Multiple sequence alignment - TraesCS5D01G539800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G539800 chr5D 100.000 4086 0 0 1 4086 551087865 551083780 0.000000e+00 7546.0
1 TraesCS5D01G539800 chr5D 72.316 1239 244 62 1264 2458 552051620 552050437 3.090000e-76 296.0
2 TraesCS5D01G539800 chr5D 79.775 356 60 10 2071 2423 552457594 552457248 8.770000e-62 248.0
3 TraesCS5D01G539800 chr5D 83.264 239 35 5 2189 2424 537216911 537217147 8.900000e-52 215.0
4 TraesCS5D01G539800 chr5D 78.198 344 69 5 2087 2430 543507961 543507624 8.900000e-52 215.0
5 TraesCS5D01G539800 chr5D 76.504 349 74 6 2083 2430 551114950 551115291 2.510000e-42 183.0
6 TraesCS5D01G539800 chr5D 77.477 333 56 10 1266 1588 551119877 551120200 9.020000e-42 182.0
7 TraesCS5D01G539800 chr5D 75.000 388 73 14 2087 2459 551754599 551754977 1.520000e-34 158.0
8 TraesCS5D01G539800 chr5D 89.423 104 5 2 601 698 437691931 437692034 4.290000e-25 126.0
9 TraesCS5D01G539800 chr5D 86.916 107 14 0 1264 1370 551754446 551754552 1.990000e-23 121.0
10 TraesCS5D01G539800 chr5D 97.059 68 2 0 598 665 561500903 561500970 9.280000e-22 115.0
11 TraesCS5D01G539800 chr5D 77.841 176 37 2 1265 1439 551051768 551051942 1.550000e-19 108.0
12 TraesCS5D01G539800 chr5D 77.419 186 38 3 1263 1446 551744440 551744623 1.550000e-19 108.0
13 TraesCS5D01G539800 chr5D 85.185 108 8 4 601 701 55622870 55622764 2.010000e-18 104.0
14 TraesCS5D01G539800 chr5D 74.409 254 54 8 1338 1590 552352794 552352551 9.350000e-17 99.0
15 TraesCS5D01G539800 chr5D 81.890 127 4 8 628 736 42069932 42069807 5.630000e-14 89.8
16 TraesCS5D01G539800 chr5B 94.387 2334 112 9 971 3296 703502347 703500025 0.000000e+00 3567.0
17 TraesCS5D01G539800 chr5B 93.895 1720 84 12 951 2649 699392064 699390345 0.000000e+00 2575.0
18 TraesCS5D01G539800 chr5B 88.000 375 25 11 2660 3030 699390303 699389945 3.770000e-115 425.0
19 TraesCS5D01G539800 chr5B 78.904 365 65 9 2088 2450 685444526 685444880 1.900000e-58 237.0
20 TraesCS5D01G539800 chr5B 78.348 351 70 5 2080 2430 685500301 685500645 5.320000e-54 222.0
21 TraesCS5D01G539800 chr5B 87.349 166 15 4 773 937 699392407 699392247 6.970000e-43 185.0
22 TraesCS5D01G539800 chr5B 77.246 334 55 12 1266 1588 699415132 699415455 4.200000e-40 176.0
23 TraesCS5D01G539800 chr5B 85.629 167 17 4 773 937 703502687 703502526 7.020000e-38 169.0
24 TraesCS5D01G539800 chr4A 92.327 1564 72 9 2322 3880 616866460 616867980 0.000000e+00 2180.0
25 TraesCS5D01G539800 chr4A 96.480 625 19 2 1703 2324 616865754 616866378 0.000000e+00 1029.0
26 TraesCS5D01G539800 chr4A 93.077 650 23 8 959 1603 616865076 616865708 0.000000e+00 931.0
27 TraesCS5D01G539800 chr4A 72.190 1201 250 59 1253 2423 616618694 616617548 1.440000e-74 291.0
28 TraesCS5D01G539800 chr4A 80.274 365 62 7 2087 2449 632940133 632940489 2.420000e-67 267.0
29 TraesCS5D01G539800 chr4A 75.228 549 98 22 1922 2458 616237679 616237157 4.110000e-55 226.0
30 TraesCS5D01G539800 chr4A 78.488 344 68 5 2087 2430 616875964 616875627 1.910000e-53 220.0
31 TraesCS5D01G539800 chr4A 78.810 269 52 4 1264 1531 616238363 616238099 4.200000e-40 176.0
32 TraesCS5D01G539800 chr4A 83.186 113 10 4 628 734 646262603 646262494 1.210000e-15 95.3
33 TraesCS5D01G539800 chr4A 97.826 46 1 0 1633 1678 616865713 616865758 3.390000e-11 80.5
34 TraesCS5D01G539800 chr2D 92.916 607 34 5 1 601 1940802 1940199 0.000000e+00 874.0
35 TraesCS5D01G539800 chr2D 92.916 607 32 6 1 601 558292585 558291984 0.000000e+00 872.0
36 TraesCS5D01G539800 chr2D 90.000 70 5 2 669 736 600309711 600309642 5.630000e-14 89.8
37 TraesCS5D01G539800 chr1D 92.270 608 36 7 1 601 484143261 484143864 0.000000e+00 852.0
38 TraesCS5D01G539800 chr1D 83.246 191 29 3 1257 1446 22968932 22968744 5.430000e-39 172.0
39 TraesCS5D01G539800 chr1D 87.037 108 6 3 601 701 418556091 418555985 9.280000e-22 115.0
40 TraesCS5D01G539800 chr6D 92.257 607 36 9 1 601 455745737 455746338 0.000000e+00 850.0
41 TraesCS5D01G539800 chr6D 88.073 109 2 3 601 698 23245441 23245549 7.170000e-23 119.0
42 TraesCS5D01G539800 chr6D 86.607 112 6 5 599 702 83142609 83142719 9.280000e-22 115.0
43 TraesCS5D01G539800 chr7A 91.993 612 31 12 1 601 6305894 6306498 0.000000e+00 843.0
44 TraesCS5D01G539800 chr7A 91.118 608 43 7 2 601 675910856 675911460 0.000000e+00 813.0
45 TraesCS5D01G539800 chr7A 80.488 205 37 3 1265 1467 23197674 23197877 1.970000e-33 154.0
46 TraesCS5D01G539800 chr2A 92.231 605 31 8 2 601 507392479 507391886 0.000000e+00 843.0
47 TraesCS5D01G539800 chr7D 92.517 588 35 8 19 601 78173700 78174283 0.000000e+00 833.0
48 TraesCS5D01G539800 chr7D 86.400 125 6 2 601 714 63805276 63805152 4.290000e-25 126.0
49 TraesCS5D01G539800 chr1A 91.283 608 40 7 2 601 535423647 535424249 0.000000e+00 817.0
50 TraesCS5D01G539800 chr1A 76.877 333 58 9 1266 1588 569656863 569657186 1.950000e-38 171.0
51 TraesCS5D01G539800 chr4B 93.133 233 16 0 3471 3703 581070700 581070932 3.910000e-90 342.0
52 TraesCS5D01G539800 chr4B 75.969 129 29 2 1272 1399 106060277 106060150 9.480000e-07 65.8
53 TraesCS5D01G539800 chr1B 80.508 354 48 11 2089 2430 39516923 39516579 6.780000e-63 252.0
54 TraesCS5D01G539800 chr1B 79.911 224 40 4 1221 1440 39517735 39517513 4.230000e-35 159.0
55 TraesCS5D01G539800 chr1B 73.211 489 95 26 1260 1727 115748999 115749472 1.180000e-30 145.0
56 TraesCS5D01G539800 chr3B 91.919 99 6 1 602 698 41484777 41484679 1.980000e-28 137.0
57 TraesCS5D01G539800 chr3B 93.421 76 4 1 627 701 794538241 794538166 1.200000e-20 111.0
58 TraesCS5D01G539800 chr3D 97.143 70 2 0 598 667 544341188 544341119 7.170000e-23 119.0
59 TraesCS5D01G539800 chr7B 92.308 39 3 0 1548 1586 1251946 1251984 5.710000e-04 56.5
60 TraesCS5D01G539800 chr3A 100.000 28 0 0 687 714 726349882 726349909 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G539800 chr5D 551083780 551087865 4085 True 7546.000000 7546 100.0000 1 4086 1 chr5D.!!$R4 4085
1 TraesCS5D01G539800 chr5D 552050437 552051620 1183 True 296.000000 296 72.3160 1264 2458 1 chr5D.!!$R5 1194
2 TraesCS5D01G539800 chr5B 703500025 703502687 2662 True 1868.000000 3567 90.0080 773 3296 2 chr5B.!!$R2 2523
3 TraesCS5D01G539800 chr5B 699389945 699392407 2462 True 1061.666667 2575 89.7480 773 3030 3 chr5B.!!$R1 2257
4 TraesCS5D01G539800 chr4A 616865076 616867980 2904 False 1055.125000 2180 94.9275 959 3880 4 chr4A.!!$F2 2921
5 TraesCS5D01G539800 chr4A 616617548 616618694 1146 True 291.000000 291 72.1900 1253 2423 1 chr4A.!!$R1 1170
6 TraesCS5D01G539800 chr4A 616237157 616238363 1206 True 201.000000 226 77.0190 1264 2458 2 chr4A.!!$R4 1194
7 TraesCS5D01G539800 chr2D 1940199 1940802 603 True 874.000000 874 92.9160 1 601 1 chr2D.!!$R1 600
8 TraesCS5D01G539800 chr2D 558291984 558292585 601 True 872.000000 872 92.9160 1 601 1 chr2D.!!$R2 600
9 TraesCS5D01G539800 chr1D 484143261 484143864 603 False 852.000000 852 92.2700 1 601 1 chr1D.!!$F1 600
10 TraesCS5D01G539800 chr6D 455745737 455746338 601 False 850.000000 850 92.2570 1 601 1 chr6D.!!$F3 600
11 TraesCS5D01G539800 chr7A 6305894 6306498 604 False 843.000000 843 91.9930 1 601 1 chr7A.!!$F1 600
12 TraesCS5D01G539800 chr7A 675910856 675911460 604 False 813.000000 813 91.1180 2 601 1 chr7A.!!$F3 599
13 TraesCS5D01G539800 chr2A 507391886 507392479 593 True 843.000000 843 92.2310 2 601 1 chr2A.!!$R1 599
14 TraesCS5D01G539800 chr7D 78173700 78174283 583 False 833.000000 833 92.5170 19 601 1 chr7D.!!$F1 582
15 TraesCS5D01G539800 chr1A 535423647 535424249 602 False 817.000000 817 91.2830 2 601 1 chr1A.!!$F1 599
16 TraesCS5D01G539800 chr1B 39516579 39517735 1156 True 205.500000 252 80.2095 1221 2430 2 chr1B.!!$R1 1209

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
571 589 0.035439 AGGCGGTCAAAATCGGATGT 60.035 50.0 0.00 0.0 0.00 3.06 F
668 686 0.036306 AACCAGGACTAAAGGGCACG 59.964 55.0 0.00 0.0 0.00 5.34 F
719 737 0.042100 GCTTTAGCCGCTCGTAATGC 60.042 55.0 0.00 0.0 34.31 3.56 F
729 747 0.108329 CTCGTAATGCAACCGGGACT 60.108 55.0 6.32 0.0 0.00 3.85 F
736 754 0.687920 TGCAACCGGGACTAATGTGA 59.312 50.0 6.32 0.0 0.00 3.58 F
827 845 0.816825 GGGCTCATGATGCGTCACAT 60.817 55.0 11.65 0.0 43.54 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1915 2234 1.929494 AGGACAGGGGGCATTATTTCA 59.071 47.619 0.00 0.0 0.00 2.69 R
2222 2544 5.683876 TTCTGAATAGGGAGAAGGTTCTG 57.316 43.478 0.00 0.0 37.73 3.02 R
2819 3297 6.842437 TTGCACCAAACCAGCTATTAATAA 57.158 33.333 0.00 0.0 0.00 1.40 R
2897 3375 0.250727 ACGCATGCCACTTAACACCT 60.251 50.000 13.15 0.0 0.00 4.00 R
3072 3554 1.816224 GAAGAGGCGGCAAACCAAATA 59.184 47.619 13.08 0.0 34.57 1.40 R
3099 3581 3.397482 CCTCTAGTGTGAGGCAATATGC 58.603 50.000 0.00 0.0 45.84 3.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 8.618240 TTTACCTCTTAATCTCTAATCACCCA 57.382 34.615 0.00 0.00 0.00 4.51
215 217 4.869861 GCACTTGTTGTTTTCCTGACAATT 59.130 37.500 0.00 0.00 39.03 2.32
220 222 8.257306 ACTTGTTGTTTTCCTGACAATTGTAAT 58.743 29.630 11.95 0.00 39.03 1.89
374 388 8.212317 ACCAGATTTGACCAAAATTCAAAAAG 57.788 30.769 1.90 0.00 44.14 2.27
476 492 8.885494 TTGACCAGATTTAACCAAAATTCAAG 57.115 30.769 0.00 0.00 37.93 3.02
571 589 0.035439 AGGCGGTCAAAATCGGATGT 60.035 50.000 0.00 0.00 0.00 3.06
601 619 9.502145 TTTTCGTGCTGAACATTTTGATATATC 57.498 29.630 5.73 5.73 35.97 1.63
602 620 8.437360 TTCGTGCTGAACATTTTGATATATCT 57.563 30.769 13.79 0.00 0.00 1.98
603 621 8.076714 TCGTGCTGAACATTTTGATATATCTC 57.923 34.615 13.79 2.17 0.00 2.75
604 622 7.710475 TCGTGCTGAACATTTTGATATATCTCA 59.290 33.333 13.79 6.39 0.00 3.27
605 623 8.337532 CGTGCTGAACATTTTGATATATCTCAA 58.662 33.333 13.79 6.90 33.42 3.02
608 626 9.455847 GCTGAACATTTTGATATATCTCAAACC 57.544 33.333 14.02 4.80 43.03 3.27
609 627 9.655769 CTGAACATTTTGATATATCTCAAACCG 57.344 33.333 14.02 11.00 43.03 4.44
610 628 8.620416 TGAACATTTTGATATATCTCAAACCGG 58.380 33.333 14.02 0.00 43.03 5.28
611 629 7.510549 ACATTTTGATATATCTCAAACCGGG 57.489 36.000 14.02 7.98 43.03 5.73
612 630 7.287061 ACATTTTGATATATCTCAAACCGGGA 58.713 34.615 14.02 2.58 43.03 5.14
613 631 7.228706 ACATTTTGATATATCTCAAACCGGGAC 59.771 37.037 14.02 0.00 43.03 4.46
614 632 6.494666 TTTGATATATCTCAAACCGGGACT 57.505 37.500 13.79 0.00 39.55 3.85
615 633 7.606135 TTTGATATATCTCAAACCGGGACTA 57.394 36.000 13.79 0.00 39.55 2.59
616 634 7.606135 TTGATATATCTCAAACCGGGACTAA 57.394 36.000 13.79 0.00 32.35 2.24
617 635 7.606135 TGATATATCTCAAACCGGGACTAAA 57.394 36.000 13.79 0.00 0.00 1.85
618 636 7.667557 TGATATATCTCAAACCGGGACTAAAG 58.332 38.462 13.79 0.00 0.00 1.85
619 637 3.629142 ATCTCAAACCGGGACTAAAGG 57.371 47.619 6.32 0.00 0.00 3.11
620 638 2.332117 TCTCAAACCGGGACTAAAGGT 58.668 47.619 6.32 0.00 40.50 3.50
621 639 2.301009 TCTCAAACCGGGACTAAAGGTC 59.699 50.000 6.32 0.00 43.79 3.85
622 640 2.302157 CTCAAACCGGGACTAAAGGTCT 59.698 50.000 6.32 0.00 43.97 3.85
623 641 3.509442 TCAAACCGGGACTAAAGGTCTA 58.491 45.455 6.32 0.00 43.97 2.59
624 642 3.903090 TCAAACCGGGACTAAAGGTCTAA 59.097 43.478 6.32 0.00 43.97 2.10
625 643 4.533311 TCAAACCGGGACTAAAGGTCTAAT 59.467 41.667 6.32 0.00 43.97 1.73
626 644 5.013391 TCAAACCGGGACTAAAGGTCTAATT 59.987 40.000 6.32 0.00 43.97 1.40
627 645 5.509832 AACCGGGACTAAAGGTCTAATTT 57.490 39.130 6.32 0.00 43.97 1.82
628 646 5.509832 ACCGGGACTAAAGGTCTAATTTT 57.490 39.130 6.32 0.00 43.97 1.82
629 647 5.884322 ACCGGGACTAAAGGTCTAATTTTT 58.116 37.500 6.32 0.00 43.97 1.94
630 648 7.019656 ACCGGGACTAAAGGTCTAATTTTTA 57.980 36.000 6.32 0.00 43.97 1.52
631 649 7.108194 ACCGGGACTAAAGGTCTAATTTTTAG 58.892 38.462 6.32 5.44 43.97 1.85
632 650 7.108194 CCGGGACTAAAGGTCTAATTTTTAGT 58.892 38.462 10.56 10.56 45.37 2.24
637 655 7.108194 ACTAAAGGTCTAATTTTTAGTCCCGG 58.892 38.462 0.00 0.00 41.36 5.73
638 656 5.509832 AAGGTCTAATTTTTAGTCCCGGT 57.490 39.130 0.00 0.00 0.00 5.28
639 657 5.509832 AGGTCTAATTTTTAGTCCCGGTT 57.490 39.130 0.00 0.00 0.00 4.44
640 658 5.884322 AGGTCTAATTTTTAGTCCCGGTTT 58.116 37.500 0.00 0.00 0.00 3.27
641 659 5.708697 AGGTCTAATTTTTAGTCCCGGTTTG 59.291 40.000 0.00 0.00 0.00 2.93
642 660 5.706833 GGTCTAATTTTTAGTCCCGGTTTGA 59.293 40.000 0.00 0.00 0.00 2.69
643 661 6.128090 GGTCTAATTTTTAGTCCCGGTTTGAG 60.128 42.308 0.00 0.00 0.00 3.02
644 662 6.652062 GTCTAATTTTTAGTCCCGGTTTGAGA 59.348 38.462 0.00 0.00 0.00 3.27
645 663 5.700722 AATTTTTAGTCCCGGTTTGAGAC 57.299 39.130 0.00 0.00 0.00 3.36
646 664 3.842007 TTTTAGTCCCGGTTTGAGACA 57.158 42.857 9.96 0.00 32.82 3.41
647 665 2.825861 TTAGTCCCGGTTTGAGACAC 57.174 50.000 9.96 0.00 32.82 3.67
648 666 0.599558 TAGTCCCGGTTTGAGACACG 59.400 55.000 9.96 0.00 32.82 4.49
649 667 1.111116 AGTCCCGGTTTGAGACACGA 61.111 55.000 9.96 0.00 32.82 4.35
650 668 0.249573 GTCCCGGTTTGAGACACGAA 60.250 55.000 0.00 0.00 0.00 3.85
651 669 0.249573 TCCCGGTTTGAGACACGAAC 60.250 55.000 0.00 0.00 40.95 3.95
656 674 2.234300 GTTTGAGACACGAACCAGGA 57.766 50.000 0.00 0.00 37.02 3.86
657 675 1.865340 GTTTGAGACACGAACCAGGAC 59.135 52.381 0.00 0.00 37.02 3.85
658 676 1.410004 TTGAGACACGAACCAGGACT 58.590 50.000 0.00 0.00 0.00 3.85
659 677 2.281539 TGAGACACGAACCAGGACTA 57.718 50.000 0.00 0.00 0.00 2.59
660 678 2.589720 TGAGACACGAACCAGGACTAA 58.410 47.619 0.00 0.00 0.00 2.24
661 679 2.960384 TGAGACACGAACCAGGACTAAA 59.040 45.455 0.00 0.00 0.00 1.85
662 680 3.005472 TGAGACACGAACCAGGACTAAAG 59.995 47.826 0.00 0.00 0.00 1.85
663 681 2.299297 AGACACGAACCAGGACTAAAGG 59.701 50.000 0.00 0.00 0.00 3.11
664 682 1.346722 ACACGAACCAGGACTAAAGGG 59.653 52.381 0.00 0.00 0.00 3.95
665 683 0.323957 ACGAACCAGGACTAAAGGGC 59.676 55.000 0.00 0.00 0.00 5.19
666 684 0.323629 CGAACCAGGACTAAAGGGCA 59.676 55.000 0.00 0.00 0.00 5.36
667 685 1.822506 GAACCAGGACTAAAGGGCAC 58.177 55.000 0.00 0.00 0.00 5.01
668 686 0.036306 AACCAGGACTAAAGGGCACG 59.964 55.000 0.00 0.00 0.00 5.34
669 687 1.125711 ACCAGGACTAAAGGGCACGT 61.126 55.000 0.00 0.00 0.00 4.49
670 688 0.391263 CCAGGACTAAAGGGCACGTC 60.391 60.000 0.00 0.00 0.00 4.34
671 689 0.391263 CAGGACTAAAGGGCACGTCC 60.391 60.000 2.74 2.74 44.84 4.79
683 701 2.908940 ACGTCCCGGTTCGTGTCT 60.909 61.111 17.86 0.00 38.85 3.41
684 702 2.126580 CGTCCCGGTTCGTGTCTC 60.127 66.667 0.00 0.00 0.00 3.36
685 703 2.911484 CGTCCCGGTTCGTGTCTCA 61.911 63.158 0.00 0.00 0.00 3.27
686 704 1.364901 GTCCCGGTTCGTGTCTCAA 59.635 57.895 0.00 0.00 0.00 3.02
687 705 0.249573 GTCCCGGTTCGTGTCTCAAA 60.250 55.000 0.00 0.00 0.00 2.69
688 706 0.249573 TCCCGGTTCGTGTCTCAAAC 60.250 55.000 0.00 0.00 0.00 2.93
689 707 1.226030 CCCGGTTCGTGTCTCAAACC 61.226 60.000 0.00 0.00 39.25 3.27
691 709 2.231820 GGTTCGTGTCTCAAACCGG 58.768 57.895 0.00 0.00 33.68 5.28
692 710 1.226030 GGTTCGTGTCTCAAACCGGG 61.226 60.000 6.32 0.00 33.68 5.73
693 711 0.249573 GTTCGTGTCTCAAACCGGGA 60.250 55.000 6.32 0.00 0.00 5.14
694 712 0.249573 TTCGTGTCTCAAACCGGGAC 60.250 55.000 6.32 3.26 0.00 4.46
695 713 1.111116 TCGTGTCTCAAACCGGGACT 61.111 55.000 6.32 0.00 0.00 3.85
696 714 0.599558 CGTGTCTCAAACCGGGACTA 59.400 55.000 6.32 0.00 0.00 2.59
697 715 1.000060 CGTGTCTCAAACCGGGACTAA 60.000 52.381 6.32 0.00 0.00 2.24
698 716 2.353406 CGTGTCTCAAACCGGGACTAAT 60.353 50.000 6.32 0.00 0.00 1.73
699 717 3.000727 GTGTCTCAAACCGGGACTAATG 58.999 50.000 6.32 0.00 0.00 1.90
700 718 2.027561 TGTCTCAAACCGGGACTAATGG 60.028 50.000 6.32 0.00 0.00 3.16
701 719 1.065709 TCTCAAACCGGGACTAATGGC 60.066 52.381 6.32 0.00 0.00 4.40
702 720 0.988832 TCAAACCGGGACTAATGGCT 59.011 50.000 6.32 0.00 0.00 4.75
703 721 1.353022 TCAAACCGGGACTAATGGCTT 59.647 47.619 6.32 0.00 0.00 4.35
704 722 2.167662 CAAACCGGGACTAATGGCTTT 58.832 47.619 6.32 0.00 0.00 3.51
705 723 3.009253 TCAAACCGGGACTAATGGCTTTA 59.991 43.478 6.32 0.00 0.00 1.85
706 724 3.277142 AACCGGGACTAATGGCTTTAG 57.723 47.619 16.18 16.18 42.62 1.85
707 725 1.134189 ACCGGGACTAATGGCTTTAGC 60.134 52.381 17.34 11.25 40.94 3.09
719 737 0.042100 GCTTTAGCCGCTCGTAATGC 60.042 55.000 0.00 0.00 34.31 3.56
720 738 1.286501 CTTTAGCCGCTCGTAATGCA 58.713 50.000 0.00 0.00 0.00 3.96
721 739 1.663643 CTTTAGCCGCTCGTAATGCAA 59.336 47.619 0.00 0.00 0.00 4.08
722 740 1.003851 TTAGCCGCTCGTAATGCAAC 58.996 50.000 0.00 0.00 0.00 4.17
723 741 0.808453 TAGCCGCTCGTAATGCAACC 60.808 55.000 0.00 0.00 0.00 3.77
724 742 2.701006 CCGCTCGTAATGCAACCG 59.299 61.111 0.00 0.00 0.00 4.44
725 743 2.701006 CGCTCGTAATGCAACCGG 59.299 61.111 0.00 0.00 0.00 5.28
726 744 2.808958 CGCTCGTAATGCAACCGGG 61.809 63.158 6.32 0.00 0.00 5.73
727 745 1.448893 GCTCGTAATGCAACCGGGA 60.449 57.895 6.32 0.00 0.00 5.14
728 746 1.702491 GCTCGTAATGCAACCGGGAC 61.702 60.000 6.32 0.00 0.00 4.46
729 747 0.108329 CTCGTAATGCAACCGGGACT 60.108 55.000 6.32 0.00 0.00 3.85
730 748 1.135527 CTCGTAATGCAACCGGGACTA 59.864 52.381 6.32 0.00 0.00 2.59
731 749 1.549620 TCGTAATGCAACCGGGACTAA 59.450 47.619 6.32 0.00 0.00 2.24
732 750 2.168936 TCGTAATGCAACCGGGACTAAT 59.831 45.455 6.32 0.00 0.00 1.73
733 751 2.286833 CGTAATGCAACCGGGACTAATG 59.713 50.000 6.32 0.00 0.00 1.90
734 752 2.507407 AATGCAACCGGGACTAATGT 57.493 45.000 6.32 0.00 0.00 2.71
735 753 1.750193 ATGCAACCGGGACTAATGTG 58.250 50.000 6.32 0.00 0.00 3.21
736 754 0.687920 TGCAACCGGGACTAATGTGA 59.312 50.000 6.32 0.00 0.00 3.58
737 755 1.072489 TGCAACCGGGACTAATGTGAA 59.928 47.619 6.32 0.00 0.00 3.18
738 756 1.737793 GCAACCGGGACTAATGTGAAG 59.262 52.381 6.32 0.00 0.00 3.02
739 757 2.614481 GCAACCGGGACTAATGTGAAGA 60.614 50.000 6.32 0.00 0.00 2.87
740 758 3.000727 CAACCGGGACTAATGTGAAGAC 58.999 50.000 6.32 0.00 0.00 3.01
741 759 2.537143 ACCGGGACTAATGTGAAGACT 58.463 47.619 6.32 0.00 0.00 3.24
742 760 3.705051 ACCGGGACTAATGTGAAGACTA 58.295 45.455 6.32 0.00 0.00 2.59
743 761 4.091549 ACCGGGACTAATGTGAAGACTAA 58.908 43.478 6.32 0.00 0.00 2.24
744 762 4.529377 ACCGGGACTAATGTGAAGACTAAA 59.471 41.667 6.32 0.00 0.00 1.85
745 763 5.109903 CCGGGACTAATGTGAAGACTAAAG 58.890 45.833 0.00 0.00 0.00 1.85
746 764 4.567159 CGGGACTAATGTGAAGACTAAAGC 59.433 45.833 0.00 0.00 0.00 3.51
747 765 4.876679 GGGACTAATGTGAAGACTAAAGCC 59.123 45.833 0.00 0.00 0.00 4.35
748 766 4.876679 GGACTAATGTGAAGACTAAAGCCC 59.123 45.833 0.00 0.00 0.00 5.19
749 767 5.338463 GGACTAATGTGAAGACTAAAGCCCT 60.338 44.000 0.00 0.00 0.00 5.19
750 768 5.491982 ACTAATGTGAAGACTAAAGCCCTG 58.508 41.667 0.00 0.00 0.00 4.45
751 769 4.373156 AATGTGAAGACTAAAGCCCTGT 57.627 40.909 0.00 0.00 0.00 4.00
752 770 3.857157 TGTGAAGACTAAAGCCCTGTT 57.143 42.857 0.00 0.00 0.00 3.16
753 771 4.164843 TGTGAAGACTAAAGCCCTGTTT 57.835 40.909 0.00 0.00 0.00 2.83
754 772 4.532834 TGTGAAGACTAAAGCCCTGTTTT 58.467 39.130 0.00 0.00 0.00 2.43
755 773 4.578928 TGTGAAGACTAAAGCCCTGTTTTC 59.421 41.667 0.00 0.00 0.00 2.29
756 774 4.822350 GTGAAGACTAAAGCCCTGTTTTCT 59.178 41.667 0.00 0.00 0.00 2.52
757 775 5.995897 GTGAAGACTAAAGCCCTGTTTTCTA 59.004 40.000 0.00 0.00 0.00 2.10
758 776 5.995897 TGAAGACTAAAGCCCTGTTTTCTAC 59.004 40.000 0.00 0.00 0.00 2.59
759 777 5.827326 AGACTAAAGCCCTGTTTTCTACT 57.173 39.130 0.00 0.00 0.00 2.57
760 778 6.930068 AGACTAAAGCCCTGTTTTCTACTA 57.070 37.500 0.00 0.00 0.00 1.82
761 779 6.937392 AGACTAAAGCCCTGTTTTCTACTAG 58.063 40.000 0.00 0.00 0.00 2.57
762 780 5.489249 ACTAAAGCCCTGTTTTCTACTAGC 58.511 41.667 0.00 0.00 0.00 3.42
763 781 2.674796 AGCCCTGTTTTCTACTAGCG 57.325 50.000 0.00 0.00 0.00 4.26
764 782 1.900486 AGCCCTGTTTTCTACTAGCGT 59.100 47.619 0.00 0.00 0.00 5.07
765 783 2.000447 GCCCTGTTTTCTACTAGCGTG 59.000 52.381 0.00 0.00 0.00 5.34
766 784 2.618053 CCCTGTTTTCTACTAGCGTGG 58.382 52.381 0.00 0.00 0.00 4.94
767 785 2.232941 CCCTGTTTTCTACTAGCGTGGA 59.767 50.000 0.00 0.00 0.00 4.02
768 786 3.251571 CCTGTTTTCTACTAGCGTGGAC 58.748 50.000 0.00 0.00 29.69 4.02
769 787 2.915463 CTGTTTTCTACTAGCGTGGACG 59.085 50.000 0.00 0.00 43.27 4.79
770 788 2.257034 GTTTTCTACTAGCGTGGACGG 58.743 52.381 0.71 0.00 40.23 4.79
771 789 1.825090 TTTCTACTAGCGTGGACGGA 58.175 50.000 0.71 0.00 40.23 4.69
811 829 2.869503 ATCAATCGGTGTCGGTGGGC 62.870 60.000 0.00 0.00 36.95 5.36
824 842 1.450134 GTGGGCTCATGATGCGTCA 60.450 57.895 11.83 11.83 39.04 4.35
827 845 0.816825 GGGCTCATGATGCGTCACAT 60.817 55.000 11.65 0.00 43.54 3.21
835 853 1.821136 TGATGCGTCACATGTCTCTCT 59.179 47.619 3.97 0.00 39.84 3.10
836 854 2.159324 TGATGCGTCACATGTCTCTCTC 60.159 50.000 3.97 0.00 39.84 3.20
837 855 1.539157 TGCGTCACATGTCTCTCTCT 58.461 50.000 0.00 0.00 0.00 3.10
838 856 1.200948 TGCGTCACATGTCTCTCTCTG 59.799 52.381 0.00 0.00 0.00 3.35
839 857 1.468908 GCGTCACATGTCTCTCTCTGG 60.469 57.143 0.00 0.00 0.00 3.86
840 858 1.468908 CGTCACATGTCTCTCTCTGGC 60.469 57.143 0.00 0.00 0.00 4.85
841 859 1.824230 GTCACATGTCTCTCTCTGGCT 59.176 52.381 0.00 0.00 0.00 4.75
863 881 2.663188 GCCAGCGATCACGATCCC 60.663 66.667 1.50 0.00 42.66 3.85
864 882 2.814604 CCAGCGATCACGATCCCA 59.185 61.111 1.50 0.00 42.66 4.37
903 922 1.639298 GGTCAACGAGCCAGCATGTC 61.639 60.000 0.00 0.00 0.00 3.06
914 933 1.296727 CAGCATGTCATCGACTGCAT 58.703 50.000 15.77 0.00 38.32 3.96
938 957 7.223260 TCATCAAATGAGAAATGATATGCCC 57.777 36.000 0.00 0.00 33.59 5.36
939 958 7.008332 TCATCAAATGAGAAATGATATGCCCT 58.992 34.615 0.00 0.00 33.59 5.19
940 959 6.889301 TCAAATGAGAAATGATATGCCCTC 57.111 37.500 0.00 0.00 0.00 4.30
941 960 5.771666 TCAAATGAGAAATGATATGCCCTCC 59.228 40.000 0.00 0.00 0.00 4.30
945 964 2.705658 AGAAATGATATGCCCTCCGTCA 59.294 45.455 0.00 0.00 0.00 4.35
946 965 3.328931 AGAAATGATATGCCCTCCGTCAT 59.671 43.478 0.00 0.00 0.00 3.06
947 966 2.775911 ATGATATGCCCTCCGTCATG 57.224 50.000 0.00 0.00 0.00 3.07
976 1194 1.151908 CCCGGTAGCTAGCTCTCCT 59.848 63.158 23.26 0.00 0.00 3.69
984 1202 1.468506 GCTAGCTCTCCTGTAGGCCC 61.469 65.000 7.70 0.00 34.44 5.80
1075 1293 1.704070 GACGTCTCAACTCTCAAGGC 58.296 55.000 8.70 0.00 0.00 4.35
1129 1347 6.883217 TCTTCCTCCTTCATTTCTCTGATTTG 59.117 38.462 0.00 0.00 0.00 2.32
1155 1373 2.362397 TCTGCTTCAGTTCGAACAGACT 59.638 45.455 28.78 6.35 37.10 3.24
1161 1379 1.341531 CAGTTCGAACAGACTGAGGGT 59.658 52.381 28.78 2.27 33.07 4.34
1412 1634 2.552743 CGCTACCGAGAGTTCCATGATA 59.447 50.000 0.00 0.00 36.29 2.15
1441 1663 4.161001 CCCATGCTTGGCTTCTTTTATTCT 59.839 41.667 13.15 0.00 42.15 2.40
1479 1701 1.443872 CCCACGACGAAGGAGAACG 60.444 63.158 0.00 0.00 0.00 3.95
1915 2234 2.158505 AGCTAGGCATGCATTCATTCCT 60.159 45.455 21.36 7.05 45.99 3.36
2222 2544 4.926244 TCAGCATAGAGTTGTCGATCTTC 58.074 43.478 0.00 0.00 0.00 2.87
2733 3211 3.181493 GCTCATTGATGGCTTAGTGTTGG 60.181 47.826 0.00 0.00 0.00 3.77
2819 3297 4.512944 GTGGTCTCGTGATGAATTATGCAT 59.487 41.667 3.79 3.79 0.00 3.96
2897 3375 3.118038 AGTCGGCCAGCTTAATAATTCCA 60.118 43.478 2.24 0.00 0.00 3.53
3072 3554 7.807977 ATATCTTTCAATATCAAGTTGCCGT 57.192 32.000 0.00 0.00 0.00 5.68
3099 3581 3.207669 GCCGCCTCTTCATGCCTG 61.208 66.667 0.00 0.00 0.00 4.85
3176 3658 1.541147 ACCTTTGTGCAACCATCGATG 59.459 47.619 18.76 18.76 34.36 3.84
3259 3741 2.927856 TGGAAGCTTCTCCCCGCA 60.928 61.111 25.05 11.19 34.22 5.69
3331 3814 1.474330 AATGGGACGATTTGCCTTCC 58.526 50.000 0.00 0.00 36.40 3.46
3342 3825 3.443925 GCCTTCCCTTTCGCTGCC 61.444 66.667 0.00 0.00 0.00 4.85
3349 3832 1.373371 CCTTTCGCTGCCCTTTTGC 60.373 57.895 0.00 0.00 0.00 3.68
3384 3867 8.746751 GCTTAATGACTGAAACAAGAAAAAGTC 58.253 33.333 0.00 0.00 35.66 3.01
3394 3877 9.299963 TGAAACAAGAAAAAGTCATACAACATG 57.700 29.630 0.00 0.00 0.00 3.21
3429 3914 7.255277 GGGAAATAAATACTCCAAGCTTGCTAG 60.255 40.741 21.43 20.46 0.00 3.42
3532 4019 1.593196 TTTGAGGCGTGAGAACAAGG 58.407 50.000 0.00 0.00 0.00 3.61
3540 4027 2.985139 GCGTGAGAACAAGGTACTACAC 59.015 50.000 0.00 0.00 38.49 2.90
3583 4070 6.988580 TGATTGACTCTATAGAATGGTGCAAG 59.011 38.462 3.57 0.00 0.00 4.01
3603 4090 5.799213 CAAGGGTGAGTATGAGAAGAGTTT 58.201 41.667 0.00 0.00 0.00 2.66
3618 4105 1.194772 GAGTTTGAGCAGGTTACGTGC 59.805 52.381 20.54 20.54 44.27 5.34
3668 4155 7.500227 TGCCTATGAATTGATAGACAAAGAAGG 59.500 37.037 12.91 0.00 42.03 3.46
3671 4158 6.992063 TGAATTGATAGACAAAGAAGGCTC 57.008 37.500 0.00 0.00 42.03 4.70
3679 4166 3.513515 AGACAAAGAAGGCTCCAGTCTAG 59.486 47.826 6.34 0.00 33.51 2.43
3680 4167 3.511477 ACAAAGAAGGCTCCAGTCTAGA 58.489 45.455 0.00 0.00 0.00 2.43
3695 4182 4.334203 CAGTCTAGAGTAGCATGTCGTTCT 59.666 45.833 0.00 0.00 0.00 3.01
3696 4183 4.944930 AGTCTAGAGTAGCATGTCGTTCTT 59.055 41.667 0.00 0.00 0.00 2.52
3697 4184 5.065474 AGTCTAGAGTAGCATGTCGTTCTTC 59.935 44.000 0.00 0.00 0.00 2.87
3698 4185 4.941873 TCTAGAGTAGCATGTCGTTCTTCA 59.058 41.667 0.00 0.00 0.00 3.02
3699 4186 4.103365 AGAGTAGCATGTCGTTCTTCAG 57.897 45.455 0.00 0.00 0.00 3.02
3700 4187 3.759086 AGAGTAGCATGTCGTTCTTCAGA 59.241 43.478 0.00 0.00 0.00 3.27
3701 4188 3.839293 AGTAGCATGTCGTTCTTCAGAC 58.161 45.455 0.00 0.00 37.85 3.51
3702 4189 1.702886 AGCATGTCGTTCTTCAGACG 58.297 50.000 0.00 0.00 40.05 4.18
3703 4190 0.716108 GCATGTCGTTCTTCAGACGG 59.284 55.000 0.00 0.00 40.05 4.79
3704 4191 1.935300 GCATGTCGTTCTTCAGACGGT 60.935 52.381 0.00 0.00 40.05 4.83
3705 4192 2.404215 CATGTCGTTCTTCAGACGGTT 58.596 47.619 0.00 0.00 40.05 4.44
3706 4193 3.571571 CATGTCGTTCTTCAGACGGTTA 58.428 45.455 0.00 0.00 40.05 2.85
3707 4194 3.004024 TGTCGTTCTTCAGACGGTTAC 57.996 47.619 0.00 0.00 40.05 2.50
3708 4195 2.358582 TGTCGTTCTTCAGACGGTTACA 59.641 45.455 0.00 0.00 40.05 2.41
3709 4196 2.978489 GTCGTTCTTCAGACGGTTACAG 59.022 50.000 0.00 0.00 0.00 2.74
3710 4197 2.030540 TCGTTCTTCAGACGGTTACAGG 60.031 50.000 0.00 0.00 0.00 4.00
3711 4198 2.288030 CGTTCTTCAGACGGTTACAGGT 60.288 50.000 0.00 0.00 0.00 4.00
3712 4199 3.058016 CGTTCTTCAGACGGTTACAGGTA 60.058 47.826 0.00 0.00 0.00 3.08
3713 4200 4.233005 GTTCTTCAGACGGTTACAGGTAC 58.767 47.826 0.00 0.00 0.00 3.34
3714 4201 3.489355 TCTTCAGACGGTTACAGGTACA 58.511 45.455 0.00 0.00 0.00 2.90
3715 4202 3.504906 TCTTCAGACGGTTACAGGTACAG 59.495 47.826 0.00 0.00 0.00 2.74
3716 4203 2.165167 TCAGACGGTTACAGGTACAGG 58.835 52.381 0.00 0.00 0.00 4.00
3721 4208 2.699846 ACGGTTACAGGTACAGGTTCAA 59.300 45.455 0.00 0.00 0.00 2.69
3775 4262 3.993081 CTGTTTGACCTGCAAGAGACTAG 59.007 47.826 0.00 0.00 37.87 2.57
3811 4298 4.142160 GGAAGTGGAATTATTTGTCCTGCC 60.142 45.833 0.00 0.00 34.77 4.85
3829 4316 5.544176 TCCTGCCCGAGATTTATAAAGATCT 59.456 40.000 3.94 2.73 35.41 2.75
3873 4360 7.010339 AGTAAAGTTACAGATCTTGAGGCTT 57.990 36.000 0.00 0.00 36.12 4.35
3891 4378 4.773323 GCTTAACAGCAGGAAGTGAAAT 57.227 40.909 0.00 0.00 46.49 2.17
3892 4379 5.126396 GCTTAACAGCAGGAAGTGAAATT 57.874 39.130 0.00 0.00 46.49 1.82
3893 4380 4.919754 GCTTAACAGCAGGAAGTGAAATTG 59.080 41.667 0.00 0.00 46.49 2.32
3894 4381 5.507985 GCTTAACAGCAGGAAGTGAAATTGT 60.508 40.000 0.00 0.00 46.49 2.71
3895 4382 6.463995 TTAACAGCAGGAAGTGAAATTGTT 57.536 33.333 0.00 0.00 0.00 2.83
3896 4383 5.343307 AACAGCAGGAAGTGAAATTGTTT 57.657 34.783 0.00 0.00 0.00 2.83
3897 4384 4.685924 ACAGCAGGAAGTGAAATTGTTTG 58.314 39.130 0.00 0.00 0.00 2.93
3898 4385 4.053295 CAGCAGGAAGTGAAATTGTTTGG 58.947 43.478 0.00 0.00 0.00 3.28
3899 4386 3.706086 AGCAGGAAGTGAAATTGTTTGGT 59.294 39.130 0.00 0.00 0.00 3.67
3900 4387 4.051237 GCAGGAAGTGAAATTGTTTGGTC 58.949 43.478 0.00 0.00 0.00 4.02
3901 4388 4.202151 GCAGGAAGTGAAATTGTTTGGTCT 60.202 41.667 0.00 0.00 0.00 3.85
3902 4389 5.284079 CAGGAAGTGAAATTGTTTGGTCTG 58.716 41.667 0.00 0.00 0.00 3.51
3903 4390 4.051237 GGAAGTGAAATTGTTTGGTCTGC 58.949 43.478 0.00 0.00 0.00 4.26
3904 4391 4.441356 GGAAGTGAAATTGTTTGGTCTGCA 60.441 41.667 0.00 0.00 0.00 4.41
3905 4392 4.045636 AGTGAAATTGTTTGGTCTGCAC 57.954 40.909 0.00 0.00 0.00 4.57
3906 4393 3.123050 GTGAAATTGTTTGGTCTGCACC 58.877 45.455 0.00 0.00 44.10 5.01
3907 4394 2.102252 TGAAATTGTTTGGTCTGCACCC 59.898 45.455 0.00 0.00 42.99 4.61
3908 4395 1.047801 AATTGTTTGGTCTGCACCCC 58.952 50.000 0.00 0.00 42.99 4.95
3909 4396 0.188342 ATTGTTTGGTCTGCACCCCT 59.812 50.000 0.00 0.00 42.99 4.79
3910 4397 0.754957 TTGTTTGGTCTGCACCCCTG 60.755 55.000 0.00 0.00 42.99 4.45
3911 4398 1.150536 GTTTGGTCTGCACCCCTGA 59.849 57.895 0.00 0.00 42.99 3.86
3912 4399 0.467290 GTTTGGTCTGCACCCCTGAA 60.467 55.000 0.00 0.00 42.99 3.02
3913 4400 0.467290 TTTGGTCTGCACCCCTGAAC 60.467 55.000 0.00 0.00 42.99 3.18
3914 4401 2.034221 GGTCTGCACCCCTGAACC 59.966 66.667 0.00 0.00 36.54 3.62
3915 4402 2.529744 GGTCTGCACCCCTGAACCT 61.530 63.158 0.00 0.00 36.54 3.50
3916 4403 1.302832 GTCTGCACCCCTGAACCTG 60.303 63.158 0.00 0.00 0.00 4.00
3917 4404 1.461268 TCTGCACCCCTGAACCTGA 60.461 57.895 0.00 0.00 0.00 3.86
3918 4405 1.302832 CTGCACCCCTGAACCTGAC 60.303 63.158 0.00 0.00 0.00 3.51
3919 4406 2.055689 CTGCACCCCTGAACCTGACA 62.056 60.000 0.00 0.00 0.00 3.58
3920 4407 1.302832 GCACCCCTGAACCTGACAG 60.303 63.158 0.00 0.00 35.43 3.51
3921 4408 2.056906 GCACCCCTGAACCTGACAGT 62.057 60.000 0.93 0.00 34.04 3.55
3922 4409 0.035458 CACCCCTGAACCTGACAGTC 59.965 60.000 0.93 0.00 34.04 3.51
3923 4410 0.104934 ACCCCTGAACCTGACAGTCT 60.105 55.000 1.31 0.00 34.04 3.24
3924 4411 1.059913 CCCCTGAACCTGACAGTCTT 58.940 55.000 1.31 0.00 34.04 3.01
3925 4412 1.421646 CCCCTGAACCTGACAGTCTTT 59.578 52.381 1.31 0.00 34.04 2.52
3926 4413 2.158608 CCCCTGAACCTGACAGTCTTTT 60.159 50.000 1.31 0.00 34.04 2.27
3927 4414 3.555966 CCCTGAACCTGACAGTCTTTTT 58.444 45.455 1.31 0.00 34.04 1.94
3948 4435 3.358111 TGTTGTCCAACAGGAAGTGAA 57.642 42.857 8.71 0.00 45.42 3.18
3949 4436 3.691575 TGTTGTCCAACAGGAAGTGAAA 58.308 40.909 8.71 0.00 45.42 2.69
3950 4437 4.277476 TGTTGTCCAACAGGAAGTGAAAT 58.723 39.130 8.71 0.00 45.42 2.17
3951 4438 4.709397 TGTTGTCCAACAGGAAGTGAAATT 59.291 37.500 8.71 0.00 45.42 1.82
3952 4439 4.916983 TGTCCAACAGGAAGTGAAATTG 57.083 40.909 0.00 0.00 32.04 2.32
3953 4440 4.277476 TGTCCAACAGGAAGTGAAATTGT 58.723 39.130 0.00 0.00 32.04 2.71
3954 4441 4.709397 TGTCCAACAGGAAGTGAAATTGTT 59.291 37.500 0.00 0.00 32.04 2.83
3955 4442 5.186797 TGTCCAACAGGAAGTGAAATTGTTT 59.813 36.000 0.00 0.00 32.04 2.83
3956 4443 5.519927 GTCCAACAGGAAGTGAAATTGTTTG 59.480 40.000 0.00 0.00 32.04 2.93
3957 4444 5.420421 TCCAACAGGAAGTGAAATTGTTTGA 59.580 36.000 0.00 0.00 30.15 2.69
3958 4445 5.519927 CCAACAGGAAGTGAAATTGTTTGAC 59.480 40.000 0.00 0.00 30.15 3.18
3959 4446 5.262588 ACAGGAAGTGAAATTGTTTGACC 57.737 39.130 0.00 0.00 0.00 4.02
3960 4447 4.709397 ACAGGAAGTGAAATTGTTTGACCA 59.291 37.500 0.00 0.00 0.00 4.02
3961 4448 5.163519 ACAGGAAGTGAAATTGTTTGACCAG 60.164 40.000 0.00 0.00 0.00 4.00
3962 4449 4.051237 GGAAGTGAAATTGTTTGACCAGC 58.949 43.478 0.00 0.00 0.00 4.85
3963 4450 4.202151 GGAAGTGAAATTGTTTGACCAGCT 60.202 41.667 0.00 0.00 0.00 4.24
3964 4451 5.009610 GGAAGTGAAATTGTTTGACCAGCTA 59.990 40.000 0.00 0.00 0.00 3.32
3965 4452 6.460953 GGAAGTGAAATTGTTTGACCAGCTAA 60.461 38.462 0.00 0.00 0.00 3.09
3966 4453 6.655078 AGTGAAATTGTTTGACCAGCTAAT 57.345 33.333 0.00 0.00 0.00 1.73
3967 4454 7.759489 AGTGAAATTGTTTGACCAGCTAATA 57.241 32.000 0.00 0.00 0.00 0.98
3968 4455 8.177119 AGTGAAATTGTTTGACCAGCTAATAA 57.823 30.769 0.00 0.00 0.00 1.40
3969 4456 8.806146 AGTGAAATTGTTTGACCAGCTAATAAT 58.194 29.630 0.00 0.00 0.00 1.28
3970 4457 8.863049 GTGAAATTGTTTGACCAGCTAATAATG 58.137 33.333 0.00 0.00 0.00 1.90
3971 4458 7.545265 TGAAATTGTTTGACCAGCTAATAATGC 59.455 33.333 0.00 0.00 0.00 3.56
3972 4459 5.973899 TTGTTTGACCAGCTAATAATGCA 57.026 34.783 0.00 0.00 0.00 3.96
3973 4460 6.528537 TTGTTTGACCAGCTAATAATGCAT 57.471 33.333 0.00 0.00 0.00 3.96
3974 4461 5.893687 TGTTTGACCAGCTAATAATGCATG 58.106 37.500 0.00 0.00 0.00 4.06
3975 4462 5.651576 TGTTTGACCAGCTAATAATGCATGA 59.348 36.000 0.00 0.00 0.00 3.07
3976 4463 6.321945 TGTTTGACCAGCTAATAATGCATGAT 59.678 34.615 0.00 0.00 0.00 2.45
3977 4464 6.964807 TTGACCAGCTAATAATGCATGATT 57.035 33.333 13.93 13.93 0.00 2.57
3978 4465 8.352201 GTTTGACCAGCTAATAATGCATGATTA 58.648 33.333 14.65 14.65 0.00 1.75
3979 4466 7.677454 TGACCAGCTAATAATGCATGATTAG 57.323 36.000 29.13 29.13 38.26 1.73
3980 4467 6.656270 TGACCAGCTAATAATGCATGATTAGG 59.344 38.462 31.94 23.52 36.53 2.69
3981 4468 5.948162 ACCAGCTAATAATGCATGATTAGGG 59.052 40.000 31.94 27.93 36.53 3.53
3982 4469 5.359009 CCAGCTAATAATGCATGATTAGGGG 59.641 44.000 31.94 17.06 36.53 4.79
3983 4470 6.182627 CAGCTAATAATGCATGATTAGGGGA 58.817 40.000 31.94 10.03 36.53 4.81
3984 4471 6.660521 CAGCTAATAATGCATGATTAGGGGAA 59.339 38.462 31.94 9.43 36.53 3.97
3985 4472 7.177216 CAGCTAATAATGCATGATTAGGGGAAA 59.823 37.037 31.94 8.83 36.53 3.13
3986 4473 7.729881 AGCTAATAATGCATGATTAGGGGAAAA 59.270 33.333 31.94 8.23 36.53 2.29
3987 4474 8.031277 GCTAATAATGCATGATTAGGGGAAAAG 58.969 37.037 31.94 16.29 36.53 2.27
3988 4475 4.677673 AATGCATGATTAGGGGAAAAGC 57.322 40.909 0.00 0.00 0.00 3.51
3989 4476 3.098774 TGCATGATTAGGGGAAAAGCA 57.901 42.857 0.00 0.00 0.00 3.91
3990 4477 3.645434 TGCATGATTAGGGGAAAAGCAT 58.355 40.909 0.00 0.00 33.44 3.79
3991 4478 4.032310 TGCATGATTAGGGGAAAAGCATT 58.968 39.130 0.00 0.00 30.92 3.56
3992 4479 4.141892 TGCATGATTAGGGGAAAAGCATTG 60.142 41.667 0.00 0.00 30.92 2.82
3993 4480 4.741536 GCATGATTAGGGGAAAAGCATTGG 60.742 45.833 0.00 0.00 30.92 3.16
3994 4481 3.373830 TGATTAGGGGAAAAGCATTGGG 58.626 45.455 0.00 0.00 0.00 4.12
3995 4482 3.012274 TGATTAGGGGAAAAGCATTGGGA 59.988 43.478 0.00 0.00 0.00 4.37
3996 4483 2.525105 TAGGGGAAAAGCATTGGGAC 57.475 50.000 0.00 0.00 0.00 4.46
3997 4484 0.611896 AGGGGAAAAGCATTGGGACG 60.612 55.000 0.00 0.00 0.00 4.79
3998 4485 0.898326 GGGGAAAAGCATTGGGACGT 60.898 55.000 0.00 0.00 0.00 4.34
3999 4486 0.243636 GGGAAAAGCATTGGGACGTG 59.756 55.000 0.00 0.00 0.00 4.49
4000 4487 0.243636 GGAAAAGCATTGGGACGTGG 59.756 55.000 0.00 0.00 0.00 4.94
4001 4488 0.388520 GAAAAGCATTGGGACGTGGC 60.389 55.000 0.00 0.00 0.00 5.01
4002 4489 2.141122 AAAAGCATTGGGACGTGGCG 62.141 55.000 0.00 0.00 0.00 5.69
4003 4490 3.545124 AAGCATTGGGACGTGGCGA 62.545 57.895 0.00 0.00 0.00 5.54
4004 4491 2.819984 AAGCATTGGGACGTGGCGAT 62.820 55.000 0.00 0.00 0.00 4.58
4005 4492 2.823829 GCATTGGGACGTGGCGATC 61.824 63.158 0.00 0.00 0.00 3.69
4006 4493 1.153369 CATTGGGACGTGGCGATCT 60.153 57.895 0.00 0.00 0.00 2.75
4007 4494 0.744414 CATTGGGACGTGGCGATCTT 60.744 55.000 0.00 0.00 0.00 2.40
4008 4495 0.462047 ATTGGGACGTGGCGATCTTC 60.462 55.000 0.00 0.00 0.00 2.87
4009 4496 1.541310 TTGGGACGTGGCGATCTTCT 61.541 55.000 0.00 0.00 0.00 2.85
4010 4497 1.519455 GGGACGTGGCGATCTTCTG 60.519 63.158 0.00 0.00 0.00 3.02
4011 4498 1.215647 GGACGTGGCGATCTTCTGT 59.784 57.895 0.00 0.00 0.00 3.41
4012 4499 0.454600 GGACGTGGCGATCTTCTGTA 59.545 55.000 0.00 0.00 0.00 2.74
4013 4500 1.067212 GGACGTGGCGATCTTCTGTAT 59.933 52.381 0.00 0.00 0.00 2.29
4014 4501 2.120232 GACGTGGCGATCTTCTGTATG 58.880 52.381 0.00 0.00 0.00 2.39
4015 4502 0.855349 CGTGGCGATCTTCTGTATGC 59.145 55.000 0.00 0.00 0.00 3.14
4016 4503 1.221414 GTGGCGATCTTCTGTATGCC 58.779 55.000 0.00 0.00 42.76 4.40
4017 4504 0.106708 TGGCGATCTTCTGTATGCCC 59.893 55.000 0.00 0.00 41.77 5.36
4018 4505 0.106708 GGCGATCTTCTGTATGCCCA 59.893 55.000 0.00 0.00 36.51 5.36
4019 4506 1.506493 GCGATCTTCTGTATGCCCAG 58.494 55.000 0.00 0.00 0.00 4.45
4020 4507 1.506493 CGATCTTCTGTATGCCCAGC 58.494 55.000 0.00 0.00 32.32 4.85
4021 4508 1.875576 CGATCTTCTGTATGCCCAGCC 60.876 57.143 0.00 0.00 32.32 4.85
4022 4509 0.475906 ATCTTCTGTATGCCCAGCCC 59.524 55.000 0.00 0.00 32.32 5.19
4023 4510 0.621571 TCTTCTGTATGCCCAGCCCT 60.622 55.000 0.00 0.00 32.32 5.19
4024 4511 0.465097 CTTCTGTATGCCCAGCCCTG 60.465 60.000 0.00 0.00 32.32 4.45
4025 4512 1.207488 TTCTGTATGCCCAGCCCTGT 61.207 55.000 0.00 0.00 32.32 4.00
4026 4513 1.207488 TCTGTATGCCCAGCCCTGTT 61.207 55.000 0.00 0.00 32.32 3.16
4027 4514 1.001020 TGTATGCCCAGCCCTGTTG 60.001 57.895 0.00 0.00 0.00 3.33
4028 4515 2.044053 TATGCCCAGCCCTGTTGC 60.044 61.111 0.00 0.00 0.00 4.17
4029 4516 2.615465 TATGCCCAGCCCTGTTGCT 61.615 57.895 8.04 0.00 44.00 3.91
4036 4523 2.877975 AGCCCTGTTGCTGCATTAG 58.122 52.632 1.84 4.91 40.90 1.73
4049 4536 4.270178 CTGCATTAGCTCTACAACAAGC 57.730 45.455 0.00 0.00 42.74 4.01
4050 4537 3.673902 TGCATTAGCTCTACAACAAGCA 58.326 40.909 0.00 0.00 41.06 3.91
4051 4538 4.264253 TGCATTAGCTCTACAACAAGCAT 58.736 39.130 0.00 0.00 41.06 3.79
4052 4539 4.333649 TGCATTAGCTCTACAACAAGCATC 59.666 41.667 0.00 0.00 41.06 3.91
4053 4540 4.333649 GCATTAGCTCTACAACAAGCATCA 59.666 41.667 0.00 0.00 41.06 3.07
4054 4541 5.503683 GCATTAGCTCTACAACAAGCATCAG 60.504 44.000 0.00 0.00 41.06 2.90
4055 4542 3.692257 AGCTCTACAACAAGCATCAGT 57.308 42.857 0.00 0.00 41.06 3.41
4056 4543 3.332919 AGCTCTACAACAAGCATCAGTG 58.667 45.455 0.00 0.00 41.06 3.66
4057 4544 2.417933 GCTCTACAACAAGCATCAGTGG 59.582 50.000 0.00 0.00 38.42 4.00
4058 4545 3.866066 GCTCTACAACAAGCATCAGTGGA 60.866 47.826 0.00 0.00 38.42 4.02
4059 4546 3.664107 TCTACAACAAGCATCAGTGGAC 58.336 45.455 0.00 0.00 0.00 4.02
4060 4547 2.346766 ACAACAAGCATCAGTGGACA 57.653 45.000 0.00 0.00 0.00 4.02
4061 4548 2.224606 ACAACAAGCATCAGTGGACAG 58.775 47.619 0.00 0.00 0.00 3.51
4062 4549 2.158769 ACAACAAGCATCAGTGGACAGA 60.159 45.455 0.00 0.00 0.00 3.41
4063 4550 2.469274 ACAAGCATCAGTGGACAGAG 57.531 50.000 0.00 0.00 0.00 3.35
4064 4551 1.002888 ACAAGCATCAGTGGACAGAGG 59.997 52.381 0.00 0.00 0.00 3.69
4065 4552 1.002888 CAAGCATCAGTGGACAGAGGT 59.997 52.381 0.00 0.00 0.00 3.85
4066 4553 1.356124 AGCATCAGTGGACAGAGGTT 58.644 50.000 0.00 0.00 0.00 3.50
4067 4554 2.540383 AGCATCAGTGGACAGAGGTTA 58.460 47.619 0.00 0.00 0.00 2.85
4068 4555 2.499289 AGCATCAGTGGACAGAGGTTAG 59.501 50.000 0.00 0.00 0.00 2.34
4069 4556 2.234908 GCATCAGTGGACAGAGGTTAGT 59.765 50.000 0.00 0.00 0.00 2.24
4070 4557 3.447586 GCATCAGTGGACAGAGGTTAGTA 59.552 47.826 0.00 0.00 0.00 1.82
4071 4558 4.440802 GCATCAGTGGACAGAGGTTAGTAG 60.441 50.000 0.00 0.00 0.00 2.57
4072 4559 4.383931 TCAGTGGACAGAGGTTAGTAGT 57.616 45.455 0.00 0.00 0.00 2.73
4073 4560 5.509832 TCAGTGGACAGAGGTTAGTAGTA 57.490 43.478 0.00 0.00 0.00 1.82
4074 4561 5.498393 TCAGTGGACAGAGGTTAGTAGTAG 58.502 45.833 0.00 0.00 0.00 2.57
4075 4562 4.096682 CAGTGGACAGAGGTTAGTAGTAGC 59.903 50.000 0.00 0.00 0.00 3.58
4076 4563 3.065095 GTGGACAGAGGTTAGTAGTAGCG 59.935 52.174 0.00 0.00 0.00 4.26
4077 4564 3.054875 TGGACAGAGGTTAGTAGTAGCGA 60.055 47.826 0.00 0.00 0.00 4.93
4078 4565 4.136051 GGACAGAGGTTAGTAGTAGCGAT 58.864 47.826 0.00 0.00 0.00 4.58
4079 4566 4.023878 GGACAGAGGTTAGTAGTAGCGATG 60.024 50.000 0.00 0.00 0.00 3.84
4080 4567 4.778579 ACAGAGGTTAGTAGTAGCGATGA 58.221 43.478 0.00 0.00 0.00 2.92
4081 4568 5.378332 ACAGAGGTTAGTAGTAGCGATGAT 58.622 41.667 0.00 0.00 0.00 2.45
4082 4569 5.470777 ACAGAGGTTAGTAGTAGCGATGATC 59.529 44.000 0.00 0.00 0.00 2.92
4083 4570 5.470437 CAGAGGTTAGTAGTAGCGATGATCA 59.530 44.000 0.00 0.00 0.00 2.92
4084 4571 6.017026 CAGAGGTTAGTAGTAGCGATGATCAA 60.017 42.308 0.00 0.00 0.00 2.57
4085 4572 6.717540 AGAGGTTAGTAGTAGCGATGATCAAT 59.282 38.462 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 8.373981 AGTGATGATGGGTGATTAGAGATTAAG 58.626 37.037 0.00 0.00 0.00 1.85
45 46 6.421485 AGAGGTTAAATTGAGCAGTGATGAT 58.579 36.000 0.00 0.00 0.00 2.45
220 222 8.972662 TCCTGAGGATTAATAGGATTGACATA 57.027 34.615 0.00 0.00 34.54 2.29
237 239 2.234908 GCTCAAGCTAAACTCCTGAGGA 59.765 50.000 0.00 0.00 38.21 3.71
571 589 4.582701 AAATGTTCAGCACGAAAATCCA 57.417 36.364 0.00 0.00 34.69 3.41
601 619 2.696506 GACCTTTAGTCCCGGTTTGAG 58.303 52.381 0.00 0.00 39.84 3.02
602 620 2.845363 GACCTTTAGTCCCGGTTTGA 57.155 50.000 0.00 0.00 39.84 2.69
607 625 7.279536 GACTAAAAATTAGACCTTTAGTCCCGG 59.720 40.741 19.87 0.00 46.96 5.73
608 626 8.194433 GACTAAAAATTAGACCTTTAGTCCCG 57.806 38.462 19.87 0.00 46.96 5.14
612 630 7.108194 CCGGGACTAAAAATTAGACCTTTAGT 58.892 38.462 14.96 10.56 44.54 2.24
613 631 7.108194 ACCGGGACTAAAAATTAGACCTTTAG 58.892 38.462 6.32 5.44 38.20 1.85
614 632 7.019656 ACCGGGACTAAAAATTAGACCTTTA 57.980 36.000 6.32 0.00 31.61 1.85
615 633 5.884322 ACCGGGACTAAAAATTAGACCTTT 58.116 37.500 6.32 2.01 31.61 3.11
616 634 5.509832 ACCGGGACTAAAAATTAGACCTT 57.490 39.130 6.32 2.27 31.61 3.50
617 635 5.509832 AACCGGGACTAAAAATTAGACCT 57.490 39.130 6.32 0.00 31.61 3.85
618 636 5.706833 TCAAACCGGGACTAAAAATTAGACC 59.293 40.000 6.32 9.27 0.00 3.85
619 637 6.652062 TCTCAAACCGGGACTAAAAATTAGAC 59.348 38.462 6.32 0.00 0.00 2.59
620 638 6.652062 GTCTCAAACCGGGACTAAAAATTAGA 59.348 38.462 6.32 0.00 0.00 2.10
621 639 6.428771 TGTCTCAAACCGGGACTAAAAATTAG 59.571 38.462 6.32 0.00 0.00 1.73
622 640 6.205270 GTGTCTCAAACCGGGACTAAAAATTA 59.795 38.462 6.32 0.00 0.00 1.40
623 641 5.009310 GTGTCTCAAACCGGGACTAAAAATT 59.991 40.000 6.32 0.00 0.00 1.82
624 642 4.517832 GTGTCTCAAACCGGGACTAAAAAT 59.482 41.667 6.32 0.00 0.00 1.82
625 643 3.878699 GTGTCTCAAACCGGGACTAAAAA 59.121 43.478 6.32 0.00 0.00 1.94
626 644 3.469739 GTGTCTCAAACCGGGACTAAAA 58.530 45.455 6.32 0.00 0.00 1.52
627 645 2.546373 CGTGTCTCAAACCGGGACTAAA 60.546 50.000 6.32 0.00 0.00 1.85
628 646 1.000060 CGTGTCTCAAACCGGGACTAA 60.000 52.381 6.32 0.00 0.00 2.24
629 647 0.599558 CGTGTCTCAAACCGGGACTA 59.400 55.000 6.32 0.00 0.00 2.59
630 648 1.111116 TCGTGTCTCAAACCGGGACT 61.111 55.000 6.32 0.00 0.00 3.85
631 649 0.249573 TTCGTGTCTCAAACCGGGAC 60.250 55.000 6.32 3.26 0.00 4.46
632 650 0.249573 GTTCGTGTCTCAAACCGGGA 60.250 55.000 6.32 0.00 0.00 5.14
633 651 1.226030 GGTTCGTGTCTCAAACCGGG 61.226 60.000 6.32 0.00 33.68 5.73
634 652 0.531090 TGGTTCGTGTCTCAAACCGG 60.531 55.000 0.00 0.00 44.39 5.28
635 653 0.859232 CTGGTTCGTGTCTCAAACCG 59.141 55.000 0.00 0.00 44.39 4.44
636 654 1.202604 TCCTGGTTCGTGTCTCAAACC 60.203 52.381 0.00 0.00 42.28 3.27
637 655 1.865340 GTCCTGGTTCGTGTCTCAAAC 59.135 52.381 0.00 0.00 0.00 2.93
638 656 1.760613 AGTCCTGGTTCGTGTCTCAAA 59.239 47.619 0.00 0.00 0.00 2.69
639 657 1.410004 AGTCCTGGTTCGTGTCTCAA 58.590 50.000 0.00 0.00 0.00 3.02
640 658 2.281539 TAGTCCTGGTTCGTGTCTCA 57.718 50.000 0.00 0.00 0.00 3.27
641 659 3.576648 CTTTAGTCCTGGTTCGTGTCTC 58.423 50.000 0.00 0.00 0.00 3.36
642 660 2.299297 CCTTTAGTCCTGGTTCGTGTCT 59.701 50.000 0.00 0.00 0.00 3.41
643 661 2.612221 CCCTTTAGTCCTGGTTCGTGTC 60.612 54.545 0.00 0.00 0.00 3.67
644 662 1.346722 CCCTTTAGTCCTGGTTCGTGT 59.653 52.381 0.00 0.00 0.00 4.49
645 663 1.944430 GCCCTTTAGTCCTGGTTCGTG 60.944 57.143 0.00 0.00 0.00 4.35
646 664 0.323957 GCCCTTTAGTCCTGGTTCGT 59.676 55.000 0.00 0.00 0.00 3.85
647 665 0.323629 TGCCCTTTAGTCCTGGTTCG 59.676 55.000 0.00 0.00 0.00 3.95
648 666 1.822506 GTGCCCTTTAGTCCTGGTTC 58.177 55.000 0.00 0.00 0.00 3.62
649 667 0.036306 CGTGCCCTTTAGTCCTGGTT 59.964 55.000 0.00 0.00 0.00 3.67
650 668 1.125711 ACGTGCCCTTTAGTCCTGGT 61.126 55.000 0.00 0.00 0.00 4.00
651 669 0.391263 GACGTGCCCTTTAGTCCTGG 60.391 60.000 0.00 0.00 0.00 4.45
652 670 0.391263 GGACGTGCCCTTTAGTCCTG 60.391 60.000 0.00 0.00 46.99 3.86
653 671 1.980844 GGACGTGCCCTTTAGTCCT 59.019 57.895 0.00 0.00 46.99 3.85
654 672 4.611961 GGACGTGCCCTTTAGTCC 57.388 61.111 0.00 0.00 45.07 3.85
668 686 0.249573 TTTGAGACACGAACCGGGAC 60.250 55.000 6.32 0.00 32.98 4.46
669 687 0.249573 GTTTGAGACACGAACCGGGA 60.250 55.000 6.32 0.00 37.02 5.14
670 688 2.231820 GTTTGAGACACGAACCGGG 58.768 57.895 6.32 0.00 37.02 5.73
674 692 0.249573 TCCCGGTTTGAGACACGAAC 60.250 55.000 0.00 0.00 40.95 3.95
675 693 0.249573 GTCCCGGTTTGAGACACGAA 60.250 55.000 0.00 0.00 0.00 3.85
676 694 1.111116 AGTCCCGGTTTGAGACACGA 61.111 55.000 9.96 0.00 32.82 4.35
677 695 0.599558 TAGTCCCGGTTTGAGACACG 59.400 55.000 9.96 0.00 32.82 4.49
678 696 2.825861 TTAGTCCCGGTTTGAGACAC 57.174 50.000 9.96 0.00 32.82 3.67
679 697 2.027561 CCATTAGTCCCGGTTTGAGACA 60.028 50.000 9.96 0.00 32.82 3.41
680 698 2.629051 CCATTAGTCCCGGTTTGAGAC 58.371 52.381 0.00 0.00 0.00 3.36
681 699 1.065709 GCCATTAGTCCCGGTTTGAGA 60.066 52.381 0.00 0.00 0.00 3.27
682 700 1.065418 AGCCATTAGTCCCGGTTTGAG 60.065 52.381 0.00 0.00 0.00 3.02
683 701 0.988832 AGCCATTAGTCCCGGTTTGA 59.011 50.000 0.00 0.00 0.00 2.69
684 702 1.834188 AAGCCATTAGTCCCGGTTTG 58.166 50.000 0.00 0.00 0.00 2.93
685 703 2.597578 AAAGCCATTAGTCCCGGTTT 57.402 45.000 0.00 0.00 0.00 3.27
686 704 2.682858 GCTAAAGCCATTAGTCCCGGTT 60.683 50.000 0.00 0.00 42.58 4.44
687 705 1.134189 GCTAAAGCCATTAGTCCCGGT 60.134 52.381 0.00 0.00 42.58 5.28
688 706 1.594331 GCTAAAGCCATTAGTCCCGG 58.406 55.000 0.00 0.00 42.58 5.73
700 718 0.042100 GCATTACGAGCGGCTAAAGC 60.042 55.000 0.60 0.00 41.14 3.51
701 719 1.286501 TGCATTACGAGCGGCTAAAG 58.713 50.000 0.60 0.00 33.85 1.85
702 720 1.395608 GTTGCATTACGAGCGGCTAAA 59.604 47.619 0.60 0.00 33.85 1.85
703 721 1.003851 GTTGCATTACGAGCGGCTAA 58.996 50.000 0.60 0.00 33.85 3.09
704 722 0.808453 GGTTGCATTACGAGCGGCTA 60.808 55.000 0.60 0.00 33.85 3.93
705 723 2.106683 GGTTGCATTACGAGCGGCT 61.107 57.895 0.00 0.00 33.85 5.52
706 724 2.403586 GGTTGCATTACGAGCGGC 59.596 61.111 0.00 0.00 33.85 6.53
709 727 1.448893 TCCCGGTTGCATTACGAGC 60.449 57.895 0.00 0.00 0.00 5.03
710 728 0.108329 AGTCCCGGTTGCATTACGAG 60.108 55.000 0.00 0.00 0.00 4.18
711 729 1.184431 TAGTCCCGGTTGCATTACGA 58.816 50.000 0.00 0.00 0.00 3.43
712 730 2.012937 TTAGTCCCGGTTGCATTACG 57.987 50.000 0.00 0.00 0.00 3.18
713 731 3.064820 CACATTAGTCCCGGTTGCATTAC 59.935 47.826 0.00 0.00 0.00 1.89
714 732 3.055021 TCACATTAGTCCCGGTTGCATTA 60.055 43.478 0.00 0.00 0.00 1.90
715 733 2.091541 CACATTAGTCCCGGTTGCATT 58.908 47.619 0.00 0.00 0.00 3.56
716 734 1.280710 TCACATTAGTCCCGGTTGCAT 59.719 47.619 0.00 0.00 0.00 3.96
717 735 0.687920 TCACATTAGTCCCGGTTGCA 59.312 50.000 0.00 0.00 0.00 4.08
718 736 1.737793 CTTCACATTAGTCCCGGTTGC 59.262 52.381 0.00 0.00 0.00 4.17
719 737 3.000727 GTCTTCACATTAGTCCCGGTTG 58.999 50.000 0.00 0.00 0.00 3.77
720 738 2.904434 AGTCTTCACATTAGTCCCGGTT 59.096 45.455 0.00 0.00 0.00 4.44
721 739 2.537143 AGTCTTCACATTAGTCCCGGT 58.463 47.619 0.00 0.00 0.00 5.28
722 740 4.730949 TTAGTCTTCACATTAGTCCCGG 57.269 45.455 0.00 0.00 0.00 5.73
723 741 4.567159 GCTTTAGTCTTCACATTAGTCCCG 59.433 45.833 0.00 0.00 0.00 5.14
724 742 4.876679 GGCTTTAGTCTTCACATTAGTCCC 59.123 45.833 0.00 0.00 0.00 4.46
725 743 4.876679 GGGCTTTAGTCTTCACATTAGTCC 59.123 45.833 0.00 0.00 0.00 3.85
726 744 5.582665 CAGGGCTTTAGTCTTCACATTAGTC 59.417 44.000 0.00 0.00 0.00 2.59
727 745 5.013183 ACAGGGCTTTAGTCTTCACATTAGT 59.987 40.000 0.00 0.00 0.00 2.24
728 746 5.491982 ACAGGGCTTTAGTCTTCACATTAG 58.508 41.667 0.00 0.00 0.00 1.73
729 747 5.499004 ACAGGGCTTTAGTCTTCACATTA 57.501 39.130 0.00 0.00 0.00 1.90
730 748 4.373156 ACAGGGCTTTAGTCTTCACATT 57.627 40.909 0.00 0.00 0.00 2.71
731 749 4.373156 AACAGGGCTTTAGTCTTCACAT 57.627 40.909 0.00 0.00 0.00 3.21
732 750 3.857157 AACAGGGCTTTAGTCTTCACA 57.143 42.857 0.00 0.00 0.00 3.58
733 751 4.822350 AGAAAACAGGGCTTTAGTCTTCAC 59.178 41.667 0.00 0.00 0.00 3.18
734 752 5.048846 AGAAAACAGGGCTTTAGTCTTCA 57.951 39.130 0.00 0.00 0.00 3.02
735 753 6.231951 AGTAGAAAACAGGGCTTTAGTCTTC 58.768 40.000 0.00 0.00 0.00 2.87
736 754 6.189036 AGTAGAAAACAGGGCTTTAGTCTT 57.811 37.500 0.00 0.00 0.00 3.01
737 755 5.827326 AGTAGAAAACAGGGCTTTAGTCT 57.173 39.130 0.00 0.00 0.00 3.24
738 756 5.581479 GCTAGTAGAAAACAGGGCTTTAGTC 59.419 44.000 0.00 0.00 0.00 2.59
739 757 5.489249 GCTAGTAGAAAACAGGGCTTTAGT 58.511 41.667 0.00 0.00 0.00 2.24
740 758 4.567159 CGCTAGTAGAAAACAGGGCTTTAG 59.433 45.833 0.00 0.00 0.00 1.85
741 759 4.020839 ACGCTAGTAGAAAACAGGGCTTTA 60.021 41.667 0.00 0.00 0.00 1.85
742 760 3.244457 ACGCTAGTAGAAAACAGGGCTTT 60.244 43.478 0.00 0.00 0.00 3.51
743 761 2.302157 ACGCTAGTAGAAAACAGGGCTT 59.698 45.455 0.00 0.00 0.00 4.35
744 762 1.900486 ACGCTAGTAGAAAACAGGGCT 59.100 47.619 0.00 0.00 0.00 5.19
745 763 2.000447 CACGCTAGTAGAAAACAGGGC 59.000 52.381 0.00 0.00 0.00 5.19
746 764 2.232941 TCCACGCTAGTAGAAAACAGGG 59.767 50.000 0.00 0.00 0.00 4.45
747 765 3.251571 GTCCACGCTAGTAGAAAACAGG 58.748 50.000 0.00 0.00 0.00 4.00
748 766 2.915463 CGTCCACGCTAGTAGAAAACAG 59.085 50.000 0.00 0.00 0.00 3.16
749 767 2.352030 CCGTCCACGCTAGTAGAAAACA 60.352 50.000 0.00 0.00 38.18 2.83
750 768 2.095059 TCCGTCCACGCTAGTAGAAAAC 60.095 50.000 0.00 0.00 38.18 2.43
751 769 2.161855 TCCGTCCACGCTAGTAGAAAA 58.838 47.619 0.00 0.00 38.18 2.29
752 770 1.741706 CTCCGTCCACGCTAGTAGAAA 59.258 52.381 0.00 0.00 38.18 2.52
753 771 1.376543 CTCCGTCCACGCTAGTAGAA 58.623 55.000 0.00 0.00 38.18 2.10
754 772 1.094073 GCTCCGTCCACGCTAGTAGA 61.094 60.000 0.00 0.00 38.18 2.59
755 773 1.355916 GCTCCGTCCACGCTAGTAG 59.644 63.158 0.00 0.00 38.18 2.57
756 774 2.117156 GGCTCCGTCCACGCTAGTA 61.117 63.158 0.00 0.00 38.18 1.82
757 775 3.450115 GGCTCCGTCCACGCTAGT 61.450 66.667 0.00 0.00 38.18 2.57
758 776 3.449227 TGGCTCCGTCCACGCTAG 61.449 66.667 0.00 0.00 38.18 3.42
759 777 3.755628 GTGGCTCCGTCCACGCTA 61.756 66.667 3.49 0.00 45.95 4.26
764 782 1.980232 ATGTACGTGGCTCCGTCCA 60.980 57.895 0.00 2.42 42.00 4.02
765 783 1.518572 CATGTACGTGGCTCCGTCC 60.519 63.158 7.22 0.00 42.00 4.79
766 784 2.165301 GCATGTACGTGGCTCCGTC 61.165 63.158 16.68 0.00 42.00 4.79
767 785 2.125673 GCATGTACGTGGCTCCGT 60.126 61.111 16.68 7.82 44.50 4.69
768 786 2.125713 TGCATGTACGTGGCTCCG 60.126 61.111 16.68 0.00 0.00 4.63
769 787 2.452813 CGTGCATGTACGTGGCTCC 61.453 63.158 25.67 0.64 39.13 4.70
770 788 3.081133 CGTGCATGTACGTGGCTC 58.919 61.111 25.67 8.78 39.13 4.70
777 795 3.544048 CGATTGATCCAACGTGCATGTAC 60.544 47.826 12.96 3.51 0.00 2.90
779 797 1.398041 CGATTGATCCAACGTGCATGT 59.602 47.619 5.51 5.51 0.00 3.21
811 829 2.538861 GAGACATGTGACGCATCATGAG 59.461 50.000 1.15 0.00 42.52 2.90
824 842 1.935799 ACAGCCAGAGAGAGACATGT 58.064 50.000 0.00 0.00 0.00 3.21
827 845 0.884514 CGAACAGCCAGAGAGAGACA 59.115 55.000 0.00 0.00 0.00 3.41
903 922 4.510340 TCTCATTTGATGATGCAGTCGATG 59.490 41.667 0.00 0.26 38.85 3.84
914 933 7.008332 AGGGCATATCATTTCTCATTTGATGA 58.992 34.615 0.00 0.00 37.76 2.92
938 957 1.381872 AGGGGAGGACATGACGGAG 60.382 63.158 0.00 0.00 0.00 4.63
939 958 1.381327 GAGGGGAGGACATGACGGA 60.381 63.158 0.00 0.00 0.00 4.69
940 959 2.435693 GGAGGGGAGGACATGACGG 61.436 68.421 0.00 0.00 0.00 4.79
941 960 2.435693 GGGAGGGGAGGACATGACG 61.436 68.421 0.00 0.00 0.00 4.35
945 964 4.499116 CCGGGGAGGGGAGGACAT 62.499 72.222 0.00 0.00 35.97 3.06
947 966 3.752816 CTACCGGGGAGGGGAGGAC 62.753 73.684 6.32 0.00 46.96 3.85
976 1194 2.442272 GCGGAGAGAGGGCCTACA 60.442 66.667 5.73 0.00 0.00 2.74
984 1202 3.827898 GGTCACGGGCGGAGAGAG 61.828 72.222 0.00 0.00 0.00 3.20
1027 1245 3.118454 CTGCCGCCGTCGTTGATT 61.118 61.111 0.00 0.00 0.00 2.57
1075 1293 4.201970 GGAGTAATCAGTGGAGAAGACTCG 60.202 50.000 0.00 0.00 43.44 4.18
1129 1347 3.555956 TGTTCGAACTGAAGCAGAAAGAC 59.444 43.478 27.32 0.00 37.23 3.01
1155 1373 2.635915 ACTTGTCACGGAATTACCCTCA 59.364 45.455 0.00 0.00 34.64 3.86
1161 1379 3.587923 CGGGTTACTTGTCACGGAATTA 58.412 45.455 0.00 0.00 0.00 1.40
1426 1648 3.763897 GGAGCCAAGAATAAAAGAAGCCA 59.236 43.478 0.00 0.00 0.00 4.75
1535 1757 3.722147 CTTCATAGTCGTCCCATTCCTG 58.278 50.000 0.00 0.00 0.00 3.86
1915 2234 1.929494 AGGACAGGGGGCATTATTTCA 59.071 47.619 0.00 0.00 0.00 2.69
2222 2544 5.683876 TTCTGAATAGGGAGAAGGTTCTG 57.316 43.478 0.00 0.00 37.73 3.02
2819 3297 6.842437 TTGCACCAAACCAGCTATTAATAA 57.158 33.333 0.00 0.00 0.00 1.40
2897 3375 0.250727 ACGCATGCCACTTAACACCT 60.251 50.000 13.15 0.00 0.00 4.00
3072 3554 1.816224 GAAGAGGCGGCAAACCAAATA 59.184 47.619 13.08 0.00 34.57 1.40
3099 3581 3.397482 CCTCTAGTGTGAGGCAATATGC 58.603 50.000 0.00 0.00 45.84 3.14
3176 3658 4.766404 AAATTTGGTGATTCCTGACGTC 57.234 40.909 9.11 9.11 37.07 4.34
3249 3731 2.033448 ATTGCGTTGCGGGGAGAA 59.967 55.556 0.00 0.00 0.00 2.87
3304 3787 1.095228 AATCGTCCCATTTCGCGCAT 61.095 50.000 8.75 0.00 0.00 4.73
3309 3792 1.094785 AGGCAAATCGTCCCATTTCG 58.905 50.000 0.00 0.00 0.00 3.46
3314 3797 4.734652 GGAAGGCAAATCGTCCCA 57.265 55.556 0.00 0.00 30.65 4.37
3331 3814 1.373371 GCAAAAGGGCAGCGAAAGG 60.373 57.895 0.00 0.00 0.00 3.11
3342 3825 3.373565 GCCCGTCCCAGCAAAAGG 61.374 66.667 0.00 0.00 0.00 3.11
3349 3832 0.541863 AGTCATTAAGCCCGTCCCAG 59.458 55.000 0.00 0.00 0.00 4.45
3401 3884 5.734031 AGCTTGGAGTATTTATTTCCCCT 57.266 39.130 0.00 0.00 0.00 4.79
3406 3891 9.681062 TTACTAGCAAGCTTGGAGTATTTATTT 57.319 29.630 27.10 0.00 0.00 1.40
3407 3892 9.331282 CTTACTAGCAAGCTTGGAGTATTTATT 57.669 33.333 27.10 0.00 0.00 1.40
3429 3914 9.989869 GTCAATTTTAATACCAGAAGAGCTTAC 57.010 33.333 0.00 0.00 0.00 2.34
3474 3959 7.092137 TCAGTATGAGAATTTCTGCCAAATG 57.908 36.000 3.03 0.00 42.56 2.32
3532 4019 1.722636 CCTCCGCCTCCGTGTAGTAC 61.723 65.000 0.00 0.00 0.00 2.73
3540 4027 2.262915 GATATGCCTCCGCCTCCG 59.737 66.667 0.00 0.00 0.00 4.63
3561 4048 5.396772 CCCTTGCACCATTCTATAGAGTCAA 60.397 44.000 2.02 0.54 0.00 3.18
3583 4070 5.407407 TCAAACTCTTCTCATACTCACCC 57.593 43.478 0.00 0.00 0.00 4.61
3603 4090 2.048597 CCGCACGTAACCTGCTCA 60.049 61.111 0.00 0.00 32.03 4.26
3618 4105 1.453155 AACCAAATAGCAGAGCACCG 58.547 50.000 0.00 0.00 0.00 4.94
3654 4141 4.161377 AGACTGGAGCCTTCTTTGTCTATC 59.839 45.833 0.00 0.00 32.44 2.08
3661 4148 3.785364 ACTCTAGACTGGAGCCTTCTTT 58.215 45.455 15.25 0.00 34.46 2.52
3668 4155 2.955660 ACATGCTACTCTAGACTGGAGC 59.044 50.000 15.25 8.89 34.46 4.70
3671 4158 2.946329 ACGACATGCTACTCTAGACTGG 59.054 50.000 0.00 0.00 0.00 4.00
3679 4166 3.854809 GTCTGAAGAACGACATGCTACTC 59.145 47.826 0.00 0.00 0.00 2.59
3680 4167 3.670895 CGTCTGAAGAACGACATGCTACT 60.671 47.826 0.00 0.00 0.00 2.57
3695 4182 2.559668 CCTGTACCTGTAACCGTCTGAA 59.440 50.000 0.00 0.00 0.00 3.02
3696 4183 2.165167 CCTGTACCTGTAACCGTCTGA 58.835 52.381 0.00 0.00 0.00 3.27
3697 4184 1.891150 ACCTGTACCTGTAACCGTCTG 59.109 52.381 0.00 0.00 0.00 3.51
3698 4185 2.299326 ACCTGTACCTGTAACCGTCT 57.701 50.000 0.00 0.00 0.00 4.18
3699 4186 2.297033 TGAACCTGTACCTGTAACCGTC 59.703 50.000 0.00 0.00 0.00 4.79
3700 4187 2.318908 TGAACCTGTACCTGTAACCGT 58.681 47.619 0.00 0.00 0.00 4.83
3701 4188 3.389925 TTGAACCTGTACCTGTAACCG 57.610 47.619 0.00 0.00 0.00 4.44
3702 4189 4.453751 TGTTTGAACCTGTACCTGTAACC 58.546 43.478 0.00 0.00 0.00 2.85
3703 4190 5.121105 ACTGTTTGAACCTGTACCTGTAAC 58.879 41.667 0.00 0.00 0.00 2.50
3704 4191 5.362105 ACTGTTTGAACCTGTACCTGTAA 57.638 39.130 0.00 0.00 0.00 2.41
3705 4192 5.129815 AGAACTGTTTGAACCTGTACCTGTA 59.870 40.000 0.00 0.00 0.00 2.74
3706 4193 3.926058 ACTGTTTGAACCTGTACCTGT 57.074 42.857 0.00 0.00 0.00 4.00
3707 4194 4.451900 AGAACTGTTTGAACCTGTACCTG 58.548 43.478 0.00 0.00 0.00 4.00
3708 4195 4.409247 AGAGAACTGTTTGAACCTGTACCT 59.591 41.667 0.00 0.00 0.00 3.08
3709 4196 4.511826 CAGAGAACTGTTTGAACCTGTACC 59.488 45.833 0.00 0.00 39.11 3.34
3710 4197 5.659048 CAGAGAACTGTTTGAACCTGTAC 57.341 43.478 0.00 0.00 39.11 2.90
3739 4226 4.698780 GGTCAAACAGTACCATTTCCTACC 59.301 45.833 0.00 0.00 35.73 3.18
3775 4262 1.812571 CCACTTCCTGGTGCACATTAC 59.187 52.381 20.43 0.95 34.90 1.89
3795 4282 3.541632 TCTCGGGCAGGACAAATAATTC 58.458 45.455 0.00 0.00 0.00 2.17
3805 4292 5.544176 AGATCTTTATAAATCTCGGGCAGGA 59.456 40.000 0.00 0.00 0.00 3.86
3873 4360 6.272318 CAAACAATTTCACTTCCTGCTGTTA 58.728 36.000 0.00 0.00 0.00 2.41
3880 4367 4.202151 GCAGACCAAACAATTTCACTTCCT 60.202 41.667 0.00 0.00 0.00 3.36
3881 4368 4.051237 GCAGACCAAACAATTTCACTTCC 58.949 43.478 0.00 0.00 0.00 3.46
3882 4369 4.504097 GTGCAGACCAAACAATTTCACTTC 59.496 41.667 0.00 0.00 0.00 3.01
3883 4370 4.432712 GTGCAGACCAAACAATTTCACTT 58.567 39.130 0.00 0.00 0.00 3.16
3884 4371 3.181476 GGTGCAGACCAAACAATTTCACT 60.181 43.478 0.00 0.00 42.59 3.41
3885 4372 3.123050 GGTGCAGACCAAACAATTTCAC 58.877 45.455 0.00 0.00 42.59 3.18
3886 4373 2.102252 GGGTGCAGACCAAACAATTTCA 59.898 45.455 2.54 0.00 45.25 2.69
3887 4374 2.547855 GGGGTGCAGACCAAACAATTTC 60.548 50.000 9.41 0.00 45.25 2.17
3888 4375 1.416030 GGGGTGCAGACCAAACAATTT 59.584 47.619 9.41 0.00 45.25 1.82
3889 4376 1.047801 GGGGTGCAGACCAAACAATT 58.952 50.000 9.41 0.00 45.25 2.32
3890 4377 0.188342 AGGGGTGCAGACCAAACAAT 59.812 50.000 9.41 0.00 45.25 2.71
3891 4378 0.754957 CAGGGGTGCAGACCAAACAA 60.755 55.000 9.41 0.00 45.25 2.83
3892 4379 1.152777 CAGGGGTGCAGACCAAACA 60.153 57.895 9.41 0.00 45.25 2.83
3893 4380 0.467290 TTCAGGGGTGCAGACCAAAC 60.467 55.000 9.41 0.00 45.25 2.93
3894 4381 0.467290 GTTCAGGGGTGCAGACCAAA 60.467 55.000 9.41 1.04 45.25 3.28
3895 4382 1.150536 GTTCAGGGGTGCAGACCAA 59.849 57.895 9.41 0.00 45.25 3.67
3896 4383 2.829384 GGTTCAGGGGTGCAGACCA 61.829 63.158 9.41 0.00 45.25 4.02
3897 4384 2.034221 GGTTCAGGGGTGCAGACC 59.966 66.667 0.00 0.00 42.27 3.85
3898 4385 1.302832 CAGGTTCAGGGGTGCAGAC 60.303 63.158 0.00 0.00 0.00 3.51
3899 4386 1.461268 TCAGGTTCAGGGGTGCAGA 60.461 57.895 0.00 0.00 0.00 4.26
3900 4387 1.302832 GTCAGGTTCAGGGGTGCAG 60.303 63.158 0.00 0.00 0.00 4.41
3901 4388 2.055689 CTGTCAGGTTCAGGGGTGCA 62.056 60.000 0.00 0.00 0.00 4.57
3902 4389 1.302832 CTGTCAGGTTCAGGGGTGC 60.303 63.158 0.00 0.00 0.00 5.01
3903 4390 0.035458 GACTGTCAGGTTCAGGGGTG 59.965 60.000 4.53 0.00 37.25 4.61
3904 4391 0.104934 AGACTGTCAGGTTCAGGGGT 60.105 55.000 10.88 0.00 37.25 4.95
3905 4392 1.059913 AAGACTGTCAGGTTCAGGGG 58.940 55.000 10.88 0.00 37.25 4.79
3906 4393 2.938956 AAAGACTGTCAGGTTCAGGG 57.061 50.000 10.88 0.00 37.25 4.45
3929 4416 4.918810 ATTTCACTTCCTGTTGGACAAC 57.081 40.909 8.19 8.19 43.06 3.32
3930 4417 4.709397 ACAATTTCACTTCCTGTTGGACAA 59.291 37.500 0.00 0.00 43.06 3.18
3931 4418 4.277476 ACAATTTCACTTCCTGTTGGACA 58.723 39.130 0.00 0.00 43.06 4.02
3932 4419 4.918810 ACAATTTCACTTCCTGTTGGAC 57.081 40.909 0.00 0.00 43.06 4.02
3933 4420 5.420421 TCAAACAATTTCACTTCCTGTTGGA 59.580 36.000 0.00 0.00 41.36 3.53
3934 4421 5.519927 GTCAAACAATTTCACTTCCTGTTGG 59.480 40.000 0.00 0.00 30.90 3.77
3935 4422 5.519927 GGTCAAACAATTTCACTTCCTGTTG 59.480 40.000 0.00 0.00 30.90 3.33
3936 4423 5.186797 TGGTCAAACAATTTCACTTCCTGTT 59.813 36.000 0.00 0.00 0.00 3.16
3937 4424 4.709397 TGGTCAAACAATTTCACTTCCTGT 59.291 37.500 0.00 0.00 0.00 4.00
3938 4425 5.261209 TGGTCAAACAATTTCACTTCCTG 57.739 39.130 0.00 0.00 0.00 3.86
3939 4426 4.202151 GCTGGTCAAACAATTTCACTTCCT 60.202 41.667 0.00 0.00 0.00 3.36
3940 4427 4.051237 GCTGGTCAAACAATTTCACTTCC 58.949 43.478 0.00 0.00 0.00 3.46
3941 4428 4.936891 AGCTGGTCAAACAATTTCACTTC 58.063 39.130 0.00 0.00 0.00 3.01
3942 4429 6.463995 TTAGCTGGTCAAACAATTTCACTT 57.536 33.333 0.00 0.00 0.00 3.16
3943 4430 6.655078 ATTAGCTGGTCAAACAATTTCACT 57.345 33.333 0.00 0.00 0.00 3.41
3944 4431 8.863049 CATTATTAGCTGGTCAAACAATTTCAC 58.137 33.333 0.00 0.00 0.00 3.18
3945 4432 7.545265 GCATTATTAGCTGGTCAAACAATTTCA 59.455 33.333 0.00 0.00 0.00 2.69
3946 4433 7.545265 TGCATTATTAGCTGGTCAAACAATTTC 59.455 33.333 0.00 0.00 0.00 2.17
3947 4434 7.385267 TGCATTATTAGCTGGTCAAACAATTT 58.615 30.769 0.00 0.00 0.00 1.82
3948 4435 6.934056 TGCATTATTAGCTGGTCAAACAATT 58.066 32.000 0.00 0.00 0.00 2.32
3949 4436 6.528537 TGCATTATTAGCTGGTCAAACAAT 57.471 33.333 0.00 0.00 0.00 2.71
3950 4437 5.973899 TGCATTATTAGCTGGTCAAACAA 57.026 34.783 0.00 0.00 0.00 2.83
3951 4438 5.651576 TCATGCATTATTAGCTGGTCAAACA 59.348 36.000 0.00 0.00 0.00 2.83
3952 4439 6.135290 TCATGCATTATTAGCTGGTCAAAC 57.865 37.500 0.00 0.00 0.00 2.93
3953 4440 6.964807 ATCATGCATTATTAGCTGGTCAAA 57.035 33.333 0.00 0.00 0.00 2.69
3954 4441 6.964807 AATCATGCATTATTAGCTGGTCAA 57.035 33.333 4.26 0.00 0.00 3.18
3955 4442 6.656270 CCTAATCATGCATTATTAGCTGGTCA 59.344 38.462 25.57 2.79 35.33 4.02
3956 4443 6.094603 CCCTAATCATGCATTATTAGCTGGTC 59.905 42.308 25.57 0.00 35.33 4.02
3957 4444 5.948162 CCCTAATCATGCATTATTAGCTGGT 59.052 40.000 25.57 0.00 35.33 4.00
3958 4445 5.359009 CCCCTAATCATGCATTATTAGCTGG 59.641 44.000 25.57 23.09 35.33 4.85
3959 4446 6.182627 TCCCCTAATCATGCATTATTAGCTG 58.817 40.000 25.57 19.89 35.33 4.24
3960 4447 6.392911 TCCCCTAATCATGCATTATTAGCT 57.607 37.500 25.57 0.00 35.33 3.32
3961 4448 7.466746 TTTCCCCTAATCATGCATTATTAGC 57.533 36.000 25.57 0.00 35.33 3.09
3962 4449 8.031277 GCTTTTCCCCTAATCATGCATTATTAG 58.969 37.037 24.61 24.61 36.07 1.73
3963 4450 7.508636 TGCTTTTCCCCTAATCATGCATTATTA 59.491 33.333 11.78 11.78 0.00 0.98
3964 4451 6.327104 TGCTTTTCCCCTAATCATGCATTATT 59.673 34.615 10.77 10.77 0.00 1.40
3965 4452 5.840149 TGCTTTTCCCCTAATCATGCATTAT 59.160 36.000 0.00 0.00 0.00 1.28
3966 4453 5.207354 TGCTTTTCCCCTAATCATGCATTA 58.793 37.500 0.00 0.00 0.00 1.90
3967 4454 4.032310 TGCTTTTCCCCTAATCATGCATT 58.968 39.130 0.00 0.00 0.00 3.56
3968 4455 3.645434 TGCTTTTCCCCTAATCATGCAT 58.355 40.909 0.00 0.00 0.00 3.96
3969 4456 3.098774 TGCTTTTCCCCTAATCATGCA 57.901 42.857 0.00 0.00 0.00 3.96
3970 4457 4.374399 CAATGCTTTTCCCCTAATCATGC 58.626 43.478 0.00 0.00 0.00 4.06
3971 4458 4.202284 CCCAATGCTTTTCCCCTAATCATG 60.202 45.833 0.00 0.00 0.00 3.07
3972 4459 3.969312 CCCAATGCTTTTCCCCTAATCAT 59.031 43.478 0.00 0.00 0.00 2.45
3973 4460 3.012274 TCCCAATGCTTTTCCCCTAATCA 59.988 43.478 0.00 0.00 0.00 2.57
3974 4461 3.384789 GTCCCAATGCTTTTCCCCTAATC 59.615 47.826 0.00 0.00 0.00 1.75
3975 4462 3.374764 GTCCCAATGCTTTTCCCCTAAT 58.625 45.455 0.00 0.00 0.00 1.73
3976 4463 2.815158 GTCCCAATGCTTTTCCCCTAA 58.185 47.619 0.00 0.00 0.00 2.69
3977 4464 1.340600 CGTCCCAATGCTTTTCCCCTA 60.341 52.381 0.00 0.00 0.00 3.53
3978 4465 0.611896 CGTCCCAATGCTTTTCCCCT 60.612 55.000 0.00 0.00 0.00 4.79
3979 4466 0.898326 ACGTCCCAATGCTTTTCCCC 60.898 55.000 0.00 0.00 0.00 4.81
3980 4467 0.243636 CACGTCCCAATGCTTTTCCC 59.756 55.000 0.00 0.00 0.00 3.97
3981 4468 0.243636 CCACGTCCCAATGCTTTTCC 59.756 55.000 0.00 0.00 0.00 3.13
3982 4469 0.388520 GCCACGTCCCAATGCTTTTC 60.389 55.000 0.00 0.00 0.00 2.29
3983 4470 1.665442 GCCACGTCCCAATGCTTTT 59.335 52.632 0.00 0.00 0.00 2.27
3984 4471 2.625823 CGCCACGTCCCAATGCTTT 61.626 57.895 0.00 0.00 0.00 3.51
3985 4472 2.819984 ATCGCCACGTCCCAATGCTT 62.820 55.000 0.00 0.00 0.00 3.91
3986 4473 3.329542 ATCGCCACGTCCCAATGCT 62.330 57.895 0.00 0.00 0.00 3.79
3987 4474 2.823829 GATCGCCACGTCCCAATGC 61.824 63.158 0.00 0.00 0.00 3.56
3988 4475 0.744414 AAGATCGCCACGTCCCAATG 60.744 55.000 0.00 0.00 0.00 2.82
3989 4476 0.462047 GAAGATCGCCACGTCCCAAT 60.462 55.000 0.00 0.00 0.00 3.16
3990 4477 1.079405 GAAGATCGCCACGTCCCAA 60.079 57.895 0.00 0.00 0.00 4.12
3991 4478 1.982395 AGAAGATCGCCACGTCCCA 60.982 57.895 0.00 0.00 0.00 4.37
3992 4479 1.519455 CAGAAGATCGCCACGTCCC 60.519 63.158 0.00 0.00 0.00 4.46
3993 4480 0.454600 TACAGAAGATCGCCACGTCC 59.545 55.000 0.00 0.00 0.00 4.79
3994 4481 2.120232 CATACAGAAGATCGCCACGTC 58.880 52.381 0.00 0.00 0.00 4.34
3995 4482 1.802880 GCATACAGAAGATCGCCACGT 60.803 52.381 0.00 0.00 0.00 4.49
3996 4483 0.855349 GCATACAGAAGATCGCCACG 59.145 55.000 0.00 0.00 0.00 4.94
3997 4484 1.221414 GGCATACAGAAGATCGCCAC 58.779 55.000 0.00 0.00 39.38 5.01
3998 4485 0.106708 GGGCATACAGAAGATCGCCA 59.893 55.000 0.00 0.00 41.41 5.69
3999 4486 0.106708 TGGGCATACAGAAGATCGCC 59.893 55.000 0.00 0.00 38.85 5.54
4000 4487 1.506493 CTGGGCATACAGAAGATCGC 58.494 55.000 0.00 0.00 40.97 4.58
4001 4488 1.506493 GCTGGGCATACAGAAGATCG 58.494 55.000 6.49 0.00 40.97 3.69
4002 4489 1.544314 GGGCTGGGCATACAGAAGATC 60.544 57.143 6.49 0.00 40.97 2.75
4003 4490 0.475906 GGGCTGGGCATACAGAAGAT 59.524 55.000 6.49 0.00 40.97 2.40
4004 4491 0.621571 AGGGCTGGGCATACAGAAGA 60.622 55.000 6.49 0.00 40.97 2.87
4005 4492 0.465097 CAGGGCTGGGCATACAGAAG 60.465 60.000 6.49 0.00 40.97 2.85
4006 4493 1.207488 ACAGGGCTGGGCATACAGAA 61.207 55.000 6.49 0.00 40.97 3.02
4007 4494 1.207488 AACAGGGCTGGGCATACAGA 61.207 55.000 6.49 0.00 40.97 3.41
4008 4495 1.033746 CAACAGGGCTGGGCATACAG 61.034 60.000 0.00 0.00 41.41 2.74
4009 4496 1.001020 CAACAGGGCTGGGCATACA 60.001 57.895 0.00 0.00 34.19 2.29
4010 4497 2.418083 GCAACAGGGCTGGGCATAC 61.418 63.158 0.00 0.00 35.82 2.39
4011 4498 2.044053 GCAACAGGGCTGGGCATA 60.044 61.111 0.00 0.00 35.82 3.14
4012 4499 3.988678 AGCAACAGGGCTGGGCAT 61.989 61.111 0.00 0.00 43.89 4.40
4028 4515 3.686241 TGCTTGTTGTAGAGCTAATGCAG 59.314 43.478 0.00 0.00 42.74 4.41
4029 4516 3.673902 TGCTTGTTGTAGAGCTAATGCA 58.326 40.909 0.00 0.00 42.74 3.96
4030 4517 4.333649 TGATGCTTGTTGTAGAGCTAATGC 59.666 41.667 0.00 0.00 39.60 3.56
4031 4518 5.583854 ACTGATGCTTGTTGTAGAGCTAATG 59.416 40.000 0.00 0.00 39.60 1.90
4032 4519 5.583854 CACTGATGCTTGTTGTAGAGCTAAT 59.416 40.000 0.00 0.00 39.60 1.73
4033 4520 4.931601 CACTGATGCTTGTTGTAGAGCTAA 59.068 41.667 0.00 0.00 39.60 3.09
4034 4521 4.498241 CACTGATGCTTGTTGTAGAGCTA 58.502 43.478 0.00 0.00 39.60 3.32
4035 4522 3.332919 CACTGATGCTTGTTGTAGAGCT 58.667 45.455 0.00 0.00 39.60 4.09
4036 4523 2.417933 CCACTGATGCTTGTTGTAGAGC 59.582 50.000 0.00 0.00 39.33 4.09
4037 4524 3.681897 GTCCACTGATGCTTGTTGTAGAG 59.318 47.826 0.00 0.00 0.00 2.43
4038 4525 3.070878 TGTCCACTGATGCTTGTTGTAGA 59.929 43.478 0.00 0.00 0.00 2.59
4039 4526 3.402110 TGTCCACTGATGCTTGTTGTAG 58.598 45.455 0.00 0.00 0.00 2.74
4040 4527 3.070878 TCTGTCCACTGATGCTTGTTGTA 59.929 43.478 0.00 0.00 0.00 2.41
4041 4528 2.158769 TCTGTCCACTGATGCTTGTTGT 60.159 45.455 0.00 0.00 0.00 3.32
4042 4529 2.483106 CTCTGTCCACTGATGCTTGTTG 59.517 50.000 0.00 0.00 0.00 3.33
4043 4530 2.551721 CCTCTGTCCACTGATGCTTGTT 60.552 50.000 0.00 0.00 0.00 2.83
4044 4531 1.002888 CCTCTGTCCACTGATGCTTGT 59.997 52.381 0.00 0.00 0.00 3.16
4045 4532 1.002888 ACCTCTGTCCACTGATGCTTG 59.997 52.381 0.00 0.00 0.00 4.01
4046 4533 1.356124 ACCTCTGTCCACTGATGCTT 58.644 50.000 0.00 0.00 0.00 3.91
4047 4534 1.356124 AACCTCTGTCCACTGATGCT 58.644 50.000 0.00 0.00 0.00 3.79
4048 4535 2.234908 ACTAACCTCTGTCCACTGATGC 59.765 50.000 0.00 0.00 0.00 3.91
4049 4536 4.707448 ACTACTAACCTCTGTCCACTGATG 59.293 45.833 0.00 0.00 0.00 3.07
4050 4537 4.936802 ACTACTAACCTCTGTCCACTGAT 58.063 43.478 0.00 0.00 0.00 2.90
4051 4538 4.383931 ACTACTAACCTCTGTCCACTGA 57.616 45.455 0.00 0.00 0.00 3.41
4052 4539 4.096682 GCTACTACTAACCTCTGTCCACTG 59.903 50.000 0.00 0.00 0.00 3.66
4053 4540 4.271661 GCTACTACTAACCTCTGTCCACT 58.728 47.826 0.00 0.00 0.00 4.00
4054 4541 3.065095 CGCTACTACTAACCTCTGTCCAC 59.935 52.174 0.00 0.00 0.00 4.02
4055 4542 3.054875 TCGCTACTACTAACCTCTGTCCA 60.055 47.826 0.00 0.00 0.00 4.02
4056 4543 3.539604 TCGCTACTACTAACCTCTGTCC 58.460 50.000 0.00 0.00 0.00 4.02
4057 4544 4.815308 TCATCGCTACTACTAACCTCTGTC 59.185 45.833 0.00 0.00 0.00 3.51
4058 4545 4.778579 TCATCGCTACTACTAACCTCTGT 58.221 43.478 0.00 0.00 0.00 3.41
4059 4546 5.470437 TGATCATCGCTACTACTAACCTCTG 59.530 44.000 0.00 0.00 0.00 3.35
4060 4547 5.622180 TGATCATCGCTACTACTAACCTCT 58.378 41.667 0.00 0.00 0.00 3.69
4061 4548 5.943706 TGATCATCGCTACTACTAACCTC 57.056 43.478 0.00 0.00 0.00 3.85
4062 4549 6.902771 ATTGATCATCGCTACTACTAACCT 57.097 37.500 0.00 0.00 0.00 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.