Multiple sequence alignment - TraesCS5D01G535400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G535400 chr5D 100.000 3659 0 0 1 3659 549322862 549326520 0.000000e+00 6758.0
1 TraesCS5D01G535400 chr5D 88.459 1499 169 4 1150 2646 393739115 393737619 0.000000e+00 1807.0
2 TraesCS5D01G535400 chr4A 94.471 2098 72 14 804 2875 620950621 620952700 0.000000e+00 3192.0
3 TraesCS5D01G535400 chr4A 88.246 553 24 10 3119 3656 621004929 621005455 1.120000e-174 623.0
4 TraesCS5D01G535400 chr4A 97.487 199 5 0 263 461 640235866 640236064 1.260000e-89 340.0
5 TraesCS5D01G535400 chr4A 85.714 266 21 5 541 802 620950324 620950576 7.790000e-67 265.0
6 TraesCS5D01G535400 chr4A 86.893 206 22 4 52 255 620949689 620949891 3.680000e-55 226.0
7 TraesCS5D01G535400 chr4A 90.000 50 5 0 3050 3099 620952689 620952738 8.480000e-07 65.8
8 TraesCS5D01G535400 chr5B 93.484 1504 82 6 1148 2645 701003445 701001952 0.000000e+00 2220.0
9 TraesCS5D01G535400 chr5B 92.876 1516 81 12 1148 2645 700945329 700946835 0.000000e+00 2176.0
10 TraesCS5D01G535400 chr5B 87.342 1501 186 4 1148 2646 473610326 473608828 0.000000e+00 1716.0
11 TraesCS5D01G535400 chr5B 89.560 182 18 1 631 811 700944625 700944806 2.840000e-56 230.0
12 TraesCS5D01G535400 chr5B 87.647 170 14 6 3050 3218 700953420 700953583 1.340000e-44 191.0
13 TraesCS5D01G535400 chr5B 89.286 140 7 6 1023 1156 700945167 700945304 6.280000e-38 169.0
14 TraesCS5D01G535400 chr5B 88.764 89 7 3 3105 3191 700947143 700947230 5.000000e-19 106.0
15 TraesCS5D01G535400 chr5B 96.970 33 1 0 1063 1095 701003552 701003520 5.100000e-04 56.5
16 TraesCS5D01G535400 chr5A 86.742 1501 195 4 1148 2646 663336679 663338177 0.000000e+00 1666.0
17 TraesCS5D01G535400 chr5A 86.676 1501 196 4 1148 2646 495728785 495727287 0.000000e+00 1661.0
18 TraesCS5D01G535400 chr5A 86.216 1509 197 5 1148 2646 495397411 495395904 0.000000e+00 1624.0
19 TraesCS5D01G535400 chr5A 85.743 1501 210 4 1148 2646 495819819 495818321 0.000000e+00 1583.0
20 TraesCS5D01G535400 chr7D 85.420 631 84 8 2023 2649 162789710 162789084 0.000000e+00 649.0
21 TraesCS5D01G535400 chr7D 97.044 203 6 0 263 465 326052565 326052767 3.500000e-90 342.0
22 TraesCS5D01G535400 chr7D 96.569 204 7 0 263 466 127735301 127735098 4.530000e-89 339.0
23 TraesCS5D01G535400 chr7D 89.535 172 12 3 2882 3048 3639645 3639815 2.860000e-51 213.0
24 TraesCS5D01G535400 chr7A 84.469 631 90 8 2023 2649 163393631 163393005 1.870000e-172 616.0
25 TraesCS5D01G535400 chr7A 96.585 205 7 0 257 461 401405175 401405379 1.260000e-89 340.0
26 TraesCS5D01G535400 chr3D 98.492 199 3 0 263 461 108290863 108291061 5.810000e-93 351.0
27 TraesCS5D01G535400 chr1D 98.000 200 3 1 263 462 46330838 46331036 2.700000e-91 346.0
28 TraesCS5D01G535400 chr1D 82.065 184 25 4 2871 3047 480382359 480382177 2.280000e-32 150.0
29 TraesCS5D01G535400 chr7B 96.135 207 7 1 263 469 732428163 732427958 1.630000e-88 337.0
30 TraesCS5D01G535400 chr6D 95.735 211 5 3 263 471 3331688 3331896 1.630000e-88 337.0
31 TraesCS5D01G535400 chr6D 95.735 211 5 3 263 471 3337568 3337776 1.630000e-88 337.0
32 TraesCS5D01G535400 chr6B 85.000 180 25 2 2871 3049 688664232 688664054 8.070000e-42 182.0
33 TraesCS5D01G535400 chr6B 81.383 188 24 10 2869 3049 87631778 87631961 3.810000e-30 143.0
34 TraesCS5D01G535400 chr1B 82.022 178 28 2 2871 3048 551230943 551230770 8.190000e-32 148.0
35 TraesCS5D01G535400 chr3A 81.203 133 19 3 2872 3004 574228479 574228353 6.460000e-18 102.0
36 TraesCS5D01G535400 chr1A 100.000 41 0 0 3008 3048 573244679 573244719 3.920000e-10 76.8
37 TraesCS5D01G535400 chrUn 100.000 28 0 0 3021 3048 124711977 124712004 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G535400 chr5D 549322862 549326520 3658 False 6758.00 6758 100.0000 1 3659 1 chr5D.!!$F1 3658
1 TraesCS5D01G535400 chr5D 393737619 393739115 1496 True 1807.00 1807 88.4590 1150 2646 1 chr5D.!!$R1 1496
2 TraesCS5D01G535400 chr4A 620949689 620952738 3049 False 937.20 3192 89.2695 52 3099 4 chr4A.!!$F3 3047
3 TraesCS5D01G535400 chr4A 621004929 621005455 526 False 623.00 623 88.2460 3119 3656 1 chr4A.!!$F1 537
4 TraesCS5D01G535400 chr5B 473608828 473610326 1498 True 1716.00 1716 87.3420 1148 2646 1 chr5B.!!$R1 1498
5 TraesCS5D01G535400 chr5B 701001952 701003552 1600 True 1138.25 2220 95.2270 1063 2645 2 chr5B.!!$R2 1582
6 TraesCS5D01G535400 chr5B 700944625 700947230 2605 False 670.25 2176 90.1215 631 3191 4 chr5B.!!$F2 2560
7 TraesCS5D01G535400 chr5A 663336679 663338177 1498 False 1666.00 1666 86.7420 1148 2646 1 chr5A.!!$F1 1498
8 TraesCS5D01G535400 chr5A 495727287 495728785 1498 True 1661.00 1661 86.6760 1148 2646 1 chr5A.!!$R2 1498
9 TraesCS5D01G535400 chr5A 495395904 495397411 1507 True 1624.00 1624 86.2160 1148 2646 1 chr5A.!!$R1 1498
10 TraesCS5D01G535400 chr5A 495818321 495819819 1498 True 1583.00 1583 85.7430 1148 2646 1 chr5A.!!$R3 1498
11 TraesCS5D01G535400 chr7D 162789084 162789710 626 True 649.00 649 85.4200 2023 2649 1 chr7D.!!$R2 626
12 TraesCS5D01G535400 chr7A 163393005 163393631 626 True 616.00 616 84.4690 2023 2649 1 chr7A.!!$R1 626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
611 781 0.163146 TCGTCGTCGATGCGCTATAG 59.837 55.0 9.73 1.14 41.35 1.31 F
663 837 0.248054 GACAATATGTTGGTGCCGCG 60.248 55.0 7.15 0.00 39.70 6.46 F
1010 1400 0.818445 CCATGCCACATGCTCTCTCC 60.818 60.0 1.97 0.00 42.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1791 2250 0.676782 CGGCGTTGGGGAAGAAATCT 60.677 55.0 0.00 0.0 0.00 2.40 R
2568 3051 0.690411 CCTCCTCCATGCTCACCTCT 60.690 60.0 0.00 0.0 0.00 3.69 R
2950 3487 0.704076 TCTGATTTTCAGGGGGTGGG 59.296 55.0 4.78 0.0 44.39 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 6.590234 GGAGAGCCCTTCTTTTATCAAAAA 57.410 37.500 0.00 0.00 35.87 1.94
49 50 5.947228 AAATGTGTCCAGTAAGTCACATG 57.053 39.130 9.77 0.00 46.33 3.21
50 51 2.766313 TGTGTCCAGTAAGTCACATGC 58.234 47.619 0.00 0.00 36.17 4.06
77 78 6.455647 AGGCAGCCAATAAAAGTAAGTTTTC 58.544 36.000 15.80 0.00 39.23 2.29
80 83 7.095649 GGCAGCCAATAAAAGTAAGTTTTCAAG 60.096 37.037 6.55 0.00 39.23 3.02
106 109 9.708222 GGCAATATGTATATTAAGAGAAATGCG 57.292 33.333 0.00 0.00 32.05 4.73
128 131 9.651913 ATGCGATTTATGTGAGGTTTTAAAAAT 57.348 25.926 1.31 0.00 0.00 1.82
195 198 1.135024 CAACATATGCACAAGGGGCAC 60.135 52.381 1.58 0.00 45.23 5.01
243 246 2.228059 AGATGGAGTGCATGCATAAGC 58.772 47.619 25.64 11.03 40.55 3.09
255 258 4.478699 CATGCATAAGCCATTGAATACCG 58.521 43.478 0.00 0.00 41.13 4.02
257 260 2.293122 GCATAAGCCATTGAATACCGCA 59.707 45.455 0.00 0.00 33.58 5.69
258 261 3.057315 GCATAAGCCATTGAATACCGCAT 60.057 43.478 0.00 0.00 33.58 4.73
262 265 4.085357 AGCCATTGAATACCGCATCTAA 57.915 40.909 0.00 0.00 0.00 2.10
263 266 3.815401 AGCCATTGAATACCGCATCTAAC 59.185 43.478 0.00 0.00 0.00 2.34
264 267 3.563808 GCCATTGAATACCGCATCTAACA 59.436 43.478 0.00 0.00 0.00 2.41
266 269 5.751680 CCATTGAATACCGCATCTAACAAG 58.248 41.667 0.00 0.00 0.00 3.16
269 272 4.439057 TGAATACCGCATCTAACAAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
272 275 3.521947 ACCGCATCTAACAAGTCCTAC 57.478 47.619 0.00 0.00 0.00 3.18
273 276 2.159282 ACCGCATCTAACAAGTCCTACG 60.159 50.000 0.00 0.00 0.00 3.51
274 277 1.852895 CGCATCTAACAAGTCCTACGC 59.147 52.381 0.00 0.00 0.00 4.42
276 279 2.734492 GCATCTAACAAGTCCTACGCGT 60.734 50.000 19.17 19.17 0.00 6.01
277 280 3.488047 GCATCTAACAAGTCCTACGCGTA 60.488 47.826 19.40 19.40 0.00 4.42
278 281 4.792057 GCATCTAACAAGTCCTACGCGTAT 60.792 45.833 20.91 1.06 0.00 3.06
279 282 5.561532 GCATCTAACAAGTCCTACGCGTATA 60.562 44.000 20.91 8.44 0.00 1.47
280 283 5.409643 TCTAACAAGTCCTACGCGTATAC 57.590 43.478 20.91 19.74 0.00 1.47
281 284 3.427161 AACAAGTCCTACGCGTATACC 57.573 47.619 20.91 10.04 0.00 2.73
282 285 2.648059 ACAAGTCCTACGCGTATACCT 58.352 47.619 20.91 12.19 0.00 3.08
283 286 3.808728 ACAAGTCCTACGCGTATACCTA 58.191 45.455 20.91 0.00 0.00 3.08
284 287 3.812053 ACAAGTCCTACGCGTATACCTAG 59.188 47.826 20.91 8.56 0.00 3.02
285 288 3.051081 AGTCCTACGCGTATACCTAGG 57.949 52.381 20.91 18.03 0.00 3.02
286 289 2.370189 AGTCCTACGCGTATACCTAGGT 59.630 50.000 20.91 20.57 0.00 3.08
287 290 3.142174 GTCCTACGCGTATACCTAGGTT 58.858 50.000 22.11 10.62 0.00 3.50
288 291 3.058639 GTCCTACGCGTATACCTAGGTTG 60.059 52.174 22.11 9.15 0.00 3.77
289 292 2.351157 CCTACGCGTATACCTAGGTTGC 60.351 54.545 22.11 17.41 0.00 4.17
290 293 0.386838 ACGCGTATACCTAGGTTGCC 59.613 55.000 22.11 7.02 0.00 4.52
291 294 0.386476 CGCGTATACCTAGGTTGCCA 59.614 55.000 22.11 1.21 0.00 4.92
292 295 1.202440 CGCGTATACCTAGGTTGCCAA 60.202 52.381 22.11 0.75 0.00 4.52
293 296 2.547218 CGCGTATACCTAGGTTGCCAAT 60.547 50.000 22.11 9.64 0.00 3.16
294 297 3.473625 GCGTATACCTAGGTTGCCAATT 58.526 45.455 22.11 0.00 0.00 2.32
299 302 7.572539 GCGTATACCTAGGTTGCCAATTTTATC 60.573 40.741 22.11 0.00 0.00 1.75
300 303 7.442969 CGTATACCTAGGTTGCCAATTTTATCA 59.557 37.037 22.11 0.00 0.00 2.15
301 304 5.914898 ACCTAGGTTGCCAATTTTATCAC 57.085 39.130 9.21 0.00 0.00 3.06
302 305 4.709886 ACCTAGGTTGCCAATTTTATCACC 59.290 41.667 9.21 0.00 0.00 4.02
303 306 4.709397 CCTAGGTTGCCAATTTTATCACCA 59.291 41.667 0.00 0.00 0.00 4.17
305 308 6.549364 CCTAGGTTGCCAATTTTATCACCATA 59.451 38.462 0.00 0.00 0.00 2.74
306 309 6.865834 AGGTTGCCAATTTTATCACCATAA 57.134 33.333 0.00 0.00 0.00 1.90
307 310 7.436320 AGGTTGCCAATTTTATCACCATAAT 57.564 32.000 0.00 0.00 0.00 1.28
309 312 9.158097 AGGTTGCCAATTTTATCACCATAATAT 57.842 29.630 0.00 0.00 0.00 1.28
358 361 7.584987 ACCGTTTGAAAATAGAACATCTGAAG 58.415 34.615 0.00 0.00 0.00 3.02
359 362 7.228706 ACCGTTTGAAAATAGAACATCTGAAGT 59.771 33.333 0.00 0.00 0.00 3.01
360 363 8.076178 CCGTTTGAAAATAGAACATCTGAAGTT 58.924 33.333 0.00 0.00 0.00 2.66
361 364 9.450807 CGTTTGAAAATAGAACATCTGAAGTTT 57.549 29.630 0.00 0.00 0.00 2.66
411 414 8.650143 ATGACTTGTATTAGGTTGGTCAAATT 57.350 30.769 0.00 0.00 36.16 1.82
412 415 7.881142 TGACTTGTATTAGGTTGGTCAAATTG 58.119 34.615 0.00 0.00 30.81 2.32
413 416 7.721842 TGACTTGTATTAGGTTGGTCAAATTGA 59.278 33.333 0.00 0.00 30.81 2.57
414 417 7.882179 ACTTGTATTAGGTTGGTCAAATTGAC 58.118 34.615 17.16 17.16 46.23 3.18
424 427 2.629051 GTCAAATTGACGACCTAGGGG 58.371 52.381 14.81 7.16 37.67 4.79
427 430 4.916984 GTCAAATTGACGACCTAGGGGTAC 60.917 50.000 14.81 2.61 40.90 3.34
441 444 4.781959 GTACGCGCACGCCCTGTA 62.782 66.667 5.73 3.39 45.53 2.74
443 446 3.570621 TACGCGCACGCCCTGTAAA 62.571 57.895 5.73 0.00 45.53 2.01
444 447 4.439472 CGCGCACGCCCTGTAAAC 62.439 66.667 8.75 0.00 37.98 2.01
446 449 2.860293 CGCACGCCCTGTAAACTG 59.140 61.111 0.00 0.00 0.00 3.16
448 451 1.626654 CGCACGCCCTGTAAACTGAG 61.627 60.000 0.00 0.00 0.00 3.35
449 452 0.320421 GCACGCCCTGTAAACTGAGA 60.320 55.000 0.00 0.00 0.00 3.27
450 453 1.714794 CACGCCCTGTAAACTGAGAG 58.285 55.000 0.00 0.00 0.00 3.20
451 454 1.272490 CACGCCCTGTAAACTGAGAGA 59.728 52.381 0.00 0.00 0.00 3.10
452 455 1.546476 ACGCCCTGTAAACTGAGAGAG 59.454 52.381 0.00 0.00 0.00 3.20
453 456 1.819288 CGCCCTGTAAACTGAGAGAGA 59.181 52.381 0.00 0.00 0.00 3.10
454 457 2.159310 CGCCCTGTAAACTGAGAGAGAG 60.159 54.545 0.00 0.00 0.00 3.20
455 458 2.167487 GCCCTGTAAACTGAGAGAGAGG 59.833 54.545 0.00 0.00 0.00 3.69
456 459 3.436243 CCCTGTAAACTGAGAGAGAGGT 58.564 50.000 0.00 0.00 0.00 3.85
457 460 4.601084 CCCTGTAAACTGAGAGAGAGGTA 58.399 47.826 0.00 0.00 0.00 3.08
458 461 4.642885 CCCTGTAAACTGAGAGAGAGGTAG 59.357 50.000 0.00 0.00 0.00 3.18
461 464 6.540914 CCTGTAAACTGAGAGAGAGGTAGTAG 59.459 46.154 0.00 0.00 0.00 2.57
462 465 7.018487 TGTAAACTGAGAGAGAGGTAGTAGT 57.982 40.000 0.00 0.00 0.00 2.73
464 467 8.259411 TGTAAACTGAGAGAGAGGTAGTAGTAG 58.741 40.741 0.00 0.00 0.00 2.57
465 468 6.879367 AACTGAGAGAGAGGTAGTAGTAGT 57.121 41.667 0.00 0.00 0.00 2.73
466 469 6.879367 ACTGAGAGAGAGGTAGTAGTAGTT 57.121 41.667 0.00 0.00 0.00 2.24
472 642 9.086758 GAGAGAGAGGTAGTAGTAGTTATCTCT 57.913 40.741 12.11 12.11 43.63 3.10
473 643 9.443365 AGAGAGAGGTAGTAGTAGTTATCTCTT 57.557 37.037 13.40 3.81 41.64 2.85
474 644 9.485206 GAGAGAGGTAGTAGTAGTTATCTCTTG 57.515 40.741 13.40 0.00 41.64 3.02
477 647 7.935210 AGAGGTAGTAGTAGTTATCTCTTGCTC 59.065 40.741 0.51 0.00 0.00 4.26
486 656 4.777896 AGTTATCTCTTGCTCTAACCACCA 59.222 41.667 0.00 0.00 0.00 4.17
491 661 6.121776 TCTCTTGCTCTAACCACCAAAATA 57.878 37.500 0.00 0.00 0.00 1.40
497 667 5.417580 TGCTCTAACCACCAAAATAATCCAC 59.582 40.000 0.00 0.00 0.00 4.02
506 676 3.283751 CAAAATAATCCACGGGCCACTA 58.716 45.455 4.39 0.00 0.00 2.74
507 677 2.632987 AATAATCCACGGGCCACTAC 57.367 50.000 4.39 0.00 0.00 2.73
508 678 1.802553 ATAATCCACGGGCCACTACT 58.197 50.000 4.39 0.00 0.00 2.57
509 679 1.117150 TAATCCACGGGCCACTACTC 58.883 55.000 4.39 0.00 0.00 2.59
510 680 0.907704 AATCCACGGGCCACTACTCA 60.908 55.000 4.39 0.00 0.00 3.41
511 681 1.614241 ATCCACGGGCCACTACTCAC 61.614 60.000 4.39 0.00 0.00 3.51
512 682 2.283529 CCACGGGCCACTACTCACT 61.284 63.158 4.39 0.00 0.00 3.41
513 683 1.079819 CACGGGCCACTACTCACTG 60.080 63.158 4.39 0.00 0.00 3.66
515 685 1.215647 CGGGCCACTACTCACTGAC 59.784 63.158 4.39 0.00 0.00 3.51
516 686 1.597461 GGGCCACTACTCACTGACC 59.403 63.158 4.39 0.00 0.00 4.02
517 687 1.192146 GGGCCACTACTCACTGACCA 61.192 60.000 4.39 0.00 0.00 4.02
518 688 0.685097 GGCCACTACTCACTGACCAA 59.315 55.000 0.00 0.00 0.00 3.67
519 689 1.071699 GGCCACTACTCACTGACCAAA 59.928 52.381 0.00 0.00 0.00 3.28
520 690 2.486548 GGCCACTACTCACTGACCAAAA 60.487 50.000 0.00 0.00 0.00 2.44
521 691 2.548480 GCCACTACTCACTGACCAAAAC 59.452 50.000 0.00 0.00 0.00 2.43
522 692 3.139077 CCACTACTCACTGACCAAAACC 58.861 50.000 0.00 0.00 0.00 3.27
523 693 3.433031 CCACTACTCACTGACCAAAACCA 60.433 47.826 0.00 0.00 0.00 3.67
524 694 4.196193 CACTACTCACTGACCAAAACCAA 58.804 43.478 0.00 0.00 0.00 3.67
525 695 4.035208 CACTACTCACTGACCAAAACCAAC 59.965 45.833 0.00 0.00 0.00 3.77
526 696 2.375146 ACTCACTGACCAAAACCAACC 58.625 47.619 0.00 0.00 0.00 3.77
527 697 1.333619 CTCACTGACCAAAACCAACCG 59.666 52.381 0.00 0.00 0.00 4.44
528 698 1.065345 TCACTGACCAAAACCAACCGA 60.065 47.619 0.00 0.00 0.00 4.69
529 699 1.953686 CACTGACCAAAACCAACCGAT 59.046 47.619 0.00 0.00 0.00 4.18
530 700 1.953686 ACTGACCAAAACCAACCGATG 59.046 47.619 0.00 0.00 0.00 3.84
559 729 7.039011 ACTCACAAACATAGAAGATGGAGTACA 60.039 37.037 0.00 0.00 30.78 2.90
575 745 5.104941 TGGAGTACATAAGTCATTGACCTGG 60.105 44.000 13.14 3.88 32.18 4.45
578 748 7.200434 AGTACATAAGTCATTGACCTGGATT 57.800 36.000 13.14 3.63 32.18 3.01
581 751 9.561069 GTACATAAGTCATTGACCTGGATTTAT 57.439 33.333 13.14 6.97 32.18 1.40
587 757 8.738645 AGTCATTGACCTGGATTTATTAGAAC 57.261 34.615 13.14 0.00 32.18 3.01
588 758 7.495934 AGTCATTGACCTGGATTTATTAGAACG 59.504 37.037 13.14 0.00 32.18 3.95
589 759 7.494625 GTCATTGACCTGGATTTATTAGAACGA 59.505 37.037 5.44 0.00 0.00 3.85
590 760 7.494625 TCATTGACCTGGATTTATTAGAACGAC 59.505 37.037 0.00 0.00 0.00 4.34
591 761 5.345702 TGACCTGGATTTATTAGAACGACG 58.654 41.667 0.00 0.00 0.00 5.12
592 762 5.105635 TGACCTGGATTTATTAGAACGACGT 60.106 40.000 0.00 0.00 0.00 4.34
610 780 2.228115 TCGTCGTCGATGCGCTATA 58.772 52.632 9.73 0.00 41.35 1.31
611 781 0.163146 TCGTCGTCGATGCGCTATAG 59.837 55.000 9.73 1.14 41.35 1.31
621 795 6.075832 CGTCGATGCGCTATAGAAGATATTTC 60.076 42.308 9.73 0.00 0.00 2.17
624 798 6.531594 CGATGCGCTATAGAAGATATTTCCAA 59.468 38.462 9.73 0.00 0.00 3.53
625 799 7.063426 CGATGCGCTATAGAAGATATTTCCAAA 59.937 37.037 9.73 0.00 0.00 3.28
626 800 8.621532 ATGCGCTATAGAAGATATTTCCAAAA 57.378 30.769 9.73 0.00 0.00 2.44
627 801 7.861630 TGCGCTATAGAAGATATTTCCAAAAC 58.138 34.615 9.73 0.00 0.00 2.43
628 802 7.497579 TGCGCTATAGAAGATATTTCCAAAACA 59.502 33.333 9.73 0.00 0.00 2.83
629 803 7.798982 GCGCTATAGAAGATATTTCCAAAACAC 59.201 37.037 3.21 0.00 0.00 3.32
663 837 0.248054 GACAATATGTTGGTGCCGCG 60.248 55.000 7.15 0.00 39.70 6.46
674 848 1.880675 TGGTGCCGCGAAATTAAGAAA 59.119 42.857 8.23 0.00 0.00 2.52
678 852 1.810197 CCGCGAAATTAAGAAAGGCG 58.190 50.000 8.23 0.00 41.60 5.52
679 853 1.810197 CGCGAAATTAAGAAAGGCGG 58.190 50.000 0.00 0.00 38.62 6.13
697 871 6.475596 AGGCGGTGTTAATATAGTTGTAGT 57.524 37.500 0.00 0.00 0.00 2.73
701 875 6.201615 GCGGTGTTAATATAGTTGTAGTTCCC 59.798 42.308 0.00 0.00 0.00 3.97
744 918 4.240096 ACGTTTGTAGGTAGGTTCGATTG 58.760 43.478 0.00 0.00 0.00 2.67
764 938 2.300152 TGGTTGGCGCCAAATTTGAATA 59.700 40.909 41.60 16.10 37.70 1.75
791 965 1.208052 TCTTGCCTGCCAGCTAAGTAG 59.792 52.381 6.21 0.00 0.00 2.57
798 972 3.181474 CCTGCCAGCTAAGTAGTTCCTAC 60.181 52.174 0.00 0.00 37.23 3.18
802 976 4.322499 GCCAGCTAAGTAGTTCCTACAACA 60.322 45.833 4.39 0.00 39.22 3.33
807 1191 7.063544 CAGCTAAGTAGTTCCTACAACAATCAC 59.936 40.741 4.39 0.00 39.22 3.06
819 1203 3.005050 ACAACAATCACCAACTGCATGAG 59.995 43.478 0.00 0.00 0.00 2.90
823 1207 4.232221 CAATCACCAACTGCATGAGTTTC 58.768 43.478 0.00 0.00 42.70 2.78
844 1228 3.568007 TCCAACCAATCGACAAAAGAAGG 59.432 43.478 0.00 0.00 0.00 3.46
856 1240 6.202954 TCGACAAAAGAAGGAGAAGAATCAAC 59.797 38.462 0.00 0.00 0.00 3.18
906 1290 2.309613 TGTAGGAAATGCATGGATGGC 58.690 47.619 0.00 0.00 0.00 4.40
981 1371 3.681855 CTCATCAGCAAGCAATCGAAAG 58.318 45.455 0.00 0.00 0.00 2.62
1010 1400 0.818445 CCATGCCACATGCTCTCTCC 60.818 60.000 1.97 0.00 42.00 3.71
1055 1470 3.069443 GCCATTCAAGTTTCAACCTCCAA 59.931 43.478 0.00 0.00 0.00 3.53
1177 1633 4.803908 CCGGCTTCCTCCTTGCCC 62.804 72.222 0.00 0.00 43.42 5.36
1204 1663 2.203640 ACCTGCTGGTGACGAGGA 60.204 61.111 15.36 0.00 46.51 3.71
1773 2232 0.977627 TCGAGGGCATGGACATGTCT 60.978 55.000 24.50 11.95 42.72 3.41
1791 2250 4.760047 GCCAGCTTCTCGGCCGAA 62.760 66.667 30.53 14.93 42.82 4.30
2004 2466 1.899437 ATGGCTTCACGACGGACCAT 61.899 55.000 0.00 1.78 33.11 3.55
2097 2559 1.684386 CGGAGCTCATGAGGAAGCCT 61.684 60.000 23.89 11.83 36.03 4.58
2134 2596 1.383664 CAGGAGGAGATCAGGGCCA 60.384 63.158 6.18 0.00 0.00 5.36
2342 2825 4.916314 GGCGATCGGGAGGGAGGA 62.916 72.222 18.30 0.00 0.00 3.71
2568 3051 2.375345 GGAGGGGATGAAGGCGGAA 61.375 63.158 0.00 0.00 0.00 4.30
2619 3102 4.243008 TTCCACCGCAAGACGCCA 62.243 61.111 0.00 0.00 41.76 5.69
2687 3170 2.306799 GCATCTTGCGCTGCTAATAC 57.693 50.000 9.73 0.00 35.49 1.89
2689 3172 2.349249 GCATCTTGCGCTGCTAATACAG 60.349 50.000 9.73 0.00 35.57 2.74
2767 3298 9.350951 GAGTTTATACTACCTTGGGCAAATATT 57.649 33.333 0.00 0.00 33.84 1.28
2851 3388 8.721478 TCTTATTTAAAGCAAACTAGCAGAGTG 58.279 33.333 0.00 0.00 38.87 3.51
2861 3398 2.343758 GCAGAGTGTTGCGAGGGA 59.656 61.111 0.00 0.00 33.90 4.20
2872 3409 4.427394 CGAGGGAATCGCCTTCAG 57.573 61.111 0.00 0.00 45.98 3.02
2873 3410 1.517832 CGAGGGAATCGCCTTCAGT 59.482 57.895 0.00 0.00 45.98 3.41
2874 3411 0.744874 CGAGGGAATCGCCTTCAGTA 59.255 55.000 0.00 0.00 45.98 2.74
2877 3414 3.134458 GAGGGAATCGCCTTCAGTAATG 58.866 50.000 0.00 0.00 42.16 1.90
2878 3415 1.604278 GGGAATCGCCTTCAGTAATGC 59.396 52.381 0.00 0.00 35.41 3.56
2880 3417 3.494398 GGGAATCGCCTTCAGTAATGCTA 60.494 47.826 0.00 0.00 35.41 3.49
2881 3418 3.495001 GGAATCGCCTTCAGTAATGCTAC 59.505 47.826 0.00 0.00 35.41 3.58
2882 3419 3.819564 ATCGCCTTCAGTAATGCTACA 57.180 42.857 0.00 0.00 0.00 2.74
2885 3422 2.618053 GCCTTCAGTAATGCTACACGT 58.382 47.619 0.00 0.00 0.00 4.49
2886 3423 3.732774 CGCCTTCAGTAATGCTACACGTA 60.733 47.826 0.00 0.00 0.00 3.57
2887 3424 3.550678 GCCTTCAGTAATGCTACACGTAC 59.449 47.826 0.00 0.00 0.00 3.67
2888 3425 4.740268 CCTTCAGTAATGCTACACGTACA 58.260 43.478 0.00 0.00 0.00 2.90
2889 3426 5.165676 CCTTCAGTAATGCTACACGTACAA 58.834 41.667 0.00 0.00 0.00 2.41
2891 3428 6.400727 CCTTCAGTAATGCTACACGTACAAAC 60.401 42.308 0.00 0.00 0.00 2.93
2915 3452 6.483687 CGATTTACGGGATTTTACAAAGAGG 58.516 40.000 0.00 0.00 38.46 3.69
2916 3453 6.093082 CGATTTACGGGATTTTACAAAGAGGT 59.907 38.462 0.00 0.00 38.46 3.85
2917 3454 7.361457 CGATTTACGGGATTTTACAAAGAGGTT 60.361 37.037 0.00 0.00 38.46 3.50
2918 3455 7.585579 TTTACGGGATTTTACAAAGAGGTTT 57.414 32.000 0.00 0.00 0.00 3.27
2919 3456 8.688747 TTTACGGGATTTTACAAAGAGGTTTA 57.311 30.769 0.00 0.00 0.00 2.01
2920 3457 6.812879 ACGGGATTTTACAAAGAGGTTTAG 57.187 37.500 0.00 0.00 0.00 1.85
2921 3458 5.182570 ACGGGATTTTACAAAGAGGTTTAGC 59.817 40.000 0.00 0.00 0.00 3.09
2922 3459 5.414765 CGGGATTTTACAAAGAGGTTTAGCT 59.585 40.000 0.00 0.00 0.00 3.32
2923 3460 6.072119 CGGGATTTTACAAAGAGGTTTAGCTT 60.072 38.462 0.00 0.00 0.00 3.74
2924 3461 7.090808 GGGATTTTACAAAGAGGTTTAGCTTG 58.909 38.462 0.00 0.00 0.00 4.01
2925 3462 7.039993 GGGATTTTACAAAGAGGTTTAGCTTGA 60.040 37.037 0.00 0.00 0.00 3.02
2926 3463 8.523658 GGATTTTACAAAGAGGTTTAGCTTGAT 58.476 33.333 0.00 0.00 0.00 2.57
2927 3464 9.914131 GATTTTACAAAGAGGTTTAGCTTGATT 57.086 29.630 0.00 0.00 0.00 2.57
2928 3465 9.696917 ATTTTACAAAGAGGTTTAGCTTGATTG 57.303 29.630 0.00 0.00 0.00 2.67
2929 3466 5.712152 ACAAAGAGGTTTAGCTTGATTGG 57.288 39.130 0.00 0.00 0.00 3.16
2930 3467 5.140454 ACAAAGAGGTTTAGCTTGATTGGT 58.860 37.500 0.00 0.00 0.00 3.67
2931 3468 5.241728 ACAAAGAGGTTTAGCTTGATTGGTC 59.758 40.000 0.00 0.00 0.00 4.02
2932 3469 4.640771 AGAGGTTTAGCTTGATTGGTCA 57.359 40.909 0.00 0.00 0.00 4.02
2933 3470 4.985538 AGAGGTTTAGCTTGATTGGTCAA 58.014 39.130 0.00 0.00 41.89 3.18
2934 3471 5.574188 AGAGGTTTAGCTTGATTGGTCAAT 58.426 37.500 0.00 0.00 43.08 2.57
2935 3472 6.721318 AGAGGTTTAGCTTGATTGGTCAATA 58.279 36.000 0.00 0.00 43.08 1.90
2936 3473 6.825721 AGAGGTTTAGCTTGATTGGTCAATAG 59.174 38.462 0.00 0.00 43.08 1.73
2937 3474 5.888161 AGGTTTAGCTTGATTGGTCAATAGG 59.112 40.000 0.00 0.00 43.08 2.57
2938 3475 5.652452 GGTTTAGCTTGATTGGTCAATAGGT 59.348 40.000 0.00 0.76 43.08 3.08
2939 3476 6.826741 GGTTTAGCTTGATTGGTCAATAGGTA 59.173 38.462 0.00 0.00 43.08 3.08
2940 3477 7.338449 GGTTTAGCTTGATTGGTCAATAGGTAA 59.662 37.037 11.17 11.17 43.08 2.85
2941 3478 8.398665 GTTTAGCTTGATTGGTCAATAGGTAAG 58.601 37.037 13.27 9.55 43.08 2.34
2942 3479 6.313519 AGCTTGATTGGTCAATAGGTAAGA 57.686 37.500 0.00 0.00 43.08 2.10
2943 3480 6.352516 AGCTTGATTGGTCAATAGGTAAGAG 58.647 40.000 0.00 0.00 43.08 2.85
2944 3481 6.156949 AGCTTGATTGGTCAATAGGTAAGAGA 59.843 38.462 0.00 0.00 43.08 3.10
2945 3482 6.481644 GCTTGATTGGTCAATAGGTAAGAGAG 59.518 42.308 0.00 0.00 43.08 3.20
2946 3483 6.485830 TGATTGGTCAATAGGTAAGAGAGG 57.514 41.667 0.00 0.00 0.00 3.69
2947 3484 5.964477 TGATTGGTCAATAGGTAAGAGAGGT 59.036 40.000 0.00 0.00 0.00 3.85
2948 3485 5.677319 TTGGTCAATAGGTAAGAGAGGTG 57.323 43.478 0.00 0.00 0.00 4.00
2949 3486 4.030913 TGGTCAATAGGTAAGAGAGGTGG 58.969 47.826 0.00 0.00 0.00 4.61
2950 3487 3.181464 GGTCAATAGGTAAGAGAGGTGGC 60.181 52.174 0.00 0.00 0.00 5.01
2951 3488 3.039011 TCAATAGGTAAGAGAGGTGGCC 58.961 50.000 0.00 0.00 0.00 5.36
2952 3489 2.104669 ATAGGTAAGAGAGGTGGCCC 57.895 55.000 0.00 0.00 0.00 5.80
2953 3490 0.714180 TAGGTAAGAGAGGTGGCCCA 59.286 55.000 0.00 0.00 0.00 5.36
2954 3491 0.910088 AGGTAAGAGAGGTGGCCCAC 60.910 60.000 4.93 4.93 0.00 4.61
2963 3500 3.909651 GTGGCCCACCCCCTGAAA 61.910 66.667 1.17 0.00 33.59 2.69
2964 3501 3.113477 TGGCCCACCCCCTGAAAA 61.113 61.111 0.00 0.00 33.59 2.29
2965 3502 2.449777 GGCCCACCCCCTGAAAAT 59.550 61.111 0.00 0.00 0.00 1.82
2966 3503 1.685765 GGCCCACCCCCTGAAAATC 60.686 63.158 0.00 0.00 0.00 2.17
2967 3504 1.078347 GCCCACCCCCTGAAAATCA 59.922 57.895 0.00 0.00 0.00 2.57
2968 3505 0.972471 GCCCACCCCCTGAAAATCAG 60.972 60.000 0.32 0.32 43.91 2.90
2982 3519 6.648879 TGAAAATCAGAGGGGTAAAGTTTG 57.351 37.500 0.00 0.00 0.00 2.93
2983 3520 6.133356 TGAAAATCAGAGGGGTAAAGTTTGT 58.867 36.000 0.00 0.00 0.00 2.83
2984 3521 6.040391 TGAAAATCAGAGGGGTAAAGTTTGTG 59.960 38.462 0.00 0.00 0.00 3.33
2985 3522 4.993705 ATCAGAGGGGTAAAGTTTGTGA 57.006 40.909 0.00 0.00 0.00 3.58
2986 3523 4.993705 TCAGAGGGGTAAAGTTTGTGAT 57.006 40.909 0.00 0.00 0.00 3.06
2987 3524 5.319043 TCAGAGGGGTAAAGTTTGTGATT 57.681 39.130 0.00 0.00 0.00 2.57
2988 3525 5.070001 TCAGAGGGGTAAAGTTTGTGATTG 58.930 41.667 0.00 0.00 0.00 2.67
2989 3526 4.218417 CAGAGGGGTAAAGTTTGTGATTGG 59.782 45.833 0.00 0.00 0.00 3.16
2990 3527 4.141018 AGAGGGGTAAAGTTTGTGATTGGT 60.141 41.667 0.00 0.00 0.00 3.67
2991 3528 4.552674 AGGGGTAAAGTTTGTGATTGGTT 58.447 39.130 0.00 0.00 0.00 3.67
2992 3529 5.707495 AGGGGTAAAGTTTGTGATTGGTTA 58.293 37.500 0.00 0.00 0.00 2.85
2993 3530 5.773176 AGGGGTAAAGTTTGTGATTGGTTAG 59.227 40.000 0.00 0.00 0.00 2.34
2994 3531 5.047590 GGGGTAAAGTTTGTGATTGGTTAGG 60.048 44.000 0.00 0.00 0.00 2.69
2995 3532 5.771165 GGGTAAAGTTTGTGATTGGTTAGGA 59.229 40.000 0.00 0.00 0.00 2.94
2996 3533 6.072119 GGGTAAAGTTTGTGATTGGTTAGGAG 60.072 42.308 0.00 0.00 0.00 3.69
2997 3534 6.713450 GGTAAAGTTTGTGATTGGTTAGGAGA 59.287 38.462 0.00 0.00 0.00 3.71
2998 3535 7.393515 GGTAAAGTTTGTGATTGGTTAGGAGAT 59.606 37.037 0.00 0.00 0.00 2.75
2999 3536 9.444600 GTAAAGTTTGTGATTGGTTAGGAGATA 57.555 33.333 0.00 0.00 0.00 1.98
3000 3537 8.567285 AAAGTTTGTGATTGGTTAGGAGATAG 57.433 34.615 0.00 0.00 0.00 2.08
3001 3538 7.496346 AGTTTGTGATTGGTTAGGAGATAGA 57.504 36.000 0.00 0.00 0.00 1.98
3002 3539 7.918076 AGTTTGTGATTGGTTAGGAGATAGAA 58.082 34.615 0.00 0.00 0.00 2.10
3003 3540 8.383175 AGTTTGTGATTGGTTAGGAGATAGAAA 58.617 33.333 0.00 0.00 0.00 2.52
3004 3541 8.669243 GTTTGTGATTGGTTAGGAGATAGAAAG 58.331 37.037 0.00 0.00 0.00 2.62
3005 3542 7.733773 TGTGATTGGTTAGGAGATAGAAAGA 57.266 36.000 0.00 0.00 0.00 2.52
3006 3543 7.786030 TGTGATTGGTTAGGAGATAGAAAGAG 58.214 38.462 0.00 0.00 0.00 2.85
3007 3544 6.704050 GTGATTGGTTAGGAGATAGAAAGAGC 59.296 42.308 0.00 0.00 0.00 4.09
3008 3545 5.615925 TTGGTTAGGAGATAGAAAGAGCC 57.384 43.478 0.00 0.00 0.00 4.70
3009 3546 4.884961 TGGTTAGGAGATAGAAAGAGCCT 58.115 43.478 0.00 0.00 0.00 4.58
3010 3547 4.651503 TGGTTAGGAGATAGAAAGAGCCTG 59.348 45.833 0.00 0.00 0.00 4.85
3011 3548 4.651962 GGTTAGGAGATAGAAAGAGCCTGT 59.348 45.833 0.00 0.00 0.00 4.00
3012 3549 5.834204 GGTTAGGAGATAGAAAGAGCCTGTA 59.166 44.000 0.00 0.00 0.00 2.74
3013 3550 6.324254 GGTTAGGAGATAGAAAGAGCCTGTAA 59.676 42.308 0.00 0.00 0.00 2.41
3014 3551 7.147707 GGTTAGGAGATAGAAAGAGCCTGTAAA 60.148 40.741 0.00 0.00 0.00 2.01
3015 3552 6.875972 AGGAGATAGAAAGAGCCTGTAAAA 57.124 37.500 0.00 0.00 0.00 1.52
3016 3553 7.444703 AGGAGATAGAAAGAGCCTGTAAAAT 57.555 36.000 0.00 0.00 0.00 1.82
3017 3554 7.505258 AGGAGATAGAAAGAGCCTGTAAAATC 58.495 38.462 0.00 0.00 0.00 2.17
3018 3555 7.126421 AGGAGATAGAAAGAGCCTGTAAAATCA 59.874 37.037 0.00 0.00 0.00 2.57
3019 3556 7.936301 GGAGATAGAAAGAGCCTGTAAAATCAT 59.064 37.037 0.00 0.00 0.00 2.45
3020 3557 8.674263 AGATAGAAAGAGCCTGTAAAATCATG 57.326 34.615 0.00 0.00 0.00 3.07
3021 3558 8.270744 AGATAGAAAGAGCCTGTAAAATCATGT 58.729 33.333 0.00 0.00 0.00 3.21
3022 3559 9.547753 GATAGAAAGAGCCTGTAAAATCATGTA 57.452 33.333 0.00 0.00 0.00 2.29
3024 3561 8.814038 AGAAAGAGCCTGTAAAATCATGTATT 57.186 30.769 0.00 0.00 0.00 1.89
3025 3562 9.247861 AGAAAGAGCCTGTAAAATCATGTATTT 57.752 29.630 0.00 0.00 39.56 1.40
3026 3563 9.294030 GAAAGAGCCTGTAAAATCATGTATTTG 57.706 33.333 8.19 0.00 37.85 2.32
3027 3564 7.944729 AGAGCCTGTAAAATCATGTATTTGT 57.055 32.000 8.19 2.10 37.85 2.83
3028 3565 8.353423 AGAGCCTGTAAAATCATGTATTTGTT 57.647 30.769 8.19 0.00 37.85 2.83
3029 3566 8.806146 AGAGCCTGTAAAATCATGTATTTGTTT 58.194 29.630 8.19 0.00 37.85 2.83
3030 3567 8.761575 AGCCTGTAAAATCATGTATTTGTTTG 57.238 30.769 8.19 0.00 37.85 2.93
3031 3568 8.367156 AGCCTGTAAAATCATGTATTTGTTTGT 58.633 29.630 8.19 0.00 37.85 2.83
3032 3569 9.632807 GCCTGTAAAATCATGTATTTGTTTGTA 57.367 29.630 8.19 0.00 37.85 2.41
3040 3577 7.843490 TCATGTATTTGTTTGTAGGTCTAGC 57.157 36.000 0.00 0.00 0.00 3.42
3041 3578 7.390823 TCATGTATTTGTTTGTAGGTCTAGCA 58.609 34.615 0.00 0.00 0.00 3.49
3042 3579 8.046708 TCATGTATTTGTTTGTAGGTCTAGCAT 58.953 33.333 0.00 0.00 0.00 3.79
3043 3580 8.677300 CATGTATTTGTTTGTAGGTCTAGCATT 58.323 33.333 0.00 0.00 0.00 3.56
3044 3581 8.630054 TGTATTTGTTTGTAGGTCTAGCATTT 57.370 30.769 0.00 0.00 0.00 2.32
3045 3582 9.073475 TGTATTTGTTTGTAGGTCTAGCATTTT 57.927 29.630 0.00 0.00 0.00 1.82
3046 3583 9.908152 GTATTTGTTTGTAGGTCTAGCATTTTT 57.092 29.630 0.00 0.00 0.00 1.94
3047 3584 8.816640 ATTTGTTTGTAGGTCTAGCATTTTTG 57.183 30.769 0.00 0.00 0.00 2.44
3048 3585 7.575414 TTGTTTGTAGGTCTAGCATTTTTGA 57.425 32.000 0.00 0.00 0.00 2.69
3049 3586 7.575414 TGTTTGTAGGTCTAGCATTTTTGAA 57.425 32.000 0.00 0.00 0.00 2.69
3050 3587 8.177119 TGTTTGTAGGTCTAGCATTTTTGAAT 57.823 30.769 0.00 0.00 0.00 2.57
3051 3588 8.296713 TGTTTGTAGGTCTAGCATTTTTGAATC 58.703 33.333 0.00 0.00 0.00 2.52
3052 3589 6.662414 TGTAGGTCTAGCATTTTTGAATCG 57.338 37.500 0.00 0.00 0.00 3.34
3053 3590 4.622701 AGGTCTAGCATTTTTGAATCGC 57.377 40.909 0.00 0.00 0.00 4.58
3054 3591 3.378427 AGGTCTAGCATTTTTGAATCGCC 59.622 43.478 0.00 0.00 0.00 5.54
3055 3592 3.378427 GGTCTAGCATTTTTGAATCGCCT 59.622 43.478 0.00 0.00 0.00 5.52
3056 3593 4.142381 GGTCTAGCATTTTTGAATCGCCTT 60.142 41.667 0.00 0.00 0.00 4.35
3057 3594 5.065988 GGTCTAGCATTTTTGAATCGCCTTA 59.934 40.000 0.00 0.00 0.00 2.69
3058 3595 6.195165 GTCTAGCATTTTTGAATCGCCTTAG 58.805 40.000 0.00 0.00 0.00 2.18
3059 3596 5.880332 TCTAGCATTTTTGAATCGCCTTAGT 59.120 36.000 0.00 0.00 0.00 2.24
3060 3597 4.737054 AGCATTTTTGAATCGCCTTAGTG 58.263 39.130 0.00 0.00 0.00 2.74
3061 3598 4.218417 AGCATTTTTGAATCGCCTTAGTGT 59.782 37.500 0.00 0.00 0.00 3.55
3062 3599 4.324402 GCATTTTTGAATCGCCTTAGTGTG 59.676 41.667 0.00 0.00 0.00 3.82
3063 3600 5.460646 CATTTTTGAATCGCCTTAGTGTGT 58.539 37.500 0.00 0.00 0.00 3.72
3064 3601 4.742438 TTTTGAATCGCCTTAGTGTGTC 57.258 40.909 0.00 0.00 0.00 3.67
3065 3602 3.678056 TTGAATCGCCTTAGTGTGTCT 57.322 42.857 0.00 0.00 0.00 3.41
3199 3746 0.108329 AACGGAGGCATTCTGGTACG 60.108 55.000 1.92 0.00 36.43 3.67
3297 3846 1.747367 CGCTGGCGGACCCATTTAA 60.747 57.895 7.12 0.00 44.33 1.52
3321 3870 0.676782 CTGGGAGCGGTTTTGGGTAG 60.677 60.000 0.00 0.00 0.00 3.18
3413 3963 7.391148 TTTCTGTATAGGTCTTTCCATTTGC 57.609 36.000 0.00 0.00 39.02 3.68
3421 3971 4.655649 AGGTCTTTCCATTTGCTTTTTCCT 59.344 37.500 0.00 0.00 39.02 3.36
3422 3972 5.130975 AGGTCTTTCCATTTGCTTTTTCCTT 59.869 36.000 0.00 0.00 39.02 3.36
3423 3973 5.822519 GGTCTTTCCATTTGCTTTTTCCTTT 59.177 36.000 0.00 0.00 35.97 3.11
3544 4096 9.911788 AGAGATTGAACATTTTCAGGTATATGT 57.088 29.630 0.00 0.00 42.79 2.29
3549 4101 7.970384 TGAACATTTTCAGGTATATGTCGAAC 58.030 34.615 0.00 0.00 36.79 3.95
3550 4102 7.604545 TGAACATTTTCAGGTATATGTCGAACA 59.395 33.333 0.00 0.00 36.79 3.18
3551 4103 8.506168 AACATTTTCAGGTATATGTCGAACAT 57.494 30.769 0.00 0.00 42.35 2.71
3552 4104 8.506168 ACATTTTCAGGTATATGTCGAACATT 57.494 30.769 5.94 0.00 39.88 2.71
3553 4105 8.956426 ACATTTTCAGGTATATGTCGAACATTT 58.044 29.630 5.94 2.26 39.88 2.32
3554 4106 9.787532 CATTTTCAGGTATATGTCGAACATTTT 57.212 29.630 5.94 0.00 39.88 1.82
3556 4108 8.554835 TTTCAGGTATATGTCGAACATTTTCA 57.445 30.769 5.94 0.00 39.88 2.69
3557 4109 8.554835 TTCAGGTATATGTCGAACATTTTCAA 57.445 30.769 5.94 0.00 39.88 2.69
3558 4110 8.554835 TCAGGTATATGTCGAACATTTTCAAA 57.445 30.769 5.94 0.00 39.88 2.69
3559 4111 9.004717 TCAGGTATATGTCGAACATTTTCAAAA 57.995 29.630 5.94 0.00 39.88 2.44
3560 4112 9.619316 CAGGTATATGTCGAACATTTTCAAAAA 57.381 29.630 5.94 0.00 39.88 1.94
3561 4113 9.620660 AGGTATATGTCGAACATTTTCAAAAAC 57.379 29.630 5.94 0.00 39.88 2.43
3562 4114 9.400638 GGTATATGTCGAACATTTTCAAAAACA 57.599 29.630 5.94 0.00 39.88 2.83
3565 4117 7.826260 ATGTCGAACATTTTCAAAAACAAGT 57.174 28.000 0.00 0.00 34.67 3.16
3566 4118 7.644986 TGTCGAACATTTTCAAAAACAAGTT 57.355 28.000 0.00 0.00 0.00 2.66
3567 4119 7.505646 TGTCGAACATTTTCAAAAACAAGTTG 58.494 30.769 0.00 0.00 0.00 3.16
3568 4120 7.382488 TGTCGAACATTTTCAAAAACAAGTTGA 59.618 29.630 10.54 0.00 33.21 3.18
3569 4121 7.682460 GTCGAACATTTTCAAAAACAAGTTGAC 59.318 33.333 10.54 9.56 34.78 3.18
3649 4201 6.042143 AGATGGTGAACATTTTCAAACACAC 58.958 36.000 0.00 0.00 43.52 3.82
3656 4208 8.389603 GTGAACATTTTCAAACACACATTGAAT 58.610 29.630 0.00 0.00 43.52 2.57
3657 4209 9.591792 TGAACATTTTCAAACACACATTGAATA 57.408 25.926 2.88 0.00 43.94 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 6.590234 TTTTTGATAAAAGAAGGGCTCTCC 57.410 37.500 0.00 0.00 31.02 3.71
25 26 6.735694 GCATGTGACTTACTGGACACATTTTT 60.736 38.462 0.00 0.00 46.98 1.94
26 27 5.278463 GCATGTGACTTACTGGACACATTTT 60.278 40.000 0.00 0.00 46.98 1.82
27 28 4.216257 GCATGTGACTTACTGGACACATTT 59.784 41.667 0.00 0.00 46.98 2.32
28 29 3.753272 GCATGTGACTTACTGGACACATT 59.247 43.478 0.00 0.00 46.98 2.71
30 31 2.766313 GCATGTGACTTACTGGACACA 58.234 47.619 0.00 0.00 45.06 3.72
31 32 1.726791 CGCATGTGACTTACTGGACAC 59.273 52.381 0.00 0.00 0.00 3.67
32 33 1.616374 TCGCATGTGACTTACTGGACA 59.384 47.619 4.45 0.00 0.00 4.02
33 34 2.363788 TCGCATGTGACTTACTGGAC 57.636 50.000 4.45 0.00 0.00 4.02
34 35 2.353704 CCTTCGCATGTGACTTACTGGA 60.354 50.000 8.86 0.00 0.00 3.86
35 36 2.002586 CCTTCGCATGTGACTTACTGG 58.997 52.381 8.86 1.35 0.00 4.00
36 37 1.394917 GCCTTCGCATGTGACTTACTG 59.605 52.381 8.86 0.00 34.03 2.74
37 38 1.001974 TGCCTTCGCATGTGACTTACT 59.998 47.619 8.86 0.00 41.12 2.24
38 39 1.394917 CTGCCTTCGCATGTGACTTAC 59.605 52.381 8.86 0.00 46.11 2.34
39 40 1.725641 CTGCCTTCGCATGTGACTTA 58.274 50.000 8.86 0.00 46.11 2.24
40 41 1.580845 GCTGCCTTCGCATGTGACTT 61.581 55.000 8.86 0.00 46.11 3.01
41 42 2.037136 GCTGCCTTCGCATGTGACT 61.037 57.895 8.86 0.00 46.11 3.41
42 43 2.482374 GCTGCCTTCGCATGTGAC 59.518 61.111 8.86 0.00 46.11 3.67
43 44 2.747460 GGCTGCCTTCGCATGTGA 60.747 61.111 12.43 4.45 46.11 3.58
44 45 1.940883 ATTGGCTGCCTTCGCATGTG 61.941 55.000 21.03 0.00 46.11 3.21
45 46 0.394216 TATTGGCTGCCTTCGCATGT 60.394 50.000 21.03 0.00 46.11 3.21
46 47 0.740149 TTATTGGCTGCCTTCGCATG 59.260 50.000 21.03 0.00 46.11 4.06
47 48 1.473258 TTTATTGGCTGCCTTCGCAT 58.527 45.000 21.03 6.67 46.11 4.73
48 49 1.202114 CTTTTATTGGCTGCCTTCGCA 59.798 47.619 21.03 0.00 44.78 5.10
49 50 1.202348 ACTTTTATTGGCTGCCTTCGC 59.798 47.619 21.03 0.00 0.00 4.70
50 51 4.156008 ACTTACTTTTATTGGCTGCCTTCG 59.844 41.667 21.03 3.95 0.00 3.79
80 83 9.708222 CGCATTTCTCTTAATATACATATTGCC 57.292 33.333 4.98 0.00 34.91 4.52
152 155 9.232473 GTTGAGTAGTCTCCCTTTAATTTGAAT 57.768 33.333 0.00 0.00 39.75 2.57
154 157 7.741785 TGTTGAGTAGTCTCCCTTTAATTTGA 58.258 34.615 0.00 0.00 39.75 2.69
155 158 7.979444 TGTTGAGTAGTCTCCCTTTAATTTG 57.021 36.000 0.00 0.00 39.75 2.32
158 161 7.934120 GCATATGTTGAGTAGTCTCCCTTTAAT 59.066 37.037 4.29 0.00 39.75 1.40
160 163 6.382859 TGCATATGTTGAGTAGTCTCCCTTTA 59.617 38.462 4.29 0.00 39.75 1.85
163 166 4.100189 GTGCATATGTTGAGTAGTCTCCCT 59.900 45.833 4.29 0.00 39.75 4.20
164 167 4.141937 TGTGCATATGTTGAGTAGTCTCCC 60.142 45.833 4.29 0.00 39.75 4.30
165 168 5.011090 TGTGCATATGTTGAGTAGTCTCC 57.989 43.478 4.29 0.00 39.75 3.71
207 210 3.353836 CTTCGCACCACCCAACCG 61.354 66.667 0.00 0.00 0.00 4.44
209 212 1.586154 CCATCTTCGCACCACCCAAC 61.586 60.000 0.00 0.00 0.00 3.77
214 217 1.639298 GCACTCCATCTTCGCACCAC 61.639 60.000 0.00 0.00 0.00 4.16
215 218 1.375908 GCACTCCATCTTCGCACCA 60.376 57.895 0.00 0.00 0.00 4.17
216 219 0.745845 ATGCACTCCATCTTCGCACC 60.746 55.000 0.00 0.00 35.02 5.01
220 223 1.306148 ATGCATGCACTCCATCTTCG 58.694 50.000 25.37 0.00 29.71 3.79
243 246 5.296780 ACTTGTTAGATGCGGTATTCAATGG 59.703 40.000 0.00 0.00 0.00 3.16
255 258 1.852895 CGCGTAGGACTTGTTAGATGC 59.147 52.381 0.00 0.00 0.00 3.91
257 260 5.049129 GGTATACGCGTAGGACTTGTTAGAT 60.049 44.000 24.78 6.33 0.00 1.98
258 261 4.273480 GGTATACGCGTAGGACTTGTTAGA 59.727 45.833 24.78 0.00 0.00 2.10
262 265 2.648059 AGGTATACGCGTAGGACTTGT 58.352 47.619 24.78 8.30 0.00 3.16
263 266 3.188048 CCTAGGTATACGCGTAGGACTTG 59.812 52.174 24.78 19.23 45.08 3.16
264 267 3.181450 ACCTAGGTATACGCGTAGGACTT 60.181 47.826 25.95 21.88 45.08 3.01
266 269 2.772287 ACCTAGGTATACGCGTAGGAC 58.228 52.381 25.95 22.99 45.08 3.85
269 272 2.351157 GGCAACCTAGGTATACGCGTAG 60.351 54.545 24.78 11.28 0.00 3.51
272 275 0.386476 TGGCAACCTAGGTATACGCG 59.614 55.000 16.67 3.53 0.00 6.01
273 276 2.607631 TTGGCAACCTAGGTATACGC 57.392 50.000 16.67 15.11 0.00 4.42
274 277 7.442969 TGATAAAATTGGCAACCTAGGTATACG 59.557 37.037 16.67 5.52 0.00 3.06
276 279 7.722285 GGTGATAAAATTGGCAACCTAGGTATA 59.278 37.037 16.67 0.00 0.00 1.47
277 280 6.549736 GGTGATAAAATTGGCAACCTAGGTAT 59.450 38.462 16.67 0.83 0.00 2.73
278 281 5.889289 GGTGATAAAATTGGCAACCTAGGTA 59.111 40.000 16.67 0.00 0.00 3.08
279 282 4.709886 GGTGATAAAATTGGCAACCTAGGT 59.290 41.667 9.21 9.21 0.00 3.08
280 283 4.709397 TGGTGATAAAATTGGCAACCTAGG 59.291 41.667 7.41 7.41 0.00 3.02
281 284 5.913137 TGGTGATAAAATTGGCAACCTAG 57.087 39.130 0.00 0.00 0.00 3.02
282 285 7.962995 TTATGGTGATAAAATTGGCAACCTA 57.037 32.000 0.00 0.00 0.00 3.08
283 286 6.865834 TTATGGTGATAAAATTGGCAACCT 57.134 33.333 0.00 0.00 0.00 3.50
330 333 9.878667 TCAGATGTTCTATTTTCAAACGGTATA 57.121 29.630 0.00 0.00 0.00 1.47
331 334 8.786826 TCAGATGTTCTATTTTCAAACGGTAT 57.213 30.769 0.00 0.00 0.00 2.73
332 335 8.610248 TTCAGATGTTCTATTTTCAAACGGTA 57.390 30.769 0.00 0.00 0.00 4.02
333 336 7.228706 ACTTCAGATGTTCTATTTTCAAACGGT 59.771 33.333 0.00 0.00 0.00 4.83
334 337 7.584987 ACTTCAGATGTTCTATTTTCAAACGG 58.415 34.615 0.00 0.00 0.00 4.44
335 338 9.450807 AAACTTCAGATGTTCTATTTTCAAACG 57.549 29.630 2.28 0.00 0.00 3.60
384 387 9.920946 ATTTGACCAACCTAATACAAGTCATAT 57.079 29.630 0.00 0.00 33.21 1.78
385 388 9.747898 AATTTGACCAACCTAATACAAGTCATA 57.252 29.630 0.00 0.00 33.21 2.15
387 390 7.721842 TCAATTTGACCAACCTAATACAAGTCA 59.278 33.333 0.00 0.00 0.00 3.41
388 391 8.021396 GTCAATTTGACCAACCTAATACAAGTC 58.979 37.037 17.07 0.00 41.37 3.01
389 392 7.308348 CGTCAATTTGACCAACCTAATACAAGT 60.308 37.037 20.87 0.00 44.20 3.16
390 393 7.021196 CGTCAATTTGACCAACCTAATACAAG 58.979 38.462 20.87 1.46 44.20 3.16
393 396 6.540205 GTCGTCAATTTGACCAACCTAATAC 58.460 40.000 20.87 5.03 44.20 1.89
404 407 2.027469 ACCCCTAGGTCGTCAATTTGAC 60.027 50.000 17.76 17.76 46.45 3.18
405 408 2.262637 ACCCCTAGGTCGTCAATTTGA 58.737 47.619 8.29 0.00 46.45 2.69
407 410 2.167075 CGTACCCCTAGGTCGTCAATTT 59.833 50.000 8.29 0.00 46.45 1.82
408 411 1.753073 CGTACCCCTAGGTCGTCAATT 59.247 52.381 8.29 0.00 46.45 2.32
409 412 1.396653 CGTACCCCTAGGTCGTCAAT 58.603 55.000 8.29 0.00 46.45 2.57
411 414 1.750399 GCGTACCCCTAGGTCGTCA 60.750 63.158 8.29 0.00 46.45 4.35
412 415 2.828128 CGCGTACCCCTAGGTCGTC 61.828 68.421 8.29 3.46 46.45 4.20
413 416 2.825836 CGCGTACCCCTAGGTCGT 60.826 66.667 8.29 6.00 46.45 4.34
414 417 4.261781 GCGCGTACCCCTAGGTCG 62.262 72.222 8.43 8.12 46.45 4.79
415 418 3.142838 TGCGCGTACCCCTAGGTC 61.143 66.667 8.43 0.00 46.45 3.85
417 420 4.564116 CGTGCGCGTACCCCTAGG 62.564 72.222 21.71 0.06 40.04 3.02
424 427 4.781959 TACAGGGCGTGCGCGTAC 62.782 66.667 22.18 17.94 43.06 3.67
427 430 4.439472 GTTTACAGGGCGTGCGCG 62.439 66.667 16.86 16.86 43.06 6.86
428 431 3.047877 AGTTTACAGGGCGTGCGC 61.048 61.111 7.17 8.17 41.06 6.09
430 433 0.320421 TCTCAGTTTACAGGGCGTGC 60.320 55.000 7.17 0.00 0.00 5.34
431 434 1.272490 TCTCTCAGTTTACAGGGCGTG 59.728 52.381 5.50 5.50 0.00 5.34
432 435 1.546476 CTCTCTCAGTTTACAGGGCGT 59.454 52.381 0.00 0.00 0.00 5.68
433 436 1.819288 TCTCTCTCAGTTTACAGGGCG 59.181 52.381 0.00 0.00 0.00 6.13
434 437 2.167487 CCTCTCTCTCAGTTTACAGGGC 59.833 54.545 0.00 0.00 0.00 5.19
435 438 3.436243 ACCTCTCTCTCAGTTTACAGGG 58.564 50.000 0.00 0.00 0.00 4.45
437 440 7.107542 ACTACTACCTCTCTCTCAGTTTACAG 58.892 42.308 0.00 0.00 0.00 2.74
438 441 7.018487 ACTACTACCTCTCTCTCAGTTTACA 57.982 40.000 0.00 0.00 0.00 2.41
439 442 8.260114 ACTACTACTACCTCTCTCTCAGTTTAC 58.740 40.741 0.00 0.00 0.00 2.01
441 444 7.261688 ACTACTACTACCTCTCTCTCAGTTT 57.738 40.000 0.00 0.00 0.00 2.66
443 446 6.879367 AACTACTACTACCTCTCTCTCAGT 57.121 41.667 0.00 0.00 0.00 3.41
444 447 8.867097 AGATAACTACTACTACCTCTCTCTCAG 58.133 40.741 0.00 0.00 0.00 3.35
446 449 9.086758 AGAGATAACTACTACTACCTCTCTCTC 57.913 40.741 0.00 0.00 34.62 3.20
448 451 9.485206 CAAGAGATAACTACTACTACCTCTCTC 57.515 40.741 0.00 0.00 37.76 3.20
449 452 7.935210 GCAAGAGATAACTACTACTACCTCTCT 59.065 40.741 0.00 0.00 39.79 3.10
450 453 7.935210 AGCAAGAGATAACTACTACTACCTCTC 59.065 40.741 0.00 0.00 0.00 3.20
451 454 7.808218 AGCAAGAGATAACTACTACTACCTCT 58.192 38.462 0.00 0.00 0.00 3.69
452 455 7.935210 AGAGCAAGAGATAACTACTACTACCTC 59.065 40.741 0.00 0.00 0.00 3.85
453 456 7.808218 AGAGCAAGAGATAACTACTACTACCT 58.192 38.462 0.00 0.00 0.00 3.08
454 457 9.558396 TTAGAGCAAGAGATAACTACTACTACC 57.442 37.037 0.00 0.00 0.00 3.18
456 459 9.558396 GGTTAGAGCAAGAGATAACTACTACTA 57.442 37.037 0.00 0.00 0.00 1.82
457 460 8.053963 TGGTTAGAGCAAGAGATAACTACTACT 58.946 37.037 0.00 0.00 0.00 2.57
458 461 8.130469 GTGGTTAGAGCAAGAGATAACTACTAC 58.870 40.741 0.00 0.00 36.94 2.73
461 464 6.127423 TGGTGGTTAGAGCAAGAGATAACTAC 60.127 42.308 0.00 0.00 38.28 2.73
462 465 5.955959 TGGTGGTTAGAGCAAGAGATAACTA 59.044 40.000 0.00 0.00 0.00 2.24
464 467 5.086104 TGGTGGTTAGAGCAAGAGATAAC 57.914 43.478 0.00 0.00 0.00 1.89
465 468 5.755409 TTGGTGGTTAGAGCAAGAGATAA 57.245 39.130 0.00 0.00 0.00 1.75
466 469 5.755409 TTTGGTGGTTAGAGCAAGAGATA 57.245 39.130 0.00 0.00 34.93 1.98
472 642 6.013379 TGGATTATTTTGGTGGTTAGAGCAA 58.987 36.000 0.00 0.00 0.00 3.91
473 643 5.417580 GTGGATTATTTTGGTGGTTAGAGCA 59.582 40.000 0.00 0.00 0.00 4.26
474 644 5.448632 CGTGGATTATTTTGGTGGTTAGAGC 60.449 44.000 0.00 0.00 0.00 4.09
477 647 4.097286 CCCGTGGATTATTTTGGTGGTTAG 59.903 45.833 0.00 0.00 0.00 2.34
486 656 2.525105 AGTGGCCCGTGGATTATTTT 57.475 45.000 0.00 0.00 0.00 1.82
491 661 0.907704 TGAGTAGTGGCCCGTGGATT 60.908 55.000 0.00 0.00 0.00 3.01
497 667 1.215647 GTCAGTGAGTAGTGGCCCG 59.784 63.158 0.00 0.00 0.00 6.13
506 676 2.375146 GGTTGGTTTTGGTCAGTGAGT 58.625 47.619 0.00 0.00 0.00 3.41
507 677 1.333619 CGGTTGGTTTTGGTCAGTGAG 59.666 52.381 0.00 0.00 0.00 3.51
508 678 1.065345 TCGGTTGGTTTTGGTCAGTGA 60.065 47.619 0.00 0.00 0.00 3.41
509 679 1.384525 TCGGTTGGTTTTGGTCAGTG 58.615 50.000 0.00 0.00 0.00 3.66
510 680 1.953686 CATCGGTTGGTTTTGGTCAGT 59.046 47.619 0.00 0.00 0.00 3.41
511 681 1.269448 CCATCGGTTGGTTTTGGTCAG 59.731 52.381 0.00 0.00 40.99 3.51
512 682 1.133761 TCCATCGGTTGGTTTTGGTCA 60.134 47.619 5.07 0.00 46.52 4.02
513 683 1.611519 TCCATCGGTTGGTTTTGGTC 58.388 50.000 5.07 0.00 46.52 4.02
515 685 1.960689 AGTTCCATCGGTTGGTTTTGG 59.039 47.619 5.07 0.00 46.52 3.28
516 686 2.621055 TGAGTTCCATCGGTTGGTTTTG 59.379 45.455 5.07 0.00 46.52 2.44
517 687 2.621526 GTGAGTTCCATCGGTTGGTTTT 59.378 45.455 5.07 0.00 46.52 2.43
518 688 2.227194 GTGAGTTCCATCGGTTGGTTT 58.773 47.619 5.07 0.00 46.52 3.27
519 689 1.142060 TGTGAGTTCCATCGGTTGGTT 59.858 47.619 5.07 0.00 46.52 3.67
520 690 0.762418 TGTGAGTTCCATCGGTTGGT 59.238 50.000 5.07 0.00 46.52 3.67
522 692 2.616376 TGTTTGTGAGTTCCATCGGTTG 59.384 45.455 0.00 0.00 0.00 3.77
523 693 2.925724 TGTTTGTGAGTTCCATCGGTT 58.074 42.857 0.00 0.00 0.00 4.44
524 694 2.631160 TGTTTGTGAGTTCCATCGGT 57.369 45.000 0.00 0.00 0.00 4.69
525 695 4.503910 TCTATGTTTGTGAGTTCCATCGG 58.496 43.478 0.00 0.00 0.00 4.18
526 696 5.869344 TCTTCTATGTTTGTGAGTTCCATCG 59.131 40.000 0.00 0.00 0.00 3.84
527 697 7.201679 CCATCTTCTATGTTTGTGAGTTCCATC 60.202 40.741 0.00 0.00 0.00 3.51
528 698 6.600822 CCATCTTCTATGTTTGTGAGTTCCAT 59.399 38.462 0.00 0.00 0.00 3.41
529 699 5.939883 CCATCTTCTATGTTTGTGAGTTCCA 59.060 40.000 0.00 0.00 0.00 3.53
530 700 6.173339 TCCATCTTCTATGTTTGTGAGTTCC 58.827 40.000 0.00 0.00 0.00 3.62
531 701 6.876257 ACTCCATCTTCTATGTTTGTGAGTTC 59.124 38.462 0.00 0.00 0.00 3.01
532 702 6.773638 ACTCCATCTTCTATGTTTGTGAGTT 58.226 36.000 0.00 0.00 0.00 3.01
533 703 6.365970 ACTCCATCTTCTATGTTTGTGAGT 57.634 37.500 0.00 0.00 0.00 3.41
534 704 7.323420 TGTACTCCATCTTCTATGTTTGTGAG 58.677 38.462 0.00 0.00 0.00 3.51
535 705 7.239763 TGTACTCCATCTTCTATGTTTGTGA 57.760 36.000 0.00 0.00 0.00 3.58
536 706 9.599866 TTATGTACTCCATCTTCTATGTTTGTG 57.400 33.333 0.00 0.00 34.86 3.33
537 707 9.823647 CTTATGTACTCCATCTTCTATGTTTGT 57.176 33.333 0.00 0.00 34.86 2.83
538 708 9.823647 ACTTATGTACTCCATCTTCTATGTTTG 57.176 33.333 0.00 0.00 34.86 2.93
597 767 6.197468 GGAAATATCTTCTATAGCGCATCGAC 59.803 42.308 11.47 0.00 0.00 4.20
621 795 8.410141 TGTCTTACTAGAATTTTGGTGTTTTGG 58.590 33.333 0.00 0.00 30.65 3.28
674 848 6.475596 ACTACAACTATATTAACACCGCCT 57.524 37.500 0.00 0.00 0.00 5.52
678 852 9.322773 GAAGGGAACTACAACTATATTAACACC 57.677 37.037 0.00 0.00 42.68 4.16
679 853 9.028185 CGAAGGGAACTACAACTATATTAACAC 57.972 37.037 0.00 0.00 42.68 3.32
697 871 1.821216 GGCATTCAGTTCGAAGGGAA 58.179 50.000 12.30 12.30 36.95 3.97
701 875 1.425428 GCCGGCATTCAGTTCGAAG 59.575 57.895 24.80 0.00 36.95 3.79
744 918 1.807139 ATTCAAATTTGGCGCCAACC 58.193 45.000 40.36 8.09 35.46 3.77
764 938 1.957113 GCTGGCAGGCAAGAACCTAAT 60.957 52.381 17.64 0.00 38.26 1.73
791 965 4.556699 GCAGTTGGTGATTGTTGTAGGAAC 60.557 45.833 0.00 0.00 0.00 3.62
798 972 3.005050 ACTCATGCAGTTGGTGATTGTTG 59.995 43.478 0.00 0.00 26.56 3.33
802 976 3.256631 GGAAACTCATGCAGTTGGTGATT 59.743 43.478 10.14 0.00 45.32 2.57
807 1191 3.017265 GTTGGAAACTCATGCAGTTGG 57.983 47.619 10.14 0.00 45.32 3.77
823 1207 3.568007 TCCTTCTTTTGTCGATTGGTTGG 59.432 43.478 0.00 0.00 0.00 3.77
882 1266 5.336213 GCCATCCATGCATTTCCTACATAAG 60.336 44.000 0.00 0.00 0.00 1.73
888 1272 3.811810 GCTAGCCATCCATGCATTTCCTA 60.812 47.826 2.29 0.00 0.00 2.94
981 1371 1.909700 TGTGGCATGGGTTTCTTCTC 58.090 50.000 0.00 0.00 0.00 2.87
1010 1400 1.306148 CATGCATGGAGTACAGCTGG 58.694 55.000 19.40 0.00 0.00 4.85
1035 1447 5.520376 ACTTGGAGGTTGAAACTTGAATG 57.480 39.130 0.00 0.00 0.00 2.67
1036 1448 6.126409 TGTACTTGGAGGTTGAAACTTGAAT 58.874 36.000 0.00 0.00 0.00 2.57
1037 1449 5.502079 TGTACTTGGAGGTTGAAACTTGAA 58.498 37.500 0.00 0.00 0.00 2.69
1038 1450 5.105567 TGTACTTGGAGGTTGAAACTTGA 57.894 39.130 0.00 0.00 0.00 3.02
1039 1451 4.881850 ACTGTACTTGGAGGTTGAAACTTG 59.118 41.667 0.00 0.00 0.00 3.16
1040 1452 4.881850 CACTGTACTTGGAGGTTGAAACTT 59.118 41.667 0.00 0.00 0.00 2.66
1041 1453 4.451900 CACTGTACTTGGAGGTTGAAACT 58.548 43.478 0.00 0.00 0.00 2.66
1042 1454 3.003378 GCACTGTACTTGGAGGTTGAAAC 59.997 47.826 0.00 0.00 0.00 2.78
1043 1455 3.211045 GCACTGTACTTGGAGGTTGAAA 58.789 45.455 0.00 0.00 0.00 2.69
1329 1788 2.105128 CGGAGGAGCATGACGGAC 59.895 66.667 0.00 0.00 0.00 4.79
1791 2250 0.676782 CGGCGTTGGGGAAGAAATCT 60.677 55.000 0.00 0.00 0.00 2.40
2568 3051 0.690411 CCTCCTCCATGCTCACCTCT 60.690 60.000 0.00 0.00 0.00 3.69
2619 3102 4.626081 GTGGGCACGAGCACCAGT 62.626 66.667 13.57 0.00 46.13 4.00
2671 3154 2.672961 ACTGTATTAGCAGCGCAAGA 57.327 45.000 11.47 0.00 39.96 3.02
2675 3158 1.140816 GCCTACTGTATTAGCAGCGC 58.859 55.000 0.00 0.00 39.96 5.92
2686 3169 5.815581 TGTAAAAGGATTGATGCCTACTGT 58.184 37.500 0.00 0.00 33.76 3.55
2687 3170 6.319658 ACATGTAAAAGGATTGATGCCTACTG 59.680 38.462 0.00 0.00 33.76 2.74
2689 3172 6.095440 ACACATGTAAAAGGATTGATGCCTAC 59.905 38.462 0.00 0.00 33.76 3.18
2789 3320 6.095860 CCCTCATTATTGTTCATGTCACACAT 59.904 38.462 0.00 0.00 39.91 3.21
2847 3384 2.373938 CGATTCCCTCGCAACACTC 58.626 57.895 0.00 0.00 41.14 3.51
2861 3398 3.871594 GTGTAGCATTACTGAAGGCGATT 59.128 43.478 0.00 0.00 46.89 3.34
2869 3406 4.618067 CGTTTGTACGTGTAGCATTACTGA 59.382 41.667 0.00 0.00 42.72 3.41
2870 3407 4.866766 CGTTTGTACGTGTAGCATTACTG 58.133 43.478 0.00 0.00 42.72 2.74
2885 3422 7.664082 TGTAAAATCCCGTAAATCGTTTGTA 57.336 32.000 0.00 0.00 37.94 2.41
2886 3423 6.557291 TGTAAAATCCCGTAAATCGTTTGT 57.443 33.333 0.00 0.00 37.94 2.83
2887 3424 7.804129 TCTTTGTAAAATCCCGTAAATCGTTTG 59.196 33.333 0.00 0.00 37.94 2.93
2888 3425 7.873910 TCTTTGTAAAATCCCGTAAATCGTTT 58.126 30.769 0.00 0.00 37.94 3.60
2889 3426 7.361457 CCTCTTTGTAAAATCCCGTAAATCGTT 60.361 37.037 0.00 0.00 37.94 3.85
2891 3428 6.093082 ACCTCTTTGTAAAATCCCGTAAATCG 59.907 38.462 0.00 0.00 39.52 3.34
2892 3429 7.387119 ACCTCTTTGTAAAATCCCGTAAATC 57.613 36.000 0.00 0.00 0.00 2.17
2894 3431 7.585579 AAACCTCTTTGTAAAATCCCGTAAA 57.414 32.000 0.00 0.00 0.00 2.01
2895 3432 7.094677 GCTAAACCTCTTTGTAAAATCCCGTAA 60.095 37.037 0.00 0.00 0.00 3.18
2896 3433 6.372381 GCTAAACCTCTTTGTAAAATCCCGTA 59.628 38.462 0.00 0.00 0.00 4.02
2897 3434 5.182570 GCTAAACCTCTTTGTAAAATCCCGT 59.817 40.000 0.00 0.00 0.00 5.28
2898 3435 5.414765 AGCTAAACCTCTTTGTAAAATCCCG 59.585 40.000 0.00 0.00 0.00 5.14
2899 3436 6.835819 AGCTAAACCTCTTTGTAAAATCCC 57.164 37.500 0.00 0.00 0.00 3.85
2900 3437 7.882179 TCAAGCTAAACCTCTTTGTAAAATCC 58.118 34.615 0.00 0.00 0.00 3.01
2901 3438 9.914131 AATCAAGCTAAACCTCTTTGTAAAATC 57.086 29.630 0.00 0.00 0.00 2.17
2903 3440 8.141268 CCAATCAAGCTAAACCTCTTTGTAAAA 58.859 33.333 0.00 0.00 0.00 1.52
2906 3443 6.303839 ACCAATCAAGCTAAACCTCTTTGTA 58.696 36.000 0.00 0.00 0.00 2.41
2907 3444 5.140454 ACCAATCAAGCTAAACCTCTTTGT 58.860 37.500 0.00 0.00 0.00 2.83
2908 3445 5.241506 TGACCAATCAAGCTAAACCTCTTTG 59.758 40.000 0.00 0.00 0.00 2.77
2909 3446 5.385198 TGACCAATCAAGCTAAACCTCTTT 58.615 37.500 0.00 0.00 0.00 2.52
2910 3447 4.985538 TGACCAATCAAGCTAAACCTCTT 58.014 39.130 0.00 0.00 0.00 2.85
2911 3448 4.640771 TGACCAATCAAGCTAAACCTCT 57.359 40.909 0.00 0.00 0.00 3.69
2923 3460 5.964477 ACCTCTCTTACCTATTGACCAATCA 59.036 40.000 0.00 0.00 32.50 2.57
2924 3461 6.284459 CACCTCTCTTACCTATTGACCAATC 58.716 44.000 0.00 0.00 32.50 2.67
2925 3462 5.131142 CCACCTCTCTTACCTATTGACCAAT 59.869 44.000 0.64 0.64 34.93 3.16
2926 3463 4.469945 CCACCTCTCTTACCTATTGACCAA 59.530 45.833 0.00 0.00 0.00 3.67
2927 3464 4.030913 CCACCTCTCTTACCTATTGACCA 58.969 47.826 0.00 0.00 0.00 4.02
2928 3465 3.181464 GCCACCTCTCTTACCTATTGACC 60.181 52.174 0.00 0.00 0.00 4.02
2929 3466 3.181464 GGCCACCTCTCTTACCTATTGAC 60.181 52.174 0.00 0.00 0.00 3.18
2930 3467 3.039011 GGCCACCTCTCTTACCTATTGA 58.961 50.000 0.00 0.00 0.00 2.57
2931 3468 2.104963 GGGCCACCTCTCTTACCTATTG 59.895 54.545 4.39 0.00 0.00 1.90
2932 3469 2.293586 TGGGCCACCTCTCTTACCTATT 60.294 50.000 0.00 0.00 37.76 1.73
2933 3470 1.294068 TGGGCCACCTCTCTTACCTAT 59.706 52.381 0.00 0.00 37.76 2.57
2934 3471 0.714180 TGGGCCACCTCTCTTACCTA 59.286 55.000 0.00 0.00 37.76 3.08
2935 3472 0.910088 GTGGGCCACCTCTCTTACCT 60.910 60.000 26.51 0.00 37.76 3.08
2936 3473 1.602771 GTGGGCCACCTCTCTTACC 59.397 63.158 26.51 0.00 37.76 2.85
2946 3483 2.746947 ATTTTCAGGGGGTGGGCCAC 62.747 60.000 28.69 28.69 37.49 5.01
2947 3484 2.454459 GATTTTCAGGGGGTGGGCCA 62.454 60.000 0.00 0.00 36.17 5.36
2948 3485 1.685765 GATTTTCAGGGGGTGGGCC 60.686 63.158 0.00 0.00 0.00 5.80
2949 3486 0.972471 CTGATTTTCAGGGGGTGGGC 60.972 60.000 0.00 0.00 40.71 5.36
2950 3487 0.704076 TCTGATTTTCAGGGGGTGGG 59.296 55.000 4.78 0.00 44.39 4.61
2951 3488 2.134789 CTCTGATTTTCAGGGGGTGG 57.865 55.000 4.78 0.00 41.25 4.61
2956 3493 4.263949 ACTTTACCCCTCTGATTTTCAGGG 60.264 45.833 4.78 1.10 44.51 4.45
2957 3494 4.923415 ACTTTACCCCTCTGATTTTCAGG 58.077 43.478 4.78 0.00 44.39 3.86
2958 3495 6.265422 ACAAACTTTACCCCTCTGATTTTCAG 59.735 38.462 0.00 0.00 45.59 3.02
2959 3496 6.040391 CACAAACTTTACCCCTCTGATTTTCA 59.960 38.462 0.00 0.00 0.00 2.69
2960 3497 6.264518 TCACAAACTTTACCCCTCTGATTTTC 59.735 38.462 0.00 0.00 0.00 2.29
2961 3498 6.133356 TCACAAACTTTACCCCTCTGATTTT 58.867 36.000 0.00 0.00 0.00 1.82
2962 3499 5.701224 TCACAAACTTTACCCCTCTGATTT 58.299 37.500 0.00 0.00 0.00 2.17
2963 3500 5.319043 TCACAAACTTTACCCCTCTGATT 57.681 39.130 0.00 0.00 0.00 2.57
2964 3501 4.993705 TCACAAACTTTACCCCTCTGAT 57.006 40.909 0.00 0.00 0.00 2.90
2965 3502 4.993705 ATCACAAACTTTACCCCTCTGA 57.006 40.909 0.00 0.00 0.00 3.27
2966 3503 4.218417 CCAATCACAAACTTTACCCCTCTG 59.782 45.833 0.00 0.00 0.00 3.35
2967 3504 4.141018 ACCAATCACAAACTTTACCCCTCT 60.141 41.667 0.00 0.00 0.00 3.69
2968 3505 4.149598 ACCAATCACAAACTTTACCCCTC 58.850 43.478 0.00 0.00 0.00 4.30
2969 3506 4.193240 ACCAATCACAAACTTTACCCCT 57.807 40.909 0.00 0.00 0.00 4.79
2970 3507 4.948341 AACCAATCACAAACTTTACCCC 57.052 40.909 0.00 0.00 0.00 4.95
2971 3508 5.771165 TCCTAACCAATCACAAACTTTACCC 59.229 40.000 0.00 0.00 0.00 3.69
2972 3509 6.713450 TCTCCTAACCAATCACAAACTTTACC 59.287 38.462 0.00 0.00 0.00 2.85
2973 3510 7.739498 TCTCCTAACCAATCACAAACTTTAC 57.261 36.000 0.00 0.00 0.00 2.01
2974 3511 9.667107 CTATCTCCTAACCAATCACAAACTTTA 57.333 33.333 0.00 0.00 0.00 1.85
2975 3512 8.383175 TCTATCTCCTAACCAATCACAAACTTT 58.617 33.333 0.00 0.00 0.00 2.66
2976 3513 7.918076 TCTATCTCCTAACCAATCACAAACTT 58.082 34.615 0.00 0.00 0.00 2.66
2977 3514 7.496346 TCTATCTCCTAACCAATCACAAACT 57.504 36.000 0.00 0.00 0.00 2.66
2978 3515 8.561738 TTTCTATCTCCTAACCAATCACAAAC 57.438 34.615 0.00 0.00 0.00 2.93
2979 3516 8.602424 TCTTTCTATCTCCTAACCAATCACAAA 58.398 33.333 0.00 0.00 0.00 2.83
2980 3517 8.146053 TCTTTCTATCTCCTAACCAATCACAA 57.854 34.615 0.00 0.00 0.00 3.33
2981 3518 7.633772 GCTCTTTCTATCTCCTAACCAATCACA 60.634 40.741 0.00 0.00 0.00 3.58
2982 3519 6.704050 GCTCTTTCTATCTCCTAACCAATCAC 59.296 42.308 0.00 0.00 0.00 3.06
2983 3520 6.183361 GGCTCTTTCTATCTCCTAACCAATCA 60.183 42.308 0.00 0.00 0.00 2.57
2984 3521 6.042666 AGGCTCTTTCTATCTCCTAACCAATC 59.957 42.308 0.00 0.00 0.00 2.67
2985 3522 5.908247 AGGCTCTTTCTATCTCCTAACCAAT 59.092 40.000 0.00 0.00 0.00 3.16
2986 3523 5.129485 CAGGCTCTTTCTATCTCCTAACCAA 59.871 44.000 0.00 0.00 0.00 3.67
2987 3524 4.651503 CAGGCTCTTTCTATCTCCTAACCA 59.348 45.833 0.00 0.00 0.00 3.67
2988 3525 4.651962 ACAGGCTCTTTCTATCTCCTAACC 59.348 45.833 0.00 0.00 0.00 2.85
2989 3526 5.862678 ACAGGCTCTTTCTATCTCCTAAC 57.137 43.478 0.00 0.00 0.00 2.34
2990 3527 7.973048 TTTACAGGCTCTTTCTATCTCCTAA 57.027 36.000 0.00 0.00 0.00 2.69
2991 3528 7.973048 TTTTACAGGCTCTTTCTATCTCCTA 57.027 36.000 0.00 0.00 0.00 2.94
2992 3529 6.875972 TTTTACAGGCTCTTTCTATCTCCT 57.124 37.500 0.00 0.00 0.00 3.69
2993 3530 7.275920 TGATTTTACAGGCTCTTTCTATCTCC 58.724 38.462 0.00 0.00 0.00 3.71
2994 3531 8.772705 CATGATTTTACAGGCTCTTTCTATCTC 58.227 37.037 0.00 0.00 0.00 2.75
2995 3532 8.270744 ACATGATTTTACAGGCTCTTTCTATCT 58.729 33.333 0.00 0.00 0.00 1.98
2996 3533 8.443953 ACATGATTTTACAGGCTCTTTCTATC 57.556 34.615 0.00 0.00 0.00 2.08
2998 3535 9.905713 AATACATGATTTTACAGGCTCTTTCTA 57.094 29.630 0.00 0.00 0.00 2.10
2999 3536 8.814038 AATACATGATTTTACAGGCTCTTTCT 57.186 30.769 0.00 0.00 0.00 2.52
3000 3537 9.294030 CAAATACATGATTTTACAGGCTCTTTC 57.706 33.333 0.00 0.00 35.45 2.62
3001 3538 8.806146 ACAAATACATGATTTTACAGGCTCTTT 58.194 29.630 0.00 0.00 35.45 2.52
3002 3539 8.353423 ACAAATACATGATTTTACAGGCTCTT 57.647 30.769 0.00 0.00 35.45 2.85
3003 3540 7.944729 ACAAATACATGATTTTACAGGCTCT 57.055 32.000 0.00 0.00 35.45 4.09
3004 3541 8.863049 CAAACAAATACATGATTTTACAGGCTC 58.137 33.333 0.00 0.00 35.45 4.70
3005 3542 8.367156 ACAAACAAATACATGATTTTACAGGCT 58.633 29.630 0.00 0.00 35.45 4.58
3006 3543 8.532977 ACAAACAAATACATGATTTTACAGGC 57.467 30.769 0.00 0.00 35.45 4.85
3014 3551 8.893727 GCTAGACCTACAAACAAATACATGATT 58.106 33.333 0.00 0.00 0.00 2.57
3015 3552 8.046708 TGCTAGACCTACAAACAAATACATGAT 58.953 33.333 0.00 0.00 0.00 2.45
3016 3553 7.390823 TGCTAGACCTACAAACAAATACATGA 58.609 34.615 0.00 0.00 0.00 3.07
3017 3554 7.609760 TGCTAGACCTACAAACAAATACATG 57.390 36.000 0.00 0.00 0.00 3.21
3018 3555 8.807948 AATGCTAGACCTACAAACAAATACAT 57.192 30.769 0.00 0.00 0.00 2.29
3019 3556 8.630054 AAATGCTAGACCTACAAACAAATACA 57.370 30.769 0.00 0.00 0.00 2.29
3020 3557 9.908152 AAAAATGCTAGACCTACAAACAAATAC 57.092 29.630 0.00 0.00 0.00 1.89
3021 3558 9.906660 CAAAAATGCTAGACCTACAAACAAATA 57.093 29.630 0.00 0.00 0.00 1.40
3022 3559 8.637986 TCAAAAATGCTAGACCTACAAACAAAT 58.362 29.630 0.00 0.00 0.00 2.32
3023 3560 8.001881 TCAAAAATGCTAGACCTACAAACAAA 57.998 30.769 0.00 0.00 0.00 2.83
3024 3561 7.575414 TCAAAAATGCTAGACCTACAAACAA 57.425 32.000 0.00 0.00 0.00 2.83
3025 3562 7.575414 TTCAAAAATGCTAGACCTACAAACA 57.425 32.000 0.00 0.00 0.00 2.83
3026 3563 7.481798 CGATTCAAAAATGCTAGACCTACAAAC 59.518 37.037 0.00 0.00 0.00 2.93
3027 3564 7.526608 CGATTCAAAAATGCTAGACCTACAAA 58.473 34.615 0.00 0.00 0.00 2.83
3028 3565 6.403200 GCGATTCAAAAATGCTAGACCTACAA 60.403 38.462 0.00 0.00 0.00 2.41
3029 3566 5.064707 GCGATTCAAAAATGCTAGACCTACA 59.935 40.000 0.00 0.00 0.00 2.74
3030 3567 5.502606 GCGATTCAAAAATGCTAGACCTAC 58.497 41.667 0.00 0.00 0.00 3.18
3031 3568 4.574828 GGCGATTCAAAAATGCTAGACCTA 59.425 41.667 0.00 0.00 0.00 3.08
3032 3569 3.378427 GGCGATTCAAAAATGCTAGACCT 59.622 43.478 0.00 0.00 0.00 3.85
3033 3570 3.378427 AGGCGATTCAAAAATGCTAGACC 59.622 43.478 0.00 0.00 0.00 3.85
3034 3571 4.622701 AGGCGATTCAAAAATGCTAGAC 57.377 40.909 0.00 0.00 0.00 2.59
3035 3572 5.880332 ACTAAGGCGATTCAAAAATGCTAGA 59.120 36.000 0.00 0.00 0.00 2.43
3036 3573 5.967674 CACTAAGGCGATTCAAAAATGCTAG 59.032 40.000 0.00 0.00 0.00 3.42
3037 3574 5.414454 ACACTAAGGCGATTCAAAAATGCTA 59.586 36.000 0.00 0.00 0.00 3.49
3038 3575 4.218417 ACACTAAGGCGATTCAAAAATGCT 59.782 37.500 0.00 0.00 0.00 3.79
3039 3576 4.324402 CACACTAAGGCGATTCAAAAATGC 59.676 41.667 0.00 0.00 0.00 3.56
3040 3577 5.460646 ACACACTAAGGCGATTCAAAAATG 58.539 37.500 0.00 0.00 0.00 2.32
3041 3578 5.473504 AGACACACTAAGGCGATTCAAAAAT 59.526 36.000 0.00 0.00 0.00 1.82
3042 3579 4.819630 AGACACACTAAGGCGATTCAAAAA 59.180 37.500 0.00 0.00 0.00 1.94
3043 3580 4.213270 CAGACACACTAAGGCGATTCAAAA 59.787 41.667 0.00 0.00 0.00 2.44
3044 3581 3.745975 CAGACACACTAAGGCGATTCAAA 59.254 43.478 0.00 0.00 0.00 2.69
3045 3582 3.006430 TCAGACACACTAAGGCGATTCAA 59.994 43.478 0.00 0.00 0.00 2.69
3046 3583 2.560981 TCAGACACACTAAGGCGATTCA 59.439 45.455 0.00 0.00 0.00 2.57
3047 3584 3.232213 TCAGACACACTAAGGCGATTC 57.768 47.619 0.00 0.00 0.00 2.52
3048 3585 3.006967 ACTTCAGACACACTAAGGCGATT 59.993 43.478 0.00 0.00 0.00 3.34
3049 3586 2.563179 ACTTCAGACACACTAAGGCGAT 59.437 45.455 0.00 0.00 0.00 4.58
3050 3587 1.961394 ACTTCAGACACACTAAGGCGA 59.039 47.619 0.00 0.00 0.00 5.54
3051 3588 2.061773 CACTTCAGACACACTAAGGCG 58.938 52.381 0.00 0.00 0.00 5.52
3052 3589 3.113260 ACACTTCAGACACACTAAGGC 57.887 47.619 0.00 0.00 0.00 4.35
3053 3590 6.025749 TCATACACTTCAGACACACTAAGG 57.974 41.667 0.00 0.00 0.00 2.69
3054 3591 6.914259 TCTCATACACTTCAGACACACTAAG 58.086 40.000 0.00 0.00 0.00 2.18
3055 3592 6.894339 TCTCATACACTTCAGACACACTAA 57.106 37.500 0.00 0.00 0.00 2.24
3056 3593 6.490381 ACTTCTCATACACTTCAGACACACTA 59.510 38.462 0.00 0.00 0.00 2.74
3057 3594 5.303078 ACTTCTCATACACTTCAGACACACT 59.697 40.000 0.00 0.00 0.00 3.55
3058 3595 5.533482 ACTTCTCATACACTTCAGACACAC 58.467 41.667 0.00 0.00 0.00 3.82
3059 3596 5.791336 ACTTCTCATACACTTCAGACACA 57.209 39.130 0.00 0.00 0.00 3.72
3060 3597 8.764524 ATTTACTTCTCATACACTTCAGACAC 57.235 34.615 0.00 0.00 0.00 3.67
3103 3640 9.338622 GGTGGCTGTATAACTAATGTTATTTCT 57.661 33.333 6.72 0.00 44.35 2.52
3114 3651 2.835389 TGGGTGGTGGCTGTATAACTA 58.165 47.619 0.00 0.00 0.00 2.24
3115 3652 1.663911 TGGGTGGTGGCTGTATAACT 58.336 50.000 0.00 0.00 0.00 2.24
3116 3653 2.500392 TTGGGTGGTGGCTGTATAAC 57.500 50.000 0.00 0.00 0.00 1.89
3171 3708 0.250038 ATGCCTCCGTTGATGGATCG 60.250 55.000 0.00 0.00 37.41 3.69
3199 3746 0.108774 GCTCCCCAAGGGCAGTATAC 59.891 60.000 0.00 0.00 43.94 1.47
3290 3839 1.106285 GCTCCCAGGCACTTAAATGG 58.894 55.000 0.00 0.00 34.60 3.16
3291 3840 0.734889 CGCTCCCAGGCACTTAAATG 59.265 55.000 0.00 0.00 34.60 2.32
3297 3846 3.133365 AAAACCGCTCCCAGGCACT 62.133 57.895 0.00 0.00 43.88 4.40
3321 3870 3.770388 GGTCCTAACCTATCCATAGAGCC 59.230 52.174 0.00 0.00 42.80 4.70
3489 4039 7.708998 AGGAAAGCGTTCAAAGTGTATTTTAA 58.291 30.769 14.40 0.00 35.25 1.52
3490 4040 7.266922 AGGAAAGCGTTCAAAGTGTATTTTA 57.733 32.000 14.40 0.00 35.25 1.52
3496 4046 2.752903 ACAAGGAAAGCGTTCAAAGTGT 59.247 40.909 14.40 8.72 35.25 3.55
3505 4055 4.537135 TCAATCTCTACAAGGAAAGCGT 57.463 40.909 0.00 0.00 0.00 5.07
3506 4056 4.690748 TGTTCAATCTCTACAAGGAAAGCG 59.309 41.667 0.00 0.00 0.00 4.68
3507 4057 6.749923 ATGTTCAATCTCTACAAGGAAAGC 57.250 37.500 0.00 0.00 0.00 3.51
3544 4096 7.148722 GGTCAACTTGTTTTTGAAAATGTTCGA 60.149 33.333 0.00 0.00 34.78 3.71
3545 4097 6.953189 GGTCAACTTGTTTTTGAAAATGTTCG 59.047 34.615 0.00 0.00 34.78 3.95
3549 4101 9.623350 AAAATGGTCAACTTGTTTTTGAAAATG 57.377 25.926 0.00 0.00 34.78 2.32
3551 4103 9.455847 CAAAAATGGTCAACTTGTTTTTGAAAA 57.544 25.926 16.07 0.00 45.50 2.29
3552 4104 8.624776 ACAAAAATGGTCAACTTGTTTTTGAAA 58.375 25.926 22.46 0.00 45.50 2.69
3553 4105 8.159344 ACAAAAATGGTCAACTTGTTTTTGAA 57.841 26.923 22.46 0.00 45.50 2.69
3554 4106 7.736447 ACAAAAATGGTCAACTTGTTTTTGA 57.264 28.000 22.46 0.00 45.50 2.69
3555 4107 9.884465 TTTACAAAAATGGTCAACTTGTTTTTG 57.116 25.926 17.90 17.90 46.82 2.44
3559 4111 9.877178 TGTATTTACAAAAATGGTCAACTTGTT 57.123 25.926 0.00 0.00 36.02 2.83
3560 4112 9.308318 GTGTATTTACAAAAATGGTCAACTTGT 57.692 29.630 0.00 0.00 38.04 3.16
3561 4113 8.476142 CGTGTATTTACAAAAATGGTCAACTTG 58.524 33.333 0.00 0.00 38.04 3.16
3562 4114 8.192110 ACGTGTATTTACAAAAATGGTCAACTT 58.808 29.630 0.00 0.00 38.04 2.66
3563 4115 7.708998 ACGTGTATTTACAAAAATGGTCAACT 58.291 30.769 0.00 0.00 38.04 3.16
3564 4116 7.917720 ACGTGTATTTACAAAAATGGTCAAC 57.082 32.000 0.00 0.00 38.04 3.18
3565 4117 8.188799 TCAACGTGTATTTACAAAAATGGTCAA 58.811 29.630 0.00 0.00 38.04 3.18
3566 4118 7.704271 TCAACGTGTATTTACAAAAATGGTCA 58.296 30.769 0.00 0.00 38.04 4.02
3567 4119 8.473796 GTTCAACGTGTATTTACAAAAATGGTC 58.526 33.333 0.00 0.00 38.04 4.02
3568 4120 8.192110 AGTTCAACGTGTATTTACAAAAATGGT 58.808 29.630 0.00 0.00 38.04 3.55
3569 4121 8.568732 AGTTCAACGTGTATTTACAAAAATGG 57.431 30.769 0.00 0.00 38.04 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.