Multiple sequence alignment - TraesCS5D01G544800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G544800 chr5D 100.000 4545 0 0 1 4545 554356761 554361305 0.000000e+00 8394.0
1 TraesCS5D01G544800 chr5D 91.704 446 34 3 1 444 477840891 477840447 2.320000e-172 616.0
2 TraesCS5D01G544800 chr5D 86.047 172 19 4 448 615 288324230 288324400 3.610000e-41 180.0
3 TraesCS5D01G544800 chr5D 86.458 96 11 2 521 615 164651157 164651251 2.240000e-18 104.0
4 TraesCS5D01G544800 chr4A 92.978 3532 153 27 806 4264 614247533 614244024 0.000000e+00 5060.0
5 TraesCS5D01G544800 chr4A 84.091 220 24 2 2946 3165 614245694 614245486 7.710000e-48 202.0
6 TraesCS5D01G544800 chr4A 92.661 109 7 1 448 555 472133155 472133263 6.090000e-34 156.0
7 TraesCS5D01G544800 chr4A 87.931 116 12 2 4393 4507 38657272 38657386 7.930000e-28 135.0
8 TraesCS5D01G544800 chr4A 87.931 116 13 1 4393 4507 467246485 467246600 7.930000e-28 135.0
9 TraesCS5D01G544800 chr4A 85.714 126 16 2 4383 4507 147650868 147650992 1.030000e-26 132.0
10 TraesCS5D01G544800 chr5B 89.814 3603 218 61 627 4109 696428013 696424440 0.000000e+00 4482.0
11 TraesCS5D01G544800 chr5B 80.583 206 22 8 4179 4367 696424398 696424194 4.740000e-30 143.0
12 TraesCS5D01G544800 chr5B 85.849 106 15 0 850 955 451432885 451432990 3.720000e-21 113.0
13 TraesCS5D01G544800 chr6D 93.289 447 23 4 1 444 412197912 412198354 0.000000e+00 652.0
14 TraesCS5D01G544800 chr6D 91.704 446 35 2 1 444 58746257 58745812 6.460000e-173 617.0
15 TraesCS5D01G544800 chr6D 91.441 444 36 2 2 444 126623141 126623583 3.890000e-170 608.0
16 TraesCS5D01G544800 chr6D 87.805 123 14 1 4386 4507 85797486 85797608 4.740000e-30 143.0
17 TraesCS5D01G544800 chr6D 87.069 116 14 1 4393 4507 125239659 125239774 3.690000e-26 130.0
18 TraesCS5D01G544800 chr6D 87.069 116 14 1 4393 4507 410395468 410395583 3.690000e-26 130.0
19 TraesCS5D01G544800 chr6D 85.833 120 12 3 4393 4510 87598710 87598594 6.170000e-24 122.0
20 TraesCS5D01G544800 chr6D 85.586 111 15 1 4393 4502 115788448 115788338 1.030000e-21 115.0
21 TraesCS5D01G544800 chr6D 91.026 78 5 2 4392 4468 350272408 350272332 2.240000e-18 104.0
22 TraesCS5D01G544800 chr6D 89.744 78 7 1 538 615 463217683 463217759 1.040000e-16 99.0
23 TraesCS5D01G544800 chr6D 89.610 77 6 2 4393 4468 130300957 130301032 3.740000e-16 97.1
24 TraesCS5D01G544800 chr6D 87.179 78 8 2 4392 4468 139320814 139320738 2.250000e-13 87.9
25 TraesCS5D01G544800 chr7D 92.825 446 29 3 1 444 158941656 158941212 1.070000e-180 643.0
26 TraesCS5D01G544800 chr7D 92.152 446 33 2 1 444 164484719 164484274 2.980000e-176 628.0
27 TraesCS5D01G544800 chr7D 91.704 446 35 2 1 444 164533710 164533265 6.460000e-173 617.0
28 TraesCS5D01G544800 chr7D 93.578 109 6 1 448 555 158940088 158939980 1.310000e-35 161.0
29 TraesCS5D01G544800 chr7D 82.418 182 14 8 448 615 528871893 528872070 4.740000e-30 143.0
30 TraesCS5D01G544800 chr7D 85.586 111 16 0 842 952 3226525 3226635 2.870000e-22 117.0
31 TraesCS5D01G544800 chr7D 83.505 97 12 4 521 615 91742416 91742510 2.250000e-13 87.9
32 TraesCS5D01G544800 chrUn 92.152 446 33 2 1 444 26919767 26919322 2.980000e-176 628.0
33 TraesCS5D01G544800 chrUn 91.509 106 7 2 448 552 18792296 18792400 1.320000e-30 145.0
34 TraesCS5D01G544800 chrUn 86.250 80 9 2 4390 4468 46249014 46249092 8.100000e-13 86.1
35 TraesCS5D01G544800 chrUn 86.420 81 8 3 4389 4468 355878531 355878609 8.100000e-13 86.1
36 TraesCS5D01G544800 chrUn 90.323 62 5 1 4407 4468 190888290 190888230 3.770000e-11 80.5
37 TraesCS5D01G544800 chr3D 92.135 445 33 2 1 443 260464921 260464477 1.070000e-175 627.0
38 TraesCS5D01G544800 chr3D 92.661 109 7 1 448 555 131232000 131231892 6.090000e-34 156.0
39 TraesCS5D01G544800 chr3D 86.792 106 12 2 857 960 187938614 187938509 2.870000e-22 117.0
40 TraesCS5D01G544800 chr4D 85.714 182 10 7 448 615 416624170 416624349 1.300000e-40 178.0
41 TraesCS5D01G544800 chr4D 91.228 114 8 2 4395 4507 323606093 323605981 2.190000e-33 154.0
42 TraesCS5D01G544800 chr4D 87.931 116 13 1 4393 4507 109275089 109274974 7.930000e-28 135.0
43 TraesCS5D01G544800 chr4B 91.228 114 8 2 4395 4507 404127679 404127567 2.190000e-33 154.0
44 TraesCS5D01G544800 chr4B 84.685 111 16 1 857 967 607845107 607844998 4.810000e-20 110.0
45 TraesCS5D01G544800 chr6B 92.453 106 6 2 448 552 584907853 584907957 2.830000e-32 150.0
46 TraesCS5D01G544800 chr6B 85.417 96 12 2 521 615 129448750 129448656 1.040000e-16 99.0
47 TraesCS5D01G544800 chr6B 82.857 105 14 4 513 615 683981807 683981705 1.740000e-14 91.6
48 TraesCS5D01G544800 chr1D 92.453 106 6 2 448 552 359605230 359605334 2.830000e-32 150.0
49 TraesCS5D01G544800 chr1D 86.726 113 14 1 4396 4507 465887258 465887146 1.720000e-24 124.0
50 TraesCS5D01G544800 chr1D 86.792 106 14 0 4402 4507 120536248 120536353 7.990000e-23 119.0
51 TraesCS5D01G544800 chr1D 87.379 103 11 2 850 952 169438583 169438483 2.870000e-22 117.0
52 TraesCS5D01G544800 chr2D 88.793 116 12 1 4393 4507 607675859 607675744 1.700000e-29 141.0
53 TraesCS5D01G544800 chr2D 81.771 192 10 11 448 615 403192010 403191820 2.210000e-28 137.0
54 TraesCS5D01G544800 chr2D 84.426 122 18 1 833 953 2479671 2479550 7.990000e-23 119.0
55 TraesCS5D01G544800 chr6A 86.992 123 15 1 4386 4507 103000121 103000243 2.210000e-28 137.0
56 TraesCS5D01G544800 chr6A 87.931 116 13 1 4393 4507 144266675 144266560 7.930000e-28 135.0
57 TraesCS5D01G544800 chr1A 89.524 105 8 2 448 551 336220270 336220372 3.690000e-26 130.0
58 TraesCS5D01G544800 chr2B 89.691 97 7 3 448 543 201178044 201178138 2.220000e-23 121.0
59 TraesCS5D01G544800 chr2B 85.714 105 13 2 857 961 373111299 373111197 4.810000e-20 110.0
60 TraesCS5D01G544800 chr3B 85.321 109 14 2 850 957 3262084 3262191 1.340000e-20 111.0
61 TraesCS5D01G544800 chr2A 88.608 79 8 1 4187 4264 372229040 372229118 1.350000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G544800 chr5D 554356761 554361305 4544 False 8394.0 8394 100.0000 1 4545 1 chr5D.!!$F3 4544
1 TraesCS5D01G544800 chr4A 614244024 614247533 3509 True 2631.0 5060 88.5345 806 4264 2 chr4A.!!$R1 3458
2 TraesCS5D01G544800 chr5B 696424194 696428013 3819 True 2312.5 4482 85.1985 627 4367 2 chr5B.!!$R1 3740
3 TraesCS5D01G544800 chr7D 158939980 158941656 1676 True 402.0 643 93.2015 1 555 2 chr7D.!!$R3 554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
604 605 0.036294 GCCCCCAGAGCCGATTATAC 60.036 60.000 0.00 0.00 0.0 1.47 F
617 618 0.108804 ATTATACCGCCGGCTCGATG 60.109 55.000 26.68 8.25 0.0 3.84 F
1484 1515 1.068127 CAACCCTAGATTACCCGACCG 59.932 57.143 0.00 0.00 0.0 4.79 F
1521 1561 2.047844 CACAGTCCCGTGCCTCAG 60.048 66.667 0.00 0.00 0.0 3.35 F
1570 1610 2.266689 CTAAACCCGACCCGGTGG 59.733 66.667 0.00 0.00 46.8 4.61 F
2417 2785 2.354805 GCTGAACAGGGGAAGTTATCGT 60.355 50.000 3.99 0.00 0.0 3.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2417 2785 1.278985 AGGATCACACCAATCGCTTCA 59.721 47.619 0.00 0.0 0.00 3.02 R
2600 3292 7.231925 TGACCACATACAACAGTTAACTCTCTA 59.768 37.037 4.77 0.0 0.00 2.43 R
2710 3405 0.365523 CGCGACATACGAAGGTGTTG 59.634 55.000 0.00 0.0 45.77 3.33 R
2712 3407 0.454600 ATCGCGACATACGAAGGTGT 59.545 50.000 12.93 0.0 43.71 4.16 R
3505 4238 1.355066 GGTTTGGCTCTCTTCGCTCG 61.355 60.000 0.00 0.0 0.00 5.03 R
4271 5078 0.528470 AGCTCTGCCTAGACGTTCAC 59.472 55.000 0.00 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 2.484651 GGAAAAGAGAGAAGGTTTCGCC 59.515 50.000 0.00 0.00 32.01 5.54
73 74 4.388499 CTTCCCACCACCGTCCGG 62.388 72.222 3.76 3.76 42.03 5.14
172 173 0.665835 TTTTGTTTGCTCGGCGATGT 59.334 45.000 11.27 0.00 0.00 3.06
176 177 1.076332 GTTTGCTCGGCGATGTACTT 58.924 50.000 11.27 0.00 0.00 2.24
181 182 0.866061 CTCGGCGATGTACTTGGACG 60.866 60.000 11.27 12.04 0.00 4.79
182 183 1.138036 CGGCGATGTACTTGGACGA 59.862 57.895 12.81 0.00 0.00 4.20
183 184 1.138047 CGGCGATGTACTTGGACGAC 61.138 60.000 12.81 3.81 0.00 4.34
184 185 1.138047 GGCGATGTACTTGGACGACG 61.138 60.000 0.00 0.00 0.00 5.12
185 186 0.179181 GCGATGTACTTGGACGACGA 60.179 55.000 0.00 0.00 0.00 4.20
186 187 1.811428 CGATGTACTTGGACGACGAG 58.189 55.000 0.00 0.00 36.60 4.18
187 188 1.395954 CGATGTACTTGGACGACGAGA 59.604 52.381 0.00 0.00 34.46 4.04
188 189 2.159612 CGATGTACTTGGACGACGAGAA 60.160 50.000 0.00 0.00 34.46 2.87
189 190 2.983402 TGTACTTGGACGACGAGAAG 57.017 50.000 0.00 2.85 34.46 2.85
190 191 1.068748 TGTACTTGGACGACGAGAAGC 60.069 52.381 0.00 0.00 34.46 3.86
192 193 2.430244 TTGGACGACGAGAAGCGC 60.430 61.111 0.00 0.00 46.04 5.92
193 194 2.804368 CTTGGACGACGAGAAGCGCT 62.804 60.000 2.64 2.64 46.04 5.92
194 195 2.577378 GGACGACGAGAAGCGCTC 60.577 66.667 12.06 4.30 46.04 5.03
213 214 4.880537 CGGCGCTGCTGTAGGAGG 62.881 72.222 7.64 0.00 33.79 4.30
214 215 3.461773 GGCGCTGCTGTAGGAGGA 61.462 66.667 7.64 0.00 33.79 3.71
215 216 2.579201 GCGCTGCTGTAGGAGGAA 59.421 61.111 0.00 0.00 33.79 3.36
216 217 1.520342 GCGCTGCTGTAGGAGGAAG 60.520 63.158 0.00 0.00 33.79 3.46
217 218 1.520342 CGCTGCTGTAGGAGGAAGC 60.520 63.158 2.57 0.00 37.46 3.86
218 219 1.153269 GCTGCTGTAGGAGGAAGCC 60.153 63.158 2.57 0.00 36.05 4.35
219 220 1.142748 CTGCTGTAGGAGGAAGCCG 59.857 63.158 0.00 0.00 36.05 5.52
220 221 1.304962 TGCTGTAGGAGGAAGCCGA 60.305 57.895 0.00 0.00 36.05 5.54
221 222 0.687757 TGCTGTAGGAGGAAGCCGAT 60.688 55.000 0.00 0.00 36.05 4.18
222 223 0.249657 GCTGTAGGAGGAAGCCGATG 60.250 60.000 0.00 0.00 0.00 3.84
223 224 0.249657 CTGTAGGAGGAAGCCGATGC 60.250 60.000 0.00 0.00 37.95 3.91
224 225 1.069935 GTAGGAGGAAGCCGATGCC 59.930 63.158 0.00 0.00 38.69 4.40
225 226 2.498941 TAGGAGGAAGCCGATGCCG 61.499 63.158 0.00 0.00 38.69 5.69
226 227 2.921853 TAGGAGGAAGCCGATGCCGA 62.922 60.000 0.00 0.00 38.69 5.54
227 228 2.586357 GAGGAAGCCGATGCCGAC 60.586 66.667 0.00 0.00 38.69 4.79
228 229 4.514577 AGGAAGCCGATGCCGACG 62.515 66.667 0.00 0.00 38.69 5.12
229 230 4.814294 GGAAGCCGATGCCGACGT 62.814 66.667 0.00 0.00 38.69 4.34
230 231 3.255379 GAAGCCGATGCCGACGTC 61.255 66.667 5.18 5.18 38.69 4.34
231 232 4.814294 AAGCCGATGCCGACGTCC 62.814 66.667 10.58 0.00 38.69 4.79
234 235 4.873129 CCGATGCCGACGTCCAGG 62.873 72.222 10.58 7.59 38.22 4.45
235 236 3.822192 CGATGCCGACGTCCAGGA 61.822 66.667 10.58 3.17 38.22 3.86
236 237 2.202756 GATGCCGACGTCCAGGAC 60.203 66.667 9.92 9.92 0.00 3.85
245 246 4.990288 GTCCAGGACGAGGAACAC 57.010 61.111 3.05 0.00 36.80 3.32
246 247 1.292541 GTCCAGGACGAGGAACACC 59.707 63.158 3.05 0.00 36.80 4.16
247 248 1.155390 TCCAGGACGAGGAACACCT 59.845 57.895 0.00 0.00 36.65 4.00
248 249 0.898789 TCCAGGACGAGGAACACCTC 60.899 60.000 6.24 6.24 44.71 3.85
258 259 3.442996 GAACACCTCATGGTCCTCG 57.557 57.895 0.00 0.00 46.60 4.63
259 260 0.741221 GAACACCTCATGGTCCTCGC 60.741 60.000 0.00 0.00 46.60 5.03
260 261 2.185310 AACACCTCATGGTCCTCGCC 62.185 60.000 0.00 0.00 46.60 5.54
261 262 3.461773 ACCTCATGGTCCTCGCCG 61.462 66.667 0.00 0.00 44.78 6.46
262 263 4.899239 CCTCATGGTCCTCGCCGC 62.899 72.222 0.00 0.00 0.00 6.53
263 264 4.899239 CTCATGGTCCTCGCCGCC 62.899 72.222 0.00 0.00 0.00 6.13
294 295 2.921996 CTCGCGAGCAATGAAAAGC 58.078 52.632 25.07 0.00 0.00 3.51
295 296 0.522076 CTCGCGAGCAATGAAAAGCC 60.522 55.000 25.07 0.00 0.00 4.35
296 297 1.864750 CGCGAGCAATGAAAAGCCG 60.865 57.895 0.00 0.00 0.00 5.52
297 298 2.154569 GCGAGCAATGAAAAGCCGC 61.155 57.895 0.00 0.00 40.86 6.53
298 299 1.864750 CGAGCAATGAAAAGCCGCG 60.865 57.895 0.00 0.00 0.00 6.46
299 300 1.514873 GAGCAATGAAAAGCCGCGG 60.515 57.895 24.05 24.05 0.00 6.46
300 301 3.181290 GCAATGAAAAGCCGCGGC 61.181 61.111 42.34 42.34 42.33 6.53
330 331 3.437795 CGCCTGGGCAGCTGAAAG 61.438 66.667 20.43 10.75 42.06 2.62
344 345 3.904136 CTGAAAGCAAAGAACCGACAT 57.096 42.857 0.00 0.00 0.00 3.06
345 346 3.814945 CTGAAAGCAAAGAACCGACATC 58.185 45.455 0.00 0.00 0.00 3.06
346 347 3.210227 TGAAAGCAAAGAACCGACATCA 58.790 40.909 0.00 0.00 0.00 3.07
347 348 3.820467 TGAAAGCAAAGAACCGACATCAT 59.180 39.130 0.00 0.00 0.00 2.45
348 349 4.083324 TGAAAGCAAAGAACCGACATCATC 60.083 41.667 0.00 0.00 0.00 2.92
349 350 3.340814 AGCAAAGAACCGACATCATCT 57.659 42.857 0.00 0.00 0.00 2.90
350 351 3.005554 AGCAAAGAACCGACATCATCTG 58.994 45.455 0.00 0.00 0.00 2.90
351 352 2.096496 GCAAAGAACCGACATCATCTGG 59.904 50.000 0.00 0.00 0.00 3.86
352 353 3.599343 CAAAGAACCGACATCATCTGGA 58.401 45.455 0.00 0.00 0.00 3.86
353 354 3.981071 AAGAACCGACATCATCTGGAA 57.019 42.857 0.00 0.00 0.00 3.53
354 355 3.533606 AGAACCGACATCATCTGGAAG 57.466 47.619 0.00 0.00 0.00 3.46
355 356 2.169352 AGAACCGACATCATCTGGAAGG 59.831 50.000 0.00 0.00 0.00 3.46
356 357 0.179000 ACCGACATCATCTGGAAGGC 59.821 55.000 0.00 0.00 0.00 4.35
357 358 0.467384 CCGACATCATCTGGAAGGCT 59.533 55.000 0.00 0.00 0.00 4.58
358 359 1.688735 CCGACATCATCTGGAAGGCTA 59.311 52.381 0.00 0.00 0.00 3.93
359 360 2.301296 CCGACATCATCTGGAAGGCTAT 59.699 50.000 0.00 0.00 0.00 2.97
360 361 3.244353 CCGACATCATCTGGAAGGCTATT 60.244 47.826 0.00 0.00 0.00 1.73
361 362 3.744942 CGACATCATCTGGAAGGCTATTG 59.255 47.826 0.00 0.00 0.00 1.90
362 363 3.484407 ACATCATCTGGAAGGCTATTGC 58.516 45.455 0.00 0.00 38.76 3.56
363 364 3.117776 ACATCATCTGGAAGGCTATTGCA 60.118 43.478 0.66 0.00 41.91 4.08
364 365 3.870538 TCATCTGGAAGGCTATTGCAT 57.129 42.857 0.66 0.00 41.91 3.96
365 366 3.483421 TCATCTGGAAGGCTATTGCATG 58.517 45.455 0.66 0.00 41.91 4.06
366 367 1.683943 TCTGGAAGGCTATTGCATGC 58.316 50.000 11.82 11.82 41.91 4.06
367 368 1.213678 TCTGGAAGGCTATTGCATGCT 59.786 47.619 20.33 1.26 41.91 3.79
368 369 1.607628 CTGGAAGGCTATTGCATGCTC 59.392 52.381 20.33 4.95 41.91 4.26
369 370 1.213678 TGGAAGGCTATTGCATGCTCT 59.786 47.619 20.33 8.52 41.91 4.09
370 371 2.439135 TGGAAGGCTATTGCATGCTCTA 59.561 45.455 20.33 9.25 41.91 2.43
371 372 2.810852 GGAAGGCTATTGCATGCTCTAC 59.189 50.000 20.33 4.54 41.91 2.59
372 373 3.495806 GGAAGGCTATTGCATGCTCTACT 60.496 47.826 20.33 6.80 41.91 2.57
373 374 3.399440 AGGCTATTGCATGCTCTACTC 57.601 47.619 20.33 4.97 41.91 2.59
374 375 2.038295 AGGCTATTGCATGCTCTACTCC 59.962 50.000 20.33 12.51 41.91 3.85
375 376 2.064762 GCTATTGCATGCTCTACTCCG 58.935 52.381 20.33 0.53 39.41 4.63
376 377 2.288457 GCTATTGCATGCTCTACTCCGA 60.288 50.000 20.33 0.00 39.41 4.55
377 378 2.231215 ATTGCATGCTCTACTCCGAC 57.769 50.000 20.33 0.00 0.00 4.79
378 379 1.186200 TTGCATGCTCTACTCCGACT 58.814 50.000 20.33 0.00 0.00 4.18
379 380 2.052782 TGCATGCTCTACTCCGACTA 57.947 50.000 20.33 0.00 0.00 2.59
380 381 1.676529 TGCATGCTCTACTCCGACTAC 59.323 52.381 20.33 0.00 0.00 2.73
381 382 1.950909 GCATGCTCTACTCCGACTACT 59.049 52.381 11.37 0.00 0.00 2.57
382 383 2.359531 GCATGCTCTACTCCGACTACTT 59.640 50.000 11.37 0.00 0.00 2.24
383 384 3.549221 GCATGCTCTACTCCGACTACTTC 60.549 52.174 11.37 0.00 0.00 3.01
391 392 3.823330 CGACTACTTCGCCGCCCT 61.823 66.667 0.00 0.00 41.87 5.19
392 393 2.104530 GACTACTTCGCCGCCCTC 59.895 66.667 0.00 0.00 0.00 4.30
393 394 3.427598 GACTACTTCGCCGCCCTCC 62.428 68.421 0.00 0.00 0.00 4.30
394 395 3.458163 CTACTTCGCCGCCCTCCA 61.458 66.667 0.00 0.00 0.00 3.86
395 396 3.718210 CTACTTCGCCGCCCTCCAC 62.718 68.421 0.00 0.00 0.00 4.02
407 408 4.662961 CTCCACTGCACGGCGACA 62.663 66.667 16.62 10.80 0.00 4.35
408 409 4.228567 TCCACTGCACGGCGACAA 62.229 61.111 16.62 0.00 0.00 3.18
409 410 3.276091 CCACTGCACGGCGACAAA 61.276 61.111 16.62 0.00 0.00 2.83
410 411 2.249309 CACTGCACGGCGACAAAG 59.751 61.111 16.62 8.01 0.00 2.77
411 412 2.203015 ACTGCACGGCGACAAAGT 60.203 55.556 16.62 8.71 0.00 2.66
412 413 2.249309 CTGCACGGCGACAAAGTG 59.751 61.111 16.62 0.04 38.77 3.16
413 414 2.512745 TGCACGGCGACAAAGTGT 60.513 55.556 16.62 0.00 38.10 3.55
414 415 2.047151 CTGCACGGCGACAAAGTGTT 62.047 55.000 16.62 0.00 38.10 3.32
415 416 1.063488 GCACGGCGACAAAGTGTTT 59.937 52.632 16.62 0.00 38.10 2.83
416 417 0.928451 GCACGGCGACAAAGTGTTTC 60.928 55.000 16.62 0.00 38.10 2.78
417 418 0.653323 CACGGCGACAAAGTGTTTCG 60.653 55.000 16.62 0.00 0.00 3.46
418 419 1.083015 CGGCGACAAAGTGTTTCGG 60.083 57.895 0.00 0.00 0.00 4.30
419 420 1.370051 GGCGACAAAGTGTTTCGGC 60.370 57.895 0.00 0.00 36.39 5.54
420 421 1.721133 GCGACAAAGTGTTTCGGCG 60.721 57.895 0.00 0.00 0.00 6.46
421 422 1.721133 CGACAAAGTGTTTCGGCGC 60.721 57.895 0.00 0.00 0.00 6.53
422 423 1.370051 GACAAAGTGTTTCGGCGCC 60.370 57.895 19.07 19.07 0.00 6.53
423 424 2.426752 CAAAGTGTTTCGGCGCCG 60.427 61.111 42.13 42.13 41.35 6.46
424 425 2.898343 AAAGTGTTTCGGCGCCGT 60.898 55.556 44.16 24.92 40.74 5.68
425 426 2.474612 AAAGTGTTTCGGCGCCGTT 61.475 52.632 44.16 29.07 40.74 4.44
426 427 1.159098 AAAGTGTTTCGGCGCCGTTA 61.159 50.000 44.16 31.35 40.74 3.18
427 428 0.952010 AAGTGTTTCGGCGCCGTTAT 60.952 50.000 44.16 24.05 40.74 1.89
428 429 1.059838 GTGTTTCGGCGCCGTTATC 59.940 57.895 44.16 30.95 40.74 1.75
429 430 2.318696 GTTTCGGCGCCGTTATCG 59.681 61.111 44.16 21.50 40.74 2.92
446 447 2.125106 GGATGAGCCGAAAGCCGT 60.125 61.111 0.00 0.00 45.47 5.68
447 448 1.745489 GGATGAGCCGAAAGCCGTT 60.745 57.895 0.00 0.00 45.47 4.44
448 449 0.461339 GGATGAGCCGAAAGCCGTTA 60.461 55.000 0.00 0.00 45.47 3.18
449 450 1.583054 GATGAGCCGAAAGCCGTTAT 58.417 50.000 0.00 0.00 45.47 1.89
450 451 1.261619 GATGAGCCGAAAGCCGTTATG 59.738 52.381 0.00 0.00 45.47 1.90
451 452 0.036765 TGAGCCGAAAGCCGTTATGT 60.037 50.000 0.00 0.00 45.47 2.29
452 453 0.373716 GAGCCGAAAGCCGTTATGTG 59.626 55.000 0.00 0.00 45.47 3.21
453 454 0.036765 AGCCGAAAGCCGTTATGTGA 60.037 50.000 0.00 0.00 45.47 3.58
454 455 1.014352 GCCGAAAGCCGTTATGTGAT 58.986 50.000 0.00 0.00 36.31 3.06
455 456 2.159014 AGCCGAAAGCCGTTATGTGATA 60.159 45.455 0.00 0.00 45.47 2.15
456 457 2.610374 GCCGAAAGCCGTTATGTGATAA 59.390 45.455 0.00 0.00 36.31 1.75
457 458 3.064271 GCCGAAAGCCGTTATGTGATAAA 59.936 43.478 0.00 0.00 36.31 1.40
458 459 4.437659 GCCGAAAGCCGTTATGTGATAAAA 60.438 41.667 0.00 0.00 36.31 1.52
459 460 5.632959 CCGAAAGCCGTTATGTGATAAAAA 58.367 37.500 0.00 0.00 36.31 1.94
483 484 8.460831 AAAATTACTTATGTTGAATTCACGCC 57.539 30.769 7.89 0.00 0.00 5.68
484 485 3.740044 ACTTATGTTGAATTCACGCCG 57.260 42.857 7.89 0.00 0.00 6.46
485 486 3.331150 ACTTATGTTGAATTCACGCCGA 58.669 40.909 7.89 0.00 0.00 5.54
486 487 3.749088 ACTTATGTTGAATTCACGCCGAA 59.251 39.130 7.89 0.00 38.22 4.30
487 488 2.611974 ATGTTGAATTCACGCCGAAC 57.388 45.000 7.89 3.12 36.12 3.95
488 489 0.589223 TGTTGAATTCACGCCGAACC 59.411 50.000 7.89 0.00 36.12 3.62
489 490 0.589223 GTTGAATTCACGCCGAACCA 59.411 50.000 7.89 0.00 36.12 3.67
490 491 0.589223 TTGAATTCACGCCGAACCAC 59.411 50.000 7.89 0.00 36.12 4.16
491 492 1.131826 GAATTCACGCCGAACCACG 59.868 57.895 0.00 0.00 36.12 4.94
501 502 3.916061 CGAACCACGGCAAATATGG 57.084 52.632 0.00 0.00 39.57 2.74
502 503 0.380378 CGAACCACGGCAAATATGGG 59.620 55.000 0.00 0.00 37.86 4.00
503 504 0.102300 GAACCACGGCAAATATGGGC 59.898 55.000 0.00 0.00 37.86 5.36
504 505 1.326951 AACCACGGCAAATATGGGCC 61.327 55.000 0.00 0.00 46.80 5.80
510 511 0.240945 GGCAAATATGGGCCGATTCG 59.759 55.000 5.24 0.00 40.93 3.34
511 512 0.387239 GCAAATATGGGCCGATTCGC 60.387 55.000 5.24 0.00 0.00 4.70
512 513 0.110238 CAAATATGGGCCGATTCGCG 60.110 55.000 5.24 0.00 40.47 5.87
513 514 1.852067 AAATATGGGCCGATTCGCGC 61.852 55.000 5.24 0.00 41.78 6.86
514 515 4.980805 TATGGGCCGATTCGCGCC 62.981 66.667 22.60 22.60 40.78 6.53
519 520 3.764049 GCCGATTCGCGCCGATAC 61.764 66.667 14.90 0.00 39.11 2.24
520 521 3.103911 CCGATTCGCGCCGATACC 61.104 66.667 14.90 0.00 39.11 2.73
521 522 3.458579 CGATTCGCGCCGATACCG 61.459 66.667 0.00 3.34 35.23 4.02
532 533 3.936585 CGATACCGGGCCATTTTTG 57.063 52.632 6.32 0.00 0.00 2.44
533 534 0.248866 CGATACCGGGCCATTTTTGC 60.249 55.000 6.32 0.00 0.00 3.68
541 542 1.708822 GGCCATTTTTGCCGTAAGTG 58.291 50.000 0.00 0.00 39.48 3.16
542 543 1.671556 GGCCATTTTTGCCGTAAGTGG 60.672 52.381 0.00 0.00 39.48 4.00
543 544 1.671556 GCCATTTTTGCCGTAAGTGGG 60.672 52.381 0.00 0.00 0.00 4.61
549 550 2.358984 GCCGTAAGTGGGCCGAAA 60.359 61.111 0.00 0.00 44.97 3.46
550 551 1.967494 GCCGTAAGTGGGCCGAAAA 60.967 57.895 0.00 0.00 44.97 2.29
551 552 1.918868 GCCGTAAGTGGGCCGAAAAG 61.919 60.000 0.00 0.00 44.97 2.27
552 553 0.604511 CCGTAAGTGGGCCGAAAAGT 60.605 55.000 0.00 0.00 0.00 2.66
553 554 0.515564 CGTAAGTGGGCCGAAAAGTG 59.484 55.000 0.00 0.00 0.00 3.16
554 555 0.879090 GTAAGTGGGCCGAAAAGTGG 59.121 55.000 0.00 0.00 0.00 4.00
560 561 4.404654 GCCGAAAAGTGGCGCCTG 62.405 66.667 29.70 8.19 43.70 4.85
561 562 3.737172 CCGAAAAGTGGCGCCTGG 61.737 66.667 29.70 13.45 0.00 4.45
562 563 3.737172 CGAAAAGTGGCGCCTGGG 61.737 66.667 29.70 5.90 0.00 4.45
563 564 3.373565 GAAAAGTGGCGCCTGGGG 61.374 66.667 29.70 6.36 0.00 4.96
592 593 4.419921 GTACCCAACCGCCCCCAG 62.420 72.222 0.00 0.00 0.00 4.45
593 594 4.660611 TACCCAACCGCCCCCAGA 62.661 66.667 0.00 0.00 0.00 3.86
601 602 3.546543 CGCCCCCAGAGCCGATTA 61.547 66.667 0.00 0.00 0.00 1.75
602 603 2.883828 CGCCCCCAGAGCCGATTAT 61.884 63.158 0.00 0.00 0.00 1.28
603 604 1.541310 CGCCCCCAGAGCCGATTATA 61.541 60.000 0.00 0.00 0.00 0.98
604 605 0.036294 GCCCCCAGAGCCGATTATAC 60.036 60.000 0.00 0.00 0.00 1.47
605 606 0.613777 CCCCCAGAGCCGATTATACC 59.386 60.000 0.00 0.00 0.00 2.73
606 607 0.246635 CCCCAGAGCCGATTATACCG 59.753 60.000 0.00 0.00 0.00 4.02
607 608 0.389948 CCCAGAGCCGATTATACCGC 60.390 60.000 0.00 0.00 0.00 5.68
608 609 0.389948 CCAGAGCCGATTATACCGCC 60.390 60.000 0.00 0.00 0.00 6.13
609 610 0.732880 CAGAGCCGATTATACCGCCG 60.733 60.000 0.00 0.00 0.00 6.46
610 611 1.445582 GAGCCGATTATACCGCCGG 60.446 63.158 0.00 0.00 44.34 6.13
612 613 2.654877 CCGATTATACCGCCGGCT 59.345 61.111 26.68 9.55 35.29 5.52
613 614 1.445582 CCGATTATACCGCCGGCTC 60.446 63.158 26.68 12.39 35.29 4.70
614 615 1.800315 CGATTATACCGCCGGCTCG 60.800 63.158 26.68 20.74 0.00 5.03
615 616 1.582968 GATTATACCGCCGGCTCGA 59.417 57.895 26.68 9.38 0.00 4.04
616 617 0.172803 GATTATACCGCCGGCTCGAT 59.827 55.000 26.68 16.30 0.00 3.59
617 618 0.108804 ATTATACCGCCGGCTCGATG 60.109 55.000 26.68 8.25 0.00 3.84
618 619 2.758770 TTATACCGCCGGCTCGATGC 62.759 60.000 26.68 0.00 41.94 3.91
622 623 3.966104 CGCCGGCTCGATGCTCTA 61.966 66.667 26.68 0.00 42.39 2.43
623 624 2.417516 GCCGGCTCGATGCTCTAA 59.582 61.111 22.15 0.00 42.39 2.10
624 625 1.227263 GCCGGCTCGATGCTCTAAA 60.227 57.895 22.15 0.00 42.39 1.85
625 626 1.491505 GCCGGCTCGATGCTCTAAAC 61.492 60.000 22.15 0.00 42.39 2.01
630 631 2.622436 GCTCGATGCTCTAAACAGGTT 58.378 47.619 0.00 0.00 38.95 3.50
639 640 3.623510 GCTCTAAACAGGTTGGTCTATGC 59.376 47.826 0.00 0.00 0.00 3.14
640 641 4.832248 CTCTAAACAGGTTGGTCTATGCA 58.168 43.478 0.00 0.00 0.00 3.96
642 643 5.815581 TCTAAACAGGTTGGTCTATGCATT 58.184 37.500 3.54 0.00 0.00 3.56
647 648 4.021192 ACAGGTTGGTCTATGCATTTTTGG 60.021 41.667 3.54 0.00 0.00 3.28
651 652 2.830923 TGGTCTATGCATTTTTGGTGGG 59.169 45.455 3.54 0.00 0.00 4.61
655 656 4.096984 GTCTATGCATTTTTGGTGGGAGAG 59.903 45.833 3.54 0.00 0.00 3.20
666 667 3.454858 TGGTGGGAGAGATAAAGCTTCT 58.545 45.455 0.00 0.00 0.00 2.85
667 668 4.620723 TGGTGGGAGAGATAAAGCTTCTA 58.379 43.478 0.00 0.00 0.00 2.10
681 682 4.373348 AGCTTCTAAAGTCGCTTCGTAT 57.627 40.909 0.00 0.00 0.00 3.06
693 694 3.064408 TCGCTTCGTATGACTCGTGTTAT 59.936 43.478 0.47 0.47 0.00 1.89
696 697 4.796830 GCTTCGTATGACTCGTGTTATTCA 59.203 41.667 0.00 0.00 0.00 2.57
706 707 4.178540 CTCGTGTTATTCATACCAACCGT 58.821 43.478 0.00 0.00 0.00 4.83
709 710 4.389382 CGTGTTATTCATACCAACCGTGAA 59.611 41.667 0.00 0.00 36.42 3.18
711 712 5.179742 GTGTTATTCATACCAACCGTGAACA 59.820 40.000 0.00 0.00 34.98 3.18
712 713 5.179742 TGTTATTCATACCAACCGTGAACAC 59.820 40.000 0.00 0.00 34.98 3.32
716 717 4.895961 TCATACCAACCGTGAACACAATA 58.104 39.130 5.80 0.00 0.00 1.90
727 728 7.380536 ACCGTGAACACAATATAGTTAGTGAA 58.619 34.615 5.80 0.00 35.97 3.18
748 750 9.952188 AGTGAATTTTTAGCTAAGTTTGAACTC 57.048 29.630 6.24 0.00 38.57 3.01
759 765 7.014808 AGCTAAGTTTGAACTCAGAGTAGAACT 59.985 37.037 15.38 15.38 38.57 3.01
763 769 6.758886 AGTTTGAACTCAGAGTAGAACTGTTG 59.241 38.462 18.37 0.00 32.86 3.33
768 774 5.133941 ACTCAGAGTAGAACTGTTGTCTGA 58.866 41.667 0.00 15.24 38.43 3.27
778 784 2.093973 ACTGTTGTCTGATTAGGCTCGG 60.094 50.000 0.00 0.00 0.00 4.63
795 801 1.356398 TCGGGCCTCCCAAAAGTTATT 59.644 47.619 0.84 0.00 45.83 1.40
796 802 2.577105 TCGGGCCTCCCAAAAGTTATTA 59.423 45.455 0.84 0.00 45.83 0.98
797 803 3.203487 TCGGGCCTCCCAAAAGTTATTAT 59.797 43.478 0.84 0.00 45.83 1.28
798 804 3.958147 CGGGCCTCCCAAAAGTTATTATT 59.042 43.478 0.84 0.00 45.83 1.40
799 805 4.202111 CGGGCCTCCCAAAAGTTATTATTG 60.202 45.833 0.84 0.00 45.83 1.90
800 806 4.959839 GGGCCTCCCAAAAGTTATTATTGA 59.040 41.667 0.84 0.00 44.65 2.57
801 807 5.423931 GGGCCTCCCAAAAGTTATTATTGAA 59.576 40.000 0.84 0.00 44.65 2.69
802 808 6.099701 GGGCCTCCCAAAAGTTATTATTGAAT 59.900 38.462 0.84 0.00 44.65 2.57
803 809 7.210174 GGCCTCCCAAAAGTTATTATTGAATC 58.790 38.462 0.00 0.00 0.00 2.52
860 870 2.742774 ACTCGGTTTGAAATTGCTTGC 58.257 42.857 0.00 0.00 0.00 4.01
876 886 5.356882 TGCTTGCCGCAGAAATATATAAC 57.643 39.130 0.00 0.00 45.47 1.89
878 888 5.298026 TGCTTGCCGCAGAAATATATAACAA 59.702 36.000 0.00 0.00 45.47 2.83
880 890 6.306356 GCTTGCCGCAGAAATATATAACAATG 59.694 38.462 0.00 0.00 38.92 2.82
881 891 7.503521 TTGCCGCAGAAATATATAACAATGA 57.496 32.000 0.00 0.00 0.00 2.57
927 937 6.202954 CGTCTAGATACATCCATTTTCCCAAC 59.797 42.308 0.00 0.00 0.00 3.77
936 946 7.744733 ACATCCATTTTCCCAACAAGTATTTT 58.255 30.769 0.00 0.00 0.00 1.82
938 948 6.451393 TCCATTTTCCCAACAAGTATTTTCG 58.549 36.000 0.00 0.00 0.00 3.46
941 951 7.439655 CCATTTTCCCAACAAGTATTTTCGAAA 59.560 33.333 6.47 6.47 0.00 3.46
1174 1199 4.148825 CTCCTCCCGCCGTTCCTG 62.149 72.222 0.00 0.00 0.00 3.86
1484 1515 1.068127 CAACCCTAGATTACCCGACCG 59.932 57.143 0.00 0.00 0.00 4.79
1521 1561 2.047844 CACAGTCCCGTGCCTCAG 60.048 66.667 0.00 0.00 0.00 3.35
1570 1610 2.266689 CTAAACCCGACCCGGTGG 59.733 66.667 0.00 0.00 46.80 4.61
2316 2371 3.564511 CATTACCACACCTTTTGCTTCG 58.435 45.455 0.00 0.00 0.00 3.79
2417 2785 2.354805 GCTGAACAGGGGAAGTTATCGT 60.355 50.000 3.99 0.00 0.00 3.73
2675 3370 6.910536 AATTCTTTCCACTATTGCGTAGAG 57.089 37.500 3.25 0.00 34.38 2.43
2716 3411 9.553064 AGATGTCAGATATAATCTTTCAACACC 57.447 33.333 0.00 0.00 37.58 4.16
2717 3412 9.553064 GATGTCAGATATAATCTTTCAACACCT 57.447 33.333 0.00 0.00 37.58 4.00
2718 3413 9.911788 ATGTCAGATATAATCTTTCAACACCTT 57.088 29.630 0.00 0.00 37.58 3.50
2719 3414 9.383519 TGTCAGATATAATCTTTCAACACCTTC 57.616 33.333 0.00 0.00 37.58 3.46
2720 3415 8.543774 GTCAGATATAATCTTTCAACACCTTCG 58.456 37.037 0.00 0.00 37.58 3.79
2721 3416 8.258007 TCAGATATAATCTTTCAACACCTTCGT 58.742 33.333 0.00 0.00 37.58 3.85
2722 3417 9.529325 CAGATATAATCTTTCAACACCTTCGTA 57.471 33.333 0.00 0.00 37.58 3.43
2725 3420 9.832445 ATATAATCTTTCAACACCTTCGTATGT 57.168 29.630 0.00 0.00 0.00 2.29
2853 3563 4.645136 TCTTCAGCACCTTCTGTATATCGT 59.355 41.667 0.00 0.00 35.63 3.73
2857 3567 5.768164 TCAGCACCTTCTGTATATCGTGATA 59.232 40.000 0.00 0.00 35.63 2.15
2907 3617 9.944376 ATGTATCCTGTGCTATATTTAATCGTT 57.056 29.630 0.00 0.00 0.00 3.85
2997 3710 5.296780 CCACTATTGCGTTGATTGGATAACT 59.703 40.000 0.00 0.00 0.00 2.24
3040 3753 6.992063 ATCTTCAACACCTTCATATGTCAC 57.008 37.500 1.90 0.00 0.00 3.67
3166 3880 7.834881 TTCTTCACCACCTTCTATATATCGT 57.165 36.000 0.00 0.00 0.00 3.73
3505 4238 0.385598 GTCGCGAACCAAGCTTTTCC 60.386 55.000 12.06 0.00 0.00 3.13
3571 4304 8.817959 CATAAATCATGAACTGCAGAAGCAACG 61.818 40.741 23.35 10.39 43.28 4.10
3598 4331 1.066303 CGAGCGAGGAGAGCTTAACAT 59.934 52.381 0.00 0.00 46.13 2.71
3663 4396 0.388294 GGATCCAGCCGTACTGTACC 59.612 60.000 6.95 0.00 45.68 3.34
3673 4406 3.466836 CCGTACTGTACCGTATGGACTA 58.533 50.000 24.15 0.00 45.36 2.59
4009 4776 7.278646 TGAAATCTCTAGTCAATTCATTCCGTG 59.721 37.037 0.00 0.00 0.00 4.94
4035 4803 9.953697 GATGTCGAGTTATAGTTTCTGTAATCT 57.046 33.333 0.00 0.00 0.00 2.40
4109 4880 3.966665 AGATGGGTTTTGTTGAACATGGT 59.033 39.130 0.00 0.00 0.00 3.55
4129 4900 4.704540 TGGTATATCTTGGTTTGCCTGTTG 59.295 41.667 0.00 0.00 35.27 3.33
4157 4928 5.771469 CAGCATCACAAAATTTGGTCACTA 58.229 37.500 10.71 0.00 34.12 2.74
4263 5070 4.203226 TGTGATTCTTTGCACTTGGTACA 58.797 39.130 0.00 0.00 36.05 2.90
4271 5078 0.951558 GCACTTGGTACAGTGTTGGG 59.048 55.000 13.23 0.00 42.39 4.12
4279 5086 1.862827 GTACAGTGTTGGGTGAACGTC 59.137 52.381 0.00 0.00 37.38 4.34
4289 5100 0.458716 GGTGAACGTCTAGGCAGAGC 60.459 60.000 0.00 0.00 0.00 4.09
4292 5103 1.202582 TGAACGTCTAGGCAGAGCTTC 59.797 52.381 0.00 0.00 0.00 3.86
4298 5109 2.234908 GTCTAGGCAGAGCTTCAGGAAA 59.765 50.000 0.00 0.00 0.00 3.13
4311 5122 4.261741 GCTTCAGGAAATGAACTTGCTTGA 60.262 41.667 0.00 0.00 43.09 3.02
4360 5171 8.716674 TCTTACAGTTCTTTTCTCCCTACTAA 57.283 34.615 0.00 0.00 0.00 2.24
4362 5173 9.589111 CTTACAGTTCTTTTCTCCCTACTAATC 57.411 37.037 0.00 0.00 0.00 1.75
4363 5174 7.800300 ACAGTTCTTTTCTCCCTACTAATCT 57.200 36.000 0.00 0.00 0.00 2.40
4365 5176 7.093245 ACAGTTCTTTTCTCCCTACTAATCTCC 60.093 40.741 0.00 0.00 0.00 3.71
4366 5177 7.125053 CAGTTCTTTTCTCCCTACTAATCTCCT 59.875 40.741 0.00 0.00 0.00 3.69
4367 5178 7.680739 AGTTCTTTTCTCCCTACTAATCTCCTT 59.319 37.037 0.00 0.00 0.00 3.36
4368 5179 8.322828 GTTCTTTTCTCCCTACTAATCTCCTTT 58.677 37.037 0.00 0.00 0.00 3.11
4369 5180 8.450780 TCTTTTCTCCCTACTAATCTCCTTTT 57.549 34.615 0.00 0.00 0.00 2.27
4370 5181 8.322091 TCTTTTCTCCCTACTAATCTCCTTTTG 58.678 37.037 0.00 0.00 0.00 2.44
4371 5182 7.569599 TTTCTCCCTACTAATCTCCTTTTGT 57.430 36.000 0.00 0.00 0.00 2.83
4372 5183 7.569599 TTCTCCCTACTAATCTCCTTTTGTT 57.430 36.000 0.00 0.00 0.00 2.83
4373 5184 7.569599 TCTCCCTACTAATCTCCTTTTGTTT 57.430 36.000 0.00 0.00 0.00 2.83
4374 5185 7.985589 TCTCCCTACTAATCTCCTTTTGTTTT 58.014 34.615 0.00 0.00 0.00 2.43
4375 5186 8.445588 TCTCCCTACTAATCTCCTTTTGTTTTT 58.554 33.333 0.00 0.00 0.00 1.94
4376 5187 9.734984 CTCCCTACTAATCTCCTTTTGTTTTTA 57.265 33.333 0.00 0.00 0.00 1.52
4402 5213 7.989947 TTCTTGGTATTATCTACTCCCTTGT 57.010 36.000 0.00 0.00 0.00 3.16
4403 5214 7.598759 TCTTGGTATTATCTACTCCCTTGTC 57.401 40.000 0.00 0.00 0.00 3.18
4404 5215 6.553852 TCTTGGTATTATCTACTCCCTTGTCC 59.446 42.308 0.00 0.00 0.00 4.02
4405 5216 5.784023 TGGTATTATCTACTCCCTTGTCCA 58.216 41.667 0.00 0.00 0.00 4.02
4406 5217 5.839063 TGGTATTATCTACTCCCTTGTCCAG 59.161 44.000 0.00 0.00 0.00 3.86
4407 5218 6.075984 GGTATTATCTACTCCCTTGTCCAGA 58.924 44.000 0.00 0.00 0.00 3.86
4408 5219 6.553852 GGTATTATCTACTCCCTTGTCCAGAA 59.446 42.308 0.00 0.00 0.00 3.02
4409 5220 7.235812 GGTATTATCTACTCCCTTGTCCAGAAT 59.764 40.741 0.00 0.00 0.00 2.40
4410 5221 7.698163 ATTATCTACTCCCTTGTCCAGAATT 57.302 36.000 0.00 0.00 0.00 2.17
4411 5222 8.798975 ATTATCTACTCCCTTGTCCAGAATTA 57.201 34.615 0.00 0.00 0.00 1.40
4412 5223 5.934402 TCTACTCCCTTGTCCAGAATTAC 57.066 43.478 0.00 0.00 0.00 1.89
4413 5224 5.590818 TCTACTCCCTTGTCCAGAATTACT 58.409 41.667 0.00 0.00 0.00 2.24
4414 5225 6.023603 TCTACTCCCTTGTCCAGAATTACTT 58.976 40.000 0.00 0.00 0.00 2.24
4415 5226 4.911390 ACTCCCTTGTCCAGAATTACTTG 58.089 43.478 0.00 0.00 0.00 3.16
4416 5227 4.351111 ACTCCCTTGTCCAGAATTACTTGT 59.649 41.667 0.00 0.00 0.00 3.16
4417 5228 5.163088 ACTCCCTTGTCCAGAATTACTTGTT 60.163 40.000 0.00 0.00 0.00 2.83
4418 5229 5.070001 TCCCTTGTCCAGAATTACTTGTTG 58.930 41.667 0.00 0.00 0.00 3.33
4419 5230 4.827284 CCCTTGTCCAGAATTACTTGTTGT 59.173 41.667 0.00 0.00 0.00 3.32
4420 5231 6.001460 CCCTTGTCCAGAATTACTTGTTGTA 58.999 40.000 0.00 0.00 0.00 2.41
4421 5232 6.149474 CCCTTGTCCAGAATTACTTGTTGTAG 59.851 42.308 0.00 0.00 32.08 2.74
4422 5233 6.934645 CCTTGTCCAGAATTACTTGTTGTAGA 59.065 38.462 0.00 0.00 32.08 2.59
4423 5234 7.444183 CCTTGTCCAGAATTACTTGTTGTAGAA 59.556 37.037 0.00 0.00 32.08 2.10
4424 5235 8.740123 TTGTCCAGAATTACTTGTTGTAGAAA 57.260 30.769 0.00 0.00 32.08 2.52
4425 5236 8.918202 TGTCCAGAATTACTTGTTGTAGAAAT 57.082 30.769 0.00 0.00 32.08 2.17
4426 5237 8.783093 TGTCCAGAATTACTTGTTGTAGAAATG 58.217 33.333 0.00 0.00 32.08 2.32
4427 5238 8.237267 GTCCAGAATTACTTGTTGTAGAAATGG 58.763 37.037 0.00 0.00 32.08 3.16
4428 5239 8.160765 TCCAGAATTACTTGTTGTAGAAATGGA 58.839 33.333 0.00 0.00 33.85 3.41
4429 5240 8.960591 CCAGAATTACTTGTTGTAGAAATGGAT 58.039 33.333 0.00 0.00 31.21 3.41
4430 5241 9.778993 CAGAATTACTTGTTGTAGAAATGGATG 57.221 33.333 0.00 0.00 32.08 3.51
4431 5242 9.520515 AGAATTACTTGTTGTAGAAATGGATGT 57.479 29.630 0.00 0.00 32.08 3.06
4437 5248 9.823647 ACTTGTTGTAGAAATGGATGTATCTAG 57.176 33.333 0.00 0.00 0.00 2.43
4439 5250 9.817809 TTGTTGTAGAAATGGATGTATCTAGAC 57.182 33.333 0.00 0.00 0.00 2.59
4440 5251 8.135529 TGTTGTAGAAATGGATGTATCTAGACG 58.864 37.037 0.00 0.00 0.00 4.18
4441 5252 7.818997 TGTAGAAATGGATGTATCTAGACGT 57.181 36.000 0.00 0.00 0.00 4.34
4442 5253 8.913487 TGTAGAAATGGATGTATCTAGACGTA 57.087 34.615 0.00 0.00 0.00 3.57
4443 5254 9.516546 TGTAGAAATGGATGTATCTAGACGTAT 57.483 33.333 0.00 0.00 0.00 3.06
4474 5285 9.209048 AGTTCTAGGTACATACATTTGTATCCA 57.791 33.333 0.21 0.00 39.06 3.41
4475 5286 9.998106 GTTCTAGGTACATACATTTGTATCCAT 57.002 33.333 0.21 0.00 39.06 3.41
4480 5291 9.342308 AGGTACATACATTTGTATCCATTTCTG 57.658 33.333 0.21 0.00 39.06 3.02
4481 5292 8.076178 GGTACATACATTTGTATCCATTTCTGC 58.924 37.037 0.21 0.00 39.06 4.26
4482 5293 6.728200 ACATACATTTGTATCCATTTCTGCG 58.272 36.000 0.21 0.00 39.06 5.18
4483 5294 6.542005 ACATACATTTGTATCCATTTCTGCGA 59.458 34.615 0.21 0.00 39.06 5.10
4484 5295 5.235305 ACATTTGTATCCATTTCTGCGAC 57.765 39.130 0.00 0.00 0.00 5.19
4485 5296 4.699735 ACATTTGTATCCATTTCTGCGACA 59.300 37.500 0.00 0.00 0.00 4.35
4486 5297 5.182950 ACATTTGTATCCATTTCTGCGACAA 59.817 36.000 0.00 0.00 0.00 3.18
4487 5298 4.944962 TTGTATCCATTTCTGCGACAAG 57.055 40.909 0.00 0.00 0.00 3.16
4488 5299 3.937814 TGTATCCATTTCTGCGACAAGT 58.062 40.909 0.00 0.00 0.00 3.16
4489 5300 5.079689 TGTATCCATTTCTGCGACAAGTA 57.920 39.130 0.00 0.00 0.00 2.24
4490 5301 5.483811 TGTATCCATTTCTGCGACAAGTAA 58.516 37.500 0.00 0.00 0.00 2.24
4491 5302 6.112734 TGTATCCATTTCTGCGACAAGTAAT 58.887 36.000 0.00 0.00 0.00 1.89
4492 5303 5.741388 ATCCATTTCTGCGACAAGTAATC 57.259 39.130 0.00 0.00 0.00 1.75
4493 5304 3.938963 TCCATTTCTGCGACAAGTAATCC 59.061 43.478 0.00 0.00 0.00 3.01
4494 5305 3.242413 CCATTTCTGCGACAAGTAATCCG 60.242 47.826 0.00 0.00 0.00 4.18
4495 5306 2.004583 TTCTGCGACAAGTAATCCGG 57.995 50.000 0.00 0.00 0.00 5.14
4496 5307 0.174845 TCTGCGACAAGTAATCCGGG 59.825 55.000 0.00 0.00 0.00 5.73
4497 5308 0.174845 CTGCGACAAGTAATCCGGGA 59.825 55.000 0.00 0.00 0.00 5.14
4498 5309 0.108520 TGCGACAAGTAATCCGGGAC 60.109 55.000 0.00 0.00 0.00 4.46
4511 5322 2.045143 GGGACGGACGGAGAGAGT 60.045 66.667 0.00 0.00 0.00 3.24
4512 5323 1.222936 GGGACGGACGGAGAGAGTA 59.777 63.158 0.00 0.00 0.00 2.59
4513 5324 0.179023 GGGACGGACGGAGAGAGTAT 60.179 60.000 0.00 0.00 0.00 2.12
4514 5325 1.677942 GGACGGACGGAGAGAGTATT 58.322 55.000 0.00 0.00 0.00 1.89
4515 5326 2.486191 GGGACGGACGGAGAGAGTATTA 60.486 54.545 0.00 0.00 0.00 0.98
4516 5327 3.410508 GGACGGACGGAGAGAGTATTAT 58.589 50.000 0.00 0.00 0.00 1.28
4517 5328 4.564406 GGGACGGACGGAGAGAGTATTATA 60.564 50.000 0.00 0.00 0.00 0.98
4518 5329 5.184711 GGACGGACGGAGAGAGTATTATAT 58.815 45.833 0.00 0.00 0.00 0.86
4519 5330 6.344500 GGACGGACGGAGAGAGTATTATATA 58.656 44.000 0.00 0.00 0.00 0.86
4520 5331 6.991531 GGACGGACGGAGAGAGTATTATATAT 59.008 42.308 0.00 0.00 0.00 0.86
4521 5332 7.041916 GGACGGACGGAGAGAGTATTATATATG 60.042 44.444 0.00 0.00 0.00 1.78
4522 5333 6.766944 ACGGACGGAGAGAGTATTATATATGG 59.233 42.308 0.00 0.00 0.00 2.74
4523 5334 6.205076 CGGACGGAGAGAGTATTATATATGGG 59.795 46.154 0.00 0.00 0.00 4.00
4524 5335 6.490721 GGACGGAGAGAGTATTATATATGGGG 59.509 46.154 0.00 0.00 0.00 4.96
4525 5336 7.222180 ACGGAGAGAGTATTATATATGGGGA 57.778 40.000 0.00 0.00 0.00 4.81
4526 5337 7.649715 ACGGAGAGAGTATTATATATGGGGAA 58.350 38.462 0.00 0.00 0.00 3.97
4527 5338 7.560626 ACGGAGAGAGTATTATATATGGGGAAC 59.439 40.741 0.00 0.00 0.00 3.62
4528 5339 7.255173 CGGAGAGAGTATTATATATGGGGAACG 60.255 44.444 0.00 0.00 0.00 3.95
4529 5340 7.560626 GGAGAGAGTATTATATATGGGGAACGT 59.439 40.741 0.00 0.00 0.00 3.99
4530 5341 8.522542 AGAGAGTATTATATATGGGGAACGTC 57.477 38.462 0.00 0.00 0.00 4.34
4531 5342 7.282675 AGAGAGTATTATATATGGGGAACGTCG 59.717 40.741 0.00 0.00 0.00 5.12
4532 5343 7.114754 AGAGTATTATATATGGGGAACGTCGA 58.885 38.462 0.00 0.00 0.00 4.20
4533 5344 7.282675 AGAGTATTATATATGGGGAACGTCGAG 59.717 40.741 0.00 0.00 0.00 4.04
4534 5345 6.888632 AGTATTATATATGGGGAACGTCGAGT 59.111 38.462 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.246635 CCTTCTCTCTTTTCCGGCGA 59.753 55.000 9.30 0.00 0.00 5.54
26 27 2.484651 GGCGAAACCTTCTCTCTTTTCC 59.515 50.000 0.00 0.00 34.51 3.13
172 173 0.167470 CGCTTCTCGTCGTCCAAGTA 59.833 55.000 0.00 0.00 0.00 2.24
176 177 3.324099 GAGCGCTTCTCGTCGTCCA 62.324 63.158 13.26 0.00 41.07 4.02
196 197 4.880537 CCTCCTACAGCAGCGCCG 62.881 72.222 2.29 0.00 0.00 6.46
197 198 2.914777 CTTCCTCCTACAGCAGCGCC 62.915 65.000 2.29 0.00 0.00 6.53
198 199 1.520342 CTTCCTCCTACAGCAGCGC 60.520 63.158 0.00 0.00 0.00 5.92
199 200 1.520342 GCTTCCTCCTACAGCAGCG 60.520 63.158 0.00 0.00 33.45 5.18
200 201 1.153269 GGCTTCCTCCTACAGCAGC 60.153 63.158 0.00 0.00 35.05 5.25
201 202 1.142748 CGGCTTCCTCCTACAGCAG 59.857 63.158 0.00 0.00 35.05 4.24
202 203 0.687757 ATCGGCTTCCTCCTACAGCA 60.688 55.000 0.00 0.00 35.05 4.41
203 204 0.249657 CATCGGCTTCCTCCTACAGC 60.250 60.000 0.00 0.00 0.00 4.40
204 205 0.249657 GCATCGGCTTCCTCCTACAG 60.250 60.000 0.00 0.00 36.96 2.74
205 206 1.686325 GGCATCGGCTTCCTCCTACA 61.686 60.000 0.00 0.00 40.87 2.74
206 207 1.069935 GGCATCGGCTTCCTCCTAC 59.930 63.158 0.00 0.00 40.87 3.18
207 208 2.498941 CGGCATCGGCTTCCTCCTA 61.499 63.158 0.00 0.00 40.87 2.94
208 209 3.854669 CGGCATCGGCTTCCTCCT 61.855 66.667 0.00 0.00 40.87 3.69
209 210 3.849951 TCGGCATCGGCTTCCTCC 61.850 66.667 0.00 0.00 40.87 4.30
210 211 2.586357 GTCGGCATCGGCTTCCTC 60.586 66.667 0.00 0.00 40.87 3.71
211 212 4.514577 CGTCGGCATCGGCTTCCT 62.515 66.667 0.00 0.00 39.11 3.36
212 213 4.814294 ACGTCGGCATCGGCTTCC 62.814 66.667 0.00 0.00 39.11 3.46
213 214 3.255379 GACGTCGGCATCGGCTTC 61.255 66.667 0.00 0.00 39.11 3.86
214 215 4.814294 GGACGTCGGCATCGGCTT 62.814 66.667 9.92 0.00 39.11 4.35
217 218 4.873129 CCTGGACGTCGGCATCGG 62.873 72.222 9.92 0.00 36.95 4.18
218 219 3.822192 TCCTGGACGTCGGCATCG 61.822 66.667 9.92 0.00 37.82 3.84
219 220 2.202756 GTCCTGGACGTCGGCATC 60.203 66.667 11.71 0.00 0.00 3.91
228 229 1.186267 AGGTGTTCCTCGTCCTGGAC 61.186 60.000 16.99 16.99 40.58 4.02
229 230 1.155390 AGGTGTTCCTCGTCCTGGA 59.845 57.895 0.00 0.00 40.58 3.86
230 231 3.793060 AGGTGTTCCTCGTCCTGG 58.207 61.111 0.00 0.00 40.58 4.45
245 246 4.899239 GCGGCGAGGACCATGAGG 62.899 72.222 12.98 0.00 42.21 3.86
246 247 4.899239 GGCGGCGAGGACCATGAG 62.899 72.222 12.98 0.00 0.00 2.90
276 277 0.522076 GGCTTTTCATTGCTCGCGAG 60.522 55.000 31.37 31.37 0.00 5.03
277 278 1.501741 GGCTTTTCATTGCTCGCGA 59.498 52.632 9.26 9.26 0.00 5.87
278 279 1.864750 CGGCTTTTCATTGCTCGCG 60.865 57.895 0.00 0.00 0.00 5.87
279 280 2.154569 GCGGCTTTTCATTGCTCGC 61.155 57.895 0.00 0.00 39.82 5.03
280 281 1.864750 CGCGGCTTTTCATTGCTCG 60.865 57.895 0.00 0.00 0.00 5.03
281 282 1.514873 CCGCGGCTTTTCATTGCTC 60.515 57.895 14.67 0.00 0.00 4.26
282 283 2.568090 CCGCGGCTTTTCATTGCT 59.432 55.556 14.67 0.00 0.00 3.91
283 284 3.181290 GCCGCGGCTTTTCATTGC 61.181 61.111 41.71 12.20 38.26 3.56
284 285 2.875711 CGCCGCGGCTTTTCATTG 60.876 61.111 43.60 24.42 39.32 2.82
285 286 3.039202 CTCGCCGCGGCTTTTCATT 62.039 57.895 43.60 0.00 39.32 2.57
286 287 3.499737 CTCGCCGCGGCTTTTCAT 61.500 61.111 43.60 0.00 39.32 2.57
313 314 3.437795 CTTTCAGCTGCCCAGGCG 61.438 66.667 9.47 0.18 45.51 5.52
314 315 3.756727 GCTTTCAGCTGCCCAGGC 61.757 66.667 9.47 0.38 38.45 4.85
315 316 1.466025 TTTGCTTTCAGCTGCCCAGG 61.466 55.000 9.47 0.00 42.97 4.45
316 317 0.038526 CTTTGCTTTCAGCTGCCCAG 60.039 55.000 9.47 5.55 42.97 4.45
317 318 0.467844 TCTTTGCTTTCAGCTGCCCA 60.468 50.000 9.47 0.00 42.97 5.36
318 319 0.675633 TTCTTTGCTTTCAGCTGCCC 59.324 50.000 9.47 0.00 42.97 5.36
319 320 1.603931 GGTTCTTTGCTTTCAGCTGCC 60.604 52.381 9.47 0.00 42.97 4.85
320 321 1.775869 GGTTCTTTGCTTTCAGCTGC 58.224 50.000 9.47 0.00 42.97 5.25
321 322 1.603802 TCGGTTCTTTGCTTTCAGCTG 59.396 47.619 7.63 7.63 42.97 4.24
322 323 1.604278 GTCGGTTCTTTGCTTTCAGCT 59.396 47.619 0.00 0.00 42.97 4.24
323 324 1.333619 TGTCGGTTCTTTGCTTTCAGC 59.666 47.619 0.00 0.00 42.82 4.26
324 325 3.250762 TGATGTCGGTTCTTTGCTTTCAG 59.749 43.478 0.00 0.00 0.00 3.02
325 326 3.210227 TGATGTCGGTTCTTTGCTTTCA 58.790 40.909 0.00 0.00 0.00 2.69
326 327 3.896648 TGATGTCGGTTCTTTGCTTTC 57.103 42.857 0.00 0.00 0.00 2.62
327 328 4.074970 AGATGATGTCGGTTCTTTGCTTT 58.925 39.130 0.00 0.00 0.00 3.51
328 329 3.438087 CAGATGATGTCGGTTCTTTGCTT 59.562 43.478 0.00 0.00 0.00 3.91
329 330 3.005554 CAGATGATGTCGGTTCTTTGCT 58.994 45.455 0.00 0.00 0.00 3.91
330 331 2.096496 CCAGATGATGTCGGTTCTTTGC 59.904 50.000 0.00 0.00 0.00 3.68
331 332 3.599343 TCCAGATGATGTCGGTTCTTTG 58.401 45.455 0.00 0.00 0.00 2.77
332 333 3.981071 TCCAGATGATGTCGGTTCTTT 57.019 42.857 0.00 0.00 0.00 2.52
333 334 3.369892 CCTTCCAGATGATGTCGGTTCTT 60.370 47.826 0.00 0.00 0.00 2.52
334 335 2.169352 CCTTCCAGATGATGTCGGTTCT 59.831 50.000 0.00 0.00 0.00 3.01
335 336 2.555199 CCTTCCAGATGATGTCGGTTC 58.445 52.381 0.00 0.00 0.00 3.62
336 337 1.407437 GCCTTCCAGATGATGTCGGTT 60.407 52.381 0.00 0.00 0.00 4.44
337 338 0.179000 GCCTTCCAGATGATGTCGGT 59.821 55.000 0.00 0.00 0.00 4.69
338 339 0.467384 AGCCTTCCAGATGATGTCGG 59.533 55.000 0.00 0.00 0.00 4.79
339 340 3.674528 ATAGCCTTCCAGATGATGTCG 57.325 47.619 0.00 0.00 0.00 4.35
340 341 3.501445 GCAATAGCCTTCCAGATGATGTC 59.499 47.826 0.00 0.00 33.58 3.06
341 342 3.117776 TGCAATAGCCTTCCAGATGATGT 60.118 43.478 0.00 0.00 41.13 3.06
342 343 3.483421 TGCAATAGCCTTCCAGATGATG 58.517 45.455 0.00 0.00 41.13 3.07
343 344 3.870538 TGCAATAGCCTTCCAGATGAT 57.129 42.857 0.00 0.00 41.13 2.45
344 345 3.483421 CATGCAATAGCCTTCCAGATGA 58.517 45.455 0.00 0.00 41.13 2.92
345 346 2.030185 GCATGCAATAGCCTTCCAGATG 60.030 50.000 14.21 0.00 41.13 2.90
346 347 2.158505 AGCATGCAATAGCCTTCCAGAT 60.159 45.455 21.98 0.00 41.13 2.90
347 348 1.213678 AGCATGCAATAGCCTTCCAGA 59.786 47.619 21.98 0.00 41.13 3.86
348 349 1.607628 GAGCATGCAATAGCCTTCCAG 59.392 52.381 21.98 0.00 41.13 3.86
349 350 1.213678 AGAGCATGCAATAGCCTTCCA 59.786 47.619 21.98 0.00 41.13 3.53
350 351 1.978454 AGAGCATGCAATAGCCTTCC 58.022 50.000 21.98 0.00 41.13 3.46
351 352 3.737850 AGTAGAGCATGCAATAGCCTTC 58.262 45.455 21.98 5.80 41.13 3.46
352 353 3.495806 GGAGTAGAGCATGCAATAGCCTT 60.496 47.826 21.98 0.00 41.13 4.35
353 354 2.038295 GGAGTAGAGCATGCAATAGCCT 59.962 50.000 21.98 7.38 41.13 4.58
354 355 2.421619 GGAGTAGAGCATGCAATAGCC 58.578 52.381 21.98 9.96 41.13 3.93
355 356 2.064762 CGGAGTAGAGCATGCAATAGC 58.935 52.381 21.98 5.84 42.57 2.97
356 357 3.005261 AGTCGGAGTAGAGCATGCAATAG 59.995 47.826 21.98 2.71 0.00 1.73
357 358 2.959030 AGTCGGAGTAGAGCATGCAATA 59.041 45.455 21.98 9.19 0.00 1.90
358 359 1.759445 AGTCGGAGTAGAGCATGCAAT 59.241 47.619 21.98 10.30 0.00 3.56
359 360 1.186200 AGTCGGAGTAGAGCATGCAA 58.814 50.000 21.98 1.32 0.00 4.08
360 361 1.676529 GTAGTCGGAGTAGAGCATGCA 59.323 52.381 21.98 0.00 0.00 3.96
361 362 1.950909 AGTAGTCGGAGTAGAGCATGC 59.049 52.381 10.51 10.51 0.00 4.06
362 363 3.303461 CGAAGTAGTCGGAGTAGAGCATG 60.303 52.174 0.00 0.00 46.45 4.06
363 364 2.873472 CGAAGTAGTCGGAGTAGAGCAT 59.127 50.000 0.00 0.00 46.45 3.79
364 365 2.277969 CGAAGTAGTCGGAGTAGAGCA 58.722 52.381 0.00 0.00 46.45 4.26
375 376 2.104530 GAGGGCGGCGAAGTAGTC 59.895 66.667 12.98 0.00 0.00 2.59
376 377 3.459063 GGAGGGCGGCGAAGTAGT 61.459 66.667 12.98 0.00 0.00 2.73
377 378 3.458163 TGGAGGGCGGCGAAGTAG 61.458 66.667 12.98 0.00 0.00 2.57
378 379 3.766691 GTGGAGGGCGGCGAAGTA 61.767 66.667 12.98 0.00 0.00 2.24
390 391 4.662961 TGTCGCCGTGCAGTGGAG 62.663 66.667 9.09 5.74 0.00 3.86
391 392 3.741830 TTTGTCGCCGTGCAGTGGA 62.742 57.895 9.09 0.00 0.00 4.02
392 393 3.240606 CTTTGTCGCCGTGCAGTGG 62.241 63.158 0.36 0.36 0.00 4.00
393 394 2.249309 CTTTGTCGCCGTGCAGTG 59.751 61.111 0.00 0.00 0.00 3.66
394 395 2.203015 ACTTTGTCGCCGTGCAGT 60.203 55.556 0.00 0.00 0.00 4.40
395 396 2.047151 AACACTTTGTCGCCGTGCAG 62.047 55.000 0.00 0.00 32.07 4.41
396 397 1.649390 AAACACTTTGTCGCCGTGCA 61.649 50.000 0.00 0.00 32.07 4.57
397 398 0.928451 GAAACACTTTGTCGCCGTGC 60.928 55.000 0.00 0.00 32.07 5.34
398 399 0.653323 CGAAACACTTTGTCGCCGTG 60.653 55.000 0.00 0.00 34.92 4.94
399 400 1.639534 CGAAACACTTTGTCGCCGT 59.360 52.632 0.00 0.00 0.00 5.68
400 401 1.083015 CCGAAACACTTTGTCGCCG 60.083 57.895 0.00 0.00 33.46 6.46
401 402 1.370051 GCCGAAACACTTTGTCGCC 60.370 57.895 0.00 0.00 33.46 5.54
402 403 1.721133 CGCCGAAACACTTTGTCGC 60.721 57.895 0.00 0.00 33.46 5.19
403 404 1.721133 GCGCCGAAACACTTTGTCG 60.721 57.895 0.00 0.00 34.58 4.35
404 405 1.370051 GGCGCCGAAACACTTTGTC 60.370 57.895 12.58 0.00 0.00 3.18
405 406 2.719354 GGCGCCGAAACACTTTGT 59.281 55.556 12.58 0.00 0.00 2.83
406 407 2.426752 CGGCGCCGAAACACTTTG 60.427 61.111 44.86 10.04 42.83 2.77
429 430 0.461339 TAACGGCTTTCGGCTCATCC 60.461 55.000 0.00 0.00 44.45 3.51
430 431 1.261619 CATAACGGCTTTCGGCTCATC 59.738 52.381 0.00 0.00 44.45 2.92
431 432 1.299541 CATAACGGCTTTCGGCTCAT 58.700 50.000 0.00 0.00 44.45 2.90
432 433 0.036765 ACATAACGGCTTTCGGCTCA 60.037 50.000 0.00 0.00 44.45 4.26
433 434 0.373716 CACATAACGGCTTTCGGCTC 59.626 55.000 0.00 0.00 44.45 4.70
434 435 0.036765 TCACATAACGGCTTTCGGCT 60.037 50.000 0.00 0.00 44.45 5.52
435 436 1.014352 ATCACATAACGGCTTTCGGC 58.986 50.000 0.00 0.00 44.45 5.54
436 437 4.868450 TTTATCACATAACGGCTTTCGG 57.132 40.909 0.00 0.00 44.45 4.30
457 458 8.921670 GGCGTGAATTCAACATAAGTAATTTTT 58.078 29.630 10.35 0.00 0.00 1.94
458 459 7.272515 CGGCGTGAATTCAACATAAGTAATTTT 59.727 33.333 10.35 0.00 0.00 1.82
459 460 6.745450 CGGCGTGAATTCAACATAAGTAATTT 59.255 34.615 10.35 0.00 0.00 1.82
460 461 6.092944 TCGGCGTGAATTCAACATAAGTAATT 59.907 34.615 10.35 0.00 0.00 1.40
461 462 5.583061 TCGGCGTGAATTCAACATAAGTAAT 59.417 36.000 10.35 0.00 0.00 1.89
462 463 4.930405 TCGGCGTGAATTCAACATAAGTAA 59.070 37.500 10.35 0.00 0.00 2.24
463 464 4.496360 TCGGCGTGAATTCAACATAAGTA 58.504 39.130 10.35 0.00 0.00 2.24
464 465 3.331150 TCGGCGTGAATTCAACATAAGT 58.669 40.909 10.35 0.00 0.00 2.24
465 466 4.088648 GTTCGGCGTGAATTCAACATAAG 58.911 43.478 10.35 0.44 39.21 1.73
466 467 3.120130 GGTTCGGCGTGAATTCAACATAA 60.120 43.478 10.35 1.46 39.21 1.90
467 468 2.417239 GGTTCGGCGTGAATTCAACATA 59.583 45.455 10.35 0.00 39.21 2.29
468 469 1.199097 GGTTCGGCGTGAATTCAACAT 59.801 47.619 10.35 0.00 39.21 2.71
469 470 0.589223 GGTTCGGCGTGAATTCAACA 59.411 50.000 10.35 0.00 39.21 3.33
470 471 0.589223 TGGTTCGGCGTGAATTCAAC 59.411 50.000 10.35 5.43 39.21 3.18
471 472 0.589223 GTGGTTCGGCGTGAATTCAA 59.411 50.000 10.35 0.00 39.21 2.69
472 473 1.561717 CGTGGTTCGGCGTGAATTCA 61.562 55.000 6.85 3.38 39.21 2.57
473 474 1.131826 CGTGGTTCGGCGTGAATTC 59.868 57.895 6.85 0.00 39.21 2.17
474 475 3.249999 CGTGGTTCGGCGTGAATT 58.750 55.556 6.85 0.00 39.21 2.17
483 484 0.380378 CCCATATTTGCCGTGGTTCG 59.620 55.000 0.00 0.00 39.52 3.95
484 485 0.102300 GCCCATATTTGCCGTGGTTC 59.898 55.000 0.00 0.00 0.00 3.62
485 486 1.326951 GGCCCATATTTGCCGTGGTT 61.327 55.000 0.00 0.00 38.00 3.67
486 487 1.756561 GGCCCATATTTGCCGTGGT 60.757 57.895 0.00 0.00 38.00 4.16
487 488 3.128375 GGCCCATATTTGCCGTGG 58.872 61.111 0.00 0.00 38.00 4.94
491 492 0.240945 CGAATCGGCCCATATTTGCC 59.759 55.000 0.00 2.66 44.41 4.52
492 493 0.387239 GCGAATCGGCCCATATTTGC 60.387 55.000 13.69 13.69 35.83 3.68
493 494 0.110238 CGCGAATCGGCCCATATTTG 60.110 55.000 0.00 0.00 33.78 2.32
494 495 1.852067 GCGCGAATCGGCCCATATTT 61.852 55.000 12.10 0.00 38.94 1.40
495 496 2.325082 GCGCGAATCGGCCCATATT 61.325 57.895 12.10 0.00 38.94 1.28
496 497 2.742372 GCGCGAATCGGCCCATAT 60.742 61.111 12.10 0.00 38.94 1.78
503 504 3.103911 GGTATCGGCGCGAATCGG 61.104 66.667 12.10 0.00 39.99 4.18
504 505 3.458579 CGGTATCGGCGCGAATCG 61.459 66.667 12.10 10.72 39.99 3.34
514 515 0.248866 GCAAAAATGGCCCGGTATCG 60.249 55.000 0.00 0.00 0.00 2.92
515 516 0.104120 GGCAAAAATGGCCCGGTATC 59.896 55.000 0.00 0.00 45.87 2.24
516 517 2.207580 GGCAAAAATGGCCCGGTAT 58.792 52.632 0.00 0.00 45.87 2.73
517 518 3.701454 GGCAAAAATGGCCCGGTA 58.299 55.556 0.00 0.00 45.87 4.02
523 524 1.671556 CCCACTTACGGCAAAAATGGC 60.672 52.381 0.00 0.00 0.00 4.40
524 525 1.671556 GCCCACTTACGGCAAAAATGG 60.672 52.381 0.00 0.00 46.27 3.16
525 526 1.708822 GCCCACTTACGGCAAAAATG 58.291 50.000 0.00 0.00 46.27 2.32
532 533 1.918868 CTTTTCGGCCCACTTACGGC 61.919 60.000 0.00 0.00 46.29 5.68
533 534 0.604511 ACTTTTCGGCCCACTTACGG 60.605 55.000 0.00 0.00 0.00 4.02
534 535 0.515564 CACTTTTCGGCCCACTTACG 59.484 55.000 0.00 0.00 0.00 3.18
535 536 0.879090 CCACTTTTCGGCCCACTTAC 59.121 55.000 0.00 0.00 0.00 2.34
536 537 0.891904 GCCACTTTTCGGCCCACTTA 60.892 55.000 0.00 0.00 44.22 2.24
537 538 2.200337 GCCACTTTTCGGCCCACTT 61.200 57.895 0.00 0.00 44.22 3.16
538 539 2.597510 GCCACTTTTCGGCCCACT 60.598 61.111 0.00 0.00 44.22 4.00
544 545 3.737172 CCAGGCGCCACTTTTCGG 61.737 66.667 31.54 12.74 0.00 4.30
545 546 3.737172 CCCAGGCGCCACTTTTCG 61.737 66.667 31.54 7.20 0.00 3.46
546 547 3.373565 CCCCAGGCGCCACTTTTC 61.374 66.667 31.54 0.00 0.00 2.29
575 576 4.419921 CTGGGGGCGGTTGGGTAC 62.420 72.222 0.00 0.00 0.00 3.34
576 577 4.660611 TCTGGGGGCGGTTGGGTA 62.661 66.667 0.00 0.00 0.00 3.69
585 586 0.036294 GTATAATCGGCTCTGGGGGC 60.036 60.000 0.00 0.00 0.00 5.80
586 587 0.613777 GGTATAATCGGCTCTGGGGG 59.386 60.000 0.00 0.00 0.00 5.40
587 588 0.246635 CGGTATAATCGGCTCTGGGG 59.753 60.000 0.00 0.00 0.00 4.96
588 589 0.389948 GCGGTATAATCGGCTCTGGG 60.390 60.000 0.00 0.00 0.00 4.45
589 590 3.123674 GCGGTATAATCGGCTCTGG 57.876 57.895 0.00 0.00 0.00 3.86
595 596 1.445582 GAGCCGGCGGTATAATCGG 60.446 63.158 28.82 0.00 44.70 4.18
596 597 1.800315 CGAGCCGGCGGTATAATCG 60.800 63.158 28.82 22.84 0.00 3.34
597 598 0.172803 ATCGAGCCGGCGGTATAATC 59.827 55.000 28.82 15.99 0.00 1.75
598 599 0.108804 CATCGAGCCGGCGGTATAAT 60.109 55.000 28.82 13.54 0.00 1.28
599 600 1.287815 CATCGAGCCGGCGGTATAA 59.712 57.895 28.82 11.69 0.00 0.98
600 601 2.959372 CATCGAGCCGGCGGTATA 59.041 61.111 28.82 11.30 0.00 1.47
601 602 4.664677 GCATCGAGCCGGCGGTAT 62.665 66.667 28.82 17.06 37.23 2.73
610 611 2.301577 ACCTGTTTAGAGCATCGAGC 57.698 50.000 0.00 0.00 42.67 5.03
611 612 2.932614 CCAACCTGTTTAGAGCATCGAG 59.067 50.000 0.00 0.00 42.67 4.04
612 613 2.301870 ACCAACCTGTTTAGAGCATCGA 59.698 45.455 0.00 0.00 42.67 3.59
613 614 2.673368 GACCAACCTGTTTAGAGCATCG 59.327 50.000 0.00 0.00 42.67 3.84
614 615 3.944087 AGACCAACCTGTTTAGAGCATC 58.056 45.455 0.00 0.00 0.00 3.91
615 616 5.431765 CATAGACCAACCTGTTTAGAGCAT 58.568 41.667 0.00 0.00 0.00 3.79
616 617 4.832248 CATAGACCAACCTGTTTAGAGCA 58.168 43.478 0.00 0.00 0.00 4.26
617 618 3.623510 GCATAGACCAACCTGTTTAGAGC 59.376 47.826 0.00 0.00 0.00 4.09
618 619 4.832248 TGCATAGACCAACCTGTTTAGAG 58.168 43.478 0.00 0.00 0.00 2.43
619 620 4.901197 TGCATAGACCAACCTGTTTAGA 57.099 40.909 0.00 0.00 0.00 2.10
620 621 6.515272 AAATGCATAGACCAACCTGTTTAG 57.485 37.500 0.00 0.00 0.00 1.85
621 622 6.909550 AAAATGCATAGACCAACCTGTTTA 57.090 33.333 0.00 0.00 0.00 2.01
622 623 5.806654 AAAATGCATAGACCAACCTGTTT 57.193 34.783 0.00 0.00 0.00 2.83
623 624 5.511202 CCAAAAATGCATAGACCAACCTGTT 60.511 40.000 0.00 0.00 0.00 3.16
624 625 4.021192 CCAAAAATGCATAGACCAACCTGT 60.021 41.667 0.00 0.00 0.00 4.00
625 626 4.021192 ACCAAAAATGCATAGACCAACCTG 60.021 41.667 0.00 0.00 0.00 4.00
630 631 2.830923 CCCACCAAAAATGCATAGACCA 59.169 45.455 0.00 0.00 0.00 4.02
639 640 5.420104 AGCTTTATCTCTCCCACCAAAAATG 59.580 40.000 0.00 0.00 0.00 2.32
640 641 5.583932 AGCTTTATCTCTCCCACCAAAAAT 58.416 37.500 0.00 0.00 0.00 1.82
642 643 4.657814 AGCTTTATCTCTCCCACCAAAA 57.342 40.909 0.00 0.00 0.00 2.44
647 648 6.645306 ACTTTAGAAGCTTTATCTCTCCCAC 58.355 40.000 0.00 0.00 0.00 4.61
651 652 6.270064 AGCGACTTTAGAAGCTTTATCTCTC 58.730 40.000 0.00 0.00 36.41 3.20
666 667 3.125829 ACGAGTCATACGAAGCGACTTTA 59.874 43.478 0.00 0.00 40.04 1.85
667 668 2.095364 ACGAGTCATACGAAGCGACTTT 60.095 45.455 0.00 0.00 40.04 2.66
681 682 5.172934 GGTTGGTATGAATAACACGAGTCA 58.827 41.667 0.00 0.00 27.88 3.41
693 694 3.195471 TGTGTTCACGGTTGGTATGAA 57.805 42.857 0.00 0.00 0.00 2.57
696 697 6.646267 ACTATATTGTGTTCACGGTTGGTAT 58.354 36.000 0.00 0.00 0.00 2.73
727 728 9.343539 ACTCTGAGTTCAAACTTAGCTAAAAAT 57.656 29.630 7.74 0.00 41.07 1.82
744 746 5.594725 TCAGACAACAGTTCTACTCTGAGTT 59.405 40.000 16.53 0.37 36.81 3.01
745 747 5.133941 TCAGACAACAGTTCTACTCTGAGT 58.866 41.667 15.57 15.57 36.81 3.41
746 748 5.697473 TCAGACAACAGTTCTACTCTGAG 57.303 43.478 2.45 2.45 36.81 3.35
747 749 6.656632 AATCAGACAACAGTTCTACTCTGA 57.343 37.500 10.09 10.09 37.39 3.27
748 750 7.032580 CCTAATCAGACAACAGTTCTACTCTG 58.967 42.308 0.00 0.00 38.68 3.35
759 765 1.207089 CCCGAGCCTAATCAGACAACA 59.793 52.381 0.00 0.00 0.00 3.33
763 769 4.760757 GCCCGAGCCTAATCAGAC 57.239 61.111 0.00 0.00 0.00 3.51
778 784 6.538945 TTCAATAATAACTTTTGGGAGGCC 57.461 37.500 0.00 0.00 0.00 5.19
797 803 9.123902 CCATACAATCTTCCTTACATGATTCAA 57.876 33.333 0.00 0.00 0.00 2.69
798 804 8.274322 ACCATACAATCTTCCTTACATGATTCA 58.726 33.333 0.00 0.00 0.00 2.57
799 805 8.682936 ACCATACAATCTTCCTTACATGATTC 57.317 34.615 0.00 0.00 0.00 2.52
800 806 8.906867 CAACCATACAATCTTCCTTACATGATT 58.093 33.333 0.00 0.00 0.00 2.57
801 807 8.274322 TCAACCATACAATCTTCCTTACATGAT 58.726 33.333 0.00 0.00 0.00 2.45
802 808 7.629157 TCAACCATACAATCTTCCTTACATGA 58.371 34.615 0.00 0.00 0.00 3.07
803 809 7.864108 TCAACCATACAATCTTCCTTACATG 57.136 36.000 0.00 0.00 0.00 3.21
915 925 6.451393 TCGAAAATACTTGTTGGGAAAATGG 58.549 36.000 0.00 0.00 0.00 3.16
916 926 7.938563 TTCGAAAATACTTGTTGGGAAAATG 57.061 32.000 0.00 0.00 0.00 2.32
922 932 5.335661 CCTCCTTTCGAAAATACTTGTTGGG 60.336 44.000 12.41 5.67 0.00 4.12
927 937 6.803154 ACTTCCTCCTTTCGAAAATACTTG 57.197 37.500 12.41 0.00 0.00 3.16
936 946 9.428097 GTAAAAACTTATACTTCCTCCTTTCGA 57.572 33.333 0.00 0.00 0.00 3.71
1116 1132 1.454295 GGAGAGACGGGGAGGAGTC 60.454 68.421 0.00 0.00 37.63 3.36
1393 1418 3.637273 GACGGGGTTCCACTGGCT 61.637 66.667 0.00 0.00 0.00 4.75
1460 1491 3.006644 GTCGGGTAATCTAGGGTTGGATC 59.993 52.174 0.00 0.00 0.00 3.36
1986 2038 2.580867 CGCACGTAGAGCTCCAGC 60.581 66.667 10.93 6.74 43.35 4.85
2091 2143 2.584608 CCCTTCTCCCGCACGATT 59.415 61.111 0.00 0.00 0.00 3.34
2172 2224 3.319198 GGGAACTCGAGGGGCACA 61.319 66.667 18.41 0.00 0.00 4.57
2296 2348 2.556622 CCGAAGCAAAAGGTGTGGTAAT 59.443 45.455 0.00 0.00 0.00 1.89
2297 2349 1.950909 CCGAAGCAAAAGGTGTGGTAA 59.049 47.619 0.00 0.00 0.00 2.85
2417 2785 1.278985 AGGATCACACCAATCGCTTCA 59.721 47.619 0.00 0.00 0.00 3.02
2594 3286 8.812329 CATACAACAGTTAACTCTCTATTCAGC 58.188 37.037 4.77 0.00 0.00 4.26
2600 3292 7.231925 TGACCACATACAACAGTTAACTCTCTA 59.768 37.037 4.77 0.00 0.00 2.43
2675 3370 5.121925 TCTGACATCTATAACGGCTATCGAC 59.878 44.000 0.00 0.00 42.43 4.20
2709 3404 1.705256 GCGACATACGAAGGTGTTGA 58.295 50.000 0.00 0.00 45.77 3.18
2710 3405 0.365523 CGCGACATACGAAGGTGTTG 59.634 55.000 0.00 0.00 45.77 3.33
2712 3407 0.454600 ATCGCGACATACGAAGGTGT 59.545 50.000 12.93 0.00 43.71 4.16
2713 3408 2.394545 TATCGCGACATACGAAGGTG 57.605 50.000 12.93 0.00 43.71 4.00
2714 3409 4.959596 ATATATCGCGACATACGAAGGT 57.040 40.909 12.93 0.00 43.71 3.50
2715 3410 4.433624 CGAATATATCGCGACATACGAAGG 59.566 45.833 12.93 0.00 45.89 3.46
2716 3411 5.512401 CGAATATATCGCGACATACGAAG 57.488 43.478 12.93 0.00 45.89 3.79
3202 3932 9.119329 GGATATCAAATATATCGCGACATAGAC 57.881 37.037 12.93 0.00 33.08 2.59
3505 4238 1.355066 GGTTTGGCTCTCTTCGCTCG 61.355 60.000 0.00 0.00 0.00 5.03
3598 4331 5.700832 CAGTATTTGAACTGCAGAACTGGTA 59.299 40.000 23.35 3.69 40.40 3.25
3628 4361 5.504665 GCTGGATCCATGTCAAAATTCGTAG 60.505 44.000 16.63 0.00 0.00 3.51
3663 4396 6.543100 AGAAAGACTTCCTACTAGTCCATACG 59.457 42.308 0.00 0.00 42.35 3.06
3673 4406 2.835156 GAGCCCAGAAAGACTTCCTACT 59.165 50.000 0.00 0.00 31.28 2.57
4009 4776 9.953697 AGATTACAGAAACTATAACTCGACATC 57.046 33.333 0.00 0.00 0.00 3.06
4049 4817 5.582689 AAAGCATGGCCAAATACTAGAAC 57.417 39.130 10.96 0.00 0.00 3.01
4056 4824 2.902486 TCCACAAAAGCATGGCCAAATA 59.098 40.909 10.96 0.00 35.81 1.40
4109 4880 6.039270 GCATACAACAGGCAAACCAAGATATA 59.961 38.462 0.00 0.00 39.06 0.86
4129 4900 4.931002 ACCAAATTTTGTGATGCTGCATAC 59.069 37.500 16.23 13.78 0.00 2.39
4263 5070 1.343465 CCTAGACGTTCACCCAACACT 59.657 52.381 0.00 0.00 34.20 3.55
4271 5078 0.528470 AGCTCTGCCTAGACGTTCAC 59.472 55.000 0.00 0.00 0.00 3.18
4279 5086 3.118482 TCATTTCCTGAAGCTCTGCCTAG 60.118 47.826 0.00 0.00 0.00 3.02
4289 5100 5.443185 TCAAGCAAGTTCATTTCCTGAAG 57.557 39.130 0.00 0.00 44.44 3.02
4292 5103 4.219070 TCCATCAAGCAAGTTCATTTCCTG 59.781 41.667 0.00 0.00 0.00 3.86
4311 5122 6.840780 AGCAAGTTTTATAAAGTGCTCCAT 57.159 33.333 19.48 6.07 0.00 3.41
4325 5136 8.523658 AGAAAAGAACTGTAAGAAGCAAGTTTT 58.476 29.630 0.00 0.00 37.43 2.43
4327 5138 7.201741 GGAGAAAAGAACTGTAAGAAGCAAGTT 60.202 37.037 0.00 0.00 37.43 2.66
4376 5187 9.004231 ACAAGGGAGTAGATAATACCAAGAAAT 57.996 33.333 0.00 0.00 0.00 2.17
4377 5188 8.388656 ACAAGGGAGTAGATAATACCAAGAAA 57.611 34.615 0.00 0.00 0.00 2.52
4378 5189 7.070821 GGACAAGGGAGTAGATAATACCAAGAA 59.929 40.741 0.00 0.00 0.00 2.52
4379 5190 6.553852 GGACAAGGGAGTAGATAATACCAAGA 59.446 42.308 0.00 0.00 0.00 3.02
4380 5191 6.326583 TGGACAAGGGAGTAGATAATACCAAG 59.673 42.308 0.00 0.00 0.00 3.61
4381 5192 6.206787 TGGACAAGGGAGTAGATAATACCAA 58.793 40.000 0.00 0.00 0.00 3.67
4382 5193 5.784023 TGGACAAGGGAGTAGATAATACCA 58.216 41.667 0.00 0.00 0.00 3.25
4383 5194 6.075984 TCTGGACAAGGGAGTAGATAATACC 58.924 44.000 0.00 0.00 0.00 2.73
4384 5195 7.598759 TTCTGGACAAGGGAGTAGATAATAC 57.401 40.000 0.00 0.00 0.00 1.89
4385 5196 8.798975 AATTCTGGACAAGGGAGTAGATAATA 57.201 34.615 0.00 0.00 0.00 0.98
4386 5197 7.698163 AATTCTGGACAAGGGAGTAGATAAT 57.302 36.000 0.00 0.00 0.00 1.28
4387 5198 7.844779 AGTAATTCTGGACAAGGGAGTAGATAA 59.155 37.037 0.00 0.00 0.00 1.75
4388 5199 7.363031 AGTAATTCTGGACAAGGGAGTAGATA 58.637 38.462 0.00 0.00 0.00 1.98
4389 5200 6.206042 AGTAATTCTGGACAAGGGAGTAGAT 58.794 40.000 0.00 0.00 0.00 1.98
4390 5201 5.590818 AGTAATTCTGGACAAGGGAGTAGA 58.409 41.667 0.00 0.00 0.00 2.59
4391 5202 5.941555 AGTAATTCTGGACAAGGGAGTAG 57.058 43.478 0.00 0.00 0.00 2.57
4392 5203 5.546499 ACAAGTAATTCTGGACAAGGGAGTA 59.454 40.000 0.00 0.00 0.00 2.59
4393 5204 4.351111 ACAAGTAATTCTGGACAAGGGAGT 59.649 41.667 0.00 0.00 0.00 3.85
4394 5205 4.911390 ACAAGTAATTCTGGACAAGGGAG 58.089 43.478 0.00 0.00 0.00 4.30
4395 5206 4.993705 ACAAGTAATTCTGGACAAGGGA 57.006 40.909 0.00 0.00 0.00 4.20
4396 5207 4.827284 ACAACAAGTAATTCTGGACAAGGG 59.173 41.667 0.00 0.00 0.00 3.95
4397 5208 6.934645 TCTACAACAAGTAATTCTGGACAAGG 59.065 38.462 0.00 0.00 30.92 3.61
4398 5209 7.962964 TCTACAACAAGTAATTCTGGACAAG 57.037 36.000 0.00 0.00 30.92 3.16
4399 5210 8.740123 TTTCTACAACAAGTAATTCTGGACAA 57.260 30.769 0.00 0.00 30.92 3.18
4400 5211 8.783093 CATTTCTACAACAAGTAATTCTGGACA 58.217 33.333 0.00 0.00 30.92 4.02
4401 5212 8.237267 CCATTTCTACAACAAGTAATTCTGGAC 58.763 37.037 0.00 0.00 30.92 4.02
4402 5213 8.160765 TCCATTTCTACAACAAGTAATTCTGGA 58.839 33.333 0.00 0.00 31.38 3.86
4403 5214 8.335532 TCCATTTCTACAACAAGTAATTCTGG 57.664 34.615 0.00 0.00 30.92 3.86
4404 5215 9.778993 CATCCATTTCTACAACAAGTAATTCTG 57.221 33.333 0.00 0.00 30.92 3.02
4405 5216 9.520515 ACATCCATTTCTACAACAAGTAATTCT 57.479 29.630 0.00 0.00 30.92 2.40
4411 5222 9.823647 CTAGATACATCCATTTCTACAACAAGT 57.176 33.333 0.00 0.00 0.00 3.16
4413 5224 9.817809 GTCTAGATACATCCATTTCTACAACAA 57.182 33.333 0.00 0.00 0.00 2.83
4414 5225 8.135529 CGTCTAGATACATCCATTTCTACAACA 58.864 37.037 0.00 0.00 0.00 3.33
4415 5226 8.136165 ACGTCTAGATACATCCATTTCTACAAC 58.864 37.037 0.00 0.00 0.00 3.32
4416 5227 8.234136 ACGTCTAGATACATCCATTTCTACAA 57.766 34.615 0.00 0.00 0.00 2.41
4417 5228 7.818997 ACGTCTAGATACATCCATTTCTACA 57.181 36.000 0.00 0.00 0.00 2.74
4468 5279 6.292919 GGATTACTTGTCGCAGAAATGGATAC 60.293 42.308 0.00 0.00 39.69 2.24
4469 5280 5.758296 GGATTACTTGTCGCAGAAATGGATA 59.242 40.000 0.00 0.00 39.69 2.59
4470 5281 4.576463 GGATTACTTGTCGCAGAAATGGAT 59.424 41.667 0.00 0.00 39.69 3.41
4471 5282 3.938963 GGATTACTTGTCGCAGAAATGGA 59.061 43.478 0.00 0.00 39.69 3.41
4472 5283 3.242413 CGGATTACTTGTCGCAGAAATGG 60.242 47.826 0.00 0.00 39.69 3.16
4473 5284 3.242413 CCGGATTACTTGTCGCAGAAATG 60.242 47.826 0.00 0.00 39.69 2.32
4474 5285 2.936498 CCGGATTACTTGTCGCAGAAAT 59.064 45.455 0.00 0.00 39.69 2.17
4475 5286 2.343101 CCGGATTACTTGTCGCAGAAA 58.657 47.619 0.00 0.00 39.69 2.52
4476 5287 1.404986 CCCGGATTACTTGTCGCAGAA 60.405 52.381 0.73 0.00 39.69 3.02
4477 5288 0.174845 CCCGGATTACTTGTCGCAGA 59.825 55.000 0.73 0.00 0.00 4.26
4478 5289 0.174845 TCCCGGATTACTTGTCGCAG 59.825 55.000 0.73 0.00 0.00 5.18
4479 5290 0.108520 GTCCCGGATTACTTGTCGCA 60.109 55.000 0.73 0.00 0.00 5.10
4480 5291 1.143969 CGTCCCGGATTACTTGTCGC 61.144 60.000 0.73 0.00 0.00 5.19
4481 5292 2.953669 CGTCCCGGATTACTTGTCG 58.046 57.895 0.73 0.00 0.00 4.35
4493 5304 2.584261 TACTCTCTCCGTCCGTCCCG 62.584 65.000 0.00 0.00 0.00 5.14
4494 5305 0.179023 ATACTCTCTCCGTCCGTCCC 60.179 60.000 0.00 0.00 0.00 4.46
4495 5306 1.677942 AATACTCTCTCCGTCCGTCC 58.322 55.000 0.00 0.00 0.00 4.79
4496 5307 7.041916 CCATATATAATACTCTCTCCGTCCGTC 60.042 44.444 0.00 0.00 0.00 4.79
4497 5308 6.766944 CCATATATAATACTCTCTCCGTCCGT 59.233 42.308 0.00 0.00 0.00 4.69
4498 5309 6.205076 CCCATATATAATACTCTCTCCGTCCG 59.795 46.154 0.00 0.00 0.00 4.79
4499 5310 6.490721 CCCCATATATAATACTCTCTCCGTCC 59.509 46.154 0.00 0.00 0.00 4.79
4500 5311 7.288560 TCCCCATATATAATACTCTCTCCGTC 58.711 42.308 0.00 0.00 0.00 4.79
4501 5312 7.222180 TCCCCATATATAATACTCTCTCCGT 57.778 40.000 0.00 0.00 0.00 4.69
4502 5313 7.255173 CGTTCCCCATATATAATACTCTCTCCG 60.255 44.444 0.00 0.00 0.00 4.63
4503 5314 7.560626 ACGTTCCCCATATATAATACTCTCTCC 59.439 40.741 0.00 0.00 0.00 3.71
4504 5315 8.522542 ACGTTCCCCATATATAATACTCTCTC 57.477 38.462 0.00 0.00 0.00 3.20
4505 5316 7.282675 CGACGTTCCCCATATATAATACTCTCT 59.717 40.741 0.00 0.00 0.00 3.10
4506 5317 7.281774 TCGACGTTCCCCATATATAATACTCTC 59.718 40.741 0.00 0.00 0.00 3.20
4507 5318 7.114754 TCGACGTTCCCCATATATAATACTCT 58.885 38.462 0.00 0.00 0.00 3.24
4508 5319 7.066766 ACTCGACGTTCCCCATATATAATACTC 59.933 40.741 0.00 0.00 0.00 2.59
4509 5320 6.888632 ACTCGACGTTCCCCATATATAATACT 59.111 38.462 0.00 0.00 0.00 2.12
4510 5321 7.093322 ACTCGACGTTCCCCATATATAATAC 57.907 40.000 0.00 0.00 0.00 1.89
4511 5322 7.707624 AACTCGACGTTCCCCATATATAATA 57.292 36.000 0.00 0.00 0.00 0.98
4512 5323 6.600882 AACTCGACGTTCCCCATATATAAT 57.399 37.500 0.00 0.00 0.00 1.28
4513 5324 6.017400 GAACTCGACGTTCCCCATATATAA 57.983 41.667 13.53 0.00 45.00 0.98
4514 5325 5.633830 GAACTCGACGTTCCCCATATATA 57.366 43.478 13.53 0.00 45.00 0.86
4515 5326 4.516365 GAACTCGACGTTCCCCATATAT 57.484 45.455 13.53 0.00 45.00 0.86
4516 5327 3.996150 GAACTCGACGTTCCCCATATA 57.004 47.619 13.53 0.00 45.00 0.86
4517 5328 2.884894 GAACTCGACGTTCCCCATAT 57.115 50.000 13.53 0.00 45.00 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.