40.909 2.64 2.64 38.60 5.92
193 194 3.427161 AGATTTTAATGAGGCAAGCGC 57.573 42.857 0.00 0.00 37.44 5.92
194 195 4.142403 TGGAAGATTTTAATGAGGCAAGCG 60.142 41.667 0.00 0.00 0.00 4.68
195 196 5.329035 TGGAAGATTTTAATGAGGCAAGC 57.671 39.130 0.00 0.00 0.00 4.01
196 197 6.462067 GGGATGGAAGATTTTAATGAGGCAAG 60.462 42.308 0.00 0.00 0.00 4.01
197 198 5.363580 GGGATGGAAGATTTTAATGAGGCAA 59.636 40.000 0.00 0.00 0.00 4.52
198 199 4.895297 GGGATGGAAGATTTTAATGAGGCA 59.105 41.667 0.00 0.00 0.00 4.75
199 200 4.895297 TGGGATGGAAGATTTTAATGAGGC 59.105 41.667 0.00 0.00 0.00 4.70
200 201 7.342799 TCTTTGGGATGGAAGATTTTAATGAGG 59.657 37.037 0.00 0.00 0.00 3.86
201 202 8.297470 TCTTTGGGATGGAAGATTTTAATGAG 57.703 34.615 0.00 0.00 0.00 2.90
202 203 8.663209 TTCTTTGGGATGGAAGATTTTAATGA 57.337 30.769 0.00 0.00 32.40 2.57
203 204 8.534496 ACTTCTTTGGGATGGAAGATTTTAATG 58.466 33.333 8.60 0.00 39.52 1.90
204 205 8.670521 ACTTCTTTGGGATGGAAGATTTTAAT 57.329 30.769 8.60 0.00 39.52 1.40
205 206 9.594936 TTACTTCTTTGGGATGGAAGATTTTAA 57.405 29.630 8.60 0.00 39.52 1.52
206 207 9.594936 TTTACTTCTTTGGGATGGAAGATTTTA 57.405 29.630 8.60 0.00 39.52 1.52
207 208 8.491045 TTTACTTCTTTGGGATGGAAGATTTT 57.509 30.769 8.60 0.00 39.52 1.82
208 209 8.491045 TTTTACTTCTTTGGGATGGAAGATTT 57.509 30.769 8.60 0.00 39.52 2.17
209 210 7.950124 TCTTTTACTTCTTTGGGATGGAAGATT 59.050 33.333 8.60 0.00 39.52 2.40
210 211 7.470192 TCTTTTACTTCTTTGGGATGGAAGAT 58.530 34.615 8.60 0.00 39.52 2.40
211 212 6.848069 TCTTTTACTTCTTTGGGATGGAAGA 58.152 36.000 8.60 0.00 39.52 2.87
212 213 6.717084 ACTCTTTTACTTCTTTGGGATGGAAG 59.283 38.462 0.00 0.00 41.30 3.46
213 214 6.610830 ACTCTTTTACTTCTTTGGGATGGAA 58.389 36.000 0.00 0.00 0.00 3.53
214 215 6.200878 ACTCTTTTACTTCTTTGGGATGGA 57.799 37.500 0.00 0.00 0.00 3.41
215 216 6.940298 TGTACTCTTTTACTTCTTTGGGATGG 59.060 38.462 0.00 0.00 0.00 3.51
216 217 7.979444 TGTACTCTTTTACTTCTTTGGGATG 57.021 36.000 0.00 0.00 0.00 3.51
217 218 8.847196 GTTTGTACTCTTTTACTTCTTTGGGAT 58.153 33.333 0.00 0.00 0.00 3.85
218 219 8.050930 AGTTTGTACTCTTTTACTTCTTTGGGA 58.949 33.333 0.00 0.00 0.00 4.37
219 220 8.221965 AGTTTGTACTCTTTTACTTCTTTGGG 57.778 34.615 0.00 0.00 0.00 4.12
223 224 9.780186 AGCATAGTTTGTACTCTTTTACTTCTT 57.220 29.630 0.00 0.00 35.78 2.52
224 225 9.425577 GAGCATAGTTTGTACTCTTTTACTTCT 57.574 33.333 0.00 0.00 35.78 2.85
225 226 9.425577 AGAGCATAGTTTGTACTCTTTTACTTC 57.574 33.333 0.00 0.00 34.06 3.01
276 277 9.355215 GCGTACATTTGTAGTGCTCTAATATAT 57.645 33.333 0.00 0.00 33.08 0.86
277 278 8.354426 TGCGTACATTTGTAGTGCTCTAATATA 58.646 33.333 13.09 0.00 35.39 0.86
278 279 7.207383 TGCGTACATTTGTAGTGCTCTAATAT 58.793 34.615 13.09 0.00 35.39 1.28
279 280 6.566141 TGCGTACATTTGTAGTGCTCTAATA 58.434 36.000 13.09 0.00 35.39 0.98
280 281 5.416083 TGCGTACATTTGTAGTGCTCTAAT 58.584 37.500 13.09 0.00 35.39 1.73
281 282 4.811908 TGCGTACATTTGTAGTGCTCTAA 58.188 39.130 13.09 0.00 35.39 2.10
282 283 4.443913 TGCGTACATTTGTAGTGCTCTA 57.556 40.909 13.09 0.00 35.39 2.43
283 284 3.313012 TGCGTACATTTGTAGTGCTCT 57.687 42.857 13.09 0.00 35.39 4.09
284 285 3.370978 ACATGCGTACATTTGTAGTGCTC 59.629 43.478 13.09 0.00 35.39 4.26
285 286 3.334691 ACATGCGTACATTTGTAGTGCT 58.665 40.909 13.09 0.00 35.39 4.40
286 287 3.740044 ACATGCGTACATTTGTAGTGC 57.260 42.857 0.00 7.56 32.87 4.40
298 299 9.976255 GTTCAATAATTTTGTAGTACATGCGTA 57.024 29.630 3.28 0.00 0.00 4.42
299 300 8.508062 TGTTCAATAATTTTGTAGTACATGCGT 58.492 29.630 3.28 0.00 0.00 5.24
300 301 8.888332 TGTTCAATAATTTTGTAGTACATGCG 57.112 30.769 3.28 0.00 0.00 4.73
375 376 1.536496 GCACGGCCCGTTTAACTTTTT 60.536 47.619 5.76 0.00 38.32 1.94
376 377 0.031043 GCACGGCCCGTTTAACTTTT 59.969 50.000 5.76 0.00 38.32 2.27
377 378 1.655885 GCACGGCCCGTTTAACTTT 59.344 52.632 5.76 0.00 38.32 2.66
378 379 2.263021 GGCACGGCCCGTTTAACTT 61.263 57.895 5.76 0.00 44.06 2.66
379 380 2.670592 GGCACGGCCCGTTTAACT 60.671 61.111 5.76 0.00 44.06 2.24
407 408 4.729918 CCTGGAGGCTGGGCACAC 62.730 72.222 0.00 0.00 0.00 3.82
417 418 2.300967 TGCTAACTGGGCCTGGAGG 61.301 63.158 15.36 5.09 38.53 4.30
418 419 1.078143 GTGCTAACTGGGCCTGGAG 60.078 63.158 15.36 11.99 0.00 3.86
419 420 2.954684 CGTGCTAACTGGGCCTGGA 61.955 63.158 15.36 1.38 0.00 3.86
420 421 2.436646 CGTGCTAACTGGGCCTGG 60.437 66.667 15.36 5.47 0.00 4.45
421 422 2.436646 CCGTGCTAACTGGGCCTG 60.437 66.667 9.11 9.11 0.00 4.85
422 423 4.410400 GCCGTGCTAACTGGGCCT 62.410 66.667 4.53 0.00 39.67 5.19
426 427 3.894547 AACGGGCCGTGCTAACTGG 62.895 63.158 34.87 0.00 39.99 4.00
427 428 1.964373 AAACGGGCCGTGCTAACTG 60.964 57.895 34.87 0.00 39.99 3.16
428 429 1.964373 CAAACGGGCCGTGCTAACT 60.964 57.895 34.87 13.44 39.99 2.24
429 430 2.559330 CAAACGGGCCGTGCTAAC 59.441 61.111 34.87 0.00 39.99 2.34
430 431 2.670251 CCAAACGGGCCGTGCTAA 60.670 61.111 34.87 0.00 39.99 3.09
439 440 0.818040 GGTATAGCTGGCCAAACGGG 60.818 60.000 7.01 0.00 40.85 5.28
440 441 0.180406 AGGTATAGCTGGCCAAACGG 59.820 55.000 7.01 0.00 0.00 4.44
441 442 1.583054 GAGGTATAGCTGGCCAAACG 58.417 55.000 9.66 0.00 0.00 3.60
442 443 1.583054 CGAGGTATAGCTGGCCAAAC 58.417 55.000 9.66 1.16 0.00 2.93
443 444 0.179056 GCGAGGTATAGCTGGCCAAA 60.179 55.000 23.64 0.00 0.00 3.28
444 445 1.048724 AGCGAGGTATAGCTGGCCAA 61.049 55.000 28.34 0.00 42.82 4.52
445 446 1.457643 AGCGAGGTATAGCTGGCCA 60.458 57.895 28.34 4.71 42.82 5.36
446 447 1.290639 GAGCGAGGTATAGCTGGCC 59.709 63.158 28.34 18.76 44.69 5.36
447 448 1.290639 GGAGCGAGGTATAGCTGGC 59.709 63.158 25.86 25.86 44.69 4.85
448 449 1.203523 GATGGAGCGAGGTATAGCTGG 59.796 57.143 9.66 9.49 44.69 4.85
449 450 2.163412 GAGATGGAGCGAGGTATAGCTG 59.837 54.545 9.66 3.30 44.69 4.24
451 452 1.474879 GGAGATGGAGCGAGGTATAGC 59.525 57.143 0.00 0.00 0.00 2.97
452 453 2.752354 CAGGAGATGGAGCGAGGTATAG 59.248 54.545 0.00 0.00 0.00 1.31
453 454 2.796557 CAGGAGATGGAGCGAGGTATA 58.203 52.381 0.00 0.00 0.00 1.47
454 455 1.626686 CAGGAGATGGAGCGAGGTAT 58.373 55.000 0.00 0.00 0.00 2.73
455 456 1.109920 GCAGGAGATGGAGCGAGGTA 61.110 60.000 0.00 0.00 0.00 3.08
456 457 2.430610 GCAGGAGATGGAGCGAGGT 61.431 63.158 0.00 0.00 0.00 3.85
460 461 1.521010 CTGTGCAGGAGATGGAGCG 60.521 63.158 0.00 0.00 0.00 5.03
478 479 1.535202 ATCGAGGGAGAGGGATGGC 60.535 63.158 0.00 0.00 0.00 4.40
481 482 0.789687 ATGGATCGAGGGAGAGGGAT 59.210 55.000 0.00 0.00 0.00 3.85
512 513 0.868406 AGCGCAAGAGAGAAAAACGG 59.132 50.000 11.47 0.00 43.02 4.44
548 549 0.547712 TCCAAGGAAGAGGGGTCTGG 60.548 60.000 0.00 0.00 0.00 3.86
552 553 1.589414 CAGATCCAAGGAAGAGGGGT 58.411 55.000 0.00 0.00 0.00 4.95
555 556 0.539051 ACGCAGATCCAAGGAAGAGG 59.461 55.000 0.00 0.00 0.00 3.69
570 571 1.517694 GGAATAAGCCGTCGACGCA 60.518 57.895 31.73 16.22 38.18 5.24
611 612 1.945394 CCTTGTATCCTGCAGATGCAC 59.055 52.381 17.39 7.96 45.90 4.57
613 614 1.602311 CCCTTGTATCCTGCAGATGC 58.398 55.000 17.39 10.88 38.04 3.91
614 615 1.770658 TCCCCTTGTATCCTGCAGATG 59.229 52.381 17.39 0.00 36.33 2.90
615 616 2.196742 TCCCCTTGTATCCTGCAGAT 57.803 50.000 17.39 9.50 39.15 2.90
616 617 1.839994 CTTCCCCTTGTATCCTGCAGA 59.160 52.381 17.39 1.21 0.00 4.26
685 686 2.624838 GGACCATGTTGGATATTGCCTG 59.375 50.000 0.00 0.00 40.96 4.85
696 697 5.614324 TCCTAACTATGAGGACCATGTTG 57.386 43.478 0.00 0.00 38.22 3.33
739 740 2.930040 GCCGCTGTATTCGCATATGTAT 59.070 45.455 4.29 0.00 0.00 2.29
743 744 3.526931 ATAGCCGCTGTATTCGCATAT 57.473 42.857 2.16 0.00 0.00 1.78
744 745 3.729762 CGTATAGCCGCTGTATTCGCATA 60.730 47.826 2.16 0.00 0.00 3.14
759 760 1.068741 CACCCTCAAGGACCGTATAGC 59.931 57.143 0.00 0.00 39.89 2.97
777 778 0.250166 AGCCAGGACCGTTGTTACAC 60.250 55.000 0.00 0.00 0.00 2.90
780 781 2.099592 CGTATAGCCAGGACCGTTGTTA 59.900 50.000 0.00 0.00 0.00 2.41
851 852 2.199652 TGGCGGAAGGGTTTGCTTG 61.200 57.895 0.00 0.00 0.00 4.01
870 871 4.675029 ACCGTTCCGCTTCCCACG 62.675 66.667 0.00 0.00 0.00 4.94
927 928 1.356059 GCCTTCCTTCCTTCCTTCCTT 59.644 52.381 0.00 0.00 0.00 3.36
928 929 0.995803 GCCTTCCTTCCTTCCTTCCT 59.004 55.000 0.00 0.00 0.00 3.36
930 931 0.393132 CCGCCTTCCTTCCTTCCTTC 60.393 60.000 0.00 0.00 0.00 3.46
932 933 2.301738 CCCGCCTTCCTTCCTTCCT 61.302 63.158 0.00 0.00 0.00 3.36
933 934 2.272471 CCCGCCTTCCTTCCTTCC 59.728 66.667 0.00 0.00 0.00 3.46
934 935 2.438614 GCCCGCCTTCCTTCCTTC 60.439 66.667 0.00 0.00 0.00 3.46
1052 1075 1.436179 CGAGATAGGGGAGGGGAGGA 61.436 65.000 0.00 0.00 0.00 3.71
1064 1087 1.154376 GCTAGGTCGCGCGAGATAG 60.154 63.158 35.75 33.22 0.00 2.08
1122 1160 2.040359 GAGAAGGGGAGGGGAGGG 60.040 72.222 0.00 0.00 0.00 4.30
1123 1161 2.444895 CGAGAAGGGGAGGGGAGG 60.445 72.222 0.00 0.00 0.00 4.30
1124 1162 1.758906 GACGAGAAGGGGAGGGGAG 60.759 68.421 0.00 0.00 0.00 4.30
1125 1163 2.363361 GACGAGAAGGGGAGGGGA 59.637 66.667 0.00 0.00 0.00 4.81
1126 1164 3.148279 CGACGAGAAGGGGAGGGG 61.148 72.222 0.00 0.00 0.00 4.79
1158 1196 1.770294 GGAATCGTGAGGAGAGGAGT 58.230 55.000 0.00 0.00 0.00 3.85
1253 1294 2.960659 CAGCTCAGATCCAGCGCG 60.961 66.667 0.00 0.00 42.14 6.86
1371 1422 0.455815 CCCGCCAACCAAATTCTAGC 59.544 55.000 0.00 0.00 0.00 3.42
1372 1423 1.743394 GACCCGCCAACCAAATTCTAG 59.257 52.381 0.00 0.00 0.00 2.43
1374 1425 0.112412 AGACCCGCCAACCAAATTCT 59.888 50.000 0.00 0.00 0.00 2.40
1595 1669 2.159462 GGAGCAGAAGCATTTTTCGAGG 60.159 50.000 0.00 0.00 45.49 4.63
1606 1680 0.737715 AATGACGTCGGAGCAGAAGC 60.738 55.000 11.62 0.00 42.56 3.86
1621 1695 1.410850 GGGGGCGATCCAGAGAATGA 61.411 60.000 0.00 0.00 37.22 2.57
1622 1696 1.072159 GGGGGCGATCCAGAGAATG 59.928 63.158 0.00 0.00 37.22 2.67
1623 1697 0.191064 TAGGGGGCGATCCAGAGAAT 59.809 55.000 0.00 0.00 37.22 2.40
1624 1698 0.470080 CTAGGGGGCGATCCAGAGAA 60.470 60.000 0.00 0.00 37.22 2.87
1625 1699 1.153989 CTAGGGGGCGATCCAGAGA 59.846 63.158 0.00 0.00 37.22 3.10
1626 1700 0.760945 AACTAGGGGGCGATCCAGAG 60.761 60.000 0.00 0.00 37.22 3.35
1627 1701 1.048724 CAACTAGGGGGCGATCCAGA 61.049 60.000 0.00 0.00 37.22 3.86
1628 1702 1.338136 ACAACTAGGGGGCGATCCAG 61.338 60.000 0.00 0.00 37.22 3.86
1629 1703 1.306654 ACAACTAGGGGGCGATCCA 60.307 57.895 0.00 0.00 37.22 3.41
1630 1704 1.335132 TGACAACTAGGGGGCGATCC 61.335 60.000 0.00 0.00 0.00 3.36
1631 1705 0.539986 TTGACAACTAGGGGGCGATC 59.460 55.000 0.00 0.00 0.00 3.69
1632 1706 0.988832 TTTGACAACTAGGGGGCGAT 59.011 50.000 0.00 0.00 0.00 4.58
1683 1757 9.712305 ATGGCATGAAGTAGTAATGTAGTATTC 57.288 33.333 0.00 0.00 0.00 1.75
1688 1762 7.792374 ACAATGGCATGAAGTAGTAATGTAG 57.208 36.000 0.00 0.00 0.00 2.74
1727 1803 7.334421 TGATTTTGGCTAACTTGTCTAGCTAAG 59.666 37.037 0.00 0.00 41.85 2.18
1846 1929 9.599322 GAGAGTTGTACATACAATCAAAAGTTG 57.401 33.333 7.69 0.00 46.56 3.16
1892 1975 4.820284 TCATACGTCAAACATTGCACAA 57.180 36.364 0.00 0.00 0.00 3.33
1911 1994 6.672266 ACTCAGTAAACTCTCCTCATTTCA 57.328 37.500 0.00 0.00 0.00 2.69
1926 2009 7.276658 TGTGAAGGTACAATCAAACTCAGTAA 58.723 34.615 0.00 0.00 0.00 2.24
1993 2076 8.204160 GCCAGAAGCAATAACCCTTTTATTATT 58.796 33.333 0.00 0.00 42.97 1.40
1994 2077 7.470009 CGCCAGAAGCAATAACCCTTTTATTAT 60.470 37.037 0.00 0.00 44.04 1.28
1995 2078 6.183360 CGCCAGAAGCAATAACCCTTTTATTA 60.183 38.462 0.00 0.00 44.04 0.98
1996 2079 5.394115 CGCCAGAAGCAATAACCCTTTTATT 60.394 40.000 0.00 0.00 44.04 1.40
1997 2080 4.097892 CGCCAGAAGCAATAACCCTTTTAT 59.902 41.667 0.00 0.00 44.04 1.40
1998 2081 3.442273 CGCCAGAAGCAATAACCCTTTTA 59.558 43.478 0.00 0.00 44.04 1.52
1999 2082 2.231235 CGCCAGAAGCAATAACCCTTTT 59.769 45.455 0.00 0.00 44.04 2.27
2000 2083 1.818674 CGCCAGAAGCAATAACCCTTT 59.181 47.619 0.00 0.00 44.04 3.11
2001 2084 1.463674 CGCCAGAAGCAATAACCCTT 58.536 50.000 0.00 0.00 44.04 3.95
2002 2085 0.394352 CCGCCAGAAGCAATAACCCT 60.394 55.000 0.00 0.00 44.04 4.34
2003 2086 0.679960 ACCGCCAGAAGCAATAACCC 60.680 55.000 0.00 0.00 44.04 4.11
2004 2087 1.669265 GTACCGCCAGAAGCAATAACC 59.331 52.381 0.00 0.00 44.04 2.85
2005 2088 2.352388 TGTACCGCCAGAAGCAATAAC 58.648 47.619 0.00 0.00 44.04 1.89
2006 2089 2.772077 TGTACCGCCAGAAGCAATAA 57.228 45.000 0.00 0.00 44.04 1.40
2007 2090 2.169561 TGATGTACCGCCAGAAGCAATA 59.830 45.455 0.00 0.00 44.04 1.90
2008 2091 1.065491 TGATGTACCGCCAGAAGCAAT 60.065 47.619 0.00 0.00 44.04 3.56
2009 2092 0.323302 TGATGTACCGCCAGAAGCAA 59.677 50.000 0.00 0.00 44.04 3.91
2010 2093 0.391130 GTGATGTACCGCCAGAAGCA 60.391 55.000 0.00 0.00 44.04 3.91
2011 2094 0.391130 TGTGATGTACCGCCAGAAGC 60.391 55.000 0.00 0.00 38.52 3.86
2012 2095 1.204704 TCTGTGATGTACCGCCAGAAG 59.795 52.381 0.00 0.00 0.00 2.85
2013 2096 1.262417 TCTGTGATGTACCGCCAGAA 58.738 50.000 0.00 0.00 0.00 3.02
2014 2097 1.262417 TTCTGTGATGTACCGCCAGA 58.738 50.000 0.00 0.00 0.00 3.86
2015 2098 2.093306 TTTCTGTGATGTACCGCCAG 57.907 50.000 0.00 0.00 0.00 4.85
2016 2099 2.779755 ATTTCTGTGATGTACCGCCA 57.220 45.000 0.00 0.00 0.00 5.69
2017 2100 3.311596 GGTTATTTCTGTGATGTACCGCC 59.688 47.826 0.00 0.00 0.00 6.13
2018 2101 3.311596 GGGTTATTTCTGTGATGTACCGC 59.688 47.826 0.00 0.00 0.00 5.68
2019 2102 3.875134 GGGGTTATTTCTGTGATGTACCG 59.125 47.826 0.00 0.00 0.00 4.02
2020 2103 5.112129 AGGGGTTATTTCTGTGATGTACC 57.888 43.478 0.00 0.00 0.00 3.34
2021 2104 7.827729 AGTTTAGGGGTTATTTCTGTGATGTAC 59.172 37.037 0.00 0.00 0.00 2.90
2022 2105 7.924541 AGTTTAGGGGTTATTTCTGTGATGTA 58.075 34.615 0.00 0.00 0.00 2.29
2023 2106 6.790319 AGTTTAGGGGTTATTTCTGTGATGT 58.210 36.000 0.00 0.00 0.00 3.06
2024 2107 8.840321 CATAGTTTAGGGGTTATTTCTGTGATG 58.160 37.037 0.00 0.00 0.00 3.07
2025 2108 7.502561 GCATAGTTTAGGGGTTATTTCTGTGAT 59.497 37.037 0.00 0.00 0.00 3.06
2026 2109 6.826741 GCATAGTTTAGGGGTTATTTCTGTGA 59.173 38.462 0.00 0.00 0.00 3.58
2027 2110 6.039382 GGCATAGTTTAGGGGTTATTTCTGTG 59.961 42.308 0.00 0.00 0.00 3.66
2028 2111 6.127101 GGCATAGTTTAGGGGTTATTTCTGT 58.873 40.000 0.00 0.00 0.00 3.41
2029 2112 6.039382 GTGGCATAGTTTAGGGGTTATTTCTG 59.961 42.308 0.00 0.00 0.00 3.02
2030 2113 6.127101 GTGGCATAGTTTAGGGGTTATTTCT 58.873 40.000 0.00 0.00 0.00 2.52
2031 2114 5.301045 GGTGGCATAGTTTAGGGGTTATTTC 59.699 44.000 0.00 0.00 0.00 2.17
2032 2115 5.205821 GGTGGCATAGTTTAGGGGTTATTT 58.794 41.667 0.00 0.00 0.00 1.40
2033 2116 4.387098 GGGTGGCATAGTTTAGGGGTTATT 60.387 45.833 0.00 0.00 0.00 1.40
2034 2117 3.139584 GGGTGGCATAGTTTAGGGGTTAT 59.860 47.826 0.00 0.00 0.00 1.89
2035 2118 2.510800 GGGTGGCATAGTTTAGGGGTTA 59.489 50.000 0.00 0.00 0.00 2.85
2036 2119 1.286849 GGGTGGCATAGTTTAGGGGTT 59.713 52.381 0.00 0.00 0.00 4.11
2037 2120 0.924090 GGGTGGCATAGTTTAGGGGT 59.076 55.000 0.00 0.00 0.00 4.95
2038 2121 0.923358 TGGGTGGCATAGTTTAGGGG 59.077 55.000 0.00 0.00 0.00 4.79
2039 2122 4.141251 ACTTATGGGTGGCATAGTTTAGGG 60.141 45.833 0.00 0.00 0.00 3.53
2040 2123 4.821805 CACTTATGGGTGGCATAGTTTAGG 59.178 45.833 0.00 0.00 33.95 2.69
2041 2124 5.680619 TCACTTATGGGTGGCATAGTTTAG 58.319 41.667 0.00 0.00 37.75 1.85
2042 2125 5.702065 TCACTTATGGGTGGCATAGTTTA 57.298 39.130 0.00 0.00 37.75 2.01
2043 2126 4.584638 TCACTTATGGGTGGCATAGTTT 57.415 40.909 0.00 0.00 37.75 2.66
2044 2127 4.227300 TCTTCACTTATGGGTGGCATAGTT 59.773 41.667 0.00 0.00 37.75 2.24
2045 2128 3.780294 TCTTCACTTATGGGTGGCATAGT 59.220 43.478 0.00 0.00 37.75 2.12
2046 2129 4.422073 TCTTCACTTATGGGTGGCATAG 57.578 45.455 0.00 0.00 37.75 2.23
2047 2130 4.853468 TTCTTCACTTATGGGTGGCATA 57.147 40.909 0.00 0.00 37.75 3.14
2048 2131 3.737559 TTCTTCACTTATGGGTGGCAT 57.262 42.857 0.00 0.00 37.75 4.40
2049 2132 3.517296 TTTCTTCACTTATGGGTGGCA 57.483 42.857 0.00 0.00 37.75 4.92
2050 2133 4.864704 TTTTTCTTCACTTATGGGTGGC 57.135 40.909 0.00 0.00 37.75 5.01
2051 2134 6.588719 TCATTTTTCTTCACTTATGGGTGG 57.411 37.500 0.00 0.00 37.75 4.61
2052 2135 7.485913 CGAATCATTTTTCTTCACTTATGGGTG 59.514 37.037 0.00 0.00 38.44 4.61
2053 2136 7.176690 ACGAATCATTTTTCTTCACTTATGGGT 59.823 33.333 0.00 0.00 0.00 4.51
2054 2137 7.538575 ACGAATCATTTTTCTTCACTTATGGG 58.461 34.615 0.00 0.00 0.00 4.00
2055 2138 8.970691 AACGAATCATTTTTCTTCACTTATGG 57.029 30.769 0.00 0.00 0.00 2.74
2080 2163 3.243434 TGGCGGCGTTTCTGAATTAAAAA 60.243 39.130 9.37 0.00 0.00 1.94
2081 2164 2.293677 TGGCGGCGTTTCTGAATTAAAA 59.706 40.909 9.37 0.00 0.00 1.52
2082 2165 1.880675 TGGCGGCGTTTCTGAATTAAA 59.119 42.857 9.37 0.00 0.00 1.52
2083 2166 1.466950 CTGGCGGCGTTTCTGAATTAA 59.533 47.619 9.37 0.00 0.00 1.40
2084 2167 1.083489 CTGGCGGCGTTTCTGAATTA 58.917 50.000 9.37 0.00 0.00 1.40
2085 2168 1.586154 CCTGGCGGCGTTTCTGAATT 61.586 55.000 9.37 0.00 0.00 2.17
2086 2169 2.040544 CCTGGCGGCGTTTCTGAAT 61.041 57.895 9.37 0.00 0.00 2.57
2087 2170 2.668212 CCTGGCGGCGTTTCTGAA 60.668 61.111 9.37 0.00 0.00 3.02
2088 2171 2.951475 AAACCTGGCGGCGTTTCTGA 62.951 55.000 9.37 0.00 0.00 3.27
2089 2172 1.231958 TAAACCTGGCGGCGTTTCTG 61.232 55.000 16.15 3.03 34.22 3.02
2090 2173 0.535553 TTAAACCTGGCGGCGTTTCT 60.536 50.000 16.15 0.00 34.22 2.52
2091 2174 0.524414 ATTAAACCTGGCGGCGTTTC 59.476 50.000 16.15 0.00 34.22 2.78
2092 2175 0.963225 AATTAAACCTGGCGGCGTTT 59.037 45.000 16.71 16.71 36.26 3.60
2093 2176 0.524414 GAATTAAACCTGGCGGCGTT 59.476 50.000 9.37 0.00 0.00 4.84
2094 2177 0.322187 AGAATTAAACCTGGCGGCGT 60.322 50.000 9.37 0.00 0.00 5.68
2095 2178 0.808755 AAGAATTAAACCTGGCGGCG 59.191 50.000 0.51 0.51 0.00 6.46
2096 2179 3.313012 AAAAGAATTAAACCTGGCGGC 57.687 42.857 0.00 0.00 0.00 6.53
2097 2180 5.379732 TGTAAAAGAATTAAACCTGGCGG 57.620 39.130 0.00 0.00 0.00 6.13
2098 2181 7.981142 TCTATGTAAAAGAATTAAACCTGGCG 58.019 34.615 0.00 0.00 0.00 5.69
2122 2205 5.184096 TGTTCCTGTCTTCTGTGAGAGTATC 59.816 44.000 0.00 0.00 0.00 2.24
2123 2206 5.047660 GTGTTCCTGTCTTCTGTGAGAGTAT 60.048 44.000 0.00 0.00 0.00 2.12
2124 2207 4.278669 GTGTTCCTGTCTTCTGTGAGAGTA 59.721 45.833 0.00 0.00 0.00 2.59
2125 2208 3.068873 GTGTTCCTGTCTTCTGTGAGAGT 59.931 47.826 0.00 0.00 0.00 3.24
2126 2209 3.648009 GTGTTCCTGTCTTCTGTGAGAG 58.352 50.000 0.00 0.00 0.00 3.20
2127 2210 2.034685 CGTGTTCCTGTCTTCTGTGAGA 59.965 50.000 0.00 0.00 0.00 3.27
2128 2211 2.034685 TCGTGTTCCTGTCTTCTGTGAG 59.965 50.000 0.00 0.00 0.00 3.51
2129 2212 2.028876 TCGTGTTCCTGTCTTCTGTGA 58.971 47.619 0.00 0.00 0.00 3.58
2130 2213 2.223829 ACTCGTGTTCCTGTCTTCTGTG 60.224 50.000 0.00 0.00 0.00 3.66
2131 2214 2.032620 ACTCGTGTTCCTGTCTTCTGT 58.967 47.619 0.00 0.00 0.00 3.41
2132 2215 2.802787 ACTCGTGTTCCTGTCTTCTG 57.197 50.000 0.00 0.00 0.00 3.02
2133 2216 3.253677 CACTACTCGTGTTCCTGTCTTCT 59.746 47.826 0.00 0.00 38.84 2.85
2134 2217 3.566523 CACTACTCGTGTTCCTGTCTTC 58.433 50.000 0.00 0.00 38.84 2.87
2135 2218 3.644884 CACTACTCGTGTTCCTGTCTT 57.355 47.619 0.00 0.00 38.84 3.01
2146 2229 2.427453 CCTTAGCCATCACACTACTCGT 59.573 50.000 0.00 0.00 0.00 4.18
2147 2230 2.799917 GCCTTAGCCATCACACTACTCG 60.800 54.545 0.00 0.00 0.00 4.18
2148 2231 2.827652 GCCTTAGCCATCACACTACTC 58.172 52.381 0.00 0.00 0.00 2.59
2149 2232 2.990066 GCCTTAGCCATCACACTACT 57.010 50.000 0.00 0.00 0.00 2.57
2169 2252 2.859273 CTACCCTGTGGAAGGCTGCG 62.859 65.000 0.00 0.00 45.89 5.18
2170 2253 1.078143 CTACCCTGTGGAAGGCTGC 60.078 63.158 0.00 0.00 45.89 5.25
2171 2254 0.250513 GTCTACCCTGTGGAAGGCTG 59.749 60.000 0.00 0.00 45.89 4.85
2172 2255 0.178903 TGTCTACCCTGTGGAAGGCT 60.179 55.000 0.00 0.00 45.89 4.58
2173 2256 0.912486 ATGTCTACCCTGTGGAAGGC 59.088 55.000 0.00 0.00 45.89 4.35
2174 2257 1.909302 ACATGTCTACCCTGTGGAAGG 59.091 52.381 0.00 0.00 46.94 3.46
2175 2258 2.303022 ACACATGTCTACCCTGTGGAAG 59.697 50.000 0.00 0.00 43.53 3.46
2176 2259 2.334977 ACACATGTCTACCCTGTGGAA 58.665 47.619 0.00 0.00 43.53 3.53
2177 2260 2.024176 ACACATGTCTACCCTGTGGA 57.976 50.000 0.00 0.00 43.53 4.02
2178 2261 2.699954 GAACACATGTCTACCCTGTGG 58.300 52.381 0.00 0.00 43.53 4.17
2179 2262 2.029380 TCGAACACATGTCTACCCTGTG 60.029 50.000 0.00 9.92 44.51 3.66
2180 2263 2.244695 TCGAACACATGTCTACCCTGT 58.755 47.619 0.00 0.00 0.00 4.00
2181 2264 3.448686 GATCGAACACATGTCTACCCTG 58.551 50.000 0.00 0.00 0.00 4.45
2182 2265 2.431057 GGATCGAACACATGTCTACCCT 59.569 50.000 0.00 0.00 0.00 4.34
2183 2266 2.483188 GGGATCGAACACATGTCTACCC 60.483 54.545 0.00 0.00 0.00 3.69
2184 2267 2.431057 AGGGATCGAACACATGTCTACC 59.569 50.000 0.00 0.00 0.00 3.18
2185 2268 3.448686 CAGGGATCGAACACATGTCTAC 58.551 50.000 0.00 0.00 0.00 2.59
2186 2269 2.430694 CCAGGGATCGAACACATGTCTA 59.569 50.000 0.00 0.00 0.00 2.59
2187 2270 1.208052 CCAGGGATCGAACACATGTCT 59.792 52.381 0.00 0.00 0.00 3.41
2188 2271 1.066143 ACCAGGGATCGAACACATGTC 60.066 52.381 0.00 0.00 0.00 3.06
2189 2272 0.984230 ACCAGGGATCGAACACATGT 59.016 50.000 0.00 0.00 0.00 3.21
2190 2273 2.009774 GAACCAGGGATCGAACACATG 58.990 52.381 0.00 0.00 0.00 3.21
2191 2274 1.909302 AGAACCAGGGATCGAACACAT 59.091 47.619 0.00 0.00 0.00 3.21
2192 2275 1.001974 CAGAACCAGGGATCGAACACA 59.998 52.381 0.00 0.00 0.00 3.72
2193 2276 1.726853 CAGAACCAGGGATCGAACAC 58.273 55.000 0.00 0.00 0.00 3.32
2194 2277 0.036388 GCAGAACCAGGGATCGAACA 60.036 55.000 0.00 0.00 0.00 3.18
2195 2278 0.744771 GGCAGAACCAGGGATCGAAC 60.745 60.000 0.00 0.00 38.86 3.95
2196 2279 1.602237 GGCAGAACCAGGGATCGAA 59.398 57.895 0.00 0.00 38.86 3.71
2197 2280 2.367202 GGGCAGAACCAGGGATCGA 61.367 63.158 0.00 0.00 42.05 3.59
2198 2281 2.190578 GGGCAGAACCAGGGATCG 59.809 66.667 0.00 0.00 42.05 3.69
2199 2282 2.597903 GGGGCAGAACCAGGGATC 59.402 66.667 0.00 0.00 42.05 3.36
2200 2283 3.411517 CGGGGCAGAACCAGGGAT 61.412 66.667 0.00 0.00 42.05 3.85
2201 2284 4.974438 ACGGGGCAGAACCAGGGA 62.974 66.667 0.00 0.00 42.05 4.20
2202 2285 2.994643 AAAACGGGGCAGAACCAGGG 62.995 60.000 0.00 0.00 42.05 4.45
2203 2286 1.112916 AAAAACGGGGCAGAACCAGG 61.113 55.000 0.00 0.00 42.05 4.45
2204 2287 0.313987 GAAAAACGGGGCAGAACCAG 59.686 55.000 0.00 0.00 42.05 4.00
2205 2288 0.106419 AGAAAAACGGGGCAGAACCA 60.106 50.000 0.00 0.00 42.05 3.67
2206 2289 1.000607 GAAGAAAAACGGGGCAGAACC 60.001 52.381 0.00 0.00 37.93 3.62
2207 2290 1.000607 GGAAGAAAAACGGGGCAGAAC 60.001 52.381 0.00 0.00 0.00 3.01
2208 2291 1.324383 GGAAGAAAAACGGGGCAGAA 58.676 50.000 0.00 0.00 0.00 3.02
2209 2292 0.538746 GGGAAGAAAAACGGGGCAGA 60.539 55.000 0.00 0.00 0.00 4.26
2210 2293 0.539669 AGGGAAGAAAAACGGGGCAG 60.540 55.000 0.00 0.00 0.00 4.85
2211 2294 0.105913 AAGGGAAGAAAAACGGGGCA 60.106 50.000 0.00 0.00 0.00 5.36
2212 2295 1.045407 AAAGGGAAGAAAAACGGGGC 58.955 50.000 0.00 0.00 0.00 5.80
2213 2296 3.830744 AAAAAGGGAAGAAAAACGGGG 57.169 42.857 0.00 0.00 0.00 5.73
2230 2313 2.325082 GGCGCGCTGGAGAGAAAAA 61.325 57.895 32.29 0.00 0.00 1.94
2231 2314 2.742372 GGCGCGCTGGAGAGAAAA 60.742 61.111 32.29 0.00 0.00 2.29
2232 2315 3.649277 GAGGCGCGCTGGAGAGAAA 62.649 63.158 32.29 0.00 0.00 2.52
2233 2316 4.135153 GAGGCGCGCTGGAGAGAA 62.135 66.667 32.29 0.00 0.00 2.87
2246 2329 4.247380 CATGCGGGAGGAGGAGGC 62.247 72.222 0.00 0.00 32.11 4.70
2247 2330 4.247380 GCATGCGGGAGGAGGAGG 62.247 72.222 0.00 0.00 32.11 4.30
2248 2331 4.598894 CGCATGCGGGAGGAGGAG 62.599 72.222 31.99 0.00 32.11 3.69
2260 2343 3.202001 CAGGCCCGTTACCGCATG 61.202 66.667 0.00 0.00 0.00 4.06
2288 2371 2.798148 AATGAGGGGACGCGTTGACC 62.798 60.000 15.53 16.51 38.00 4.02
2289 2372 0.953960 AAATGAGGGGACGCGTTGAC 60.954 55.000 15.53 7.14 39.44 3.18
2290 2373 0.250553 AAAATGAGGGGACGCGTTGA 60.251 50.000 15.53 0.00 39.44 3.18
2291 2374 1.444836 TAAAATGAGGGGACGCGTTG 58.555 50.000 15.53 0.00 39.44 4.10
2292 2375 1.808343 GTTAAAATGAGGGGACGCGTT 59.192 47.619 15.53 0.00 41.41 4.84
2293 2376 1.002773 AGTTAAAATGAGGGGACGCGT 59.997 47.619 13.85 13.85 0.00 6.01
2294 2377 1.734163 AGTTAAAATGAGGGGACGCG 58.266 50.000 3.53 3.53 0.00 6.01
2295 2378 3.833442 CAAAGTTAAAATGAGGGGACGC 58.167 45.455 0.00 0.00 0.00 5.19
2296 2379 3.506067 AGCAAAGTTAAAATGAGGGGACG 59.494 43.478 0.00 0.00 0.00 4.79
2297 2380 5.710567 AGTAGCAAAGTTAAAATGAGGGGAC 59.289 40.000 0.00 0.00 0.00 4.46
2298 2381 5.887754 AGTAGCAAAGTTAAAATGAGGGGA 58.112 37.500 0.00 0.00 0.00 4.81
2299 2382 7.696992 TTAGTAGCAAAGTTAAAATGAGGGG 57.303 36.000 0.00 0.00 0.00 4.79
2300 2383 9.788960 GATTTAGTAGCAAAGTTAAAATGAGGG 57.211 33.333 0.00 0.00 0.00 4.30
2303 2386 9.840427 GCTGATTTAGTAGCAAAGTTAAAATGA 57.160 29.630 0.00 0.00 39.67 2.57
2304 2387 8.788813 CGCTGATTTAGTAGCAAAGTTAAAATG 58.211 33.333 0.00 0.00 39.87 2.32
2400 2483 8.749354 GGGTCAAATAAGATACAAGTTCCATTT 58.251 33.333 0.00 0.00 0.00 2.32
2522 2606 1.542472 CATTTGACACAGCAGGCATGA 59.458 47.619 0.62 0.00 0.00 3.07
2572 2656 2.032030 CCCAAACTCACTAACAGCAACG 60.032 50.000 0.00 0.00 0.00 4.10
2573 2657 3.003378 GTCCCAAACTCACTAACAGCAAC 59.997 47.826 0.00 0.00 0.00 4.17
2618 2703 9.908152 GTCCTAAACTTTGTTAAGCATAAATGT 57.092 29.630 0.00 0.00 34.60 2.71
2681 2766 5.542635 TGTGTAAGTTCCTAGGTCACAGAAT 59.457 40.000 9.08 0.00 32.05 2.40
2719 2804 3.696051 GCAGGGCTTATTTTCATGAGTCA 59.304 43.478 0.00 0.00 0.00 3.41
2760 2845 7.441017 TGGCATTAGCAACTAAATCACTTTTT 58.559 30.769 0.00 0.00 44.61 1.94
3626 3716 1.955778 CCAAATTGTGCCAGTGTCAGA 59.044 47.619 0.00 0.00 0.00 3.27
3724 3814 1.985473 AAACTGATGCTGCTTGGTCA 58.015 45.000 0.00 0.00 0.00 4.02
3871 3966 8.097038 GCAAGTATATCAGAATGTAAGGGATGA 58.903 37.037 0.00 0.00 37.40 2.92
4120 4215 0.109153 TGTGACCTGATGCAACTGCT 59.891 50.000 2.95 0.00 42.66 4.24
4578 4674 4.380867 CCAAATTAGGCAAGGTGATGACAC 60.381 45.833 0.00 0.00 45.27 3.67
5099 5195 1.452110 TCATGCGTTGTGATTCCCTG 58.548 50.000 0.00 0.00 0.00 4.45
5463 5559 8.809468 AAAGAGAGAGAAAAAGTAACCAAAGT 57.191 30.769 0.00 0.00 0.00 2.66
5682 5778 7.838884 ACTTATAAGTACAGAAGTCCAACTCC 58.161 38.462 16.60 0.00 37.52 3.85
5747 5844 1.442769 CCACCAGAAATCGTCCACAG 58.557 55.000 0.00 0.00 0.00 3.66
5812 5909 4.019321 ACTCATACTGCACAGGTAATTGGT 60.019 41.667 2.21 0.00 0.00 3.67
5882 5979 3.432186 CCCGAAGCTCATAAATCACTCCA 60.432 47.826 0.00 0.00 0.00 3.86
5935 6032 7.014326 ACAGTAATAGAACAGTCAACAGTGAGA 59.986 37.037 0.00 0.00 33.27 3.27
5966 6063 4.950050 ACCTGATAGGCTGATAAAGAACG 58.050 43.478 0.00 0.00 39.63 3.95
5984 6081 8.241367 GGATACCATTTACAAAACAGTAACCTG 58.759 37.037 0.00 0.00 44.68 4.00
6013 6110 9.139174 CAAGAAACACATTCACAACTTTAAAGT 57.861 29.630 15.22 15.22 40.72 2.66
6014 6111 8.110002 GCAAGAAACACATTCACAACTTTAAAG 58.890 33.333 13.76 13.76 40.72 1.85
6094 6191 5.473504 AGTGAACACAATAACCTGAATGGAC 59.526 40.000 7.68 0.00 39.71 4.02
6162 6259 6.109359 CACAAACCACAAGTTATTTTCCCAA 58.891 36.000 0.00 0.00 37.88 4.12
6164 6261 5.666462 ACACAAACCACAAGTTATTTTCCC 58.334 37.500 0.00 0.00 37.88 3.97
6242 6339 5.570034 GCACCCTCTAAACCTGTATTACACA 60.570 44.000 0.00 0.00 35.30 3.72
6250 6347 1.003718 GCGCACCCTCTAAACCTGT 60.004 57.895 0.30 0.00 0.00 4.00
6285 6382 4.888326 ATTTTAGCCTGATTTGCCAACA 57.112 36.364 0.00 0.00 0.00 3.33
6288 6385 5.480642 TTGAATTTTAGCCTGATTTGCCA 57.519 34.783 0.00 0.00 0.00 4.92
6334 7410 7.361371 GGGTTCTTGTTTGTTTGGGTTAAAAAG 60.361 37.037 0.00 0.00 0.00 2.27
6335 7411 6.430308 GGGTTCTTGTTTGTTTGGGTTAAAAA 59.570 34.615 0.00 0.00 0.00 1.94
6336 7412 5.938710 GGGTTCTTGTTTGTTTGGGTTAAAA 59.061 36.000 0.00 0.00 0.00 1.52
6337 7413 5.248705 AGGGTTCTTGTTTGTTTGGGTTAAA 59.751 36.000 0.00 0.00 0.00 1.52
6338 7414 4.778427 AGGGTTCTTGTTTGTTTGGGTTAA 59.222 37.500 0.00 0.00 0.00 2.01
6339 7415 4.354662 AGGGTTCTTGTTTGTTTGGGTTA 58.645 39.130 0.00 0.00 0.00 2.85
6367 7443 5.007034 TCCTGTTTGTGTCTTTGAGAAACA 58.993 37.500 0.00 0.00 40.53 2.83
6487 7564 1.614413 ACGAGAGGAAGAAGTCACACC 59.386 52.381 0.00 0.00 0.00 4.16
6548 7625 7.573283 GCTTTCCAGGTTATGTCAGTTAGTTTC 60.573 40.741 0.00 0.00 0.00 2.78
6724 7804 5.812642 ACCATGCTTTCGTAGTGATTAGAAG 59.187 40.000 0.00 0.00 0.00 2.85
6726 7806 5.339008 ACCATGCTTTCGTAGTGATTAGA 57.661 39.130 0.00 0.00 0.00 2.10
6777 7871 0.625849 GGGAGGGAGCTTCCAAATGA 59.374 55.000 15.31 0.00 38.64 2.57
6833 7927 5.948588 TGCGCACATGTGTTCTTATTTAAT 58.051 33.333 26.01 0.00 0.00 1.40
6840 7934 0.308684 CACTGCGCACATGTGTTCTT 59.691 50.000 26.01 5.59 0.00 2.52
7363 8466 6.492429 AGAACAATGGCATTACATCATAGCAT 59.508 34.615 13.23 0.00 0.00 3.79
7409 8512 0.955178 AGCTCCATGTCCGATACTCG 59.045 55.000 0.00 0.00 40.07 4.18
7414 8517 1.414181 CTTACCAGCTCCATGTCCGAT 59.586 52.381 0.00 0.00 0.00 4.18
7532 8635 6.668541 AATACATCAACTTTGTCGATGAGG 57.331 37.500 5.75 0.00 39.09 3.86
7742 8849 1.466167 CCTTATGCACACTGACACAGC 59.534 52.381 0.00 0.00 34.37 4.40
7753 8860 4.843220 AATATGCTTGAGCCTTATGCAC 57.157 40.909 0.00 0.00 44.83 4.57
7800 8907 2.026822 ACCTCCATGCAGGTTTCTACAG 60.027 50.000 1.14 0.00 45.24 2.74
7841 8948 6.671190 TCAAAGACAAACAACTCATATGCAG 58.329 36.000 0.00 0.00 0.00 4.41
7842 8949 6.631971 TCAAAGACAAACAACTCATATGCA 57.368 33.333 0.00 0.00 0.00 3.96
7948 9057 8.043113 ACACTAGAGATGTAAGCAATCAATCAA 58.957 33.333 0.00 0.00 0.00 2.57
7959 9069 7.436673 GCAGGTAAATGACACTAGAGATGTAAG 59.563 40.741 0.00 0.00 0.00 2.34
8270 9602 5.065914 AGCAAGCTTTCATTGTAGACTTCA 58.934 37.500 0.00 0.00 0.00 3.02
8361 9693 1.067354 GCAGGACTCCAATGCCAAAAG 60.067 52.381 0.00 0.00 33.81 2.27
8492 9828 3.840666 GGAGGCCCTGATGATATCTTGTA 59.159 47.826 0.00 0.00 0.00 2.41
8667 10004 5.450274 CGATGACCATGCCAAATTTACATCA 60.450 40.000 0.00 1.78 33.61 3.07
8908 10251 5.480642 TCCAAGGAAATTTTATGCAAGCA 57.519 34.783 0.00 0.00 0.00 3.91
8955 10298 9.609346 GCCTATCCTCATAAACTGTTTTTAGTA 57.391 33.333 11.48 0.00 0.00 1.82
8956 10299 8.107095 TGCCTATCCTCATAAACTGTTTTTAGT 58.893 33.333 11.48 0.00 0.00 2.24
8957 10300 8.506168 TGCCTATCCTCATAAACTGTTTTTAG 57.494 34.615 11.48 6.65 0.00 1.85
8958 10301 7.067008 GCTGCCTATCCTCATAAACTGTTTTTA 59.933 37.037 11.48 0.00 0.00 1.52
8959 10302 6.127619 GCTGCCTATCCTCATAAACTGTTTTT 60.128 38.462 11.48 0.34 0.00 1.94
8960 10303 5.358160 GCTGCCTATCCTCATAAACTGTTTT 59.642 40.000 11.48 0.00 0.00 2.43
8961 10304 4.884164 GCTGCCTATCCTCATAAACTGTTT 59.116 41.667 10.98 10.98 0.00 2.83
8962 10305 4.455606 GCTGCCTATCCTCATAAACTGTT 58.544 43.478 0.00 0.00 0.00 3.16
8963 10306 3.493350 CGCTGCCTATCCTCATAAACTGT 60.493 47.826 0.00 0.00 0.00 3.55
8964 10307 3.062763 CGCTGCCTATCCTCATAAACTG 58.937 50.000 0.00 0.00 0.00 3.16
8965 10308 2.965831 TCGCTGCCTATCCTCATAAACT 59.034 45.455 0.00 0.00 0.00 2.66
8966 10309 3.386768 TCGCTGCCTATCCTCATAAAC 57.613 47.619 0.00 0.00 0.00 2.01
8967 10310 4.623932 ATTCGCTGCCTATCCTCATAAA 57.376 40.909 0.00 0.00 0.00 1.40
8968 10311 4.160439 CCTATTCGCTGCCTATCCTCATAA 59.840 45.833 0.00 0.00 0.00 1.90
8969 10312 3.701542 CCTATTCGCTGCCTATCCTCATA 59.298 47.826 0.00 0.00 0.00 2.15
8970 10313 2.499289 CCTATTCGCTGCCTATCCTCAT 59.501 50.000 0.00 0.00 0.00 2.90
8971 10314 1.895798 CCTATTCGCTGCCTATCCTCA 59.104 52.381 0.00 0.00 0.00 3.86
8972 10315 1.404851 GCCTATTCGCTGCCTATCCTC 60.405 57.143 0.00 0.00 0.00 3.71
8973 10316 0.610687 GCCTATTCGCTGCCTATCCT 59.389 55.000 0.00 0.00 0.00 3.24
8974 10317 0.391793 GGCCTATTCGCTGCCTATCC 60.392 60.000 0.00 0.00 42.01 2.59
8975 10318 3.145228 GGCCTATTCGCTGCCTATC 57.855 57.895 0.00 0.00 42.01 2.08
8979 10322 1.728490 CCAAAGGCCTATTCGCTGCC 61.728 60.000 5.16 0.00 45.70 4.85
8980 10323 1.729881 CCAAAGGCCTATTCGCTGC 59.270 57.895 5.16 0.00 0.00 5.25
8981 10324 1.729881 GCCAAAGGCCTATTCGCTG 59.270 57.895 5.16 0.00 44.06 5.18
8982 10325 4.242602 GCCAAAGGCCTATTCGCT 57.757 55.556 5.16 0.00 44.06 4.93
8992 10335 1.615392 CCAAGAGAACAAGGCCAAAGG 59.385 52.381 5.01 0.00 0.00 3.11
8993 10336 1.000171 GCCAAGAGAACAAGGCCAAAG 60.000 52.381 5.01 0.00 41.25 2.77
8994 10337 1.039856 GCCAAGAGAACAAGGCCAAA 58.960 50.000 5.01 0.00 41.25 3.28
8995 10338 2.732289 GCCAAGAGAACAAGGCCAA 58.268 52.632 5.01 0.00 41.25 4.52
8996 10339 4.500265 GCCAAGAGAACAAGGCCA 57.500 55.556 5.01 0.00 41.25 5.36
9016 10359 6.010219 ACAAGGTCAAAGTAATGGCTTACAT 58.990 36.000 8.75 0.00 43.07 2.29
9017 10360 5.381757 ACAAGGTCAAAGTAATGGCTTACA 58.618 37.500 8.75 0.00 39.81 2.41
9018 10361 5.959618 ACAAGGTCAAAGTAATGGCTTAC 57.040 39.130 0.00 0.00 37.99 2.34
9053 10396 2.958355 CAAAGAGAACAAGCCCAAAGGA 59.042 45.455 0.00 0.00 33.47 3.36
9090 10433 6.969366 TCATTTACAGTGAGTGAAATGTTGG 58.031 36.000 16.95 2.29 39.32 3.77
9094 10437 7.301054 GTTCCTCATTTACAGTGAGTGAAATG 58.699 38.462 13.92 13.92 41.13 2.32
9095 10438 6.431234 GGTTCCTCATTTACAGTGAGTGAAAT 59.569 38.462 0.00 0.00 41.13 2.17
9096 10439 5.763204 GGTTCCTCATTTACAGTGAGTGAAA 59.237 40.000 0.00 0.00 41.13 2.69
9097 10440 5.163248 TGGTTCCTCATTTACAGTGAGTGAA 60.163 40.000 0.00 3.63 41.13 3.18
9098 10441 4.346709 TGGTTCCTCATTTACAGTGAGTGA 59.653 41.667 0.00 0.00 41.13 3.41
9099 10442 4.641396 TGGTTCCTCATTTACAGTGAGTG 58.359 43.478 0.00 0.00 41.13 3.51
9100 10443 4.974645 TGGTTCCTCATTTACAGTGAGT 57.025 40.909 0.00 0.00 41.13 3.41
9101 10444 5.063204 TGTTGGTTCCTCATTTACAGTGAG 58.937 41.667 0.00 0.00 42.11 3.51
9102 10445 5.042463 TGTTGGTTCCTCATTTACAGTGA 57.958 39.130 0.00 0.00 0.00 3.41
9103 10446 5.964958 ATGTTGGTTCCTCATTTACAGTG 57.035 39.130 0.00 0.00 0.00 3.66
9104 10447 6.549364 TGAAATGTTGGTTCCTCATTTACAGT 59.451 34.615 17.42 0.00 40.38 3.55
9105 10448 6.863126 GTGAAATGTTGGTTCCTCATTTACAG 59.137 38.462 17.42 0.00 40.38 2.74
9106 10449 6.549364 AGTGAAATGTTGGTTCCTCATTTACA 59.451 34.615 17.42 15.04 40.38 2.41
9107 10450 6.981722 AGTGAAATGTTGGTTCCTCATTTAC 58.018 36.000 17.42 15.61 40.38 2.01
9108 10451 6.072728 CGAGTGAAATGTTGGTTCCTCATTTA 60.073 38.462 17.42 9.39 40.38 1.40
9109 10452 5.278463 CGAGTGAAATGTTGGTTCCTCATTT 60.278 40.000 17.42 17.42 42.12 2.32
9110 10453 4.216257 CGAGTGAAATGTTGGTTCCTCATT 59.784 41.667 6.88 6.88 33.94 2.57
9111 10454 3.753272 CGAGTGAAATGTTGGTTCCTCAT 59.247 43.478 0.00 0.00 0.00 2.90
9112 10455 3.138304 CGAGTGAAATGTTGGTTCCTCA 58.862 45.455 0.00 0.00 0.00 3.86
9113 10456 2.095718 GCGAGTGAAATGTTGGTTCCTC 60.096 50.000 0.00 0.00 0.00 3.71
9114 10457 1.880027 GCGAGTGAAATGTTGGTTCCT 59.120 47.619 0.00 0.00 0.00 3.36
9115 10458 1.880027 AGCGAGTGAAATGTTGGTTCC 59.120 47.619 0.00 0.00 0.00 3.62
9116 10459 2.290641 ACAGCGAGTGAAATGTTGGTTC 59.709 45.455 0.00 0.00 0.00 3.62
9117 10460 2.297701 ACAGCGAGTGAAATGTTGGTT 58.702 42.857 0.00 0.00 0.00 3.67
9118 10461 1.967319 ACAGCGAGTGAAATGTTGGT 58.033 45.000 0.00 0.00 0.00 3.67
9119 10462 4.481930 TTTACAGCGAGTGAAATGTTGG 57.518 40.909 0.00 0.00 0.00 3.77
9120 10463 5.688823 TCATTTACAGCGAGTGAAATGTTG 58.311 37.500 16.56 5.37 39.32 3.33
9121 10464 5.106555 CCTCATTTACAGCGAGTGAAATGTT 60.107 40.000 16.56 0.00 39.32 2.71
9122 10465 4.393062 CCTCATTTACAGCGAGTGAAATGT 59.607 41.667 16.56 0.00 39.32 2.71
9123 10466 4.631377 TCCTCATTTACAGCGAGTGAAATG 59.369 41.667 13.94 13.94 39.54 2.32
9124 10467 4.832248 TCCTCATTTACAGCGAGTGAAAT 58.168 39.130 0.00 0.00 0.00 2.17
9125 10468 4.265904 TCCTCATTTACAGCGAGTGAAA 57.734 40.909 0.00 0.00 0.00 2.69
9126 10469 3.953712 TCCTCATTTACAGCGAGTGAA 57.046 42.857 0.00 0.00 0.00 3.18
9127 10470 3.953712 TTCCTCATTTACAGCGAGTGA 57.046 42.857 0.00 0.00 0.00 3.41
9128 10471 6.092122 TGTTAATTCCTCATTTACAGCGAGTG 59.908 38.462 0.00 0.00 30.99 3.51
9129 10472 6.170506 TGTTAATTCCTCATTTACAGCGAGT 58.829 36.000 0.00 0.00 30.99 4.18
9130 10473 6.662414 TGTTAATTCCTCATTTACAGCGAG 57.338 37.500 0.00 0.00 30.99 5.03
9131 10474 7.624360 AATGTTAATTCCTCATTTACAGCGA 57.376 32.000 0.00 0.00 37.72 4.93
9132 10475 7.967854 TGAAATGTTAATTCCTCATTTACAGCG 59.032 33.333 12.23 0.00 37.72 5.18
9133 10476 9.076596 GTGAAATGTTAATTCCTCATTTACAGC 57.923 33.333 12.23 4.95 37.72 4.40
9137 10480 9.638239 GCAAGTGAAATGTTAATTCCTCATTTA 57.362 29.630 12.23 3.69 40.38 1.40
9138 10481 8.370182 AGCAAGTGAAATGTTAATTCCTCATTT 58.630 29.630 12.15 12.15 42.12 2.32
9139 10482 7.816031 CAGCAAGTGAAATGTTAATTCCTCATT 59.184 33.333 0.00 0.00 33.94 2.57
9140 10483 7.039504 ACAGCAAGTGAAATGTTAATTCCTCAT 60.040 33.333 0.00 0.00 0.00 2.90
9141 10484 6.265196 ACAGCAAGTGAAATGTTAATTCCTCA 59.735 34.615 0.00 0.00 0.00 3.86
9142 10485 6.681777 ACAGCAAGTGAAATGTTAATTCCTC 58.318 36.000 0.00 0.00 0.00 3.71
9143 10486 6.655078 ACAGCAAGTGAAATGTTAATTCCT 57.345 33.333 0.00 0.00 0.00 3.36
9144 10487 8.699749 GTTTACAGCAAGTGAAATGTTAATTCC 58.300 33.333 0.00 0.00 0.00 3.01
9145 10488 8.417176 CGTTTACAGCAAGTGAAATGTTAATTC 58.583 33.333 0.00 0.00 0.00 2.17
9146 10489 8.132362 TCGTTTACAGCAAGTGAAATGTTAATT 58.868 29.630 0.00 0.00 0.00 1.40
9147 10490 7.644490 TCGTTTACAGCAAGTGAAATGTTAAT 58.356 30.769 0.00 0.00 0.00 1.40
9148 10491 7.011576 TCTCGTTTACAGCAAGTGAAATGTTAA 59.988 33.333 0.00 0.00 0.00 2.01
9149 10492 6.480651 TCTCGTTTACAGCAAGTGAAATGTTA 59.519 34.615 0.00 0.00 0.00 2.41
9150 10493 5.295787 TCTCGTTTACAGCAAGTGAAATGTT 59.704 36.000 0.00 0.00 0.00 2.71
9151 10494 4.814234 TCTCGTTTACAGCAAGTGAAATGT 59.186 37.500 0.00 0.00 0.00 2.71
9161 10504 6.435430 AAATATTGCATCTCGTTTACAGCA 57.565 33.333 0.00 0.00 0.00 4.41
9170 10556 7.474398 TTCTCTCAGAAAATATTGCATCTCG 57.526 36.000 0.00 0.00 29.99 4.04
9186 10572 6.453092 AGCAATCACCAAAATTTTCTCTCAG 58.547 36.000 0.00 0.00 0.00 3.35
9192 10578 7.489574 TTACCAAGCAATCACCAAAATTTTC 57.510 32.000 0.00 0.00 0.00 2.29
9193 10579 7.718753 TGATTACCAAGCAATCACCAAAATTTT 59.281 29.630 0.00 0.00 37.46 1.82
9424 10812 4.039703 GGAAAAGTTTGCCGTTTGTAGAC 58.960 43.478 0.00 0.00 0.00 2.59
9479 10867 5.464389 AGTTTACCGCGTGGACATATATTTC 59.536 40.000 24.59 0.84 39.21 2.17
9483 10871 4.389890 AAGTTTACCGCGTGGACATATA 57.610 40.909 24.59 0.00 39.21 0.86
9556 10944 6.071221 TCCAAACTCTTGCATATGCTCATTTT 60.071 34.615 27.13 16.27 42.66 1.82
9560 10948 3.691118 GTCCAAACTCTTGCATATGCTCA 59.309 43.478 27.13 13.67 42.66 4.26
9570 10958 2.880890 CTGAACCAGGTCCAAACTCTTG 59.119 50.000 0.00 0.00 0.00 3.02
9614 11002 3.517602 GTTTTCCAAGTCCCAAACACAC 58.482 45.455 0.00 0.00 0.00 3.82
9635 11023 1.625818 AGCACTGAACTAGGTCCAAGG 59.374 52.381 5.05 0.00 0.00 3.61
9636 11024 2.300152 TGAGCACTGAACTAGGTCCAAG 59.700 50.000 5.05 0.00 0.00 3.61
9691 11079 6.865205 CAGTTTGGACTTGAAAAATGAGGATC 59.135 38.462 0.00 0.00 34.24 3.36
9912 11340 6.319658 GTCATGTCATGGATGTAGAACCAAAT 59.680 38.462 12.90 0.00 39.69 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.