Multiple sequence alignment - TraesCS5D01G540600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G540600 chr5D 100.000 3200 0 0 1 3200 551879156 551882355 0.000000e+00 5910.0
1 TraesCS5D01G540600 chr5D 91.212 1411 104 10 776 2170 561924578 561925984 0.000000e+00 1901.0
2 TraesCS5D01G540600 chr5D 90.773 1398 111 5 776 2158 561897243 561898637 0.000000e+00 1851.0
3 TraesCS5D01G540600 chr5D 90.870 1161 103 1 1013 2170 561643503 561642343 0.000000e+00 1554.0
4 TraesCS5D01G540600 chr5D 89.805 1079 84 9 776 1831 552859851 552858776 0.000000e+00 1360.0
5 TraesCS5D01G540600 chr5D 90.934 728 54 6 2 717 552860568 552859841 0.000000e+00 968.0
6 TraesCS5D01G540600 chr5D 89.790 715 62 4 10 717 561644485 561643775 0.000000e+00 905.0
7 TraesCS5D01G540600 chr5D 89.286 728 63 7 2 714 561923858 561924585 0.000000e+00 898.0
8 TraesCS5D01G540600 chr5D 90.318 692 56 7 10 697 561896549 561897233 0.000000e+00 896.0
9 TraesCS5D01G540600 chr5D 85.757 674 62 16 2544 3200 552858368 552857712 0.000000e+00 682.0
10 TraesCS5D01G540600 chr5D 86.039 659 56 13 2541 3175 561925977 561926623 0.000000e+00 675.0
11 TraesCS5D01G540600 chr5D 91.105 371 32 1 2171 2541 13633876 13633507 4.770000e-138 501.0
12 TraesCS5D01G540600 chr5D 91.739 230 19 0 776 1005 561643785 561643556 1.430000e-83 320.0
13 TraesCS5D01G540600 chr5D 92.000 50 2 2 721 770 551879831 551879878 5.730000e-08 69.4
14 TraesCS5D01G540600 chr5D 100.000 29 0 0 721 749 552859882 552859854 2.000000e-03 54.7
15 TraesCS5D01G540600 chr5B 91.529 1393 97 6 776 2150 711963141 711964530 0.000000e+00 1899.0
16 TraesCS5D01G540600 chr5B 90.534 1405 113 4 776 2164 711736627 711738027 0.000000e+00 1840.0
17 TraesCS5D01G540600 chr5B 89.143 1400 126 9 791 2168 711931704 711933099 0.000000e+00 1720.0
18 TraesCS5D01G540600 chr5B 90.712 1152 107 0 1014 2165 711412351 711411200 0.000000e+00 1535.0
19 TraesCS5D01G540600 chr5B 91.785 706 50 6 10 714 711930998 711931696 0.000000e+00 976.0
20 TraesCS5D01G540600 chr5B 90.254 708 66 1 10 714 712207531 712208238 0.000000e+00 922.0
21 TraesCS5D01G540600 chr5B 87.253 659 54 13 2552 3195 711351204 711350561 0.000000e+00 725.0
22 TraesCS5D01G540600 chr5B 92.711 439 32 0 2546 2984 711964548 711964986 4.500000e-178 634.0
23 TraesCS5D01G540600 chr5B 85.502 607 66 11 2546 3141 711411197 711410602 5.870000e-172 614.0
24 TraesCS5D01G540600 chr5B 93.361 241 16 0 776 1016 712208231 712208471 1.090000e-94 357.0
25 TraesCS5D01G540600 chr5B 85.269 353 31 8 2854 3200 711738309 711738646 8.500000e-91 344.0
26 TraesCS5D01G540600 chr5B 88.372 215 25 0 791 1005 711412610 711412396 3.170000e-65 259.0
27 TraesCS5D01G540600 chr5B 100.000 29 0 0 721 749 711736596 711736624 2.000000e-03 54.7
28 TraesCS5D01G540600 chr5B 100.000 29 0 0 721 749 712208200 712208228 2.000000e-03 54.7
29 TraesCS5D01G540600 chr4D 90.078 1411 117 10 776 2170 509853696 509852293 0.000000e+00 1808.0
30 TraesCS5D01G540600 chr4D 90.909 374 33 1 2171 2544 506622658 506622286 4.770000e-138 501.0
31 TraesCS5D01G540600 chr4D 87.814 279 30 2 2544 2819 509852297 509852020 1.110000e-84 324.0
32 TraesCS5D01G540600 chr4B 90.000 1410 120 8 776 2170 656880328 656881731 0.000000e+00 1803.0
33 TraesCS5D01G540600 chr4B 88.298 282 29 2 2541 2819 656881724 656882004 5.110000e-88 335.0
34 TraesCS5D01G540600 chr7B 89.124 1416 122 14 776 2164 1349405 1350815 0.000000e+00 1733.0
35 TraesCS5D01G540600 chr7B 89.038 1414 132 10 776 2170 1305937 1307346 0.000000e+00 1731.0
36 TraesCS5D01G540600 chr7B 91.451 1158 96 1 1013 2170 889424 888270 0.000000e+00 1587.0
37 TraesCS5D01G540600 chr7B 91.632 717 51 5 4 717 834483 833773 0.000000e+00 983.0
38 TraesCS5D01G540600 chr7B 89.481 713 66 7 8 717 1036851 1036145 0.000000e+00 893.0
39 TraesCS5D01G540600 chr7B 89.437 710 66 4 8 714 1305241 1305944 0.000000e+00 887.0
40 TraesCS5D01G540600 chr7B 87.215 657 69 6 2544 3200 883803 883162 0.000000e+00 734.0
41 TraesCS5D01G540600 chr7B 87.215 657 69 6 2544 3200 888274 887633 0.000000e+00 734.0
42 TraesCS5D01G540600 chr7B 87.380 626 45 15 2541 3155 832395 831793 0.000000e+00 688.0
43 TraesCS5D01G540600 chr7B 85.479 668 70 9 2545 3200 1350818 1351470 0.000000e+00 671.0
44 TraesCS5D01G540600 chr7B 85.370 663 75 12 2544 3186 1034768 1034108 0.000000e+00 667.0
45 TraesCS5D01G540600 chr7B 84.692 503 47 8 2701 3200 849071 849546 2.890000e-130 475.0
46 TraesCS5D01G540600 chr7B 88.068 352 24 4 2852 3200 1101894 1101558 4.970000e-108 401.0
47 TraesCS5D01G540600 chr7B 87.288 354 33 3 2854 3195 1307598 1307951 8.320000e-106 394.0
48 TraesCS5D01G540600 chr7B 92.174 230 18 0 776 1005 833783 833554 3.080000e-85 326.0
49 TraesCS5D01G540600 chr7B 91.739 230 19 0 776 1005 889703 889474 1.430000e-83 320.0
50 TraesCS5D01G540600 chr7B 100.000 29 0 0 721 749 833814 833786 2.000000e-03 54.7
51 TraesCS5D01G540600 chr7B 100.000 29 0 0 721 749 889734 889706 2.000000e-03 54.7
52 TraesCS5D01G540600 chr7B 100.000 29 0 0 721 749 1305906 1305934 2.000000e-03 54.7
53 TraesCS5D01G540600 chrUn 92.162 370 28 1 2171 2540 96290034 96289666 3.660000e-144 521.0
54 TraesCS5D01G540600 chrUn 91.153 373 30 3 2171 2542 96741494 96741864 1.330000e-138 503.0
55 TraesCS5D01G540600 chr2D 91.200 375 31 2 2171 2544 624267663 624267290 2.850000e-140 508.0
56 TraesCS5D01G540600 chr5A 91.375 371 31 1 2170 2540 554786743 554786374 1.020000e-139 507.0
57 TraesCS5D01G540600 chr7D 91.176 374 30 3 2170 2541 92269570 92269198 3.680000e-139 505.0
58 TraesCS5D01G540600 chr7A 91.105 371 31 2 2171 2540 14461080 14460711 4.770000e-138 501.0
59 TraesCS5D01G540600 chr4A 90.885 373 33 1 2168 2540 724874859 724875230 1.710000e-137 499.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G540600 chr5D 551879156 551882355 3199 False 2989.700000 5910 96.000000 1 3200 2 chr5D.!!$F1 3199
1 TraesCS5D01G540600 chr5D 561896549 561898637 2088 False 1373.500000 1851 90.545500 10 2158 2 chr5D.!!$F2 2148
2 TraesCS5D01G540600 chr5D 561923858 561926623 2765 False 1158.000000 1901 88.845667 2 3175 3 chr5D.!!$F3 3173
3 TraesCS5D01G540600 chr5D 561642343 561644485 2142 True 926.333333 1554 90.799667 10 2170 3 chr5D.!!$R3 2160
4 TraesCS5D01G540600 chr5D 552857712 552860568 2856 True 766.175000 1360 91.624000 2 3200 4 chr5D.!!$R2 3198
5 TraesCS5D01G540600 chr5B 711930998 711933099 2101 False 1348.000000 1720 90.464000 10 2168 2 chr5B.!!$F2 2158
6 TraesCS5D01G540600 chr5B 711963141 711964986 1845 False 1266.500000 1899 92.120000 776 2984 2 chr5B.!!$F3 2208
7 TraesCS5D01G540600 chr5B 711410602 711412610 2008 True 802.666667 1535 88.195333 791 3141 3 chr5B.!!$R2 2350
8 TraesCS5D01G540600 chr5B 711736596 711738646 2050 False 746.233333 1840 91.934333 721 3200 3 chr5B.!!$F1 2479
9 TraesCS5D01G540600 chr5B 711350561 711351204 643 True 725.000000 725 87.253000 2552 3195 1 chr5B.!!$R1 643
10 TraesCS5D01G540600 chr5B 712207531 712208471 940 False 444.566667 922 94.538333 10 1016 3 chr5B.!!$F4 1006
11 TraesCS5D01G540600 chr4D 509852020 509853696 1676 True 1066.000000 1808 88.946000 776 2819 2 chr4D.!!$R2 2043
12 TraesCS5D01G540600 chr4B 656880328 656882004 1676 False 1069.000000 1803 89.149000 776 2819 2 chr4B.!!$F1 2043
13 TraesCS5D01G540600 chr7B 1349405 1351470 2065 False 1202.000000 1733 87.301500 776 3200 2 chr7B.!!$F3 2424
14 TraesCS5D01G540600 chr7B 1034108 1036851 2743 True 780.000000 893 87.425500 8 3186 2 chr7B.!!$R4 3178
15 TraesCS5D01G540600 chr7B 1305241 1307951 2710 False 766.675000 1731 91.440750 8 3195 4 chr7B.!!$F2 3187
16 TraesCS5D01G540600 chr7B 883162 889734 6572 True 685.940000 1587 91.524000 721 3200 5 chr7B.!!$R3 2479
17 TraesCS5D01G540600 chr7B 831793 834483 2690 True 512.925000 983 92.796500 4 3155 4 chr7B.!!$R2 3151

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
178 197 2.035961 CCAGTCTGGGTATGTGTATCCG 59.964 54.545 11.46 0.0 33.45 4.18 F
1632 1780 1.285078 GTAAGGAAAGGGAGCATGGGT 59.715 52.381 0.00 0.0 0.00 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2174 2409 0.100861 TTTCGACCGGCAACCAAAAC 59.899 50.0 0.0 0.0 0.00 2.43 R
2499 2734 0.033503 AGGCATTTTTACCGAGGGGG 60.034 55.0 0.0 0.0 43.62 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 5.471556 TTGAGGAAACTGTCAACCGTATA 57.528 39.130 0.00 0.00 44.43 1.47
40 41 6.183360 GGAAACTGTCAACCGTATAACTGATG 60.183 42.308 0.00 0.00 0.00 3.07
42 43 3.527533 TGTCAACCGTATAACTGATGCC 58.472 45.455 0.00 0.00 0.00 4.40
178 197 2.035961 CCAGTCTGGGTATGTGTATCCG 59.964 54.545 11.46 0.00 33.45 4.18
305 333 3.473923 TCAGAAATCCATAGCGCATCA 57.526 42.857 11.47 0.00 0.00 3.07
312 340 3.473923 TCCATAGCGCATCATCTCAAA 57.526 42.857 11.47 0.00 0.00 2.69
534 562 8.114331 TCTTCACATTCTTTGAAGCATGTATT 57.886 30.769 8.34 0.00 46.51 1.89
576 604 4.334759 CCTGAGCATTACCAAGATGAGTTG 59.665 45.833 0.00 0.00 0.00 3.16
704 732 4.516698 TGGAGTTCTTGAAAAGCATCAGTC 59.483 41.667 0.00 0.00 45.70 3.51
705 733 4.759183 GGAGTTCTTGAAAAGCATCAGTCT 59.241 41.667 0.00 0.00 45.70 3.24
706 734 5.240403 GGAGTTCTTGAAAAGCATCAGTCTT 59.760 40.000 0.00 0.00 45.70 3.01
707 735 6.238869 GGAGTTCTTGAAAAGCATCAGTCTTT 60.239 38.462 0.00 0.00 45.70 2.52
708 736 7.041098 GGAGTTCTTGAAAAGCATCAGTCTTTA 60.041 37.037 0.00 0.00 45.70 1.85
709 737 8.225603 AGTTCTTGAAAAGCATCAGTCTTTAA 57.774 30.769 0.00 0.00 45.70 1.52
710 738 8.686334 AGTTCTTGAAAAGCATCAGTCTTTAAA 58.314 29.630 0.00 0.00 45.70 1.52
711 739 8.962111 GTTCTTGAAAAGCATCAGTCTTTAAAG 58.038 33.333 9.04 9.04 45.70 1.85
712 740 7.141363 TCTTGAAAAGCATCAGTCTTTAAAGC 58.859 34.615 10.51 6.00 45.70 3.51
713 741 6.389830 TGAAAAGCATCAGTCTTTAAAGCA 57.610 33.333 10.51 0.00 33.77 3.91
714 742 6.985117 TGAAAAGCATCAGTCTTTAAAGCAT 58.015 32.000 10.51 0.00 33.77 3.79
715 743 7.086376 TGAAAAGCATCAGTCTTTAAAGCATC 58.914 34.615 10.51 3.95 33.77 3.91
716 744 6.579666 AAAGCATCAGTCTTTAAAGCATCA 57.420 33.333 10.51 0.00 32.50 3.07
717 745 5.814764 AGCATCAGTCTTTAAAGCATCAG 57.185 39.130 10.51 1.60 0.00 2.90
718 746 5.251764 AGCATCAGTCTTTAAAGCATCAGT 58.748 37.500 10.51 0.00 0.00 3.41
719 747 5.353678 AGCATCAGTCTTTAAAGCATCAGTC 59.646 40.000 10.51 0.00 0.00 3.51
749 777 4.516698 TGGAGTTCTTGAAAAGCATCAGTC 59.483 41.667 0.00 0.00 45.70 3.51
750 778 4.759183 GGAGTTCTTGAAAAGCATCAGTCT 59.241 41.667 0.00 0.00 45.70 3.24
751 779 5.240403 GGAGTTCTTGAAAAGCATCAGTCTT 59.760 40.000 0.00 0.00 45.70 3.01
752 780 6.069684 AGTTCTTGAAAAGCATCAGTCTTG 57.930 37.500 0.00 0.00 45.70 3.02
753 781 5.824624 AGTTCTTGAAAAGCATCAGTCTTGA 59.175 36.000 0.00 0.00 45.70 3.02
754 782 6.319658 AGTTCTTGAAAAGCATCAGTCTTGAA 59.680 34.615 0.00 0.00 45.70 2.69
755 783 6.698008 TCTTGAAAAGCATCAGTCTTGAAA 57.302 33.333 0.00 0.00 45.70 2.69
756 784 7.099266 TCTTGAAAAGCATCAGTCTTGAAAA 57.901 32.000 0.00 0.00 45.70 2.29
757 785 7.198390 TCTTGAAAAGCATCAGTCTTGAAAAG 58.802 34.615 0.00 0.00 45.70 2.27
758 786 5.284079 TGAAAAGCATCAGTCTTGAAAAGC 58.716 37.500 0.00 0.00 45.70 3.51
759 787 4.924305 AAAGCATCAGTCTTGAAAAGCA 57.076 36.364 0.00 0.00 45.70 3.91
760 788 5.464030 AAAGCATCAGTCTTGAAAAGCAT 57.536 34.783 0.00 0.00 45.70 3.79
761 789 6.579666 AAAGCATCAGTCTTGAAAAGCATA 57.420 33.333 0.00 0.00 45.70 3.14
762 790 6.579666 AAGCATCAGTCTTGAAAAGCATAA 57.420 33.333 0.00 0.00 45.70 1.90
763 791 6.192234 AGCATCAGTCTTGAAAAGCATAAG 57.808 37.500 0.00 0.00 45.70 1.73
764 792 5.709164 AGCATCAGTCTTGAAAAGCATAAGT 59.291 36.000 0.00 0.00 45.70 2.24
765 793 6.208204 AGCATCAGTCTTGAAAAGCATAAGTT 59.792 34.615 0.00 0.00 45.70 2.66
766 794 6.525976 GCATCAGTCTTGAAAAGCATAAGTTC 59.474 38.462 0.00 0.00 45.70 3.01
767 795 7.574592 GCATCAGTCTTGAAAAGCATAAGTTCT 60.575 37.037 0.00 0.00 45.70 3.01
768 796 7.807977 TCAGTCTTGAAAAGCATAAGTTCTT 57.192 32.000 0.00 0.00 45.70 2.52
769 797 7.642669 TCAGTCTTGAAAAGCATAAGTTCTTG 58.357 34.615 0.00 0.00 45.70 3.02
770 798 7.498900 TCAGTCTTGAAAAGCATAAGTTCTTGA 59.501 33.333 0.00 0.00 45.70 3.02
771 799 8.295288 CAGTCTTGAAAAGCATAAGTTCTTGAT 58.705 33.333 0.00 0.00 45.70 2.57
772 800 8.510505 AGTCTTGAAAAGCATAAGTTCTTGATC 58.489 33.333 0.00 0.00 45.70 2.92
773 801 7.752686 GTCTTGAAAAGCATAAGTTCTTGATCC 59.247 37.037 0.00 0.00 45.70 3.36
774 802 7.448161 TCTTGAAAAGCATAAGTTCTTGATCCA 59.552 33.333 0.00 0.00 45.70 3.41
855 886 5.889853 CCTCCCATTTGATCTGAAGAAATGA 59.110 40.000 18.89 6.31 38.72 2.57
987 1018 7.182930 AGGAATTACTTGGAAGAACTAGTGGAT 59.817 37.037 0.00 0.00 0.00 3.41
1005 1036 7.396540 AGTGGATATTGGTTTTCTCATGAAC 57.603 36.000 0.00 0.00 31.02 3.18
1135 1280 4.062293 CCCACAATCTGTTCGACACTTAA 58.938 43.478 0.00 0.00 0.00 1.85
1388 1536 5.491078 TCCACCTCCAGTACCTCAAAATTAT 59.509 40.000 0.00 0.00 0.00 1.28
1509 1657 5.869579 TCTGATTTGCCTGAAGACTTTAGT 58.130 37.500 6.27 0.00 0.00 2.24
1632 1780 1.285078 GTAAGGAAAGGGAGCATGGGT 59.715 52.381 0.00 0.00 0.00 4.51
1643 1791 2.627699 GGAGCATGGGTTTTGAACTGAA 59.372 45.455 0.00 0.00 0.00 3.02
1676 1824 2.175878 TTGACAGAGCTTGAAGGAGC 57.824 50.000 0.00 0.00 43.02 4.70
1680 1828 2.232452 GACAGAGCTTGAAGGAGCACTA 59.768 50.000 0.00 0.00 45.12 2.74
1766 1914 2.797177 AGGAATCTGAAGGAACTGGC 57.203 50.000 0.00 0.00 40.86 4.85
1930 2165 7.382759 GGTTAACAAGTTTAGAGAGACTCACTG 59.617 40.741 12.17 0.00 32.06 3.66
1948 2183 2.159085 ACTGTAGAAGGCGTATCTTGGC 60.159 50.000 0.00 0.00 0.00 4.52
2002 2237 5.443185 TCTCAAGCAACTCAAATTGAAGG 57.557 39.130 0.00 0.00 31.70 3.46
2089 2324 5.571741 CGCTTGAAGACAGTCGAGTTTTATA 59.428 40.000 0.00 0.00 32.33 0.98
2168 2403 3.726291 TGGAGAAATCATATGCGTCGA 57.274 42.857 0.00 0.00 0.00 4.20
2169 2404 4.257267 TGGAGAAATCATATGCGTCGAT 57.743 40.909 0.00 0.00 0.00 3.59
2170 2405 4.237724 TGGAGAAATCATATGCGTCGATC 58.762 43.478 0.00 0.00 0.00 3.69
2171 2406 4.237724 GGAGAAATCATATGCGTCGATCA 58.762 43.478 0.00 0.00 0.00 2.92
2172 2407 4.686091 GGAGAAATCATATGCGTCGATCAA 59.314 41.667 0.00 0.00 0.00 2.57
2173 2408 5.164012 GGAGAAATCATATGCGTCGATCAAG 60.164 44.000 0.00 0.00 0.00 3.02
2174 2409 4.687948 AGAAATCATATGCGTCGATCAAGG 59.312 41.667 0.00 0.00 0.00 3.61
2175 2410 3.667497 ATCATATGCGTCGATCAAGGT 57.333 42.857 0.00 0.00 0.00 3.50
2176 2411 3.452755 TCATATGCGTCGATCAAGGTT 57.547 42.857 0.00 0.00 0.00 3.50
2177 2412 3.792401 TCATATGCGTCGATCAAGGTTT 58.208 40.909 0.00 0.00 0.00 3.27
2178 2413 4.188462 TCATATGCGTCGATCAAGGTTTT 58.812 39.130 0.00 0.00 0.00 2.43
2179 2414 2.900122 ATGCGTCGATCAAGGTTTTG 57.100 45.000 0.00 0.00 35.57 2.44
2180 2415 0.871722 TGCGTCGATCAAGGTTTTGG 59.128 50.000 0.00 0.00 34.97 3.28
2181 2416 0.872388 GCGTCGATCAAGGTTTTGGT 59.128 50.000 0.00 0.00 34.97 3.67
2182 2417 1.265905 GCGTCGATCAAGGTTTTGGTT 59.734 47.619 0.00 0.00 34.97 3.67
2183 2418 2.916111 CGTCGATCAAGGTTTTGGTTG 58.084 47.619 0.00 0.00 34.97 3.77
2184 2419 2.661594 GTCGATCAAGGTTTTGGTTGC 58.338 47.619 0.00 0.00 34.97 4.17
2185 2420 1.611491 TCGATCAAGGTTTTGGTTGCC 59.389 47.619 0.00 0.00 34.97 4.52
2186 2421 1.665735 CGATCAAGGTTTTGGTTGCCG 60.666 52.381 0.00 0.00 34.97 5.69
2187 2422 0.678950 ATCAAGGTTTTGGTTGCCGG 59.321 50.000 0.00 0.00 34.97 6.13
2188 2423 0.684805 TCAAGGTTTTGGTTGCCGGT 60.685 50.000 1.90 0.00 34.97 5.28
2189 2424 0.249280 CAAGGTTTTGGTTGCCGGTC 60.249 55.000 1.90 0.00 0.00 4.79
2190 2425 1.730451 AAGGTTTTGGTTGCCGGTCG 61.730 55.000 1.90 0.00 0.00 4.79
2191 2426 2.188161 GGTTTTGGTTGCCGGTCGA 61.188 57.895 1.90 0.00 0.00 4.20
2192 2427 1.726533 GGTTTTGGTTGCCGGTCGAA 61.727 55.000 1.90 0.00 0.00 3.71
2193 2428 0.100861 GTTTTGGTTGCCGGTCGAAA 59.899 50.000 1.90 1.52 0.00 3.46
2194 2429 1.033574 TTTTGGTTGCCGGTCGAAAT 58.966 45.000 1.90 0.00 0.00 2.17
2195 2430 1.033574 TTTGGTTGCCGGTCGAAATT 58.966 45.000 1.90 0.00 0.00 1.82
2196 2431 1.033574 TTGGTTGCCGGTCGAAATTT 58.966 45.000 1.90 0.00 0.00 1.82
2197 2432 1.033574 TGGTTGCCGGTCGAAATTTT 58.966 45.000 1.90 0.00 0.00 1.82
2198 2433 2.228059 TGGTTGCCGGTCGAAATTTTA 58.772 42.857 1.90 0.00 0.00 1.52
2199 2434 2.621998 TGGTTGCCGGTCGAAATTTTAA 59.378 40.909 1.90 0.00 0.00 1.52
2200 2435 3.239254 GGTTGCCGGTCGAAATTTTAAG 58.761 45.455 1.90 0.00 0.00 1.85
2201 2436 3.058085 GGTTGCCGGTCGAAATTTTAAGA 60.058 43.478 1.90 0.00 0.00 2.10
2202 2437 4.380128 GGTTGCCGGTCGAAATTTTAAGAT 60.380 41.667 1.90 0.00 0.00 2.40
2203 2438 5.158494 GTTGCCGGTCGAAATTTTAAGATT 58.842 37.500 1.90 0.00 0.00 2.40
2204 2439 5.379732 TGCCGGTCGAAATTTTAAGATTT 57.620 34.783 1.90 3.75 32.16 2.17
2205 2440 5.395642 TGCCGGTCGAAATTTTAAGATTTC 58.604 37.500 17.42 17.42 40.80 2.17
2206 2441 4.796830 GCCGGTCGAAATTTTAAGATTTCC 59.203 41.667 20.08 10.26 41.02 3.13
2207 2442 5.337554 CCGGTCGAAATTTTAAGATTTCCC 58.662 41.667 20.08 16.21 41.02 3.97
2208 2443 5.106078 CCGGTCGAAATTTTAAGATTTCCCA 60.106 40.000 20.08 8.87 41.02 4.37
2209 2444 6.405397 CCGGTCGAAATTTTAAGATTTCCCAT 60.405 38.462 20.08 0.00 41.02 4.00
2210 2445 6.472163 CGGTCGAAATTTTAAGATTTCCCATG 59.528 38.462 20.08 10.22 41.02 3.66
2211 2446 6.756542 GGTCGAAATTTTAAGATTTCCCATGG 59.243 38.462 20.08 4.14 41.02 3.66
2212 2447 7.320399 GTCGAAATTTTAAGATTTCCCATGGT 58.680 34.615 20.08 0.00 41.02 3.55
2213 2448 7.817478 GTCGAAATTTTAAGATTTCCCATGGTT 59.183 33.333 20.08 0.00 41.02 3.67
2214 2449 9.026121 TCGAAATTTTAAGATTTCCCATGGTTA 57.974 29.630 20.08 0.00 41.02 2.85
2215 2450 9.083080 CGAAATTTTAAGATTTCCCATGGTTAC 57.917 33.333 20.08 0.00 41.02 2.50
2216 2451 9.378551 GAAATTTTAAGATTTCCCATGGTTACC 57.621 33.333 16.83 0.00 39.16 2.85
2217 2452 6.518208 TTTTAAGATTTCCCATGGTTACCG 57.482 37.500 11.73 0.00 0.00 4.02
2218 2453 3.732048 AAGATTTCCCATGGTTACCGT 57.268 42.857 11.73 0.00 0.00 4.83
2219 2454 2.999331 AGATTTCCCATGGTTACCGTG 58.001 47.619 16.22 16.22 40.02 4.94
2220 2455 2.307686 AGATTTCCCATGGTTACCGTGT 59.692 45.455 20.69 3.25 38.76 4.49
2221 2456 3.520317 AGATTTCCCATGGTTACCGTGTA 59.480 43.478 20.69 7.25 38.76 2.90
2222 2457 4.165372 AGATTTCCCATGGTTACCGTGTAT 59.835 41.667 20.69 9.44 38.76 2.29
2223 2458 4.304048 TTTCCCATGGTTACCGTGTATT 57.696 40.909 20.69 0.00 38.76 1.89
2224 2459 4.304048 TTCCCATGGTTACCGTGTATTT 57.696 40.909 20.69 0.00 38.76 1.40
2225 2460 3.876341 TCCCATGGTTACCGTGTATTTC 58.124 45.455 20.69 0.00 38.76 2.17
2226 2461 2.946990 CCCATGGTTACCGTGTATTTCC 59.053 50.000 20.69 0.00 38.76 3.13
2227 2462 2.610374 CCATGGTTACCGTGTATTTCCG 59.390 50.000 20.69 1.61 38.76 4.30
2228 2463 3.264104 CATGGTTACCGTGTATTTCCGT 58.736 45.455 15.05 0.00 35.92 4.69
2229 2464 2.686235 TGGTTACCGTGTATTTCCGTG 58.314 47.619 0.00 0.00 0.00 4.94
2230 2465 1.394572 GGTTACCGTGTATTTCCGTGC 59.605 52.381 0.00 0.00 0.00 5.34
2231 2466 1.394572 GTTACCGTGTATTTCCGTGCC 59.605 52.381 0.00 0.00 0.00 5.01
2232 2467 0.108233 TACCGTGTATTTCCGTGCCC 60.108 55.000 0.00 0.00 0.00 5.36
2233 2468 2.110352 CCGTGTATTTCCGTGCCCC 61.110 63.158 0.00 0.00 0.00 5.80
2234 2469 1.078708 CGTGTATTTCCGTGCCCCT 60.079 57.895 0.00 0.00 0.00 4.79
2235 2470 1.087771 CGTGTATTTCCGTGCCCCTC 61.088 60.000 0.00 0.00 0.00 4.30
2236 2471 1.087771 GTGTATTTCCGTGCCCCTCG 61.088 60.000 0.00 0.00 0.00 4.63
2238 2473 1.991167 TATTTCCGTGCCCCTCGGT 60.991 57.895 4.36 0.00 46.86 4.69
2239 2474 0.687098 TATTTCCGTGCCCCTCGGTA 60.687 55.000 4.36 0.00 46.86 4.02
2240 2475 1.555477 ATTTCCGTGCCCCTCGGTAA 61.555 55.000 4.36 1.98 46.86 2.85
2241 2476 1.766625 TTTCCGTGCCCCTCGGTAAA 61.767 55.000 4.36 2.21 46.86 2.01
2242 2477 1.555477 TTCCGTGCCCCTCGGTAAAT 61.555 55.000 4.36 0.00 46.86 1.40
2243 2478 1.523032 CCGTGCCCCTCGGTAAATC 60.523 63.158 0.00 0.00 42.62 2.17
2244 2479 1.523032 CGTGCCCCTCGGTAAATCC 60.523 63.158 0.00 0.00 0.00 3.01
2245 2480 1.605453 GTGCCCCTCGGTAAATCCA 59.395 57.895 0.00 0.00 35.57 3.41
2246 2481 0.182775 GTGCCCCTCGGTAAATCCAT 59.817 55.000 0.00 0.00 35.57 3.41
2247 2482 1.418637 GTGCCCCTCGGTAAATCCATA 59.581 52.381 0.00 0.00 35.57 2.74
2248 2483 2.039879 GTGCCCCTCGGTAAATCCATAT 59.960 50.000 0.00 0.00 35.57 1.78
2249 2484 2.039746 TGCCCCTCGGTAAATCCATATG 59.960 50.000 0.00 0.00 35.57 1.78
2250 2485 2.711542 CCCCTCGGTAAATCCATATGC 58.288 52.381 0.00 0.00 35.57 3.14
2251 2486 2.618045 CCCCTCGGTAAATCCATATGCC 60.618 54.545 0.00 0.00 35.57 4.40
2252 2487 2.346803 CCTCGGTAAATCCATATGCCG 58.653 52.381 10.01 10.01 40.43 5.69
2253 2488 2.028476 CCTCGGTAAATCCATATGCCGA 60.028 50.000 15.95 15.95 44.72 5.54
2254 2489 3.313012 TCGGTAAATCCATATGCCGAG 57.687 47.619 13.71 0.00 42.53 4.63
2255 2490 1.732259 CGGTAAATCCATATGCCGAGC 59.268 52.381 10.59 0.00 41.45 5.03
2256 2491 2.778299 GGTAAATCCATATGCCGAGCA 58.222 47.619 0.00 1.01 38.49 4.26
2257 2492 3.146066 GGTAAATCCATATGCCGAGCAA 58.854 45.455 0.00 0.00 37.95 3.91
2258 2493 3.568007 GGTAAATCCATATGCCGAGCAAA 59.432 43.478 0.00 0.00 37.95 3.68
2259 2494 4.037446 GGTAAATCCATATGCCGAGCAAAA 59.963 41.667 0.00 0.00 37.95 2.44
2260 2495 4.942761 AAATCCATATGCCGAGCAAAAT 57.057 36.364 0.00 0.00 43.62 1.82
2261 2496 6.072175 GGTAAATCCATATGCCGAGCAAAATA 60.072 38.462 0.00 0.00 37.95 1.40
2262 2497 6.594788 AAATCCATATGCCGAGCAAAATAT 57.405 33.333 0.00 0.00 43.62 1.28
2263 2498 7.701539 AAATCCATATGCCGAGCAAAATATA 57.298 32.000 0.00 0.00 43.62 0.86
2264 2499 6.683974 ATCCATATGCCGAGCAAAATATAC 57.316 37.500 0.00 0.00 43.62 1.47
2265 2500 4.941263 TCCATATGCCGAGCAAAATATACC 59.059 41.667 0.00 0.00 43.62 2.73
2266 2501 4.699735 CCATATGCCGAGCAAAATATACCA 59.300 41.667 0.00 0.00 43.62 3.25
2267 2502 5.357878 CCATATGCCGAGCAAAATATACCAT 59.642 40.000 0.00 0.00 43.62 3.55
2268 2503 6.127647 CCATATGCCGAGCAAAATATACCATT 60.128 38.462 0.00 0.00 43.62 3.16
2269 2504 5.789643 ATGCCGAGCAAAATATACCATTT 57.210 34.783 2.68 0.00 43.62 2.32
2270 2505 5.590530 TGCCGAGCAAAATATACCATTTT 57.409 34.783 0.00 0.00 34.76 1.82
2271 2506 5.971763 TGCCGAGCAAAATATACCATTTTT 58.028 33.333 0.00 0.00 34.76 1.94
2316 2551 9.846248 AAACACTCGATTTATAGTAAAGTACGT 57.154 29.630 0.00 0.00 0.00 3.57
2318 2553 9.922305 ACACTCGATTTATAGTAAAGTACGTAC 57.078 33.333 18.10 18.10 0.00 3.67
2319 2554 9.085934 CACTCGATTTATAGTAAAGTACGTACG 57.914 37.037 19.49 15.01 0.00 3.67
2320 2555 9.031360 ACTCGATTTATAGTAAAGTACGTACGA 57.969 33.333 24.41 6.97 0.00 3.43
2322 2557 9.797473 TCGATTTATAGTAAAGTACGTACGATG 57.203 33.333 24.41 0.00 0.00 3.84
2323 2558 9.586150 CGATTTATAGTAAAGTACGTACGATGT 57.414 33.333 24.41 1.48 0.00 3.06
2332 2567 9.769509 GTAAAGTACGTACGATGTAATTAATGC 57.230 33.333 24.41 0.00 29.08 3.56
2333 2568 6.998258 AGTACGTACGATGTAATTAATGCC 57.002 37.500 24.41 0.00 0.00 4.40
2334 2569 6.506147 AGTACGTACGATGTAATTAATGCCA 58.494 36.000 24.41 0.00 0.00 4.92
2335 2570 5.646467 ACGTACGATGTAATTAATGCCAC 57.354 39.130 24.41 0.00 0.00 5.01
2336 2571 4.207635 ACGTACGATGTAATTAATGCCACG 59.792 41.667 24.41 0.00 0.00 4.94
2337 2572 4.441744 CGTACGATGTAATTAATGCCACGA 59.558 41.667 10.44 0.00 0.00 4.35
2338 2573 5.387035 CGTACGATGTAATTAATGCCACGAG 60.387 44.000 10.44 0.00 0.00 4.18
2339 2574 4.689071 ACGATGTAATTAATGCCACGAGA 58.311 39.130 0.00 0.00 0.00 4.04
2340 2575 4.745125 ACGATGTAATTAATGCCACGAGAG 59.255 41.667 0.00 0.00 0.00 3.20
2342 2577 5.234329 CGATGTAATTAATGCCACGAGAGTT 59.766 40.000 0.00 0.00 46.40 3.01
2343 2578 5.794687 TGTAATTAATGCCACGAGAGTTG 57.205 39.130 0.00 0.00 46.40 3.16
2344 2579 4.634004 TGTAATTAATGCCACGAGAGTTGG 59.366 41.667 0.00 0.00 46.40 3.77
2345 2580 2.851263 TTAATGCCACGAGAGTTGGT 57.149 45.000 0.00 0.00 46.40 3.67
2346 2581 2.851263 TAATGCCACGAGAGTTGGTT 57.149 45.000 0.00 0.00 46.40 3.67
2347 2582 1.523758 AATGCCACGAGAGTTGGTTC 58.476 50.000 0.00 0.00 46.40 3.62
2348 2583 0.687354 ATGCCACGAGAGTTGGTTCT 59.313 50.000 0.00 0.00 46.40 3.01
2349 2584 0.249868 TGCCACGAGAGTTGGTTCTG 60.250 55.000 0.00 0.00 46.40 3.02
2350 2585 0.951040 GCCACGAGAGTTGGTTCTGG 60.951 60.000 0.00 0.00 46.40 3.86
2351 2586 0.393077 CCACGAGAGTTGGTTCTGGT 59.607 55.000 0.00 0.00 46.40 4.00
2352 2587 1.502231 CACGAGAGTTGGTTCTGGTG 58.498 55.000 4.25 4.25 46.40 4.17
2353 2588 1.120530 ACGAGAGTTGGTTCTGGTGT 58.879 50.000 0.00 0.00 46.40 4.16
2354 2589 1.202533 ACGAGAGTTGGTTCTGGTGTG 60.203 52.381 0.00 0.00 46.40 3.82
2355 2590 1.873903 CGAGAGTTGGTTCTGGTGTGG 60.874 57.143 0.00 0.00 0.00 4.17
2356 2591 1.141053 GAGAGTTGGTTCTGGTGTGGT 59.859 52.381 0.00 0.00 0.00 4.16
2357 2592 1.134098 AGAGTTGGTTCTGGTGTGGTG 60.134 52.381 0.00 0.00 0.00 4.17
2358 2593 0.106719 AGTTGGTTCTGGTGTGGTGG 60.107 55.000 0.00 0.00 0.00 4.61
2359 2594 0.395173 GTTGGTTCTGGTGTGGTGGT 60.395 55.000 0.00 0.00 0.00 4.16
2360 2595 1.134037 GTTGGTTCTGGTGTGGTGGTA 60.134 52.381 0.00 0.00 0.00 3.25
2361 2596 0.762418 TGGTTCTGGTGTGGTGGTAG 59.238 55.000 0.00 0.00 0.00 3.18
2362 2597 0.605589 GGTTCTGGTGTGGTGGTAGC 60.606 60.000 0.00 0.00 0.00 3.58
2363 2598 0.107831 GTTCTGGTGTGGTGGTAGCA 59.892 55.000 0.00 0.00 0.00 3.49
2364 2599 0.840617 TTCTGGTGTGGTGGTAGCAA 59.159 50.000 0.00 0.00 0.00 3.91
2365 2600 0.107831 TCTGGTGTGGTGGTAGCAAC 59.892 55.000 2.13 2.13 0.00 4.17
2366 2601 0.889186 CTGGTGTGGTGGTAGCAACC 60.889 60.000 7.64 7.03 46.98 3.77
2367 2602 1.349542 TGGTGTGGTGGTAGCAACCT 61.350 55.000 7.64 0.00 46.91 3.50
2368 2603 0.688487 GGTGTGGTGGTAGCAACCTA 59.312 55.000 7.64 0.00 46.91 3.08
2369 2604 1.338769 GGTGTGGTGGTAGCAACCTAG 60.339 57.143 7.64 0.00 46.91 3.02
2370 2605 1.346722 GTGTGGTGGTAGCAACCTAGT 59.653 52.381 7.64 0.00 46.91 2.57
2371 2606 2.051692 TGTGGTGGTAGCAACCTAGTT 58.948 47.619 7.64 0.00 46.91 2.24
2372 2607 2.038033 TGTGGTGGTAGCAACCTAGTTC 59.962 50.000 7.64 0.00 46.91 3.01
2373 2608 1.626825 TGGTGGTAGCAACCTAGTTCC 59.373 52.381 7.64 0.00 46.91 3.62
2374 2609 1.907255 GGTGGTAGCAACCTAGTTCCT 59.093 52.381 0.00 0.00 46.91 3.36
2375 2610 2.354805 GGTGGTAGCAACCTAGTTCCTG 60.355 54.545 0.00 0.00 46.91 3.86
2376 2611 2.302157 GTGGTAGCAACCTAGTTCCTGT 59.698 50.000 0.00 0.00 46.91 4.00
2377 2612 2.976882 TGGTAGCAACCTAGTTCCTGTT 59.023 45.455 0.00 0.00 46.91 3.16
2378 2613 3.393278 TGGTAGCAACCTAGTTCCTGTTT 59.607 43.478 0.00 0.00 46.91 2.83
2379 2614 4.141344 TGGTAGCAACCTAGTTCCTGTTTT 60.141 41.667 0.00 0.00 46.91 2.43
2380 2615 4.215613 GGTAGCAACCTAGTTCCTGTTTTG 59.784 45.833 0.00 0.00 43.08 2.44
2381 2616 4.164843 AGCAACCTAGTTCCTGTTTTGA 57.835 40.909 0.00 0.00 0.00 2.69
2382 2617 4.137543 AGCAACCTAGTTCCTGTTTTGAG 58.862 43.478 0.00 0.00 0.00 3.02
2383 2618 4.134563 GCAACCTAGTTCCTGTTTTGAGA 58.865 43.478 0.00 0.00 0.00 3.27
2384 2619 4.214332 GCAACCTAGTTCCTGTTTTGAGAG 59.786 45.833 0.00 0.00 0.00 3.20
2385 2620 4.625607 ACCTAGTTCCTGTTTTGAGAGG 57.374 45.455 0.00 0.00 0.00 3.69
2386 2621 3.974642 ACCTAGTTCCTGTTTTGAGAGGT 59.025 43.478 0.00 0.00 0.00 3.85
2387 2622 4.040584 ACCTAGTTCCTGTTTTGAGAGGTC 59.959 45.833 0.00 0.00 28.54 3.85
2388 2623 4.284746 CCTAGTTCCTGTTTTGAGAGGTCT 59.715 45.833 0.00 0.00 0.00 3.85
2389 2624 4.344359 AGTTCCTGTTTTGAGAGGTCTC 57.656 45.455 0.00 0.00 43.15 3.36
2390 2625 3.970640 AGTTCCTGTTTTGAGAGGTCTCT 59.029 43.478 8.44 0.00 43.25 3.10
2391 2626 4.061596 GTTCCTGTTTTGAGAGGTCTCTG 58.938 47.826 5.09 0.00 43.25 3.35
2392 2627 2.634940 TCCTGTTTTGAGAGGTCTCTGG 59.365 50.000 5.09 0.00 43.25 3.86
2393 2628 2.370189 CCTGTTTTGAGAGGTCTCTGGT 59.630 50.000 5.09 0.00 43.25 4.00
2394 2629 3.556004 CCTGTTTTGAGAGGTCTCTGGTC 60.556 52.174 5.09 0.00 43.25 4.02
2395 2630 2.368875 TGTTTTGAGAGGTCTCTGGTCC 59.631 50.000 5.09 0.00 43.25 4.46
2396 2631 2.368875 GTTTTGAGAGGTCTCTGGTCCA 59.631 50.000 5.09 0.00 43.25 4.02
2397 2632 2.398754 TTGAGAGGTCTCTGGTCCAA 57.601 50.000 5.09 1.05 43.25 3.53
2398 2633 2.398754 TGAGAGGTCTCTGGTCCAAA 57.601 50.000 5.09 0.00 43.25 3.28
2399 2634 2.907892 TGAGAGGTCTCTGGTCCAAAT 58.092 47.619 5.09 0.00 43.25 2.32
2400 2635 2.568956 TGAGAGGTCTCTGGTCCAAATG 59.431 50.000 5.09 0.00 43.25 2.32
2401 2636 2.569404 GAGAGGTCTCTGGTCCAAATGT 59.431 50.000 5.09 0.00 40.61 2.71
2402 2637 2.982488 AGAGGTCTCTGGTCCAAATGTT 59.018 45.455 0.00 0.00 38.75 2.71
2403 2638 3.395941 AGAGGTCTCTGGTCCAAATGTTT 59.604 43.478 0.00 0.00 38.75 2.83
2404 2639 3.490348 AGGTCTCTGGTCCAAATGTTTG 58.510 45.455 0.00 0.00 37.90 2.93
2405 2640 3.117512 AGGTCTCTGGTCCAAATGTTTGT 60.118 43.478 4.92 0.00 36.45 2.83
2406 2641 3.636764 GGTCTCTGGTCCAAATGTTTGTT 59.363 43.478 4.92 0.00 36.45 2.83
2407 2642 4.261614 GGTCTCTGGTCCAAATGTTTGTTC 60.262 45.833 4.92 0.00 36.45 3.18
2408 2643 4.338118 GTCTCTGGTCCAAATGTTTGTTCA 59.662 41.667 4.92 0.40 36.45 3.18
2409 2644 5.010012 GTCTCTGGTCCAAATGTTTGTTCAT 59.990 40.000 4.92 0.00 36.45 2.57
2410 2645 5.598005 TCTCTGGTCCAAATGTTTGTTCATT 59.402 36.000 4.92 0.00 39.35 2.57
2411 2646 5.841810 TCTGGTCCAAATGTTTGTTCATTC 58.158 37.500 4.92 0.00 37.09 2.67
2412 2647 5.362143 TCTGGTCCAAATGTTTGTTCATTCA 59.638 36.000 4.92 0.00 37.09 2.57
2413 2648 5.355596 TGGTCCAAATGTTTGTTCATTCAC 58.644 37.500 4.92 0.00 37.09 3.18
2414 2649 5.128499 TGGTCCAAATGTTTGTTCATTCACT 59.872 36.000 4.92 0.00 37.09 3.41
2415 2650 6.048509 GGTCCAAATGTTTGTTCATTCACTT 58.951 36.000 4.92 0.00 37.09 3.16
2416 2651 7.147828 TGGTCCAAATGTTTGTTCATTCACTTA 60.148 33.333 4.92 0.00 37.09 2.24
2417 2652 7.872483 GGTCCAAATGTTTGTTCATTCACTTAT 59.128 33.333 4.92 0.00 37.09 1.73
2418 2653 9.260002 GTCCAAATGTTTGTTCATTCACTTATT 57.740 29.630 4.92 0.00 37.09 1.40
2419 2654 9.829507 TCCAAATGTTTGTTCATTCACTTATTT 57.170 25.926 4.92 0.00 37.09 1.40
2420 2655 9.866936 CCAAATGTTTGTTCATTCACTTATTTG 57.133 29.630 4.92 0.00 37.09 2.32
2450 2685 9.272901 TCAAAATTCAGCTATAAAATTCGTTCG 57.727 29.630 0.00 0.00 0.00 3.95
2451 2686 9.272901 CAAAATTCAGCTATAAAATTCGTTCGA 57.727 29.630 0.00 0.00 0.00 3.71
2452 2687 9.834628 AAAATTCAGCTATAAAATTCGTTCGAA 57.165 25.926 9.97 9.97 0.00 3.71
2453 2688 9.834628 AAATTCAGCTATAAAATTCGTTCGAAA 57.165 25.926 11.50 0.00 0.00 3.46
2463 2698 6.657836 AAATTCGTTCGAAATATTCTCGGT 57.342 33.333 11.50 0.00 36.93 4.69
2464 2699 7.760131 AAATTCGTTCGAAATATTCTCGGTA 57.240 32.000 11.50 6.19 36.93 4.02
2465 2700 7.941795 AATTCGTTCGAAATATTCTCGGTAT 57.058 32.000 11.50 0.00 36.93 2.73
2466 2701 7.941795 ATTCGTTCGAAATATTCTCGGTATT 57.058 32.000 11.50 0.00 36.93 1.89
2467 2702 7.760131 TTCGTTCGAAATATTCTCGGTATTT 57.240 32.000 0.00 0.00 36.93 1.40
2468 2703 7.385668 TCGTTCGAAATATTCTCGGTATTTC 57.614 36.000 0.00 8.01 41.66 2.17
2469 2704 7.198390 TCGTTCGAAATATTCTCGGTATTTCT 58.802 34.615 0.00 0.00 42.35 2.52
2470 2705 7.377928 TCGTTCGAAATATTCTCGGTATTTCTC 59.622 37.037 0.00 6.33 42.35 2.87
2471 2706 7.491683 GTTCGAAATATTCTCGGTATTTCTCG 58.508 38.462 0.00 6.03 42.35 4.04
2472 2707 6.147581 TCGAAATATTCTCGGTATTTCTCGG 58.852 40.000 15.30 3.07 42.35 4.63
2473 2708 5.919141 CGAAATATTCTCGGTATTTCTCGGT 59.081 40.000 13.53 0.00 42.35 4.69
2474 2709 7.041167 TCGAAATATTCTCGGTATTTCTCGGTA 60.041 37.037 15.30 0.00 42.35 4.02
2475 2710 7.592533 CGAAATATTCTCGGTATTTCTCGGTAA 59.407 37.037 13.53 0.00 42.35 2.85
2476 2711 8.585189 AAATATTCTCGGTATTTCTCGGTAAC 57.415 34.615 0.00 0.00 28.29 2.50
2477 2712 4.376340 TTCTCGGTATTTCTCGGTAACC 57.624 45.455 0.00 0.00 0.00 2.85
2498 2733 2.742774 GTGGTAACCACGTTTACGAGT 58.257 47.619 9.53 3.30 44.95 4.18
2499 2734 2.726241 GTGGTAACCACGTTTACGAGTC 59.274 50.000 9.53 0.00 44.95 3.36
2500 2735 2.288152 TGGTAACCACGTTTACGAGTCC 60.288 50.000 9.53 5.44 43.02 3.85
2501 2736 2.328473 GTAACCACGTTTACGAGTCCC 58.672 52.381 9.53 0.00 43.02 4.46
2502 2737 0.033920 AACCACGTTTACGAGTCCCC 59.966 55.000 9.53 0.00 43.02 4.81
2503 2738 1.079612 CCACGTTTACGAGTCCCCC 60.080 63.158 9.53 0.00 43.02 5.40
2504 2739 1.538687 CCACGTTTACGAGTCCCCCT 61.539 60.000 9.53 0.00 43.02 4.79
2505 2740 0.108945 CACGTTTACGAGTCCCCCTC 60.109 60.000 9.53 0.00 43.02 4.30
2515 2750 2.640184 GAGTCCCCCTCGGTAAAAATG 58.360 52.381 0.00 0.00 0.00 2.32
2516 2751 1.100510 GTCCCCCTCGGTAAAAATGC 58.899 55.000 0.00 0.00 0.00 3.56
2517 2752 0.033894 TCCCCCTCGGTAAAAATGCC 60.034 55.000 0.00 0.00 0.00 4.40
2518 2753 0.033503 CCCCCTCGGTAAAAATGCCT 60.034 55.000 0.00 0.00 0.00 4.75
2519 2754 1.389555 CCCCTCGGTAAAAATGCCTC 58.610 55.000 0.00 0.00 0.00 4.70
2520 2755 1.340600 CCCCTCGGTAAAAATGCCTCA 60.341 52.381 0.00 0.00 0.00 3.86
2521 2756 2.654863 CCCTCGGTAAAAATGCCTCAT 58.345 47.619 0.00 0.00 0.00 2.90
2522 2757 3.023832 CCCTCGGTAAAAATGCCTCATT 58.976 45.455 0.00 0.00 35.39 2.57
2523 2758 3.066760 CCCTCGGTAAAAATGCCTCATTC 59.933 47.826 0.00 0.00 32.43 2.67
2524 2759 3.242739 CCTCGGTAAAAATGCCTCATTCG 60.243 47.826 0.00 0.00 32.43 3.34
2525 2760 2.680841 TCGGTAAAAATGCCTCATTCGG 59.319 45.455 0.00 0.00 32.43 4.30
2526 2761 2.422127 CGGTAAAAATGCCTCATTCGGT 59.578 45.455 0.00 0.00 32.43 4.69
2527 2762 3.623960 CGGTAAAAATGCCTCATTCGGTA 59.376 43.478 0.00 0.00 32.43 4.02
2528 2763 4.095185 CGGTAAAAATGCCTCATTCGGTAA 59.905 41.667 0.00 0.00 32.43 2.85
2529 2764 5.337554 GGTAAAAATGCCTCATTCGGTAAC 58.662 41.667 0.00 0.00 32.43 2.50
2530 2765 4.450082 AAAAATGCCTCATTCGGTAACC 57.550 40.909 0.00 0.00 32.43 2.85
2531 2766 2.799126 AATGCCTCATTCGGTAACCA 57.201 45.000 0.00 0.00 26.27 3.67
2532 2767 2.799126 ATGCCTCATTCGGTAACCAA 57.201 45.000 0.00 0.00 0.00 3.67
2533 2768 2.570415 TGCCTCATTCGGTAACCAAA 57.430 45.000 0.00 0.00 0.00 3.28
2534 2769 2.865079 TGCCTCATTCGGTAACCAAAA 58.135 42.857 0.00 0.00 0.00 2.44
2535 2770 2.554893 TGCCTCATTCGGTAACCAAAAC 59.445 45.455 0.00 0.00 0.00 2.43
2536 2771 2.094906 GCCTCATTCGGTAACCAAAACC 60.095 50.000 0.00 0.00 0.00 3.27
2537 2772 3.418047 CCTCATTCGGTAACCAAAACCT 58.582 45.455 0.00 0.00 34.66 3.50
2538 2773 3.824443 CCTCATTCGGTAACCAAAACCTT 59.176 43.478 0.00 0.00 34.66 3.50
2539 2774 4.320935 CCTCATTCGGTAACCAAAACCTTG 60.321 45.833 0.00 0.00 34.66 3.61
2590 2825 1.482593 CCTTGTCGGAGGTATCTTGCT 59.517 52.381 0.00 0.00 33.16 3.91
2605 2840 0.889994 TTGCTCCAATTTGCGCAGAT 59.110 45.000 11.31 9.42 33.48 2.90
2682 2917 5.579904 CACACTGACAGATCTGGATGTTAAG 59.420 44.000 26.08 10.00 34.19 1.85
2698 2978 7.106239 GGATGTTAAGAGAGGTGATTCAGAAA 58.894 38.462 0.00 0.00 0.00 2.52
2716 2996 6.406370 TCAGAAACGTTGTCTTATCATGGAT 58.594 36.000 0.00 0.00 0.00 3.41
2721 3007 5.118990 ACGTTGTCTTATCATGGATGGAAG 58.881 41.667 0.00 0.00 0.00 3.46
2725 3011 6.312141 TGTCTTATCATGGATGGAAGTTGA 57.688 37.500 0.00 0.00 0.00 3.18
2726 3012 6.720309 TGTCTTATCATGGATGGAAGTTGAA 58.280 36.000 0.00 0.00 0.00 2.69
2768 3054 1.998530 TGGCCTACCACAATCTGGG 59.001 57.895 3.32 0.00 45.78 4.45
2773 3059 3.562609 GGCCTACCACAATCTGGGTAAAA 60.563 47.826 0.00 0.00 45.78 1.52
2992 3284 3.632145 AGTGTTAAACTGTTTCCCAGCTG 59.368 43.478 9.38 6.78 45.68 4.24
3010 3302 4.153117 CAGCTGTTTCTGTGTTGGAGATAC 59.847 45.833 5.25 0.00 0.00 2.24
3016 3308 6.427853 TGTTTCTGTGTTGGAGATACATGAAG 59.572 38.462 0.00 0.00 29.67 3.02
3017 3309 5.745312 TCTGTGTTGGAGATACATGAAGT 57.255 39.130 0.00 0.00 0.00 3.01
3020 3312 5.245531 TGTGTTGGAGATACATGAAGTTCC 58.754 41.667 0.00 1.90 0.00 3.62
3022 3314 5.352569 GTGTTGGAGATACATGAAGTTCCAG 59.647 44.000 0.00 0.00 36.34 3.86
3027 3319 6.096987 TGGAGATACATGAAGTTCCAGACTAC 59.903 42.308 0.00 0.00 37.72 2.73
3030 7778 4.442375 ACATGAAGTTCCAGACTACGAG 57.558 45.455 0.00 0.00 37.72 4.18
3093 7853 3.646162 TGCAGGAACTTACCTTCTCAGAA 59.354 43.478 0.00 0.00 38.32 3.02
3169 7935 6.040166 GGACAAGTCATTGCTCCAATCATTAT 59.960 38.462 2.29 0.00 40.27 1.28
3189 7955 8.190122 TCATTATCAATATTCAACTGTGGCAAC 58.810 33.333 0.00 0.00 0.00 4.17
3195 7961 2.937469 TCAACTGTGGCAACTTGTTG 57.063 45.000 18.37 18.37 39.99 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.924511 TGACAGTTTCCTCAAAAATATCTCTT 57.075 30.769 0.00 0.00 0.00 2.85
6 7 5.591067 ACGGTTGACAGTTTCCTCAAAAATA 59.409 36.000 0.00 0.00 0.00 1.40
33 34 2.672996 GTGGCACCGGCATCAGTT 60.673 61.111 6.29 0.00 43.71 3.16
178 197 3.064545 AGCTTAAGCACATCGAAATCAGC 59.935 43.478 28.39 0.00 45.16 4.26
235 254 2.037136 CACCGCTGCTTCCTCCTTG 61.037 63.158 0.00 0.00 0.00 3.61
305 333 8.964772 CAATTAGAAACCTCTTGGATTTGAGAT 58.035 33.333 0.00 0.00 37.04 2.75
312 340 7.693969 CAAGACAATTAGAAACCTCTTGGAT 57.306 36.000 0.00 0.00 33.81 3.41
534 562 3.096092 AGGCTTGTTGTCTTCACCAAAA 58.904 40.909 0.00 0.00 0.00 2.44
576 604 2.715737 TTTTTCGTGCAATACCAGCC 57.284 45.000 0.00 0.00 0.00 4.85
664 692 3.285484 CTCCATTCCAATGTTCCTGAGG 58.715 50.000 0.00 0.00 34.60 3.86
704 732 6.151648 TCCATTCCAAGACTGATGCTTTAAAG 59.848 38.462 11.02 11.02 0.00 1.85
705 733 6.009589 TCCATTCCAAGACTGATGCTTTAAA 58.990 36.000 0.00 0.00 0.00 1.52
706 734 5.569355 TCCATTCCAAGACTGATGCTTTAA 58.431 37.500 0.00 0.00 0.00 1.52
707 735 5.178096 TCCATTCCAAGACTGATGCTTTA 57.822 39.130 0.00 0.00 0.00 1.85
708 736 4.015084 CTCCATTCCAAGACTGATGCTTT 58.985 43.478 0.00 0.00 0.00 3.51
709 737 3.009916 ACTCCATTCCAAGACTGATGCTT 59.990 43.478 0.00 0.00 0.00 3.91
710 738 2.575279 ACTCCATTCCAAGACTGATGCT 59.425 45.455 0.00 0.00 0.00 3.79
711 739 2.996631 ACTCCATTCCAAGACTGATGC 58.003 47.619 0.00 0.00 0.00 3.91
712 740 4.841422 AGAACTCCATTCCAAGACTGATG 58.159 43.478 0.00 0.00 38.16 3.07
713 741 5.013495 TCAAGAACTCCATTCCAAGACTGAT 59.987 40.000 0.00 0.00 38.16 2.90
714 742 4.347876 TCAAGAACTCCATTCCAAGACTGA 59.652 41.667 0.00 0.00 38.16 3.41
715 743 4.645535 TCAAGAACTCCATTCCAAGACTG 58.354 43.478 0.00 0.00 38.16 3.51
716 744 4.982241 TCAAGAACTCCATTCCAAGACT 57.018 40.909 0.00 0.00 38.16 3.24
717 745 6.391227 TTTTCAAGAACTCCATTCCAAGAC 57.609 37.500 0.00 0.00 38.16 3.01
718 746 5.010012 GCTTTTCAAGAACTCCATTCCAAGA 59.990 40.000 0.00 0.00 38.16 3.02
719 747 5.221303 TGCTTTTCAAGAACTCCATTCCAAG 60.221 40.000 0.00 0.00 38.16 3.61
749 777 7.540055 GTGGATCAAGAACTTATGCTTTTCAAG 59.460 37.037 0.00 0.00 0.00 3.02
750 778 7.231317 AGTGGATCAAGAACTTATGCTTTTCAA 59.769 33.333 0.00 0.00 0.00 2.69
751 779 6.716628 AGTGGATCAAGAACTTATGCTTTTCA 59.283 34.615 0.00 0.00 0.00 2.69
752 780 7.150783 AGTGGATCAAGAACTTATGCTTTTC 57.849 36.000 0.00 0.00 0.00 2.29
753 781 8.635765 TTAGTGGATCAAGAACTTATGCTTTT 57.364 30.769 0.00 0.00 0.00 2.27
754 782 8.635765 TTTAGTGGATCAAGAACTTATGCTTT 57.364 30.769 0.00 0.00 0.00 3.51
755 783 7.148171 GCTTTAGTGGATCAAGAACTTATGCTT 60.148 37.037 0.00 0.00 0.00 3.91
756 784 6.317391 GCTTTAGTGGATCAAGAACTTATGCT 59.683 38.462 0.00 0.00 0.00 3.79
757 785 6.094048 TGCTTTAGTGGATCAAGAACTTATGC 59.906 38.462 0.00 1.95 0.00 3.14
758 786 7.615582 TGCTTTAGTGGATCAAGAACTTATG 57.384 36.000 0.00 0.00 0.00 1.90
759 787 7.665559 TGTTGCTTTAGTGGATCAAGAACTTAT 59.334 33.333 0.00 0.00 0.00 1.73
760 788 6.995686 TGTTGCTTTAGTGGATCAAGAACTTA 59.004 34.615 0.00 0.00 0.00 2.24
761 789 5.827797 TGTTGCTTTAGTGGATCAAGAACTT 59.172 36.000 0.00 0.00 0.00 2.66
762 790 5.376625 TGTTGCTTTAGTGGATCAAGAACT 58.623 37.500 0.00 0.00 0.00 3.01
763 791 5.689383 TGTTGCTTTAGTGGATCAAGAAC 57.311 39.130 0.00 0.00 0.00 3.01
764 792 5.241506 CCTTGTTGCTTTAGTGGATCAAGAA 59.758 40.000 0.00 0.00 37.31 2.52
765 793 4.761739 CCTTGTTGCTTTAGTGGATCAAGA 59.238 41.667 0.00 0.00 37.31 3.02
766 794 4.761739 TCCTTGTTGCTTTAGTGGATCAAG 59.238 41.667 0.00 0.00 35.94 3.02
767 795 4.724399 TCCTTGTTGCTTTAGTGGATCAA 58.276 39.130 0.00 0.00 0.00 2.57
768 796 4.365514 TCCTTGTTGCTTTAGTGGATCA 57.634 40.909 0.00 0.00 0.00 2.92
769 797 5.705609 TTTCCTTGTTGCTTTAGTGGATC 57.294 39.130 0.00 0.00 0.00 3.36
770 798 5.774690 TCATTTCCTTGTTGCTTTAGTGGAT 59.225 36.000 0.00 0.00 0.00 3.41
771 799 5.136828 TCATTTCCTTGTTGCTTTAGTGGA 58.863 37.500 0.00 0.00 0.00 4.02
772 800 5.452078 TCATTTCCTTGTTGCTTTAGTGG 57.548 39.130 0.00 0.00 0.00 4.00
773 801 6.680810 TCATCATTTCCTTGTTGCTTTAGTG 58.319 36.000 0.00 0.00 0.00 2.74
774 802 6.899393 TCATCATTTCCTTGTTGCTTTAGT 57.101 33.333 0.00 0.00 0.00 2.24
821 852 7.513781 TCAGATCAAATGGGAGGTAATCATAGA 59.486 37.037 0.00 0.00 0.00 1.98
855 886 4.225042 GGGAAAAGGCCACAATAGGAAAAT 59.775 41.667 5.01 0.00 0.00 1.82
1005 1036 6.558771 TGCATTACATAGAAATCGGATTGG 57.441 37.500 3.59 0.00 0.00 3.16
1415 1563 8.289939 TCTTGATAGTGTACTAGGTAAACTGG 57.710 38.462 9.92 0.00 37.20 4.00
1509 1657 7.669304 TGGAAATCATGTAAATTCTCAAGGTGA 59.331 33.333 0.00 0.00 0.00 4.02
1590 1738 4.718774 ACATGGAATTCTTCTAGCTCCTGA 59.281 41.667 5.23 0.00 0.00 3.86
1614 1762 0.786435 AACCCATGCTCCCTTTCCTT 59.214 50.000 0.00 0.00 0.00 3.36
1632 1780 5.478679 TGACCCAAGTTCTTTCAGTTCAAAA 59.521 36.000 0.00 0.00 0.00 2.44
1643 1791 4.392940 CTCTGTCAATGACCCAAGTTCTT 58.607 43.478 11.24 0.00 0.00 2.52
1676 1824 7.462331 CGTGTTCAAGACCACGTATAATTAGTG 60.462 40.741 11.31 0.00 36.45 2.74
1680 1828 5.773239 CGTGTTCAAGACCACGTATAATT 57.227 39.130 11.31 0.00 36.45 1.40
1930 2165 1.488527 CGCCAAGATACGCCTTCTAC 58.511 55.000 0.00 0.00 0.00 2.59
1948 2183 2.115266 AAAAGGTGGGAGGGTGCG 59.885 61.111 0.00 0.00 0.00 5.34
2002 2237 6.091713 CCAAACTGATGCATTCCAGAAATTTC 59.908 38.462 19.28 10.33 34.65 2.17
2089 2324 2.574006 TCAGCAAGTTCTGGCATCTT 57.426 45.000 1.92 0.00 34.91 2.40
2150 2385 5.164012 CCTTGATCGACGCATATGATTTCTC 60.164 44.000 6.97 0.00 0.00 2.87
2168 2403 0.678950 CCGGCAACCAAAACCTTGAT 59.321 50.000 0.00 0.00 34.14 2.57
2169 2404 0.684805 ACCGGCAACCAAAACCTTGA 60.685 50.000 0.00 0.00 34.14 3.02
2170 2405 0.249280 GACCGGCAACCAAAACCTTG 60.249 55.000 0.00 0.00 0.00 3.61
2171 2406 1.730451 CGACCGGCAACCAAAACCTT 61.730 55.000 0.00 0.00 0.00 3.50
2172 2407 2.190841 CGACCGGCAACCAAAACCT 61.191 57.895 0.00 0.00 0.00 3.50
2173 2408 1.726533 TTCGACCGGCAACCAAAACC 61.727 55.000 0.00 0.00 0.00 3.27
2174 2409 0.100861 TTTCGACCGGCAACCAAAAC 59.899 50.000 0.00 0.00 0.00 2.43
2175 2410 1.033574 ATTTCGACCGGCAACCAAAA 58.966 45.000 0.00 0.00 0.00 2.44
2176 2411 1.033574 AATTTCGACCGGCAACCAAA 58.966 45.000 0.00 0.00 0.00 3.28
2177 2412 1.033574 AAATTTCGACCGGCAACCAA 58.966 45.000 0.00 0.00 0.00 3.67
2178 2413 1.033574 AAAATTTCGACCGGCAACCA 58.966 45.000 0.00 0.00 0.00 3.67
2179 2414 2.993449 TAAAATTTCGACCGGCAACC 57.007 45.000 0.00 0.00 0.00 3.77
2180 2415 4.149910 TCTTAAAATTTCGACCGGCAAC 57.850 40.909 0.00 0.00 0.00 4.17
2181 2416 5.379732 AATCTTAAAATTTCGACCGGCAA 57.620 34.783 0.00 0.00 0.00 4.52
2182 2417 5.379732 AAATCTTAAAATTTCGACCGGCA 57.620 34.783 0.00 0.00 0.00 5.69
2183 2418 4.796830 GGAAATCTTAAAATTTCGACCGGC 59.203 41.667 0.00 0.00 43.52 6.13
2184 2419 5.106078 TGGGAAATCTTAAAATTTCGACCGG 60.106 40.000 0.00 0.00 43.52 5.28
2185 2420 5.945155 TGGGAAATCTTAAAATTTCGACCG 58.055 37.500 7.91 0.00 43.52 4.79
2186 2421 6.756542 CCATGGGAAATCTTAAAATTTCGACC 59.243 38.462 2.85 5.66 43.52 4.79
2187 2422 7.320399 ACCATGGGAAATCTTAAAATTTCGAC 58.680 34.615 18.09 4.92 43.52 4.20
2188 2423 7.475137 ACCATGGGAAATCTTAAAATTTCGA 57.525 32.000 18.09 0.00 43.52 3.71
2189 2424 9.083080 GTAACCATGGGAAATCTTAAAATTTCG 57.917 33.333 18.09 0.00 43.52 3.46
2190 2425 9.378551 GGTAACCATGGGAAATCTTAAAATTTC 57.621 33.333 18.09 5.80 42.41 2.17
2191 2426 8.038351 CGGTAACCATGGGAAATCTTAAAATTT 58.962 33.333 18.09 0.00 0.00 1.82
2192 2427 7.179516 ACGGTAACCATGGGAAATCTTAAAATT 59.820 33.333 18.09 0.00 0.00 1.82
2193 2428 6.666113 ACGGTAACCATGGGAAATCTTAAAAT 59.334 34.615 18.09 0.00 0.00 1.82
2194 2429 6.011481 ACGGTAACCATGGGAAATCTTAAAA 58.989 36.000 18.09 0.00 0.00 1.52
2195 2430 5.416326 CACGGTAACCATGGGAAATCTTAAA 59.584 40.000 18.09 0.00 0.00 1.52
2196 2431 4.944930 CACGGTAACCATGGGAAATCTTAA 59.055 41.667 18.09 0.00 0.00 1.85
2197 2432 4.019141 ACACGGTAACCATGGGAAATCTTA 60.019 41.667 18.09 1.09 0.00 2.10
2198 2433 3.245122 ACACGGTAACCATGGGAAATCTT 60.245 43.478 18.09 2.18 0.00 2.40
2199 2434 2.307686 ACACGGTAACCATGGGAAATCT 59.692 45.455 18.09 0.00 0.00 2.40
2200 2435 2.718563 ACACGGTAACCATGGGAAATC 58.281 47.619 18.09 0.00 0.00 2.17
2201 2436 2.891191 ACACGGTAACCATGGGAAAT 57.109 45.000 18.09 1.59 0.00 2.17
2202 2437 4.304048 AATACACGGTAACCATGGGAAA 57.696 40.909 18.09 0.00 0.00 3.13
2203 2438 4.263435 GAAATACACGGTAACCATGGGAA 58.737 43.478 18.09 0.00 0.00 3.97
2204 2439 3.370739 GGAAATACACGGTAACCATGGGA 60.371 47.826 18.09 0.00 0.00 4.37
2205 2440 2.946990 GGAAATACACGGTAACCATGGG 59.053 50.000 18.09 0.00 0.00 4.00
2206 2441 2.610374 CGGAAATACACGGTAACCATGG 59.390 50.000 11.19 11.19 0.00 3.66
2207 2442 3.062909 CACGGAAATACACGGTAACCATG 59.937 47.826 0.00 0.00 0.00 3.66
2208 2443 3.264104 CACGGAAATACACGGTAACCAT 58.736 45.455 0.00 0.00 0.00 3.55
2209 2444 2.686235 CACGGAAATACACGGTAACCA 58.314 47.619 0.00 0.00 0.00 3.67
2210 2445 1.394572 GCACGGAAATACACGGTAACC 59.605 52.381 0.00 0.00 0.00 2.85
2211 2446 1.394572 GGCACGGAAATACACGGTAAC 59.605 52.381 0.00 0.00 0.00 2.50
2212 2447 1.675415 GGGCACGGAAATACACGGTAA 60.675 52.381 0.00 0.00 0.00 2.85
2213 2448 0.108233 GGGCACGGAAATACACGGTA 60.108 55.000 0.00 0.00 0.00 4.02
2214 2449 1.376295 GGGCACGGAAATACACGGT 60.376 57.895 0.00 0.00 0.00 4.83
2215 2450 2.110352 GGGGCACGGAAATACACGG 61.110 63.158 0.00 0.00 0.00 4.94
2216 2451 1.078708 AGGGGCACGGAAATACACG 60.079 57.895 0.00 0.00 0.00 4.49
2217 2452 1.087771 CGAGGGGCACGGAAATACAC 61.088 60.000 0.00 0.00 0.00 2.90
2218 2453 1.219664 CGAGGGGCACGGAAATACA 59.780 57.895 0.00 0.00 0.00 2.29
2219 2454 4.120085 CGAGGGGCACGGAAATAC 57.880 61.111 0.00 0.00 0.00 1.89
2226 2461 1.523032 GGATTTACCGAGGGGCACG 60.523 63.158 0.00 0.00 36.48 5.34
2227 2462 0.182775 ATGGATTTACCGAGGGGCAC 59.817 55.000 0.00 0.00 42.61 5.01
2228 2463 1.809133 TATGGATTTACCGAGGGGCA 58.191 50.000 0.00 0.00 42.61 5.36
2229 2464 2.711542 CATATGGATTTACCGAGGGGC 58.288 52.381 0.00 0.00 42.61 5.80
2230 2465 2.618045 GGCATATGGATTTACCGAGGGG 60.618 54.545 4.56 0.00 42.61 4.79
2231 2466 2.711542 GGCATATGGATTTACCGAGGG 58.288 52.381 4.56 0.00 42.61 4.30
2232 2467 2.028476 TCGGCATATGGATTTACCGAGG 60.028 50.000 13.71 0.00 44.14 4.63
2233 2468 3.313012 TCGGCATATGGATTTACCGAG 57.687 47.619 13.71 0.00 44.14 4.63
2234 2469 2.611971 GCTCGGCATATGGATTTACCGA 60.612 50.000 15.95 15.95 46.57 4.69
2235 2470 1.732259 GCTCGGCATATGGATTTACCG 59.268 52.381 4.56 7.79 42.61 4.02
2236 2471 2.778299 TGCTCGGCATATGGATTTACC 58.222 47.619 4.56 0.00 31.71 2.85
2237 2472 4.829064 TTTGCTCGGCATATGGATTTAC 57.171 40.909 4.56 0.00 38.76 2.01
2238 2473 7.701539 ATATTTTGCTCGGCATATGGATTTA 57.298 32.000 4.56 0.00 38.76 1.40
2239 2474 4.942761 ATTTTGCTCGGCATATGGATTT 57.057 36.364 4.56 0.00 38.76 2.17
2240 2475 6.095440 GGTATATTTTGCTCGGCATATGGATT 59.905 38.462 4.56 0.00 38.76 3.01
2241 2476 5.590259 GGTATATTTTGCTCGGCATATGGAT 59.410 40.000 4.56 0.00 38.76 3.41
2242 2477 4.941263 GGTATATTTTGCTCGGCATATGGA 59.059 41.667 4.56 0.00 38.76 3.41
2243 2478 4.699735 TGGTATATTTTGCTCGGCATATGG 59.300 41.667 4.56 0.00 38.76 2.74
2244 2479 5.878332 TGGTATATTTTGCTCGGCATATG 57.122 39.130 0.00 0.00 38.76 1.78
2245 2480 7.466746 AAATGGTATATTTTGCTCGGCATAT 57.533 32.000 0.00 0.00 38.76 1.78
2246 2481 6.892658 AAATGGTATATTTTGCTCGGCATA 57.107 33.333 0.00 0.00 38.76 3.14
2247 2482 5.789643 AAATGGTATATTTTGCTCGGCAT 57.210 34.783 0.00 0.00 38.76 4.40
2248 2483 5.590530 AAAATGGTATATTTTGCTCGGCA 57.409 34.783 0.00 0.00 36.47 5.69
2290 2525 9.846248 ACGTACTTTACTATAAATCGAGTGTTT 57.154 29.630 0.00 0.00 0.00 2.83
2292 2527 9.922305 GTACGTACTTTACTATAAATCGAGTGT 57.078 33.333 18.47 0.00 0.00 3.55
2293 2528 9.085934 CGTACGTACTTTACTATAAATCGAGTG 57.914 37.037 22.55 0.00 0.00 3.51
2294 2529 9.031360 TCGTACGTACTTTACTATAAATCGAGT 57.969 33.333 22.55 0.00 0.00 4.18
2296 2531 9.797473 CATCGTACGTACTTTACTATAAATCGA 57.203 33.333 22.55 10.35 0.00 3.59
2297 2532 9.586150 ACATCGTACGTACTTTACTATAAATCG 57.414 33.333 22.55 5.26 0.00 3.34
2306 2541 9.769509 GCATTAATTACATCGTACGTACTTTAC 57.230 33.333 22.55 0.00 0.00 2.01
2307 2542 8.967218 GGCATTAATTACATCGTACGTACTTTA 58.033 33.333 22.55 9.14 0.00 1.85
2308 2543 7.492020 TGGCATTAATTACATCGTACGTACTTT 59.508 33.333 22.55 7.71 0.00 2.66
2309 2544 6.979817 TGGCATTAATTACATCGTACGTACTT 59.020 34.615 22.55 11.03 0.00 2.24
2310 2545 6.418819 GTGGCATTAATTACATCGTACGTACT 59.581 38.462 22.55 7.25 0.00 2.73
2311 2546 6.575132 GTGGCATTAATTACATCGTACGTAC 58.425 40.000 15.90 15.90 0.00 3.67
2312 2547 5.399006 CGTGGCATTAATTACATCGTACGTA 59.601 40.000 16.05 2.34 0.00 3.57
2313 2548 4.207635 CGTGGCATTAATTACATCGTACGT 59.792 41.667 16.05 0.00 0.00 3.57
2314 2549 4.441744 TCGTGGCATTAATTACATCGTACG 59.558 41.667 9.53 9.53 0.00 3.67
2315 2550 5.688621 TCTCGTGGCATTAATTACATCGTAC 59.311 40.000 0.00 0.00 0.00 3.67
2316 2551 5.834169 TCTCGTGGCATTAATTACATCGTA 58.166 37.500 0.00 0.00 0.00 3.43
2317 2552 4.689071 TCTCGTGGCATTAATTACATCGT 58.311 39.130 0.00 0.00 0.00 3.73
2318 2553 4.745125 ACTCTCGTGGCATTAATTACATCG 59.255 41.667 0.00 0.00 0.00 3.84
2319 2554 6.422223 CAACTCTCGTGGCATTAATTACATC 58.578 40.000 0.00 0.00 0.00 3.06
2320 2555 5.296780 CCAACTCTCGTGGCATTAATTACAT 59.703 40.000 0.00 0.00 0.00 2.29
2321 2556 4.634004 CCAACTCTCGTGGCATTAATTACA 59.366 41.667 0.00 0.00 0.00 2.41
2322 2557 4.634443 ACCAACTCTCGTGGCATTAATTAC 59.366 41.667 0.00 0.00 0.00 1.89
2323 2558 4.839121 ACCAACTCTCGTGGCATTAATTA 58.161 39.130 0.00 0.00 0.00 1.40
2324 2559 3.686016 ACCAACTCTCGTGGCATTAATT 58.314 40.909 0.00 0.00 0.00 1.40
2325 2560 3.350219 ACCAACTCTCGTGGCATTAAT 57.650 42.857 0.00 0.00 0.00 1.40
2326 2561 2.851263 ACCAACTCTCGTGGCATTAA 57.149 45.000 0.00 0.00 0.00 1.40
2327 2562 2.301870 AGAACCAACTCTCGTGGCATTA 59.698 45.455 0.00 0.00 0.00 1.90
2328 2563 1.072331 AGAACCAACTCTCGTGGCATT 59.928 47.619 0.00 0.00 0.00 3.56
2329 2564 0.687354 AGAACCAACTCTCGTGGCAT 59.313 50.000 0.00 0.00 0.00 4.40
2330 2565 0.249868 CAGAACCAACTCTCGTGGCA 60.250 55.000 0.00 0.00 0.00 4.92
2331 2566 0.951040 CCAGAACCAACTCTCGTGGC 60.951 60.000 0.00 0.00 0.00 5.01
2332 2567 0.393077 ACCAGAACCAACTCTCGTGG 59.607 55.000 0.00 0.00 0.00 4.94
2333 2568 1.202533 ACACCAGAACCAACTCTCGTG 60.203 52.381 0.00 0.00 39.59 4.35
2334 2569 1.120530 ACACCAGAACCAACTCTCGT 58.879 50.000 0.00 0.00 0.00 4.18
2335 2570 1.502231 CACACCAGAACCAACTCTCG 58.498 55.000 0.00 0.00 0.00 4.04
2336 2571 1.141053 ACCACACCAGAACCAACTCTC 59.859 52.381 0.00 0.00 0.00 3.20
2337 2572 1.134098 CACCACACCAGAACCAACTCT 60.134 52.381 0.00 0.00 0.00 3.24
2338 2573 1.308998 CACCACACCAGAACCAACTC 58.691 55.000 0.00 0.00 0.00 3.01
2339 2574 0.106719 CCACCACACCAGAACCAACT 60.107 55.000 0.00 0.00 0.00 3.16
2340 2575 0.395173 ACCACCACACCAGAACCAAC 60.395 55.000 0.00 0.00 0.00 3.77
2341 2576 1.142060 CTACCACCACACCAGAACCAA 59.858 52.381 0.00 0.00 0.00 3.67
2342 2577 0.762418 CTACCACCACACCAGAACCA 59.238 55.000 0.00 0.00 0.00 3.67
2343 2578 0.605589 GCTACCACCACACCAGAACC 60.606 60.000 0.00 0.00 0.00 3.62
2344 2579 0.107831 TGCTACCACCACACCAGAAC 59.892 55.000 0.00 0.00 0.00 3.01
2345 2580 0.840617 TTGCTACCACCACACCAGAA 59.159 50.000 0.00 0.00 0.00 3.02
2346 2581 0.107831 GTTGCTACCACCACACCAGA 59.892 55.000 0.00 0.00 0.00 3.86
2347 2582 0.889186 GGTTGCTACCACCACACCAG 60.889 60.000 12.79 0.00 44.36 4.00
2348 2583 1.149627 GGTTGCTACCACCACACCA 59.850 57.895 12.79 0.00 44.36 4.17
2349 2584 4.074647 GGTTGCTACCACCACACC 57.925 61.111 12.79 0.00 44.36 4.16
2352 2587 6.894767 CAGGAACTAGGTTGCTACCACCAC 62.895 54.167 19.71 6.56 42.02 4.16
2353 2588 4.888896 CAGGAACTAGGTTGCTACCACCA 61.889 52.174 19.71 3.35 42.02 4.17
2354 2589 2.354805 CAGGAACTAGGTTGCTACCACC 60.355 54.545 19.71 13.04 42.02 4.61
2355 2590 2.302157 ACAGGAACTAGGTTGCTACCAC 59.698 50.000 19.71 5.27 42.02 4.16
2356 2591 2.616524 ACAGGAACTAGGTTGCTACCA 58.383 47.619 19.71 4.87 42.02 3.25
2357 2592 3.697619 AACAGGAACTAGGTTGCTACC 57.302 47.619 9.54 9.54 42.02 3.18
2358 2593 5.061179 TCAAAACAGGAACTAGGTTGCTAC 58.939 41.667 4.28 0.00 42.02 3.58
2359 2594 5.071250 TCTCAAAACAGGAACTAGGTTGCTA 59.929 40.000 4.28 0.00 42.02 3.49
2360 2595 4.137543 CTCAAAACAGGAACTAGGTTGCT 58.862 43.478 0.00 0.00 44.62 3.91
2361 2596 4.134563 TCTCAAAACAGGAACTAGGTTGC 58.865 43.478 0.00 0.00 36.02 4.17
2362 2597 4.757149 CCTCTCAAAACAGGAACTAGGTTG 59.243 45.833 0.00 0.00 36.02 3.77
2363 2598 4.412528 ACCTCTCAAAACAGGAACTAGGTT 59.587 41.667 0.00 0.00 36.02 3.50
2364 2599 3.974642 ACCTCTCAAAACAGGAACTAGGT 59.025 43.478 0.00 0.00 36.02 3.08
2365 2600 4.284746 AGACCTCTCAAAACAGGAACTAGG 59.715 45.833 0.00 0.00 36.02 3.02
2366 2601 5.245075 AGAGACCTCTCAAAACAGGAACTAG 59.755 44.000 5.13 0.00 45.21 2.57
2367 2602 5.011125 CAGAGACCTCTCAAAACAGGAACTA 59.989 44.000 5.13 0.00 45.21 2.24
2368 2603 3.970640 AGAGACCTCTCAAAACAGGAACT 59.029 43.478 5.13 0.00 45.21 3.01
2369 2604 4.061596 CAGAGACCTCTCAAAACAGGAAC 58.938 47.826 5.13 0.00 45.21 3.62
2370 2605 3.071602 CCAGAGACCTCTCAAAACAGGAA 59.928 47.826 5.13 0.00 45.21 3.36
2371 2606 2.634940 CCAGAGACCTCTCAAAACAGGA 59.365 50.000 5.13 0.00 45.21 3.86
2372 2607 2.370189 ACCAGAGACCTCTCAAAACAGG 59.630 50.000 5.13 0.00 45.21 4.00
2373 2608 3.556004 GGACCAGAGACCTCTCAAAACAG 60.556 52.174 5.13 0.00 45.21 3.16
2374 2609 2.368875 GGACCAGAGACCTCTCAAAACA 59.631 50.000 5.13 0.00 45.21 2.83
2375 2610 2.368875 TGGACCAGAGACCTCTCAAAAC 59.631 50.000 5.13 0.00 45.21 2.43
2376 2611 2.689658 TGGACCAGAGACCTCTCAAAA 58.310 47.619 5.13 0.00 45.21 2.44
2377 2612 2.398754 TGGACCAGAGACCTCTCAAA 57.601 50.000 5.13 0.00 45.21 2.69
2378 2613 2.398754 TTGGACCAGAGACCTCTCAA 57.601 50.000 5.13 0.00 45.21 3.02
2379 2614 2.398754 TTTGGACCAGAGACCTCTCA 57.601 50.000 5.13 0.00 45.21 3.27
2380 2615 2.569404 ACATTTGGACCAGAGACCTCTC 59.431 50.000 0.00 0.00 43.17 3.20
2381 2616 2.625639 ACATTTGGACCAGAGACCTCT 58.374 47.619 0.00 0.00 41.37 3.69
2382 2617 3.425162 AACATTTGGACCAGAGACCTC 57.575 47.619 0.00 0.00 0.00 3.85
2383 2618 3.117512 ACAAACATTTGGACCAGAGACCT 60.118 43.478 9.09 0.00 42.34 3.85
2384 2619 3.222603 ACAAACATTTGGACCAGAGACC 58.777 45.455 9.09 0.00 42.34 3.85
2385 2620 4.338118 TGAACAAACATTTGGACCAGAGAC 59.662 41.667 9.09 0.00 42.34 3.36
2386 2621 4.531854 TGAACAAACATTTGGACCAGAGA 58.468 39.130 9.09 0.00 42.34 3.10
2387 2622 4.916983 TGAACAAACATTTGGACCAGAG 57.083 40.909 9.09 0.00 42.34 3.35
2388 2623 5.362143 TGAATGAACAAACATTTGGACCAGA 59.638 36.000 9.09 0.00 42.34 3.86
2389 2624 5.463061 GTGAATGAACAAACATTTGGACCAG 59.537 40.000 9.09 0.00 42.34 4.00
2390 2625 5.128499 AGTGAATGAACAAACATTTGGACCA 59.872 36.000 9.09 0.00 42.34 4.02
2391 2626 5.600696 AGTGAATGAACAAACATTTGGACC 58.399 37.500 9.09 0.00 42.34 4.46
2392 2627 8.816640 ATAAGTGAATGAACAAACATTTGGAC 57.183 30.769 9.09 3.41 42.34 4.02
2393 2628 9.829507 AAATAAGTGAATGAACAAACATTTGGA 57.170 25.926 9.09 0.00 42.34 3.53
2394 2629 9.866936 CAAATAAGTGAATGAACAAACATTTGG 57.133 29.630 9.09 0.00 42.34 3.28
2410 2645 9.985730 AGCTGAATTTTGAATTCAAATAAGTGA 57.014 25.926 29.13 16.51 44.30 3.41
2424 2659 9.272901 CGAACGAATTTTATAGCTGAATTTTGA 57.727 29.630 0.00 0.00 0.00 2.69
2425 2660 9.272901 TCGAACGAATTTTATAGCTGAATTTTG 57.727 29.630 0.00 0.00 0.00 2.44
2426 2661 9.834628 TTCGAACGAATTTTATAGCTGAATTTT 57.165 25.926 5.53 0.00 0.00 1.82
2427 2662 9.834628 TTTCGAACGAATTTTATAGCTGAATTT 57.165 25.926 10.33 0.00 33.79 1.82
2437 2672 8.823818 ACCGAGAATATTTCGAACGAATTTTAT 58.176 29.630 16.51 4.20 40.36 1.40
2438 2673 8.188531 ACCGAGAATATTTCGAACGAATTTTA 57.811 30.769 16.51 4.41 40.36 1.52
2439 2674 7.068692 ACCGAGAATATTTCGAACGAATTTT 57.931 32.000 16.51 5.19 40.36 1.82
2440 2675 6.657836 ACCGAGAATATTTCGAACGAATTT 57.342 33.333 16.51 5.50 40.36 1.82
2441 2676 7.941795 ATACCGAGAATATTTCGAACGAATT 57.058 32.000 16.51 9.48 40.36 2.17
2442 2677 7.941795 AATACCGAGAATATTTCGAACGAAT 57.058 32.000 16.51 0.00 40.36 3.34
2443 2678 7.703621 AGAAATACCGAGAATATTTCGAACGAA 59.296 33.333 16.51 5.53 46.64 3.85
2444 2679 7.198390 AGAAATACCGAGAATATTTCGAACGA 58.802 34.615 16.51 0.00 46.64 3.85
2445 2680 7.390918 AGAAATACCGAGAATATTTCGAACG 57.609 36.000 16.51 0.00 46.64 3.95
2446 2681 7.358187 CCGAGAAATACCGAGAATATTTCGAAC 60.358 40.741 16.51 0.00 46.64 3.95
2447 2682 6.639686 CCGAGAAATACCGAGAATATTTCGAA 59.360 38.462 16.51 0.00 46.64 3.71
2448 2683 6.147581 CCGAGAAATACCGAGAATATTTCGA 58.852 40.000 16.51 0.00 46.64 3.71
2449 2684 5.919141 ACCGAGAAATACCGAGAATATTTCG 59.081 40.000 10.33 10.96 46.64 3.46
2450 2685 8.697960 GTTACCGAGAAATACCGAGAATATTTC 58.302 37.037 8.71 8.71 44.27 2.17
2451 2686 7.654923 GGTTACCGAGAAATACCGAGAATATTT 59.345 37.037 0.00 0.00 35.43 1.40
2452 2687 7.150640 GGTTACCGAGAAATACCGAGAATATT 58.849 38.462 0.00 0.00 0.00 1.28
2453 2688 6.685657 GGTTACCGAGAAATACCGAGAATAT 58.314 40.000 0.00 0.00 0.00 1.28
2454 2689 6.076981 GGTTACCGAGAAATACCGAGAATA 57.923 41.667 0.00 0.00 0.00 1.75
2455 2690 4.941657 GGTTACCGAGAAATACCGAGAAT 58.058 43.478 0.00 0.00 0.00 2.40
2456 2691 4.376340 GGTTACCGAGAAATACCGAGAA 57.624 45.455 0.00 0.00 0.00 2.87
2479 2714 2.288152 GGACTCGTAAACGTGGTTACCA 60.288 50.000 0.00 0.00 40.80 3.25
2480 2715 2.328473 GGACTCGTAAACGTGGTTACC 58.672 52.381 9.11 0.00 40.80 2.85
2481 2716 2.328473 GGGACTCGTAAACGTGGTTAC 58.672 52.381 9.11 0.00 40.80 2.50
2482 2717 1.272212 GGGGACTCGTAAACGTGGTTA 59.728 52.381 9.11 0.00 40.80 2.85
2483 2718 0.033920 GGGGACTCGTAAACGTGGTT 59.966 55.000 9.11 0.00 40.80 3.67
2484 2719 1.667722 GGGGACTCGTAAACGTGGT 59.332 57.895 9.11 6.57 40.80 4.16
2485 2720 1.079612 GGGGGACTCGTAAACGTGG 60.080 63.158 9.11 3.77 40.80 4.94
2486 2721 0.108945 GAGGGGGACTCGTAAACGTG 60.109 60.000 2.02 2.69 40.80 4.49
2487 2722 2.270959 GAGGGGGACTCGTAAACGT 58.729 57.895 2.02 0.00 40.80 3.99
2495 2730 2.640184 CATTTTTACCGAGGGGGACTC 58.360 52.381 0.00 0.00 43.02 3.36
2496 2731 1.340697 GCATTTTTACCGAGGGGGACT 60.341 52.381 0.00 0.00 39.97 3.85
2497 2732 1.100510 GCATTTTTACCGAGGGGGAC 58.899 55.000 0.00 0.00 39.97 4.46
2498 2733 0.033894 GGCATTTTTACCGAGGGGGA 60.034 55.000 0.00 0.00 39.97 4.81
2499 2734 0.033503 AGGCATTTTTACCGAGGGGG 60.034 55.000 0.00 0.00 43.62 5.40
2500 2735 1.340600 TGAGGCATTTTTACCGAGGGG 60.341 52.381 0.00 0.00 40.11 4.79
2501 2736 2.122783 TGAGGCATTTTTACCGAGGG 57.877 50.000 0.00 0.00 0.00 4.30
2502 2737 3.242739 CGAATGAGGCATTTTTACCGAGG 60.243 47.826 0.00 0.00 33.90 4.63
2503 2738 3.242739 CCGAATGAGGCATTTTTACCGAG 60.243 47.826 0.00 0.00 33.90 4.63
2504 2739 2.680841 CCGAATGAGGCATTTTTACCGA 59.319 45.455 0.00 0.00 33.90 4.69
2505 2740 2.422127 ACCGAATGAGGCATTTTTACCG 59.578 45.455 0.00 0.00 33.90 4.02
2506 2741 5.337554 GTTACCGAATGAGGCATTTTTACC 58.662 41.667 0.00 0.00 33.90 2.85
2507 2742 5.106078 TGGTTACCGAATGAGGCATTTTTAC 60.106 40.000 0.00 0.00 33.90 2.01
2508 2743 5.010933 TGGTTACCGAATGAGGCATTTTTA 58.989 37.500 0.00 0.00 33.90 1.52
2509 2744 3.829601 TGGTTACCGAATGAGGCATTTTT 59.170 39.130 0.00 0.00 33.90 1.94
2510 2745 3.426615 TGGTTACCGAATGAGGCATTTT 58.573 40.909 0.00 0.00 33.90 1.82
2511 2746 3.080300 TGGTTACCGAATGAGGCATTT 57.920 42.857 0.00 0.00 33.90 2.32
2512 2747 2.799126 TGGTTACCGAATGAGGCATT 57.201 45.000 0.00 0.00 36.72 3.56
2513 2748 2.799126 TTGGTTACCGAATGAGGCAT 57.201 45.000 0.00 0.00 33.69 4.40
2514 2749 2.554893 GTTTTGGTTACCGAATGAGGCA 59.445 45.455 4.72 0.00 33.69 4.75
2515 2750 2.094906 GGTTTTGGTTACCGAATGAGGC 60.095 50.000 4.72 0.00 33.69 4.70
2516 2751 3.418047 AGGTTTTGGTTACCGAATGAGG 58.582 45.455 4.72 0.00 40.69 3.86
2517 2752 4.794169 CAAGGTTTTGGTTACCGAATGAG 58.206 43.478 4.72 0.00 40.69 2.90
2518 2753 4.839668 CAAGGTTTTGGTTACCGAATGA 57.160 40.909 4.72 0.00 40.69 2.57
2530 2765 1.685302 CAATCGACGCCAAGGTTTTG 58.315 50.000 0.00 0.00 0.00 2.44
2531 2766 0.039527 GCAATCGACGCCAAGGTTTT 60.040 50.000 0.00 0.00 0.00 2.43
2532 2767 1.579429 GCAATCGACGCCAAGGTTT 59.421 52.632 0.00 0.00 0.00 3.27
2533 2768 3.263941 GCAATCGACGCCAAGGTT 58.736 55.556 0.00 0.00 0.00 3.50
2540 2775 2.715624 GATTGGGGCAATCGACGC 59.284 61.111 0.00 0.00 40.33 5.19
2590 2825 1.809547 TCGAAATCTGCGCAAATTGGA 59.190 42.857 10.21 7.97 0.00 3.53
2605 2840 3.015516 GGCACCCAGAAACTCGAAA 57.984 52.632 0.00 0.00 0.00 3.46
2682 2917 4.058817 ACAACGTTTCTGAATCACCTCTC 58.941 43.478 0.00 0.00 0.00 3.20
2698 2978 4.753516 TCCATCCATGATAAGACAACGT 57.246 40.909 0.00 0.00 0.00 3.99
2716 2996 4.447138 ACCCACTAACATTCAACTTCCA 57.553 40.909 0.00 0.00 0.00 3.53
2721 3007 3.064820 CGCCATACCCACTAACATTCAAC 59.935 47.826 0.00 0.00 0.00 3.18
2725 3011 1.562475 ACCGCCATACCCACTAACATT 59.438 47.619 0.00 0.00 0.00 2.71
2726 3012 1.134220 CACCGCCATACCCACTAACAT 60.134 52.381 0.00 0.00 0.00 2.71
2992 3284 6.428159 ACTTCATGTATCTCCAACACAGAAAC 59.572 38.462 0.00 0.00 0.00 2.78
3010 3302 4.442375 ACTCGTAGTCTGGAACTTCATG 57.558 45.455 0.00 0.00 39.55 3.07
3016 3308 4.197750 TCCTCATACTCGTAGTCTGGAAC 58.802 47.826 0.00 0.00 0.00 3.62
3017 3309 4.498894 TCCTCATACTCGTAGTCTGGAA 57.501 45.455 0.00 0.00 0.00 3.53
3020 3312 5.066634 ACACATTCCTCATACTCGTAGTCTG 59.933 44.000 0.00 0.00 0.00 3.51
3022 3314 5.502153 ACACATTCCTCATACTCGTAGTC 57.498 43.478 0.00 0.00 0.00 2.59
3027 3319 5.049828 TGCATTACACATTCCTCATACTCG 58.950 41.667 0.00 0.00 0.00 4.18
3030 7778 6.238484 GGAACTGCATTACACATTCCTCATAC 60.238 42.308 0.00 0.00 34.11 2.39
3093 7853 1.710809 ACAAGAACCAGGCCCTTACAT 59.289 47.619 0.00 0.00 0.00 2.29
3169 7935 5.301551 ACAAGTTGCCACAGTTGAATATTGA 59.698 36.000 1.81 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.