Multiple sequence alignment - TraesCS5D01G541800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G541800 chr5D 100.000 3968 0 0 1 3968 552445237 552441270 0.000000e+00 7328.0
1 TraesCS5D01G541800 chr5D 86.777 242 28 4 3089 3327 552420419 552420179 2.350000e-67 267.0
2 TraesCS5D01G541800 chr5D 77.184 412 81 12 1973 2374 537216839 537217247 1.110000e-55 228.0
3 TraesCS5D01G541800 chr5D 87.179 195 21 3 2827 3018 552420821 552420628 6.680000e-53 219.0
4 TraesCS5D01G541800 chr5D 97.059 102 1 1 3326 3427 30613906 30614005 1.900000e-38 171.0
5 TraesCS5D01G541800 chr5D 75.487 359 73 11 1077 1429 552422797 552422448 1.140000e-35 161.0
6 TraesCS5D01G541800 chr5D 86.466 133 12 3 3428 3555 478461247 478461116 1.490000e-29 141.0
7 TraesCS5D01G541800 chr5D 80.851 141 23 3 1043 1182 543503748 543503611 1.510000e-19 108.0
8 TraesCS5D01G541800 chr1B 85.097 2429 306 35 779 3174 327487059 327489464 0.000000e+00 2429.0
9 TraesCS5D01G541800 chr1B 83.542 559 72 12 3 553 327486154 327486700 4.580000e-139 505.0
10 TraesCS5D01G541800 chr1D 86.000 1950 240 20 779 2708 227867094 227869030 0.000000e+00 2058.0
11 TraesCS5D01G541800 chr1D 86.727 1213 156 4 779 1988 208239528 208238318 0.000000e+00 1343.0
12 TraesCS5D01G541800 chr1D 82.988 1205 164 25 1993 3174 208202660 208201474 0.000000e+00 1051.0
13 TraesCS5D01G541800 chr1D 84.838 554 66 11 6 553 208240169 208239628 3.490000e-150 542.0
14 TraesCS5D01G541800 chr1D 84.324 555 62 14 7 553 227866171 227866708 1.630000e-143 520.0
15 TraesCS5D01G541800 chr1D 95.238 105 5 0 2747 2851 227869032 227869136 2.450000e-37 167.0
16 TraesCS5D01G541800 chr1A 87.411 1676 207 4 779 2453 295465840 295467512 0.000000e+00 1923.0
17 TraesCS5D01G541800 chr1A 85.766 555 64 9 3 553 295464912 295465455 1.240000e-159 573.0
18 TraesCS5D01G541800 chr1A 79.238 761 110 28 2443 3174 295517172 295517913 1.660000e-133 486.0
19 TraesCS5D01G541800 chr1A 100.000 94 0 0 3335 3428 445930225 445930132 1.470000e-39 174.0
20 TraesCS5D01G541800 chr1A 97.959 98 2 0 3330 3427 549119553 549119650 1.900000e-38 171.0
21 TraesCS5D01G541800 chr5A 94.343 548 24 3 3428 3968 536286492 536287039 0.000000e+00 833.0
22 TraesCS5D01G541800 chr5A 91.058 548 35 7 3431 3968 534584427 534584970 0.000000e+00 728.0
23 TraesCS5D01G541800 chr3A 91.978 536 36 3 3440 3968 158167026 158166491 0.000000e+00 745.0
24 TraesCS5D01G541800 chr4D 91.408 547 40 4 3428 3968 251423489 251424034 0.000000e+00 743.0
25 TraesCS5D01G541800 chr4D 81.921 354 51 9 3428 3773 440385381 440385033 1.800000e-73 287.0
26 TraesCS5D01G541800 chr4D 85.075 67 9 1 473 538 506346931 506346997 2.560000e-07 67.6
27 TraesCS5D01G541800 chr3B 93.439 503 27 5 3468 3968 810545350 810544852 0.000000e+00 741.0
28 TraesCS5D01G541800 chr3B 91.650 503 41 1 3464 3965 734477930 734477428 0.000000e+00 695.0
29 TraesCS5D01G541800 chr3B 84.746 59 9 0 476 534 477364270 477364328 4.280000e-05 60.2
30 TraesCS5D01G541800 chr6A 91.865 504 38 1 3468 3968 234173142 234172639 0.000000e+00 701.0
31 TraesCS5D01G541800 chr4A 76.857 579 114 14 1809 2374 616839988 616839417 3.850000e-80 309.0
32 TraesCS5D01G541800 chr4A 75.891 589 118 18 1803 2374 616885286 616884705 3.020000e-71 279.0
33 TraesCS5D01G541800 chr4A 74.727 550 120 17 1748 2286 616229932 616229391 1.110000e-55 228.0
34 TraesCS5D01G541800 chr4A 80.214 187 37 0 1093 1279 616897505 616897319 1.490000e-29 141.0
35 TraesCS5D01G541800 chr5B 76.967 521 108 11 1864 2374 677812796 677813314 1.800000e-73 287.0
36 TraesCS5D01G541800 chr5B 76.259 556 107 19 1791 2340 685504419 685504955 5.050000e-69 272.0
37 TraesCS5D01G541800 chr5B 75.507 592 114 22 1803 2374 699354723 699355303 1.090000e-65 261.0
38 TraesCS5D01G541800 chr5B 76.626 492 104 9 1799 2286 703716856 703717340 1.090000e-65 261.0
39 TraesCS5D01G541800 chr5B 76.096 502 105 12 1791 2286 685322424 685321932 8.510000e-62 248.0
40 TraesCS5D01G541800 chr5B 75.233 537 108 20 1748 2270 700229028 700228503 8.580000e-57 231.0
41 TraesCS5D01G541800 chr5B 76.038 313 60 9 1042 1352 685323111 685322812 8.880000e-32 148.0
42 TraesCS5D01G541800 chr5B 78.333 240 40 7 1042 1279 685503732 685503961 1.150000e-30 145.0
43 TraesCS5D01G541800 chr2D 89.831 177 17 1 3661 3836 2567158 2566982 3.990000e-55 226.0
44 TraesCS5D01G541800 chr6B 100.000 94 0 0 3334 3427 706995395 706995302 1.470000e-39 174.0
45 TraesCS5D01G541800 chr6B 93.103 58 4 0 3911 3968 719748492 719748549 7.070000e-13 86.1
46 TraesCS5D01G541800 chr2B 98.980 98 0 1 3331 3427 57884578 57884481 1.470000e-39 174.0
47 TraesCS5D01G541800 chr2B 98.958 96 1 0 3332 3427 653671191 653671286 5.270000e-39 172.0
48 TraesCS5D01G541800 chrUn 98.958 96 1 0 3332 3427 79765330 79765425 5.270000e-39 172.0
49 TraesCS5D01G541800 chrUn 96.970 33 1 0 503 535 282486920 282486888 5.540000e-04 56.5
50 TraesCS5D01G541800 chrUn 96.970 33 1 0 503 535 307153120 307153088 5.540000e-04 56.5
51 TraesCS5D01G541800 chr7B 98.969 97 0 1 3332 3427 704405836 704405740 5.270000e-39 172.0
52 TraesCS5D01G541800 chr7B 78.912 147 19 7 475 612 186819135 186819278 5.460000e-14 89.8
53 TraesCS5D01G541800 chr7D 93.578 109 5 2 3318 3426 561540616 561540722 1.140000e-35 161.0
54 TraesCS5D01G541800 chr3D 93.103 58 4 0 3911 3968 601183283 601183226 7.070000e-13 86.1
55 TraesCS5D01G541800 chr6D 89.655 58 5 1 479 535 450126285 450126342 5.500000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G541800 chr5D 552441270 552445237 3967 True 7328.000000 7328 100.000000 1 3968 1 chr5D.!!$R3 3967
1 TraesCS5D01G541800 chr5D 552420179 552422797 2618 True 215.666667 267 83.147667 1077 3327 3 chr5D.!!$R4 2250
2 TraesCS5D01G541800 chr1B 327486154 327489464 3310 False 1467.000000 2429 84.319500 3 3174 2 chr1B.!!$F1 3171
3 TraesCS5D01G541800 chr1D 208201474 208202660 1186 True 1051.000000 1051 82.988000 1993 3174 1 chr1D.!!$R1 1181
4 TraesCS5D01G541800 chr1D 208238318 208240169 1851 True 942.500000 1343 85.782500 6 1988 2 chr1D.!!$R2 1982
5 TraesCS5D01G541800 chr1D 227866171 227869136 2965 False 915.000000 2058 88.520667 7 2851 3 chr1D.!!$F1 2844
6 TraesCS5D01G541800 chr1A 295464912 295467512 2600 False 1248.000000 1923 86.588500 3 2453 2 chr1A.!!$F3 2450
7 TraesCS5D01G541800 chr1A 295517172 295517913 741 False 486.000000 486 79.238000 2443 3174 1 chr1A.!!$F1 731
8 TraesCS5D01G541800 chr5A 536286492 536287039 547 False 833.000000 833 94.343000 3428 3968 1 chr5A.!!$F2 540
9 TraesCS5D01G541800 chr5A 534584427 534584970 543 False 728.000000 728 91.058000 3431 3968 1 chr5A.!!$F1 537
10 TraesCS5D01G541800 chr3A 158166491 158167026 535 True 745.000000 745 91.978000 3440 3968 1 chr3A.!!$R1 528
11 TraesCS5D01G541800 chr4D 251423489 251424034 545 False 743.000000 743 91.408000 3428 3968 1 chr4D.!!$F1 540
12 TraesCS5D01G541800 chr3B 734477428 734477930 502 True 695.000000 695 91.650000 3464 3965 1 chr3B.!!$R1 501
13 TraesCS5D01G541800 chr6A 234172639 234173142 503 True 701.000000 701 91.865000 3468 3968 1 chr6A.!!$R1 500
14 TraesCS5D01G541800 chr4A 616839417 616839988 571 True 309.000000 309 76.857000 1809 2374 1 chr4A.!!$R2 565
15 TraesCS5D01G541800 chr4A 616884705 616885286 581 True 279.000000 279 75.891000 1803 2374 1 chr4A.!!$R3 571
16 TraesCS5D01G541800 chr4A 616229391 616229932 541 True 228.000000 228 74.727000 1748 2286 1 chr4A.!!$R1 538
17 TraesCS5D01G541800 chr5B 677812796 677813314 518 False 287.000000 287 76.967000 1864 2374 1 chr5B.!!$F1 510
18 TraesCS5D01G541800 chr5B 699354723 699355303 580 False 261.000000 261 75.507000 1803 2374 1 chr5B.!!$F2 571
19 TraesCS5D01G541800 chr5B 700228503 700229028 525 True 231.000000 231 75.233000 1748 2270 1 chr5B.!!$R1 522
20 TraesCS5D01G541800 chr5B 685503732 685504955 1223 False 208.500000 272 77.296000 1042 2340 2 chr5B.!!$F4 1298

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
758 940 0.108804 GAGTCGAATGCGGTGGAGAA 60.109 55.0 0.0 0.0 38.28 2.87 F
1465 1656 0.109458 CCACGGAGTTCATCGTTCGA 60.109 55.0 0.0 0.0 41.61 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1653 1844 0.173935 CAAGGACACACCCGCGTATA 59.826 55.0 4.92 0.0 40.05 1.47 R
3417 4201 0.107654 CTCCGCCCCTCTTTGTAAGG 60.108 60.0 0.00 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 50 1.878102 GCATGAAGACCGTGGTCACTT 60.878 52.381 20.51 7.46 46.76 3.16
61 63 2.105128 CACTTCCGCCTAGCCTCG 59.895 66.667 0.00 0.00 0.00 4.63
64 66 2.361992 TTCCGCCTAGCCTCGTCA 60.362 61.111 0.00 0.00 0.00 4.35
65 67 1.945354 CTTCCGCCTAGCCTCGTCAA 61.945 60.000 0.00 0.00 0.00 3.18
73 75 2.288702 CCTAGCCTCGTCAATCCATCTG 60.289 54.545 0.00 0.00 0.00 2.90
86 88 7.359849 CGTCAATCCATCTGTAGCATTGATTAG 60.360 40.741 0.00 0.00 36.22 1.73
96 98 7.011389 TCTGTAGCATTGATTAGTGTTGTATGC 59.989 37.037 0.00 0.00 37.70 3.14
114 116 6.804677 TGTATGCTGTCTGTTGTTTGATTTT 58.195 32.000 0.00 0.00 0.00 1.82
119 121 7.319646 TGCTGTCTGTTGTTTGATTTTAACTT 58.680 30.769 0.00 0.00 0.00 2.66
120 122 7.275341 TGCTGTCTGTTGTTTGATTTTAACTTG 59.725 33.333 0.00 0.00 0.00 3.16
121 123 7.487829 GCTGTCTGTTGTTTGATTTTAACTTGA 59.512 33.333 0.00 0.00 0.00 3.02
122 124 9.352784 CTGTCTGTTGTTTGATTTTAACTTGAA 57.647 29.630 0.00 0.00 0.00 2.69
123 125 9.868277 TGTCTGTTGTTTGATTTTAACTTGAAT 57.132 25.926 0.00 0.00 0.00 2.57
137 139 4.621068 ACTTGAATATCATGCGTGTTGG 57.379 40.909 5.68 0.00 0.00 3.77
139 141 4.458989 ACTTGAATATCATGCGTGTTGGTT 59.541 37.500 5.68 0.00 0.00 3.67
141 143 6.150307 ACTTGAATATCATGCGTGTTGGTTTA 59.850 34.615 5.68 0.00 0.00 2.01
144 146 7.192913 TGAATATCATGCGTGTTGGTTTATTC 58.807 34.615 5.68 10.24 0.00 1.75
147 149 3.818210 TCATGCGTGTTGGTTTATTCTGT 59.182 39.130 5.68 0.00 0.00 3.41
156 158 8.661257 CGTGTTGGTTTATTCTGTCATATGTAA 58.339 33.333 1.90 0.00 0.00 2.41
252 255 5.633830 ATTGTGTCTGGTTTATTCAGCAG 57.366 39.130 0.00 0.00 42.62 4.24
280 283 5.705609 TTGGTTACAAGAAAATGAGAGGC 57.294 39.130 0.00 0.00 31.73 4.70
492 498 8.697292 ACAACTATTTGGGTTTTGCTTTAGTAA 58.303 29.630 0.00 0.00 37.00 2.24
493 499 9.535878 CAACTATTTGGGTTTTGCTTTAGTAAA 57.464 29.630 0.00 0.00 0.00 2.01
501 507 5.539574 GGTTTTGCTTTAGTAAACCCCCTTA 59.460 40.000 13.26 0.00 43.09 2.69
502 508 6.041865 GGTTTTGCTTTAGTAAACCCCCTTAA 59.958 38.462 13.26 0.00 43.09 1.85
503 509 7.418827 GGTTTTGCTTTAGTAAACCCCCTTAAA 60.419 37.037 13.26 0.00 43.09 1.52
578 595 9.020731 TCAACTAATTGTAATCCTTTCTTTCCC 57.979 33.333 0.00 0.00 37.11 3.97
579 596 8.802267 CAACTAATTGTAATCCTTTCTTTCCCA 58.198 33.333 0.00 0.00 0.00 4.37
580 597 8.950007 ACTAATTGTAATCCTTTCTTTCCCAA 57.050 30.769 0.00 0.00 0.00 4.12
581 598 9.547279 ACTAATTGTAATCCTTTCTTTCCCAAT 57.453 29.630 0.00 0.00 0.00 3.16
583 600 5.659440 TGTAATCCTTTCTTTCCCAATGC 57.341 39.130 0.00 0.00 0.00 3.56
584 601 5.083122 TGTAATCCTTTCTTTCCCAATGCA 58.917 37.500 0.00 0.00 0.00 3.96
585 602 5.721000 TGTAATCCTTTCTTTCCCAATGCAT 59.279 36.000 0.00 0.00 0.00 3.96
586 603 5.767277 AATCCTTTCTTTCCCAATGCATT 57.233 34.783 5.99 5.99 0.00 3.56
587 604 6.872585 AATCCTTTCTTTCCCAATGCATTA 57.127 33.333 12.53 0.00 0.00 1.90
588 605 6.872585 ATCCTTTCTTTCCCAATGCATTAA 57.127 33.333 12.53 0.00 0.00 1.40
589 606 6.678568 TCCTTTCTTTCCCAATGCATTAAA 57.321 33.333 12.53 8.54 0.00 1.52
590 607 6.463360 TCCTTTCTTTCCCAATGCATTAAAC 58.537 36.000 12.53 0.00 0.00 2.01
591 608 6.042552 TCCTTTCTTTCCCAATGCATTAAACA 59.957 34.615 12.53 0.00 0.00 2.83
592 609 6.709846 CCTTTCTTTCCCAATGCATTAAACAA 59.290 34.615 12.53 0.97 0.00 2.83
593 610 7.095102 CCTTTCTTTCCCAATGCATTAAACAAG 60.095 37.037 12.53 11.96 0.00 3.16
594 611 6.662865 TCTTTCCCAATGCATTAAACAAGA 57.337 33.333 12.53 13.92 0.00 3.02
595 612 6.690530 TCTTTCCCAATGCATTAAACAAGAG 58.309 36.000 12.53 5.05 0.00 2.85
596 613 6.493115 TCTTTCCCAATGCATTAAACAAGAGA 59.507 34.615 12.53 7.22 0.00 3.10
597 614 6.855763 TTCCCAATGCATTAAACAAGAGAT 57.144 33.333 12.53 0.00 0.00 2.75
598 615 6.455360 TCCCAATGCATTAAACAAGAGATC 57.545 37.500 12.53 0.00 0.00 2.75
599 616 5.951148 TCCCAATGCATTAAACAAGAGATCA 59.049 36.000 12.53 0.00 0.00 2.92
600 617 6.095860 TCCCAATGCATTAAACAAGAGATCAG 59.904 38.462 12.53 0.00 0.00 2.90
601 618 6.095860 CCCAATGCATTAAACAAGAGATCAGA 59.904 38.462 12.53 0.00 0.00 3.27
602 619 7.363181 CCCAATGCATTAAACAAGAGATCAGAA 60.363 37.037 12.53 0.00 0.00 3.02
603 620 7.487189 CCAATGCATTAAACAAGAGATCAGAAC 59.513 37.037 12.53 0.00 0.00 3.01
604 621 7.692460 ATGCATTAAACAAGAGATCAGAACA 57.308 32.000 0.00 0.00 0.00 3.18
605 622 7.509141 TGCATTAAACAAGAGATCAGAACAA 57.491 32.000 0.00 0.00 0.00 2.83
606 623 8.114331 TGCATTAAACAAGAGATCAGAACAAT 57.886 30.769 0.00 0.00 0.00 2.71
607 624 8.239314 TGCATTAAACAAGAGATCAGAACAATC 58.761 33.333 0.00 0.00 0.00 2.67
608 625 8.239314 GCATTAAACAAGAGATCAGAACAATCA 58.761 33.333 0.00 0.00 0.00 2.57
640 657 9.807921 TTTTGATTGAAAGGGTACTTCTAATCT 57.192 29.630 13.12 0.00 38.46 2.40
641 658 9.449719 TTTGATTGAAAGGGTACTTCTAATCTC 57.550 33.333 13.12 0.00 38.46 2.75
642 659 7.565680 TGATTGAAAGGGTACTTCTAATCTCC 58.434 38.462 13.12 0.00 38.46 3.71
643 660 6.945636 TTGAAAGGGTACTTCTAATCTCCA 57.054 37.500 0.00 0.00 35.41 3.86
644 661 6.295719 TGAAAGGGTACTTCTAATCTCCAC 57.704 41.667 0.00 0.00 35.41 4.02
645 662 5.189145 TGAAAGGGTACTTCTAATCTCCACC 59.811 44.000 0.00 0.00 35.41 4.61
646 663 3.297736 AGGGTACTTCTAATCTCCACCG 58.702 50.000 0.00 0.00 0.00 4.94
647 664 3.029570 GGGTACTTCTAATCTCCACCGT 58.970 50.000 0.00 0.00 0.00 4.83
648 665 3.450096 GGGTACTTCTAATCTCCACCGTT 59.550 47.826 0.00 0.00 0.00 4.44
649 666 4.646492 GGGTACTTCTAATCTCCACCGTTA 59.354 45.833 0.00 0.00 0.00 3.18
650 667 5.127682 GGGTACTTCTAATCTCCACCGTTAA 59.872 44.000 0.00 0.00 0.00 2.01
651 668 6.183360 GGGTACTTCTAATCTCCACCGTTAAT 60.183 42.308 0.00 0.00 0.00 1.40
652 669 7.014615 GGGTACTTCTAATCTCCACCGTTAATA 59.985 40.741 0.00 0.00 0.00 0.98
653 670 8.583296 GGTACTTCTAATCTCCACCGTTAATAT 58.417 37.037 0.00 0.00 0.00 1.28
654 671 9.408069 GTACTTCTAATCTCCACCGTTAATATG 57.592 37.037 0.00 0.00 0.00 1.78
655 672 6.929606 ACTTCTAATCTCCACCGTTAATATGC 59.070 38.462 0.00 0.00 0.00 3.14
656 673 6.413783 TCTAATCTCCACCGTTAATATGCA 57.586 37.500 0.00 0.00 0.00 3.96
657 674 7.004555 TCTAATCTCCACCGTTAATATGCAT 57.995 36.000 3.79 3.79 0.00 3.96
658 675 7.097192 TCTAATCTCCACCGTTAATATGCATC 58.903 38.462 0.19 0.00 0.00 3.91
659 676 3.649073 TCTCCACCGTTAATATGCATCG 58.351 45.455 0.19 0.00 0.00 3.84
660 677 3.319689 TCTCCACCGTTAATATGCATCGA 59.680 43.478 0.19 0.00 0.00 3.59
661 678 4.055360 CTCCACCGTTAATATGCATCGAA 58.945 43.478 0.19 0.00 0.00 3.71
662 679 4.443621 TCCACCGTTAATATGCATCGAAA 58.556 39.130 0.19 0.00 0.00 3.46
663 680 5.060506 TCCACCGTTAATATGCATCGAAAT 58.939 37.500 0.19 0.00 0.00 2.17
664 681 6.224584 TCCACCGTTAATATGCATCGAAATA 58.775 36.000 0.19 0.00 0.00 1.40
665 682 6.876789 TCCACCGTTAATATGCATCGAAATAT 59.123 34.615 0.19 0.00 0.00 1.28
666 683 8.035984 TCCACCGTTAATATGCATCGAAATATA 58.964 33.333 0.19 0.00 0.00 0.86
667 684 8.826710 CCACCGTTAATATGCATCGAAATATAT 58.173 33.333 0.19 0.00 0.00 0.86
689 706 1.842699 ACTTTTCTAAGGGGGTGGGT 58.157 50.000 0.00 0.00 35.61 4.51
695 712 1.613035 TAAGGGGGTGGGTGTACCG 60.613 63.158 0.00 0.00 44.64 4.02
699 716 1.914764 GGGGTGGGTGTACCGAAGA 60.915 63.158 0.00 0.00 44.64 2.87
707 724 3.118334 TGGGTGTACCGAAGAAAAACTCA 60.118 43.478 0.00 0.00 44.64 3.41
708 725 4.070009 GGGTGTACCGAAGAAAAACTCAT 58.930 43.478 0.00 0.00 36.71 2.90
709 726 4.153655 GGGTGTACCGAAGAAAAACTCATC 59.846 45.833 0.00 0.00 36.71 2.92
716 881 7.133891 ACCGAAGAAAAACTCATCACTATTG 57.866 36.000 0.00 0.00 0.00 1.90
730 895 7.044181 TCATCACTATTGTTGTTCAGGAGATC 58.956 38.462 0.00 0.00 0.00 2.75
731 896 5.734720 TCACTATTGTTGTTCAGGAGATCC 58.265 41.667 0.00 0.00 0.00 3.36
732 897 5.248248 TCACTATTGTTGTTCAGGAGATCCA 59.752 40.000 0.92 0.00 38.89 3.41
733 898 5.939883 CACTATTGTTGTTCAGGAGATCCAA 59.060 40.000 0.92 0.00 38.89 3.53
734 899 5.940470 ACTATTGTTGTTCAGGAGATCCAAC 59.060 40.000 0.92 0.00 38.89 3.77
735 900 4.437682 TTGTTGTTCAGGAGATCCAACT 57.562 40.909 0.92 0.00 37.11 3.16
736 901 5.560722 TTGTTGTTCAGGAGATCCAACTA 57.439 39.130 0.92 1.27 37.11 2.24
737 902 5.762179 TGTTGTTCAGGAGATCCAACTAT 57.238 39.130 0.92 0.00 37.11 2.12
738 903 6.126863 TGTTGTTCAGGAGATCCAACTATT 57.873 37.500 0.92 0.00 37.11 1.73
739 904 5.939883 TGTTGTTCAGGAGATCCAACTATTG 59.060 40.000 0.92 0.00 37.11 1.90
740 905 6.173339 GTTGTTCAGGAGATCCAACTATTGA 58.827 40.000 0.92 0.00 38.89 2.57
741 906 5.982356 TGTTCAGGAGATCCAACTATTGAG 58.018 41.667 0.92 0.00 38.89 3.02
742 907 5.485353 TGTTCAGGAGATCCAACTATTGAGT 59.515 40.000 0.92 0.00 38.89 3.41
743 908 5.860941 TCAGGAGATCCAACTATTGAGTC 57.139 43.478 0.92 0.00 38.89 3.36
744 909 4.339530 TCAGGAGATCCAACTATTGAGTCG 59.660 45.833 0.92 0.00 38.89 4.18
745 910 4.339530 CAGGAGATCCAACTATTGAGTCGA 59.660 45.833 0.92 0.00 38.89 4.20
746 911 4.956700 AGGAGATCCAACTATTGAGTCGAA 59.043 41.667 0.92 0.00 38.89 3.71
747 912 5.600484 AGGAGATCCAACTATTGAGTCGAAT 59.400 40.000 0.92 0.00 38.89 3.34
748 913 5.694006 GGAGATCCAACTATTGAGTCGAATG 59.306 44.000 0.00 0.00 33.58 2.67
749 914 5.053145 AGATCCAACTATTGAGTCGAATGC 58.947 41.667 0.00 0.00 33.58 3.56
750 915 3.186909 TCCAACTATTGAGTCGAATGCG 58.813 45.455 0.00 0.00 33.58 4.73
751 916 2.285220 CCAACTATTGAGTCGAATGCGG 59.715 50.000 0.00 0.00 33.58 5.69
752 917 2.930040 CAACTATTGAGTCGAATGCGGT 59.070 45.455 0.00 0.00 33.58 5.68
753 918 2.540515 ACTATTGAGTCGAATGCGGTG 58.459 47.619 0.00 0.00 38.28 4.94
754 919 1.860950 CTATTGAGTCGAATGCGGTGG 59.139 52.381 0.00 0.00 38.28 4.61
755 920 0.249120 ATTGAGTCGAATGCGGTGGA 59.751 50.000 0.00 0.00 38.28 4.02
758 940 0.108804 GAGTCGAATGCGGTGGAGAA 60.109 55.000 0.00 0.00 38.28 2.87
767 949 0.466124 GCGGTGGAGAAAGAGGCTAT 59.534 55.000 0.00 0.00 0.00 2.97
770 952 2.119495 GGTGGAGAAAGAGGCTATGGA 58.881 52.381 0.00 0.00 0.00 3.41
771 953 2.708325 GGTGGAGAAAGAGGCTATGGAT 59.292 50.000 0.00 0.00 0.00 3.41
772 954 3.137360 GGTGGAGAAAGAGGCTATGGATT 59.863 47.826 0.00 0.00 0.00 3.01
773 955 4.385754 GGTGGAGAAAGAGGCTATGGATTT 60.386 45.833 0.00 0.00 0.00 2.17
774 956 4.578105 GTGGAGAAAGAGGCTATGGATTTG 59.422 45.833 0.00 0.00 0.00 2.32
775 957 4.140536 GGAGAAAGAGGCTATGGATTTGG 58.859 47.826 0.00 0.00 0.00 3.28
776 958 4.140536 GAGAAAGAGGCTATGGATTTGGG 58.859 47.826 0.00 0.00 0.00 4.12
777 959 3.788142 AGAAAGAGGCTATGGATTTGGGA 59.212 43.478 0.00 0.00 0.00 4.37
799 981 4.496336 GGGGCTGCGAGATGGCTT 62.496 66.667 0.00 0.00 0.00 4.35
800 982 3.207669 GGGCTGCGAGATGGCTTG 61.208 66.667 0.00 0.00 0.00 4.01
809 991 2.223433 GCGAGATGGCTTGAGAATTTGG 60.223 50.000 0.00 0.00 0.00 3.28
814 996 3.806949 TGGCTTGAGAATTTGGGTAGT 57.193 42.857 0.00 0.00 0.00 2.73
815 997 4.112634 TGGCTTGAGAATTTGGGTAGTT 57.887 40.909 0.00 0.00 0.00 2.24
819 1001 5.926542 GGCTTGAGAATTTGGGTAGTTTTTC 59.073 40.000 0.00 0.00 0.00 2.29
823 1005 9.249457 CTTGAGAATTTGGGTAGTTTTTCTTTC 57.751 33.333 0.00 0.00 0.00 2.62
853 1035 4.937201 AAGAGCCTTTTCATTTTCGGTT 57.063 36.364 0.00 0.00 0.00 4.44
857 1039 3.386402 AGCCTTTTCATTTTCGGTTTGGA 59.614 39.130 0.00 0.00 0.00 3.53
858 1040 3.493129 GCCTTTTCATTTTCGGTTTGGAC 59.507 43.478 0.00 0.00 0.00 4.02
863 1045 7.275560 CCTTTTCATTTTCGGTTTGGACATATC 59.724 37.037 0.00 0.00 0.00 1.63
866 1048 5.588648 TCATTTTCGGTTTGGACATATCTCC 59.411 40.000 0.00 0.00 0.00 3.71
880 1062 7.038302 TGGACATATCTCCTATTTGGTATGGAC 60.038 40.741 0.00 0.00 37.07 4.02
883 1065 9.615660 ACATATCTCCTATTTGGTATGGACTTA 57.384 33.333 0.00 0.00 37.07 2.24
889 1071 9.408648 CTCCTATTTGGTATGGACTTATTGTTT 57.591 33.333 0.00 0.00 37.07 2.83
932 1114 8.594687 CAAAACCAAACATTCTTAACAAGACAG 58.405 33.333 0.00 0.00 37.23 3.51
944 1126 3.475566 ACAAGACAGCTCAGCTACAAA 57.524 42.857 0.00 0.00 36.40 2.83
953 1135 2.618709 GCTCAGCTACAAACCAACAACT 59.381 45.455 0.00 0.00 0.00 3.16
956 1138 4.385825 TCAGCTACAAACCAACAACTAGG 58.614 43.478 0.00 0.00 0.00 3.02
977 1159 2.606587 AACCCCTTCTCGCTGCCAT 61.607 57.895 0.00 0.00 0.00 4.40
989 1171 1.105759 GCTGCCATTCTGACCCCATC 61.106 60.000 0.00 0.00 0.00 3.51
992 1174 1.105759 GCCATTCTGACCCCATCTGC 61.106 60.000 0.00 0.00 0.00 4.26
1004 1186 3.344703 CATCTGCTGGACAAACCCA 57.655 52.632 0.00 0.00 38.00 4.51
1016 1198 1.004277 ACAAACCCATACATCTGCGGT 59.996 47.619 0.00 0.00 0.00 5.68
1022 1204 2.037121 CCCATACATCTGCGGTCACATA 59.963 50.000 0.00 0.00 0.00 2.29
1023 1205 3.059884 CCATACATCTGCGGTCACATAC 58.940 50.000 0.00 0.00 0.00 2.39
1026 1208 2.826428 ACATCTGCGGTCACATACATC 58.174 47.619 0.00 0.00 0.00 3.06
1039 1221 4.805719 TCACATACATCTGCTTCATCGAAC 59.194 41.667 0.00 0.00 0.00 3.95
1200 1388 1.797025 GCAAGTAAGCTCTGGTTCGT 58.203 50.000 0.00 0.00 0.00 3.85
1228 1416 3.494561 TGGCCCTAACTTCCAGAGT 57.505 52.632 0.00 0.00 41.47 3.24
1250 1438 0.389391 CTACCGCGAGTTCCATGGAT 59.611 55.000 17.06 0.06 0.00 3.41
1289 1477 4.733887 GCTTCTTTTGCAATCAGATCGATG 59.266 41.667 0.54 0.00 33.40 3.84
1290 1478 4.888038 TCTTTTGCAATCAGATCGATGG 57.112 40.909 0.54 0.00 33.40 3.51
1299 1487 0.387202 CAGATCGATGGCTCCGACTT 59.613 55.000 0.54 0.00 38.97 3.01
1313 1504 1.267121 CGACTTGGAGGAGGAGGAAA 58.733 55.000 0.00 0.00 0.00 3.13
1318 1509 1.827792 TGGAGGAGGAGGAAAAACCA 58.172 50.000 0.00 0.00 42.04 3.67
1369 1560 2.502295 GGCTCTTGCATATCCAAGGAG 58.498 52.381 6.55 4.47 41.89 3.69
1382 1573 1.686428 CCAAGGAGGACTGGATCGAGA 60.686 57.143 12.14 0.00 41.22 4.04
1384 1575 0.626382 AGGAGGACTGGATCGAGACA 59.374 55.000 12.14 0.00 0.00 3.41
1387 1578 1.673920 GAGGACTGGATCGAGACAGAC 59.326 57.143 21.65 16.29 38.09 3.51
1430 1621 1.909700 TGGTCATGTTCTCTTTGGGC 58.090 50.000 0.00 0.00 0.00 5.36
1465 1656 0.109458 CCACGGAGTTCATCGTTCGA 60.109 55.000 0.00 0.00 41.61 3.71
1471 1662 1.389106 GAGTTCATCGTTCGAAACCCG 59.611 52.381 0.00 0.00 40.25 5.28
1518 1709 4.096382 GCACACACCTAAAAGATACATGGG 59.904 45.833 0.00 0.00 0.00 4.00
1540 1731 4.980805 GACAACCGTGGAGCCGCA 62.981 66.667 0.56 0.00 0.00 5.69
1619 1810 2.436417 TGGCCTTTGTCTGCTTGTATC 58.564 47.619 3.32 0.00 0.00 2.24
1626 1817 2.540383 TGTCTGCTTGTATCTGGGAGT 58.460 47.619 0.00 0.00 0.00 3.85
1636 1827 3.465403 CTGGGAGTGGGCGAGGAG 61.465 72.222 0.00 0.00 0.00 3.69
1647 1838 1.338579 GGGCGAGGAGGATGATGATTC 60.339 57.143 0.00 0.00 0.00 2.52
1649 1840 2.828520 GGCGAGGAGGATGATGATTCTA 59.171 50.000 0.00 0.00 0.00 2.10
1653 1844 5.568423 GCGAGGAGGATGATGATTCTATTGT 60.568 44.000 0.00 0.00 0.00 2.71
1676 1867 2.978010 CGGGTGTGTCCTTGCCAC 60.978 66.667 0.00 0.00 36.25 5.01
1697 1924 3.259876 ACAGATGTGCAATTGGAGCAATT 59.740 39.130 7.72 0.00 43.71 2.32
1754 1981 4.704833 GGAGCAAGCGGTGGAGCA 62.705 66.667 9.18 0.00 40.15 4.26
1789 2019 0.105862 ATGTTCCATCTGGGGCATGG 60.106 55.000 0.00 0.00 42.16 3.66
1799 2029 0.109153 TGGGGCATGGATCGATTCAG 59.891 55.000 12.88 5.74 0.00 3.02
1838 2072 5.246307 TCGAAGACTCACTCTACTTCATGA 58.754 41.667 0.00 0.00 38.71 3.07
1857 2100 9.569167 CTTCATGATTTCATATTATGATGGTGC 57.431 33.333 7.19 0.00 39.39 5.01
1868 2111 6.570672 ATTATGATGGTGCTTGCATAGAAG 57.429 37.500 0.00 0.00 0.00 2.85
1917 2160 3.117776 TGCTTATCACTGATTGATGGGCT 60.118 43.478 0.00 0.00 45.22 5.19
1950 2200 1.009829 GTCTTTGCCGATGCCACTAG 58.990 55.000 0.00 0.00 36.33 2.57
1957 2207 1.604185 GCCGATGCCACTAGACTCATC 60.604 57.143 0.00 4.93 33.79 2.92
1971 2221 0.531532 CTCATCGCCATGGAGGACAC 60.532 60.000 18.40 0.00 41.22 3.67
1974 2224 1.561769 ATCGCCATGGAGGACACCAA 61.562 55.000 18.40 0.00 43.47 3.67
2034 2285 5.014755 ACCTATGGTCAAGACAAATGGGTTA 59.985 40.000 13.68 0.00 37.43 2.85
2045 2296 5.944007 AGACAAATGGGTTACAATGGAGTAC 59.056 40.000 0.00 0.00 0.00 2.73
2080 2331 6.739112 TCAACGAATAGTCATCGATCTCAAT 58.261 36.000 0.00 0.00 42.76 2.57
2098 2349 2.019948 ATAACCTTCTTCCCGTTCGC 57.980 50.000 0.00 0.00 0.00 4.70
2168 2419 9.113838 GTGATATCATTTTTGTGACCATAGACT 57.886 33.333 9.02 0.00 0.00 3.24
2212 2463 3.964688 TCAAGTCACTAAGGTGGAAGACA 59.035 43.478 0.00 0.00 43.17 3.41
2216 2467 6.681729 AGTCACTAAGGTGGAAGACAATAA 57.318 37.500 0.00 0.00 43.17 1.40
2217 2468 6.465084 AGTCACTAAGGTGGAAGACAATAAC 58.535 40.000 0.00 0.00 43.17 1.89
2382 2682 7.830739 ACATTGAATGTCTAATCCCAACTTTC 58.169 34.615 4.72 0.00 39.92 2.62
2419 2825 7.101054 ACACTCGAAGGTTGCAACTAATTATA 58.899 34.615 27.64 11.23 0.00 0.98
2483 2897 5.365021 TTTTGGAATCACACCCACAAATT 57.635 34.783 0.00 0.00 31.11 1.82
2486 2906 3.963374 TGGAATCACACCCACAAATTCAA 59.037 39.130 0.00 0.00 0.00 2.69
2538 2958 8.308931 ACATTGACAATCTATGTTTGCAGAAAT 58.691 29.630 0.00 0.00 44.12 2.17
2545 2965 5.569355 TCTATGTTTGCAGAAATGGAGGAA 58.431 37.500 0.00 0.00 0.00 3.36
2547 2967 4.589216 TGTTTGCAGAAATGGAGGAAAG 57.411 40.909 0.00 0.00 0.00 2.62
2548 2968 3.321682 TGTTTGCAGAAATGGAGGAAAGG 59.678 43.478 0.00 0.00 0.00 3.11
2549 2969 1.549203 TGCAGAAATGGAGGAAAGGC 58.451 50.000 0.00 0.00 0.00 4.35
2550 2970 0.820226 GCAGAAATGGAGGAAAGGCC 59.180 55.000 0.00 0.00 0.00 5.19
2552 2972 2.097825 CAGAAATGGAGGAAAGGCCAG 58.902 52.381 5.01 0.00 40.02 4.85
2553 2973 0.820226 GAAATGGAGGAAAGGCCAGC 59.180 55.000 5.01 0.00 40.02 4.85
2566 3001 2.267006 CCAGCCACTCAGATGCGT 59.733 61.111 0.00 0.00 0.00 5.24
2571 3006 1.080995 GCCACTCAGATGCGTCTCAC 61.081 60.000 5.16 0.00 30.42 3.51
2572 3007 0.244721 CCACTCAGATGCGTCTCACA 59.755 55.000 5.16 0.00 30.42 3.58
2575 3010 2.098614 ACTCAGATGCGTCTCACAGAT 58.901 47.619 5.16 0.00 30.42 2.90
2578 3013 2.692041 TCAGATGCGTCTCACAGATGAT 59.308 45.455 5.16 0.00 33.07 2.45
2579 3014 2.795470 CAGATGCGTCTCACAGATGATG 59.205 50.000 5.16 0.00 33.07 3.07
2589 3024 4.777366 TCTCACAGATGATGTAGGGTTGAA 59.223 41.667 0.00 0.00 41.41 2.69
2595 3030 5.942236 CAGATGATGTAGGGTTGAATATGGG 59.058 44.000 0.00 0.00 0.00 4.00
2596 3031 4.722526 TGATGTAGGGTTGAATATGGGG 57.277 45.455 0.00 0.00 0.00 4.96
2597 3032 3.181434 TGATGTAGGGTTGAATATGGGGC 60.181 47.826 0.00 0.00 0.00 5.80
2598 3033 2.498441 TGTAGGGTTGAATATGGGGCT 58.502 47.619 0.00 0.00 0.00 5.19
2649 3123 5.106396 GGTCTTGTGATCAATTCTCTTGGTG 60.106 44.000 0.00 0.00 32.82 4.17
2664 3138 1.593196 TGGTGTTCAGTAGCTGTTGC 58.407 50.000 0.00 0.00 40.05 4.17
2666 3140 2.154462 GGTGTTCAGTAGCTGTTGCAT 58.846 47.619 0.00 0.00 42.74 3.96
2708 3197 5.705441 TCGTCTTGTTGCTTGATAATTTCCT 59.295 36.000 0.00 0.00 0.00 3.36
2716 3205 6.403866 TGCTTGATAATTTCCTTGTGTTGT 57.596 33.333 0.00 0.00 0.00 3.32
2724 3213 2.064434 TCCTTGTGTTGTTGGCATGA 57.936 45.000 0.00 0.00 0.00 3.07
2740 3229 2.688507 CATGAGTAAGCAGGTGAACGT 58.311 47.619 0.00 0.00 0.00 3.99
2741 3230 3.845178 CATGAGTAAGCAGGTGAACGTA 58.155 45.455 0.00 0.00 0.00 3.57
2742 3231 3.570926 TGAGTAAGCAGGTGAACGTAG 57.429 47.619 0.00 0.00 0.00 3.51
2748 3237 6.793349 AGTAAGCAGGTGAACGTAGTATTAG 58.207 40.000 0.00 0.00 45.00 1.73
2851 3490 4.213482 GCTTAGTTTTTGATGGTGACTCGT 59.787 41.667 0.00 0.00 0.00 4.18
2856 3495 5.299279 AGTTTTTGATGGTGACTCGTTCATT 59.701 36.000 0.00 0.00 36.32 2.57
2909 3548 5.793817 TGCATGTCAAGTACTGATGTTACT 58.206 37.500 0.00 0.00 36.14 2.24
2916 3555 5.696270 TCAAGTACTGATGTTACTGCAGTTG 59.304 40.000 27.06 12.21 42.40 3.16
2939 3580 9.490663 GTTGTATTAGAACTACATGATGTTTGC 57.509 33.333 2.29 0.00 0.00 3.68
2949 3590 5.411831 ACATGATGTTTGCTCAGAGAGTA 57.588 39.130 0.00 0.00 31.39 2.59
2950 3591 5.987098 ACATGATGTTTGCTCAGAGAGTAT 58.013 37.500 0.00 0.00 31.39 2.12
2994 3635 4.497291 ACAACCAACCTCTGTTTCACTA 57.503 40.909 0.00 0.00 30.42 2.74
3010 3654 5.620738 TTCACTAATGCTTCTCATAGGCT 57.379 39.130 0.00 0.00 34.33 4.58
3018 3662 2.502295 CTTCTCATAGGCTTGGGCATC 58.498 52.381 0.00 0.00 40.87 3.91
3019 3663 1.510492 TCTCATAGGCTTGGGCATCA 58.490 50.000 0.00 0.00 40.87 3.07
3021 3665 2.444388 TCTCATAGGCTTGGGCATCAAT 59.556 45.455 0.00 0.00 40.87 2.57
3022 3666 2.557056 CTCATAGGCTTGGGCATCAATG 59.443 50.000 0.00 0.00 40.87 2.82
3025 3669 1.188863 AGGCTTGGGCATCAATGTTC 58.811 50.000 0.00 0.00 40.87 3.18
3038 3682 6.532657 GGCATCAATGTTCTATTTTTCACCTG 59.467 38.462 0.00 0.00 0.00 4.00
3041 3685 8.739039 CATCAATGTTCTATTTTTCACCTGGTA 58.261 33.333 0.00 0.00 0.00 3.25
3042 3686 8.877864 TCAATGTTCTATTTTTCACCTGGTAT 57.122 30.769 0.00 0.00 0.00 2.73
3067 3711 9.801873 ATTATTCTGTAAAATTTCCATCCAACG 57.198 29.630 0.00 0.00 0.00 4.10
3068 3712 5.637006 TCTGTAAAATTTCCATCCAACGG 57.363 39.130 0.00 0.00 0.00 4.44
3069 3713 5.074115 TCTGTAAAATTTCCATCCAACGGT 58.926 37.500 0.00 0.00 0.00 4.83
3070 3714 5.182380 TCTGTAAAATTTCCATCCAACGGTC 59.818 40.000 0.00 0.00 0.00 4.79
3072 3716 2.595750 AATTTCCATCCAACGGTCCA 57.404 45.000 0.00 0.00 0.00 4.02
3073 3717 2.826674 ATTTCCATCCAACGGTCCAT 57.173 45.000 0.00 0.00 0.00 3.41
3074 3718 3.943671 ATTTCCATCCAACGGTCCATA 57.056 42.857 0.00 0.00 0.00 2.74
3075 3719 3.943671 TTTCCATCCAACGGTCCATAT 57.056 42.857 0.00 0.00 0.00 1.78
3076 3720 3.485463 TTCCATCCAACGGTCCATATC 57.515 47.619 0.00 0.00 0.00 1.63
3077 3721 2.403561 TCCATCCAACGGTCCATATCA 58.596 47.619 0.00 0.00 0.00 2.15
3081 3725 4.566278 CCATCCAACGGTCCATATCATGAT 60.566 45.833 13.81 13.81 0.00 2.45
3083 3727 4.641396 TCCAACGGTCCATATCATGATTC 58.359 43.478 14.65 0.38 0.00 2.52
3084 3728 4.102367 TCCAACGGTCCATATCATGATTCA 59.898 41.667 14.65 0.00 0.00 2.57
3087 3869 4.635223 ACGGTCCATATCATGATTCAGTG 58.365 43.478 14.65 8.09 0.00 3.66
3100 3882 3.745975 TGATTCAGTGAAATGTCGTGTCC 59.254 43.478 10.14 0.00 0.00 4.02
3102 3884 2.479837 TCAGTGAAATGTCGTGTCCAC 58.520 47.619 0.00 0.00 0.00 4.02
3121 3903 1.601903 ACATGCCGTGTTGTTGTACTG 59.398 47.619 0.00 0.00 38.01 2.74
3142 3924 1.308998 CTTGTTTCTCCACGCCTTGT 58.691 50.000 0.00 0.00 0.00 3.16
3152 3934 7.548196 TTCTCCACGCCTTGTATTTTATAAG 57.452 36.000 0.00 0.00 0.00 1.73
3190 3972 1.957177 AGTTCTCTCAACTCACTGCGA 59.043 47.619 0.00 0.00 0.00 5.10
3213 3995 0.390866 ACTGCGTCCATCAGCTCTTG 60.391 55.000 0.00 0.00 35.04 3.02
3238 4021 5.365619 AGCTTTCCGAGTTTCAGAACTTTA 58.634 37.500 0.00 0.00 45.88 1.85
3262 4045 2.870372 GCCTAGGCAGCGTGTTTG 59.130 61.111 29.33 0.00 41.49 2.93
3294 4077 9.226606 TGTATTTTTCACCCTAGTATTGTTCTG 57.773 33.333 0.00 0.00 0.00 3.02
3302 4085 8.434392 TCACCCTAGTATTGTTCTGTAAAAACT 58.566 33.333 0.00 0.00 0.00 2.66
3303 4086 8.718734 CACCCTAGTATTGTTCTGTAAAAACTC 58.281 37.037 0.00 0.00 0.00 3.01
3304 4087 7.881751 ACCCTAGTATTGTTCTGTAAAAACTCC 59.118 37.037 0.00 0.00 0.00 3.85
3305 4088 7.881232 CCCTAGTATTGTTCTGTAAAAACTCCA 59.119 37.037 0.00 0.00 0.00 3.86
3306 4089 9.449719 CCTAGTATTGTTCTGTAAAAACTCCAT 57.550 33.333 0.00 0.00 0.00 3.41
3308 4091 8.336801 AGTATTGTTCTGTAAAAACTCCATCC 57.663 34.615 0.00 0.00 0.00 3.51
3309 4092 7.942341 AGTATTGTTCTGTAAAAACTCCATCCA 59.058 33.333 0.00 0.00 0.00 3.41
3314 4098 5.450453 TCTGTAAAAACTCCATCCAAACCA 58.550 37.500 0.00 0.00 0.00 3.67
3336 4120 6.122277 CCACATCATGGTTATCAGGTAACTT 58.878 40.000 3.53 0.00 45.45 2.66
3337 4121 6.603201 CCACATCATGGTTATCAGGTAACTTT 59.397 38.462 3.53 0.00 45.45 2.66
3338 4122 7.122650 CCACATCATGGTTATCAGGTAACTTTT 59.877 37.037 3.53 0.00 45.45 2.27
3361 4145 4.586306 TTTAGAAAAGGAGGATGACCCC 57.414 45.455 0.00 0.00 36.73 4.95
3362 4146 1.299939 AGAAAAGGAGGATGACCCCC 58.700 55.000 0.00 0.00 36.73 5.40
3363 4147 0.107165 GAAAAGGAGGATGACCCCCG 60.107 60.000 0.00 0.00 36.73 5.73
3364 4148 1.571773 AAAAGGAGGATGACCCCCGG 61.572 60.000 0.00 0.00 36.73 5.73
3370 4154 3.866582 GATGACCCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
3376 4160 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
3377 4161 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
3378 4162 4.559063 CCGGCCTCTGCATCTGGG 62.559 72.222 0.00 0.00 40.13 4.45
3381 4165 4.166888 GCCTCTGCATCTGGGCGA 62.167 66.667 0.00 0.00 37.47 5.54
3382 4166 2.827423 CCTCTGCATCTGGGCGAT 59.173 61.111 0.00 0.00 36.28 4.58
3389 4173 2.156542 CATCTGGGCGATGCATACG 58.843 57.895 0.00 6.68 42.75 3.06
3390 4174 1.004560 ATCTGGGCGATGCATACGG 60.005 57.895 16.56 6.65 0.00 4.02
3395 4179 2.588877 GCGATGCATACGGCCACT 60.589 61.111 16.56 0.00 43.89 4.00
3396 4180 2.180204 GCGATGCATACGGCCACTT 61.180 57.895 16.56 0.00 43.89 3.16
3397 4181 1.714899 GCGATGCATACGGCCACTTT 61.715 55.000 16.56 0.00 43.89 2.66
3398 4182 1.577468 CGATGCATACGGCCACTTTA 58.423 50.000 2.24 0.00 43.89 1.85
3399 4183 2.143122 CGATGCATACGGCCACTTTAT 58.857 47.619 2.24 0.00 43.89 1.40
3400 4184 2.548057 CGATGCATACGGCCACTTTATT 59.452 45.455 2.24 0.00 43.89 1.40
3401 4185 3.743911 CGATGCATACGGCCACTTTATTA 59.256 43.478 2.24 0.00 43.89 0.98
3402 4186 4.212425 CGATGCATACGGCCACTTTATTAA 59.788 41.667 2.24 0.00 43.89 1.40
3403 4187 5.106712 CGATGCATACGGCCACTTTATTAAT 60.107 40.000 2.24 0.00 43.89 1.40
3404 4188 6.567701 CGATGCATACGGCCACTTTATTAATT 60.568 38.462 2.24 0.00 43.89 1.40
3405 4189 7.360522 CGATGCATACGGCCACTTTATTAATTA 60.361 37.037 2.24 0.00 43.89 1.40
3406 4190 7.753309 TGCATACGGCCACTTTATTAATTAT 57.247 32.000 2.24 0.00 43.89 1.28
3407 4191 8.172352 TGCATACGGCCACTTTATTAATTATT 57.828 30.769 2.24 0.00 43.89 1.40
3408 4192 8.293867 TGCATACGGCCACTTTATTAATTATTC 58.706 33.333 2.24 0.00 43.89 1.75
3409 4193 8.512138 GCATACGGCCACTTTATTAATTATTCT 58.488 33.333 2.24 0.00 36.11 2.40
3411 4195 9.787435 ATACGGCCACTTTATTAATTATTCTCA 57.213 29.630 2.24 0.00 0.00 3.27
3412 4196 7.927048 ACGGCCACTTTATTAATTATTCTCAC 58.073 34.615 2.24 0.00 0.00 3.51
3413 4197 7.554835 ACGGCCACTTTATTAATTATTCTCACA 59.445 33.333 2.24 0.00 0.00 3.58
3414 4198 8.402472 CGGCCACTTTATTAATTATTCTCACAA 58.598 33.333 2.24 0.00 0.00 3.33
3415 4199 9.736023 GGCCACTTTATTAATTATTCTCACAAG 57.264 33.333 0.00 0.00 0.00 3.16
3501 4295 8.574251 AAATATTTTGTGCCTCACATACTACA 57.426 30.769 0.11 0.00 44.16 2.74
3575 4371 0.822811 TTTTGTTTGCAGCTGGAGCA 59.177 45.000 17.12 12.84 45.16 4.26
3756 4552 6.295575 CCATATGGTTGGCTTTTAGTTTCCAA 60.296 38.462 14.09 0.00 36.35 3.53
3791 4587 2.121291 TGGCAAATCATCGCTGGTTA 57.879 45.000 0.00 0.00 0.00 2.85
3909 4707 0.110867 TTCGAACGATTGCAAGTGCG 60.111 50.000 11.93 11.93 45.83 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.036105 CAGTGTACTGGGATGCTGCA 60.036 55.000 4.13 4.13 40.20 4.41
1 2 1.372087 GCAGTGTACTGGGATGCTGC 61.372 60.000 13.41 0.00 43.94 5.25
4 5 0.745845 CTGGCAGTGTACTGGGATGC 60.746 60.000 13.41 0.00 43.94 3.91
11 12 3.377656 CCGGACTGGCAGTGTACT 58.622 61.111 27.45 0.00 0.00 2.73
40 42 2.656069 GGCTAGGCGGAAGTGACCA 61.656 63.158 0.00 0.00 0.00 4.02
41 43 2.187163 GGCTAGGCGGAAGTGACC 59.813 66.667 0.00 0.00 0.00 4.02
48 50 1.735376 GATTGACGAGGCTAGGCGGA 61.735 60.000 11.10 0.00 0.00 5.54
64 66 7.285566 ACACTAATCAATGCTACAGATGGATT 58.714 34.615 0.00 0.00 0.00 3.01
65 67 6.835174 ACACTAATCAATGCTACAGATGGAT 58.165 36.000 0.00 0.00 0.00 3.41
73 75 7.128331 CAGCATACAACACTAATCAATGCTAC 58.872 38.462 6.59 0.00 44.88 3.58
86 88 4.552166 AACAACAGACAGCATACAACAC 57.448 40.909 0.00 0.00 0.00 3.32
96 98 8.909708 TCAAGTTAAAATCAAACAACAGACAG 57.090 30.769 0.00 0.00 0.00 3.51
114 116 5.645929 ACCAACACGCATGATATTCAAGTTA 59.354 36.000 0.00 0.00 0.00 2.24
119 121 6.691754 ATAAACCAACACGCATGATATTCA 57.308 33.333 0.00 0.00 0.00 2.57
120 122 7.376866 CAGAATAAACCAACACGCATGATATTC 59.623 37.037 0.00 0.00 0.00 1.75
121 123 7.148086 ACAGAATAAACCAACACGCATGATATT 60.148 33.333 0.00 0.00 0.00 1.28
122 124 6.318648 ACAGAATAAACCAACACGCATGATAT 59.681 34.615 0.00 0.00 0.00 1.63
123 125 5.645929 ACAGAATAAACCAACACGCATGATA 59.354 36.000 0.00 0.00 0.00 2.15
124 126 4.458989 ACAGAATAAACCAACACGCATGAT 59.541 37.500 0.00 0.00 0.00 2.45
125 127 3.818210 ACAGAATAAACCAACACGCATGA 59.182 39.130 0.00 0.00 0.00 3.07
127 129 3.818210 TGACAGAATAAACCAACACGCAT 59.182 39.130 0.00 0.00 0.00 4.73
202 205 9.567776 TTTACTACAACTGAATCTCATTTGGAA 57.432 29.630 10.36 0.24 40.14 3.53
231 234 4.713553 TCTGCTGAATAAACCAGACACAA 58.286 39.130 0.00 0.00 33.65 3.33
233 236 5.181748 AGATCTGCTGAATAAACCAGACAC 58.818 41.667 0.00 0.00 37.18 3.67
248 251 8.680903 CATTTTCTTGTAACCAATAGATCTGCT 58.319 33.333 5.18 0.00 0.00 4.24
254 257 7.336931 GCCTCTCATTTTCTTGTAACCAATAGA 59.663 37.037 0.00 0.00 0.00 1.98
258 261 4.215399 CGCCTCTCATTTTCTTGTAACCAA 59.785 41.667 0.00 0.00 0.00 3.67
259 262 3.751175 CGCCTCTCATTTTCTTGTAACCA 59.249 43.478 0.00 0.00 0.00 3.67
280 283 8.868744 TTTGCTTTTTCGATACTTTATACACG 57.131 30.769 0.00 0.00 0.00 4.49
369 375 6.798476 TGTCTTAGAACAATACTCGTAACACG 59.202 38.462 0.00 0.00 44.19 4.49
370 376 8.684973 ATGTCTTAGAACAATACTCGTAACAC 57.315 34.615 0.00 0.00 31.81 3.32
376 382 9.694520 CATCAAAATGTCTTAGAACAATACTCG 57.305 33.333 0.00 0.00 31.81 4.18
467 473 9.535878 TTTACTAAAGCAAAACCCAAATAGTTG 57.464 29.630 0.00 0.00 34.25 3.16
492 498 3.388350 TCGTGCAAATTTTTAAGGGGGTT 59.612 39.130 0.00 0.00 0.00 4.11
493 499 2.966516 TCGTGCAAATTTTTAAGGGGGT 59.033 40.909 0.00 0.00 0.00 4.95
502 508 9.744468 AGTAACTTTAAGATTCGTGCAAATTTT 57.256 25.926 0.00 0.00 0.00 1.82
503 509 9.744468 AAGTAACTTTAAGATTCGTGCAAATTT 57.256 25.926 0.00 0.00 0.00 1.82
552 565 9.020731 GGGAAAGAAAGGATTACAATTAGTTGA 57.979 33.333 4.81 0.00 38.71 3.18
553 566 8.802267 TGGGAAAGAAAGGATTACAATTAGTTG 58.198 33.333 0.00 0.00 41.20 3.16
554 567 8.950007 TGGGAAAGAAAGGATTACAATTAGTT 57.050 30.769 0.00 0.00 0.00 2.24
555 568 8.950007 TTGGGAAAGAAAGGATTACAATTAGT 57.050 30.769 0.00 0.00 0.00 2.24
556 569 9.807649 CATTGGGAAAGAAAGGATTACAATTAG 57.192 33.333 0.00 0.00 0.00 1.73
557 570 8.257306 GCATTGGGAAAGAAAGGATTACAATTA 58.743 33.333 0.00 0.00 0.00 1.40
560 577 5.541868 TGCATTGGGAAAGAAAGGATTACAA 59.458 36.000 0.00 0.00 0.00 2.41
566 583 6.042552 TGTTTAATGCATTGGGAAAGAAAGGA 59.957 34.615 22.27 0.16 0.00 3.36
568 585 7.656948 TCTTGTTTAATGCATTGGGAAAGAAAG 59.343 33.333 22.27 17.55 0.00 2.62
572 589 6.690530 TCTCTTGTTTAATGCATTGGGAAAG 58.309 36.000 22.27 17.94 0.00 2.62
576 593 6.095860 TCTGATCTCTTGTTTAATGCATTGGG 59.904 38.462 22.27 3.92 0.00 4.12
577 594 7.092137 TCTGATCTCTTGTTTAATGCATTGG 57.908 36.000 22.27 5.33 0.00 3.16
578 595 8.024865 TGTTCTGATCTCTTGTTTAATGCATTG 58.975 33.333 22.27 4.00 0.00 2.82
579 596 8.114331 TGTTCTGATCTCTTGTTTAATGCATT 57.886 30.769 17.56 17.56 0.00 3.56
580 597 7.692460 TGTTCTGATCTCTTGTTTAATGCAT 57.308 32.000 0.00 0.00 0.00 3.96
581 598 7.509141 TTGTTCTGATCTCTTGTTTAATGCA 57.491 32.000 0.00 0.00 0.00 3.96
614 631 9.807921 AGATTAGAAGTACCCTTTCAATCAAAA 57.192 29.630 14.01 0.00 35.59 2.44
615 632 9.449719 GAGATTAGAAGTACCCTTTCAATCAAA 57.550 33.333 14.01 0.00 35.59 2.69
616 633 8.047310 GGAGATTAGAAGTACCCTTTCAATCAA 58.953 37.037 14.01 0.70 35.59 2.57
617 634 7.182026 TGGAGATTAGAAGTACCCTTTCAATCA 59.818 37.037 14.01 0.00 35.59 2.57
618 635 7.496263 GTGGAGATTAGAAGTACCCTTTCAATC 59.504 40.741 0.00 1.08 34.53 2.67
619 636 7.339482 GTGGAGATTAGAAGTACCCTTTCAAT 58.661 38.462 0.00 0.00 0.00 2.57
620 637 6.296259 GGTGGAGATTAGAAGTACCCTTTCAA 60.296 42.308 0.00 0.00 0.00 2.69
621 638 5.189145 GGTGGAGATTAGAAGTACCCTTTCA 59.811 44.000 0.00 0.00 0.00 2.69
622 639 5.672503 GGTGGAGATTAGAAGTACCCTTTC 58.327 45.833 0.00 0.00 0.00 2.62
623 640 4.161754 CGGTGGAGATTAGAAGTACCCTTT 59.838 45.833 0.00 0.00 0.00 3.11
624 641 3.705072 CGGTGGAGATTAGAAGTACCCTT 59.295 47.826 0.00 0.00 0.00 3.95
625 642 3.297736 CGGTGGAGATTAGAAGTACCCT 58.702 50.000 0.00 0.00 0.00 4.34
626 643 3.029570 ACGGTGGAGATTAGAAGTACCC 58.970 50.000 0.00 0.00 0.00 3.69
627 644 4.732672 AACGGTGGAGATTAGAAGTACC 57.267 45.455 0.00 0.00 0.00 3.34
628 645 9.408069 CATATTAACGGTGGAGATTAGAAGTAC 57.592 37.037 0.00 0.00 0.00 2.73
629 646 8.086522 GCATATTAACGGTGGAGATTAGAAGTA 58.913 37.037 0.00 0.00 0.00 2.24
630 647 6.929606 GCATATTAACGGTGGAGATTAGAAGT 59.070 38.462 0.00 0.00 0.00 3.01
631 648 6.929049 TGCATATTAACGGTGGAGATTAGAAG 59.071 38.462 0.00 0.00 0.00 2.85
632 649 6.822442 TGCATATTAACGGTGGAGATTAGAA 58.178 36.000 0.00 0.00 0.00 2.10
633 650 6.413783 TGCATATTAACGGTGGAGATTAGA 57.586 37.500 0.00 0.00 0.00 2.10
634 651 6.035005 CGATGCATATTAACGGTGGAGATTAG 59.965 42.308 0.00 0.00 0.00 1.73
635 652 5.867174 CGATGCATATTAACGGTGGAGATTA 59.133 40.000 0.00 0.00 0.00 1.75
636 653 4.690748 CGATGCATATTAACGGTGGAGATT 59.309 41.667 0.00 0.00 0.00 2.40
637 654 4.021456 TCGATGCATATTAACGGTGGAGAT 60.021 41.667 0.00 0.00 0.00 2.75
638 655 3.319689 TCGATGCATATTAACGGTGGAGA 59.680 43.478 0.00 0.00 0.00 3.71
639 656 3.649073 TCGATGCATATTAACGGTGGAG 58.351 45.455 0.00 0.00 0.00 3.86
640 657 3.737032 TCGATGCATATTAACGGTGGA 57.263 42.857 0.00 0.00 0.00 4.02
641 658 4.804608 TTTCGATGCATATTAACGGTGG 57.195 40.909 0.00 0.00 0.00 4.61
661 678 9.877222 CCACCCCCTTAGAAAAGTTTATATATT 57.123 33.333 0.00 0.00 0.00 1.28
662 679 8.453681 CCCACCCCCTTAGAAAAGTTTATATAT 58.546 37.037 0.00 0.00 0.00 0.86
663 680 7.409694 ACCCACCCCCTTAGAAAAGTTTATATA 59.590 37.037 0.00 0.00 0.00 0.86
664 681 6.221029 ACCCACCCCCTTAGAAAAGTTTATAT 59.779 38.462 0.00 0.00 0.00 0.86
665 682 5.556739 ACCCACCCCCTTAGAAAAGTTTATA 59.443 40.000 0.00 0.00 0.00 0.98
666 683 4.358918 ACCCACCCCCTTAGAAAAGTTTAT 59.641 41.667 0.00 0.00 0.00 1.40
667 684 3.728456 ACCCACCCCCTTAGAAAAGTTTA 59.272 43.478 0.00 0.00 0.00 2.01
668 685 2.520980 ACCCACCCCCTTAGAAAAGTTT 59.479 45.455 0.00 0.00 0.00 2.66
669 686 2.149556 ACCCACCCCCTTAGAAAAGTT 58.850 47.619 0.00 0.00 0.00 2.66
670 687 1.427753 CACCCACCCCCTTAGAAAAGT 59.572 52.381 0.00 0.00 0.00 2.66
671 688 1.427753 ACACCCACCCCCTTAGAAAAG 59.572 52.381 0.00 0.00 0.00 2.27
672 689 1.536644 ACACCCACCCCCTTAGAAAA 58.463 50.000 0.00 0.00 0.00 2.29
673 690 1.987368 GTACACCCACCCCCTTAGAAA 59.013 52.381 0.00 0.00 0.00 2.52
674 691 1.660242 GTACACCCACCCCCTTAGAA 58.340 55.000 0.00 0.00 0.00 2.10
675 692 0.252835 GGTACACCCACCCCCTTAGA 60.253 60.000 0.00 0.00 31.91 2.10
676 693 1.619807 CGGTACACCCACCCCCTTAG 61.620 65.000 0.00 0.00 34.90 2.18
677 694 1.613035 CGGTACACCCACCCCCTTA 60.613 63.158 0.00 0.00 34.90 2.69
678 695 2.931649 CGGTACACCCACCCCCTT 60.932 66.667 0.00 0.00 34.90 3.95
679 696 3.487603 TTCGGTACACCCACCCCCT 62.488 63.158 0.00 0.00 34.90 4.79
680 697 2.929477 TTCGGTACACCCACCCCC 60.929 66.667 0.00 0.00 34.90 5.40
681 698 1.482748 TTCTTCGGTACACCCACCCC 61.483 60.000 0.00 0.00 34.90 4.95
682 699 0.397564 TTTCTTCGGTACACCCACCC 59.602 55.000 0.00 0.00 34.90 4.61
683 700 2.259266 TTTTCTTCGGTACACCCACC 57.741 50.000 0.00 0.00 35.04 4.61
684 701 3.208594 AGTTTTTCTTCGGTACACCCAC 58.791 45.455 0.00 0.00 0.00 4.61
685 702 3.118334 TGAGTTTTTCTTCGGTACACCCA 60.118 43.478 0.00 0.00 0.00 4.51
689 706 5.607477 AGTGATGAGTTTTTCTTCGGTACA 58.393 37.500 0.00 0.00 33.75 2.90
695 712 9.736023 AACAACAATAGTGATGAGTTTTTCTTC 57.264 29.630 7.47 0.00 32.15 2.87
699 716 8.137437 CCTGAACAACAATAGTGATGAGTTTTT 58.863 33.333 7.47 0.00 32.15 1.94
707 724 6.070021 TGGATCTCCTGAACAACAATAGTGAT 60.070 38.462 0.00 0.00 36.82 3.06
708 725 5.248248 TGGATCTCCTGAACAACAATAGTGA 59.752 40.000 0.00 0.00 36.82 3.41
709 726 5.491070 TGGATCTCCTGAACAACAATAGTG 58.509 41.667 0.00 0.00 36.82 2.74
716 881 6.173339 TCAATAGTTGGATCTCCTGAACAAC 58.827 40.000 0.00 0.00 40.87 3.32
730 895 2.285220 CCGCATTCGACTCAATAGTTGG 59.715 50.000 0.00 0.00 37.66 3.77
731 896 2.930040 ACCGCATTCGACTCAATAGTTG 59.070 45.455 0.00 0.00 38.34 3.16
732 897 2.930040 CACCGCATTCGACTCAATAGTT 59.070 45.455 0.00 0.00 35.56 2.24
733 898 2.540515 CACCGCATTCGACTCAATAGT 58.459 47.619 0.00 0.00 39.21 2.12
734 899 1.860950 CCACCGCATTCGACTCAATAG 59.139 52.381 0.00 0.00 38.10 1.73
735 900 1.478916 TCCACCGCATTCGACTCAATA 59.521 47.619 0.00 0.00 38.10 1.90
736 901 0.249120 TCCACCGCATTCGACTCAAT 59.751 50.000 0.00 0.00 38.10 2.57
737 902 0.389817 CTCCACCGCATTCGACTCAA 60.390 55.000 0.00 0.00 38.10 3.02
738 903 1.215382 CTCCACCGCATTCGACTCA 59.785 57.895 0.00 0.00 38.10 3.41
739 904 0.108804 TTCTCCACCGCATTCGACTC 60.109 55.000 0.00 0.00 38.10 3.36
740 905 0.320374 TTTCTCCACCGCATTCGACT 59.680 50.000 0.00 0.00 38.10 4.18
741 906 0.721718 CTTTCTCCACCGCATTCGAC 59.278 55.000 0.00 0.00 38.10 4.20
742 907 0.606096 TCTTTCTCCACCGCATTCGA 59.394 50.000 0.00 0.00 38.10 3.71
743 908 1.002366 CTCTTTCTCCACCGCATTCG 58.998 55.000 0.00 0.00 0.00 3.34
744 909 1.373570 CCTCTTTCTCCACCGCATTC 58.626 55.000 0.00 0.00 0.00 2.67
745 910 0.678048 GCCTCTTTCTCCACCGCATT 60.678 55.000 0.00 0.00 0.00 3.56
746 911 1.078143 GCCTCTTTCTCCACCGCAT 60.078 57.895 0.00 0.00 0.00 4.73
747 912 0.902984 TAGCCTCTTTCTCCACCGCA 60.903 55.000 0.00 0.00 0.00 5.69
748 913 0.466124 ATAGCCTCTTTCTCCACCGC 59.534 55.000 0.00 0.00 0.00 5.68
749 914 1.202580 CCATAGCCTCTTTCTCCACCG 60.203 57.143 0.00 0.00 0.00 4.94
750 915 2.119495 TCCATAGCCTCTTTCTCCACC 58.881 52.381 0.00 0.00 0.00 4.61
751 916 4.429854 AATCCATAGCCTCTTTCTCCAC 57.570 45.455 0.00 0.00 0.00 4.02
752 917 4.385643 CCAAATCCATAGCCTCTTTCTCCA 60.386 45.833 0.00 0.00 0.00 3.86
753 918 4.140536 CCAAATCCATAGCCTCTTTCTCC 58.859 47.826 0.00 0.00 0.00 3.71
754 919 4.140536 CCCAAATCCATAGCCTCTTTCTC 58.859 47.826 0.00 0.00 0.00 2.87
755 920 3.788142 TCCCAAATCCATAGCCTCTTTCT 59.212 43.478 0.00 0.00 0.00 2.52
758 940 4.821532 ATTCCCAAATCCATAGCCTCTT 57.178 40.909 0.00 0.00 0.00 2.85
767 949 1.203415 AGCCCCAAATTCCCAAATCCA 60.203 47.619 0.00 0.00 0.00 3.41
770 952 0.620030 GCAGCCCCAAATTCCCAAAT 59.380 50.000 0.00 0.00 0.00 2.32
771 953 1.825281 CGCAGCCCCAAATTCCCAAA 61.825 55.000 0.00 0.00 0.00 3.28
772 954 2.282039 CGCAGCCCCAAATTCCCAA 61.282 57.895 0.00 0.00 0.00 4.12
773 955 2.679642 CGCAGCCCCAAATTCCCA 60.680 61.111 0.00 0.00 0.00 4.37
774 956 2.362375 TCGCAGCCCCAAATTCCC 60.362 61.111 0.00 0.00 0.00 3.97
775 957 0.753111 ATCTCGCAGCCCCAAATTCC 60.753 55.000 0.00 0.00 0.00 3.01
776 958 0.383231 CATCTCGCAGCCCCAAATTC 59.617 55.000 0.00 0.00 0.00 2.17
777 959 1.039233 CCATCTCGCAGCCCCAAATT 61.039 55.000 0.00 0.00 0.00 1.82
799 981 8.533569 AGAAAGAAAAACTACCCAAATTCTCA 57.466 30.769 0.00 0.00 0.00 3.27
800 982 9.817809 AAAGAAAGAAAAACTACCCAAATTCTC 57.182 29.630 0.00 0.00 0.00 2.87
831 1013 4.937201 ACCGAAAATGAAAAGGCTCTTT 57.063 36.364 0.00 0.00 0.00 2.52
849 1031 5.470098 CCAAATAGGAGATATGTCCAAACCG 59.530 44.000 20.34 6.24 41.22 4.44
850 1032 6.365520 ACCAAATAGGAGATATGTCCAAACC 58.634 40.000 20.34 0.00 41.22 3.27
851 1033 9.003658 CATACCAAATAGGAGATATGTCCAAAC 57.996 37.037 20.34 0.00 41.22 2.93
853 1035 7.515861 TCCATACCAAATAGGAGATATGTCCAA 59.484 37.037 20.34 0.00 41.22 3.53
857 1039 8.511748 AAGTCCATACCAAATAGGAGATATGT 57.488 34.615 0.00 0.00 41.22 2.29
863 1045 8.980481 AACAATAAGTCCATACCAAATAGGAG 57.020 34.615 0.00 0.00 41.22 3.69
904 1086 8.931775 GTCTTGTTAAGAATGTTTGGTTTTGTT 58.068 29.630 0.00 0.00 39.67 2.83
912 1094 6.728200 TGAGCTGTCTTGTTAAGAATGTTTG 58.272 36.000 0.00 0.00 39.67 2.93
925 1107 2.481952 GGTTTGTAGCTGAGCTGTCTTG 59.518 50.000 18.79 0.00 40.10 3.02
932 1114 2.618709 AGTTGTTGGTTTGTAGCTGAGC 59.381 45.455 0.00 0.00 0.00 4.26
944 1126 0.178973 GGGTTGCCCTAGTTGTTGGT 60.179 55.000 0.00 0.00 41.34 3.67
953 1135 2.666098 GCGAGAAGGGGTTGCCCTA 61.666 63.158 4.02 0.00 44.66 3.53
956 1138 2.747855 CAGCGAGAAGGGGTTGCC 60.748 66.667 0.00 0.00 0.00 4.52
965 1147 3.143675 GTCAGAATGGCAGCGAGAA 57.856 52.632 0.00 0.00 43.01 2.87
977 1159 1.993653 CCAGCAGATGGGGTCAGAA 59.006 57.895 0.00 0.00 46.36 3.02
989 1171 2.198827 TGTATGGGTTTGTCCAGCAG 57.801 50.000 0.00 0.00 40.56 4.24
992 1174 2.684881 GCAGATGTATGGGTTTGTCCAG 59.315 50.000 0.00 0.00 40.56 3.86
1004 1186 4.281941 AGATGTATGTGACCGCAGATGTAT 59.718 41.667 0.00 0.00 0.00 2.29
1016 1198 4.654091 TCGATGAAGCAGATGTATGTGA 57.346 40.909 0.00 0.00 0.00 3.58
1022 1204 4.154918 GGAAAAGTTCGATGAAGCAGATGT 59.845 41.667 0.00 0.00 0.00 3.06
1023 1205 4.437930 GGGAAAAGTTCGATGAAGCAGATG 60.438 45.833 0.00 0.00 0.00 2.90
1026 1208 2.162408 GGGGAAAAGTTCGATGAAGCAG 59.838 50.000 0.00 0.00 0.00 4.24
1039 1221 1.183030 GGGTTTCGGGTGGGGAAAAG 61.183 60.000 0.00 0.00 35.36 2.27
1200 1388 0.617820 GTTAGGGCCAGTGAGGAGGA 60.618 60.000 6.18 0.00 41.22 3.71
1299 1487 1.705186 CTGGTTTTTCCTCCTCCTCCA 59.295 52.381 0.00 0.00 37.07 3.86
1313 1504 2.981859 ACGAAGTGTGAGACTGGTTT 57.018 45.000 0.00 0.00 42.51 3.27
1369 1560 1.757682 AGTCTGTCTCGATCCAGTCC 58.242 55.000 10.28 4.46 0.00 3.85
1382 1573 5.513788 GGCAATCCCATACATCATAGTCTGT 60.514 44.000 0.00 0.00 0.00 3.41
1384 1575 4.323028 CGGCAATCCCATACATCATAGTCT 60.323 45.833 0.00 0.00 0.00 3.24
1387 1578 3.935203 GTCGGCAATCCCATACATCATAG 59.065 47.826 0.00 0.00 0.00 2.23
1430 1621 1.739067 GTGGATCTCCGTCCCTTTTG 58.261 55.000 0.00 0.00 37.48 2.44
1438 1629 0.611062 TGAACTCCGTGGATCTCCGT 60.611 55.000 0.00 0.00 39.43 4.69
1471 1662 2.512515 GTCCAGCAGGCCGTCATC 60.513 66.667 0.00 0.00 33.74 2.92
1481 1672 4.314440 GTGCACCTCCGTCCAGCA 62.314 66.667 5.22 0.00 0.00 4.41
1540 1731 2.151202 CCGGTCATAGCACAAAACACT 58.849 47.619 0.00 0.00 0.00 3.55
1544 1735 2.746904 CACATCCGGTCATAGCACAAAA 59.253 45.455 0.00 0.00 0.00 2.44
1602 1793 3.012518 CCCAGATACAAGCAGACAAAGG 58.987 50.000 0.00 0.00 0.00 3.11
1619 1810 3.465403 CTCCTCGCCCACTCCCAG 61.465 72.222 0.00 0.00 0.00 4.45
1626 1817 0.472543 ATCATCATCCTCCTCGCCCA 60.473 55.000 0.00 0.00 0.00 5.36
1636 1827 6.199154 CCGCGTATACAATAGAATCATCATCC 59.801 42.308 4.92 0.00 0.00 3.51
1647 1838 3.047796 GACACACCCGCGTATACAATAG 58.952 50.000 4.92 0.00 0.00 1.73
1649 1840 1.472026 GGACACACCCGCGTATACAAT 60.472 52.381 4.92 0.00 0.00 2.71
1653 1844 0.173935 CAAGGACACACCCGCGTATA 59.826 55.000 4.92 0.00 40.05 1.47
1676 1867 3.520290 ATTGCTCCAATTGCACATCTG 57.480 42.857 0.00 0.00 40.40 2.90
1754 1981 4.043310 TGGAACATGAAGACCAGAGGAATT 59.957 41.667 0.00 0.00 0.00 2.17
1838 2072 7.292713 TGCAAGCACCATCATAATATGAAAT 57.707 32.000 7.07 0.00 43.50 2.17
1854 2097 4.453819 ACTTCAGAACTTCTATGCAAGCAC 59.546 41.667 0.00 0.00 0.00 4.40
1857 2100 7.763528 AGTCATACTTCAGAACTTCTATGCAAG 59.236 37.037 0.00 0.00 0.00 4.01
1868 2111 5.719173 AGAGCTCAAGTCATACTTCAGAAC 58.281 41.667 17.77 0.00 36.03 3.01
1917 2160 1.488705 AAAGACATCCTCCACCGGCA 61.489 55.000 0.00 0.00 0.00 5.69
1950 2200 0.249657 GTCCTCCATGGCGATGAGTC 60.250 60.000 10.66 0.00 35.26 3.36
1957 2207 0.680921 AATTGGTGTCCTCCATGGCG 60.681 55.000 6.96 0.00 37.33 5.69
1971 2221 2.037511 ACATGTGCAAGACCCAAATTGG 59.962 45.455 4.74 4.74 37.25 3.16
1974 2224 1.619827 CCACATGTGCAAGACCCAAAT 59.380 47.619 20.81 0.00 0.00 2.32
2034 2285 2.093658 GTCCATGACGGTACTCCATTGT 60.094 50.000 0.00 0.00 35.57 2.71
2045 2296 2.010145 ATTCGTTGAGTCCATGACGG 57.990 50.000 0.00 0.00 37.67 4.79
2080 2331 0.680618 TGCGAACGGGAAGAAGGTTA 59.319 50.000 0.00 0.00 0.00 2.85
2098 2349 8.519799 TTAGTTTAAGCCTTCTATTGGGATTG 57.480 34.615 0.00 0.00 33.11 2.67
2212 2463 8.015658 GCACATAAACTTTCAGTCTTCGTTATT 58.984 33.333 0.00 0.00 0.00 1.40
2216 2467 5.057149 AGCACATAAACTTTCAGTCTTCGT 58.943 37.500 0.00 0.00 0.00 3.85
2217 2468 5.597813 AGCACATAAACTTTCAGTCTTCG 57.402 39.130 0.00 0.00 0.00 3.79
2382 2682 1.977188 TCGAGTGTTACATCGCACTG 58.023 50.000 1.71 0.00 44.89 3.66
2500 2920 5.766670 AGATTGTCAATGTGTCACATCACTT 59.233 36.000 18.66 10.15 37.97 3.16
2538 2958 2.858476 TGGCTGGCCTTTCCTCCA 60.858 61.111 13.05 0.00 36.38 3.86
2545 2965 1.302285 CATCTGAGTGGCTGGCCTT 59.698 57.895 13.05 1.22 36.94 4.35
2547 2967 2.827642 GCATCTGAGTGGCTGGCC 60.828 66.667 4.43 4.43 0.00 5.36
2548 2968 3.200593 CGCATCTGAGTGGCTGGC 61.201 66.667 0.00 0.00 0.00 4.85
2549 2969 1.812922 GACGCATCTGAGTGGCTGG 60.813 63.158 0.00 0.00 0.00 4.85
2550 2970 0.805322 GAGACGCATCTGAGTGGCTG 60.805 60.000 0.00 0.00 37.53 4.85
2552 2972 1.080995 GTGAGACGCATCTGAGTGGC 61.081 60.000 0.00 0.00 34.34 5.01
2553 2973 0.244721 TGTGAGACGCATCTGAGTGG 59.755 55.000 0.00 0.00 34.34 4.00
2566 3001 4.352893 TCAACCCTACATCATCTGTGAGA 58.647 43.478 0.00 0.00 38.92 3.27
2571 3006 5.942236 CCCATATTCAACCCTACATCATCTG 59.058 44.000 0.00 0.00 0.00 2.90
2572 3007 5.014544 CCCCATATTCAACCCTACATCATCT 59.985 44.000 0.00 0.00 0.00 2.90
2575 3010 3.181434 GCCCCATATTCAACCCTACATCA 60.181 47.826 0.00 0.00 0.00 3.07
2578 3013 2.174639 CAGCCCCATATTCAACCCTACA 59.825 50.000 0.00 0.00 0.00 2.74
2579 3014 2.863809 CAGCCCCATATTCAACCCTAC 58.136 52.381 0.00 0.00 0.00 3.18
2595 3030 3.971702 ACCTCCCAAGTGGCAGCC 61.972 66.667 3.66 3.66 0.00 4.85
2596 3031 2.674380 CACCTCCCAAGTGGCAGC 60.674 66.667 0.00 0.00 0.00 5.25
2611 3085 0.693049 AAGACCCATGTCACCTCCAC 59.307 55.000 0.00 0.00 44.33 4.02
2649 3123 2.227388 AGCAATGCAACAGCTACTGAAC 59.773 45.455 8.35 0.00 36.73 3.18
2664 3138 3.606777 CGATGAGAAAACAAGCAGCAATG 59.393 43.478 0.00 0.00 0.00 2.82
2666 3140 2.618241 ACGATGAGAAAACAAGCAGCAA 59.382 40.909 0.00 0.00 0.00 3.91
2708 3197 3.243367 GCTTACTCATGCCAACAACACAA 60.243 43.478 0.00 0.00 0.00 3.33
2716 3205 1.350684 TCACCTGCTTACTCATGCCAA 59.649 47.619 0.00 0.00 0.00 4.52
2724 3213 5.656213 AATACTACGTTCACCTGCTTACT 57.344 39.130 0.00 0.00 0.00 2.24
2741 3230 9.203163 ACTAGAGGTTCATTACAAGCTAATACT 57.797 33.333 0.00 0.00 34.21 2.12
2742 3231 9.819267 AACTAGAGGTTCATTACAAGCTAATAC 57.181 33.333 0.00 0.00 34.21 1.89
2748 3237 7.522374 CAAGAAACTAGAGGTTCATTACAAGC 58.478 38.462 9.88 0.00 37.12 4.01
2884 3523 4.277515 ACATCAGTACTTGACATGCAGT 57.722 40.909 1.53 0.00 38.99 4.40
2887 3526 5.446473 GCAGTAACATCAGTACTTGACATGC 60.446 44.000 1.53 3.30 38.99 4.06
2898 3537 7.611770 TCTAATACAACTGCAGTAACATCAGT 58.388 34.615 22.01 12.13 42.28 3.41
2909 3548 8.040727 ACATCATGTAGTTCTAATACAACTGCA 58.959 33.333 5.93 5.93 46.35 4.41
2916 3555 9.098355 TGAGCAAACATCATGTAGTTCTAATAC 57.902 33.333 0.00 0.00 0.00 1.89
2939 3580 7.935520 TCACTGTAGCATTTATACTCTCTGAG 58.064 38.462 0.00 0.00 35.52 3.35
2949 3590 9.559732 TGTAGCAATTATCACTGTAGCATTTAT 57.440 29.630 0.00 0.00 0.00 1.40
2950 3591 8.956533 TGTAGCAATTATCACTGTAGCATTTA 57.043 30.769 0.00 0.00 0.00 1.40
2994 3635 2.941480 CCCAAGCCTATGAGAAGCATT 58.059 47.619 0.00 0.00 38.44 3.56
3010 3654 6.873076 GTGAAAAATAGAACATTGATGCCCAA 59.127 34.615 0.00 0.00 39.41 4.12
3041 3685 9.801873 CGTTGGATGGAAATTTTACAGAATAAT 57.198 29.630 0.00 0.00 0.00 1.28
3042 3686 8.247562 CCGTTGGATGGAAATTTTACAGAATAA 58.752 33.333 0.00 0.00 0.00 1.40
3046 3690 5.074115 ACCGTTGGATGGAAATTTTACAGA 58.926 37.500 0.00 0.00 0.00 3.41
3047 3691 5.385509 ACCGTTGGATGGAAATTTTACAG 57.614 39.130 0.00 0.00 0.00 2.74
3050 3694 4.408276 TGGACCGTTGGATGGAAATTTTA 58.592 39.130 0.00 0.00 0.00 1.52
3054 3698 2.826674 ATGGACCGTTGGATGGAAAT 57.173 45.000 0.00 0.00 0.00 2.17
3055 3699 3.201045 TGATATGGACCGTTGGATGGAAA 59.799 43.478 0.00 0.00 0.00 3.13
3057 3701 2.403561 TGATATGGACCGTTGGATGGA 58.596 47.619 0.00 0.00 0.00 3.41
3058 3702 2.928801 TGATATGGACCGTTGGATGG 57.071 50.000 0.00 0.00 0.00 3.51
3059 3703 4.006780 TCATGATATGGACCGTTGGATG 57.993 45.455 0.00 0.00 0.00 3.51
3062 3706 4.388485 TGAATCATGATATGGACCGTTGG 58.612 43.478 9.04 0.00 0.00 3.77
3063 3707 5.049886 CACTGAATCATGATATGGACCGTTG 60.050 44.000 9.04 0.00 0.00 4.10
3064 3708 5.059161 CACTGAATCATGATATGGACCGTT 58.941 41.667 9.04 0.00 0.00 4.44
3066 3710 4.886579 TCACTGAATCATGATATGGACCG 58.113 43.478 9.04 0.00 0.00 4.79
3067 3711 7.230108 ACATTTCACTGAATCATGATATGGACC 59.770 37.037 9.04 0.00 38.11 4.46
3068 3712 8.162878 ACATTTCACTGAATCATGATATGGAC 57.837 34.615 9.04 0.00 38.11 4.02
3069 3713 7.172019 CGACATTTCACTGAATCATGATATGGA 59.828 37.037 9.04 0.29 38.11 3.41
3070 3714 7.041576 ACGACATTTCACTGAATCATGATATGG 60.042 37.037 9.04 4.55 38.11 2.74
3072 3716 7.496920 ACACGACATTTCACTGAATCATGATAT 59.503 33.333 9.04 0.00 0.00 1.63
3073 3717 6.818142 ACACGACATTTCACTGAATCATGATA 59.182 34.615 9.04 0.00 0.00 2.15
3074 3718 5.645067 ACACGACATTTCACTGAATCATGAT 59.355 36.000 1.18 1.18 0.00 2.45
3075 3719 4.996758 ACACGACATTTCACTGAATCATGA 59.003 37.500 0.00 0.00 0.00 3.07
3076 3720 5.287170 ACACGACATTTCACTGAATCATG 57.713 39.130 0.00 0.00 0.00 3.07
3077 3721 4.393062 GGACACGACATTTCACTGAATCAT 59.607 41.667 0.00 0.00 0.00 2.45
3081 3725 2.869801 GTGGACACGACATTTCACTGAA 59.130 45.455 0.00 0.00 0.00 3.02
3083 3727 2.209273 TGTGGACACGACATTTCACTG 58.791 47.619 0.00 0.00 0.00 3.66
3084 3728 2.613026 TGTGGACACGACATTTCACT 57.387 45.000 0.00 0.00 0.00 3.41
3087 3869 1.135689 GGCATGTGGACACGACATTTC 60.136 52.381 0.00 0.00 31.46 2.17
3102 3884 1.069296 CCAGTACAACAACACGGCATG 60.069 52.381 0.00 0.00 0.00 4.06
3169 3951 2.030717 TCGCAGTGAGTTGAGAGAACTC 60.031 50.000 7.48 7.48 45.12 3.01
3213 3995 4.308265 AGTTCTGAAACTCGGAAAGCTAC 58.692 43.478 0.00 0.00 42.78 3.58
3220 4003 4.950205 AGGTAAAGTTCTGAAACTCGGA 57.050 40.909 0.00 0.00 45.07 4.55
3252 4035 4.685169 AATACAAGATCCAAACACGCTG 57.315 40.909 0.00 0.00 0.00 5.18
3255 4038 6.362283 GGTGAAAAATACAAGATCCAAACACG 59.638 38.462 0.00 0.00 0.00 4.49
3262 4045 9.628500 AATACTAGGGTGAAAAATACAAGATCC 57.372 33.333 0.00 0.00 0.00 3.36
3294 4077 5.523438 TGTGGTTTGGATGGAGTTTTTAC 57.477 39.130 0.00 0.00 0.00 2.01
3296 4079 4.653341 TGATGTGGTTTGGATGGAGTTTTT 59.347 37.500 0.00 0.00 0.00 1.94
3302 4085 2.737544 CCATGATGTGGTTTGGATGGA 58.262 47.619 0.00 0.00 43.44 3.41
3314 4098 8.650143 AAAAAGTTACCTGATAACCATGATGT 57.350 30.769 0.00 0.00 43.82 3.06
3338 4122 5.330233 GGGGTCATCCTCCTTTTCTAAAAA 58.670 41.667 0.00 0.00 35.33 1.94
3339 4123 4.930696 GGGGTCATCCTCCTTTTCTAAAA 58.069 43.478 0.00 0.00 35.33 1.52
3340 4124 4.586306 GGGGTCATCCTCCTTTTCTAAA 57.414 45.455 0.00 0.00 35.33 1.85
3353 4137 3.866582 CAGAGGCCGGGGGTCATC 61.867 72.222 2.18 0.00 0.00 2.92
3359 4143 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
3360 4144 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
3361 4145 4.559063 CCCAGATGCAGAGGCCGG 62.559 72.222 0.00 0.00 40.13 6.13
3364 4148 3.472943 ATCGCCCAGATGCAGAGGC 62.473 63.158 8.59 8.59 42.18 4.70
3365 4149 2.827423 ATCGCCCAGATGCAGAGG 59.173 61.111 0.00 0.00 38.36 3.69
3372 4156 1.004560 CCGTATGCATCGCCCAGAT 60.005 57.895 0.19 0.00 41.01 2.90
3373 4157 2.421314 CCGTATGCATCGCCCAGA 59.579 61.111 0.19 0.00 0.00 3.86
3374 4158 3.349006 GCCGTATGCATCGCCCAG 61.349 66.667 0.19 0.00 40.77 4.45
3375 4159 4.927782 GGCCGTATGCATCGCCCA 62.928 66.667 17.54 0.00 43.89 5.36
3376 4160 4.927782 TGGCCGTATGCATCGCCC 62.928 66.667 22.75 16.75 43.89 6.13
3377 4161 3.649986 GTGGCCGTATGCATCGCC 61.650 66.667 20.23 20.23 43.89 5.54
3378 4162 1.714899 AAAGTGGCCGTATGCATCGC 61.715 55.000 0.19 3.34 43.89 4.58
3379 4163 1.577468 TAAAGTGGCCGTATGCATCG 58.423 50.000 0.19 7.03 43.89 3.84
3380 4164 5.682943 TTAATAAAGTGGCCGTATGCATC 57.317 39.130 0.19 0.00 43.89 3.91
3381 4165 6.648879 AATTAATAAAGTGGCCGTATGCAT 57.351 33.333 3.79 3.79 43.89 3.96
3382 4166 7.753309 ATAATTAATAAAGTGGCCGTATGCA 57.247 32.000 0.00 0.00 43.89 3.96
3383 4167 8.512138 AGAATAATTAATAAAGTGGCCGTATGC 58.488 33.333 0.00 0.00 40.16 3.14
3385 4169 9.787435 TGAGAATAATTAATAAAGTGGCCGTAT 57.213 29.630 0.00 0.00 0.00 3.06
3386 4170 9.048446 GTGAGAATAATTAATAAAGTGGCCGTA 57.952 33.333 0.00 0.00 0.00 4.02
3387 4171 7.554835 TGTGAGAATAATTAATAAAGTGGCCGT 59.445 33.333 0.00 0.00 0.00 5.68
3388 4172 7.925993 TGTGAGAATAATTAATAAAGTGGCCG 58.074 34.615 0.00 0.00 0.00 6.13
3389 4173 9.736023 CTTGTGAGAATAATTAATAAAGTGGCC 57.264 33.333 0.00 0.00 0.00 5.36
3401 4185 9.793259 TCTTTGTAAGGTCTTGTGAGAATAATT 57.207 29.630 0.00 0.00 32.66 1.40
3402 4186 9.442047 CTCTTTGTAAGGTCTTGTGAGAATAAT 57.558 33.333 0.00 0.00 32.66 1.28
3403 4187 7.878127 CCTCTTTGTAAGGTCTTGTGAGAATAA 59.122 37.037 0.00 0.00 32.66 1.40
3404 4188 7.386851 CCTCTTTGTAAGGTCTTGTGAGAATA 58.613 38.462 0.00 0.00 32.66 1.75
3405 4189 6.234177 CCTCTTTGTAAGGTCTTGTGAGAAT 58.766 40.000 0.00 0.00 32.66 2.40
3406 4190 5.454755 CCCTCTTTGTAAGGTCTTGTGAGAA 60.455 44.000 0.00 0.00 32.66 2.87
3407 4191 4.040461 CCCTCTTTGTAAGGTCTTGTGAGA 59.960 45.833 0.00 0.00 31.51 3.27
3408 4192 4.319177 CCCTCTTTGTAAGGTCTTGTGAG 58.681 47.826 0.00 0.00 31.51 3.51
3409 4193 3.072476 CCCCTCTTTGTAAGGTCTTGTGA 59.928 47.826 0.00 0.00 31.51 3.58
3410 4194 3.412386 CCCCTCTTTGTAAGGTCTTGTG 58.588 50.000 0.00 0.00 31.51 3.33
3411 4195 2.224793 GCCCCTCTTTGTAAGGTCTTGT 60.225 50.000 0.00 0.00 31.51 3.16
3412 4196 2.437413 GCCCCTCTTTGTAAGGTCTTG 58.563 52.381 0.00 0.00 31.51 3.02
3413 4197 1.003233 CGCCCCTCTTTGTAAGGTCTT 59.997 52.381 0.00 0.00 31.51 3.01
3414 4198 0.613777 CGCCCCTCTTTGTAAGGTCT 59.386 55.000 0.00 0.00 31.51 3.85
3415 4199 0.392595 CCGCCCCTCTTTGTAAGGTC 60.393 60.000 0.00 0.00 31.51 3.85
3416 4200 0.838987 TCCGCCCCTCTTTGTAAGGT 60.839 55.000 0.00 0.00 31.51 3.50
3417 4201 0.107654 CTCCGCCCCTCTTTGTAAGG 60.108 60.000 0.00 0.00 0.00 2.69
3418 4202 0.744771 GCTCCGCCCCTCTTTGTAAG 60.745 60.000 0.00 0.00 0.00 2.34
3419 4203 1.298667 GCTCCGCCCCTCTTTGTAA 59.701 57.895 0.00 0.00 0.00 2.41
3420 4204 2.666098 GGCTCCGCCCCTCTTTGTA 61.666 63.158 0.00 0.00 44.06 2.41
3421 4205 4.035102 GGCTCCGCCCCTCTTTGT 62.035 66.667 0.00 0.00 44.06 2.83
3458 4243 2.417339 TTTCTGACTTCGTCGTCTGG 57.583 50.000 11.41 4.90 34.95 3.86
3459 4244 6.633668 AATATTTTCTGACTTCGTCGTCTG 57.366 37.500 7.99 7.56 34.95 3.51
3460 4245 7.170998 ACAAAATATTTTCTGACTTCGTCGTCT 59.829 33.333 10.53 0.00 34.95 4.18
3466 4257 6.381801 AGGCACAAAATATTTTCTGACTTCG 58.618 36.000 16.35 4.42 31.51 3.79
3471 4262 6.647334 TGTGAGGCACAAAATATTTTCTGA 57.353 33.333 17.33 2.30 41.69 3.27
3552 4348 3.313249 GCTCCAGCTGCAAACAAAATTTT 59.687 39.130 8.66 0.00 38.21 1.82
3909 4707 1.499049 GTTGCTGCGCTAGGGTATAC 58.501 55.000 9.73 0.00 0.00 1.47
3926 4725 2.297033 GCTGTGTGATTTGTGATGGGTT 59.703 45.455 0.00 0.00 0.00 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.