Multiple sequence alignment - TraesCS5D01G545400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G545400 chr5D 100.000 4102 0 0 1 4102 554499825 554503926 0.000000e+00 7576.0
1 TraesCS5D01G545400 chr5D 89.325 918 96 2 1424 2340 554479202 554480118 0.000000e+00 1151.0
2 TraesCS5D01G545400 chr5D 88.037 326 35 4 1224 1547 554478909 554479232 2.310000e-102 383.0
3 TraesCS5D01G545400 chr5D 88.679 106 7 1 620 720 554500152 554500257 1.550000e-24 124.0
4 TraesCS5D01G545400 chr5D 88.679 106 7 1 328 433 554500444 554500544 1.550000e-24 124.0
5 TraesCS5D01G545400 chr5B 90.259 3398 207 58 773 4102 696182512 696179171 0.000000e+00 4327.0
6 TraesCS5D01G545400 chr5B 88.841 923 103 0 1424 2346 696185242 696184320 0.000000e+00 1134.0
7 TraesCS5D01G545400 chr5B 82.440 336 41 7 2705 3037 696184191 696183871 1.120000e-70 278.0
8 TraesCS5D01G545400 chr5B 82.096 229 25 8 7 222 696182822 696182597 9.060000e-42 182.0
9 TraesCS5D01G545400 chr4A 91.581 2518 150 25 995 3486 614033626 614031145 0.000000e+00 3419.0
10 TraesCS5D01G545400 chr4A 91.695 891 72 2 1505 2394 614085199 614084310 0.000000e+00 1234.0
11 TraesCS5D01G545400 chr4A 91.368 892 73 4 1505 2394 614043377 614042488 0.000000e+00 1218.0
12 TraesCS5D01G545400 chr4A 91.368 892 73 4 1505 2394 614064286 614063397 0.000000e+00 1218.0
13 TraesCS5D01G545400 chr4A 88.299 923 108 0 1424 2346 614102665 614101743 0.000000e+00 1107.0
14 TraesCS5D01G545400 chr4A 87.609 573 27 13 3549 4102 614031142 614030595 3.480000e-175 625.0
15 TraesCS5D01G545400 chr4A 92.462 398 19 7 1 387 614100161 614099764 3.580000e-155 558.0
16 TraesCS5D01G545400 chr4A 88.037 326 35 4 1224 1547 614102958 614102635 2.310000e-102 383.0
17 TraesCS5D01G545400 chr4A 82.178 404 30 15 957 1324 614099400 614099003 3.980000e-80 309.0
18 TraesCS5D01G545400 chr4A 89.100 211 5 6 426 619 614100101 614099892 3.170000e-61 246.0
19 TraesCS5D01G545400 chr4A 85.778 225 20 9 46 262 614035505 614035285 1.150000e-55 228.0
20 TraesCS5D01G545400 chr4A 95.775 71 3 0 302 372 242875260 242875330 9.320000e-22 115.0
21 TraesCS5D01G545400 chr4A 85.185 108 12 2 779 883 614099630 614099524 1.560000e-19 108.0
22 TraesCS5D01G545400 chr4A 100.000 32 0 0 2834 2865 614101229 614101198 4.430000e-05 60.2
23 TraesCS5D01G545400 chr6D 89.916 119 10 2 780 897 344304539 344304656 7.100000e-33 152.0
24 TraesCS5D01G545400 chr7A 90.000 100 7 3 780 878 681997548 681997645 4.300000e-25 126.0
25 TraesCS5D01G545400 chr7A 81.395 129 18 2 306 433 55425439 55425316 2.610000e-17 100.0
26 TraesCS5D01G545400 chr4B 89.247 93 9 1 302 393 235376064 235376156 9.320000e-22 115.0
27 TraesCS5D01G545400 chr2A 95.775 71 2 1 302 372 740080496 740080427 3.350000e-21 113.0
28 TraesCS5D01G545400 chr2A 82.963 135 13 5 620 749 740120310 740120181 3.350000e-21 113.0
29 TraesCS5D01G545400 chr2A 95.775 71 2 1 302 372 740120335 740120266 3.350000e-21 113.0
30 TraesCS5D01G545400 chr2A 82.222 135 14 5 620 749 740080471 740080342 1.560000e-19 108.0
31 TraesCS5D01G545400 chr2A 82.222 135 14 5 620 749 740144501 740144372 1.560000e-19 108.0
32 TraesCS5D01G545400 chr2A 87.912 91 8 3 307 397 540777615 540777528 2.020000e-18 104.0
33 TraesCS5D01G545400 chr2A 77.027 148 15 13 620 757 540777594 540777456 2.650000e-07 67.6
34 TraesCS5D01G545400 chr2A 100.000 28 0 0 620 647 13250542 13250569 7.000000e-03 52.8
35 TraesCS5D01G545400 chr7D 83.077 130 15 3 306 433 53482400 53482276 1.210000e-20 111.0
36 TraesCS5D01G545400 chr1D 79.231 130 12 11 621 748 19563555 19563439 4.400000e-10 76.8
37 TraesCS5D01G545400 chr3D 95.455 44 2 0 620 663 7104556 7104599 2.050000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G545400 chr5D 554499825 554503926 4101 False 2608.000000 7576 92.452667 1 4102 3 chr5D.!!$F2 4101
1 TraesCS5D01G545400 chr5D 554478909 554480118 1209 False 767.000000 1151 88.681000 1224 2340 2 chr5D.!!$F1 1116
2 TraesCS5D01G545400 chr5B 696179171 696185242 6071 True 1480.250000 4327 85.909000 7 4102 4 chr5B.!!$R1 4095
3 TraesCS5D01G545400 chr4A 614030595 614035505 4910 True 1424.000000 3419 88.322667 46 4102 3 chr4A.!!$R4 4056
4 TraesCS5D01G545400 chr4A 614084310 614085199 889 True 1234.000000 1234 91.695000 1505 2394 1 chr4A.!!$R3 889
5 TraesCS5D01G545400 chr4A 614042488 614043377 889 True 1218.000000 1218 91.368000 1505 2394 1 chr4A.!!$R1 889
6 TraesCS5D01G545400 chr4A 614063397 614064286 889 True 1218.000000 1218 91.368000 1505 2394 1 chr4A.!!$R2 889
7 TraesCS5D01G545400 chr4A 614099003 614102958 3955 True 395.885714 1107 89.323000 1 2865 7 chr4A.!!$R5 2864

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
420 429 0.107897 TCATTGTCCCGTCCGAATGG 60.108 55.0 0.0 0.0 0.00 3.16 F
785 794 0.108615 CCGAAGACCGATGAAGCACT 60.109 55.0 0.0 0.0 41.76 4.40 F
831 840 0.179161 CGAGCACACTTAGCTACGCT 60.179 55.0 0.0 0.0 43.58 5.07 F
1983 3560 0.460311 CCAAGGACGAGCGTAAGGAT 59.540 55.0 0.0 0.0 38.28 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1875 3452 0.178767 CCTCGTTCATCTGGCCATCA 59.821 55.0 5.51 0.0 0.00 3.07 R
2430 7421 0.108585 AGGTGTGGTGCTCGATTGTT 59.891 50.0 0.00 0.0 0.00 2.83 R
2528 7519 0.459237 CCTCAGGACAGCATCGTCAC 60.459 60.0 0.00 0.0 37.66 3.67 R
3584 8659 1.089920 CAGCACCTTCTACACATGCC 58.910 55.0 0.00 0.0 36.96 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.887748 CCTTGAAAGCTCTCTTGTACAGA 58.112 43.478 0.00 0.00 31.78 3.41
23 24 5.300752 CCTTGAAAGCTCTCTTGTACAGAA 58.699 41.667 0.00 0.00 31.78 3.02
24 25 5.936956 CCTTGAAAGCTCTCTTGTACAGAAT 59.063 40.000 0.00 0.00 31.78 2.40
25 26 6.091986 CCTTGAAAGCTCTCTTGTACAGAATC 59.908 42.308 0.00 0.00 31.78 2.52
26 27 5.482908 TGAAAGCTCTCTTGTACAGAATCC 58.517 41.667 0.00 0.00 31.78 3.01
27 28 5.012046 TGAAAGCTCTCTTGTACAGAATCCA 59.988 40.000 0.00 0.00 31.78 3.41
28 29 4.734398 AGCTCTCTTGTACAGAATCCAG 57.266 45.455 0.00 0.00 0.00 3.86
29 30 3.450457 AGCTCTCTTGTACAGAATCCAGG 59.550 47.826 0.00 0.00 0.00 4.45
30 31 3.791245 CTCTCTTGTACAGAATCCAGGC 58.209 50.000 0.00 0.00 0.00 4.85
31 32 3.173151 TCTCTTGTACAGAATCCAGGCA 58.827 45.455 0.00 0.00 0.00 4.75
32 33 3.582647 TCTCTTGTACAGAATCCAGGCAA 59.417 43.478 0.00 0.00 0.00 4.52
33 34 4.041567 TCTCTTGTACAGAATCCAGGCAAA 59.958 41.667 0.00 0.00 0.00 3.68
34 35 4.326826 TCTTGTACAGAATCCAGGCAAAG 58.673 43.478 0.00 0.00 0.00 2.77
35 36 2.436417 TGTACAGAATCCAGGCAAAGC 58.564 47.619 0.00 0.00 0.00 3.51
36 37 2.040278 TGTACAGAATCCAGGCAAAGCT 59.960 45.455 0.00 0.00 0.00 3.74
37 38 2.299326 ACAGAATCCAGGCAAAGCTT 57.701 45.000 0.00 0.00 0.00 3.74
38 39 2.601905 ACAGAATCCAGGCAAAGCTTT 58.398 42.857 5.69 5.69 0.00 3.51
39 40 2.298163 ACAGAATCCAGGCAAAGCTTTG 59.702 45.455 30.70 30.70 41.03 2.77
40 41 2.298163 CAGAATCCAGGCAAAGCTTTGT 59.702 45.455 33.47 17.17 40.24 2.83
41 42 2.967887 AGAATCCAGGCAAAGCTTTGTT 59.032 40.909 33.47 21.65 40.24 2.83
42 43 3.006217 AGAATCCAGGCAAAGCTTTGTTC 59.994 43.478 33.47 26.85 40.24 3.18
43 44 2.071778 TCCAGGCAAAGCTTTGTTCT 57.928 45.000 33.47 27.51 40.24 3.01
44 45 1.682854 TCCAGGCAAAGCTTTGTTCTG 59.317 47.619 33.31 33.31 40.24 3.02
66 67 5.543714 TGCTGAACATGCAATTCTGAAAAT 58.456 33.333 19.02 0.00 37.51 1.82
74 75 8.075593 ACATGCAATTCTGAAAATTGTTACAC 57.924 30.769 11.03 0.00 39.25 2.90
81 82 5.361427 TCTGAAAATTGTTACACCGAGACA 58.639 37.500 0.00 0.00 0.00 3.41
90 91 1.800805 ACACCGAGACATTGCTCTTG 58.199 50.000 0.00 0.00 32.71 3.02
108 109 3.642755 GTGAGTTCACACGGCCAG 58.357 61.111 2.24 0.00 45.75 4.85
109 110 1.069090 GTGAGTTCACACGGCCAGA 59.931 57.895 2.24 0.00 45.75 3.86
110 111 0.531974 GTGAGTTCACACGGCCAGAA 60.532 55.000 2.24 0.00 45.75 3.02
112 113 1.202758 TGAGTTCACACGGCCAGAATT 60.203 47.619 2.24 0.00 0.00 2.17
113 114 1.464997 GAGTTCACACGGCCAGAATTC 59.535 52.381 2.24 0.00 0.00 2.17
114 115 1.072331 AGTTCACACGGCCAGAATTCT 59.928 47.619 2.24 0.88 0.00 2.40
115 116 1.197721 GTTCACACGGCCAGAATTCTG 59.802 52.381 25.75 25.75 43.40 3.02
117 118 1.071542 TCACACGGCCAGAATTCTGAA 59.928 47.619 32.49 7.98 46.59 3.02
118 119 1.879380 CACACGGCCAGAATTCTGAAA 59.121 47.619 32.49 0.00 46.59 2.69
120 121 2.749621 ACACGGCCAGAATTCTGAAATC 59.250 45.455 32.49 18.67 46.59 2.17
123 124 2.615912 CGGCCAGAATTCTGAAATCCTC 59.384 50.000 32.49 14.02 46.59 3.71
124 125 3.624777 GGCCAGAATTCTGAAATCCTCA 58.375 45.455 32.49 0.00 46.59 3.86
125 126 3.379688 GGCCAGAATTCTGAAATCCTCAC 59.620 47.826 32.49 12.07 46.59 3.51
126 127 4.012374 GCCAGAATTCTGAAATCCTCACA 58.988 43.478 32.49 0.00 46.59 3.58
127 128 4.142513 GCCAGAATTCTGAAATCCTCACAC 60.143 45.833 32.49 6.83 46.59 3.82
145 146 1.296867 CGAGCCGCGTTTTATGCAG 60.297 57.895 4.92 0.00 34.64 4.41
222 227 1.602311 AACTTGTGAAGGAGCAGCTG 58.398 50.000 10.11 10.11 0.00 4.24
258 267 2.566913 TGTGTTGTATCACACCACCAC 58.433 47.619 4.79 0.00 45.67 4.16
262 271 4.017126 TGTTGTATCACACCACCACAAAA 58.983 39.130 0.00 0.00 31.44 2.44
263 272 4.097135 TGTTGTATCACACCACCACAAAAG 59.903 41.667 0.00 0.00 31.44 2.27
264 273 2.621055 TGTATCACACCACCACAAAAGC 59.379 45.455 0.00 0.00 0.00 3.51
267 276 1.895798 TCACACCACCACAAAAGCAAA 59.104 42.857 0.00 0.00 0.00 3.68
271 280 3.070018 CACCACCACAAAAGCAAACAAA 58.930 40.909 0.00 0.00 0.00 2.83
272 281 3.688673 CACCACCACAAAAGCAAACAAAT 59.311 39.130 0.00 0.00 0.00 2.32
273 282 4.872691 CACCACCACAAAAGCAAACAAATA 59.127 37.500 0.00 0.00 0.00 1.40
275 284 6.703607 CACCACCACAAAAGCAAACAAATATA 59.296 34.615 0.00 0.00 0.00 0.86
276 285 7.225538 CACCACCACAAAAGCAAACAAATATAA 59.774 33.333 0.00 0.00 0.00 0.98
277 286 7.440856 ACCACCACAAAAGCAAACAAATATAAG 59.559 33.333 0.00 0.00 0.00 1.73
278 287 7.655328 CCACCACAAAAGCAAACAAATATAAGA 59.345 33.333 0.00 0.00 0.00 2.10
279 288 8.487176 CACCACAAAAGCAAACAAATATAAGAC 58.513 33.333 0.00 0.00 0.00 3.01
280 289 7.381139 ACCACAAAAGCAAACAAATATAAGACG 59.619 33.333 0.00 0.00 0.00 4.18
282 291 8.751335 CACAAAAGCAAACAAATATAAGACGTT 58.249 29.630 0.00 0.00 0.00 3.99
287 296 9.620660 AAGCAAACAAATATAAGACGTTTTAGG 57.379 29.630 4.75 0.00 0.00 2.69
288 297 8.789762 AGCAAACAAATATAAGACGTTTTAGGT 58.210 29.630 4.75 0.00 0.00 3.08
292 301 9.439500 AACAAATATAAGACGTTTTAGGTAGCA 57.561 29.630 4.75 0.00 0.00 3.49
293 302 9.439500 ACAAATATAAGACGTTTTAGGTAGCAA 57.561 29.630 4.75 0.00 0.00 3.91
295 304 9.662947 AAATATAAGACGTTTTAGGTAGCAAGT 57.337 29.630 4.75 0.00 0.00 3.16
296 305 6.963049 ATAAGACGTTTTAGGTAGCAAGTG 57.037 37.500 4.75 0.00 0.00 3.16
298 307 4.700700 AGACGTTTTAGGTAGCAAGTGTT 58.299 39.130 0.00 0.00 0.00 3.32
300 309 4.444536 ACGTTTTAGGTAGCAAGTGTTCA 58.555 39.130 0.00 0.00 0.00 3.18
301 310 4.877251 ACGTTTTAGGTAGCAAGTGTTCAA 59.123 37.500 0.00 0.00 0.00 2.69
302 311 5.529800 ACGTTTTAGGTAGCAAGTGTTCAAT 59.470 36.000 0.00 0.00 0.00 2.57
303 312 5.851177 CGTTTTAGGTAGCAAGTGTTCAATG 59.149 40.000 0.00 0.00 0.00 2.82
304 313 5.371115 TTTAGGTAGCAAGTGTTCAATGC 57.629 39.130 0.00 4.40 40.34 3.56
305 314 1.806542 AGGTAGCAAGTGTTCAATGCG 59.193 47.619 0.00 0.00 44.60 4.73
308 317 1.317613 AGCAAGTGTTCAATGCGGAA 58.682 45.000 0.00 0.00 44.60 4.30
309 318 1.680735 AGCAAGTGTTCAATGCGGAAA 59.319 42.857 0.00 0.00 44.60 3.13
310 319 2.297033 AGCAAGTGTTCAATGCGGAAAT 59.703 40.909 0.00 0.00 44.60 2.17
311 320 2.663119 GCAAGTGTTCAATGCGGAAATC 59.337 45.455 0.00 0.00 0.00 2.17
312 321 3.244976 CAAGTGTTCAATGCGGAAATCC 58.755 45.455 0.00 0.00 0.00 3.01
313 322 2.513753 AGTGTTCAATGCGGAAATCCA 58.486 42.857 0.00 0.00 35.14 3.41
314 323 3.091545 AGTGTTCAATGCGGAAATCCAT 58.908 40.909 0.00 0.00 35.14 3.41
315 324 3.511146 AGTGTTCAATGCGGAAATCCATT 59.489 39.130 0.00 0.00 35.14 3.16
317 326 4.690280 GTGTTCAATGCGGAAATCCATTTT 59.310 37.500 0.00 0.00 35.14 1.82
318 327 4.689812 TGTTCAATGCGGAAATCCATTTTG 59.310 37.500 0.00 0.45 35.14 2.44
320 329 2.937799 CAATGCGGAAATCCATTTTGGG 59.062 45.455 0.00 0.00 38.32 4.12
321 330 1.638529 TGCGGAAATCCATTTTGGGT 58.361 45.000 0.00 0.00 38.32 4.51
322 331 1.548269 TGCGGAAATCCATTTTGGGTC 59.452 47.619 0.00 0.00 38.32 4.46
323 332 1.824852 GCGGAAATCCATTTTGGGTCT 59.175 47.619 0.00 0.00 38.32 3.85
324 333 3.020984 GCGGAAATCCATTTTGGGTCTA 58.979 45.455 0.00 0.00 38.32 2.59
325 334 3.066760 GCGGAAATCCATTTTGGGTCTAG 59.933 47.826 0.00 0.00 38.32 2.43
326 335 3.632145 CGGAAATCCATTTTGGGTCTAGG 59.368 47.826 0.00 0.00 38.32 3.02
327 336 3.960755 GGAAATCCATTTTGGGTCTAGGG 59.039 47.826 0.00 0.00 38.32 3.53
331 340 1.284785 CCATTTTGGGTCTAGGGAGCA 59.715 52.381 0.00 0.00 41.29 4.26
332 341 2.369394 CATTTTGGGTCTAGGGAGCAC 58.631 52.381 0.00 0.00 41.29 4.40
333 342 1.440618 TTTTGGGTCTAGGGAGCACA 58.559 50.000 0.00 0.00 41.29 4.57
335 344 0.911769 TTGGGTCTAGGGAGCACATG 59.088 55.000 0.00 0.00 41.29 3.21
351 360 4.194660 TGCTCCTGCATGCCAAAA 57.805 50.000 16.68 0.00 45.31 2.44
352 361 2.438730 TGCTCCTGCATGCCAAAAA 58.561 47.368 16.68 0.00 45.31 1.94
353 362 0.978151 TGCTCCTGCATGCCAAAAAT 59.022 45.000 16.68 0.00 45.31 1.82
354 363 1.338294 TGCTCCTGCATGCCAAAAATG 60.338 47.619 16.68 0.09 45.31 2.32
355 364 2.010043 GCTCCTGCATGCCAAAAATGG 61.010 52.381 16.68 6.07 39.41 3.16
356 365 1.551430 CTCCTGCATGCCAAAAATGGA 59.449 47.619 16.68 9.87 0.00 3.41
357 366 2.169769 CTCCTGCATGCCAAAAATGGAT 59.830 45.455 16.68 0.00 0.00 3.41
358 367 2.572556 TCCTGCATGCCAAAAATGGATT 59.427 40.909 16.68 0.00 0.00 3.01
359 368 3.009253 TCCTGCATGCCAAAAATGGATTT 59.991 39.130 16.68 0.00 0.00 2.17
360 369 3.759618 CCTGCATGCCAAAAATGGATTTT 59.240 39.130 16.68 0.00 41.93 1.82
361 370 4.942483 CCTGCATGCCAAAAATGGATTTTA 59.058 37.500 16.68 0.00 39.20 1.52
362 371 5.163733 CCTGCATGCCAAAAATGGATTTTAC 60.164 40.000 16.68 0.00 39.20 2.01
363 372 5.311265 TGCATGCCAAAAATGGATTTTACA 58.689 33.333 16.68 0.00 39.20 2.41
364 373 5.766670 TGCATGCCAAAAATGGATTTTACAA 59.233 32.000 16.68 0.00 39.20 2.41
365 374 6.263842 TGCATGCCAAAAATGGATTTTACAAA 59.736 30.769 16.68 0.00 39.20 2.83
366 375 7.039923 TGCATGCCAAAAATGGATTTTACAAAT 60.040 29.630 16.68 0.00 39.20 2.32
367 376 7.273815 GCATGCCAAAAATGGATTTTACAAATG 59.726 33.333 6.36 3.23 39.20 2.32
368 377 7.814264 TGCCAAAAATGGATTTTACAAATGT 57.186 28.000 0.00 0.00 39.20 2.71
369 378 7.869800 TGCCAAAAATGGATTTTACAAATGTC 58.130 30.769 0.00 0.00 39.20 3.06
370 379 7.500227 TGCCAAAAATGGATTTTACAAATGTCA 59.500 29.630 0.00 0.00 39.20 3.58
371 380 8.348507 GCCAAAAATGGATTTTACAAATGTCAA 58.651 29.630 0.00 0.00 39.20 3.18
411 420 6.393990 TGGATGTTTTTAATTCATTGTCCCG 58.606 36.000 0.00 0.00 0.00 5.14
414 423 5.774630 TGTTTTTAATTCATTGTCCCGTCC 58.225 37.500 0.00 0.00 0.00 4.79
415 424 4.688511 TTTTAATTCATTGTCCCGTCCG 57.311 40.909 0.00 0.00 0.00 4.79
416 425 3.613494 TTAATTCATTGTCCCGTCCGA 57.387 42.857 0.00 0.00 0.00 4.55
417 426 2.483014 AATTCATTGTCCCGTCCGAA 57.517 45.000 0.00 0.00 0.00 4.30
420 429 0.107897 TCATTGTCCCGTCCGAATGG 60.108 55.000 0.00 0.00 0.00 3.16
421 430 1.451387 ATTGTCCCGTCCGAATGGC 60.451 57.895 0.00 0.00 34.14 4.40
423 432 2.818274 GTCCCGTCCGAATGGCAC 60.818 66.667 0.00 0.00 34.14 5.01
441 450 3.672867 GGCACATGAAAATTGTTACACCG 59.327 43.478 0.00 0.00 0.00 4.94
442 451 4.541779 GCACATGAAAATTGTTACACCGA 58.458 39.130 0.00 0.00 0.00 4.69
444 453 6.318628 GCACATGAAAATTGTTACACCGATA 58.681 36.000 0.00 0.00 0.00 2.92
445 454 6.250527 GCACATGAAAATTGTTACACCGATAC 59.749 38.462 0.00 0.00 0.00 2.24
446 455 7.301789 CACATGAAAATTGTTACACCGATACA 58.698 34.615 0.00 0.00 0.00 2.29
447 456 7.967854 CACATGAAAATTGTTACACCGATACAT 59.032 33.333 0.00 0.00 0.00 2.29
448 457 8.519526 ACATGAAAATTGTTACACCGATACATT 58.480 29.630 0.00 0.00 0.00 2.71
449 458 8.797215 CATGAAAATTGTTACACCGATACATTG 58.203 33.333 0.00 0.00 0.00 2.82
451 460 6.509418 AAATTGTTACACCGATACATTGCT 57.491 33.333 0.00 0.00 0.00 3.91
452 461 5.734855 ATTGTTACACCGATACATTGCTC 57.265 39.130 0.00 0.00 0.00 4.26
453 462 4.465632 TGTTACACCGATACATTGCTCT 57.534 40.909 0.00 0.00 0.00 4.09
454 463 4.827692 TGTTACACCGATACATTGCTCTT 58.172 39.130 0.00 0.00 0.00 2.85
456 465 2.632377 ACACCGATACATTGCTCTTGG 58.368 47.619 0.00 0.00 0.00 3.61
457 466 2.027192 ACACCGATACATTGCTCTTGGT 60.027 45.455 0.00 0.00 0.00 3.67
459 468 2.236146 ACCGATACATTGCTCTTGGTGA 59.764 45.455 0.00 0.00 0.00 4.02
460 469 3.118261 ACCGATACATTGCTCTTGGTGAT 60.118 43.478 0.00 0.00 0.00 3.06
461 470 3.879295 CCGATACATTGCTCTTGGTGATT 59.121 43.478 0.00 0.00 0.00 2.57
462 471 4.336433 CCGATACATTGCTCTTGGTGATTT 59.664 41.667 0.00 0.00 0.00 2.17
463 472 5.504665 CCGATACATTGCTCTTGGTGATTTC 60.505 44.000 0.00 0.00 0.00 2.17
464 473 5.065090 CGATACATTGCTCTTGGTGATTTCA 59.935 40.000 0.00 0.00 0.00 2.69
465 474 4.510038 ACATTGCTCTTGGTGATTTCAC 57.490 40.909 1.99 1.99 45.72 3.18
474 483 2.629002 GTGATTTCACACGGCCAGT 58.371 52.632 2.24 0.00 45.75 4.00
482 491 4.454948 CACGGCCAGTGTTCTGAA 57.545 55.556 16.51 0.00 45.51 3.02
483 492 2.701587 CACGGCCAGTGTTCTGAAA 58.298 52.632 16.51 0.00 45.51 2.69
484 493 1.238439 CACGGCCAGTGTTCTGAAAT 58.762 50.000 16.51 0.00 45.51 2.17
485 494 1.197721 CACGGCCAGTGTTCTGAAATC 59.802 52.381 16.51 0.00 45.51 2.17
486 495 0.804989 CGGCCAGTGTTCTGAAATCC 59.195 55.000 2.24 0.00 43.76 3.01
487 496 1.611673 CGGCCAGTGTTCTGAAATCCT 60.612 52.381 2.24 0.00 43.76 3.24
488 497 2.519013 GGCCAGTGTTCTGAAATCCTT 58.481 47.619 0.00 0.00 43.76 3.36
489 498 2.229784 GGCCAGTGTTCTGAAATCCTTG 59.770 50.000 0.00 0.00 43.76 3.61
490 499 2.352127 GCCAGTGTTCTGAAATCCTTGC 60.352 50.000 0.00 0.00 43.76 4.01
491 500 2.095567 CCAGTGTTCTGAAATCCTTGCG 60.096 50.000 0.00 0.00 43.76 4.85
492 501 2.095567 CAGTGTTCTGAAATCCTTGCGG 60.096 50.000 0.00 0.00 43.76 5.69
493 502 2.151202 GTGTTCTGAAATCCTTGCGGA 58.849 47.619 0.00 0.00 45.16 5.54
494 503 5.634282 CAGTGTTCTGAAATCCTTGCGGAT 61.634 45.833 0.00 0.00 46.55 4.18
495 504 7.055546 CAGTGTTCTGAAATCCTTGCGGATT 62.056 44.000 0.36 0.36 46.84 3.01
504 513 3.769739 TCCTTGCGGATTATATGCAGT 57.230 42.857 0.00 0.00 40.15 4.40
505 514 4.882842 TCCTTGCGGATTATATGCAGTA 57.117 40.909 0.00 0.00 40.15 2.74
506 515 5.420725 TCCTTGCGGATTATATGCAGTAT 57.579 39.130 0.00 0.00 40.15 2.12
507 516 5.804639 TCCTTGCGGATTATATGCAGTATT 58.195 37.500 0.00 0.00 40.15 1.89
508 517 6.237901 TCCTTGCGGATTATATGCAGTATTT 58.762 36.000 0.00 0.00 40.15 1.40
509 518 6.714810 TCCTTGCGGATTATATGCAGTATTTT 59.285 34.615 0.00 0.00 40.15 1.82
510 519 7.230510 TCCTTGCGGATTATATGCAGTATTTTT 59.769 33.333 0.00 0.00 40.15 1.94
553 562 9.973661 TTTTCTCTCCTGATATATTTGGTTTCA 57.026 29.630 5.28 0.00 0.00 2.69
556 565 9.784531 TCTCTCCTGATATATTTGGTTTCATTC 57.215 33.333 5.28 0.00 0.00 2.67
557 566 9.565090 CTCTCCTGATATATTTGGTTTCATTCA 57.435 33.333 5.28 0.00 0.00 2.57
558 567 9.565090 TCTCCTGATATATTTGGTTTCATTCAG 57.435 33.333 5.28 0.00 0.00 3.02
559 568 8.696043 TCCTGATATATTTGGTTTCATTCAGG 57.304 34.615 8.49 8.49 45.79 3.86
560 569 8.696043 CCTGATATATTTGGTTTCATTCAGGA 57.304 34.615 9.03 0.00 46.83 3.86
561 570 9.135189 CCTGATATATTTGGTTTCATTCAGGAA 57.865 33.333 9.03 0.00 46.83 3.36
567 576 7.790823 ATTTGGTTTCATTCAGGAAAACTTG 57.209 32.000 3.84 0.00 43.32 3.16
568 577 5.930837 TGGTTTCATTCAGGAAAACTTGT 57.069 34.783 3.84 0.00 43.32 3.16
569 578 5.659463 TGGTTTCATTCAGGAAAACTTGTG 58.341 37.500 3.84 0.00 43.32 3.33
570 579 5.420421 TGGTTTCATTCAGGAAAACTTGTGA 59.580 36.000 3.84 0.00 43.32 3.58
571 580 6.071108 TGGTTTCATTCAGGAAAACTTGTGAA 60.071 34.615 3.84 0.00 43.32 3.18
572 581 6.816140 GGTTTCATTCAGGAAAACTTGTGAAA 59.184 34.615 0.00 0.00 40.49 2.69
573 582 7.010460 GGTTTCATTCAGGAAAACTTGTGAAAG 59.990 37.037 6.51 0.00 40.49 2.62
574 583 7.403312 TTCATTCAGGAAAACTTGTGAAAGA 57.597 32.000 0.00 0.00 32.85 2.52
575 584 6.795399 TCATTCAGGAAAACTTGTGAAAGAC 58.205 36.000 0.00 0.00 32.85 3.01
576 585 6.376864 TCATTCAGGAAAACTTGTGAAAGACA 59.623 34.615 0.00 0.00 32.85 3.41
577 586 5.818136 TCAGGAAAACTTGTGAAAGACAG 57.182 39.130 0.00 0.00 35.44 3.51
578 587 4.096382 TCAGGAAAACTTGTGAAAGACAGC 59.904 41.667 0.00 0.00 35.44 4.40
579 588 4.096984 CAGGAAAACTTGTGAAAGACAGCT 59.903 41.667 0.00 0.00 35.44 4.24
580 589 4.096984 AGGAAAACTTGTGAAAGACAGCTG 59.903 41.667 13.48 13.48 35.44 4.24
581 590 3.427161 AAACTTGTGAAAGACAGCTGC 57.573 42.857 15.27 6.85 35.44 5.25
582 591 2.042686 ACTTGTGAAAGACAGCTGCA 57.957 45.000 15.27 0.00 35.44 4.41
583 592 2.579873 ACTTGTGAAAGACAGCTGCAT 58.420 42.857 15.27 0.00 35.44 3.96
584 593 3.743521 ACTTGTGAAAGACAGCTGCATA 58.256 40.909 15.27 0.00 35.44 3.14
585 594 4.136796 ACTTGTGAAAGACAGCTGCATAA 58.863 39.130 15.27 6.94 35.44 1.90
586 595 4.580167 ACTTGTGAAAGACAGCTGCATAAA 59.420 37.500 15.27 1.98 35.44 1.40
587 596 5.067674 ACTTGTGAAAGACAGCTGCATAAAA 59.932 36.000 15.27 0.00 35.44 1.52
588 597 5.112220 TGTGAAAGACAGCTGCATAAAAG 57.888 39.130 15.27 0.00 0.00 2.27
589 598 4.022935 TGTGAAAGACAGCTGCATAAAAGG 60.023 41.667 15.27 0.00 0.00 3.11
590 599 3.057315 TGAAAGACAGCTGCATAAAAGGC 60.057 43.478 15.27 0.00 0.00 4.35
591 600 2.503895 AGACAGCTGCATAAAAGGCT 57.496 45.000 15.27 0.00 35.23 4.58
592 601 2.800250 AGACAGCTGCATAAAAGGCTT 58.200 42.857 15.27 0.00 32.30 4.35
593 602 2.490903 AGACAGCTGCATAAAAGGCTTG 59.509 45.455 15.27 0.00 32.30 4.01
594 603 1.547372 ACAGCTGCATAAAAGGCTTGG 59.453 47.619 15.27 0.00 32.30 3.61
595 604 1.820519 CAGCTGCATAAAAGGCTTGGA 59.179 47.619 0.00 0.00 32.30 3.53
596 605 2.231964 CAGCTGCATAAAAGGCTTGGAA 59.768 45.455 0.00 0.00 32.30 3.53
597 606 2.232208 AGCTGCATAAAAGGCTTGGAAC 59.768 45.455 0.00 0.00 0.00 3.62
598 607 2.867429 CTGCATAAAAGGCTTGGAACG 58.133 47.619 0.00 0.00 0.00 3.95
599 608 2.228822 CTGCATAAAAGGCTTGGAACGT 59.771 45.455 0.00 0.00 0.00 3.99
600 609 2.030363 TGCATAAAAGGCTTGGAACGTG 60.030 45.455 0.00 0.00 0.00 4.49
601 610 2.030274 GCATAAAAGGCTTGGAACGTGT 60.030 45.455 0.00 0.00 0.00 4.49
602 611 3.552068 GCATAAAAGGCTTGGAACGTGTT 60.552 43.478 0.00 0.00 0.00 3.32
603 612 2.577449 AAAAGGCTTGGAACGTGTTG 57.423 45.000 0.00 0.00 0.00 3.33
604 613 1.470051 AAAGGCTTGGAACGTGTTGT 58.530 45.000 0.00 0.00 0.00 3.32
605 614 2.335316 AAGGCTTGGAACGTGTTGTA 57.665 45.000 0.00 0.00 0.00 2.41
606 615 2.561478 AGGCTTGGAACGTGTTGTAT 57.439 45.000 0.00 0.00 0.00 2.29
607 616 2.423577 AGGCTTGGAACGTGTTGTATC 58.576 47.619 0.00 0.00 0.00 2.24
608 617 2.147958 GGCTTGGAACGTGTTGTATCA 58.852 47.619 0.00 0.00 0.00 2.15
609 618 2.095919 GGCTTGGAACGTGTTGTATCAC 60.096 50.000 0.00 0.00 35.28 3.06
610 619 2.546368 GCTTGGAACGTGTTGTATCACA 59.454 45.455 0.00 0.00 38.12 3.58
611 620 3.606153 GCTTGGAACGTGTTGTATCACAC 60.606 47.826 0.00 0.00 43.23 3.82
612 621 2.485903 TGGAACGTGTTGTATCACACC 58.514 47.619 0.00 0.00 43.69 4.16
613 622 2.158943 TGGAACGTGTTGTATCACACCA 60.159 45.455 0.00 0.00 43.69 4.17
614 623 2.222445 GGAACGTGTTGTATCACACCAC 59.778 50.000 0.00 0.00 43.69 4.16
615 624 1.873698 ACGTGTTGTATCACACCACC 58.126 50.000 2.00 0.00 43.69 4.61
616 625 1.139256 ACGTGTTGTATCACACCACCA 59.861 47.619 2.00 0.00 43.69 4.17
617 626 1.529438 CGTGTTGTATCACACCACCAC 59.471 52.381 2.00 0.00 43.69 4.16
618 627 2.566913 GTGTTGTATCACACCACCACA 58.433 47.619 0.00 0.00 41.18 4.17
619 628 2.548057 GTGTTGTATCACACCACCACAG 59.452 50.000 0.00 0.00 41.18 3.66
620 629 2.436173 TGTTGTATCACACCACCACAGA 59.564 45.455 0.00 0.00 0.00 3.41
621 630 3.067106 GTTGTATCACACCACCACAGAG 58.933 50.000 0.00 0.00 0.00 3.35
622 631 1.001974 TGTATCACACCACCACAGAGC 59.998 52.381 0.00 0.00 0.00 4.09
623 632 1.001974 GTATCACACCACCACAGAGCA 59.998 52.381 0.00 0.00 0.00 4.26
624 633 0.250467 ATCACACCACCACAGAGCAC 60.250 55.000 0.00 0.00 0.00 4.40
625 634 1.153188 CACACCACCACAGAGCACA 60.153 57.895 0.00 0.00 0.00 4.57
626 635 0.535780 CACACCACCACAGAGCACAT 60.536 55.000 0.00 0.00 0.00 3.21
627 636 0.535780 ACACCACCACAGAGCACATG 60.536 55.000 0.00 0.00 0.00 3.21
628 637 1.601759 ACCACCACAGAGCACATGC 60.602 57.895 0.00 0.00 42.49 4.06
643 652 4.194660 TGCTCCTGCATGCCAAAA 57.805 50.000 16.68 0.00 45.31 2.44
644 653 2.438730 TGCTCCTGCATGCCAAAAA 58.561 47.368 16.68 0.00 45.31 1.94
645 654 0.978151 TGCTCCTGCATGCCAAAAAT 59.022 45.000 16.68 0.00 45.31 1.82
646 655 1.338294 TGCTCCTGCATGCCAAAAATG 60.338 47.619 16.68 0.09 45.31 2.32
647 656 2.010043 GCTCCTGCATGCCAAAAATGG 61.010 52.381 16.68 6.07 39.41 3.16
648 657 1.551430 CTCCTGCATGCCAAAAATGGA 59.449 47.619 16.68 9.87 0.00 3.41
649 658 2.169769 CTCCTGCATGCCAAAAATGGAT 59.830 45.455 16.68 0.00 0.00 3.41
650 659 2.572556 TCCTGCATGCCAAAAATGGATT 59.427 40.909 16.68 0.00 0.00 3.01
651 660 3.009253 TCCTGCATGCCAAAAATGGATTT 59.991 39.130 16.68 0.00 0.00 2.17
652 661 3.759618 CCTGCATGCCAAAAATGGATTTT 59.240 39.130 16.68 0.00 41.93 1.82
653 662 4.942483 CCTGCATGCCAAAAATGGATTTTA 59.058 37.500 16.68 0.00 39.20 1.52
654 663 5.163733 CCTGCATGCCAAAAATGGATTTTAC 60.164 40.000 16.68 0.00 39.20 2.01
655 664 5.311265 TGCATGCCAAAAATGGATTTTACA 58.689 33.333 16.68 0.00 39.20 2.41
656 665 5.766670 TGCATGCCAAAAATGGATTTTACAA 59.233 32.000 16.68 0.00 39.20 2.41
657 666 6.263842 TGCATGCCAAAAATGGATTTTACAAA 59.736 30.769 16.68 0.00 39.20 2.83
658 667 7.039923 TGCATGCCAAAAATGGATTTTACAAAT 60.040 29.630 16.68 0.00 39.20 2.32
659 668 8.457261 GCATGCCAAAAATGGATTTTACAAATA 58.543 29.630 6.36 0.00 39.20 1.40
662 671 9.730705 TGCCAAAAATGGATTTTACAAATATCA 57.269 25.926 0.00 0.00 39.20 2.15
698 707 9.603921 AATGGATGCTTTTAATTTATTGTCCTG 57.396 29.630 0.00 0.00 0.00 3.86
699 708 8.133024 TGGATGCTTTTAATTTATTGTCCTGT 57.867 30.769 0.00 0.00 0.00 4.00
700 709 8.592809 TGGATGCTTTTAATTTATTGTCCTGTT 58.407 29.630 0.00 0.00 0.00 3.16
701 710 9.087424 GGATGCTTTTAATTTATTGTCCTGTTC 57.913 33.333 0.00 0.00 0.00 3.18
702 711 8.687824 ATGCTTTTAATTTATTGTCCTGTTCG 57.312 30.769 0.00 0.00 0.00 3.95
703 712 7.877003 TGCTTTTAATTTATTGTCCTGTTCGA 58.123 30.769 0.00 0.00 0.00 3.71
704 713 8.353684 TGCTTTTAATTTATTGTCCTGTTCGAA 58.646 29.630 0.00 0.00 0.00 3.71
705 714 9.353999 GCTTTTAATTTATTGTCCTGTTCGAAT 57.646 29.630 0.00 0.00 0.00 3.34
707 716 9.632807 TTTTAATTTATTGTCCTGTTCGAATGG 57.367 29.630 0.00 7.49 0.00 3.16
708 717 6.834168 AATTTATTGTCCTGTTCGAATGGT 57.166 33.333 16.32 4.05 0.00 3.55
709 718 7.931578 AATTTATTGTCCTGTTCGAATGGTA 57.068 32.000 16.32 7.52 0.00 3.25
710 719 6.730960 TTTATTGTCCTGTTCGAATGGTAC 57.269 37.500 16.32 13.72 0.00 3.34
727 736 5.389859 TGGTACATGCAAATTTTCAGAGG 57.610 39.130 0.00 0.00 0.00 3.69
728 737 4.220382 TGGTACATGCAAATTTTCAGAGGG 59.780 41.667 0.00 0.00 0.00 4.30
729 738 4.462483 GGTACATGCAAATTTTCAGAGGGA 59.538 41.667 0.00 0.00 0.00 4.20
730 739 5.047377 GGTACATGCAAATTTTCAGAGGGAA 60.047 40.000 0.00 0.00 0.00 3.97
731 740 5.549742 ACATGCAAATTTTCAGAGGGAAA 57.450 34.783 0.00 0.00 43.59 3.13
742 751 6.976934 TTTCAGAGGGAAAACTTAAGCATT 57.023 33.333 1.29 0.00 42.37 3.56
743 752 6.976934 TTCAGAGGGAAAACTTAAGCATTT 57.023 33.333 1.29 4.48 30.98 2.32
744 753 6.976934 TCAGAGGGAAAACTTAAGCATTTT 57.023 33.333 1.29 2.96 0.00 1.82
745 754 6.748132 TCAGAGGGAAAACTTAAGCATTTTG 58.252 36.000 1.29 0.50 0.00 2.44
746 755 6.549364 TCAGAGGGAAAACTTAAGCATTTTGA 59.451 34.615 1.29 2.70 0.00 2.69
747 756 6.642540 CAGAGGGAAAACTTAAGCATTTTGAC 59.357 38.462 1.29 0.00 0.00 3.18
748 757 5.853936 AGGGAAAACTTAAGCATTTTGACC 58.146 37.500 1.29 7.67 0.00 4.02
749 758 4.994852 GGGAAAACTTAAGCATTTTGACCC 59.005 41.667 1.29 7.22 0.00 4.46
750 759 4.684242 GGAAAACTTAAGCATTTTGACCCG 59.316 41.667 1.29 0.00 0.00 5.28
751 760 4.929819 AAACTTAAGCATTTTGACCCGT 57.070 36.364 1.29 0.00 0.00 5.28
752 761 3.915437 ACTTAAGCATTTTGACCCGTG 57.085 42.857 1.29 0.00 0.00 4.94
753 762 3.482436 ACTTAAGCATTTTGACCCGTGA 58.518 40.909 1.29 0.00 0.00 4.35
754 763 3.886505 ACTTAAGCATTTTGACCCGTGAA 59.113 39.130 1.29 0.00 0.00 3.18
755 764 4.339814 ACTTAAGCATTTTGACCCGTGAAA 59.660 37.500 1.29 0.00 0.00 2.69
756 765 3.810310 AAGCATTTTGACCCGTGAAAA 57.190 38.095 0.00 0.00 30.84 2.29
757 766 3.369546 AGCATTTTGACCCGTGAAAAG 57.630 42.857 0.00 0.00 29.87 2.27
758 767 2.035832 AGCATTTTGACCCGTGAAAAGG 59.964 45.455 0.73 0.73 32.28 3.11
759 768 2.035321 GCATTTTGACCCGTGAAAAGGA 59.965 45.455 8.07 0.00 37.88 3.36
760 769 3.491792 GCATTTTGACCCGTGAAAAGGAA 60.492 43.478 8.07 0.00 37.88 3.36
761 770 4.688021 CATTTTGACCCGTGAAAAGGAAA 58.312 39.130 0.00 0.00 37.88 3.13
762 771 3.786516 TTTGACCCGTGAAAAGGAAAC 57.213 42.857 0.00 0.00 37.88 2.78
763 772 2.421751 TGACCCGTGAAAAGGAAACA 57.578 45.000 0.00 0.00 37.88 2.83
764 773 2.724454 TGACCCGTGAAAAGGAAACAA 58.276 42.857 0.00 0.00 37.88 2.83
765 774 2.685897 TGACCCGTGAAAAGGAAACAAG 59.314 45.455 0.00 0.00 37.88 3.16
766 775 1.407618 ACCCGTGAAAAGGAAACAAGC 59.592 47.619 0.00 0.00 37.88 4.01
767 776 1.269569 CCCGTGAAAAGGAAACAAGCC 60.270 52.381 0.00 0.00 37.88 4.35
768 777 1.599419 CCGTGAAAAGGAAACAAGCCG 60.599 52.381 0.00 0.00 37.88 5.52
769 778 1.332375 CGTGAAAAGGAAACAAGCCGA 59.668 47.619 0.00 0.00 0.00 5.54
770 779 2.223386 CGTGAAAAGGAAACAAGCCGAA 60.223 45.455 0.00 0.00 0.00 4.30
771 780 3.372060 GTGAAAAGGAAACAAGCCGAAG 58.628 45.455 0.00 0.00 0.00 3.79
772 781 3.066203 GTGAAAAGGAAACAAGCCGAAGA 59.934 43.478 0.00 0.00 0.00 2.87
773 782 3.066203 TGAAAAGGAAACAAGCCGAAGAC 59.934 43.478 0.00 0.00 0.00 3.01
774 783 1.605753 AAGGAAACAAGCCGAAGACC 58.394 50.000 0.00 0.00 0.00 3.85
775 784 0.602905 AGGAAACAAGCCGAAGACCG 60.603 55.000 0.00 0.00 38.18 4.79
776 785 0.601841 GGAAACAAGCCGAAGACCGA 60.602 55.000 0.00 0.00 41.76 4.69
777 786 1.439679 GAAACAAGCCGAAGACCGAT 58.560 50.000 0.00 0.00 41.76 4.18
778 787 1.128692 GAAACAAGCCGAAGACCGATG 59.871 52.381 0.00 0.00 41.76 3.84
779 788 0.320374 AACAAGCCGAAGACCGATGA 59.680 50.000 0.00 0.00 41.76 2.92
780 789 0.320374 ACAAGCCGAAGACCGATGAA 59.680 50.000 0.00 0.00 41.76 2.57
781 790 1.002366 CAAGCCGAAGACCGATGAAG 58.998 55.000 0.00 0.00 41.76 3.02
782 791 0.741221 AAGCCGAAGACCGATGAAGC 60.741 55.000 0.00 0.00 41.76 3.86
783 792 1.447838 GCCGAAGACCGATGAAGCA 60.448 57.895 0.00 0.00 41.76 3.91
785 794 0.108615 CCGAAGACCGATGAAGCACT 60.109 55.000 0.00 0.00 41.76 4.40
787 796 1.670087 CGAAGACCGATGAAGCACTGT 60.670 52.381 0.00 0.00 41.76 3.55
793 802 2.213499 CCGATGAAGCACTGTTATCCC 58.787 52.381 0.00 0.00 0.00 3.85
794 803 2.419990 CCGATGAAGCACTGTTATCCCA 60.420 50.000 0.00 0.00 0.00 4.37
797 806 5.240891 CGATGAAGCACTGTTATCCCATAT 58.759 41.667 0.00 0.00 0.00 1.78
800 809 5.368145 TGAAGCACTGTTATCCCATATGAC 58.632 41.667 3.65 0.00 0.00 3.06
801 810 5.104569 TGAAGCACTGTTATCCCATATGACA 60.105 40.000 3.65 0.00 0.00 3.58
802 811 5.573380 AGCACTGTTATCCCATATGACAT 57.427 39.130 3.65 0.00 0.00 3.06
803 812 5.311265 AGCACTGTTATCCCATATGACATG 58.689 41.667 3.65 0.00 0.00 3.21
806 815 6.262944 GCACTGTTATCCCATATGACATGAAA 59.737 38.462 3.65 0.00 0.00 2.69
812 821 9.683069 GTTATCCCATATGACATGAAAATTGTC 57.317 33.333 3.65 0.00 43.04 3.18
813 822 6.375945 TCCCATATGACATGAAAATTGTCG 57.624 37.500 3.65 0.00 45.14 4.35
819 828 3.563390 TGACATGAAAATTGTCGAGCACA 59.437 39.130 0.00 0.00 45.14 4.57
820 829 3.888934 ACATGAAAATTGTCGAGCACAC 58.111 40.909 0.00 0.00 33.41 3.82
821 830 3.565482 ACATGAAAATTGTCGAGCACACT 59.435 39.130 0.00 0.00 33.41 3.55
822 831 4.036734 ACATGAAAATTGTCGAGCACACTT 59.963 37.500 0.00 0.00 33.41 3.16
823 832 5.238432 ACATGAAAATTGTCGAGCACACTTA 59.762 36.000 0.00 0.00 33.41 2.24
824 833 5.342806 TGAAAATTGTCGAGCACACTTAG 57.657 39.130 0.00 0.00 33.41 2.18
825 834 3.813529 AAATTGTCGAGCACACTTAGC 57.186 42.857 0.00 0.00 33.41 3.09
826 835 2.751166 ATTGTCGAGCACACTTAGCT 57.249 45.000 0.00 0.00 46.82 3.32
827 836 3.868757 ATTGTCGAGCACACTTAGCTA 57.131 42.857 0.00 0.00 43.58 3.32
828 837 2.631418 TGTCGAGCACACTTAGCTAC 57.369 50.000 0.00 0.00 43.58 3.58
829 838 1.135774 TGTCGAGCACACTTAGCTACG 60.136 52.381 0.00 0.00 43.58 3.51
831 840 0.179161 CGAGCACACTTAGCTACGCT 60.179 55.000 0.00 0.00 43.58 5.07
832 841 1.063616 CGAGCACACTTAGCTACGCTA 59.936 52.381 0.00 0.00 43.58 4.26
833 842 2.477357 CGAGCACACTTAGCTACGCTAA 60.477 50.000 7.93 7.93 46.97 3.09
847 856 7.215719 AGCTACGCTAATATGAACATCTACA 57.784 36.000 0.00 0.00 36.99 2.74
848 857 7.658261 AGCTACGCTAATATGAACATCTACAA 58.342 34.615 0.00 0.00 36.99 2.41
849 858 8.141909 AGCTACGCTAATATGAACATCTACAAA 58.858 33.333 0.00 0.00 36.99 2.83
850 859 8.761497 GCTACGCTAATATGAACATCTACAAAA 58.239 33.333 0.00 0.00 0.00 2.44
933 2247 6.360681 GCACAAACATGTTGAATTCTGAGTAC 59.639 38.462 12.82 0.00 0.00 2.73
937 2251 5.869579 ACATGTTGAATTCTGAGTACAGGT 58.130 37.500 7.05 8.00 43.60 4.00
940 2254 5.541845 TGTTGAATTCTGAGTACAGGTCAG 58.458 41.667 7.05 4.60 43.60 3.51
953 2267 3.435275 ACAGGTCAGAAGTGCAGAGATA 58.565 45.455 0.00 0.00 0.00 1.98
955 2269 3.446873 CAGGTCAGAAGTGCAGAGATACT 59.553 47.826 0.00 0.00 0.00 2.12
982 2320 2.564553 ATCGAGCCGTTGCCACTCTC 62.565 60.000 0.00 0.00 38.69 3.20
983 2321 2.343758 GAGCCGTTGCCACTCTCA 59.656 61.111 3.31 0.00 38.69 3.27
986 2324 1.598130 GCCGTTGCCACTCTCACTT 60.598 57.895 0.00 0.00 0.00 3.16
988 2326 0.951040 CCGTTGCCACTCTCACTTCC 60.951 60.000 0.00 0.00 0.00 3.46
992 2330 3.740115 GTTGCCACTCTCACTTCCTTTA 58.260 45.455 0.00 0.00 0.00 1.85
1034 2404 2.436646 CATGTCCCGCGCCTTTCT 60.437 61.111 0.00 0.00 0.00 2.52
1090 2460 1.006571 TCGCTCCACACCGTCTTTC 60.007 57.895 0.00 0.00 0.00 2.62
1091 2461 1.006102 CGCTCCACACCGTCTTTCT 60.006 57.895 0.00 0.00 0.00 2.52
1322 2713 2.265424 GTACGTAAAGGCCGGCCA 59.735 61.111 45.13 24.88 38.92 5.36
1701 3278 1.002134 CCGTGCTGGGAAAGTGGAT 60.002 57.895 0.00 0.00 0.00 3.41
1874 3451 1.945394 GATGGTCACTGCTTATGCCAG 59.055 52.381 0.00 0.00 38.71 4.85
1875 3452 0.692476 TGGTCACTGCTTATGCCAGT 59.308 50.000 0.00 0.00 38.71 4.00
1914 3491 3.937706 AGGCTCAGAGATTGTTTGATTCG 59.062 43.478 0.00 0.00 0.00 3.34
1983 3560 0.460311 CCAAGGACGAGCGTAAGGAT 59.540 55.000 0.00 0.00 38.28 3.24
2065 3642 5.702670 ACATTGATCAGTGTCTTGGTTACAG 59.297 40.000 17.37 0.00 0.00 2.74
2407 7395 1.645455 CGGGCAATCTTCGCATCAG 59.355 57.895 0.00 0.00 0.00 2.90
2411 7399 1.739466 GGCAATCTTCGCATCAGTTCA 59.261 47.619 0.00 0.00 0.00 3.18
2454 7445 2.113986 GAGCACCACACCTGCCTT 59.886 61.111 0.00 0.00 35.01 4.35
2525 7516 1.959085 CCGCCATGCCATTGGATAC 59.041 57.895 6.95 0.00 39.25 2.24
2799 7791 1.882352 GCGAGGACCCACATGTTCTTT 60.882 52.381 0.00 0.00 0.00 2.52
2854 7846 2.713895 ATATGAGATGCTGGACGACG 57.286 50.000 0.00 0.00 0.00 5.12
2912 7905 3.181462 ACTGAAACAGTGTGAGCTGATCA 60.181 43.478 0.00 0.00 43.63 2.92
3024 8017 3.491276 CCACACACAATGCTTTGACACAT 60.491 43.478 18.35 0.00 36.64 3.21
3068 8130 4.681978 ACACGCTTGTCCCTCCGC 62.682 66.667 0.00 0.00 0.00 5.54
3072 8134 2.586792 GCTTGTCCCTCCGCTGAT 59.413 61.111 0.00 0.00 0.00 2.90
3149 8211 2.842394 CTAGAGCCCTGTGTGCACGG 62.842 65.000 13.13 8.29 37.44 4.94
3160 8230 0.396435 TGTGCACGGAACTCCTGAAT 59.604 50.000 13.13 0.00 0.00 2.57
3170 8240 3.244911 GGAACTCCTGAATTCCTGAACCA 60.245 47.826 2.27 0.00 41.13 3.67
3189 8259 4.536765 ACCACAAGAAATCTGGAACTGTT 58.463 39.130 0.00 0.00 0.00 3.16
3294 8364 1.730547 GCATGTTTGGTGCTGTCGC 60.731 57.895 0.00 0.00 39.45 5.19
3300 8370 0.527385 TTTGGTGCTGTCGCTTTTGC 60.527 50.000 0.00 0.00 43.23 3.68
3303 8373 2.012948 GTGCTGTCGCTTTTGCTGC 61.013 57.895 0.00 0.00 44.80 5.25
3326 8399 0.979709 TGCTGGAGATCTCACTGGGG 60.980 60.000 23.85 7.97 0.00 4.96
3328 8401 1.118838 CTGGAGATCTCACTGGGGTC 58.881 60.000 23.85 4.85 0.00 4.46
3344 8417 2.170166 GGGTCTGTTGGCAATCAATGA 58.830 47.619 1.92 0.00 37.73 2.57
3510 8585 0.329596 GAGGATGTTGCTCTTGGGGT 59.670 55.000 0.00 0.00 31.63 4.95
3539 8614 4.481930 TGCTGTGCTGTTGTTACATAAC 57.518 40.909 0.00 0.00 36.74 1.89
3578 8653 4.736611 AGATGGTCCATTGGCAATAGAT 57.263 40.909 13.23 0.00 0.00 1.98
3584 8659 3.003689 GTCCATTGGCAATAGATGAACCG 59.996 47.826 13.23 0.00 0.00 4.44
3598 8673 1.338674 TGAACCGGCATGTGTAGAAGG 60.339 52.381 0.00 0.00 0.00 3.46
3614 8689 0.672342 AAGGTGCTGCTGCTTTTCAG 59.328 50.000 17.00 0.00 45.62 3.02
3669 8777 5.254115 GGCCTGTGACTAGAAGGTATTTTT 58.746 41.667 0.00 0.00 33.34 1.94
3775 8888 1.143620 CTCAGAGCCAGGCAGCTAC 59.856 63.158 15.80 0.00 45.15 3.58
3777 8890 1.153409 CAGAGCCAGGCAGCTACTG 60.153 63.158 15.80 10.70 45.15 2.74
3778 8891 1.611851 AGAGCCAGGCAGCTACTGT 60.612 57.895 15.80 0.00 45.15 3.55
3779 8892 0.324738 AGAGCCAGGCAGCTACTGTA 60.325 55.000 15.80 0.00 45.15 2.74
3781 8894 1.139853 GAGCCAGGCAGCTACTGTATT 59.860 52.381 15.80 0.00 45.15 1.89
3782 8895 1.561542 AGCCAGGCAGCTACTGTATTT 59.438 47.619 15.80 0.00 42.70 1.40
3783 8896 1.943340 GCCAGGCAGCTACTGTATTTC 59.057 52.381 6.55 0.00 34.16 2.17
3784 8897 2.420687 GCCAGGCAGCTACTGTATTTCT 60.421 50.000 6.55 0.00 34.16 2.52
3785 8898 3.462021 CCAGGCAGCTACTGTATTTCTC 58.538 50.000 14.40 0.00 34.16 2.87
3786 8899 3.133721 CCAGGCAGCTACTGTATTTCTCT 59.866 47.826 14.40 0.00 34.16 3.10
3792 8905 6.256757 GGCAGCTACTGTATTTCTCTTACAAG 59.743 42.308 0.00 0.00 33.43 3.16
3808 8925 5.475564 TCTTACAAGGAAATGTAAAGTGGCC 59.524 40.000 0.00 0.00 43.21 5.36
3813 8930 5.213891 AGGAAATGTAAAGTGGCCAAAAG 57.786 39.130 7.24 0.00 0.00 2.27
3963 9080 5.245531 TGTGGATCTGGATTGTTGAACTAC 58.754 41.667 0.00 0.00 0.00 2.73
3998 9115 1.128692 GTGCCGTTTGCTGTCATAGAC 59.871 52.381 0.00 0.00 42.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.887748 TCTGTACAAGAGAGCTTTCAAGG 58.112 43.478 7.06 0.00 30.14 3.61
2 3 5.934625 GGATTCTGTACAAGAGAGCTTTCAA 59.065 40.000 7.06 0.00 35.91 2.69
4 5 5.482908 TGGATTCTGTACAAGAGAGCTTTC 58.517 41.667 0.00 0.00 35.91 2.62
5 6 5.486526 CTGGATTCTGTACAAGAGAGCTTT 58.513 41.667 0.00 0.00 35.91 3.51
6 7 4.081198 CCTGGATTCTGTACAAGAGAGCTT 60.081 45.833 0.00 0.00 35.91 3.74
7 8 3.450457 CCTGGATTCTGTACAAGAGAGCT 59.550 47.826 0.00 0.00 35.91 4.09
8 9 3.791245 CCTGGATTCTGTACAAGAGAGC 58.209 50.000 0.00 0.00 35.91 4.09
9 10 3.196469 TGCCTGGATTCTGTACAAGAGAG 59.804 47.826 0.00 0.00 35.91 3.20
10 11 3.173151 TGCCTGGATTCTGTACAAGAGA 58.827 45.455 0.00 0.00 35.91 3.10
11 12 3.616956 TGCCTGGATTCTGTACAAGAG 57.383 47.619 0.00 0.00 35.91 2.85
12 13 4.326826 CTTTGCCTGGATTCTGTACAAGA 58.673 43.478 0.00 0.00 0.00 3.02
13 14 3.119708 GCTTTGCCTGGATTCTGTACAAG 60.120 47.826 0.00 0.00 0.00 3.16
14 15 2.819608 GCTTTGCCTGGATTCTGTACAA 59.180 45.455 0.00 0.00 0.00 2.41
15 16 2.040278 AGCTTTGCCTGGATTCTGTACA 59.960 45.455 0.00 0.00 0.00 2.90
16 17 2.716217 AGCTTTGCCTGGATTCTGTAC 58.284 47.619 0.00 0.00 0.00 2.90
17 18 3.439857 AAGCTTTGCCTGGATTCTGTA 57.560 42.857 0.00 0.00 0.00 2.74
18 19 2.298163 CAAAGCTTTGCCTGGATTCTGT 59.702 45.455 25.26 0.00 0.00 3.41
19 20 2.298163 ACAAAGCTTTGCCTGGATTCTG 59.702 45.455 33.72 11.44 41.79 3.02
20 21 2.601905 ACAAAGCTTTGCCTGGATTCT 58.398 42.857 33.72 12.48 41.79 2.40
21 22 3.006217 AGAACAAAGCTTTGCCTGGATTC 59.994 43.478 33.72 26.76 41.79 2.52
22 23 2.967887 AGAACAAAGCTTTGCCTGGATT 59.032 40.909 33.72 21.37 41.79 3.01
23 24 2.298163 CAGAACAAAGCTTTGCCTGGAT 59.702 45.455 32.99 18.21 41.79 3.41
24 25 1.682854 CAGAACAAAGCTTTGCCTGGA 59.317 47.619 32.99 0.00 41.79 3.86
25 26 1.870993 GCAGAACAAAGCTTTGCCTGG 60.871 52.381 36.57 26.83 41.79 4.45
26 27 1.068127 AGCAGAACAAAGCTTTGCCTG 59.932 47.619 34.58 34.58 41.79 4.85
27 28 1.068127 CAGCAGAACAAAGCTTTGCCT 59.932 47.619 33.72 27.24 41.79 4.75
28 29 1.067516 TCAGCAGAACAAAGCTTTGCC 59.932 47.619 33.72 25.72 41.79 4.52
29 30 2.497107 TCAGCAGAACAAAGCTTTGC 57.503 45.000 33.72 22.83 41.79 3.68
40 41 3.822167 TCAGAATTGCATGTTCAGCAGAA 59.178 39.130 13.01 0.00 43.75 3.02
41 42 3.414269 TCAGAATTGCATGTTCAGCAGA 58.586 40.909 13.01 4.75 43.75 4.26
42 43 3.842732 TCAGAATTGCATGTTCAGCAG 57.157 42.857 13.01 2.99 43.75 4.24
43 44 4.587584 TTTCAGAATTGCATGTTCAGCA 57.412 36.364 13.01 0.00 40.85 4.41
44 45 6.073440 ACAATTTTCAGAATTGCATGTTCAGC 60.073 34.615 13.01 0.00 40.35 4.26
66 67 3.064207 GAGCAATGTCTCGGTGTAACAA 58.936 45.455 0.00 0.00 39.98 2.83
74 75 1.081892 CACCAAGAGCAATGTCTCGG 58.918 55.000 0.00 0.00 38.12 4.63
90 91 1.961277 CTGGCCGTGTGAACTCACC 60.961 63.158 7.37 0.00 45.88 4.02
108 109 4.201763 GCTCGTGTGAGGATTTCAGAATTC 60.202 45.833 0.00 0.00 42.79 2.17
109 110 3.686726 GCTCGTGTGAGGATTTCAGAATT 59.313 43.478 0.00 0.00 42.79 2.17
110 111 3.265791 GCTCGTGTGAGGATTTCAGAAT 58.734 45.455 0.00 0.00 42.79 2.40
112 113 1.066858 GGCTCGTGTGAGGATTTCAGA 60.067 52.381 0.00 0.00 42.79 3.27
113 114 1.363744 GGCTCGTGTGAGGATTTCAG 58.636 55.000 0.00 0.00 42.79 3.02
114 115 0.389817 CGGCTCGTGTGAGGATTTCA 60.390 55.000 0.00 0.00 42.79 2.69
115 116 1.696832 GCGGCTCGTGTGAGGATTTC 61.697 60.000 0.00 0.00 42.79 2.17
117 118 2.125512 GCGGCTCGTGTGAGGATT 60.126 61.111 0.00 0.00 42.79 3.01
118 119 4.498520 CGCGGCTCGTGTGAGGAT 62.499 66.667 0.00 0.00 42.79 3.24
127 128 1.296867 CTGCATAAAACGCGGCTCG 60.297 57.895 12.47 0.00 45.38 5.03
174 176 8.624776 CCTGAATGAAACCAAATATTAGGAGAC 58.375 37.037 0.00 0.00 0.00 3.36
222 227 3.874392 ACACATTCCAAGCCTTTATGC 57.126 42.857 0.00 0.00 0.00 3.14
262 271 8.789762 ACCTAAAACGTCTTATATTTGTTTGCT 58.210 29.630 0.00 0.00 33.42 3.91
263 272 8.959734 ACCTAAAACGTCTTATATTTGTTTGC 57.040 30.769 0.00 0.00 33.42 3.68
267 276 9.439500 TTGCTACCTAAAACGTCTTATATTTGT 57.561 29.630 0.00 0.00 0.00 2.83
271 280 8.255905 ACACTTGCTACCTAAAACGTCTTATAT 58.744 33.333 0.00 0.00 0.00 0.86
272 281 7.605449 ACACTTGCTACCTAAAACGTCTTATA 58.395 34.615 0.00 0.00 0.00 0.98
273 282 6.461640 ACACTTGCTACCTAAAACGTCTTAT 58.538 36.000 0.00 0.00 0.00 1.73
275 284 4.700700 ACACTTGCTACCTAAAACGTCTT 58.299 39.130 0.00 0.00 0.00 3.01
276 285 4.332428 ACACTTGCTACCTAAAACGTCT 57.668 40.909 0.00 0.00 0.00 4.18
277 286 4.508861 TGAACACTTGCTACCTAAAACGTC 59.491 41.667 0.00 0.00 0.00 4.34
278 287 4.444536 TGAACACTTGCTACCTAAAACGT 58.555 39.130 0.00 0.00 0.00 3.99
279 288 5.412526 TTGAACACTTGCTACCTAAAACG 57.587 39.130 0.00 0.00 0.00 3.60
280 289 5.629435 GCATTGAACACTTGCTACCTAAAAC 59.371 40.000 0.00 0.00 33.61 2.43
282 291 4.083537 CGCATTGAACACTTGCTACCTAAA 60.084 41.667 0.00 0.00 34.23 1.85
284 293 3.000041 CGCATTGAACACTTGCTACCTA 59.000 45.455 0.00 0.00 34.23 3.08
285 294 1.806542 CGCATTGAACACTTGCTACCT 59.193 47.619 0.00 0.00 34.23 3.08
286 295 1.135689 CCGCATTGAACACTTGCTACC 60.136 52.381 0.00 0.00 34.23 3.18
287 296 1.804151 TCCGCATTGAACACTTGCTAC 59.196 47.619 0.00 0.00 34.23 3.58
288 297 2.177394 TCCGCATTGAACACTTGCTA 57.823 45.000 0.00 0.00 34.23 3.49
289 298 1.317613 TTCCGCATTGAACACTTGCT 58.682 45.000 0.00 0.00 34.23 3.91
290 299 2.132740 TTTCCGCATTGAACACTTGC 57.867 45.000 0.00 0.00 0.00 4.01
291 300 3.244976 GGATTTCCGCATTGAACACTTG 58.755 45.455 0.00 0.00 0.00 3.16
292 301 2.890311 TGGATTTCCGCATTGAACACTT 59.110 40.909 0.00 0.00 39.43 3.16
293 302 2.513753 TGGATTTCCGCATTGAACACT 58.486 42.857 0.00 0.00 39.43 3.55
295 304 4.533919 AAATGGATTTCCGCATTGAACA 57.466 36.364 0.00 0.00 39.43 3.18
296 305 4.093261 CCAAAATGGATTTCCGCATTGAAC 59.907 41.667 8.69 0.00 40.96 3.18
298 307 3.369261 CCCAAAATGGATTTCCGCATTGA 60.369 43.478 0.00 0.00 40.96 2.57
300 309 2.571202 ACCCAAAATGGATTTCCGCATT 59.429 40.909 0.00 0.00 40.96 3.56
301 310 2.168313 GACCCAAAATGGATTTCCGCAT 59.832 45.455 0.00 0.00 40.96 4.73
302 311 1.548269 GACCCAAAATGGATTTCCGCA 59.452 47.619 0.00 0.00 40.96 5.69
303 312 1.824852 AGACCCAAAATGGATTTCCGC 59.175 47.619 0.00 0.00 40.96 5.54
304 313 3.632145 CCTAGACCCAAAATGGATTTCCG 59.368 47.826 0.00 0.00 40.96 4.30
305 314 3.960755 CCCTAGACCCAAAATGGATTTCC 59.039 47.826 0.00 0.00 40.96 3.13
308 317 3.373110 GCTCCCTAGACCCAAAATGGATT 60.373 47.826 0.00 0.00 40.96 3.01
309 318 2.175715 GCTCCCTAGACCCAAAATGGAT 59.824 50.000 0.00 0.00 40.96 3.41
310 319 1.564348 GCTCCCTAGACCCAAAATGGA 59.436 52.381 0.00 0.00 40.96 3.41
311 320 1.284785 TGCTCCCTAGACCCAAAATGG 59.715 52.381 0.00 0.00 37.25 3.16
312 321 2.290896 TGTGCTCCCTAGACCCAAAATG 60.291 50.000 0.00 0.00 0.00 2.32
313 322 1.992557 TGTGCTCCCTAGACCCAAAAT 59.007 47.619 0.00 0.00 0.00 1.82
314 323 1.440618 TGTGCTCCCTAGACCCAAAA 58.559 50.000 0.00 0.00 0.00 2.44
315 324 1.281867 CATGTGCTCCCTAGACCCAAA 59.718 52.381 0.00 0.00 0.00 3.28
317 326 1.626356 GCATGTGCTCCCTAGACCCA 61.626 60.000 0.00 0.00 38.21 4.51
318 327 1.147153 GCATGTGCTCCCTAGACCC 59.853 63.158 0.00 0.00 38.21 4.46
335 344 1.365699 CATTTTTGGCATGCAGGAGC 58.634 50.000 21.36 0.44 42.57 4.70
337 346 1.642112 TCCATTTTTGGCATGCAGGA 58.358 45.000 21.36 11.10 0.00 3.86
338 347 2.702592 ATCCATTTTTGGCATGCAGG 57.297 45.000 21.36 8.96 0.00 4.85
339 348 5.411977 TGTAAAATCCATTTTTGGCATGCAG 59.588 36.000 21.36 0.00 40.24 4.41
340 349 5.311265 TGTAAAATCCATTTTTGGCATGCA 58.689 33.333 21.36 2.54 40.24 3.96
341 350 5.876612 TGTAAAATCCATTTTTGGCATGC 57.123 34.783 9.90 9.90 40.24 4.06
342 351 8.298140 ACATTTGTAAAATCCATTTTTGGCATG 58.702 29.630 2.68 0.00 40.24 4.06
343 352 8.406730 ACATTTGTAAAATCCATTTTTGGCAT 57.593 26.923 2.68 0.00 40.24 4.40
344 353 7.500227 TGACATTTGTAAAATCCATTTTTGGCA 59.500 29.630 2.68 1.11 40.24 4.92
345 354 7.869800 TGACATTTGTAAAATCCATTTTTGGC 58.130 30.769 2.68 0.00 40.24 4.52
394 403 4.325119 TCGGACGGGACAATGAATTAAAA 58.675 39.130 0.00 0.00 0.00 1.52
396 405 3.613494 TCGGACGGGACAATGAATTAA 57.387 42.857 0.00 0.00 0.00 1.40
399 408 2.288666 CATTCGGACGGGACAATGAAT 58.711 47.619 0.00 0.00 0.00 2.57
401 410 0.107897 CCATTCGGACGGGACAATGA 60.108 55.000 5.70 0.00 0.00 2.57
403 412 1.451387 GCCATTCGGACGGGACAAT 60.451 57.895 0.00 0.00 0.00 2.71
404 413 2.046700 GCCATTCGGACGGGACAA 60.047 61.111 0.00 0.00 0.00 3.18
405 414 3.315140 TGCCATTCGGACGGGACA 61.315 61.111 0.00 0.00 0.00 4.02
407 416 2.665089 ATGTGCCATTCGGACGGGA 61.665 57.895 0.00 0.00 0.00 5.14
408 417 2.124736 ATGTGCCATTCGGACGGG 60.125 61.111 0.00 0.00 0.00 5.28
409 418 1.024046 TTCATGTGCCATTCGGACGG 61.024 55.000 0.00 0.00 0.00 4.79
411 420 3.508744 ATTTTCATGTGCCATTCGGAC 57.491 42.857 0.00 0.00 0.00 4.79
414 423 5.632764 TGTAACAATTTTCATGTGCCATTCG 59.367 36.000 0.00 0.00 0.00 3.34
415 424 6.128580 GGTGTAACAATTTTCATGTGCCATTC 60.129 38.462 0.00 0.00 39.98 2.67
416 425 5.700373 GGTGTAACAATTTTCATGTGCCATT 59.300 36.000 0.00 0.00 39.98 3.16
417 426 5.237048 GGTGTAACAATTTTCATGTGCCAT 58.763 37.500 0.00 0.00 39.98 4.40
420 429 4.541779 TCGGTGTAACAATTTTCATGTGC 58.458 39.130 0.00 0.00 39.98 4.57
421 430 7.301789 TGTATCGGTGTAACAATTTTCATGTG 58.698 34.615 0.00 0.00 39.98 3.21
423 432 8.797215 CAATGTATCGGTGTAACAATTTTCATG 58.203 33.333 0.00 0.00 39.98 3.07
425 434 6.804295 GCAATGTATCGGTGTAACAATTTTCA 59.196 34.615 0.00 0.00 39.98 2.69
426 435 7.027161 AGCAATGTATCGGTGTAACAATTTTC 58.973 34.615 0.00 0.00 39.98 2.29
428 437 6.374333 AGAGCAATGTATCGGTGTAACAATTT 59.626 34.615 0.00 0.00 39.98 1.82
429 438 5.880332 AGAGCAATGTATCGGTGTAACAATT 59.120 36.000 0.00 0.00 39.98 2.32
430 439 5.428253 AGAGCAATGTATCGGTGTAACAAT 58.572 37.500 0.00 0.00 39.98 2.71
432 441 4.465632 AGAGCAATGTATCGGTGTAACA 57.534 40.909 0.00 0.00 39.98 2.41
433 442 4.034048 CCAAGAGCAATGTATCGGTGTAAC 59.966 45.833 0.00 0.00 0.00 2.50
434 443 4.188462 CCAAGAGCAATGTATCGGTGTAA 58.812 43.478 0.00 0.00 0.00 2.41
435 444 3.196901 ACCAAGAGCAATGTATCGGTGTA 59.803 43.478 0.00 0.00 0.00 2.90
436 445 2.027192 ACCAAGAGCAATGTATCGGTGT 60.027 45.455 0.00 0.00 0.00 4.16
437 446 2.352651 CACCAAGAGCAATGTATCGGTG 59.647 50.000 0.00 0.00 36.98 4.94
439 448 2.905075 TCACCAAGAGCAATGTATCGG 58.095 47.619 0.00 0.00 0.00 4.18
441 450 6.127925 TGTGAAATCACCAAGAGCAATGTATC 60.128 38.462 10.83 0.00 45.88 2.24
442 451 5.711506 TGTGAAATCACCAAGAGCAATGTAT 59.288 36.000 10.83 0.00 45.88 2.29
444 453 3.890756 TGTGAAATCACCAAGAGCAATGT 59.109 39.130 10.83 0.00 45.88 2.71
445 454 4.232221 GTGTGAAATCACCAAGAGCAATG 58.768 43.478 10.83 0.00 45.88 2.82
446 455 3.058016 CGTGTGAAATCACCAAGAGCAAT 60.058 43.478 10.83 0.00 45.88 3.56
447 456 2.290367 CGTGTGAAATCACCAAGAGCAA 59.710 45.455 10.83 0.00 45.88 3.91
448 457 1.872952 CGTGTGAAATCACCAAGAGCA 59.127 47.619 10.83 0.00 45.88 4.26
449 458 1.197721 CCGTGTGAAATCACCAAGAGC 59.802 52.381 10.83 0.00 45.88 4.09
451 460 1.234821 GCCGTGTGAAATCACCAAGA 58.765 50.000 10.83 0.00 45.88 3.02
452 461 0.240945 GGCCGTGTGAAATCACCAAG 59.759 55.000 10.83 2.78 45.88 3.61
453 462 0.466372 TGGCCGTGTGAAATCACCAA 60.466 50.000 10.83 0.00 45.88 3.67
454 463 0.888736 CTGGCCGTGTGAAATCACCA 60.889 55.000 10.83 0.91 45.88 4.17
456 465 0.238289 CACTGGCCGTGTGAAATCAC 59.762 55.000 20.09 6.60 46.59 3.06
457 466 2.627791 CACTGGCCGTGTGAAATCA 58.372 52.632 20.09 0.00 38.84 2.57
466 475 1.523758 GATTTCAGAACACTGGCCGT 58.476 50.000 0.00 0.00 33.04 5.68
467 476 0.804989 GGATTTCAGAACACTGGCCG 59.195 55.000 0.00 0.00 33.04 6.13
468 477 2.206576 AGGATTTCAGAACACTGGCC 57.793 50.000 0.00 0.00 33.04 5.36
469 478 2.352127 GCAAGGATTTCAGAACACTGGC 60.352 50.000 0.00 0.00 33.04 4.85
470 479 2.095567 CGCAAGGATTTCAGAACACTGG 60.096 50.000 0.00 0.00 33.04 4.00
471 480 3.193157 CGCAAGGATTTCAGAACACTG 57.807 47.619 0.00 0.00 0.00 3.66
527 536 9.973661 TGAAACCAAATATATCAGGAGAGAAAA 57.026 29.630 9.68 0.00 0.00 2.29
530 539 9.784531 GAATGAAACCAAATATATCAGGAGAGA 57.215 33.333 9.68 0.00 0.00 3.10
531 540 9.565090 TGAATGAAACCAAATATATCAGGAGAG 57.435 33.333 9.68 0.00 0.00 3.20
532 541 9.565090 CTGAATGAAACCAAATATATCAGGAGA 57.435 33.333 9.68 0.00 0.00 3.71
541 550 9.492973 CAAGTTTTCCTGAATGAAACCAAATAT 57.507 29.630 0.00 0.00 34.13 1.28
542 551 8.482128 ACAAGTTTTCCTGAATGAAACCAAATA 58.518 29.630 0.00 0.00 34.13 1.40
543 552 7.280652 CACAAGTTTTCCTGAATGAAACCAAAT 59.719 33.333 0.00 0.00 34.13 2.32
544 553 6.593382 CACAAGTTTTCCTGAATGAAACCAAA 59.407 34.615 0.00 0.00 34.13 3.28
545 554 6.071108 TCACAAGTTTTCCTGAATGAAACCAA 60.071 34.615 0.00 0.00 34.13 3.67
546 555 5.420421 TCACAAGTTTTCCTGAATGAAACCA 59.580 36.000 0.00 0.00 34.13 3.67
547 556 5.901552 TCACAAGTTTTCCTGAATGAAACC 58.098 37.500 0.00 0.00 34.13 3.27
548 557 7.759433 TCTTTCACAAGTTTTCCTGAATGAAAC 59.241 33.333 0.00 0.00 34.13 2.78
549 558 7.759433 GTCTTTCACAAGTTTTCCTGAATGAAA 59.241 33.333 0.00 0.00 32.02 2.69
550 559 7.093988 TGTCTTTCACAAGTTTTCCTGAATGAA 60.094 33.333 0.00 0.00 32.02 2.57
551 560 6.376864 TGTCTTTCACAAGTTTTCCTGAATGA 59.623 34.615 0.00 0.00 29.30 2.57
552 561 6.563422 TGTCTTTCACAAGTTTTCCTGAATG 58.437 36.000 0.00 0.00 29.30 2.67
553 562 6.681368 GCTGTCTTTCACAAGTTTTCCTGAAT 60.681 38.462 0.00 0.00 33.31 2.57
554 563 5.393027 GCTGTCTTTCACAAGTTTTCCTGAA 60.393 40.000 0.00 0.00 33.31 3.02
555 564 4.096382 GCTGTCTTTCACAAGTTTTCCTGA 59.904 41.667 0.00 0.00 33.31 3.86
556 565 4.096984 AGCTGTCTTTCACAAGTTTTCCTG 59.903 41.667 0.00 0.00 33.31 3.86
557 566 4.096984 CAGCTGTCTTTCACAAGTTTTCCT 59.903 41.667 5.25 0.00 33.31 3.36
558 567 4.354587 CAGCTGTCTTTCACAAGTTTTCC 58.645 43.478 5.25 0.00 33.31 3.13
559 568 3.793492 GCAGCTGTCTTTCACAAGTTTTC 59.207 43.478 16.64 0.00 33.31 2.29
560 569 3.193267 TGCAGCTGTCTTTCACAAGTTTT 59.807 39.130 16.64 0.00 33.31 2.43
561 570 2.754552 TGCAGCTGTCTTTCACAAGTTT 59.245 40.909 16.64 0.00 33.31 2.66
562 571 2.368439 TGCAGCTGTCTTTCACAAGTT 58.632 42.857 16.64 0.00 33.31 2.66
563 572 2.042686 TGCAGCTGTCTTTCACAAGT 57.957 45.000 16.64 0.00 33.31 3.16
564 573 4.754372 TTATGCAGCTGTCTTTCACAAG 57.246 40.909 16.64 0.00 33.31 3.16
565 574 5.507817 CCTTTTATGCAGCTGTCTTTCACAA 60.508 40.000 16.64 0.00 33.31 3.33
566 575 4.022935 CCTTTTATGCAGCTGTCTTTCACA 60.023 41.667 16.64 2.74 0.00 3.58
567 576 4.479619 CCTTTTATGCAGCTGTCTTTCAC 58.520 43.478 16.64 0.00 0.00 3.18
568 577 3.057315 GCCTTTTATGCAGCTGTCTTTCA 60.057 43.478 16.64 4.35 0.00 2.69
569 578 3.192212 AGCCTTTTATGCAGCTGTCTTTC 59.808 43.478 16.64 0.00 33.41 2.62
570 579 3.160269 AGCCTTTTATGCAGCTGTCTTT 58.840 40.909 16.64 0.34 33.41 2.52
571 580 2.800250 AGCCTTTTATGCAGCTGTCTT 58.200 42.857 16.64 8.47 33.41 3.01
572 581 2.490903 CAAGCCTTTTATGCAGCTGTCT 59.509 45.455 16.64 5.47 35.30 3.41
573 582 2.416431 CCAAGCCTTTTATGCAGCTGTC 60.416 50.000 16.64 8.39 35.30 3.51
574 583 1.547372 CCAAGCCTTTTATGCAGCTGT 59.453 47.619 16.64 0.00 35.30 4.40
575 584 1.820519 TCCAAGCCTTTTATGCAGCTG 59.179 47.619 10.11 10.11 35.30 4.24
576 585 2.220653 TCCAAGCCTTTTATGCAGCT 57.779 45.000 0.00 0.00 37.10 4.24
577 586 2.610433 GTTCCAAGCCTTTTATGCAGC 58.390 47.619 0.00 0.00 0.00 5.25
578 587 2.228822 ACGTTCCAAGCCTTTTATGCAG 59.771 45.455 0.00 0.00 0.00 4.41
579 588 2.030363 CACGTTCCAAGCCTTTTATGCA 60.030 45.455 0.00 0.00 0.00 3.96
580 589 2.030274 ACACGTTCCAAGCCTTTTATGC 60.030 45.455 0.00 0.00 0.00 3.14
581 590 3.915437 ACACGTTCCAAGCCTTTTATG 57.085 42.857 0.00 0.00 0.00 1.90
582 591 3.634910 ACAACACGTTCCAAGCCTTTTAT 59.365 39.130 0.00 0.00 0.00 1.40
583 592 3.018149 ACAACACGTTCCAAGCCTTTTA 58.982 40.909 0.00 0.00 0.00 1.52
584 593 1.822371 ACAACACGTTCCAAGCCTTTT 59.178 42.857 0.00 0.00 0.00 2.27
585 594 1.470051 ACAACACGTTCCAAGCCTTT 58.530 45.000 0.00 0.00 0.00 3.11
586 595 2.335316 TACAACACGTTCCAAGCCTT 57.665 45.000 0.00 0.00 0.00 4.35
587 596 2.224426 TGATACAACACGTTCCAAGCCT 60.224 45.455 0.00 0.00 0.00 4.58
588 597 2.095919 GTGATACAACACGTTCCAAGCC 60.096 50.000 0.00 0.00 0.00 4.35
589 598 2.546368 TGTGATACAACACGTTCCAAGC 59.454 45.455 0.00 0.00 42.86 4.01
590 599 4.128554 GTGTGATACAACACGTTCCAAG 57.871 45.455 0.00 0.00 40.96 3.61
599 608 2.436173 TCTGTGGTGGTGTGATACAACA 59.564 45.455 0.00 0.00 44.73 3.33
600 609 3.067106 CTCTGTGGTGGTGTGATACAAC 58.933 50.000 0.00 0.00 36.06 3.32
601 610 2.549992 GCTCTGTGGTGGTGTGATACAA 60.550 50.000 0.00 0.00 0.00 2.41
602 611 1.001974 GCTCTGTGGTGGTGTGATACA 59.998 52.381 0.00 0.00 0.00 2.29
603 612 1.001974 TGCTCTGTGGTGGTGTGATAC 59.998 52.381 0.00 0.00 0.00 2.24
604 613 1.001974 GTGCTCTGTGGTGGTGTGATA 59.998 52.381 0.00 0.00 0.00 2.15
605 614 0.250467 GTGCTCTGTGGTGGTGTGAT 60.250 55.000 0.00 0.00 0.00 3.06
606 615 1.146041 GTGCTCTGTGGTGGTGTGA 59.854 57.895 0.00 0.00 0.00 3.58
607 616 0.535780 ATGTGCTCTGTGGTGGTGTG 60.536 55.000 0.00 0.00 0.00 3.82
608 617 0.535780 CATGTGCTCTGTGGTGGTGT 60.536 55.000 0.00 0.00 0.00 4.16
609 618 1.859427 GCATGTGCTCTGTGGTGGTG 61.859 60.000 0.00 0.00 38.21 4.17
610 619 1.601759 GCATGTGCTCTGTGGTGGT 60.602 57.895 0.00 0.00 38.21 4.16
611 620 3.271014 GCATGTGCTCTGTGGTGG 58.729 61.111 0.00 0.00 38.21 4.61
627 636 1.365699 CATTTTTGGCATGCAGGAGC 58.634 50.000 21.36 0.44 42.57 4.70
628 637 1.551430 TCCATTTTTGGCATGCAGGAG 59.449 47.619 21.36 1.94 0.00 3.69
629 638 1.642112 TCCATTTTTGGCATGCAGGA 58.358 45.000 21.36 11.10 0.00 3.86
630 639 2.702592 ATCCATTTTTGGCATGCAGG 57.297 45.000 21.36 8.96 0.00 4.85
631 640 5.411977 TGTAAAATCCATTTTTGGCATGCAG 59.588 36.000 21.36 0.00 40.24 4.41
632 641 5.311265 TGTAAAATCCATTTTTGGCATGCA 58.689 33.333 21.36 2.54 40.24 3.96
633 642 5.876612 TGTAAAATCCATTTTTGGCATGC 57.123 34.783 9.90 9.90 40.24 4.06
636 645 9.730705 TGATATTTGTAAAATCCATTTTTGGCA 57.269 25.926 2.68 0.00 40.24 4.92
672 681 9.603921 CAGGACAATAAATTAAAAGCATCCATT 57.396 29.630 0.00 0.00 0.00 3.16
673 682 8.761689 ACAGGACAATAAATTAAAAGCATCCAT 58.238 29.630 0.00 0.00 0.00 3.41
674 683 8.133024 ACAGGACAATAAATTAAAAGCATCCA 57.867 30.769 0.00 0.00 0.00 3.41
675 684 9.087424 GAACAGGACAATAAATTAAAAGCATCC 57.913 33.333 0.00 0.00 0.00 3.51
676 685 8.798153 CGAACAGGACAATAAATTAAAAGCATC 58.202 33.333 0.00 0.00 0.00 3.91
677 686 8.519526 TCGAACAGGACAATAAATTAAAAGCAT 58.480 29.630 0.00 0.00 0.00 3.79
678 687 7.877003 TCGAACAGGACAATAAATTAAAAGCA 58.123 30.769 0.00 0.00 0.00 3.91
679 688 8.736751 TTCGAACAGGACAATAAATTAAAAGC 57.263 30.769 0.00 0.00 0.00 3.51
681 690 9.632807 CCATTCGAACAGGACAATAAATTAAAA 57.367 29.630 12.01 0.00 0.00 1.52
682 691 8.798402 ACCATTCGAACAGGACAATAAATTAAA 58.202 29.630 21.59 0.00 0.00 1.52
683 692 8.343168 ACCATTCGAACAGGACAATAAATTAA 57.657 30.769 21.59 0.00 0.00 1.40
684 693 7.931578 ACCATTCGAACAGGACAATAAATTA 57.068 32.000 21.59 0.00 0.00 1.40
685 694 6.834168 ACCATTCGAACAGGACAATAAATT 57.166 33.333 21.59 0.00 0.00 1.82
686 695 6.882140 TGTACCATTCGAACAGGACAATAAAT 59.118 34.615 21.59 3.20 0.00 1.40
687 696 6.231951 TGTACCATTCGAACAGGACAATAAA 58.768 36.000 21.59 0.47 0.00 1.40
688 697 5.795972 TGTACCATTCGAACAGGACAATAA 58.204 37.500 21.59 0.00 0.00 1.40
689 698 5.408880 TGTACCATTCGAACAGGACAATA 57.591 39.130 21.59 4.49 0.00 1.90
690 699 4.280436 TGTACCATTCGAACAGGACAAT 57.720 40.909 21.59 5.33 0.00 2.71
691 700 3.755112 TGTACCATTCGAACAGGACAA 57.245 42.857 21.59 7.02 0.00 3.18
692 701 3.595173 CATGTACCATTCGAACAGGACA 58.405 45.455 21.59 18.22 0.00 4.02
693 702 2.351726 GCATGTACCATTCGAACAGGAC 59.648 50.000 21.59 13.62 0.00 3.85
694 703 2.027653 TGCATGTACCATTCGAACAGGA 60.028 45.455 21.59 1.39 0.00 3.86
695 704 2.355197 TGCATGTACCATTCGAACAGG 58.645 47.619 15.02 15.02 0.00 4.00
696 705 4.418013 TTTGCATGTACCATTCGAACAG 57.582 40.909 0.00 0.00 0.00 3.16
697 706 5.384063 AATTTGCATGTACCATTCGAACA 57.616 34.783 0.00 0.00 0.00 3.18
698 707 6.364706 TGAAAATTTGCATGTACCATTCGAAC 59.635 34.615 0.00 0.00 0.00 3.95
699 708 6.450545 TGAAAATTTGCATGTACCATTCGAA 58.549 32.000 0.00 0.00 0.00 3.71
700 709 6.018589 TGAAAATTTGCATGTACCATTCGA 57.981 33.333 0.00 0.00 0.00 3.71
701 710 6.092092 TCTGAAAATTTGCATGTACCATTCG 58.908 36.000 0.00 0.00 0.00 3.34
702 711 6.532657 CCTCTGAAAATTTGCATGTACCATTC 59.467 38.462 0.00 0.00 0.00 2.67
703 712 6.400568 CCTCTGAAAATTTGCATGTACCATT 58.599 36.000 0.00 0.00 0.00 3.16
704 713 5.105228 CCCTCTGAAAATTTGCATGTACCAT 60.105 40.000 0.00 0.00 0.00 3.55
705 714 4.220382 CCCTCTGAAAATTTGCATGTACCA 59.780 41.667 0.00 0.00 0.00 3.25
706 715 4.462483 TCCCTCTGAAAATTTGCATGTACC 59.538 41.667 0.00 0.00 0.00 3.34
707 716 5.643379 TCCCTCTGAAAATTTGCATGTAC 57.357 39.130 0.00 0.00 0.00 2.90
708 717 6.662865 TTTCCCTCTGAAAATTTGCATGTA 57.337 33.333 0.00 0.00 39.98 2.29
709 718 5.549742 TTTCCCTCTGAAAATTTGCATGT 57.450 34.783 0.00 0.00 39.98 3.21
719 728 6.976934 AATGCTTAAGTTTTCCCTCTGAAA 57.023 33.333 4.02 0.00 41.18 2.69
720 729 6.976934 AAATGCTTAAGTTTTCCCTCTGAA 57.023 33.333 4.02 0.00 0.00 3.02
721 730 6.549364 TCAAAATGCTTAAGTTTTCCCTCTGA 59.451 34.615 4.02 3.19 0.00 3.27
722 731 6.642540 GTCAAAATGCTTAAGTTTTCCCTCTG 59.357 38.462 4.02 1.13 0.00 3.35
723 732 6.239317 GGTCAAAATGCTTAAGTTTTCCCTCT 60.239 38.462 4.02 0.00 0.00 3.69
724 733 5.926542 GGTCAAAATGCTTAAGTTTTCCCTC 59.073 40.000 4.02 0.00 0.00 4.30
725 734 5.221641 GGGTCAAAATGCTTAAGTTTTCCCT 60.222 40.000 14.69 0.00 35.88 4.20
726 735 4.994852 GGGTCAAAATGCTTAAGTTTTCCC 59.005 41.667 4.02 7.98 33.36 3.97
727 736 4.684242 CGGGTCAAAATGCTTAAGTTTTCC 59.316 41.667 4.02 3.15 0.00 3.13
728 737 5.174943 CACGGGTCAAAATGCTTAAGTTTTC 59.825 40.000 4.02 0.00 0.00 2.29
729 738 5.047188 CACGGGTCAAAATGCTTAAGTTTT 58.953 37.500 4.02 1.36 0.00 2.43
730 739 4.339814 TCACGGGTCAAAATGCTTAAGTTT 59.660 37.500 4.02 0.00 0.00 2.66
731 740 3.886505 TCACGGGTCAAAATGCTTAAGTT 59.113 39.130 4.02 0.00 0.00 2.66
732 741 3.482436 TCACGGGTCAAAATGCTTAAGT 58.518 40.909 4.02 0.00 0.00 2.24
733 742 4.497473 TTCACGGGTCAAAATGCTTAAG 57.503 40.909 0.00 0.00 0.00 1.85
734 743 4.920640 TTTCACGGGTCAAAATGCTTAA 57.079 36.364 0.00 0.00 0.00 1.85
735 744 4.261825 CCTTTTCACGGGTCAAAATGCTTA 60.262 41.667 0.00 0.00 0.00 3.09
736 745 3.492482 CCTTTTCACGGGTCAAAATGCTT 60.492 43.478 0.00 0.00 0.00 3.91
737 746 2.035832 CCTTTTCACGGGTCAAAATGCT 59.964 45.455 0.00 0.00 0.00 3.79
738 747 2.035321 TCCTTTTCACGGGTCAAAATGC 59.965 45.455 0.00 0.00 0.00 3.56
739 748 4.314740 TTCCTTTTCACGGGTCAAAATG 57.685 40.909 0.00 0.00 0.00 2.32
740 749 4.160626 TGTTTCCTTTTCACGGGTCAAAAT 59.839 37.500 0.00 0.00 0.00 1.82
741 750 3.510360 TGTTTCCTTTTCACGGGTCAAAA 59.490 39.130 0.00 0.00 0.00 2.44
742 751 3.090037 TGTTTCCTTTTCACGGGTCAAA 58.910 40.909 0.00 0.00 0.00 2.69
743 752 2.724454 TGTTTCCTTTTCACGGGTCAA 58.276 42.857 0.00 0.00 0.00 3.18
744 753 2.421751 TGTTTCCTTTTCACGGGTCA 57.578 45.000 0.00 0.00 0.00 4.02
745 754 2.543031 GCTTGTTTCCTTTTCACGGGTC 60.543 50.000 0.00 0.00 0.00 4.46
746 755 1.407618 GCTTGTTTCCTTTTCACGGGT 59.592 47.619 0.00 0.00 0.00 5.28
747 756 1.269569 GGCTTGTTTCCTTTTCACGGG 60.270 52.381 0.00 0.00 0.00 5.28
748 757 1.599419 CGGCTTGTTTCCTTTTCACGG 60.599 52.381 0.00 0.00 0.00 4.94
749 758 1.332375 TCGGCTTGTTTCCTTTTCACG 59.668 47.619 0.00 0.00 0.00 4.35
750 759 3.066203 TCTTCGGCTTGTTTCCTTTTCAC 59.934 43.478 0.00 0.00 0.00 3.18
751 760 3.066203 GTCTTCGGCTTGTTTCCTTTTCA 59.934 43.478 0.00 0.00 0.00 2.69
752 761 3.550233 GGTCTTCGGCTTGTTTCCTTTTC 60.550 47.826 0.00 0.00 0.00 2.29
753 762 2.361119 GGTCTTCGGCTTGTTTCCTTTT 59.639 45.455 0.00 0.00 0.00 2.27
754 763 1.954382 GGTCTTCGGCTTGTTTCCTTT 59.046 47.619 0.00 0.00 0.00 3.11
755 764 1.605753 GGTCTTCGGCTTGTTTCCTT 58.394 50.000 0.00 0.00 0.00 3.36
756 765 0.602905 CGGTCTTCGGCTTGTTTCCT 60.603 55.000 0.00 0.00 34.75 3.36
757 766 0.601841 TCGGTCTTCGGCTTGTTTCC 60.602 55.000 0.00 0.00 39.77 3.13
758 767 1.128692 CATCGGTCTTCGGCTTGTTTC 59.871 52.381 0.00 0.00 39.77 2.78
759 768 1.156736 CATCGGTCTTCGGCTTGTTT 58.843 50.000 0.00 0.00 39.77 2.83
760 769 0.320374 TCATCGGTCTTCGGCTTGTT 59.680 50.000 0.00 0.00 39.77 2.83
761 770 0.320374 TTCATCGGTCTTCGGCTTGT 59.680 50.000 0.00 0.00 39.77 3.16
762 771 1.002366 CTTCATCGGTCTTCGGCTTG 58.998 55.000 0.00 0.00 39.77 4.01
763 772 0.741221 GCTTCATCGGTCTTCGGCTT 60.741 55.000 0.00 0.00 39.77 4.35
764 773 1.153549 GCTTCATCGGTCTTCGGCT 60.154 57.895 0.00 0.00 39.77 5.52
765 774 1.447838 TGCTTCATCGGTCTTCGGC 60.448 57.895 0.00 0.00 39.77 5.54
766 775 0.108615 AGTGCTTCATCGGTCTTCGG 60.109 55.000 0.00 0.00 39.77 4.30
767 776 0.994995 CAGTGCTTCATCGGTCTTCG 59.005 55.000 0.00 0.00 40.90 3.79
768 777 2.086054 ACAGTGCTTCATCGGTCTTC 57.914 50.000 0.00 0.00 0.00 2.87
769 778 2.550830 AACAGTGCTTCATCGGTCTT 57.449 45.000 0.00 0.00 0.00 3.01
770 779 3.430929 GGATAACAGTGCTTCATCGGTCT 60.431 47.826 0.00 0.00 0.00 3.85
771 780 2.866762 GGATAACAGTGCTTCATCGGTC 59.133 50.000 0.00 0.00 0.00 4.79
772 781 2.420129 GGGATAACAGTGCTTCATCGGT 60.420 50.000 0.00 0.00 0.00 4.69
773 782 2.213499 GGGATAACAGTGCTTCATCGG 58.787 52.381 0.00 0.00 0.00 4.18
774 783 2.905075 TGGGATAACAGTGCTTCATCG 58.095 47.619 0.00 0.00 0.00 3.84
775 784 6.148480 GTCATATGGGATAACAGTGCTTCATC 59.852 42.308 2.13 0.00 0.00 2.92
776 785 6.000219 GTCATATGGGATAACAGTGCTTCAT 59.000 40.000 2.13 0.00 0.00 2.57
777 786 5.104569 TGTCATATGGGATAACAGTGCTTCA 60.105 40.000 2.13 0.00 0.00 3.02
778 787 5.368145 TGTCATATGGGATAACAGTGCTTC 58.632 41.667 2.13 0.00 0.00 3.86
779 788 5.372343 TGTCATATGGGATAACAGTGCTT 57.628 39.130 2.13 0.00 0.00 3.91
780 789 5.072193 TCATGTCATATGGGATAACAGTGCT 59.928 40.000 2.13 0.00 0.00 4.40
781 790 5.308014 TCATGTCATATGGGATAACAGTGC 58.692 41.667 2.13 0.00 0.00 4.40
782 791 7.806409 TTTCATGTCATATGGGATAACAGTG 57.194 36.000 2.13 0.00 0.00 3.66
783 792 9.425248 AATTTTCATGTCATATGGGATAACAGT 57.575 29.630 2.13 0.00 0.00 3.55
785 794 9.199645 ACAATTTTCATGTCATATGGGATAACA 57.800 29.630 2.13 0.00 0.00 2.41
787 796 8.567104 CGACAATTTTCATGTCATATGGGATAA 58.433 33.333 2.13 0.00 45.90 1.75
793 802 6.412943 GTGCTCGACAATTTTCATGTCATATG 59.587 38.462 7.36 0.00 45.90 1.78
794 803 6.093909 TGTGCTCGACAATTTTCATGTCATAT 59.906 34.615 7.36 0.00 45.90 1.78
797 806 3.563390 TGTGCTCGACAATTTTCATGTCA 59.437 39.130 7.36 0.00 45.90 3.58
800 809 4.151258 AGTGTGCTCGACAATTTTCATG 57.849 40.909 0.00 0.00 35.91 3.07
801 810 4.836125 AAGTGTGCTCGACAATTTTCAT 57.164 36.364 0.00 0.00 39.87 2.57
802 811 4.319477 GCTAAGTGTGCTCGACAATTTTCA 60.319 41.667 0.00 0.00 39.87 2.69
803 812 4.083802 AGCTAAGTGTGCTCGACAATTTTC 60.084 41.667 0.00 0.00 39.87 2.29
806 815 3.045601 AGCTAAGTGTGCTCGACAATT 57.954 42.857 0.00 0.00 44.78 2.32
883 892 9.745323 GCAACAGAGCAAAATCAAAATAAATAC 57.255 29.630 0.00 0.00 0.00 1.89
884 893 9.486497 TGCAACAGAGCAAAATCAAAATAAATA 57.514 25.926 0.00 0.00 42.46 1.40
885 894 8.380743 TGCAACAGAGCAAAATCAAAATAAAT 57.619 26.923 0.00 0.00 42.46 1.40
886 895 7.279536 TGTGCAACAGAGCAAAATCAAAATAAA 59.720 29.630 0.00 0.00 45.67 1.40
887 896 6.760298 TGTGCAACAGAGCAAAATCAAAATAA 59.240 30.769 0.00 0.00 45.67 1.40
888 897 6.279123 TGTGCAACAGAGCAAAATCAAAATA 58.721 32.000 0.00 0.00 45.67 1.40
889 898 5.117584 TGTGCAACAGAGCAAAATCAAAAT 58.882 33.333 0.00 0.00 45.67 1.82
890 899 4.502016 TGTGCAACAGAGCAAAATCAAAA 58.498 34.783 0.00 0.00 45.67 2.44
891 900 4.120792 TGTGCAACAGAGCAAAATCAAA 57.879 36.364 0.00 0.00 45.67 2.69
892 901 3.797451 TGTGCAACAGAGCAAAATCAA 57.203 38.095 0.00 0.00 45.67 2.57
933 2247 3.446873 AGTATCTCTGCACTTCTGACCTG 59.553 47.826 0.00 0.00 0.00 4.00
953 2267 0.320771 ACGGCTCGATTTTCTGCAGT 60.321 50.000 14.67 0.00 0.00 4.40
955 2269 0.516877 CAACGGCTCGATTTTCTGCA 59.483 50.000 1.50 0.00 0.00 4.41
957 2271 0.179189 GGCAACGGCTCGATTTTCTG 60.179 55.000 1.50 0.00 40.87 3.02
959 2273 0.454452 GTGGCAACGGCTCGATTTTC 60.454 55.000 0.00 0.00 40.87 2.29
960 2274 0.889186 AGTGGCAACGGCTCGATTTT 60.889 50.000 0.00 0.00 40.87 1.82
982 2320 3.933332 GTCTGACGGGAATAAAGGAAGTG 59.067 47.826 0.00 0.00 0.00 3.16
983 2321 3.368116 CGTCTGACGGGAATAAAGGAAGT 60.368 47.826 21.78 0.00 38.08 3.01
986 2324 2.953466 CGTCTGACGGGAATAAAGGA 57.047 50.000 21.78 0.00 38.08 3.36
1081 2451 2.647158 GGAGGCGGAGAAAGACGGT 61.647 63.158 0.00 0.00 0.00 4.83
1288 2679 2.363711 TACCCGTCGAGCATCATGGC 62.364 60.000 0.00 0.00 33.17 4.40
1291 2682 1.359117 CGTACCCGTCGAGCATCAT 59.641 57.895 0.00 0.00 33.17 2.45
1309 2700 3.122971 GACGTGGCCGGCCTTTAC 61.123 66.667 43.34 32.07 35.50 2.01
1387 2778 2.722201 GGCAGTACCCGGAGACCAG 61.722 68.421 0.73 0.00 0.00 4.00
1433 2824 2.508891 GGCATCGCGTCGAACAGAG 61.509 63.158 5.77 0.00 39.99 3.35
1517 3094 4.821589 CGAACAGCTCCCTCGCCC 62.822 72.222 0.00 0.00 0.00 6.13
1701 3278 3.876589 GAACAGCCGAACCGCCTCA 62.877 63.158 0.00 0.00 0.00 3.86
1874 3451 1.293924 CTCGTTCATCTGGCCATCAC 58.706 55.000 5.51 0.00 0.00 3.06
1875 3452 0.178767 CCTCGTTCATCTGGCCATCA 59.821 55.000 5.51 0.00 0.00 3.07
1914 3491 1.508088 CAGGTTCTTTGCGGGCATC 59.492 57.895 0.00 0.00 0.00 3.91
2065 3642 3.928375 CCAACTTCAATTGTGCTATTGGC 59.072 43.478 5.13 0.00 36.41 4.52
2430 7421 0.108585 AGGTGTGGTGCTCGATTGTT 59.891 50.000 0.00 0.00 0.00 2.83
2454 7445 2.264480 CGGCCGAGGATGTCAACA 59.736 61.111 24.07 0.00 0.00 3.33
2525 7516 1.080501 AGGACAGCATCGTCACGTG 60.081 57.895 9.94 9.94 37.66 4.49
2526 7517 1.080501 CAGGACAGCATCGTCACGT 60.081 57.895 0.00 0.00 37.66 4.49
2528 7519 0.459237 CCTCAGGACAGCATCGTCAC 60.459 60.000 0.00 0.00 37.66 3.67
2799 7791 1.309013 ATGCCCCTGATCCCTGGAA 60.309 57.895 0.00 0.00 33.65 3.53
2854 7846 2.615227 ATCATCTGGGGGACAAGCGC 62.615 60.000 0.00 0.00 0.00 5.92
2934 7927 5.401033 AAAATCAAAGAGATCGATCAGCG 57.599 39.130 26.47 10.45 35.39 5.18
3024 8017 7.334671 CGTCCAGCTTCTCATATATCTGTACTA 59.665 40.741 0.00 0.00 0.00 1.82
3042 8104 2.356313 CAAGCGTGTCGTCCAGCT 60.356 61.111 0.00 0.00 42.35 4.24
3098 8160 5.855045 TCCTCTTTTCTGTCAGGAAAGTAC 58.145 41.667 26.25 0.00 36.69 2.73
3149 8211 3.753797 GTGGTTCAGGAATTCAGGAGTTC 59.246 47.826 7.93 0.00 0.00 3.01
3160 8230 4.141274 TCCAGATTTCTTGTGGTTCAGGAA 60.141 41.667 0.00 0.00 39.73 3.36
3170 8240 7.122650 TCTGAAAAACAGTTCCAGATTTCTTGT 59.877 33.333 8.27 0.00 45.86 3.16
3210 8280 7.655732 GTGTATATATCAGCACCAACACATACA 59.344 37.037 6.35 0.00 36.77 2.29
3211 8281 8.018677 GTGTATATATCAGCACCAACACATAC 57.981 38.462 6.35 0.00 36.77 2.39
3294 8364 2.049802 CAGCACCCGCAGCAAAAG 60.050 61.111 0.00 0.00 42.27 2.27
3300 8370 2.202987 GATCTCCAGCACCCGCAG 60.203 66.667 0.00 0.00 42.27 5.18
3303 8373 1.142748 GTGAGATCTCCAGCACCCG 59.857 63.158 20.03 0.00 0.00 5.28
3326 8399 5.472148 TGAATTCATTGATTGCCAACAGAC 58.528 37.500 3.38 0.00 37.63 3.51
3328 8401 5.716094 TCTGAATTCATTGATTGCCAACAG 58.284 37.500 8.96 0.00 37.63 3.16
3344 8417 7.344913 ACCTTCTCATGCTTTATCTCTGAATT 58.655 34.615 0.00 0.00 0.00 2.17
3510 8585 2.166050 ACAACAGCACAGCAACATTCAA 59.834 40.909 0.00 0.00 0.00 2.69
3539 8614 4.643784 CCATCTTTCAAAGATCCCTTCAGG 59.356 45.833 9.87 3.10 46.20 3.86
3578 8653 1.338674 CCTTCTACACATGCCGGTTCA 60.339 52.381 1.90 0.00 0.00 3.18
3584 8659 1.089920 CAGCACCTTCTACACATGCC 58.910 55.000 0.00 0.00 36.96 4.40
3614 8689 4.502645 GCTTTCAATGTTGTTGGTGTACAC 59.497 41.667 18.01 18.01 0.00 2.90
3669 8777 9.320352 GATTTAGTGGAGCAAAAAGGTTTAAAA 57.680 29.630 0.00 0.00 0.00 1.52
3673 8781 6.731292 AGATTTAGTGGAGCAAAAAGGTTT 57.269 33.333 0.00 0.00 0.00 3.27
3674 8782 6.731292 AAGATTTAGTGGAGCAAAAAGGTT 57.269 33.333 0.00 0.00 0.00 3.50
3749 8862 1.883544 CTGGCTCTGAGATGCTGCG 60.884 63.158 9.28 0.00 0.00 5.18
3781 8894 7.040686 GCCACTTTACATTTCCTTGTAAGAGAA 60.041 37.037 0.00 0.00 41.65 2.87
3782 8895 6.430000 GCCACTTTACATTTCCTTGTAAGAGA 59.570 38.462 0.00 0.00 41.65 3.10
3783 8896 6.349363 GGCCACTTTACATTTCCTTGTAAGAG 60.349 42.308 0.00 0.00 41.65 2.85
3784 8897 5.475564 GGCCACTTTACATTTCCTTGTAAGA 59.524 40.000 0.00 0.00 41.65 2.10
3785 8898 5.242838 TGGCCACTTTACATTTCCTTGTAAG 59.757 40.000 0.00 0.00 41.65 2.34
3786 8899 5.141182 TGGCCACTTTACATTTCCTTGTAA 58.859 37.500 0.00 0.00 39.63 2.41
3792 8905 4.039852 TCCTTTTGGCCACTTTACATTTCC 59.960 41.667 3.88 0.00 40.12 3.13
3808 8925 1.643310 TCTTTGGGGCCATCCTTTTG 58.357 50.000 4.39 0.00 35.33 2.44
3813 8930 1.342374 ACATCTTCTTTGGGGCCATCC 60.342 52.381 4.39 0.00 0.00 3.51
3963 9080 6.088483 GCAAACGGCACATAATAATCATCATG 59.912 38.462 0.00 0.00 43.97 3.07
3998 9115 7.539436 ACACACATGATGACTACTACTAGTTG 58.461 38.462 0.00 0.59 32.96 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.