Multiple sequence alignment - TraesCS5D01G547600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G547600 chr5D 100.000 5430 0 0 1 5430 555634864 555640293 0.000000e+00 10028.0
1 TraesCS5D01G547600 chr5D 87.115 3966 489 18 582 4534 555555121 555559077 0.000000e+00 4473.0
2 TraesCS5D01G547600 chr5D 81.519 3528 626 24 919 4436 495551890 495548379 0.000000e+00 2880.0
3 TraesCS5D01G547600 chr5D 80.422 3463 623 42 991 4434 555062242 555065668 0.000000e+00 2588.0
4 TraesCS5D01G547600 chr5D 80.310 3423 626 43 991 4387 555906756 555910156 0.000000e+00 2543.0
5 TraesCS5D01G547600 chr5D 80.315 3302 618 30 1100 4387 555322060 555325343 0.000000e+00 2468.0
6 TraesCS5D01G547600 chr5D 79.534 3474 655 44 991 4435 555501375 555504821 0.000000e+00 2425.0
7 TraesCS5D01G547600 chr5D 78.914 3424 668 47 991 4387 464701185 464697789 0.000000e+00 2274.0
8 TraesCS5D01G547600 chr5D 78.437 2713 547 33 1185 3881 555356791 555359481 0.000000e+00 1735.0
9 TraesCS5D01G547600 chr5D 88.950 543 39 17 1 535 555554595 555555124 0.000000e+00 651.0
10 TraesCS5D01G547600 chr5D 88.372 258 24 6 4725 4978 555559158 555559413 6.830000e-79 305.0
11 TraesCS5D01G547600 chr5D 80.952 273 27 14 652 904 495552551 495552284 5.550000e-45 193.0
12 TraesCS5D01G547600 chr5B 87.536 4814 509 40 206 5004 695815169 695810432 0.000000e+00 5481.0
13 TraesCS5D01G547600 chr5B 88.958 3233 321 18 1778 5004 695695979 695692777 0.000000e+00 3960.0
14 TraesCS5D01G547600 chr5B 79.988 3463 650 35 987 4432 695493872 695490436 0.000000e+00 2516.0
15 TraesCS5D01G547600 chr5B 79.388 3299 647 29 1103 4387 571606225 571609504 0.000000e+00 2294.0
16 TraesCS5D01G547600 chr5B 94.887 1017 42 4 124 1137 695701243 695700234 0.000000e+00 1581.0
17 TraesCS5D01G547600 chr5B 80.557 1975 358 21 2461 4426 695875784 695873827 0.000000e+00 1496.0
18 TraesCS5D01G547600 chr4A 80.952 3297 599 27 1103 4387 613743990 613740711 0.000000e+00 2582.0
19 TraesCS5D01G547600 chr4A 87.719 57 7 0 1551 1607 714100435 714100491 3.510000e-07 67.6
20 TraesCS5D01G547600 chr6A 84.266 1430 210 14 3050 4475 11233972 11232554 0.000000e+00 1380.0
21 TraesCS5D01G547600 chr6A 78.015 1924 399 23 1125 3036 11233975 11235886 0.000000e+00 1188.0
22 TraesCS5D01G547600 chr6A 89.412 425 39 4 5004 5428 6416564 6416146 1.040000e-146 531.0
23 TraesCS5D01G547600 chr6A 85.227 88 9 2 371 454 610293894 610293807 2.690000e-13 87.9
24 TraesCS5D01G547600 chr1A 92.037 427 29 2 5004 5430 115947350 115946929 3.620000e-166 595.0
25 TraesCS5D01G547600 chr1A 89.019 428 39 4 5003 5430 464921273 464920854 1.730000e-144 523.0
26 TraesCS5D01G547600 chr5A 87.765 425 47 3 5004 5428 512077908 512077489 4.890000e-135 492.0
27 TraesCS5D01G547600 chr4D 89.946 368 30 4 5038 5404 214744551 214744912 8.240000e-128 468.0
28 TraesCS5D01G547600 chr4D 86.353 425 52 3 5005 5428 477149040 477148621 4.960000e-125 459.0
29 TraesCS5D01G547600 chr4B 83.916 429 64 3 5002 5430 670063005 670063428 6.550000e-109 405.0
30 TraesCS5D01G547600 chr6B 82.412 398 62 4 5003 5400 413918944 413918555 1.870000e-89 340.0
31 TraesCS5D01G547600 chr2B 96.154 130 5 0 5004 5133 106378691 106378562 4.260000e-51 213.0
32 TraesCS5D01G547600 chr1D 88.591 149 13 3 5282 5430 12164868 12165012 1.550000e-40 178.0
33 TraesCS5D01G547600 chr3B 87.037 54 7 0 401 454 687465770 687465823 1.630000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G547600 chr5D 555634864 555640293 5429 False 10028.000000 10028 100.000000 1 5430 1 chr5D.!!$F5 5429
1 TraesCS5D01G547600 chr5D 555062242 555065668 3426 False 2588.000000 2588 80.422000 991 4434 1 chr5D.!!$F1 3443
2 TraesCS5D01G547600 chr5D 555906756 555910156 3400 False 2543.000000 2543 80.310000 991 4387 1 chr5D.!!$F6 3396
3 TraesCS5D01G547600 chr5D 555322060 555325343 3283 False 2468.000000 2468 80.315000 1100 4387 1 chr5D.!!$F2 3287
4 TraesCS5D01G547600 chr5D 555501375 555504821 3446 False 2425.000000 2425 79.534000 991 4435 1 chr5D.!!$F4 3444
5 TraesCS5D01G547600 chr5D 464697789 464701185 3396 True 2274.000000 2274 78.914000 991 4387 1 chr5D.!!$R1 3396
6 TraesCS5D01G547600 chr5D 555554595 555559413 4818 False 1809.666667 4473 88.145667 1 4978 3 chr5D.!!$F7 4977
7 TraesCS5D01G547600 chr5D 555356791 555359481 2690 False 1735.000000 1735 78.437000 1185 3881 1 chr5D.!!$F3 2696
8 TraesCS5D01G547600 chr5D 495548379 495552551 4172 True 1536.500000 2880 81.235500 652 4436 2 chr5D.!!$R2 3784
9 TraesCS5D01G547600 chr5B 695810432 695815169 4737 True 5481.000000 5481 87.536000 206 5004 1 chr5B.!!$R4 4798
10 TraesCS5D01G547600 chr5B 695692777 695695979 3202 True 3960.000000 3960 88.958000 1778 5004 1 chr5B.!!$R2 3226
11 TraesCS5D01G547600 chr5B 695490436 695493872 3436 True 2516.000000 2516 79.988000 987 4432 1 chr5B.!!$R1 3445
12 TraesCS5D01G547600 chr5B 571606225 571609504 3279 False 2294.000000 2294 79.388000 1103 4387 1 chr5B.!!$F1 3284
13 TraesCS5D01G547600 chr5B 695700234 695701243 1009 True 1581.000000 1581 94.887000 124 1137 1 chr5B.!!$R3 1013
14 TraesCS5D01G547600 chr5B 695873827 695875784 1957 True 1496.000000 1496 80.557000 2461 4426 1 chr5B.!!$R5 1965
15 TraesCS5D01G547600 chr4A 613740711 613743990 3279 True 2582.000000 2582 80.952000 1103 4387 1 chr4A.!!$R1 3284
16 TraesCS5D01G547600 chr6A 11232554 11233972 1418 True 1380.000000 1380 84.266000 3050 4475 1 chr6A.!!$R2 1425
17 TraesCS5D01G547600 chr6A 11233975 11235886 1911 False 1188.000000 1188 78.015000 1125 3036 1 chr6A.!!$F1 1911

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
580 590 0.890683 ATCTTACGAACCGGAACCGT 59.109 50.0 9.46 16.66 39.94 4.83 F
1462 1886 1.098712 CCTTACGAGGCTCGAGCTCT 61.099 60.0 40.35 28.28 43.74 4.09 F
1830 2259 0.107703 TTAGCCTCCCGATGTTGCAG 60.108 55.0 0.00 0.00 0.00 4.41 F
2403 2832 0.249398 ACTACGTGGGCAATCTCACC 59.751 55.0 3.26 0.00 0.00 4.02 F
3349 3790 0.393132 TTTTGCCGATGCCACCGATA 60.393 50.0 0.00 0.00 36.33 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1476 1900 0.106419 TTTGGCCCGAGAGTTGGTTT 60.106 50.0 0.00 0.00 0.00 3.27 R
3414 3855 0.322456 TTCCGCATCCCAAGAGGTTG 60.322 55.0 0.00 0.00 38.25 3.77 R
3418 3859 0.393537 AAGCTTCCGCATCCCAAGAG 60.394 55.0 0.00 0.00 39.10 2.85 R
3510 3951 0.527565 CGAAACTTTGGATGGCCTGG 59.472 55.0 3.32 0.00 34.31 4.45 R
5216 5700 0.035598 CAATGGTGTGTACGGGACCA 59.964 55.0 11.61 11.61 43.83 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 117 8.550376 ACATTTCATGAACAGTTTTTAATGCAC 58.450 29.630 7.89 0.00 0.00 4.57
115 118 8.549548 CATTTCATGAACAGTTTTTAATGCACA 58.450 29.630 7.89 0.00 0.00 4.57
126 129 9.195411 CAGTTTTTAATGCACAGTGAACATTAT 57.805 29.630 17.34 5.74 36.46 1.28
359 366 2.045536 CCTTGGGCTCACTCCAGC 60.046 66.667 0.00 0.00 38.84 4.85
360 367 2.435586 CTTGGGCTCACTCCAGCG 60.436 66.667 0.00 0.00 40.68 5.18
364 371 3.200593 GGCTCACTCCAGCGCATG 61.201 66.667 11.47 4.88 40.68 4.06
365 372 2.435586 GCTCACTCCAGCGCATGT 60.436 61.111 11.47 0.00 0.00 3.21
536 546 1.300931 GGCACGTGCAGAGAGTCAA 60.301 57.895 38.60 0.00 44.36 3.18
537 547 1.287730 GGCACGTGCAGAGAGTCAAG 61.288 60.000 38.60 0.00 44.36 3.02
579 589 1.274596 CATCTTACGAACCGGAACCG 58.725 55.000 9.46 11.06 39.44 4.44
580 590 0.890683 ATCTTACGAACCGGAACCGT 59.109 50.000 9.46 16.66 39.94 4.83
1021 1430 1.153086 GCCGCTCCATCCATGTCTT 60.153 57.895 0.00 0.00 0.00 3.01
1039 1448 2.704065 TCTTCCCGTATTCCCATCTTCC 59.296 50.000 0.00 0.00 0.00 3.46
1433 1857 3.374764 TGTCTGATGCCATACCTACTGT 58.625 45.455 0.00 0.00 0.00 3.55
1446 1870 4.143406 ACCTACTGTCCTAGGAAACCTT 57.857 45.455 14.65 0.00 37.35 3.50
1462 1886 1.098712 CCTTACGAGGCTCGAGCTCT 61.099 60.000 40.35 28.28 43.74 4.09
1476 1900 5.734786 GCTCGAGCTCTTTAATCTAGCTTCA 60.735 44.000 29.88 0.00 46.29 3.02
1503 1927 2.612430 TCGGGCCAAATCCCTCCA 60.612 61.111 4.39 0.00 44.30 3.86
1582 2010 1.034838 TGGCCAAATACCACCGCATC 61.035 55.000 0.61 0.00 30.29 3.91
1601 2029 4.677779 GCATCTGTTCAACAACACACCTTT 60.678 41.667 0.00 0.00 37.61 3.11
1665 2093 0.389296 TACCACACTCCGTTGCATCG 60.389 55.000 10.22 10.22 0.00 3.84
1673 2101 2.030717 ACTCCGTTGCATCGCTATCTAG 60.031 50.000 11.68 4.54 0.00 2.43
1680 2108 2.365293 TGCATCGCTATCTAGGCTTGAA 59.635 45.455 2.10 0.00 0.00 2.69
1694 2122 5.167303 AGGCTTGAAGTCTTTAACCTAGG 57.833 43.478 7.41 7.41 0.00 3.02
1698 2126 5.818336 GCTTGAAGTCTTTAACCTAGGGATC 59.182 44.000 14.81 0.00 0.00 3.36
1752 2180 2.645838 ACAACAAGTCCAGACTGCAT 57.354 45.000 0.05 0.00 41.58 3.96
1754 2182 2.158769 ACAACAAGTCCAGACTGCATGA 60.159 45.455 0.05 0.00 41.58 3.07
1759 2187 3.533606 AGTCCAGACTGCATGACATAC 57.466 47.619 11.43 0.00 40.75 2.39
1775 2204 4.243270 GACATACTACTTGCAGGAAACGT 58.757 43.478 1.40 0.00 0.00 3.99
1821 2250 3.251004 GCAATCATAGTTTTAGCCTCCCG 59.749 47.826 0.00 0.00 0.00 5.14
1830 2259 0.107703 TTAGCCTCCCGATGTTGCAG 60.108 55.000 0.00 0.00 0.00 4.41
1832 2261 2.109126 GCCTCCCGATGTTGCAGAC 61.109 63.158 0.00 0.00 0.00 3.51
1843 2272 4.267690 CGATGTTGCAGACTATTTCGCTAA 59.732 41.667 0.00 0.00 0.00 3.09
1884 2313 2.668212 TTTCCAGCCGGTCTTGCG 60.668 61.111 1.90 0.00 0.00 4.85
1914 2343 6.826741 GCCAGTACCTCCAAGTAATTGATTTA 59.173 38.462 4.10 0.00 0.00 1.40
1977 2406 3.004734 CCAAATTGTCACACCTCCAAGTC 59.995 47.826 0.00 0.00 0.00 3.01
1980 2409 1.048601 TGTCACACCTCCAAGTCCTC 58.951 55.000 0.00 0.00 0.00 3.71
2026 2455 0.255318 CTCCATCCCAGCTGCTCTTT 59.745 55.000 8.66 0.00 0.00 2.52
2027 2456 0.700564 TCCATCCCAGCTGCTCTTTT 59.299 50.000 8.66 0.00 0.00 2.27
2034 2463 4.012374 TCCCAGCTGCTCTTTTTAATCTG 58.988 43.478 8.66 0.00 0.00 2.90
2064 2493 3.655615 ACTGTACTAGACCTCTCCAGG 57.344 52.381 0.00 0.00 46.87 4.45
2081 2510 2.276740 GGGCAATCTGACAGGGGG 59.723 66.667 1.81 0.00 0.00 5.40
2112 2541 5.053145 CCAGAACTAGGTCTTATGCATGAC 58.947 45.833 7.83 9.08 0.00 3.06
2145 2574 5.653330 TCTGCATCTTGAAGGCAATCAATTA 59.347 36.000 6.25 0.14 45.39 1.40
2146 2575 6.322969 TCTGCATCTTGAAGGCAATCAATTAT 59.677 34.615 6.25 2.13 45.39 1.28
2161 2590 9.768662 GCAATCAATTATCAGGTAAAATTCCAT 57.231 29.630 0.00 0.00 0.00 3.41
2167 2596 9.713684 AATTATCAGGTAAAATTCCATCTTCCA 57.286 29.630 0.00 0.00 0.00 3.53
2203 2632 6.369629 TCCAAATTGTCTTTCCTAGGTTTGA 58.630 36.000 9.08 2.55 0.00 2.69
2206 2635 7.308830 CCAAATTGTCTTTCCTAGGTTTGAGAG 60.309 40.741 9.08 0.00 0.00 3.20
2219 2648 9.401058 CCTAGGTTTGAGAGATAATCAATTGTT 57.599 33.333 5.13 2.21 36.60 2.83
2239 2668 1.156736 CGGCCAAGTACCAAGAACAG 58.843 55.000 2.24 0.00 0.00 3.16
2285 2714 7.219484 ACATACTTGATTTGGGAGAAAACAG 57.781 36.000 0.00 0.00 0.00 3.16
2301 2730 7.094592 GGAGAAAACAGTTTAGAGGGAAATCTG 60.095 40.741 0.00 0.00 0.00 2.90
2342 2771 1.002033 CAACTGCAGACAACTCCAAGC 60.002 52.381 23.35 0.00 0.00 4.01
2356 2785 4.362677 ACTCCAAGCCCTTAAGATAGACA 58.637 43.478 3.36 0.00 0.00 3.41
2388 2817 2.490115 CACTGGTGTCCTCTCTGACTAC 59.510 54.545 0.00 0.00 36.21 2.73
2394 2823 0.680280 TCCTCTCTGACTACGTGGGC 60.680 60.000 3.26 0.00 0.00 5.36
2397 2826 1.478510 CTCTCTGACTACGTGGGCAAT 59.521 52.381 9.40 0.00 0.00 3.56
2403 2832 0.249398 ACTACGTGGGCAATCTCACC 59.751 55.000 3.26 0.00 0.00 4.02
2452 2881 7.891498 ACTAACAACAAGTTAAAAGGTGGAT 57.109 32.000 0.00 0.00 41.89 3.41
2485 2914 8.348285 AGCAATTTCAAACATAAGTAGCCTTA 57.652 30.769 0.00 0.00 37.56 2.69
2489 2918 8.630054 ATTTCAAACATAAGTAGCCTTACACA 57.370 30.769 0.00 0.00 36.03 3.72
2561 2997 5.776744 AGCACTGTTGAAAAATCTTGGATC 58.223 37.500 0.00 0.00 0.00 3.36
2566 3002 6.206634 ACTGTTGAAAAATCTTGGATCGCTTA 59.793 34.615 0.00 0.00 0.00 3.09
2573 3009 7.872113 AAAATCTTGGATCGCTTAATCTCTT 57.128 32.000 0.00 0.00 0.00 2.85
2620 3056 0.609662 AACACAAATGGGCATGCTCC 59.390 50.000 16.70 16.23 0.00 4.70
2984 3422 3.081804 GCCCACTAGAAAAGCTAAGCAA 58.918 45.455 0.00 0.00 0.00 3.91
3021 3459 7.487822 AGACCTCTCATTTAACAATCTCTCA 57.512 36.000 0.00 0.00 0.00 3.27
3141 3582 3.985279 TCTCAAACCTCACGTTACAATCG 59.015 43.478 0.00 0.00 33.05 3.34
3199 3640 4.141959 GCCTAGAATTTTTGCCATGCCTTA 60.142 41.667 0.00 0.00 0.00 2.69
3262 3703 3.838317 ACTCCCAACACTCACATTAGCTA 59.162 43.478 0.00 0.00 0.00 3.32
3265 3706 6.156256 ACTCCCAACACTCACATTAGCTATTA 59.844 38.462 0.00 0.00 0.00 0.98
3311 3752 5.191124 ACCTATGGTTCGGAAAGAAACCTAT 59.809 40.000 5.91 1.63 45.80 2.57
3342 3783 2.262211 GACAAAGATTTTGCCGATGCC 58.738 47.619 1.68 0.00 36.33 4.40
3349 3790 0.393132 TTTTGCCGATGCCACCGATA 60.393 50.000 0.00 0.00 36.33 2.92
3362 3803 2.481969 CCACCGATATCATAGGCCATCG 60.482 54.545 5.01 9.88 39.88 3.84
3414 3855 4.083271 GCCACCAATAGTTTCAGTGAAGAC 60.083 45.833 5.56 7.69 0.00 3.01
3418 3859 5.531287 ACCAATAGTTTCAGTGAAGACAACC 59.469 40.000 5.56 0.00 0.00 3.77
3492 3933 5.181622 CGGTTTGGTGGTTGCTATAAAAGTA 59.818 40.000 0.00 0.00 0.00 2.24
3498 3939 7.172342 TGGTGGTTGCTATAAAAGTACTTGAT 58.828 34.615 9.34 8.55 0.00 2.57
3510 3951 4.065321 AGTACTTGATATGCAGCTGGAC 57.935 45.455 17.12 1.06 0.00 4.02
3543 3984 5.277974 CCAAAGTTTCGATGTTGAGTGTCAT 60.278 40.000 0.00 0.00 0.00 3.06
3603 4044 7.851228 AGATACTCAACACATGTTCCAATCTA 58.149 34.615 0.00 0.00 35.83 1.98
3622 4063 7.264221 CAATCTAGATTTCAGAGCACTAGTGT 58.736 38.462 23.44 10.82 34.20 3.55
3667 4108 0.105778 GGAGATGCTCCTACACCAGC 59.894 60.000 6.23 0.00 46.41 4.85
3669 4110 0.618680 AGATGCTCCTACACCAGCCA 60.619 55.000 0.00 0.00 34.47 4.75
3682 4123 1.072331 ACCAGCCAAAGAGTACAGTGG 59.928 52.381 0.00 0.00 0.00 4.00
3684 4125 2.026822 CCAGCCAAAGAGTACAGTGGAT 60.027 50.000 7.97 0.00 32.54 3.41
3707 4148 6.935240 TTTGGGATTTCTTGAGAGACTAGA 57.065 37.500 0.00 0.00 0.00 2.43
3717 4158 5.655974 TCTTGAGAGACTAGACATCATGCTT 59.344 40.000 0.00 0.00 0.00 3.91
4141 4588 0.105194 TCACTGGAAGGAGACCCACA 60.105 55.000 0.00 0.00 39.30 4.17
4550 5006 5.758296 GGATGTGTTAATGTGTATGACCGAT 59.242 40.000 0.00 0.00 0.00 4.18
4573 5029 9.165014 CGATTTAAAATTGTATTGGGATGTACG 57.835 33.333 0.00 0.00 0.00 3.67
4629 5085 8.165239 TCGCCAAGTATTAAATTGATAATGCT 57.835 30.769 1.24 0.00 39.09 3.79
4696 5152 7.737972 TTTAATCATGTTTTTCGTCTCTCCA 57.262 32.000 0.00 0.00 0.00 3.86
4747 5203 4.007659 CCTTTCCATTTACTAACAGCCGT 58.992 43.478 0.00 0.00 0.00 5.68
4813 5269 4.560136 TCTCTATTTCTAGCTGCAGACG 57.440 45.455 20.43 4.31 0.00 4.18
4872 5352 5.182760 AGAAACCAAGATTGATTCAGACAGC 59.817 40.000 11.22 0.00 0.00 4.40
4873 5353 4.025040 ACCAAGATTGATTCAGACAGCA 57.975 40.909 0.00 0.00 0.00 4.41
5030 5514 8.959676 TTTTTAGGGGTATCACCAAGTTTTAT 57.040 30.769 0.00 0.00 41.02 1.40
5031 5515 8.959676 TTTTAGGGGTATCACCAAGTTTTATT 57.040 30.769 0.00 0.00 41.02 1.40
5032 5516 7.948034 TTAGGGGTATCACCAAGTTTTATTG 57.052 36.000 0.00 0.00 41.02 1.90
5033 5517 6.147437 AGGGGTATCACCAAGTTTTATTGA 57.853 37.500 0.00 0.00 41.02 2.57
5034 5518 6.741724 AGGGGTATCACCAAGTTTTATTGAT 58.258 36.000 0.00 0.00 41.02 2.57
5035 5519 6.833933 AGGGGTATCACCAAGTTTTATTGATC 59.166 38.462 0.00 0.00 41.02 2.92
5036 5520 6.605594 GGGGTATCACCAAGTTTTATTGATCA 59.394 38.462 0.00 0.00 41.02 2.92
5037 5521 7.123547 GGGGTATCACCAAGTTTTATTGATCAA 59.876 37.037 11.26 11.26 41.02 2.57
5038 5522 8.527810 GGGTATCACCAAGTTTTATTGATCAAA 58.472 33.333 13.09 0.00 41.02 2.69
5039 5523 9.353999 GGTATCACCAAGTTTTATTGATCAAAC 57.646 33.333 13.09 6.05 38.42 2.93
5042 5526 7.657336 TCACCAAGTTTTATTGATCAAACTCC 58.343 34.615 13.09 0.08 41.42 3.85
5043 5527 7.286546 TCACCAAGTTTTATTGATCAAACTCCA 59.713 33.333 13.09 0.00 41.42 3.86
5044 5528 7.382218 CACCAAGTTTTATTGATCAAACTCCAC 59.618 37.037 13.09 6.18 41.42 4.02
5045 5529 7.069331 ACCAAGTTTTATTGATCAAACTCCACA 59.931 33.333 13.09 0.00 41.42 4.17
5046 5530 8.090214 CCAAGTTTTATTGATCAAACTCCACAT 58.910 33.333 13.09 0.00 41.42 3.21
5047 5531 8.918658 CAAGTTTTATTGATCAAACTCCACATG 58.081 33.333 13.09 5.76 41.42 3.21
5048 5532 7.605449 AGTTTTATTGATCAAACTCCACATGG 58.395 34.615 13.09 0.00 38.59 3.66
5049 5533 7.451255 AGTTTTATTGATCAAACTCCACATGGA 59.549 33.333 13.09 0.00 38.59 3.41
5060 5544 3.252979 CACATGGAGTGGCATCACA 57.747 52.632 0.00 0.00 45.91 3.58
5061 5545 1.536940 CACATGGAGTGGCATCACAA 58.463 50.000 0.00 0.00 45.91 3.33
5062 5546 2.097036 CACATGGAGTGGCATCACAAT 58.903 47.619 0.00 0.00 45.91 2.71
5063 5547 2.098607 CACATGGAGTGGCATCACAATC 59.901 50.000 0.00 0.00 45.91 2.67
5064 5548 1.332686 CATGGAGTGGCATCACAATCG 59.667 52.381 0.00 0.00 45.91 3.34
5065 5549 0.392863 TGGAGTGGCATCACAATCGG 60.393 55.000 0.00 0.00 45.91 4.18
5066 5550 0.107703 GGAGTGGCATCACAATCGGA 60.108 55.000 0.00 0.00 45.91 4.55
5067 5551 1.475751 GGAGTGGCATCACAATCGGAT 60.476 52.381 0.00 0.00 45.91 4.18
5068 5552 1.869767 GAGTGGCATCACAATCGGATC 59.130 52.381 0.00 0.00 45.91 3.36
5069 5553 1.210234 AGTGGCATCACAATCGGATCA 59.790 47.619 0.00 0.00 45.91 2.92
5070 5554 2.158711 AGTGGCATCACAATCGGATCAT 60.159 45.455 0.00 0.00 45.91 2.45
5071 5555 2.031420 GTGGCATCACAATCGGATCATG 60.031 50.000 0.00 0.00 43.13 3.07
5072 5556 1.538512 GGCATCACAATCGGATCATGG 59.461 52.381 0.00 0.00 0.00 3.66
5073 5557 1.538512 GCATCACAATCGGATCATGGG 59.461 52.381 0.00 0.00 0.00 4.00
5074 5558 2.156917 CATCACAATCGGATCATGGGG 58.843 52.381 0.00 0.00 0.00 4.96
5075 5559 1.212375 TCACAATCGGATCATGGGGT 58.788 50.000 0.00 0.00 0.00 4.95
5076 5560 1.563879 TCACAATCGGATCATGGGGTT 59.436 47.619 0.00 0.00 0.00 4.11
5077 5561 1.677576 CACAATCGGATCATGGGGTTG 59.322 52.381 0.00 0.00 0.00 3.77
5078 5562 0.670162 CAATCGGATCATGGGGTTGC 59.330 55.000 0.00 0.00 0.00 4.17
5079 5563 0.258484 AATCGGATCATGGGGTTGCA 59.742 50.000 0.00 0.00 0.00 4.08
5080 5564 0.479815 ATCGGATCATGGGGTTGCAT 59.520 50.000 0.00 0.00 0.00 3.96
5081 5565 0.179020 TCGGATCATGGGGTTGCATC 60.179 55.000 0.00 0.00 0.00 3.91
5082 5566 0.466007 CGGATCATGGGGTTGCATCA 60.466 55.000 0.00 0.00 0.00 3.07
5083 5567 1.779221 GGATCATGGGGTTGCATCAA 58.221 50.000 0.00 0.00 0.00 2.57
5084 5568 1.410153 GGATCATGGGGTTGCATCAAC 59.590 52.381 0.00 1.33 42.89 3.18
5085 5569 1.066002 GATCATGGGGTTGCATCAACG 59.934 52.381 0.00 0.00 44.36 4.10
5086 5570 0.037447 TCATGGGGTTGCATCAACGA 59.963 50.000 0.00 0.00 44.36 3.85
5087 5571 0.887247 CATGGGGTTGCATCAACGAA 59.113 50.000 0.00 0.00 44.36 3.85
5088 5572 1.271934 CATGGGGTTGCATCAACGAAA 59.728 47.619 0.00 0.00 44.36 3.46
5089 5573 0.671251 TGGGGTTGCATCAACGAAAC 59.329 50.000 0.00 0.00 44.36 2.78
5090 5574 0.671251 GGGGTTGCATCAACGAAACA 59.329 50.000 0.00 0.00 44.36 2.83
5091 5575 1.272212 GGGGTTGCATCAACGAAACAT 59.728 47.619 0.00 0.00 44.36 2.71
5092 5576 2.327568 GGGTTGCATCAACGAAACATG 58.672 47.619 0.00 0.00 44.36 3.21
5093 5577 2.288152 GGGTTGCATCAACGAAACATGT 60.288 45.455 0.00 0.00 44.36 3.21
5094 5578 2.979813 GGTTGCATCAACGAAACATGTC 59.020 45.455 0.00 0.00 44.36 3.06
5095 5579 3.304659 GGTTGCATCAACGAAACATGTCT 60.305 43.478 0.00 0.00 44.36 3.41
5096 5580 3.811722 TGCATCAACGAAACATGTCTC 57.188 42.857 0.00 0.00 0.00 3.36
5097 5581 2.483877 TGCATCAACGAAACATGTCTCC 59.516 45.455 0.00 0.00 0.00 3.71
5098 5582 2.159517 GCATCAACGAAACATGTCTCCC 60.160 50.000 0.00 0.00 0.00 4.30
5099 5583 2.178912 TCAACGAAACATGTCTCCCC 57.821 50.000 0.00 0.00 0.00 4.81
5100 5584 1.697432 TCAACGAAACATGTCTCCCCT 59.303 47.619 0.00 0.00 0.00 4.79
5101 5585 1.806542 CAACGAAACATGTCTCCCCTG 59.193 52.381 0.00 0.00 0.00 4.45
5102 5586 1.348064 ACGAAACATGTCTCCCCTGA 58.652 50.000 0.00 0.00 0.00 3.86
5103 5587 1.909302 ACGAAACATGTCTCCCCTGAT 59.091 47.619 0.00 0.00 0.00 2.90
5104 5588 2.093447 ACGAAACATGTCTCCCCTGATC 60.093 50.000 0.00 0.00 0.00 2.92
5105 5589 2.169352 CGAAACATGTCTCCCCTGATCT 59.831 50.000 0.00 0.00 0.00 2.75
5106 5590 3.384789 CGAAACATGTCTCCCCTGATCTA 59.615 47.826 0.00 0.00 0.00 1.98
5107 5591 4.500545 CGAAACATGTCTCCCCTGATCTAG 60.501 50.000 0.00 0.00 0.00 2.43
5108 5592 3.981516 ACATGTCTCCCCTGATCTAGA 57.018 47.619 0.00 0.00 0.00 2.43
5109 5593 3.843422 ACATGTCTCCCCTGATCTAGAG 58.157 50.000 0.00 0.00 0.00 2.43
5110 5594 3.465210 ACATGTCTCCCCTGATCTAGAGA 59.535 47.826 0.00 0.00 33.07 3.10
5111 5595 4.078922 ACATGTCTCCCCTGATCTAGAGAA 60.079 45.833 0.00 0.00 37.14 2.87
5112 5596 4.823364 TGTCTCCCCTGATCTAGAGAAT 57.177 45.455 0.00 0.00 37.14 2.40
5113 5597 5.149584 TGTCTCCCCTGATCTAGAGAATT 57.850 43.478 0.00 0.00 37.14 2.17
5114 5598 5.533112 TGTCTCCCCTGATCTAGAGAATTT 58.467 41.667 0.00 0.00 37.14 1.82
5115 5599 5.365025 TGTCTCCCCTGATCTAGAGAATTTG 59.635 44.000 0.00 0.00 37.14 2.32
5116 5600 5.600484 GTCTCCCCTGATCTAGAGAATTTGA 59.400 44.000 0.00 0.00 37.14 2.69
5117 5601 6.269769 GTCTCCCCTGATCTAGAGAATTTGAT 59.730 42.308 0.00 0.00 37.14 2.57
5118 5602 7.453126 GTCTCCCCTGATCTAGAGAATTTGATA 59.547 40.741 0.00 0.00 37.14 2.15
5119 5603 8.013072 TCTCCCCTGATCTAGAGAATTTGATAA 58.987 37.037 0.00 0.00 32.58 1.75
5120 5604 7.967908 TCCCCTGATCTAGAGAATTTGATAAC 58.032 38.462 0.00 0.00 0.00 1.89
5121 5605 7.791766 TCCCCTGATCTAGAGAATTTGATAACT 59.208 37.037 0.00 0.00 0.00 2.24
5122 5606 8.435982 CCCCTGATCTAGAGAATTTGATAACTT 58.564 37.037 0.00 0.00 0.00 2.66
5123 5607 9.270640 CCCTGATCTAGAGAATTTGATAACTTG 57.729 37.037 0.00 0.00 0.00 3.16
5124 5608 9.270640 CCTGATCTAGAGAATTTGATAACTTGG 57.729 37.037 0.00 0.00 0.00 3.61
5125 5609 8.668510 TGATCTAGAGAATTTGATAACTTGGC 57.331 34.615 0.00 0.00 0.00 4.52
5126 5610 8.489489 TGATCTAGAGAATTTGATAACTTGGCT 58.511 33.333 0.00 0.00 0.00 4.75
5127 5611 9.988815 GATCTAGAGAATTTGATAACTTGGCTA 57.011 33.333 0.00 0.00 0.00 3.93
5129 5613 9.601217 TCTAGAGAATTTGATAACTTGGCTAAC 57.399 33.333 0.00 0.00 0.00 2.34
5130 5614 7.631717 AGAGAATTTGATAACTTGGCTAACC 57.368 36.000 0.00 0.00 0.00 2.85
5131 5615 7.406104 AGAGAATTTGATAACTTGGCTAACCT 58.594 34.615 0.00 0.00 36.63 3.50
5132 5616 8.548877 AGAGAATTTGATAACTTGGCTAACCTA 58.451 33.333 0.00 0.00 36.63 3.08
5133 5617 9.343539 GAGAATTTGATAACTTGGCTAACCTAT 57.656 33.333 0.00 0.00 36.63 2.57
5134 5618 9.343539 AGAATTTGATAACTTGGCTAACCTATC 57.656 33.333 0.00 0.00 36.63 2.08
5135 5619 7.730364 ATTTGATAACTTGGCTAACCTATCG 57.270 36.000 0.00 0.00 36.63 2.92
5136 5620 5.209818 TGATAACTTGGCTAACCTATCGG 57.790 43.478 0.00 0.00 36.63 4.18
5137 5621 2.327200 AACTTGGCTAACCTATCGGC 57.673 50.000 0.00 0.00 36.63 5.54
5138 5622 0.104304 ACTTGGCTAACCTATCGGCG 59.896 55.000 0.00 0.00 36.63 6.46
5139 5623 0.104304 CTTGGCTAACCTATCGGCGT 59.896 55.000 6.85 0.00 36.63 5.68
5140 5624 0.103572 TTGGCTAACCTATCGGCGTC 59.896 55.000 6.85 0.00 36.63 5.19
5141 5625 1.371389 GGCTAACCTATCGGCGTCG 60.371 63.158 1.15 1.15 37.82 5.12
5142 5626 2.015090 GCTAACCTATCGGCGTCGC 61.015 63.158 9.22 9.22 36.13 5.19
5143 5627 1.724929 CTAACCTATCGGCGTCGCG 60.725 63.158 11.75 0.00 36.13 5.87
5144 5628 3.185082 TAACCTATCGGCGTCGCGG 62.185 63.158 17.81 17.81 36.13 6.46
5146 5630 4.564116 CCTATCGGCGTCGCGGTT 62.564 66.667 22.08 16.99 36.13 4.44
5147 5631 3.320078 CTATCGGCGTCGCGGTTG 61.320 66.667 22.08 11.07 36.13 3.77
5148 5632 3.744749 CTATCGGCGTCGCGGTTGA 62.745 63.158 22.08 12.53 36.13 3.18
5160 5644 4.699522 GGTTGACCGCTCGGCCTT 62.700 66.667 8.41 0.00 39.32 4.35
5161 5645 3.119096 GTTGACCGCTCGGCCTTC 61.119 66.667 8.41 0.00 39.32 3.46
5162 5646 4.735132 TTGACCGCTCGGCCTTCG 62.735 66.667 8.41 0.62 39.32 3.79
5174 5658 4.413495 TCGGCCTTCGAAAGTAAAATTG 57.587 40.909 0.00 0.00 45.86 2.32
5175 5659 2.914838 CGGCCTTCGAAAGTAAAATTGC 59.085 45.455 0.00 0.00 42.43 3.56
5176 5660 3.610585 CGGCCTTCGAAAGTAAAATTGCA 60.611 43.478 0.00 0.00 42.43 4.08
5177 5661 4.303282 GGCCTTCGAAAGTAAAATTGCAA 58.697 39.130 0.00 0.00 0.00 4.08
5178 5662 4.929211 GGCCTTCGAAAGTAAAATTGCAAT 59.071 37.500 5.99 5.99 0.00 3.56
5179 5663 5.408299 GGCCTTCGAAAGTAAAATTGCAATT 59.592 36.000 18.99 18.99 0.00 2.32
5180 5664 6.588373 GGCCTTCGAAAGTAAAATTGCAATTA 59.412 34.615 24.35 7.82 0.00 1.40
5181 5665 7.117092 GGCCTTCGAAAGTAAAATTGCAATTAA 59.883 33.333 24.35 13.27 0.00 1.40
5182 5666 8.491950 GCCTTCGAAAGTAAAATTGCAATTAAA 58.508 29.630 24.35 12.92 0.00 1.52
5222 5706 5.740290 TTTATCTCCGATAAGATGGTCCC 57.260 43.478 5.50 0.00 36.66 4.46
5223 5707 1.617322 TCTCCGATAAGATGGTCCCG 58.383 55.000 0.00 0.00 0.00 5.14
5224 5708 1.133575 TCTCCGATAAGATGGTCCCGT 60.134 52.381 0.00 0.00 0.00 5.28
5225 5709 2.107031 TCTCCGATAAGATGGTCCCGTA 59.893 50.000 0.00 0.00 0.00 4.02
5226 5710 2.228343 CTCCGATAAGATGGTCCCGTAC 59.772 54.545 0.00 0.00 0.00 3.67
5227 5711 1.958579 CCGATAAGATGGTCCCGTACA 59.041 52.381 0.00 0.00 0.00 2.90
5228 5712 2.288030 CCGATAAGATGGTCCCGTACAC 60.288 54.545 0.00 0.00 0.00 2.90
5229 5713 2.359848 CGATAAGATGGTCCCGTACACA 59.640 50.000 0.00 0.00 0.00 3.72
5230 5714 3.714391 GATAAGATGGTCCCGTACACAC 58.286 50.000 0.00 0.00 0.00 3.82
5231 5715 0.611714 AAGATGGTCCCGTACACACC 59.388 55.000 0.00 0.00 0.00 4.16
5232 5716 0.543410 AGATGGTCCCGTACACACCA 60.543 55.000 9.40 9.40 44.36 4.17
5233 5717 2.691663 ATGGTCCCGTACACACCAT 58.308 52.632 12.54 12.54 44.18 3.55
5234 5718 0.988832 ATGGTCCCGTACACACCATT 59.011 50.000 12.54 1.33 46.85 3.16
5235 5719 0.035598 TGGTCCCGTACACACCATTG 59.964 55.000 3.90 0.00 35.16 2.82
5236 5720 0.675522 GGTCCCGTACACACCATTGG 60.676 60.000 0.00 0.00 0.00 3.16
5237 5721 0.322322 GTCCCGTACACACCATTGGA 59.678 55.000 10.37 0.00 0.00 3.53
5238 5722 0.611200 TCCCGTACACACCATTGGAG 59.389 55.000 10.37 3.76 0.00 3.86
5239 5723 1.024579 CCCGTACACACCATTGGAGC 61.025 60.000 10.37 0.00 0.00 4.70
5240 5724 1.024579 CCGTACACACCATTGGAGCC 61.025 60.000 10.37 0.00 0.00 4.70
5241 5725 1.358725 CGTACACACCATTGGAGCCG 61.359 60.000 10.37 0.00 0.00 5.52
5242 5726 1.376683 TACACACCATTGGAGCCGC 60.377 57.895 10.37 0.00 0.00 6.53
5243 5727 1.836999 TACACACCATTGGAGCCGCT 61.837 55.000 10.37 0.00 0.00 5.52
5244 5728 2.360350 ACACCATTGGAGCCGCTG 60.360 61.111 10.37 0.00 0.00 5.18
5245 5729 2.360350 CACCATTGGAGCCGCTGT 60.360 61.111 10.37 0.00 0.00 4.40
5246 5730 1.973281 CACCATTGGAGCCGCTGTT 60.973 57.895 10.37 0.00 0.00 3.16
5247 5731 1.973281 ACCATTGGAGCCGCTGTTG 60.973 57.895 10.37 0.00 0.00 3.33
5248 5732 1.675310 CCATTGGAGCCGCTGTTGA 60.675 57.895 0.00 0.00 0.00 3.18
5249 5733 1.033746 CCATTGGAGCCGCTGTTGAT 61.034 55.000 0.00 0.00 0.00 2.57
5250 5734 0.379669 CATTGGAGCCGCTGTTGATC 59.620 55.000 0.00 0.00 0.00 2.92
5251 5735 0.254178 ATTGGAGCCGCTGTTGATCT 59.746 50.000 0.00 0.00 0.00 2.75
5252 5736 0.391661 TTGGAGCCGCTGTTGATCTC 60.392 55.000 0.00 0.00 0.00 2.75
5253 5737 1.219124 GGAGCCGCTGTTGATCTCA 59.781 57.895 0.00 0.00 0.00 3.27
5254 5738 1.086634 GGAGCCGCTGTTGATCTCAC 61.087 60.000 0.00 0.00 0.00 3.51
5255 5739 1.078848 AGCCGCTGTTGATCTCACC 60.079 57.895 0.00 0.00 0.00 4.02
5256 5740 2.109126 GCCGCTGTTGATCTCACCC 61.109 63.158 0.00 0.00 0.00 4.61
5257 5741 1.296392 CCGCTGTTGATCTCACCCA 59.704 57.895 0.00 0.00 0.00 4.51
5258 5742 1.021390 CCGCTGTTGATCTCACCCAC 61.021 60.000 0.00 0.00 0.00 4.61
5259 5743 0.320683 CGCTGTTGATCTCACCCACA 60.321 55.000 0.00 0.00 0.00 4.17
5260 5744 1.877680 CGCTGTTGATCTCACCCACAA 60.878 52.381 0.00 0.00 0.00 3.33
5261 5745 1.537202 GCTGTTGATCTCACCCACAAC 59.463 52.381 0.00 0.00 41.64 3.32
5262 5746 2.154462 CTGTTGATCTCACCCACAACC 58.846 52.381 0.00 0.00 40.91 3.77
5263 5747 1.774254 TGTTGATCTCACCCACAACCT 59.226 47.619 0.00 0.00 40.91 3.50
5264 5748 2.154462 GTTGATCTCACCCACAACCTG 58.846 52.381 0.00 0.00 37.30 4.00
5265 5749 0.036732 TGATCTCACCCACAACCTGC 59.963 55.000 0.00 0.00 0.00 4.85
5266 5750 0.326264 GATCTCACCCACAACCTGCT 59.674 55.000 0.00 0.00 0.00 4.24
5267 5751 0.773644 ATCTCACCCACAACCTGCTT 59.226 50.000 0.00 0.00 0.00 3.91
5268 5752 0.108585 TCTCACCCACAACCTGCTTC 59.891 55.000 0.00 0.00 0.00 3.86
5269 5753 1.227823 TCACCCACAACCTGCTTCG 60.228 57.895 0.00 0.00 0.00 3.79
5270 5754 1.227823 CACCCACAACCTGCTTCGA 60.228 57.895 0.00 0.00 0.00 3.71
5271 5755 1.071471 ACCCACAACCTGCTTCGAG 59.929 57.895 0.00 0.00 0.00 4.04
5272 5756 1.071471 CCCACAACCTGCTTCGAGT 59.929 57.895 0.00 0.00 0.00 4.18
5273 5757 0.951040 CCCACAACCTGCTTCGAGTC 60.951 60.000 0.00 0.00 0.00 3.36
5274 5758 0.249868 CCACAACCTGCTTCGAGTCA 60.250 55.000 0.00 0.00 0.00 3.41
5275 5759 1.143305 CACAACCTGCTTCGAGTCAG 58.857 55.000 8.51 8.51 0.00 3.51
5276 5760 1.040646 ACAACCTGCTTCGAGTCAGA 58.959 50.000 15.02 0.00 32.26 3.27
5277 5761 1.269831 ACAACCTGCTTCGAGTCAGAC 60.270 52.381 15.02 0.00 32.26 3.51
5278 5762 0.039074 AACCTGCTTCGAGTCAGACG 60.039 55.000 15.02 4.78 32.26 4.18
5279 5763 1.803519 CCTGCTTCGAGTCAGACGC 60.804 63.158 15.02 0.00 36.16 5.19
5280 5764 1.803519 CTGCTTCGAGTCAGACGCC 60.804 63.158 9.58 0.00 34.92 5.68
5281 5765 2.258591 GCTTCGAGTCAGACGCCA 59.741 61.111 0.00 0.00 30.33 5.69
5282 5766 2.089349 GCTTCGAGTCAGACGCCAC 61.089 63.158 0.00 0.00 30.33 5.01
5283 5767 1.285950 CTTCGAGTCAGACGCCACA 59.714 57.895 0.00 0.00 0.00 4.17
5284 5768 0.318699 CTTCGAGTCAGACGCCACAA 60.319 55.000 0.00 0.00 0.00 3.33
5285 5769 0.596600 TTCGAGTCAGACGCCACAAC 60.597 55.000 0.00 0.00 0.00 3.32
5286 5770 2.365068 CGAGTCAGACGCCACAACG 61.365 63.158 0.00 0.00 39.50 4.10
5287 5771 1.007734 GAGTCAGACGCCACAACGA 60.008 57.895 0.00 0.00 36.70 3.85
5288 5772 0.596600 GAGTCAGACGCCACAACGAA 60.597 55.000 0.00 0.00 36.70 3.85
5289 5773 0.597637 AGTCAGACGCCACAACGAAG 60.598 55.000 0.00 0.00 36.70 3.79
5307 5791 6.092955 ACGAAGTTCTGTAACATTAGGTCA 57.907 37.500 0.56 0.00 37.78 4.02
5308 5792 6.698380 ACGAAGTTCTGTAACATTAGGTCAT 58.302 36.000 0.56 0.00 37.78 3.06
5309 5793 6.812160 ACGAAGTTCTGTAACATTAGGTCATC 59.188 38.462 0.56 0.00 37.78 2.92
5310 5794 7.036220 CGAAGTTCTGTAACATTAGGTCATCT 58.964 38.462 0.56 0.00 38.12 2.90
5311 5795 7.009631 CGAAGTTCTGTAACATTAGGTCATCTG 59.990 40.741 0.56 0.00 38.12 2.90
5312 5796 6.109359 AGTTCTGTAACATTAGGTCATCTGC 58.891 40.000 0.00 0.00 38.12 4.26
5313 5797 5.939764 TCTGTAACATTAGGTCATCTGCT 57.060 39.130 0.00 0.00 0.00 4.24
5314 5798 7.124298 AGTTCTGTAACATTAGGTCATCTGCTA 59.876 37.037 0.00 0.00 38.12 3.49
5315 5799 7.418337 TCTGTAACATTAGGTCATCTGCTAA 57.582 36.000 0.00 0.00 0.00 3.09
5316 5800 7.492524 TCTGTAACATTAGGTCATCTGCTAAG 58.507 38.462 0.00 0.00 0.00 2.18
5317 5801 6.582636 TGTAACATTAGGTCATCTGCTAAGG 58.417 40.000 0.00 0.00 0.00 2.69
5318 5802 5.957771 AACATTAGGTCATCTGCTAAGGA 57.042 39.130 0.00 0.00 0.00 3.36
5319 5803 5.543507 ACATTAGGTCATCTGCTAAGGAG 57.456 43.478 0.00 0.00 0.00 3.69
5320 5804 5.211973 ACATTAGGTCATCTGCTAAGGAGA 58.788 41.667 0.00 0.00 0.00 3.71
5321 5805 5.304101 ACATTAGGTCATCTGCTAAGGAGAG 59.696 44.000 0.00 0.00 0.00 3.20
5322 5806 3.678965 AGGTCATCTGCTAAGGAGAGA 57.321 47.619 0.00 0.00 0.00 3.10
5323 5807 3.565307 AGGTCATCTGCTAAGGAGAGAG 58.435 50.000 0.00 0.00 0.00 3.20
5324 5808 2.035832 GGTCATCTGCTAAGGAGAGAGC 59.964 54.545 0.00 0.00 39.25 4.09
5325 5809 2.035832 GTCATCTGCTAAGGAGAGAGCC 59.964 54.545 0.00 0.00 37.94 4.70
5326 5810 2.091389 TCATCTGCTAAGGAGAGAGCCT 60.091 50.000 0.00 0.00 40.93 4.58
5327 5811 2.065899 TCTGCTAAGGAGAGAGCCTC 57.934 55.000 0.00 0.00 37.26 4.70
5334 5818 3.219224 GAGAGAGCCTCCCTGCAG 58.781 66.667 6.78 6.78 35.87 4.41
5335 5819 2.365370 AGAGAGCCTCCCTGCAGG 60.365 66.667 26.87 26.87 36.50 4.85
5346 5830 3.393472 CCTGCAGGGAGTCAATAGC 57.607 57.895 26.14 0.00 37.23 2.97
5347 5831 0.835941 CCTGCAGGGAGTCAATAGCT 59.164 55.000 26.14 0.00 37.23 3.32
5348 5832 1.211457 CCTGCAGGGAGTCAATAGCTT 59.789 52.381 26.14 0.00 37.23 3.74
5349 5833 2.559440 CTGCAGGGAGTCAATAGCTTC 58.441 52.381 5.57 0.00 0.00 3.86
5350 5834 1.210478 TGCAGGGAGTCAATAGCTTCC 59.790 52.381 0.00 0.00 31.65 3.46
5351 5835 1.210478 GCAGGGAGTCAATAGCTTCCA 59.790 52.381 0.00 0.00 34.00 3.53
5352 5836 2.158696 GCAGGGAGTCAATAGCTTCCAT 60.159 50.000 0.00 0.00 34.00 3.41
5353 5837 3.071602 GCAGGGAGTCAATAGCTTCCATA 59.928 47.826 0.00 0.00 34.00 2.74
5354 5838 4.802248 GCAGGGAGTCAATAGCTTCCATAG 60.802 50.000 0.00 0.00 34.00 2.23
5355 5839 4.346418 CAGGGAGTCAATAGCTTCCATAGT 59.654 45.833 0.00 0.00 34.00 2.12
5356 5840 4.971924 AGGGAGTCAATAGCTTCCATAGTT 59.028 41.667 0.00 0.00 34.00 2.24
5357 5841 5.059833 GGGAGTCAATAGCTTCCATAGTTG 58.940 45.833 0.00 0.00 31.84 3.16
5358 5842 4.513318 GGAGTCAATAGCTTCCATAGTTGC 59.487 45.833 0.00 0.00 0.00 4.17
5359 5843 5.102953 AGTCAATAGCTTCCATAGTTGCA 57.897 39.130 0.00 0.00 0.00 4.08
5360 5844 5.121811 AGTCAATAGCTTCCATAGTTGCAG 58.878 41.667 0.00 0.00 0.00 4.41
5361 5845 3.879295 TCAATAGCTTCCATAGTTGCAGC 59.121 43.478 0.00 0.00 0.00 5.25
5362 5846 3.565764 ATAGCTTCCATAGTTGCAGCA 57.434 42.857 2.55 0.00 32.61 4.41
5363 5847 2.431954 AGCTTCCATAGTTGCAGCAT 57.568 45.000 2.55 0.00 32.61 3.79
5364 5848 2.731572 AGCTTCCATAGTTGCAGCATT 58.268 42.857 2.55 0.00 32.61 3.56
5365 5849 2.426024 AGCTTCCATAGTTGCAGCATTG 59.574 45.455 2.55 0.00 32.61 2.82
5374 5858 3.194719 GCAGCATTGCTCACTCCC 58.805 61.111 8.54 0.00 46.95 4.30
5375 5859 1.378250 GCAGCATTGCTCACTCCCT 60.378 57.895 8.54 0.00 46.95 4.20
5376 5860 1.375098 GCAGCATTGCTCACTCCCTC 61.375 60.000 8.54 0.00 46.95 4.30
5377 5861 0.035725 CAGCATTGCTCACTCCCTCA 60.036 55.000 8.54 0.00 36.40 3.86
5378 5862 0.694771 AGCATTGCTCACTCCCTCAA 59.305 50.000 5.03 0.00 30.62 3.02
5379 5863 1.284198 AGCATTGCTCACTCCCTCAAT 59.716 47.619 5.03 0.00 30.62 2.57
5380 5864 2.507058 AGCATTGCTCACTCCCTCAATA 59.493 45.455 5.03 0.00 30.62 1.90
5381 5865 3.054139 AGCATTGCTCACTCCCTCAATAA 60.054 43.478 5.03 0.00 30.62 1.40
5382 5866 3.065925 GCATTGCTCACTCCCTCAATAAC 59.934 47.826 0.16 0.00 0.00 1.89
5383 5867 3.350219 TTGCTCACTCCCTCAATAACC 57.650 47.619 0.00 0.00 0.00 2.85
5384 5868 2.265367 TGCTCACTCCCTCAATAACCA 58.735 47.619 0.00 0.00 0.00 3.67
5385 5869 2.642311 TGCTCACTCCCTCAATAACCAA 59.358 45.455 0.00 0.00 0.00 3.67
5386 5870 3.073798 TGCTCACTCCCTCAATAACCAAA 59.926 43.478 0.00 0.00 0.00 3.28
5387 5871 3.691609 GCTCACTCCCTCAATAACCAAAG 59.308 47.826 0.00 0.00 0.00 2.77
5388 5872 4.565652 GCTCACTCCCTCAATAACCAAAGA 60.566 45.833 0.00 0.00 0.00 2.52
5389 5873 5.165961 TCACTCCCTCAATAACCAAAGAG 57.834 43.478 0.00 0.00 0.00 2.85
5390 5874 4.019321 TCACTCCCTCAATAACCAAAGAGG 60.019 45.833 0.00 0.00 45.68 3.69
5396 5880 5.809719 CTCAATAACCAAAGAGGAGCTTC 57.190 43.478 0.00 0.00 41.22 3.86
5397 5881 4.589908 TCAATAACCAAAGAGGAGCTTCC 58.410 43.478 0.00 0.00 41.22 3.46
5398 5882 4.042809 TCAATAACCAAAGAGGAGCTTCCA 59.957 41.667 5.21 0.00 39.61 3.53
5399 5883 4.657814 ATAACCAAAGAGGAGCTTCCAA 57.342 40.909 5.21 0.00 39.61 3.53
5400 5884 2.278332 ACCAAAGAGGAGCTTCCAAC 57.722 50.000 5.21 0.04 39.61 3.77
5401 5885 1.494721 ACCAAAGAGGAGCTTCCAACA 59.505 47.619 5.21 0.00 39.61 3.33
5402 5886 2.108952 ACCAAAGAGGAGCTTCCAACAT 59.891 45.455 5.21 0.00 39.61 2.71
5403 5887 3.330701 ACCAAAGAGGAGCTTCCAACATA 59.669 43.478 5.21 0.00 39.61 2.29
5404 5888 4.202567 ACCAAAGAGGAGCTTCCAACATAA 60.203 41.667 5.21 0.00 39.61 1.90
5405 5889 4.952335 CCAAAGAGGAGCTTCCAACATAAT 59.048 41.667 5.21 0.00 39.61 1.28
5406 5890 5.420104 CCAAAGAGGAGCTTCCAACATAATT 59.580 40.000 5.21 0.00 39.61 1.40
5407 5891 6.603201 CCAAAGAGGAGCTTCCAACATAATTA 59.397 38.462 5.21 0.00 39.61 1.40
5408 5892 7.415653 CCAAAGAGGAGCTTCCAACATAATTAC 60.416 40.741 5.21 0.00 39.61 1.89
5409 5893 5.685728 AGAGGAGCTTCCAACATAATTACC 58.314 41.667 5.21 0.00 39.61 2.85
5410 5894 4.451900 AGGAGCTTCCAACATAATTACCG 58.548 43.478 5.21 0.00 39.61 4.02
5411 5895 4.080526 AGGAGCTTCCAACATAATTACCGT 60.081 41.667 5.21 0.00 39.61 4.83
5412 5896 4.638865 GGAGCTTCCAACATAATTACCGTT 59.361 41.667 0.00 0.00 36.28 4.44
5413 5897 5.220796 GGAGCTTCCAACATAATTACCGTTC 60.221 44.000 0.00 0.00 36.28 3.95
5414 5898 4.331717 AGCTTCCAACATAATTACCGTTCG 59.668 41.667 0.23 0.00 0.00 3.95
5415 5899 4.584394 CTTCCAACATAATTACCGTTCGC 58.416 43.478 0.23 0.00 0.00 4.70
5416 5900 3.597255 TCCAACATAATTACCGTTCGCA 58.403 40.909 0.23 0.00 0.00 5.10
5417 5901 4.193090 TCCAACATAATTACCGTTCGCAT 58.807 39.130 0.23 0.00 0.00 4.73
5418 5902 4.271533 TCCAACATAATTACCGTTCGCATC 59.728 41.667 0.23 0.00 0.00 3.91
5419 5903 4.272504 CCAACATAATTACCGTTCGCATCT 59.727 41.667 0.23 0.00 0.00 2.90
5420 5904 5.432157 CAACATAATTACCGTTCGCATCTC 58.568 41.667 0.23 0.00 0.00 2.75
5421 5905 4.945246 ACATAATTACCGTTCGCATCTCT 58.055 39.130 0.00 0.00 0.00 3.10
5422 5906 6.080648 ACATAATTACCGTTCGCATCTCTA 57.919 37.500 0.00 0.00 0.00 2.43
5423 5907 5.919141 ACATAATTACCGTTCGCATCTCTAC 59.081 40.000 0.00 0.00 0.00 2.59
5424 5908 4.380841 AATTACCGTTCGCATCTCTACA 57.619 40.909 0.00 0.00 0.00 2.74
5425 5909 2.838386 TACCGTTCGCATCTCTACAC 57.162 50.000 0.00 0.00 0.00 2.90
5426 5910 0.885879 ACCGTTCGCATCTCTACACA 59.114 50.000 0.00 0.00 0.00 3.72
5427 5911 1.269166 CCGTTCGCATCTCTACACAC 58.731 55.000 0.00 0.00 0.00 3.82
5428 5912 1.402325 CCGTTCGCATCTCTACACACA 60.402 52.381 0.00 0.00 0.00 3.72
5429 5913 1.914051 CGTTCGCATCTCTACACACAG 59.086 52.381 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 135 6.509418 TGGAAAAACGAATTTGCTAGCTAT 57.491 33.333 17.23 6.68 32.50 2.97
360 367 0.572590 GACGACTACATGCGACATGC 59.427 55.000 16.43 3.53 46.70 4.06
361 368 0.840103 CGACGACTACATGCGACATG 59.160 55.000 15.34 15.34 0.00 3.21
362 369 0.866061 GCGACGACTACATGCGACAT 60.866 55.000 0.00 0.00 0.00 3.06
363 370 1.513373 GCGACGACTACATGCGACA 60.513 57.895 0.00 0.00 0.00 4.35
364 371 0.027194 TAGCGACGACTACATGCGAC 59.973 55.000 0.00 0.00 0.00 5.19
365 372 0.303796 CTAGCGACGACTACATGCGA 59.696 55.000 0.00 0.00 0.00 5.10
536 546 1.768112 CGTTTTGTTGACCGCCGACT 61.768 55.000 0.00 0.00 0.00 4.18
537 547 1.368374 CGTTTTGTTGACCGCCGAC 60.368 57.895 0.00 0.00 0.00 4.79
1021 1430 2.047061 CAGGAAGATGGGAATACGGGA 58.953 52.381 0.00 0.00 0.00 5.14
1039 1448 3.215151 TGGACGAGAATAGGACTAGCAG 58.785 50.000 0.00 0.00 0.00 4.24
1170 1594 1.274167 GATGTGTCGGTGGTCCAGTTA 59.726 52.381 0.00 0.00 0.00 2.24
1353 1777 1.078426 CCTACCAAGTTCCGCTGGG 60.078 63.158 0.00 0.00 44.25 4.45
1433 1857 2.105766 GCCTCGTAAGGTTTCCTAGGA 58.894 52.381 7.62 7.62 45.34 2.94
1446 1870 2.034104 TAAAGAGCTCGAGCCTCGTA 57.966 50.000 32.94 20.81 43.38 3.43
1462 1886 7.117812 CGAGAGTTGGTTTGAAGCTAGATTAAA 59.882 37.037 0.00 0.00 0.00 1.52
1476 1900 0.106419 TTTGGCCCGAGAGTTGGTTT 60.106 50.000 0.00 0.00 0.00 3.27
1503 1927 1.293924 GCATACGCAGCAACATCTCT 58.706 50.000 0.00 0.00 38.36 3.10
1548 1976 4.320608 TTGGCCACTCAAGTCATTTTTC 57.679 40.909 3.88 0.00 0.00 2.29
1549 1977 4.751767 TTTGGCCACTCAAGTCATTTTT 57.248 36.364 3.88 0.00 0.00 1.94
1582 2010 4.701956 AGAAAGGTGTGTTGTTGAACAG 57.298 40.909 0.00 0.00 42.87 3.16
1665 2093 6.480651 GGTTAAAGACTTCAAGCCTAGATAGC 59.519 42.308 0.00 0.00 0.00 2.97
1673 2101 4.019591 TCCCTAGGTTAAAGACTTCAAGCC 60.020 45.833 8.29 0.00 0.00 4.35
1680 2108 7.182930 AGTTGATTGATCCCTAGGTTAAAGACT 59.817 37.037 8.29 0.00 0.00 3.24
1694 2122 2.172293 AGGCCTGAGAGTTGATTGATCC 59.828 50.000 3.11 0.00 0.00 3.36
1698 2126 3.529533 CACTAGGCCTGAGAGTTGATTG 58.470 50.000 17.99 0.00 0.00 2.67
1752 2180 4.242475 CGTTTCCTGCAAGTAGTATGTCA 58.758 43.478 0.00 0.00 0.00 3.58
1754 2182 4.267349 ACGTTTCCTGCAAGTAGTATGT 57.733 40.909 0.00 0.00 0.00 2.29
1759 2187 4.062991 AGGTTAACGTTTCCTGCAAGTAG 58.937 43.478 19.24 0.00 0.00 2.57
1806 2235 3.869065 CAACATCGGGAGGCTAAAACTA 58.131 45.455 0.00 0.00 0.00 2.24
1821 2250 5.292101 ACTTAGCGAAATAGTCTGCAACATC 59.708 40.000 0.00 0.00 0.00 3.06
1830 2259 6.956299 TTGTTACCACTTAGCGAAATAGTC 57.044 37.500 0.00 0.00 0.00 2.59
1832 2261 9.061610 CAAAATTGTTACCACTTAGCGAAATAG 57.938 33.333 0.00 0.00 0.00 1.73
1843 2272 2.295070 GGCCGACAAAATTGTTACCACT 59.705 45.455 0.00 0.00 42.43 4.00
1875 2304 2.741985 TGGCATGACGCAAGACCG 60.742 61.111 0.00 0.00 45.17 4.79
1878 2307 0.391130 GGTACTGGCATGACGCAAGA 60.391 55.000 0.00 0.00 45.64 3.02
1884 2313 1.279271 ACTTGGAGGTACTGGCATGAC 59.721 52.381 0.00 0.00 41.55 3.06
1914 2343 5.892348 ACATCCATAAAAGAGTTTCCACCT 58.108 37.500 0.00 0.00 0.00 4.00
1977 2406 5.827756 AGGTTATTAAAACCCAAGGAGAGG 58.172 41.667 12.92 0.00 41.18 3.69
1980 2409 8.474831 CCAATAAGGTTATTAAAACCCAAGGAG 58.525 37.037 12.92 3.88 41.18 3.69
2064 2493 2.276740 CCCCCTGTCAGATTGCCC 59.723 66.667 0.00 0.00 0.00 5.36
2112 2541 4.337555 CCTTCAAGATGCAGATACCAAAGG 59.662 45.833 0.00 0.00 0.00 3.11
2115 2544 3.282021 GCCTTCAAGATGCAGATACCAA 58.718 45.455 0.00 0.00 0.00 3.67
2145 2574 6.488006 CGATGGAAGATGGAATTTTACCTGAT 59.512 38.462 0.00 0.00 0.00 2.90
2146 2575 5.822519 CGATGGAAGATGGAATTTTACCTGA 59.177 40.000 0.00 0.00 0.00 3.86
2161 2590 5.943349 TTGGATAAGTTACCGATGGAAGA 57.057 39.130 0.00 0.00 0.00 2.87
2167 2596 8.575649 AAAGACAATTTGGATAAGTTACCGAT 57.424 30.769 0.78 0.00 0.00 4.18
2203 2632 4.780815 TGGCCGAACAATTGATTATCTCT 58.219 39.130 13.59 0.00 0.00 3.10
2206 2635 5.248870 ACTTGGCCGAACAATTGATTATC 57.751 39.130 13.59 4.07 0.00 1.75
2219 2648 0.759959 TGTTCTTGGTACTTGGCCGA 59.240 50.000 0.00 0.00 0.00 5.54
2239 2668 2.145536 CAAAGCTGCATTTTCCCCAAC 58.854 47.619 1.02 0.00 0.00 3.77
2285 2714 6.056090 AGAAGTCCAGATTTCCCTCTAAAC 57.944 41.667 0.00 0.00 0.00 2.01
2301 2730 4.137543 TGGAAAGAGCTGAAAAGAAGTCC 58.862 43.478 0.00 0.00 0.00 3.85
2388 2817 2.438434 GGGGTGAGATTGCCCACG 60.438 66.667 1.82 0.00 46.59 4.94
2394 2823 4.273480 GTGATTAATCGTGGGGTGAGATTG 59.727 45.833 10.80 0.00 36.23 2.67
2397 2826 3.104512 AGTGATTAATCGTGGGGTGAGA 58.895 45.455 10.80 0.00 0.00 3.27
2403 2832 4.621034 GCAACAAAAGTGATTAATCGTGGG 59.379 41.667 10.80 1.41 0.00 4.61
2404 2833 5.218885 TGCAACAAAAGTGATTAATCGTGG 58.781 37.500 10.80 0.71 0.00 4.94
2444 2873 3.644966 TTGCTATCGGAAATCCACCTT 57.355 42.857 0.00 0.00 35.14 3.50
2452 2881 8.519526 ACTTATGTTTGAAATTGCTATCGGAAA 58.480 29.630 0.00 0.00 0.00 3.13
2485 2914 7.227156 AGGTTGTTTGAAAGATCTATCTGTGT 58.773 34.615 0.00 0.00 37.19 3.72
2561 2997 7.223582 ACATGTCATTGTCTAAGAGATTAAGCG 59.776 37.037 0.00 0.00 0.00 4.68
2566 3002 7.497249 GCCTAACATGTCATTGTCTAAGAGATT 59.503 37.037 0.00 0.00 0.00 2.40
2573 3009 3.780294 AGGGCCTAACATGTCATTGTCTA 59.220 43.478 2.82 0.00 0.00 2.59
2620 3056 3.572604 AGAAACCCGTTCTAGACTTCG 57.427 47.619 0.00 0.00 45.18 3.79
2819 3255 4.866508 TGTCTTAGACCTGAAACATCGT 57.133 40.909 10.10 0.00 0.00 3.73
2984 3422 6.992664 ATGAGAGGTCTAATGATGCTAAGT 57.007 37.500 0.00 0.00 0.00 2.24
3021 3459 4.751028 GCAAGGAATATGGGAATGCTACCT 60.751 45.833 0.00 0.00 0.00 3.08
3141 3582 1.901833 AGCCCAACATTCCCAATCAAC 59.098 47.619 0.00 0.00 0.00 3.18
3199 3640 4.530710 TGTTACTTGAGCGAGGTATGTT 57.469 40.909 0.00 0.00 0.00 2.71
3262 3703 3.381272 ACACAAATGGCAATAGCGCTAAT 59.619 39.130 22.98 10.86 43.41 1.73
3265 3706 1.176527 ACACAAATGGCAATAGCGCT 58.823 45.000 17.26 17.26 43.41 5.92
3342 3783 2.814269 CGATGGCCTATGATATCGGTG 58.186 52.381 11.92 0.00 38.87 4.94
3349 3790 3.957497 GAGACTATCCGATGGCCTATGAT 59.043 47.826 3.32 3.57 0.00 2.45
3414 3855 0.322456 TTCCGCATCCCAAGAGGTTG 60.322 55.000 0.00 0.00 38.25 3.77
3418 3859 0.393537 AAGCTTCCGCATCCCAAGAG 60.394 55.000 0.00 0.00 39.10 2.85
3438 3879 0.881796 GGCCCTTGAAGACTTTTCCG 59.118 55.000 0.00 0.00 0.00 4.30
3492 3933 1.561076 TGGTCCAGCTGCATATCAAGT 59.439 47.619 8.66 0.00 0.00 3.16
3498 3939 2.591753 GCCTGGTCCAGCTGCATA 59.408 61.111 13.99 0.00 0.00 3.14
3510 3951 0.527565 CGAAACTTTGGATGGCCTGG 59.472 55.000 3.32 0.00 34.31 4.45
3603 4044 5.241662 GGAAACACTAGTGCTCTGAAATCT 58.758 41.667 22.90 0.00 0.00 2.40
3667 4108 3.758554 CCCAAATCCACTGTACTCTTTGG 59.241 47.826 12.63 12.63 41.32 3.28
3669 4110 4.993705 TCCCAAATCCACTGTACTCTTT 57.006 40.909 0.00 0.00 0.00 2.52
3682 4123 7.494298 GTCTAGTCTCTCAAGAAATCCCAAATC 59.506 40.741 0.00 0.00 31.93 2.17
3684 4125 6.270000 TGTCTAGTCTCTCAAGAAATCCCAAA 59.730 38.462 0.00 0.00 31.93 3.28
3717 4158 2.805194 TCCATTGCCATTGACACATCA 58.195 42.857 0.00 0.00 0.00 3.07
3726 4167 3.322828 GGTGCAGATAATCCATTGCCATT 59.677 43.478 0.00 0.00 35.75 3.16
3910 4351 2.018542 GCTAATTGCGTACCTGGTGA 57.981 50.000 10.23 0.00 0.00 4.02
3988 4432 6.723298 TGTTCAACCATATTGTTTCAGGTT 57.277 33.333 0.00 0.00 42.94 3.50
4141 4588 0.734889 GTGCGCCAAACATAGCATCT 59.265 50.000 4.18 0.00 41.88 2.90
4202 4649 2.325583 TCAACGACTTGGACAAGCTT 57.674 45.000 11.73 0.00 41.99 3.74
4696 5152 1.617322 TGCTGAGTACTCTCACCGTT 58.383 50.000 23.01 0.00 44.58 4.44
4747 5203 6.710744 GTCTTGTTCAGATTTGAGAAAGGGTA 59.289 38.462 8.98 0.00 34.15 3.69
4813 5269 2.095364 GCCTGCAGCTAATCATACATGC 60.095 50.000 8.66 0.00 38.99 4.06
4872 5352 2.146342 GGCACGGGATGATAACTCATG 58.854 52.381 0.00 0.00 42.27 3.07
4873 5353 1.072331 GGGCACGGGATGATAACTCAT 59.928 52.381 0.00 0.00 44.93 2.90
5005 5489 8.959676 ATAAAACTTGGTGATACCCCTAAAAA 57.040 30.769 0.00 0.00 37.50 1.94
5006 5490 8.808092 CAATAAAACTTGGTGATACCCCTAAAA 58.192 33.333 0.00 0.00 37.50 1.52
5007 5491 8.171400 TCAATAAAACTTGGTGATACCCCTAAA 58.829 33.333 0.00 0.00 37.50 1.85
5008 5492 7.700846 TCAATAAAACTTGGTGATACCCCTAA 58.299 34.615 0.00 0.00 37.50 2.69
5009 5493 7.273457 TCAATAAAACTTGGTGATACCCCTA 57.727 36.000 0.00 0.00 37.50 3.53
5010 5494 6.147437 TCAATAAAACTTGGTGATACCCCT 57.853 37.500 0.00 0.00 37.50 4.79
5011 5495 6.605594 TGATCAATAAAACTTGGTGATACCCC 59.394 38.462 0.00 0.00 37.50 4.95
5012 5496 7.639113 TGATCAATAAAACTTGGTGATACCC 57.361 36.000 0.00 0.00 37.50 3.69
5013 5497 9.353999 GTTTGATCAATAAAACTTGGTGATACC 57.646 33.333 9.40 0.00 34.83 2.73
5016 5500 8.306761 GGAGTTTGATCAATAAAACTTGGTGAT 58.693 33.333 9.40 0.00 44.53 3.06
5017 5501 7.286546 TGGAGTTTGATCAATAAAACTTGGTGA 59.713 33.333 9.40 0.00 44.53 4.02
5018 5502 7.382218 GTGGAGTTTGATCAATAAAACTTGGTG 59.618 37.037 9.40 0.00 44.53 4.17
5019 5503 7.069331 TGTGGAGTTTGATCAATAAAACTTGGT 59.931 33.333 9.40 0.00 44.53 3.67
5020 5504 7.432869 TGTGGAGTTTGATCAATAAAACTTGG 58.567 34.615 9.40 0.00 44.53 3.61
5021 5505 8.918658 CATGTGGAGTTTGATCAATAAAACTTG 58.081 33.333 9.40 8.96 44.53 3.16
5022 5506 8.090214 CCATGTGGAGTTTGATCAATAAAACTT 58.910 33.333 9.40 1.06 44.53 2.66
5023 5507 7.451255 TCCATGTGGAGTTTGATCAATAAAACT 59.549 33.333 9.40 9.58 46.56 2.66
5024 5508 7.601856 TCCATGTGGAGTTTGATCAATAAAAC 58.398 34.615 9.40 4.38 39.78 2.43
5025 5509 7.773489 TCCATGTGGAGTTTGATCAATAAAA 57.227 32.000 9.40 0.00 39.78 1.52
5042 5526 1.536940 TTGTGATGCCACTCCATGTG 58.463 50.000 0.00 0.00 43.55 3.21
5043 5527 2.372264 GATTGTGATGCCACTCCATGT 58.628 47.619 0.00 0.00 43.55 3.21
5044 5528 1.332686 CGATTGTGATGCCACTCCATG 59.667 52.381 0.00 0.00 43.55 3.66
5045 5529 1.671979 CGATTGTGATGCCACTCCAT 58.328 50.000 0.00 0.00 43.55 3.41
5046 5530 0.392863 CCGATTGTGATGCCACTCCA 60.393 55.000 0.00 0.00 43.55 3.86
5047 5531 0.107703 TCCGATTGTGATGCCACTCC 60.108 55.000 0.00 0.00 43.55 3.85
5048 5532 1.869767 GATCCGATTGTGATGCCACTC 59.130 52.381 0.00 0.00 43.55 3.51
5049 5533 1.210234 TGATCCGATTGTGATGCCACT 59.790 47.619 0.00 0.00 43.55 4.00
5050 5534 1.667236 TGATCCGATTGTGATGCCAC 58.333 50.000 0.00 0.00 43.46 5.01
5051 5535 2.223745 CATGATCCGATTGTGATGCCA 58.776 47.619 0.00 0.00 0.00 4.92
5052 5536 1.538512 CCATGATCCGATTGTGATGCC 59.461 52.381 0.00 0.00 0.00 4.40
5053 5537 1.538512 CCCATGATCCGATTGTGATGC 59.461 52.381 0.00 0.00 0.00 3.91
5054 5538 2.156917 CCCCATGATCCGATTGTGATG 58.843 52.381 0.00 0.00 0.00 3.07
5055 5539 1.776667 ACCCCATGATCCGATTGTGAT 59.223 47.619 0.00 0.00 0.00 3.06
5056 5540 1.212375 ACCCCATGATCCGATTGTGA 58.788 50.000 0.00 0.00 0.00 3.58
5057 5541 1.677576 CAACCCCATGATCCGATTGTG 59.322 52.381 0.00 0.00 0.00 3.33
5058 5542 2.023788 GCAACCCCATGATCCGATTGT 61.024 52.381 0.00 0.00 0.00 2.71
5059 5543 0.670162 GCAACCCCATGATCCGATTG 59.330 55.000 0.00 0.00 0.00 2.67
5060 5544 0.258484 TGCAACCCCATGATCCGATT 59.742 50.000 0.00 0.00 0.00 3.34
5061 5545 0.479815 ATGCAACCCCATGATCCGAT 59.520 50.000 0.00 0.00 0.00 4.18
5062 5546 0.179020 GATGCAACCCCATGATCCGA 60.179 55.000 0.00 0.00 0.00 4.55
5063 5547 0.466007 TGATGCAACCCCATGATCCG 60.466 55.000 0.00 0.00 0.00 4.18
5064 5548 1.410153 GTTGATGCAACCCCATGATCC 59.590 52.381 0.00 0.00 38.30 3.36
5065 5549 1.066002 CGTTGATGCAACCCCATGATC 59.934 52.381 0.00 0.00 40.82 2.92
5066 5550 1.105457 CGTTGATGCAACCCCATGAT 58.895 50.000 0.00 0.00 40.82 2.45
5067 5551 0.037447 TCGTTGATGCAACCCCATGA 59.963 50.000 0.00 0.00 40.82 3.07
5068 5552 0.887247 TTCGTTGATGCAACCCCATG 59.113 50.000 0.00 0.00 40.82 3.66
5069 5553 1.272212 GTTTCGTTGATGCAACCCCAT 59.728 47.619 0.00 0.00 40.82 4.00
5070 5554 0.671251 GTTTCGTTGATGCAACCCCA 59.329 50.000 0.00 0.00 40.82 4.96
5071 5555 0.671251 TGTTTCGTTGATGCAACCCC 59.329 50.000 0.00 0.00 40.82 4.95
5072 5556 2.288152 ACATGTTTCGTTGATGCAACCC 60.288 45.455 0.00 0.00 40.82 4.11
5073 5557 2.979813 GACATGTTTCGTTGATGCAACC 59.020 45.455 0.00 0.00 40.82 3.77
5074 5558 3.888934 AGACATGTTTCGTTGATGCAAC 58.111 40.909 0.00 0.00 40.54 4.17
5075 5559 3.058293 GGAGACATGTTTCGTTGATGCAA 60.058 43.478 10.03 0.00 0.00 4.08
5076 5560 2.483877 GGAGACATGTTTCGTTGATGCA 59.516 45.455 10.03 0.00 0.00 3.96
5077 5561 2.159517 GGGAGACATGTTTCGTTGATGC 60.160 50.000 10.03 0.00 0.00 3.91
5078 5562 2.420022 GGGGAGACATGTTTCGTTGATG 59.580 50.000 10.03 0.00 0.00 3.07
5079 5563 2.305927 AGGGGAGACATGTTTCGTTGAT 59.694 45.455 10.03 0.00 0.00 2.57
5080 5564 1.697432 AGGGGAGACATGTTTCGTTGA 59.303 47.619 10.03 0.00 0.00 3.18
5081 5565 1.806542 CAGGGGAGACATGTTTCGTTG 59.193 52.381 10.03 5.01 0.00 4.10
5082 5566 1.697432 TCAGGGGAGACATGTTTCGTT 59.303 47.619 10.03 0.00 0.00 3.85
5083 5567 1.348064 TCAGGGGAGACATGTTTCGT 58.652 50.000 10.03 0.00 0.00 3.85
5084 5568 2.169352 AGATCAGGGGAGACATGTTTCG 59.831 50.000 10.03 0.00 0.00 3.46
5085 5569 3.922171 AGATCAGGGGAGACATGTTTC 57.078 47.619 7.85 7.85 0.00 2.78
5086 5570 4.624913 TCTAGATCAGGGGAGACATGTTT 58.375 43.478 0.00 0.00 0.00 2.83
5087 5571 4.078922 TCTCTAGATCAGGGGAGACATGTT 60.079 45.833 0.00 0.00 31.02 2.71
5088 5572 3.465210 TCTCTAGATCAGGGGAGACATGT 59.535 47.826 0.00 0.00 31.02 3.21
5089 5573 4.111255 TCTCTAGATCAGGGGAGACATG 57.889 50.000 0.00 0.00 31.02 3.21
5090 5574 4.823364 TTCTCTAGATCAGGGGAGACAT 57.177 45.455 0.00 0.00 35.02 3.06
5091 5575 4.823364 ATTCTCTAGATCAGGGGAGACA 57.177 45.455 0.00 0.00 35.02 3.41
5092 5576 5.600484 TCAAATTCTCTAGATCAGGGGAGAC 59.400 44.000 0.00 0.00 35.02 3.36
5093 5577 5.781827 TCAAATTCTCTAGATCAGGGGAGA 58.218 41.667 0.00 0.00 33.69 3.71
5094 5578 6.684897 ATCAAATTCTCTAGATCAGGGGAG 57.315 41.667 0.00 0.00 0.00 4.30
5095 5579 7.791766 AGTTATCAAATTCTCTAGATCAGGGGA 59.208 37.037 0.00 0.00 0.00 4.81
5096 5580 7.972301 AGTTATCAAATTCTCTAGATCAGGGG 58.028 38.462 0.00 0.00 0.00 4.79
5097 5581 9.270640 CAAGTTATCAAATTCTCTAGATCAGGG 57.729 37.037 0.00 0.00 0.00 4.45
5098 5582 9.270640 CCAAGTTATCAAATTCTCTAGATCAGG 57.729 37.037 0.00 0.00 0.00 3.86
5099 5583 8.772705 GCCAAGTTATCAAATTCTCTAGATCAG 58.227 37.037 0.00 0.00 0.00 2.90
5100 5584 8.489489 AGCCAAGTTATCAAATTCTCTAGATCA 58.511 33.333 0.00 0.00 0.00 2.92
5101 5585 8.900983 AGCCAAGTTATCAAATTCTCTAGATC 57.099 34.615 0.00 0.00 0.00 2.75
5103 5587 9.601217 GTTAGCCAAGTTATCAAATTCTCTAGA 57.399 33.333 0.00 0.00 0.00 2.43
5104 5588 8.831550 GGTTAGCCAAGTTATCAAATTCTCTAG 58.168 37.037 0.00 0.00 34.09 2.43
5105 5589 8.548877 AGGTTAGCCAAGTTATCAAATTCTCTA 58.451 33.333 0.00 0.00 37.19 2.43
5106 5590 7.406104 AGGTTAGCCAAGTTATCAAATTCTCT 58.594 34.615 0.00 0.00 37.19 3.10
5107 5591 7.631717 AGGTTAGCCAAGTTATCAAATTCTC 57.368 36.000 0.00 0.00 37.19 2.87
5108 5592 9.343539 GATAGGTTAGCCAAGTTATCAAATTCT 57.656 33.333 0.00 0.00 37.19 2.40
5109 5593 8.283291 CGATAGGTTAGCCAAGTTATCAAATTC 58.717 37.037 0.00 0.00 37.19 2.17
5110 5594 8.154649 CGATAGGTTAGCCAAGTTATCAAATT 57.845 34.615 0.00 0.00 37.19 1.82
5111 5595 7.730364 CGATAGGTTAGCCAAGTTATCAAAT 57.270 36.000 0.00 0.00 37.19 2.32
5130 5614 3.320078 CAACCGCGACGCCGATAG 61.320 66.667 15.34 0.00 38.22 2.08
5131 5615 3.813143 TCAACCGCGACGCCGATA 61.813 61.111 15.34 0.00 38.22 2.92
5143 5627 4.699522 AAGGCCGAGCGGTCAACC 62.700 66.667 16.49 14.58 43.56 3.77
5144 5628 3.119096 GAAGGCCGAGCGGTCAAC 61.119 66.667 16.49 5.35 43.56 3.18
5145 5629 4.735132 CGAAGGCCGAGCGGTCAA 62.735 66.667 16.49 0.00 43.56 3.18
5153 5637 3.365565 GCAATTTTACTTTCGAAGGCCGA 60.366 43.478 7.26 0.00 46.94 5.54
5154 5638 2.914838 GCAATTTTACTTTCGAAGGCCG 59.085 45.455 7.26 0.00 40.25 6.13
5155 5639 3.908213 TGCAATTTTACTTTCGAAGGCC 58.092 40.909 7.26 0.00 0.00 5.19
5156 5640 6.466308 AATTGCAATTTTACTTTCGAAGGC 57.534 33.333 18.99 0.00 0.00 4.35
5198 5682 6.531021 GGGACCATCTTATCGGAGATAAAAA 58.469 40.000 0.00 0.00 45.12 1.94
5199 5683 5.279306 CGGGACCATCTTATCGGAGATAAAA 60.279 44.000 0.00 0.00 45.12 1.52
5200 5684 4.219944 CGGGACCATCTTATCGGAGATAAA 59.780 45.833 0.00 0.00 45.12 1.40
5201 5685 3.762288 CGGGACCATCTTATCGGAGATAA 59.238 47.826 0.00 2.95 45.12 1.75
5202 5686 3.245158 ACGGGACCATCTTATCGGAGATA 60.245 47.826 0.00 0.00 45.12 1.98
5203 5687 2.171840 CGGGACCATCTTATCGGAGAT 58.828 52.381 0.00 0.00 45.12 2.75
5204 5688 1.133575 ACGGGACCATCTTATCGGAGA 60.134 52.381 0.00 0.00 45.75 3.71
5205 5689 1.329256 ACGGGACCATCTTATCGGAG 58.671 55.000 0.00 0.00 0.00 4.63
5206 5690 2.233271 GTACGGGACCATCTTATCGGA 58.767 52.381 0.00 0.00 0.00 4.55
5207 5691 1.958579 TGTACGGGACCATCTTATCGG 59.041 52.381 0.00 0.00 0.00 4.18
5208 5692 2.359848 TGTGTACGGGACCATCTTATCG 59.640 50.000 0.00 0.00 0.00 2.92
5209 5693 3.492137 GGTGTGTACGGGACCATCTTATC 60.492 52.174 0.00 0.00 0.00 1.75
5210 5694 2.433239 GGTGTGTACGGGACCATCTTAT 59.567 50.000 0.00 0.00 0.00 1.73
5211 5695 1.826720 GGTGTGTACGGGACCATCTTA 59.173 52.381 0.00 0.00 0.00 2.10
5212 5696 0.611714 GGTGTGTACGGGACCATCTT 59.388 55.000 0.00 0.00 0.00 2.40
5213 5697 0.543410 TGGTGTGTACGGGACCATCT 60.543 55.000 6.40 0.00 34.75 2.90
5214 5698 0.539986 ATGGTGTGTACGGGACCATC 59.460 55.000 14.47 0.00 45.56 3.51
5215 5699 2.691663 ATGGTGTGTACGGGACCAT 58.308 52.632 14.47 14.47 43.69 3.55
5216 5700 0.035598 CAATGGTGTGTACGGGACCA 59.964 55.000 11.61 11.61 43.83 4.02
5217 5701 0.675522 CCAATGGTGTGTACGGGACC 60.676 60.000 0.00 1.67 0.00 4.46
5218 5702 0.322322 TCCAATGGTGTGTACGGGAC 59.678 55.000 0.00 0.00 0.00 4.46
5219 5703 0.611200 CTCCAATGGTGTGTACGGGA 59.389 55.000 0.00 0.00 0.00 5.14
5220 5704 1.024579 GCTCCAATGGTGTGTACGGG 61.025 60.000 0.00 0.00 0.00 5.28
5221 5705 1.024579 GGCTCCAATGGTGTGTACGG 61.025 60.000 0.00 0.00 0.00 4.02
5222 5706 1.358725 CGGCTCCAATGGTGTGTACG 61.359 60.000 0.00 0.00 0.00 3.67
5223 5707 1.644786 GCGGCTCCAATGGTGTGTAC 61.645 60.000 0.00 0.00 0.00 2.90
5224 5708 1.376683 GCGGCTCCAATGGTGTGTA 60.377 57.895 0.00 0.00 0.00 2.90
5225 5709 2.672996 GCGGCTCCAATGGTGTGT 60.673 61.111 0.00 0.00 0.00 3.72
5226 5710 2.360350 AGCGGCTCCAATGGTGTG 60.360 61.111 0.00 0.00 0.00 3.82
5227 5711 2.360350 CAGCGGCTCCAATGGTGT 60.360 61.111 0.00 0.00 0.00 4.16
5228 5712 1.973281 AACAGCGGCTCCAATGGTG 60.973 57.895 0.00 0.00 37.16 4.17
5229 5713 1.973281 CAACAGCGGCTCCAATGGT 60.973 57.895 0.00 0.00 0.00 3.55
5230 5714 1.033746 ATCAACAGCGGCTCCAATGG 61.034 55.000 0.00 0.00 0.00 3.16
5231 5715 0.379669 GATCAACAGCGGCTCCAATG 59.620 55.000 0.00 0.00 0.00 2.82
5232 5716 0.254178 AGATCAACAGCGGCTCCAAT 59.746 50.000 0.00 0.00 0.00 3.16
5233 5717 0.391661 GAGATCAACAGCGGCTCCAA 60.392 55.000 0.00 0.00 0.00 3.53
5234 5718 1.219124 GAGATCAACAGCGGCTCCA 59.781 57.895 0.00 0.00 0.00 3.86
5235 5719 1.086634 GTGAGATCAACAGCGGCTCC 61.087 60.000 0.00 0.00 0.00 4.70
5236 5720 1.086634 GGTGAGATCAACAGCGGCTC 61.087 60.000 0.00 0.00 32.77 4.70
5237 5721 1.078848 GGTGAGATCAACAGCGGCT 60.079 57.895 0.00 0.00 32.77 5.52
5238 5722 2.109126 GGGTGAGATCAACAGCGGC 61.109 63.158 13.15 0.00 34.61 6.53
5239 5723 1.021390 GTGGGTGAGATCAACAGCGG 61.021 60.000 13.15 0.00 34.61 5.52
5240 5724 0.320683 TGTGGGTGAGATCAACAGCG 60.321 55.000 13.15 0.00 34.61 5.18
5241 5725 1.537202 GTTGTGGGTGAGATCAACAGC 59.463 52.381 11.75 11.75 39.59 4.40
5242 5726 2.154462 GGTTGTGGGTGAGATCAACAG 58.846 52.381 0.00 0.00 40.96 3.16
5243 5727 1.774254 AGGTTGTGGGTGAGATCAACA 59.226 47.619 0.00 0.00 40.96 3.33
5244 5728 2.154462 CAGGTTGTGGGTGAGATCAAC 58.846 52.381 0.00 0.00 39.24 3.18
5245 5729 1.545428 GCAGGTTGTGGGTGAGATCAA 60.545 52.381 0.00 0.00 0.00 2.57
5246 5730 0.036732 GCAGGTTGTGGGTGAGATCA 59.963 55.000 0.00 0.00 0.00 2.92
5247 5731 0.326264 AGCAGGTTGTGGGTGAGATC 59.674 55.000 0.00 0.00 0.00 2.75
5248 5732 0.773644 AAGCAGGTTGTGGGTGAGAT 59.226 50.000 0.00 0.00 0.00 2.75
5249 5733 0.108585 GAAGCAGGTTGTGGGTGAGA 59.891 55.000 0.00 0.00 0.00 3.27
5250 5734 1.230635 CGAAGCAGGTTGTGGGTGAG 61.231 60.000 0.00 0.00 0.00 3.51
5251 5735 1.227823 CGAAGCAGGTTGTGGGTGA 60.228 57.895 0.00 0.00 0.00 4.02
5252 5736 1.227823 TCGAAGCAGGTTGTGGGTG 60.228 57.895 0.00 0.00 0.00 4.61
5253 5737 1.071471 CTCGAAGCAGGTTGTGGGT 59.929 57.895 0.00 0.00 0.00 4.51
5254 5738 0.951040 GACTCGAAGCAGGTTGTGGG 60.951 60.000 0.00 0.00 0.00 4.61
5255 5739 0.249868 TGACTCGAAGCAGGTTGTGG 60.250 55.000 0.00 0.00 0.00 4.17
5256 5740 1.143305 CTGACTCGAAGCAGGTTGTG 58.857 55.000 6.34 0.00 0.00 3.33
5257 5741 1.040646 TCTGACTCGAAGCAGGTTGT 58.959 50.000 12.61 0.00 33.05 3.32
5258 5742 1.423395 GTCTGACTCGAAGCAGGTTG 58.577 55.000 12.61 0.00 33.05 3.77
5259 5743 0.039074 CGTCTGACTCGAAGCAGGTT 60.039 55.000 12.61 0.00 33.05 3.50
5260 5744 1.581954 CGTCTGACTCGAAGCAGGT 59.418 57.895 12.61 0.00 33.05 4.00
5261 5745 1.803519 GCGTCTGACTCGAAGCAGG 60.804 63.158 12.61 1.68 38.13 4.85
5262 5746 1.803519 GGCGTCTGACTCGAAGCAG 60.804 63.158 6.21 7.65 39.65 4.24
5263 5747 2.258591 GGCGTCTGACTCGAAGCA 59.741 61.111 6.21 0.00 39.65 3.91
5264 5748 2.089349 GTGGCGTCTGACTCGAAGC 61.089 63.158 6.21 1.25 37.62 3.86
5265 5749 0.318699 TTGTGGCGTCTGACTCGAAG 60.319 55.000 6.21 0.00 0.00 3.79
5266 5750 0.596600 GTTGTGGCGTCTGACTCGAA 60.597 55.000 6.21 0.00 0.00 3.71
5267 5751 1.007734 GTTGTGGCGTCTGACTCGA 60.008 57.895 6.21 0.00 0.00 4.04
5268 5752 2.365068 CGTTGTGGCGTCTGACTCG 61.365 63.158 6.21 0.00 0.00 4.18
5269 5753 0.596600 TTCGTTGTGGCGTCTGACTC 60.597 55.000 6.21 0.00 0.00 3.36
5270 5754 0.597637 CTTCGTTGTGGCGTCTGACT 60.598 55.000 6.21 0.00 0.00 3.41
5271 5755 0.874607 ACTTCGTTGTGGCGTCTGAC 60.875 55.000 0.00 0.00 0.00 3.51
5272 5756 0.179094 AACTTCGTTGTGGCGTCTGA 60.179 50.000 0.00 0.00 0.00 3.27
5273 5757 0.232303 GAACTTCGTTGTGGCGTCTG 59.768 55.000 0.00 0.00 0.00 3.51
5274 5758 0.104304 AGAACTTCGTTGTGGCGTCT 59.896 50.000 0.00 0.00 0.00 4.18
5275 5759 0.232303 CAGAACTTCGTTGTGGCGTC 59.768 55.000 0.00 0.00 33.94 5.19
5276 5760 0.461339 ACAGAACTTCGTTGTGGCGT 60.461 50.000 8.44 0.00 40.42 5.68
5277 5761 1.493772 TACAGAACTTCGTTGTGGCG 58.506 50.000 8.44 0.00 40.42 5.69
5278 5762 2.610374 TGTTACAGAACTTCGTTGTGGC 59.390 45.455 8.44 0.59 40.42 5.01
5279 5763 5.418310 AATGTTACAGAACTTCGTTGTGG 57.582 39.130 8.44 0.00 40.42 4.17
5280 5764 6.202188 ACCTAATGTTACAGAACTTCGTTGTG 59.798 38.462 2.78 2.78 41.59 3.33
5281 5765 6.285990 ACCTAATGTTACAGAACTTCGTTGT 58.714 36.000 0.00 0.00 36.45 3.32
5282 5766 6.422701 TGACCTAATGTTACAGAACTTCGTTG 59.577 38.462 0.00 0.00 36.45 4.10
5283 5767 6.518493 TGACCTAATGTTACAGAACTTCGTT 58.482 36.000 0.00 0.00 36.45 3.85
5284 5768 6.092955 TGACCTAATGTTACAGAACTTCGT 57.907 37.500 0.00 0.00 36.45 3.85
5285 5769 7.009631 CAGATGACCTAATGTTACAGAACTTCG 59.990 40.741 0.00 0.00 36.45 3.79
5286 5770 7.201565 GCAGATGACCTAATGTTACAGAACTTC 60.202 40.741 0.00 0.00 36.45 3.01
5287 5771 6.595716 GCAGATGACCTAATGTTACAGAACTT 59.404 38.462 0.00 0.00 36.45 2.66
5288 5772 6.070538 AGCAGATGACCTAATGTTACAGAACT 60.071 38.462 0.00 0.00 36.45 3.01
5289 5773 6.109359 AGCAGATGACCTAATGTTACAGAAC 58.891 40.000 0.00 0.00 36.00 3.01
5290 5774 6.299805 AGCAGATGACCTAATGTTACAGAA 57.700 37.500 0.00 0.00 0.00 3.02
5291 5775 5.939764 AGCAGATGACCTAATGTTACAGA 57.060 39.130 0.00 0.00 0.00 3.41
5292 5776 6.703607 CCTTAGCAGATGACCTAATGTTACAG 59.296 42.308 0.00 0.00 0.00 2.74
5293 5777 6.382859 TCCTTAGCAGATGACCTAATGTTACA 59.617 38.462 0.00 0.00 0.00 2.41
5294 5778 6.817184 TCCTTAGCAGATGACCTAATGTTAC 58.183 40.000 0.00 0.00 0.00 2.50
5295 5779 6.839134 TCTCCTTAGCAGATGACCTAATGTTA 59.161 38.462 0.00 0.00 0.00 2.41
5296 5780 5.663106 TCTCCTTAGCAGATGACCTAATGTT 59.337 40.000 0.00 0.00 0.00 2.71
5297 5781 5.211973 TCTCCTTAGCAGATGACCTAATGT 58.788 41.667 0.00 0.00 0.00 2.71
5298 5782 5.538053 TCTCTCCTTAGCAGATGACCTAATG 59.462 44.000 0.00 0.00 0.00 1.90
5299 5783 5.710646 TCTCTCCTTAGCAGATGACCTAAT 58.289 41.667 0.00 0.00 0.00 1.73
5300 5784 5.130705 TCTCTCCTTAGCAGATGACCTAA 57.869 43.478 0.00 0.00 0.00 2.69
5301 5785 4.724399 CTCTCTCCTTAGCAGATGACCTA 58.276 47.826 0.00 0.00 0.00 3.08
5302 5786 3.565307 CTCTCTCCTTAGCAGATGACCT 58.435 50.000 0.00 0.00 0.00 3.85
5303 5787 2.035832 GCTCTCTCCTTAGCAGATGACC 59.964 54.545 0.00 0.00 38.63 4.02
5304 5788 2.035832 GGCTCTCTCCTTAGCAGATGAC 59.964 54.545 0.00 0.00 40.61 3.06
5305 5789 2.091389 AGGCTCTCTCCTTAGCAGATGA 60.091 50.000 0.00 0.00 40.61 2.92
5306 5790 2.297033 GAGGCTCTCTCCTTAGCAGATG 59.703 54.545 7.40 0.00 40.61 2.90
5307 5791 2.597455 GAGGCTCTCTCCTTAGCAGAT 58.403 52.381 7.40 0.00 40.61 2.90
5308 5792 2.065899 GAGGCTCTCTCCTTAGCAGA 57.934 55.000 7.40 0.00 40.61 4.26
5317 5801 2.433994 CCTGCAGGGAGGCTCTCTC 61.434 68.421 26.14 10.24 41.71 3.20
5318 5802 2.365370 CCTGCAGGGAGGCTCTCT 60.365 66.667 26.14 12.18 37.23 3.10
5328 5812 0.835941 AGCTATTGACTCCCTGCAGG 59.164 55.000 26.87 26.87 0.00 4.85
5329 5813 2.559440 GAAGCTATTGACTCCCTGCAG 58.441 52.381 6.78 6.78 0.00 4.41
5330 5814 1.210478 GGAAGCTATTGACTCCCTGCA 59.790 52.381 0.00 0.00 0.00 4.41
5331 5815 1.210478 TGGAAGCTATTGACTCCCTGC 59.790 52.381 0.00 0.00 0.00 4.85
5332 5816 3.853355 ATGGAAGCTATTGACTCCCTG 57.147 47.619 0.00 0.00 0.00 4.45
5333 5817 4.561752 ACTATGGAAGCTATTGACTCCCT 58.438 43.478 0.00 0.00 0.00 4.20
5334 5818 4.965200 ACTATGGAAGCTATTGACTCCC 57.035 45.455 0.00 0.00 0.00 4.30
5335 5819 4.513318 GCAACTATGGAAGCTATTGACTCC 59.487 45.833 0.00 0.00 0.00 3.85
5336 5820 5.118990 TGCAACTATGGAAGCTATTGACTC 58.881 41.667 0.00 0.00 0.00 3.36
5337 5821 5.102953 TGCAACTATGGAAGCTATTGACT 57.897 39.130 0.00 0.00 0.00 3.41
5338 5822 4.260948 GCTGCAACTATGGAAGCTATTGAC 60.261 45.833 0.00 0.00 0.00 3.18
5339 5823 3.879295 GCTGCAACTATGGAAGCTATTGA 59.121 43.478 0.00 0.00 0.00 2.57
5340 5824 3.628942 TGCTGCAACTATGGAAGCTATTG 59.371 43.478 0.00 0.00 0.00 1.90
5341 5825 3.889815 TGCTGCAACTATGGAAGCTATT 58.110 40.909 0.00 0.00 0.00 1.73
5342 5826 3.565764 TGCTGCAACTATGGAAGCTAT 57.434 42.857 0.00 0.00 0.00 2.97
5343 5827 3.565764 ATGCTGCAACTATGGAAGCTA 57.434 42.857 6.36 0.00 0.00 3.32
5344 5828 2.426024 CAATGCTGCAACTATGGAAGCT 59.574 45.455 6.36 0.00 0.00 3.74
5345 5829 2.805845 CAATGCTGCAACTATGGAAGC 58.194 47.619 6.36 0.00 0.00 3.86
5358 5842 0.035725 TGAGGGAGTGAGCAATGCTG 60.036 55.000 14.48 0.00 39.88 4.41
5359 5843 0.694771 TTGAGGGAGTGAGCAATGCT 59.305 50.000 7.79 7.79 43.88 3.79
5360 5844 1.760192 ATTGAGGGAGTGAGCAATGC 58.240 50.000 0.00 0.00 30.43 3.56
5361 5845 3.629398 GGTTATTGAGGGAGTGAGCAATG 59.371 47.826 0.00 0.00 33.45 2.82
5362 5846 3.266772 TGGTTATTGAGGGAGTGAGCAAT 59.733 43.478 0.00 0.00 35.38 3.56
5363 5847 2.642311 TGGTTATTGAGGGAGTGAGCAA 59.358 45.455 0.00 0.00 0.00 3.91
5364 5848 2.265367 TGGTTATTGAGGGAGTGAGCA 58.735 47.619 0.00 0.00 0.00 4.26
5365 5849 3.350219 TTGGTTATTGAGGGAGTGAGC 57.650 47.619 0.00 0.00 0.00 4.26
5366 5850 5.165961 TCTTTGGTTATTGAGGGAGTGAG 57.834 43.478 0.00 0.00 0.00 3.51
5367 5851 4.019321 CCTCTTTGGTTATTGAGGGAGTGA 60.019 45.833 0.00 0.00 41.59 3.41
5368 5852 4.019321 TCCTCTTTGGTTATTGAGGGAGTG 60.019 45.833 7.86 0.00 44.43 3.51
5369 5853 4.175962 TCCTCTTTGGTTATTGAGGGAGT 58.824 43.478 7.86 0.00 44.43 3.85
5370 5854 4.775236 CTCCTCTTTGGTTATTGAGGGAG 58.225 47.826 7.86 0.00 44.43 4.30
5371 5855 3.054361 GCTCCTCTTTGGTTATTGAGGGA 60.054 47.826 7.86 0.00 44.43 4.20
5372 5856 3.054065 AGCTCCTCTTTGGTTATTGAGGG 60.054 47.826 7.86 1.34 44.43 4.30
5373 5857 4.227864 AGCTCCTCTTTGGTTATTGAGG 57.772 45.455 0.00 0.00 45.36 3.86
5374 5858 4.637977 GGAAGCTCCTCTTTGGTTATTGAG 59.362 45.833 0.00 0.00 34.56 3.02
5375 5859 4.042809 TGGAAGCTCCTCTTTGGTTATTGA 59.957 41.667 0.00 0.00 37.46 2.57
5376 5860 4.335416 TGGAAGCTCCTCTTTGGTTATTG 58.665 43.478 0.00 0.00 37.46 1.90
5377 5861 4.657814 TGGAAGCTCCTCTTTGGTTATT 57.342 40.909 0.00 0.00 37.46 1.40
5378 5862 4.202567 TGTTGGAAGCTCCTCTTTGGTTAT 60.203 41.667 0.00 0.00 37.46 1.89
5379 5863 3.137544 TGTTGGAAGCTCCTCTTTGGTTA 59.862 43.478 0.00 0.00 37.46 2.85
5380 5864 2.091885 TGTTGGAAGCTCCTCTTTGGTT 60.092 45.455 0.00 0.00 37.46 3.67
5381 5865 1.494721 TGTTGGAAGCTCCTCTTTGGT 59.505 47.619 0.00 0.00 37.46 3.67
5382 5866 2.276732 TGTTGGAAGCTCCTCTTTGG 57.723 50.000 0.00 0.00 37.46 3.28
5383 5867 6.521151 AATTATGTTGGAAGCTCCTCTTTG 57.479 37.500 0.00 0.00 37.46 2.77
5384 5868 6.603599 GGTAATTATGTTGGAAGCTCCTCTTT 59.396 38.462 0.00 0.00 37.46 2.52
5385 5869 6.122964 GGTAATTATGTTGGAAGCTCCTCTT 58.877 40.000 0.00 0.00 37.46 2.85
5386 5870 5.685075 CGGTAATTATGTTGGAAGCTCCTCT 60.685 44.000 0.00 0.00 37.46 3.69
5387 5871 4.511826 CGGTAATTATGTTGGAAGCTCCTC 59.488 45.833 0.00 0.00 37.46 3.71
5388 5872 4.080526 ACGGTAATTATGTTGGAAGCTCCT 60.081 41.667 0.00 0.00 37.46 3.69
5389 5873 4.196971 ACGGTAATTATGTTGGAAGCTCC 58.803 43.478 0.00 0.00 36.96 4.70
5390 5874 5.501897 CGAACGGTAATTATGTTGGAAGCTC 60.502 44.000 9.88 0.00 0.00 4.09
5391 5875 4.331717 CGAACGGTAATTATGTTGGAAGCT 59.668 41.667 9.88 0.00 0.00 3.74
5392 5876 4.584394 CGAACGGTAATTATGTTGGAAGC 58.416 43.478 9.88 0.00 0.00 3.86
5393 5877 4.093703 TGCGAACGGTAATTATGTTGGAAG 59.906 41.667 15.09 5.71 0.00 3.46
5394 5878 4.001652 TGCGAACGGTAATTATGTTGGAA 58.998 39.130 15.09 6.14 0.00 3.53
5395 5879 3.597255 TGCGAACGGTAATTATGTTGGA 58.403 40.909 15.09 6.49 0.00 3.53
5396 5880 4.272504 AGATGCGAACGGTAATTATGTTGG 59.727 41.667 9.88 9.74 0.00 3.77
5397 5881 5.234329 AGAGATGCGAACGGTAATTATGTTG 59.766 40.000 9.88 5.34 0.00 3.33
5398 5882 5.357257 AGAGATGCGAACGGTAATTATGTT 58.643 37.500 5.93 5.93 0.00 2.71
5399 5883 4.945246 AGAGATGCGAACGGTAATTATGT 58.055 39.130 0.00 0.00 0.00 2.29
5400 5884 5.918576 TGTAGAGATGCGAACGGTAATTATG 59.081 40.000 0.00 0.00 0.00 1.90
5401 5885 5.919141 GTGTAGAGATGCGAACGGTAATTAT 59.081 40.000 0.00 0.00 0.00 1.28
5402 5886 5.163632 TGTGTAGAGATGCGAACGGTAATTA 60.164 40.000 0.00 0.00 0.00 1.40
5403 5887 4.110482 GTGTAGAGATGCGAACGGTAATT 58.890 43.478 0.00 0.00 0.00 1.40
5404 5888 3.129813 TGTGTAGAGATGCGAACGGTAAT 59.870 43.478 0.00 0.00 0.00 1.89
5405 5889 2.488937 TGTGTAGAGATGCGAACGGTAA 59.511 45.455 0.00 0.00 0.00 2.85
5406 5890 2.086094 TGTGTAGAGATGCGAACGGTA 58.914 47.619 0.00 0.00 0.00 4.02
5407 5891 0.885879 TGTGTAGAGATGCGAACGGT 59.114 50.000 0.00 0.00 0.00 4.83
5408 5892 1.269166 GTGTGTAGAGATGCGAACGG 58.731 55.000 0.00 0.00 0.00 4.44
5409 5893 1.914051 CTGTGTGTAGAGATGCGAACG 59.086 52.381 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.