Multiple sequence alignment - TraesCS5D01G534200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G534200 chr5D 100.000 2612 0 0 1 2612 548459586 548462197 0.000000e+00 4824.0
1 TraesCS5D01G534200 chr5D 83.019 1113 92 56 558 1639 548479261 548480307 0.000000e+00 918.0
2 TraesCS5D01G534200 chr5D 89.726 146 11 4 1473 1618 548374458 548374599 1.600000e-42 183.0
3 TraesCS5D01G534200 chr5D 97.368 38 1 0 1713 1750 548368544 548368581 6.030000e-07 65.8
4 TraesCS5D01G534200 chr5D 97.059 34 1 0 1713 1746 548374849 548374882 1.010000e-04 58.4
5 TraesCS5D01G534200 chr4A 88.854 960 44 28 827 1750 619333528 619334460 0.000000e+00 1122.0
6 TraesCS5D01G534200 chr4A 85.750 793 63 28 862 1639 619369923 619370680 0.000000e+00 793.0
7 TraesCS5D01G534200 chr4A 90.133 375 21 8 1784 2153 619334581 619334944 8.460000e-130 473.0
8 TraesCS5D01G534200 chr4A 80.000 690 74 30 962 1634 619312298 619312940 3.960000e-123 451.0
9 TraesCS5D01G534200 chr4A 87.308 260 26 5 69 327 619332485 619332738 9.140000e-75 291.0
10 TraesCS5D01G534200 chr4A 86.047 215 10 9 515 721 619333140 619333342 2.040000e-51 213.0
11 TraesCS5D01G534200 chr4A 94.286 70 3 1 2 71 619332362 619332430 3.560000e-19 106.0
12 TraesCS5D01G534200 chr4A 93.333 45 2 1 448 491 619332884 619332928 6.030000e-07 65.8
13 TraesCS5D01G534200 chr5B 81.238 1535 140 74 517 1977 692678257 692679717 0.000000e+00 1103.0
14 TraesCS5D01G534200 chr5B 81.818 1111 80 64 558 1636 692690793 692691813 0.000000e+00 821.0
15 TraesCS5D01G534200 chr5B 88.321 137 10 5 1025 1157 692648860 692648994 2.690000e-35 159.0
16 TraesCS5D01G534200 chr5B 85.915 71 7 2 2246 2316 66036452 66036385 3.610000e-09 73.1
17 TraesCS5D01G534200 chr5B 97.368 38 1 0 1713 1750 692635794 692635831 6.030000e-07 65.8
18 TraesCS5D01G534200 chr1A 89.103 156 17 0 2066 2221 395177446 395177601 7.380000e-46 195.0
19 TraesCS5D01G534200 chr7D 88.961 154 16 1 2069 2221 454079230 454079077 3.430000e-44 189.0
20 TraesCS5D01G534200 chr7D 100.000 28 0 0 1403 1430 138177223 138177196 5.000000e-03 52.8
21 TraesCS5D01G534200 chrUn 88.742 151 17 0 2071 2221 81694230 81694080 4.440000e-43 185.0
22 TraesCS5D01G534200 chr7A 88.235 153 18 0 2069 2221 421785158 421785006 1.600000e-42 183.0
23 TraesCS5D01G534200 chr2A 87.342 158 18 2 2065 2221 79316161 79316005 2.070000e-41 180.0
24 TraesCS5D01G534200 chr2A 87.500 152 19 0 2069 2220 549290426 549290275 2.670000e-40 176.0
25 TraesCS5D01G534200 chr5A 87.261 157 17 1 2068 2224 382070114 382069961 2.670000e-40 176.0
26 TraesCS5D01G534200 chr6D 87.097 155 18 2 2068 2221 256728603 256728450 9.610000e-40 174.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G534200 chr5D 548459586 548462197 2611 False 4824.000000 4824 100.0000 1 2612 1 chr5D.!!$F2 2611
1 TraesCS5D01G534200 chr5D 548479261 548480307 1046 False 918.000000 918 83.0190 558 1639 1 chr5D.!!$F3 1081
2 TraesCS5D01G534200 chr4A 619369923 619370680 757 False 793.000000 793 85.7500 862 1639 1 chr4A.!!$F2 777
3 TraesCS5D01G534200 chr4A 619312298 619312940 642 False 451.000000 451 80.0000 962 1634 1 chr4A.!!$F1 672
4 TraesCS5D01G534200 chr4A 619332362 619334944 2582 False 378.466667 1122 89.9935 2 2153 6 chr4A.!!$F3 2151
5 TraesCS5D01G534200 chr5B 692678257 692679717 1460 False 1103.000000 1103 81.2380 517 1977 1 chr5B.!!$F3 1460
6 TraesCS5D01G534200 chr5B 692690793 692691813 1020 False 821.000000 821 81.8180 558 1636 1 chr5B.!!$F4 1078

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 321 0.035458 AACGACCCCTCTCTTGCTTG 59.965 55.0 0.0 0.0 0.0 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1772 2364 0.037882 CTTCTTCTCGAGGCAGTGCA 60.038 55.0 18.61 0.0 0.0 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.582240 GGAAAATCCTGAGGAATAAGGCAG 59.418 45.833 4.76 0.00 34.34 4.85
70 128 6.549736 TCATTCCTGATTAATCTCCACGTAGA 59.450 38.462 16.24 0.00 0.00 2.59
90 148 0.758685 TTGGTTGGGGTTCAAGGCAG 60.759 55.000 0.00 0.00 35.80 4.85
98 156 0.038166 GGTTCAAGGCAGGTGATCCA 59.962 55.000 7.63 0.00 35.68 3.41
132 190 2.273557 GTTTCATGGCCATGTTGCATC 58.726 47.619 38.18 21.92 39.72 3.91
145 203 6.293027 GCCATGTTGCATCCTTTTAATATTGC 60.293 38.462 0.00 0.00 0.00 3.56
158 216 6.639671 TTTAATATTGCCAAATCGTTGCAC 57.360 33.333 0.00 0.00 33.01 4.57
164 222 1.792367 GCCAAATCGTTGCACCTTTTC 59.208 47.619 0.00 0.00 33.01 2.29
165 223 2.050691 CCAAATCGTTGCACCTTTTCG 58.949 47.619 0.00 0.00 33.01 3.46
175 233 5.163893 CGTTGCACCTTTTCGATATTGTACT 60.164 40.000 0.00 0.00 0.00 2.73
206 264 8.470805 AGTACTACTACTTCATTGACATCCTTG 58.529 37.037 0.00 0.00 27.62 3.61
210 268 4.647564 ACTTCATTGACATCCTTGGTCT 57.352 40.909 0.00 0.00 36.26 3.85
253 311 1.640917 AGTACATGTGAACGACCCCT 58.359 50.000 9.11 0.00 0.00 4.79
254 312 1.549170 AGTACATGTGAACGACCCCTC 59.451 52.381 9.11 0.00 0.00 4.30
255 313 1.549170 GTACATGTGAACGACCCCTCT 59.451 52.381 9.11 0.00 0.00 3.69
256 314 0.608640 ACATGTGAACGACCCCTCTC 59.391 55.000 0.00 0.00 0.00 3.20
257 315 0.898320 CATGTGAACGACCCCTCTCT 59.102 55.000 0.00 0.00 0.00 3.10
259 317 0.679505 TGTGAACGACCCCTCTCTTG 59.320 55.000 0.00 0.00 0.00 3.02
260 318 0.670854 GTGAACGACCCCTCTCTTGC 60.671 60.000 0.00 0.00 0.00 4.01
263 321 0.035458 AACGACCCCTCTCTTGCTTG 59.965 55.000 0.00 0.00 0.00 4.01
265 323 1.301293 GACCCCTCTCTTGCTTGGG 59.699 63.158 0.00 0.00 42.23 4.12
275 334 1.830587 CTTGCTTGGGCCCTTTTCCC 61.831 60.000 25.70 5.92 44.17 3.97
285 344 1.071699 GCCCTTTTCCCCTGTTTTTCC 59.928 52.381 0.00 0.00 0.00 3.13
290 349 4.163268 CCTTTTCCCCTGTTTTTCCTTGAA 59.837 41.667 0.00 0.00 0.00 2.69
296 355 3.420839 CTGTTTTTCCTTGAACAGCGT 57.579 42.857 3.63 0.00 44.14 5.07
300 359 5.992729 TGTTTTTCCTTGAACAGCGTATAC 58.007 37.500 0.00 0.00 32.43 1.47
301 360 5.527951 TGTTTTTCCTTGAACAGCGTATACA 59.472 36.000 3.32 0.00 32.43 2.29
302 361 6.205853 TGTTTTTCCTTGAACAGCGTATACAT 59.794 34.615 3.32 0.00 32.43 2.29
303 362 6.811253 TTTTCCTTGAACAGCGTATACATT 57.189 33.333 3.32 0.00 0.00 2.71
304 363 7.908827 TTTTCCTTGAACAGCGTATACATTA 57.091 32.000 3.32 0.00 0.00 1.90
305 364 6.897259 TTCCTTGAACAGCGTATACATTAC 57.103 37.500 3.32 0.00 0.00 1.89
309 368 7.650504 TCCTTGAACAGCGTATACATTACATAC 59.349 37.037 3.32 0.00 0.00 2.39
327 386 2.197324 GCAGGTGGTTGGGTTGGA 59.803 61.111 0.00 0.00 0.00 3.53
328 387 1.903404 GCAGGTGGTTGGGTTGGAG 60.903 63.158 0.00 0.00 0.00 3.86
329 388 1.843421 CAGGTGGTTGGGTTGGAGA 59.157 57.895 0.00 0.00 0.00 3.71
330 389 0.537371 CAGGTGGTTGGGTTGGAGAC 60.537 60.000 0.00 0.00 0.00 3.36
331 390 0.697854 AGGTGGTTGGGTTGGAGACT 60.698 55.000 0.00 0.00 0.00 3.24
332 391 0.185175 GGTGGTTGGGTTGGAGACTT 59.815 55.000 0.00 0.00 0.00 3.01
333 392 1.318576 GTGGTTGGGTTGGAGACTTG 58.681 55.000 0.00 0.00 0.00 3.16
334 393 0.184933 TGGTTGGGTTGGAGACTTGG 59.815 55.000 0.00 0.00 0.00 3.61
335 394 0.476771 GGTTGGGTTGGAGACTTGGA 59.523 55.000 0.00 0.00 0.00 3.53
336 395 1.545651 GGTTGGGTTGGAGACTTGGAG 60.546 57.143 0.00 0.00 0.00 3.86
337 396 0.110486 TTGGGTTGGAGACTTGGAGC 59.890 55.000 0.00 0.00 0.00 4.70
338 397 1.059584 TGGGTTGGAGACTTGGAGCA 61.060 55.000 0.00 0.00 0.00 4.26
339 398 0.322008 GGGTTGGAGACTTGGAGCAG 60.322 60.000 0.00 0.00 0.00 4.24
340 399 0.398318 GGTTGGAGACTTGGAGCAGT 59.602 55.000 0.00 0.00 0.00 4.40
341 400 1.623811 GGTTGGAGACTTGGAGCAGTA 59.376 52.381 0.00 0.00 0.00 2.74
342 401 2.354203 GGTTGGAGACTTGGAGCAGTAG 60.354 54.545 0.00 0.00 0.00 2.57
343 402 2.563179 GTTGGAGACTTGGAGCAGTAGA 59.437 50.000 0.00 0.00 0.00 2.59
344 403 2.451490 TGGAGACTTGGAGCAGTAGAG 58.549 52.381 0.00 0.00 0.00 2.43
345 404 1.754226 GGAGACTTGGAGCAGTAGAGG 59.246 57.143 0.00 0.00 0.00 3.69
346 405 1.754226 GAGACTTGGAGCAGTAGAGGG 59.246 57.143 0.00 0.00 0.00 4.30
347 406 0.827368 GACTTGGAGCAGTAGAGGGG 59.173 60.000 0.00 0.00 0.00 4.79
363 422 2.656069 GGGCCACTCGTTAGCCTCA 61.656 63.158 4.39 0.00 46.31 3.86
373 432 2.304761 TCGTTAGCCTCACCAAAATCCT 59.695 45.455 0.00 0.00 0.00 3.24
374 433 2.678336 CGTTAGCCTCACCAAAATCCTC 59.322 50.000 0.00 0.00 0.00 3.71
377 436 0.332972 GCCTCACCAAAATCCTCCCT 59.667 55.000 0.00 0.00 0.00 4.20
385 444 6.841601 TCACCAAAATCCTCCCTATTATCAG 58.158 40.000 0.00 0.00 0.00 2.90
407 466 6.317140 TCAGATTGCTGGTGTAGATTTCATTC 59.683 38.462 0.00 0.00 42.53 2.67
408 467 6.094464 CAGATTGCTGGTGTAGATTTCATTCA 59.906 38.462 0.00 0.00 38.51 2.57
417 476 8.927411 TGGTGTAGATTTCATTCAGATGAGATA 58.073 33.333 0.00 0.00 42.90 1.98
423 482 9.421806 AGATTTCATTCAGATGAGATAACGATC 57.578 33.333 0.00 0.00 42.90 3.69
427 486 5.363979 TTCAGATGAGATAACGATCGAGG 57.636 43.478 24.34 0.00 37.15 4.63
429 488 4.822350 TCAGATGAGATAACGATCGAGGTT 59.178 41.667 24.34 8.49 37.15 3.50
432 491 2.425668 TGAGATAACGATCGAGGTTGCA 59.574 45.455 24.34 9.99 37.15 4.08
438 497 1.798813 ACGATCGAGGTTGCACTTTTC 59.201 47.619 24.34 0.00 0.00 2.29
439 498 1.798223 CGATCGAGGTTGCACTTTTCA 59.202 47.619 10.26 0.00 0.00 2.69
440 499 2.416547 CGATCGAGGTTGCACTTTTCAT 59.583 45.455 10.26 0.00 0.00 2.57
444 503 4.606961 TCGAGGTTGCACTTTTCATTTTC 58.393 39.130 0.00 0.00 0.00 2.29
447 506 5.506317 CGAGGTTGCACTTTTCATTTTCTCT 60.506 40.000 0.00 0.00 0.00 3.10
448 507 6.225981 AGGTTGCACTTTTCATTTTCTCTT 57.774 33.333 0.00 0.00 0.00 2.85
449 508 6.276091 AGGTTGCACTTTTCATTTTCTCTTC 58.724 36.000 0.00 0.00 0.00 2.87
450 509 5.463392 GGTTGCACTTTTCATTTTCTCTTCC 59.537 40.000 0.00 0.00 0.00 3.46
451 510 5.200368 TGCACTTTTCATTTTCTCTTCCC 57.800 39.130 0.00 0.00 0.00 3.97
452 511 4.229876 GCACTTTTCATTTTCTCTTCCCG 58.770 43.478 0.00 0.00 0.00 5.14
487 592 5.252969 TCTGAATTATTCAACCTGCATGC 57.747 39.130 11.82 11.82 39.58 4.06
488 593 4.031418 TGAATTATTCAACCTGCATGCG 57.969 40.909 14.09 7.87 36.59 4.73
489 594 2.497107 ATTATTCAACCTGCATGCGC 57.503 45.000 14.09 0.00 39.24 6.09
490 595 0.098552 TTATTCAACCTGCATGCGCG 59.901 50.000 14.09 0.00 42.97 6.86
502 607 3.422303 TGCGCGGCATGACAAGTC 61.422 61.111 8.83 0.00 31.71 3.01
503 608 4.166011 GCGCGGCATGACAAGTCC 62.166 66.667 8.83 0.00 0.00 3.85
505 610 2.743752 CGCGGCATGACAAGTCCAG 61.744 63.158 0.00 0.00 0.00 3.86
506 611 1.375908 GCGGCATGACAAGTCCAGA 60.376 57.895 0.00 0.00 0.00 3.86
507 612 1.639298 GCGGCATGACAAGTCCAGAC 61.639 60.000 0.00 0.00 0.00 3.51
508 613 0.036952 CGGCATGACAAGTCCAGACT 60.037 55.000 0.00 0.00 44.94 3.24
509 614 1.204704 CGGCATGACAAGTCCAGACTA 59.795 52.381 0.00 0.00 41.58 2.59
512 617 3.686726 GGCATGACAAGTCCAGACTAAAG 59.313 47.826 0.00 0.00 41.58 1.85
513 618 4.563580 GGCATGACAAGTCCAGACTAAAGA 60.564 45.833 0.00 0.00 41.58 2.52
536 833 2.653890 CCAAAAGCATGACACGACAAG 58.346 47.619 0.00 0.00 0.00 3.16
537 834 2.290367 CCAAAAGCATGACACGACAAGA 59.710 45.455 0.00 0.00 0.00 3.02
541 838 2.681706 AGCATGACACGACAAGAAGAG 58.318 47.619 0.00 0.00 0.00 2.85
542 839 1.127582 GCATGACACGACAAGAAGAGC 59.872 52.381 0.00 0.00 0.00 4.09
544 841 2.595124 TGACACGACAAGAAGAGCAA 57.405 45.000 0.00 0.00 0.00 3.91
551 848 3.007398 ACGACAAGAAGAGCAAAGGAGAT 59.993 43.478 0.00 0.00 0.00 2.75
607 915 1.372087 GCCAAATCGAGCTCACCCAG 61.372 60.000 15.40 0.00 0.00 4.45
625 935 3.005540 GCATGCCCGACCCTTTTGG 62.006 63.158 6.36 0.00 41.37 3.28
752 1075 1.757118 TCGTCCCTGATTGATCTCCAC 59.243 52.381 0.00 0.00 0.00 4.02
802 1129 1.059006 ATGATGCCCTGTCTCCCTCC 61.059 60.000 0.00 0.00 0.00 4.30
806 1135 3.114390 CCCTGTCTCCCTCCCTCT 58.886 66.667 0.00 0.00 0.00 3.69
815 1144 0.415429 TCCCTCCCTCTCTCTGCTTT 59.585 55.000 0.00 0.00 0.00 3.51
822 1151 2.166254 CCCTCTCTCTGCTTTCTGTCTC 59.834 54.545 0.00 0.00 0.00 3.36
828 1215 4.009675 TCTCTGCTTTCTGTCTCTCTCTC 58.990 47.826 0.00 0.00 0.00 3.20
832 1222 4.009675 TGCTTTCTGTCTCTCTCTCTCTC 58.990 47.826 0.00 0.00 0.00 3.20
858 1248 0.843309 TCTCTCACCAAACCTTGCCA 59.157 50.000 0.00 0.00 0.00 4.92
883 1283 2.983592 CCTTGTTCCCCGTGCACC 60.984 66.667 12.15 0.00 0.00 5.01
918 1318 1.221466 CGAGCCAAGAACGCAACTCA 61.221 55.000 0.00 0.00 0.00 3.41
976 1396 2.508663 GCCCTCCGTAGTGTTCGC 60.509 66.667 0.00 0.00 0.00 4.70
1246 1701 3.513680 CCACAGGCACTACATACGTAA 57.486 47.619 0.00 0.00 36.02 3.18
1315 1795 1.261480 AGAAAGCAGCGAGGAGAAGA 58.739 50.000 0.00 0.00 0.00 2.87
1413 1899 4.883300 GCGTACGACGGCGAGGAG 62.883 72.222 22.49 6.76 42.82 3.69
1414 1900 4.233635 CGTACGACGGCGAGGAGG 62.234 72.222 22.49 3.66 41.64 4.30
1415 1901 2.821366 GTACGACGGCGAGGAGGA 60.821 66.667 22.49 0.00 41.64 3.71
1425 1911 2.462782 CGAGGAGGAGGACGACGAC 61.463 68.421 0.00 0.00 0.00 4.34
1640 2141 8.638873 CATATATAATTCTCCATTGCCATGCAT 58.361 33.333 0.00 0.00 38.76 3.96
1641 2142 3.746045 AATTCTCCATTGCCATGCATC 57.254 42.857 0.00 0.00 38.76 3.91
1642 2143 2.146920 TTCTCCATTGCCATGCATCA 57.853 45.000 0.00 0.00 38.76 3.07
1643 2144 2.375014 TCTCCATTGCCATGCATCAT 57.625 45.000 0.00 0.00 38.76 2.45
1644 2145 3.512219 TCTCCATTGCCATGCATCATA 57.488 42.857 0.00 0.00 38.76 2.15
1645 2146 3.834938 TCTCCATTGCCATGCATCATAA 58.165 40.909 0.00 0.00 38.76 1.90
1646 2147 4.216708 TCTCCATTGCCATGCATCATAAA 58.783 39.130 0.00 0.00 38.76 1.40
1647 2148 4.836175 TCTCCATTGCCATGCATCATAAAT 59.164 37.500 0.00 0.00 38.76 1.40
1666 2167 8.717717 TCATAAATTCATAATCCACCTCACTCT 58.282 33.333 0.00 0.00 0.00 3.24
1687 2203 3.175240 CGAGCGAGCAACCGTGAG 61.175 66.667 0.00 0.00 0.00 3.51
1769 2361 0.523966 GCAGCTGTAGAGAGTGTCGT 59.476 55.000 16.64 0.00 0.00 4.34
1770 2362 1.730772 GCAGCTGTAGAGAGTGTCGTG 60.731 57.143 16.64 0.00 0.00 4.35
1772 2364 0.523966 GCTGTAGAGAGTGTCGTGCT 59.476 55.000 0.00 0.00 0.00 4.40
1774 2366 0.241213 TGTAGAGAGTGTCGTGCTGC 59.759 55.000 0.00 0.00 0.00 5.25
1778 2370 1.280886 GAGAGTGTCGTGCTGCACTG 61.281 60.000 28.04 21.09 44.89 3.66
1779 2371 2.947890 GAGTGTCGTGCTGCACTGC 61.948 63.158 28.04 20.33 44.89 4.40
1780 2372 4.017877 GTGTCGTGCTGCACTGCC 62.018 66.667 28.04 16.45 33.22 4.85
1781 2373 4.240103 TGTCGTGCTGCACTGCCT 62.240 61.111 28.04 0.00 31.34 4.75
1816 2419 2.470196 ATATTCGTGTCTGTCCGTCG 57.530 50.000 0.00 0.00 0.00 5.12
1871 2481 1.630369 TCACCAACTATCCTTGCTGCT 59.370 47.619 0.00 0.00 0.00 4.24
1872 2482 1.741706 CACCAACTATCCTTGCTGCTG 59.258 52.381 0.00 0.00 0.00 4.41
1873 2483 0.737219 CCAACTATCCTTGCTGCTGC 59.263 55.000 8.89 8.89 40.20 5.25
1874 2484 1.681166 CCAACTATCCTTGCTGCTGCT 60.681 52.381 17.00 0.00 40.48 4.24
1875 2485 1.400846 CAACTATCCTTGCTGCTGCTG 59.599 52.381 17.00 9.29 40.48 4.41
1876 2486 0.747283 ACTATCCTTGCTGCTGCTGC 60.747 55.000 22.51 22.51 40.48 5.25
1920 2530 1.502231 GTGAGACGCACACACAATCT 58.498 50.000 4.27 0.00 46.91 2.40
1921 2531 1.193203 GTGAGACGCACACACAATCTG 59.807 52.381 4.27 0.00 46.91 2.90
1930 2540 0.596577 CACACAATCTGCTGCTGCTT 59.403 50.000 17.00 0.00 40.48 3.91
1959 2569 0.250124 CCCAGAGTTGGCACGTTACA 60.250 55.000 0.00 0.00 43.58 2.41
2011 2623 9.906660 CTCCTTTAGTCTTACATAGATGATGAC 57.093 37.037 0.00 2.23 39.06 3.06
2029 2641 4.241590 TGACTTGATGATGGTGTTTTGC 57.758 40.909 0.00 0.00 0.00 3.68
2061 2674 1.959226 AAATGGTGTTCGCGTCGCT 60.959 52.632 16.36 0.00 0.00 4.93
2069 2682 3.634702 TTCGCGTCGCTGCATGGTA 62.635 57.895 16.36 0.00 34.15 3.25
2074 2687 1.521681 GTCGCTGCATGGTACTCCC 60.522 63.158 0.00 0.00 0.00 4.30
2078 2691 1.443407 CTGCATGGTACTCCCTCCG 59.557 63.158 0.00 0.00 0.00 4.63
2092 2705 6.248569 ACTCCCTCCGTTCACAAATATAAT 57.751 37.500 0.00 0.00 0.00 1.28
2146 2759 6.455360 ACAGACACAAATGAGTGAACAAAT 57.545 33.333 4.93 0.00 42.05 2.32
2160 2773 9.263538 TGAGTGAACAAATATACTAAAACGTGT 57.736 29.630 0.00 0.00 0.00 4.49
2161 2774 9.737025 GAGTGAACAAATATACTAAAACGTGTC 57.263 33.333 0.00 0.00 0.00 3.67
2162 2775 9.485206 AGTGAACAAATATACTAAAACGTGTCT 57.515 29.630 0.00 0.00 0.00 3.41
2180 2793 9.608617 AACGTGTCTATATACATCTGATTTACG 57.391 33.333 0.00 0.00 0.00 3.18
2181 2794 8.996271 ACGTGTCTATATACATCTGATTTACGA 58.004 33.333 0.00 0.00 0.00 3.43
2182 2795 9.821662 CGTGTCTATATACATCTGATTTACGAA 57.178 33.333 0.00 0.00 0.00 3.85
2193 2806 8.718734 ACATCTGATTTACGAAAAAGTTAGACC 58.281 33.333 0.00 0.00 0.00 3.85
2194 2807 8.717821 CATCTGATTTACGAAAAAGTTAGACCA 58.282 33.333 0.00 0.00 0.00 4.02
2195 2808 8.842358 TCTGATTTACGAAAAAGTTAGACCAT 57.158 30.769 0.00 0.00 0.00 3.55
2196 2809 8.932791 TCTGATTTACGAAAAAGTTAGACCATC 58.067 33.333 0.00 0.00 0.00 3.51
2197 2810 8.842358 TGATTTACGAAAAAGTTAGACCATCT 57.158 30.769 0.00 0.00 0.00 2.90
2198 2811 9.280174 TGATTTACGAAAAAGTTAGACCATCTT 57.720 29.630 0.00 0.00 0.00 2.40
2212 2825 8.979574 GTTAGACCATCTTATATTTCTGAACCG 58.020 37.037 0.00 0.00 0.00 4.44
2213 2826 7.361457 AGACCATCTTATATTTCTGAACCGA 57.639 36.000 0.00 0.00 0.00 4.69
2214 2827 7.437748 AGACCATCTTATATTTCTGAACCGAG 58.562 38.462 0.00 0.00 0.00 4.63
2215 2828 6.525629 ACCATCTTATATTTCTGAACCGAGG 58.474 40.000 0.00 0.00 0.00 4.63
2216 2829 5.934625 CCATCTTATATTTCTGAACCGAGGG 59.065 44.000 0.00 0.00 0.00 4.30
2217 2830 6.239600 CCATCTTATATTTCTGAACCGAGGGA 60.240 42.308 0.00 0.00 0.00 4.20
2218 2831 6.406692 TCTTATATTTCTGAACCGAGGGAG 57.593 41.667 0.00 0.00 0.00 4.30
2219 2832 5.897824 TCTTATATTTCTGAACCGAGGGAGT 59.102 40.000 0.00 0.00 0.00 3.85
2220 2833 7.064866 TCTTATATTTCTGAACCGAGGGAGTA 58.935 38.462 0.00 0.00 0.00 2.59
2221 2834 7.562454 TCTTATATTTCTGAACCGAGGGAGTAA 59.438 37.037 0.00 0.00 0.00 2.24
2222 2835 3.955650 TTTCTGAACCGAGGGAGTAAG 57.044 47.619 0.00 0.00 0.00 2.34
2223 2836 2.893215 TCTGAACCGAGGGAGTAAGA 57.107 50.000 0.00 0.00 0.00 2.10
2224 2837 2.724454 TCTGAACCGAGGGAGTAAGAG 58.276 52.381 0.00 0.00 0.00 2.85
2225 2838 1.751924 CTGAACCGAGGGAGTAAGAGG 59.248 57.143 0.00 0.00 0.00 3.69
2226 2839 1.076677 TGAACCGAGGGAGTAAGAGGT 59.923 52.381 0.00 0.00 0.00 3.85
2227 2840 2.309755 TGAACCGAGGGAGTAAGAGGTA 59.690 50.000 0.00 0.00 0.00 3.08
2228 2841 3.053095 TGAACCGAGGGAGTAAGAGGTAT 60.053 47.826 0.00 0.00 0.00 2.73
2229 2842 3.684408 ACCGAGGGAGTAAGAGGTATT 57.316 47.619 0.00 0.00 0.00 1.89
2230 2843 4.803329 ACCGAGGGAGTAAGAGGTATTA 57.197 45.455 0.00 0.00 0.00 0.98
2231 2844 5.336491 ACCGAGGGAGTAAGAGGTATTAT 57.664 43.478 0.00 0.00 0.00 1.28
2232 2845 5.323581 ACCGAGGGAGTAAGAGGTATTATC 58.676 45.833 0.00 0.00 0.00 1.75
2233 2846 4.395542 CCGAGGGAGTAAGAGGTATTATCG 59.604 50.000 0.00 0.00 0.00 2.92
2234 2847 4.395542 CGAGGGAGTAAGAGGTATTATCGG 59.604 50.000 0.00 0.00 0.00 4.18
2235 2848 5.568392 GAGGGAGTAAGAGGTATTATCGGA 58.432 45.833 0.00 0.00 0.00 4.55
2236 2849 6.155247 AGGGAGTAAGAGGTATTATCGGAT 57.845 41.667 0.00 0.00 0.00 4.18
2237 2850 5.952947 AGGGAGTAAGAGGTATTATCGGATG 59.047 44.000 0.00 0.00 0.00 3.51
2238 2851 5.715753 GGGAGTAAGAGGTATTATCGGATGT 59.284 44.000 0.00 0.00 0.00 3.06
2239 2852 6.210984 GGGAGTAAGAGGTATTATCGGATGTT 59.789 42.308 0.00 0.00 0.00 2.71
2240 2853 7.395489 GGGAGTAAGAGGTATTATCGGATGTTA 59.605 40.741 0.00 0.00 0.00 2.41
2241 2854 8.968969 GGAGTAAGAGGTATTATCGGATGTTAT 58.031 37.037 0.00 0.00 0.00 1.89
2275 2888 5.549742 TTTTTGAAATGGAGGCAACATCT 57.450 34.783 0.00 0.00 41.41 2.90
2276 2889 5.549742 TTTTGAAATGGAGGCAACATCTT 57.450 34.783 0.00 0.00 41.41 2.40
2277 2890 5.549742 TTTGAAATGGAGGCAACATCTTT 57.450 34.783 0.00 0.00 41.41 2.52
2278 2891 4.524316 TGAAATGGAGGCAACATCTTTG 57.476 40.909 0.00 0.00 41.41 2.77
2279 2892 3.256558 GAAATGGAGGCAACATCTTTGC 58.743 45.455 0.17 0.17 44.22 3.68
2280 2893 1.927487 ATGGAGGCAACATCTTTGCA 58.073 45.000 10.90 0.00 46.58 4.08
2281 2894 1.927487 TGGAGGCAACATCTTTGCAT 58.073 45.000 10.90 3.53 46.58 3.96
2285 2898 3.795623 AGGCAACATCTTTGCATCATC 57.204 42.857 10.90 0.00 46.58 2.92
2286 2899 2.429610 AGGCAACATCTTTGCATCATCC 59.570 45.455 10.90 0.00 46.58 3.51
2287 2900 2.166870 GGCAACATCTTTGCATCATCCA 59.833 45.455 10.90 0.00 46.58 3.41
2288 2901 3.181469 GGCAACATCTTTGCATCATCCAT 60.181 43.478 10.90 0.00 46.58 3.41
2289 2902 4.439057 GCAACATCTTTGCATCATCCATT 58.561 39.130 4.12 0.00 44.34 3.16
2290 2903 5.452216 GGCAACATCTTTGCATCATCCATTA 60.452 40.000 10.90 0.00 46.58 1.90
2291 2904 6.044046 GCAACATCTTTGCATCATCCATTAA 58.956 36.000 4.12 0.00 44.34 1.40
2292 2905 6.704493 GCAACATCTTTGCATCATCCATTAAT 59.296 34.615 4.12 0.00 44.34 1.40
2293 2906 7.225931 GCAACATCTTTGCATCATCCATTAATT 59.774 33.333 4.12 0.00 44.34 1.40
2294 2907 9.752961 CAACATCTTTGCATCATCCATTAATTA 57.247 29.630 0.00 0.00 0.00 1.40
2296 2909 9.976511 ACATCTTTGCATCATCCATTAATTAAG 57.023 29.630 3.94 0.00 0.00 1.85
2299 2912 9.631257 TCTTTGCATCATCCATTAATTAAGAGA 57.369 29.630 3.94 3.54 0.00 3.10
2300 2913 9.894783 CTTTGCATCATCCATTAATTAAGAGAG 57.105 33.333 3.94 0.00 0.00 3.20
2301 2914 9.631257 TTTGCATCATCCATTAATTAAGAGAGA 57.369 29.630 3.94 3.90 0.00 3.10
2302 2915 9.631257 TTGCATCATCCATTAATTAAGAGAGAA 57.369 29.630 3.94 0.00 0.00 2.87
2303 2916 9.631257 TGCATCATCCATTAATTAAGAGAGAAA 57.369 29.630 3.94 0.00 0.00 2.52
2320 2933 8.840833 AGAGAGAAATAGAGTGTTTCTTTTCC 57.159 34.615 3.01 0.00 43.80 3.13
2321 2934 8.432805 AGAGAGAAATAGAGTGTTTCTTTTCCA 58.567 33.333 3.01 0.00 43.80 3.53
2322 2935 8.614469 AGAGAAATAGAGTGTTTCTTTTCCAG 57.386 34.615 3.01 0.00 43.80 3.86
2323 2936 8.214364 AGAGAAATAGAGTGTTTCTTTTCCAGT 58.786 33.333 3.01 0.00 43.80 4.00
2324 2937 9.490379 GAGAAATAGAGTGTTTCTTTTCCAGTA 57.510 33.333 3.01 0.00 43.80 2.74
2325 2938 9.274206 AGAAATAGAGTGTTTCTTTTCCAGTAC 57.726 33.333 0.00 0.00 41.75 2.73
2326 2939 7.653767 AATAGAGTGTTTCTTTTCCAGTACG 57.346 36.000 0.00 0.00 37.36 3.67
2327 2940 5.272283 AGAGTGTTTCTTTTCCAGTACGA 57.728 39.130 0.00 0.00 29.61 3.43
2328 2941 5.855045 AGAGTGTTTCTTTTCCAGTACGAT 58.145 37.500 0.00 0.00 29.61 3.73
2329 2942 5.696724 AGAGTGTTTCTTTTCCAGTACGATG 59.303 40.000 0.00 0.00 29.61 3.84
2330 2943 4.755123 AGTGTTTCTTTTCCAGTACGATGG 59.245 41.667 0.00 0.00 42.11 3.51
2331 2944 3.500680 TGTTTCTTTTCCAGTACGATGGC 59.499 43.478 0.00 0.00 40.41 4.40
2332 2945 2.396590 TCTTTTCCAGTACGATGGCC 57.603 50.000 0.00 0.00 40.41 5.36
2333 2946 1.626321 TCTTTTCCAGTACGATGGCCA 59.374 47.619 8.56 8.56 40.41 5.36
2334 2947 2.039216 TCTTTTCCAGTACGATGGCCAA 59.961 45.455 10.96 0.00 40.41 4.52
2335 2948 2.799126 TTTCCAGTACGATGGCCAAT 57.201 45.000 10.96 0.01 40.41 3.16
2336 2949 2.325583 TTCCAGTACGATGGCCAATC 57.674 50.000 10.96 7.35 40.41 2.67
2337 2950 1.199615 TCCAGTACGATGGCCAATCA 58.800 50.000 10.96 0.00 40.41 2.57
2338 2951 1.768275 TCCAGTACGATGGCCAATCAT 59.232 47.619 10.96 0.00 40.41 2.45
2339 2952 2.146342 CCAGTACGATGGCCAATCATC 58.854 52.381 10.96 0.54 39.93 2.92
2340 2953 2.146342 CAGTACGATGGCCAATCATCC 58.854 52.381 10.96 0.00 40.13 3.51
2341 2954 2.050144 AGTACGATGGCCAATCATCCT 58.950 47.619 10.96 0.00 40.13 3.24
2342 2955 2.146342 GTACGATGGCCAATCATCCTG 58.854 52.381 10.96 0.00 40.13 3.86
2343 2956 0.548031 ACGATGGCCAATCATCCTGT 59.452 50.000 10.96 0.00 40.13 4.00
2344 2957 1.233019 CGATGGCCAATCATCCTGTC 58.767 55.000 10.96 0.00 40.13 3.51
2345 2958 1.202734 CGATGGCCAATCATCCTGTCT 60.203 52.381 10.96 0.00 40.13 3.41
2346 2959 2.228059 GATGGCCAATCATCCTGTCTG 58.772 52.381 10.96 0.00 38.00 3.51
2347 2960 0.256752 TGGCCAATCATCCTGTCTGG 59.743 55.000 0.61 0.00 37.10 3.86
2348 2961 2.412605 GCCAATCATCCTGTCTGGC 58.587 57.895 0.00 0.00 45.27 4.85
2349 2962 3.888424 CCAATCATCCTGTCTGGCA 57.112 52.632 0.00 0.00 35.26 4.92
2350 2963 1.386533 CCAATCATCCTGTCTGGCAC 58.613 55.000 0.00 0.00 35.26 5.01
2351 2964 1.012086 CAATCATCCTGTCTGGCACG 58.988 55.000 0.00 0.00 35.26 5.34
2352 2965 0.615331 AATCATCCTGTCTGGCACGT 59.385 50.000 0.00 0.00 35.26 4.49
2353 2966 0.107993 ATCATCCTGTCTGGCACGTG 60.108 55.000 12.28 12.28 35.26 4.49
2354 2967 1.742880 CATCCTGTCTGGCACGTGG 60.743 63.158 18.88 0.08 35.26 4.94
2355 2968 3.612247 ATCCTGTCTGGCACGTGGC 62.612 63.158 33.07 33.07 43.74 5.01
2357 2970 3.349006 CTGTCTGGCACGTGGCAC 61.349 66.667 37.56 28.75 46.12 5.01
2358 2971 4.927782 TGTCTGGCACGTGGCACC 62.928 66.667 37.56 29.18 46.12 5.01
2387 3000 4.293648 CGTGGTGGTGCCGTCAGA 62.294 66.667 0.00 0.00 41.21 3.27
2388 3001 2.665185 GTGGTGGTGCCGTCAGAC 60.665 66.667 0.00 0.00 41.21 3.51
2389 3002 4.293648 TGGTGGTGCCGTCAGACG 62.294 66.667 16.50 16.50 42.11 4.18
2390 3003 3.986006 GGTGGTGCCGTCAGACGA 61.986 66.667 24.88 1.90 46.05 4.20
2391 3004 2.733593 GTGGTGCCGTCAGACGAC 60.734 66.667 24.88 13.95 46.05 4.34
2401 3014 1.337821 GTCAGACGACGACAATGACC 58.662 55.000 0.00 0.00 35.37 4.02
2402 3015 0.242825 TCAGACGACGACAATGACCC 59.757 55.000 0.00 0.00 0.00 4.46
2403 3016 1.071019 CAGACGACGACAATGACCCG 61.071 60.000 0.00 0.00 0.00 5.28
2404 3017 1.210931 GACGACGACAATGACCCGA 59.789 57.895 0.00 0.00 0.00 5.14
2405 3018 0.179145 GACGACGACAATGACCCGAT 60.179 55.000 0.00 0.00 0.00 4.18
2406 3019 0.457853 ACGACGACAATGACCCGATG 60.458 55.000 0.00 0.00 0.00 3.84
2407 3020 1.145759 CGACGACAATGACCCGATGG 61.146 60.000 0.00 0.00 37.80 3.51
2417 3030 4.221422 CCCGATGGTCCGCGACAT 62.221 66.667 8.23 9.36 33.68 3.06
2418 3031 2.658593 CCGATGGTCCGCGACATC 60.659 66.667 20.86 20.86 33.68 3.06
2419 3032 2.104132 CGATGGTCCGCGACATCA 59.896 61.111 26.20 14.07 33.68 3.07
2420 3033 1.518352 CGATGGTCCGCGACATCAA 60.518 57.895 26.20 4.81 33.68 2.57
2421 3034 1.752501 CGATGGTCCGCGACATCAAC 61.753 60.000 26.20 11.83 33.68 3.18
2422 3035 1.429148 GATGGTCCGCGACATCAACC 61.429 60.000 23.83 14.87 33.68 3.77
2423 3036 2.047655 GGTCCGCGACATCAACCA 60.048 61.111 8.23 0.00 33.68 3.67
2424 3037 1.669760 GGTCCGCGACATCAACCAA 60.670 57.895 8.23 0.00 33.68 3.67
2425 3038 1.024579 GGTCCGCGACATCAACCAAT 61.025 55.000 8.23 0.00 33.68 3.16
2426 3039 0.096976 GTCCGCGACATCAACCAATG 59.903 55.000 8.23 0.00 32.09 2.82
2427 3040 1.226379 CCGCGACATCAACCAATGC 60.226 57.895 8.23 0.00 0.00 3.56
2428 3041 1.647545 CCGCGACATCAACCAATGCT 61.648 55.000 8.23 0.00 0.00 3.79
2429 3042 0.247814 CGCGACATCAACCAATGCTC 60.248 55.000 0.00 0.00 0.00 4.26
2430 3043 0.099436 GCGACATCAACCAATGCTCC 59.901 55.000 0.00 0.00 0.00 4.70
2431 3044 0.734889 CGACATCAACCAATGCTCCC 59.265 55.000 0.00 0.00 0.00 4.30
2432 3045 1.679944 CGACATCAACCAATGCTCCCT 60.680 52.381 0.00 0.00 0.00 4.20
2433 3046 2.019984 GACATCAACCAATGCTCCCTC 58.980 52.381 0.00 0.00 0.00 4.30
2434 3047 1.019673 CATCAACCAATGCTCCCTCG 58.980 55.000 0.00 0.00 0.00 4.63
2435 3048 0.107017 ATCAACCAATGCTCCCTCGG 60.107 55.000 0.00 0.00 0.00 4.63
2436 3049 2.044946 AACCAATGCTCCCTCGGC 60.045 61.111 0.00 0.00 0.00 5.54
2437 3050 2.905996 AACCAATGCTCCCTCGGCA 61.906 57.895 0.00 0.00 44.05 5.69
2441 3054 3.323622 ATGCTCCCTCGGCATGAA 58.676 55.556 0.00 0.00 46.85 2.57
2442 3055 1.147824 ATGCTCCCTCGGCATGAAG 59.852 57.895 0.00 0.00 46.85 3.02
2443 3056 2.203126 GCTCCCTCGGCATGAAGG 60.203 66.667 0.00 0.00 0.00 3.46
2444 3057 2.735772 GCTCCCTCGGCATGAAGGA 61.736 63.158 10.00 1.25 34.70 3.36
2445 3058 1.445095 CTCCCTCGGCATGAAGGAG 59.555 63.158 8.08 8.08 46.34 3.69
2446 3059 1.306141 TCCCTCGGCATGAAGGAGT 60.306 57.895 10.00 0.00 31.99 3.85
2447 3060 0.909610 TCCCTCGGCATGAAGGAGTT 60.910 55.000 10.00 0.00 31.99 3.01
2448 3061 0.745845 CCCTCGGCATGAAGGAGTTG 60.746 60.000 10.00 0.00 28.56 3.16
2449 3062 0.745845 CCTCGGCATGAAGGAGTTGG 60.746 60.000 0.00 0.00 0.00 3.77
2450 3063 0.250234 CTCGGCATGAAGGAGTTGGA 59.750 55.000 0.00 0.00 0.00 3.53
2451 3064 0.911769 TCGGCATGAAGGAGTTGGAT 59.088 50.000 0.00 0.00 0.00 3.41
2452 3065 1.019673 CGGCATGAAGGAGTTGGATG 58.980 55.000 0.00 0.00 0.00 3.51
2453 3066 1.679944 CGGCATGAAGGAGTTGGATGT 60.680 52.381 0.00 0.00 0.00 3.06
2454 3067 1.747355 GGCATGAAGGAGTTGGATGTG 59.253 52.381 0.00 0.00 0.00 3.21
2455 3068 1.747355 GCATGAAGGAGTTGGATGTGG 59.253 52.381 0.00 0.00 0.00 4.17
2456 3069 2.372264 CATGAAGGAGTTGGATGTGGG 58.628 52.381 0.00 0.00 0.00 4.61
2457 3070 0.038166 TGAAGGAGTTGGATGTGGGC 59.962 55.000 0.00 0.00 0.00 5.36
2458 3071 0.681243 GAAGGAGTTGGATGTGGGCC 60.681 60.000 0.00 0.00 0.00 5.80
2459 3072 2.043953 GGAGTTGGATGTGGGCCC 60.044 66.667 17.59 17.59 0.00 5.80
2460 3073 2.043953 GAGTTGGATGTGGGCCCC 60.044 66.667 22.27 11.72 0.00 5.80
2461 3074 3.662117 GAGTTGGATGTGGGCCCCC 62.662 68.421 22.27 14.24 0.00 5.40
2482 3095 2.857592 GCATCGGATCAATGCAAAGT 57.142 45.000 21.16 0.00 46.93 2.66
2483 3096 3.155093 GCATCGGATCAATGCAAAGTT 57.845 42.857 21.16 0.00 46.93 2.66
2484 3097 3.111098 GCATCGGATCAATGCAAAGTTC 58.889 45.455 21.16 0.00 46.93 3.01
2485 3098 3.699067 CATCGGATCAATGCAAAGTTCC 58.301 45.455 0.00 0.00 0.00 3.62
2486 3099 3.071874 TCGGATCAATGCAAAGTTCCT 57.928 42.857 13.70 0.00 0.00 3.36
2487 3100 2.749076 TCGGATCAATGCAAAGTTCCTG 59.251 45.455 13.70 9.23 0.00 3.86
2488 3101 2.159338 CGGATCAATGCAAAGTTCCTGG 60.159 50.000 13.70 0.00 0.00 4.45
2489 3102 2.417787 GGATCAATGCAAAGTTCCTGGC 60.418 50.000 10.17 0.00 0.00 4.85
2490 3103 1.702182 TCAATGCAAAGTTCCTGGCA 58.298 45.000 0.00 0.00 41.00 4.92
2492 3105 3.429492 TCAATGCAAAGTTCCTGGCATA 58.571 40.909 0.00 0.00 45.52 3.14
2493 3106 3.444742 TCAATGCAAAGTTCCTGGCATAG 59.555 43.478 0.00 0.00 45.52 2.23
2494 3107 2.381911 ATGCAAAGTTCCTGGCATAGG 58.618 47.619 0.00 0.00 44.52 2.57
2495 3108 0.457443 GCAAAGTTCCTGGCATAGGC 59.543 55.000 0.00 0.00 46.87 3.93
2496 3109 1.838112 CAAAGTTCCTGGCATAGGCA 58.162 50.000 0.15 0.00 46.87 4.75
2497 3110 2.381911 CAAAGTTCCTGGCATAGGCAT 58.618 47.619 0.15 0.00 46.87 4.40
2498 3111 2.355010 AAGTTCCTGGCATAGGCATC 57.645 50.000 0.15 0.00 46.87 3.91
2499 3112 0.107456 AGTTCCTGGCATAGGCATCG 59.893 55.000 0.15 0.00 46.87 3.84
2500 3113 0.106708 GTTCCTGGCATAGGCATCGA 59.893 55.000 0.15 0.00 46.87 3.59
2501 3114 0.836606 TTCCTGGCATAGGCATCGAA 59.163 50.000 0.15 0.00 46.87 3.71
2502 3115 0.394192 TCCTGGCATAGGCATCGAAG 59.606 55.000 0.15 0.00 46.87 3.79
2503 3116 0.107456 CCTGGCATAGGCATCGAAGT 59.893 55.000 0.15 0.00 43.71 3.01
2504 3117 1.475751 CCTGGCATAGGCATCGAAGTT 60.476 52.381 0.15 0.00 43.71 2.66
2505 3118 2.292267 CTGGCATAGGCATCGAAGTTT 58.708 47.619 0.15 0.00 43.71 2.66
2506 3119 2.288666 TGGCATAGGCATCGAAGTTTC 58.711 47.619 0.15 0.00 43.71 2.78
2507 3120 1.261619 GGCATAGGCATCGAAGTTTCG 59.738 52.381 7.91 7.91 46.67 3.46
2508 3121 1.333258 GCATAGGCATCGAAGTTTCGC 60.333 52.381 9.28 0.00 44.36 4.70
2509 3122 3.876706 GCATAGGCATCGAAGTTTCGCA 61.877 50.000 9.28 0.04 44.36 5.10
2510 3123 5.888620 GCATAGGCATCGAAGTTTCGCAC 62.889 52.174 9.28 1.79 44.36 5.34
2526 3139 2.568696 GCACTGCGATGTAGAGAAGA 57.431 50.000 0.00 0.00 0.00 2.87
2527 3140 2.881074 GCACTGCGATGTAGAGAAGAA 58.119 47.619 0.00 0.00 0.00 2.52
2528 3141 2.857152 GCACTGCGATGTAGAGAAGAAG 59.143 50.000 0.00 0.00 0.00 2.85
2529 3142 3.443037 CACTGCGATGTAGAGAAGAAGG 58.557 50.000 0.00 0.00 0.00 3.46
2530 3143 2.159170 ACTGCGATGTAGAGAAGAAGGC 60.159 50.000 0.00 0.00 0.00 4.35
2531 3144 1.137086 TGCGATGTAGAGAAGAAGGCC 59.863 52.381 0.00 0.00 0.00 5.19
2532 3145 1.866063 GCGATGTAGAGAAGAAGGCCG 60.866 57.143 0.00 0.00 0.00 6.13
2533 3146 1.676529 CGATGTAGAGAAGAAGGCCGA 59.323 52.381 0.00 0.00 0.00 5.54
2534 3147 2.287308 CGATGTAGAGAAGAAGGCCGAG 60.287 54.545 0.00 0.00 0.00 4.63
2535 3148 1.475403 TGTAGAGAAGAAGGCCGAGG 58.525 55.000 0.00 0.00 0.00 4.63
2536 3149 1.005569 TGTAGAGAAGAAGGCCGAGGA 59.994 52.381 0.00 0.00 0.00 3.71
2537 3150 1.406180 GTAGAGAAGAAGGCCGAGGAC 59.594 57.143 0.00 0.00 0.00 3.85
2538 3151 0.973496 AGAGAAGAAGGCCGAGGACC 60.973 60.000 0.00 0.00 0.00 4.46
2539 3152 1.229209 AGAAGAAGGCCGAGGACCA 60.229 57.895 0.00 0.00 0.00 4.02
2540 3153 0.836400 AGAAGAAGGCCGAGGACCAA 60.836 55.000 0.00 0.00 0.00 3.67
2541 3154 0.391793 GAAGAAGGCCGAGGACCAAG 60.392 60.000 0.00 0.00 0.00 3.61
2542 3155 2.436824 GAAGGCCGAGGACCAAGC 60.437 66.667 0.00 0.00 0.00 4.01
2543 3156 3.978571 GAAGGCCGAGGACCAAGCC 62.979 68.421 10.64 10.64 46.13 4.35
2547 3160 4.760047 CCGAGGACCAAGCCCGTG 62.760 72.222 0.00 0.00 0.00 4.94
2562 3175 4.994201 GTGCTCGTGTCGTCGCCA 62.994 66.667 0.00 0.00 0.00 5.69
2563 3176 4.273257 TGCTCGTGTCGTCGCCAA 62.273 61.111 0.00 0.00 0.00 4.52
2564 3177 3.470567 GCTCGTGTCGTCGCCAAG 61.471 66.667 0.00 0.00 0.00 3.61
2565 3178 2.805353 CTCGTGTCGTCGCCAAGG 60.805 66.667 0.00 0.00 0.00 3.61
2566 3179 3.263503 CTCGTGTCGTCGCCAAGGA 62.264 63.158 0.00 0.00 0.00 3.36
2567 3180 2.805353 CGTGTCGTCGCCAAGGAG 60.805 66.667 0.00 0.00 0.00 3.69
2568 3181 3.112709 GTGTCGTCGCCAAGGAGC 61.113 66.667 0.00 0.00 0.00 4.70
2569 3182 3.611674 TGTCGTCGCCAAGGAGCA 61.612 61.111 0.00 0.00 0.00 4.26
2570 3183 2.357034 GTCGTCGCCAAGGAGCAA 60.357 61.111 0.00 0.00 0.00 3.91
2571 3184 2.048222 TCGTCGCCAAGGAGCAAG 60.048 61.111 0.00 0.00 0.00 4.01
2572 3185 3.793144 CGTCGCCAAGGAGCAAGC 61.793 66.667 0.00 0.00 0.00 4.01
2573 3186 3.435186 GTCGCCAAGGAGCAAGCC 61.435 66.667 0.00 0.00 0.00 4.35
2574 3187 4.722700 TCGCCAAGGAGCAAGCCC 62.723 66.667 0.00 0.00 0.00 5.19
2576 3189 2.363406 GCCAAGGAGCAAGCCCAT 60.363 61.111 0.00 0.00 0.00 4.00
2577 3190 1.986210 GCCAAGGAGCAAGCCCATT 60.986 57.895 0.00 0.00 0.00 3.16
2578 3191 1.953231 GCCAAGGAGCAAGCCCATTC 61.953 60.000 0.00 0.00 0.00 2.67
2579 3192 1.325476 CCAAGGAGCAAGCCCATTCC 61.325 60.000 0.00 0.00 0.00 3.01
2580 3193 1.379044 AAGGAGCAAGCCCATTCCG 60.379 57.895 0.00 0.00 34.87 4.30
2581 3194 2.044946 GGAGCAAGCCCATTCCGT 60.045 61.111 0.00 0.00 0.00 4.69
2582 3195 1.678970 GGAGCAAGCCCATTCCGTT 60.679 57.895 0.00 0.00 0.00 4.44
2583 3196 1.657751 GGAGCAAGCCCATTCCGTTC 61.658 60.000 0.00 0.00 0.00 3.95
2584 3197 0.960364 GAGCAAGCCCATTCCGTTCA 60.960 55.000 0.00 0.00 0.00 3.18
2585 3198 0.962356 AGCAAGCCCATTCCGTTCAG 60.962 55.000 0.00 0.00 0.00 3.02
2586 3199 1.244019 GCAAGCCCATTCCGTTCAGT 61.244 55.000 0.00 0.00 0.00 3.41
2587 3200 0.804989 CAAGCCCATTCCGTTCAGTC 59.195 55.000 0.00 0.00 0.00 3.51
2588 3201 0.322546 AAGCCCATTCCGTTCAGTCC 60.323 55.000 0.00 0.00 0.00 3.85
2589 3202 1.749258 GCCCATTCCGTTCAGTCCC 60.749 63.158 0.00 0.00 0.00 4.46
2590 3203 1.991230 CCCATTCCGTTCAGTCCCT 59.009 57.895 0.00 0.00 0.00 4.20
2591 3204 0.107654 CCCATTCCGTTCAGTCCCTC 60.108 60.000 0.00 0.00 0.00 4.30
2592 3205 0.460284 CCATTCCGTTCAGTCCCTCG 60.460 60.000 0.00 0.00 0.00 4.63
2593 3206 1.084370 CATTCCGTTCAGTCCCTCGC 61.084 60.000 0.00 0.00 0.00 5.03
2594 3207 2.240162 ATTCCGTTCAGTCCCTCGCC 62.240 60.000 0.00 0.00 0.00 5.54
2595 3208 4.796231 CCGTTCAGTCCCTCGCCG 62.796 72.222 0.00 0.00 0.00 6.46
2596 3209 4.796231 CGTTCAGTCCCTCGCCGG 62.796 72.222 0.00 0.00 0.00 6.13
2603 3216 4.853142 TCCCTCGCCGGCCTACAT 62.853 66.667 23.46 0.00 0.00 2.29
2604 3217 4.609018 CCCTCGCCGGCCTACATG 62.609 72.222 23.46 5.48 0.00 3.21
2605 3218 3.536917 CCTCGCCGGCCTACATGA 61.537 66.667 23.46 10.30 0.00 3.07
2606 3219 2.279517 CTCGCCGGCCTACATGAC 60.280 66.667 23.46 0.00 0.00 3.06
2607 3220 2.758327 TCGCCGGCCTACATGACT 60.758 61.111 23.46 0.00 0.00 3.41
2608 3221 2.186903 CGCCGGCCTACATGACTT 59.813 61.111 23.46 0.00 0.00 3.01
2609 3222 2.173669 CGCCGGCCTACATGACTTG 61.174 63.158 23.46 0.00 0.00 3.16
2610 3223 1.819632 GCCGGCCTACATGACTTGG 60.820 63.158 18.11 0.00 0.00 3.61
2611 3224 1.904771 CCGGCCTACATGACTTGGA 59.095 57.895 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 6.313519 ACTAATCAACTGCCTTATTCCTCA 57.686 37.500 0.00 0.00 0.00 3.86
19 20 4.530553 TCTGTGGACTAATCAACTGCCTTA 59.469 41.667 0.00 0.00 29.75 2.69
23 24 4.193826 TCTCTGTGGACTAATCAACTGC 57.806 45.455 0.00 0.00 29.75 4.40
24 25 5.970592 TGATCTCTGTGGACTAATCAACTG 58.029 41.667 0.00 0.00 28.99 3.16
26 27 6.481644 GGAATGATCTCTGTGGACTAATCAAC 59.518 42.308 0.00 0.00 0.00 3.18
70 128 0.105246 TGCCTTGAACCCCAACCAAT 60.105 50.000 0.00 0.00 0.00 3.16
98 156 4.338879 CCATGAAACATTCTCTCCTTGGT 58.661 43.478 0.00 0.00 0.00 3.67
132 190 6.312426 TGCAACGATTTGGCAATATTAAAAGG 59.688 34.615 0.00 0.00 32.81 3.11
145 203 2.050691 CGAAAAGGTGCAACGATTTGG 58.949 47.619 12.42 8.16 38.12 3.28
185 243 6.440647 AGACCAAGGATGTCAATGAAGTAGTA 59.559 38.462 0.00 0.00 35.15 1.82
187 245 5.738909 AGACCAAGGATGTCAATGAAGTAG 58.261 41.667 0.00 0.00 35.15 2.57
223 281 8.440059 GTCGTTCACATGTACTTTAATCATCAA 58.560 33.333 0.00 0.00 0.00 2.57
224 282 7.064134 GGTCGTTCACATGTACTTTAATCATCA 59.936 37.037 0.00 0.00 0.00 3.07
236 294 1.822990 GAGAGGGGTCGTTCACATGTA 59.177 52.381 0.00 0.00 0.00 2.29
253 311 0.188342 AAAAGGGCCCAAGCAAGAGA 59.812 50.000 27.56 0.00 42.56 3.10
254 312 0.605083 GAAAAGGGCCCAAGCAAGAG 59.395 55.000 27.56 0.00 42.56 2.85
255 313 0.831711 GGAAAAGGGCCCAAGCAAGA 60.832 55.000 27.56 0.00 42.56 3.02
256 314 1.673477 GGAAAAGGGCCCAAGCAAG 59.327 57.895 27.56 0.00 42.56 4.01
257 315 1.841103 GGGAAAAGGGCCCAAGCAA 60.841 57.895 27.56 0.00 45.31 3.91
263 321 0.766674 AAAACAGGGGAAAAGGGCCC 60.767 55.000 16.46 16.46 45.25 5.80
265 323 1.071699 GGAAAAACAGGGGAAAAGGGC 59.928 52.381 0.00 0.00 0.00 5.19
285 344 7.490868 CGTATGTAATGTATACGCTGTTCAAG 58.509 38.462 4.85 0.00 44.37 3.02
296 355 5.794726 ACCACCTGCGTATGTAATGTATA 57.205 39.130 0.00 0.00 0.00 1.47
300 359 2.354510 CCAACCACCTGCGTATGTAATG 59.645 50.000 0.00 0.00 0.00 1.90
301 360 2.639065 CCAACCACCTGCGTATGTAAT 58.361 47.619 0.00 0.00 0.00 1.89
302 361 1.339247 CCCAACCACCTGCGTATGTAA 60.339 52.381 0.00 0.00 0.00 2.41
303 362 0.250793 CCCAACCACCTGCGTATGTA 59.749 55.000 0.00 0.00 0.00 2.29
304 363 1.002624 CCCAACCACCTGCGTATGT 60.003 57.895 0.00 0.00 0.00 2.29
305 364 0.608035 AACCCAACCACCTGCGTATG 60.608 55.000 0.00 0.00 0.00 2.39
309 368 3.294493 CCAACCCAACCACCTGCG 61.294 66.667 0.00 0.00 0.00 5.18
327 386 1.621072 CCCCTCTACTGCTCCAAGTCT 60.621 57.143 0.00 0.00 0.00 3.24
328 387 0.827368 CCCCTCTACTGCTCCAAGTC 59.173 60.000 0.00 0.00 0.00 3.01
329 388 1.268283 GCCCCTCTACTGCTCCAAGT 61.268 60.000 0.00 0.00 0.00 3.16
330 389 1.524482 GCCCCTCTACTGCTCCAAG 59.476 63.158 0.00 0.00 0.00 3.61
331 390 1.995626 GGCCCCTCTACTGCTCCAA 60.996 63.158 0.00 0.00 0.00 3.53
332 391 2.365635 GGCCCCTCTACTGCTCCA 60.366 66.667 0.00 0.00 0.00 3.86
333 392 2.365635 TGGCCCCTCTACTGCTCC 60.366 66.667 0.00 0.00 0.00 4.70
334 393 1.681486 GAGTGGCCCCTCTACTGCTC 61.681 65.000 8.15 0.00 36.57 4.26
335 394 1.687493 GAGTGGCCCCTCTACTGCT 60.687 63.158 8.15 0.00 36.57 4.24
336 395 2.904131 GAGTGGCCCCTCTACTGC 59.096 66.667 8.15 0.00 36.57 4.40
337 396 1.258445 AACGAGTGGCCCCTCTACTG 61.258 60.000 13.72 0.00 36.57 2.74
338 397 0.333993 TAACGAGTGGCCCCTCTACT 59.666 55.000 13.72 2.67 39.39 2.57
339 398 0.745468 CTAACGAGTGGCCCCTCTAC 59.255 60.000 13.72 0.00 0.00 2.59
340 399 1.041447 GCTAACGAGTGGCCCCTCTA 61.041 60.000 13.72 0.00 0.00 2.43
341 400 2.359967 GCTAACGAGTGGCCCCTCT 61.360 63.158 13.72 2.70 0.00 3.69
342 401 2.187163 GCTAACGAGTGGCCCCTC 59.813 66.667 4.94 4.94 0.00 4.30
343 402 3.400054 GGCTAACGAGTGGCCCCT 61.400 66.667 0.00 0.00 39.96 4.79
344 403 3.387225 GAGGCTAACGAGTGGCCCC 62.387 68.421 13.04 0.00 46.31 5.80
345 404 2.187163 GAGGCTAACGAGTGGCCC 59.813 66.667 13.04 0.00 46.31 5.80
346 405 1.448013 GTGAGGCTAACGAGTGGCC 60.448 63.158 9.59 9.59 45.57 5.36
347 406 1.448013 GGTGAGGCTAACGAGTGGC 60.448 63.158 0.00 0.00 0.00 5.01
363 422 7.654287 ATCTGATAATAGGGAGGATTTTGGT 57.346 36.000 0.00 0.00 0.00 3.67
373 432 4.660303 ACACCAGCAATCTGATAATAGGGA 59.340 41.667 0.00 0.00 42.95 4.20
374 433 4.978099 ACACCAGCAATCTGATAATAGGG 58.022 43.478 0.00 0.00 42.95 3.53
377 436 9.494271 GAAATCTACACCAGCAATCTGATAATA 57.506 33.333 0.00 0.00 42.95 0.98
385 444 6.317140 TCTGAATGAAATCTACACCAGCAATC 59.683 38.462 0.00 0.00 0.00 2.67
407 466 4.757799 ACCTCGATCGTTATCTCATCTG 57.242 45.455 15.94 0.00 0.00 2.90
408 467 4.557695 GCAACCTCGATCGTTATCTCATCT 60.558 45.833 15.94 0.00 0.00 2.90
417 476 1.878953 AAAGTGCAACCTCGATCGTT 58.121 45.000 15.94 0.00 37.80 3.85
419 478 1.798223 TGAAAAGTGCAACCTCGATCG 59.202 47.619 9.36 9.36 37.80 3.69
423 482 4.610945 AGAAAATGAAAAGTGCAACCTCG 58.389 39.130 0.00 0.00 37.80 4.63
427 486 5.463392 GGGAAGAGAAAATGAAAAGTGCAAC 59.537 40.000 0.00 0.00 0.00 4.17
429 488 4.261572 CGGGAAGAGAAAATGAAAAGTGCA 60.262 41.667 0.00 0.00 0.00 4.57
432 491 4.519350 GGACGGGAAGAGAAAATGAAAAGT 59.481 41.667 0.00 0.00 0.00 2.66
438 497 5.023533 TCTATGGACGGGAAGAGAAAATG 57.976 43.478 0.00 0.00 0.00 2.32
439 498 5.896073 ATCTATGGACGGGAAGAGAAAAT 57.104 39.130 0.00 0.00 0.00 1.82
440 499 5.693769 AATCTATGGACGGGAAGAGAAAA 57.306 39.130 0.00 0.00 0.00 2.29
444 503 5.525378 CAGAAAAATCTATGGACGGGAAGAG 59.475 44.000 0.00 0.00 0.00 2.85
447 506 5.429681 TCAGAAAAATCTATGGACGGGAA 57.570 39.130 0.00 0.00 0.00 3.97
448 507 5.429681 TTCAGAAAAATCTATGGACGGGA 57.570 39.130 0.00 0.00 0.00 5.14
449 508 6.699575 AATTCAGAAAAATCTATGGACGGG 57.300 37.500 0.00 0.00 0.00 5.28
450 509 9.884465 GAATAATTCAGAAAAATCTATGGACGG 57.116 33.333 0.00 0.00 0.00 4.79
487 592 2.741985 TGGACTTGTCATGCCGCG 60.742 61.111 0.00 0.00 0.00 6.46
488 593 1.375908 TCTGGACTTGTCATGCCGC 60.376 57.895 3.08 0.00 0.00 6.53
489 594 0.036952 AGTCTGGACTTGTCATGCCG 60.037 55.000 3.08 0.00 38.83 5.69
490 595 3.334583 TTAGTCTGGACTTGTCATGCC 57.665 47.619 8.60 0.00 42.54 4.40
492 597 5.174395 CCTCTTTAGTCTGGACTTGTCATG 58.826 45.833 8.60 0.00 42.54 3.07
493 598 4.323104 GCCTCTTTAGTCTGGACTTGTCAT 60.323 45.833 8.60 0.00 42.54 3.06
494 599 3.006967 GCCTCTTTAGTCTGGACTTGTCA 59.993 47.826 8.60 0.00 42.54 3.58
495 600 3.591023 GCCTCTTTAGTCTGGACTTGTC 58.409 50.000 8.60 0.00 42.54 3.18
496 601 2.303311 GGCCTCTTTAGTCTGGACTTGT 59.697 50.000 8.60 0.00 42.54 3.16
497 602 2.303022 TGGCCTCTTTAGTCTGGACTTG 59.697 50.000 3.32 1.18 42.54 3.16
498 603 2.621070 TGGCCTCTTTAGTCTGGACTT 58.379 47.619 3.32 0.00 42.54 3.01
499 604 2.327325 TGGCCTCTTTAGTCTGGACT 57.673 50.000 3.32 8.36 45.02 3.85
500 605 3.418684 TTTGGCCTCTTTAGTCTGGAC 57.581 47.619 3.32 0.00 0.00 4.02
502 607 2.489722 GCTTTTGGCCTCTTTAGTCTGG 59.510 50.000 3.32 0.00 34.27 3.86
503 608 3.149196 TGCTTTTGGCCTCTTTAGTCTG 58.851 45.455 3.32 0.00 40.92 3.51
505 610 3.758554 TCATGCTTTTGGCCTCTTTAGTC 59.241 43.478 3.32 0.00 40.92 2.59
506 611 3.507622 GTCATGCTTTTGGCCTCTTTAGT 59.492 43.478 3.32 0.00 40.92 2.24
507 612 3.507233 TGTCATGCTTTTGGCCTCTTTAG 59.493 43.478 3.32 0.00 40.92 1.85
508 613 3.255642 GTGTCATGCTTTTGGCCTCTTTA 59.744 43.478 3.32 0.00 40.92 1.85
509 614 2.036346 GTGTCATGCTTTTGGCCTCTTT 59.964 45.455 3.32 0.00 40.92 2.52
512 617 0.109597 CGTGTCATGCTTTTGGCCTC 60.110 55.000 3.32 0.00 40.92 4.70
513 618 0.537143 TCGTGTCATGCTTTTGGCCT 60.537 50.000 3.32 0.00 40.92 5.19
536 833 5.984926 CACAGAGATATCTCCTTTGCTCTTC 59.015 44.000 25.88 1.03 43.88 2.87
537 834 5.424895 ACACAGAGATATCTCCTTTGCTCTT 59.575 40.000 25.88 4.51 43.88 2.85
541 838 3.559242 GCACACAGAGATATCTCCTTTGC 59.441 47.826 25.88 23.15 43.88 3.68
542 839 4.809958 CAGCACACAGAGATATCTCCTTTG 59.190 45.833 25.88 21.39 43.88 2.77
544 841 3.181467 GCAGCACACAGAGATATCTCCTT 60.181 47.826 25.88 12.60 43.88 3.36
551 848 1.832998 TGGATGCAGCACACAGAGATA 59.167 47.619 3.51 0.00 0.00 1.98
607 915 2.573340 CAAAAGGGTCGGGCATGC 59.427 61.111 9.90 9.90 0.00 4.06
609 917 0.611896 CTTCCAAAAGGGTCGGGCAT 60.612 55.000 0.00 0.00 38.11 4.40
610 918 1.228429 CTTCCAAAAGGGTCGGGCA 60.228 57.895 0.00 0.00 38.11 5.36
611 919 3.681473 CTTCCAAAAGGGTCGGGC 58.319 61.111 0.00 0.00 38.11 6.13
625 935 6.088085 CACATCAGTTGCGTTAAAATTCCTTC 59.912 38.462 0.00 0.00 0.00 3.46
666 976 2.595463 GTTGCTGCCTGCTGGTGA 60.595 61.111 11.69 0.00 43.37 4.02
736 1051 3.306364 GGTATCGTGGAGATCAATCAGGG 60.306 52.174 0.00 0.00 40.66 4.45
752 1075 5.007332 GGTTAGTTTTGGTAGCATGGTATCG 59.993 44.000 8.06 0.00 0.00 2.92
802 1129 3.091545 AGAGACAGAAAGCAGAGAGAGG 58.908 50.000 0.00 0.00 0.00 3.69
806 1135 4.009675 GAGAGAGAGACAGAAAGCAGAGA 58.990 47.826 0.00 0.00 0.00 3.10
815 1144 4.614475 AGAGAGAGAGAGAGAGAGACAGA 58.386 47.826 0.00 0.00 0.00 3.41
822 1151 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
828 1215 3.912496 TGGTGAGAGAGAGAGAGAGAG 57.088 52.381 0.00 0.00 0.00 3.20
832 1222 3.430453 AGGTTTGGTGAGAGAGAGAGAG 58.570 50.000 0.00 0.00 0.00 3.20
858 1248 0.611896 CGGGGAACAAGGGAAAGCAT 60.612 55.000 0.00 0.00 0.00 3.79
883 1283 3.917870 CGGCGTGTCTTATAGGCG 58.082 61.111 0.00 0.00 45.35 5.52
918 1318 5.651576 GGAGGAGAAAGAAAGATGCAGAATT 59.348 40.000 0.00 0.00 0.00 2.17
976 1396 0.883814 GCCGGAGCTGGAGATTGATG 60.884 60.000 5.05 0.00 35.50 3.07
1112 1553 2.644992 GGTTGTCGGCCTGCTTTG 59.355 61.111 0.00 0.00 0.00 2.77
1175 1616 4.948621 GCTCAGAGACTAGTTACTTACCCA 59.051 45.833 0.00 0.00 0.00 4.51
1246 1701 1.745087 CCGATTGGTTGCTGCTGTTAT 59.255 47.619 0.00 0.00 0.00 1.89
1413 1899 2.435586 TCCTCGTCGTCGTCCTCC 60.436 66.667 1.33 0.00 38.33 4.30
1414 1900 3.091529 CTCCTCGTCGTCGTCCTC 58.908 66.667 1.33 0.00 38.33 3.71
1415 1901 3.126225 GCTCCTCGTCGTCGTCCT 61.126 66.667 1.33 0.00 38.33 3.85
1425 1911 2.902846 ACGATCTCCCGCTCCTCG 60.903 66.667 0.00 0.00 38.08 4.63
1597 2098 3.179925 TGGATCAGTTGATGCAGGC 57.820 52.632 11.61 0.00 45.80 4.85
1640 2141 8.717717 AGAGTGAGGTGGATTATGAATTTATGA 58.282 33.333 0.00 0.00 0.00 2.15
1641 2142 8.781196 CAGAGTGAGGTGGATTATGAATTTATG 58.219 37.037 0.00 0.00 0.00 1.90
1642 2143 7.446625 GCAGAGTGAGGTGGATTATGAATTTAT 59.553 37.037 0.00 0.00 0.00 1.40
1643 2144 6.767902 GCAGAGTGAGGTGGATTATGAATTTA 59.232 38.462 0.00 0.00 0.00 1.40
1644 2145 5.591877 GCAGAGTGAGGTGGATTATGAATTT 59.408 40.000 0.00 0.00 0.00 1.82
1645 2146 5.104193 AGCAGAGTGAGGTGGATTATGAATT 60.104 40.000 0.00 0.00 0.00 2.17
1646 2147 4.411540 AGCAGAGTGAGGTGGATTATGAAT 59.588 41.667 0.00 0.00 0.00 2.57
1647 2148 3.776969 AGCAGAGTGAGGTGGATTATGAA 59.223 43.478 0.00 0.00 0.00 2.57
1687 2203 2.610727 GCTACACAGTCTTGGACCTCAC 60.611 54.545 0.00 0.00 32.18 3.51
1769 2361 2.776670 CTTCTCGAGGCAGTGCAGCA 62.777 60.000 18.61 0.00 35.83 4.41
1770 2362 2.047844 TTCTCGAGGCAGTGCAGC 60.048 61.111 18.61 6.92 0.00 5.25
1772 2364 0.037882 CTTCTTCTCGAGGCAGTGCA 60.038 55.000 18.61 0.00 0.00 4.57
1774 2366 1.815613 TCTCTTCTTCTCGAGGCAGTG 59.184 52.381 13.56 4.95 0.00 3.66
1777 2369 7.531857 AATATATTCTCTTCTTCTCGAGGCA 57.468 36.000 13.56 0.00 0.00 4.75
1778 2370 6.745450 CGAATATATTCTCTTCTTCTCGAGGC 59.255 42.308 20.47 0.00 34.69 4.70
1779 2371 7.748683 CACGAATATATTCTCTTCTTCTCGAGG 59.251 40.741 20.47 0.00 34.69 4.63
1780 2372 8.286800 ACACGAATATATTCTCTTCTTCTCGAG 58.713 37.037 20.47 5.93 34.69 4.04
1781 2373 8.155821 ACACGAATATATTCTCTTCTTCTCGA 57.844 34.615 20.47 0.00 34.69 4.04
1857 2467 0.747283 GCAGCAGCAGCAAGGATAGT 60.747 55.000 4.63 0.00 45.49 2.12
1886 2496 3.865745 CGTCTCACCAACCAGATCATAAC 59.134 47.826 0.00 0.00 0.00 1.89
1919 2529 1.236628 ACAAGAAGAAGCAGCAGCAG 58.763 50.000 3.17 0.00 45.49 4.24
1920 2530 1.605710 GAACAAGAAGAAGCAGCAGCA 59.394 47.619 3.17 0.00 45.49 4.41
1921 2531 1.068679 GGAACAAGAAGAAGCAGCAGC 60.069 52.381 0.00 0.00 42.56 5.25
1930 2540 2.487265 GCCAACTCTGGGAACAAGAAGA 60.487 50.000 0.00 0.00 43.74 2.87
1959 2569 7.338710 AGTTATATACACAAGCACAGGTCAAT 58.661 34.615 0.00 0.00 0.00 2.57
1999 2611 6.935208 ACACCATCATCAAGTCATCATCTATG 59.065 38.462 0.00 0.00 36.88 2.23
2011 2623 4.482386 CTCAGCAAAACACCATCATCAAG 58.518 43.478 0.00 0.00 0.00 3.02
2029 2641 5.514274 ACACCATTTGTTACAAACCTCAG 57.486 39.130 13.01 5.34 33.09 3.35
2061 2674 0.907704 AACGGAGGGAGTACCATGCA 60.908 55.000 0.00 0.00 43.89 3.96
2069 2682 5.687166 TTATATTTGTGAACGGAGGGAGT 57.313 39.130 0.00 0.00 0.00 3.85
2125 2738 9.507329 AGTATATTTGTTCACTCATTTGTGTCT 57.493 29.630 0.00 0.00 38.90 3.41
2154 2767 9.608617 CGTAAATCAGATGTATATAGACACGTT 57.391 33.333 1.52 0.00 30.52 3.99
2155 2768 8.996271 TCGTAAATCAGATGTATATAGACACGT 58.004 33.333 1.52 0.00 30.52 4.49
2156 2769 9.821662 TTCGTAAATCAGATGTATATAGACACG 57.178 33.333 1.52 0.00 30.52 4.49
2167 2780 8.718734 GGTCTAACTTTTTCGTAAATCAGATGT 58.281 33.333 0.00 0.00 0.00 3.06
2168 2781 8.717821 TGGTCTAACTTTTTCGTAAATCAGATG 58.282 33.333 0.00 0.00 0.00 2.90
2169 2782 8.842358 TGGTCTAACTTTTTCGTAAATCAGAT 57.158 30.769 0.00 0.00 0.00 2.90
2170 2783 8.842358 ATGGTCTAACTTTTTCGTAAATCAGA 57.158 30.769 0.00 0.00 0.00 3.27
2171 2784 8.936864 AGATGGTCTAACTTTTTCGTAAATCAG 58.063 33.333 0.00 0.00 0.00 2.90
2172 2785 8.842358 AGATGGTCTAACTTTTTCGTAAATCA 57.158 30.769 0.00 0.00 0.00 2.57
2186 2799 8.979574 CGGTTCAGAAATATAAGATGGTCTAAC 58.020 37.037 0.00 0.00 0.00 2.34
2187 2800 8.920174 TCGGTTCAGAAATATAAGATGGTCTAA 58.080 33.333 0.00 0.00 0.00 2.10
2188 2801 8.473358 TCGGTTCAGAAATATAAGATGGTCTA 57.527 34.615 0.00 0.00 0.00 2.59
2189 2802 7.361457 TCGGTTCAGAAATATAAGATGGTCT 57.639 36.000 0.00 0.00 0.00 3.85
2190 2803 6.647067 CCTCGGTTCAGAAATATAAGATGGTC 59.353 42.308 0.00 0.00 0.00 4.02
2191 2804 6.464465 CCCTCGGTTCAGAAATATAAGATGGT 60.464 42.308 0.00 0.00 0.00 3.55
2192 2805 5.934625 CCCTCGGTTCAGAAATATAAGATGG 59.065 44.000 0.00 0.00 0.00 3.51
2193 2806 6.759272 TCCCTCGGTTCAGAAATATAAGATG 58.241 40.000 0.00 0.00 0.00 2.90
2194 2807 6.555360 ACTCCCTCGGTTCAGAAATATAAGAT 59.445 38.462 0.00 0.00 0.00 2.40
2195 2808 5.897824 ACTCCCTCGGTTCAGAAATATAAGA 59.102 40.000 0.00 0.00 0.00 2.10
2196 2809 6.163135 ACTCCCTCGGTTCAGAAATATAAG 57.837 41.667 0.00 0.00 0.00 1.73
2197 2810 7.562454 TCTTACTCCCTCGGTTCAGAAATATAA 59.438 37.037 0.00 0.00 0.00 0.98
2198 2811 7.064866 TCTTACTCCCTCGGTTCAGAAATATA 58.935 38.462 0.00 0.00 0.00 0.86
2199 2812 5.897824 TCTTACTCCCTCGGTTCAGAAATAT 59.102 40.000 0.00 0.00 0.00 1.28
2200 2813 5.266788 TCTTACTCCCTCGGTTCAGAAATA 58.733 41.667 0.00 0.00 0.00 1.40
2201 2814 4.094476 TCTTACTCCCTCGGTTCAGAAAT 58.906 43.478 0.00 0.00 0.00 2.17
2202 2815 3.503365 TCTTACTCCCTCGGTTCAGAAA 58.497 45.455 0.00 0.00 0.00 2.52
2203 2816 3.090037 CTCTTACTCCCTCGGTTCAGAA 58.910 50.000 0.00 0.00 0.00 3.02
2204 2817 2.620886 CCTCTTACTCCCTCGGTTCAGA 60.621 54.545 0.00 0.00 0.00 3.27
2205 2818 1.751924 CCTCTTACTCCCTCGGTTCAG 59.248 57.143 0.00 0.00 0.00 3.02
2206 2819 1.076677 ACCTCTTACTCCCTCGGTTCA 59.923 52.381 0.00 0.00 0.00 3.18
2207 2820 1.849977 ACCTCTTACTCCCTCGGTTC 58.150 55.000 0.00 0.00 0.00 3.62
2208 2821 3.684408 ATACCTCTTACTCCCTCGGTT 57.316 47.619 0.00 0.00 0.00 4.44
2209 2822 3.684408 AATACCTCTTACTCCCTCGGT 57.316 47.619 0.00 0.00 0.00 4.69
2210 2823 4.395542 CGATAATACCTCTTACTCCCTCGG 59.604 50.000 0.00 0.00 0.00 4.63
2211 2824 4.395542 CCGATAATACCTCTTACTCCCTCG 59.604 50.000 0.00 0.00 0.00 4.63
2212 2825 5.568392 TCCGATAATACCTCTTACTCCCTC 58.432 45.833 0.00 0.00 0.00 4.30
2213 2826 5.595814 TCCGATAATACCTCTTACTCCCT 57.404 43.478 0.00 0.00 0.00 4.20
2214 2827 5.715753 ACATCCGATAATACCTCTTACTCCC 59.284 44.000 0.00 0.00 0.00 4.30
2215 2828 6.837471 ACATCCGATAATACCTCTTACTCC 57.163 41.667 0.00 0.00 0.00 3.85
2253 2866 5.549742 AGATGTTGCCTCCATTTCAAAAA 57.450 34.783 0.00 0.00 0.00 1.94
2254 2867 5.549742 AAGATGTTGCCTCCATTTCAAAA 57.450 34.783 0.00 0.00 0.00 2.44
2255 2868 5.299148 CAAAGATGTTGCCTCCATTTCAAA 58.701 37.500 0.00 0.00 0.00 2.69
2256 2869 4.800249 GCAAAGATGTTGCCTCCATTTCAA 60.800 41.667 0.00 0.00 39.38 2.69
2257 2870 3.306225 GCAAAGATGTTGCCTCCATTTCA 60.306 43.478 0.00 0.00 39.38 2.69
2258 2871 3.256558 GCAAAGATGTTGCCTCCATTTC 58.743 45.455 0.00 0.00 39.38 2.17
2259 2872 2.633967 TGCAAAGATGTTGCCTCCATTT 59.366 40.909 8.47 0.00 44.32 2.32
2260 2873 2.250031 TGCAAAGATGTTGCCTCCATT 58.750 42.857 8.47 0.00 44.32 3.16
2261 2874 1.927487 TGCAAAGATGTTGCCTCCAT 58.073 45.000 8.47 0.00 44.32 3.41
2262 2875 1.820519 GATGCAAAGATGTTGCCTCCA 59.179 47.619 8.47 0.00 44.32 3.86
2263 2876 1.820519 TGATGCAAAGATGTTGCCTCC 59.179 47.619 8.47 0.00 44.32 4.30
2264 2877 3.490419 GGATGATGCAAAGATGTTGCCTC 60.490 47.826 8.47 8.63 44.32 4.70
2265 2878 2.429610 GGATGATGCAAAGATGTTGCCT 59.570 45.455 8.47 0.00 44.32 4.75
2266 2879 2.166870 TGGATGATGCAAAGATGTTGCC 59.833 45.455 8.47 0.00 44.32 4.52
2267 2880 3.513680 TGGATGATGCAAAGATGTTGC 57.486 42.857 4.12 4.12 45.11 4.17
2268 2881 8.657074 AATTAATGGATGATGCAAAGATGTTG 57.343 30.769 0.00 0.00 0.00 3.33
2270 2883 9.976511 CTTAATTAATGGATGATGCAAAGATGT 57.023 29.630 0.00 0.00 0.00 3.06
2273 2886 9.631257 TCTCTTAATTAATGGATGATGCAAAGA 57.369 29.630 0.00 0.00 0.00 2.52
2274 2887 9.894783 CTCTCTTAATTAATGGATGATGCAAAG 57.105 33.333 0.00 0.00 0.00 2.77
2275 2888 9.631257 TCTCTCTTAATTAATGGATGATGCAAA 57.369 29.630 0.00 0.00 0.00 3.68
2276 2889 9.631257 TTCTCTCTTAATTAATGGATGATGCAA 57.369 29.630 0.00 0.00 0.00 4.08
2277 2890 9.631257 TTTCTCTCTTAATTAATGGATGATGCA 57.369 29.630 0.00 0.00 0.00 3.96
2294 2907 9.278978 GGAAAAGAAACACTCTATTTCTCTCTT 57.721 33.333 0.75 0.00 43.91 2.85
2295 2908 8.432805 TGGAAAAGAAACACTCTATTTCTCTCT 58.567 33.333 0.75 0.00 43.91 3.10
2296 2909 8.608844 TGGAAAAGAAACACTCTATTTCTCTC 57.391 34.615 0.75 2.05 43.91 3.20
2297 2910 8.214364 ACTGGAAAAGAAACACTCTATTTCTCT 58.786 33.333 0.75 0.00 43.91 3.10
2298 2911 8.384607 ACTGGAAAAGAAACACTCTATTTCTC 57.615 34.615 0.75 0.00 43.91 2.87
2299 2912 9.274206 GTACTGGAAAAGAAACACTCTATTTCT 57.726 33.333 0.00 0.00 46.07 2.52
2300 2913 8.221766 CGTACTGGAAAAGAAACACTCTATTTC 58.778 37.037 0.00 0.00 36.49 2.17
2301 2914 7.929785 TCGTACTGGAAAAGAAACACTCTATTT 59.070 33.333 0.00 0.00 32.46 1.40
2302 2915 7.439381 TCGTACTGGAAAAGAAACACTCTATT 58.561 34.615 0.00 0.00 32.46 1.73
2303 2916 6.989659 TCGTACTGGAAAAGAAACACTCTAT 58.010 36.000 0.00 0.00 32.46 1.98
2304 2917 6.395426 TCGTACTGGAAAAGAAACACTCTA 57.605 37.500 0.00 0.00 32.46 2.43
2305 2918 5.272283 TCGTACTGGAAAAGAAACACTCT 57.728 39.130 0.00 0.00 35.13 3.24
2306 2919 5.107065 CCATCGTACTGGAAAAGAAACACTC 60.107 44.000 0.00 0.00 38.69 3.51
2307 2920 4.755123 CCATCGTACTGGAAAAGAAACACT 59.245 41.667 0.00 0.00 38.69 3.55
2308 2921 4.612939 GCCATCGTACTGGAAAAGAAACAC 60.613 45.833 5.35 0.00 38.69 3.32
2309 2922 3.500680 GCCATCGTACTGGAAAAGAAACA 59.499 43.478 5.35 0.00 38.69 2.83
2310 2923 3.119955 GGCCATCGTACTGGAAAAGAAAC 60.120 47.826 0.00 0.00 38.69 2.78
2311 2924 3.078837 GGCCATCGTACTGGAAAAGAAA 58.921 45.455 0.00 0.00 38.69 2.52
2312 2925 2.039216 TGGCCATCGTACTGGAAAAGAA 59.961 45.455 0.00 0.00 38.69 2.52
2313 2926 1.626321 TGGCCATCGTACTGGAAAAGA 59.374 47.619 0.00 0.00 38.69 2.52
2314 2927 2.107950 TGGCCATCGTACTGGAAAAG 57.892 50.000 0.00 0.00 38.69 2.27
2315 2928 2.570415 TTGGCCATCGTACTGGAAAA 57.430 45.000 6.09 0.00 38.69 2.29
2316 2929 2.026729 TGATTGGCCATCGTACTGGAAA 60.027 45.455 6.09 0.00 38.69 3.13
2317 2930 1.557371 TGATTGGCCATCGTACTGGAA 59.443 47.619 6.09 0.00 38.69 3.53
2318 2931 1.199615 TGATTGGCCATCGTACTGGA 58.800 50.000 6.09 0.00 38.69 3.86
2319 2932 2.146342 GATGATTGGCCATCGTACTGG 58.854 52.381 6.09 0.00 39.45 4.00
2320 2933 2.146342 GGATGATTGGCCATCGTACTG 58.854 52.381 6.09 0.00 42.83 2.74
2321 2934 2.050144 AGGATGATTGGCCATCGTACT 58.950 47.619 6.09 11.15 42.83 2.73
2322 2935 2.146342 CAGGATGATTGGCCATCGTAC 58.854 52.381 6.09 8.86 42.83 3.67
2323 2936 1.768275 ACAGGATGATTGGCCATCGTA 59.232 47.619 6.09 0.00 42.83 3.43
2324 2937 0.548031 ACAGGATGATTGGCCATCGT 59.452 50.000 6.09 7.99 42.83 3.73
2325 2938 1.202734 AGACAGGATGATTGGCCATCG 60.203 52.381 6.09 0.00 42.83 3.84
2326 2939 2.228059 CAGACAGGATGATTGGCCATC 58.772 52.381 6.09 7.28 39.69 3.51
2327 2940 1.133575 CCAGACAGGATGATTGGCCAT 60.134 52.381 6.09 0.00 39.69 4.40
2328 2941 0.256752 CCAGACAGGATGATTGGCCA 59.743 55.000 0.00 0.00 39.69 5.36
2329 2942 3.106738 CCAGACAGGATGATTGGCC 57.893 57.895 0.00 0.00 39.69 5.36
2331 2944 1.386533 GTGCCAGACAGGATGATTGG 58.613 55.000 0.00 0.00 42.86 3.16
2332 2945 1.012086 CGTGCCAGACAGGATGATTG 58.988 55.000 0.00 0.00 39.69 2.67
2333 2946 0.615331 ACGTGCCAGACAGGATGATT 59.385 50.000 0.00 0.00 39.69 2.57
2334 2947 0.107993 CACGTGCCAGACAGGATGAT 60.108 55.000 0.82 0.00 39.69 2.45
2335 2948 1.293179 CACGTGCCAGACAGGATGA 59.707 57.895 0.82 0.00 39.69 2.92
2336 2949 1.742880 CCACGTGCCAGACAGGATG 60.743 63.158 10.91 0.00 46.00 3.51
2337 2950 2.665000 CCACGTGCCAGACAGGAT 59.335 61.111 10.91 0.00 41.22 3.24
2338 2951 4.314440 GCCACGTGCCAGACAGGA 62.314 66.667 10.91 0.00 41.22 3.86
2339 2952 4.624364 TGCCACGTGCCAGACAGG 62.624 66.667 10.91 0.00 40.16 4.00
2340 2953 3.349006 GTGCCACGTGCCAGACAG 61.349 66.667 10.91 0.00 40.16 3.51
2341 2954 4.927782 GGTGCCACGTGCCAGACA 62.928 66.667 10.91 0.00 40.16 3.41
2370 2983 4.293648 TCTGACGGCACCACCACG 62.294 66.667 0.00 0.00 39.03 4.94
2371 2984 2.665185 GTCTGACGGCACCACCAC 60.665 66.667 0.00 0.00 39.03 4.16
2372 2985 4.293648 CGTCTGACGGCACCACCA 62.294 66.667 21.78 0.00 38.08 4.17
2373 2986 3.986006 TCGTCTGACGGCACCACC 61.986 66.667 27.69 0.00 42.81 4.61
2374 2987 2.733593 GTCGTCTGACGGCACCAC 60.734 66.667 27.79 15.38 46.84 4.16
2382 2995 1.337821 GGTCATTGTCGTCGTCTGAC 58.662 55.000 0.00 0.00 41.91 3.51
2383 2996 0.242825 GGGTCATTGTCGTCGTCTGA 59.757 55.000 0.00 0.00 0.00 3.27
2384 2997 1.071019 CGGGTCATTGTCGTCGTCTG 61.071 60.000 0.00 0.00 0.00 3.51
2385 2998 1.211969 CGGGTCATTGTCGTCGTCT 59.788 57.895 0.00 0.00 0.00 4.18
2386 2999 0.179145 ATCGGGTCATTGTCGTCGTC 60.179 55.000 0.00 0.00 0.00 4.20
2387 3000 0.457853 CATCGGGTCATTGTCGTCGT 60.458 55.000 0.00 0.00 0.00 4.34
2388 3001 1.145759 CCATCGGGTCATTGTCGTCG 61.146 60.000 0.00 0.00 0.00 5.12
2389 3002 2.677971 CCATCGGGTCATTGTCGTC 58.322 57.895 0.00 0.00 0.00 4.20
2390 3003 4.932789 CCATCGGGTCATTGTCGT 57.067 55.556 0.00 0.00 0.00 4.34
2400 3013 4.221422 ATGTCGCGGACCATCGGG 62.221 66.667 6.13 0.00 43.10 5.14
2401 3014 2.658593 GATGTCGCGGACCATCGG 60.659 66.667 6.13 0.00 0.00 4.18
2402 3015 1.518352 TTGATGTCGCGGACCATCG 60.518 57.895 20.99 0.00 0.00 3.84
2403 3016 1.429148 GGTTGATGTCGCGGACCATC 61.429 60.000 20.21 20.21 0.00 3.51
2404 3017 1.449601 GGTTGATGTCGCGGACCAT 60.450 57.895 6.13 6.39 0.00 3.55
2405 3018 2.047655 GGTTGATGTCGCGGACCA 60.048 61.111 6.13 0.64 0.00 4.02
2406 3019 1.024579 ATTGGTTGATGTCGCGGACC 61.025 55.000 6.13 6.04 0.00 4.46
2407 3020 0.096976 CATTGGTTGATGTCGCGGAC 59.903 55.000 6.13 3.78 0.00 4.79
2408 3021 1.643868 GCATTGGTTGATGTCGCGGA 61.644 55.000 6.13 0.00 0.00 5.54
2409 3022 1.226379 GCATTGGTTGATGTCGCGG 60.226 57.895 6.13 0.00 0.00 6.46
2410 3023 0.247814 GAGCATTGGTTGATGTCGCG 60.248 55.000 0.00 0.00 0.00 5.87
2411 3024 0.099436 GGAGCATTGGTTGATGTCGC 59.901 55.000 0.00 0.00 0.00 5.19
2412 3025 0.734889 GGGAGCATTGGTTGATGTCG 59.265 55.000 0.00 0.00 0.00 4.35
2413 3026 2.019984 GAGGGAGCATTGGTTGATGTC 58.980 52.381 0.00 0.00 0.00 3.06
2414 3027 1.679944 CGAGGGAGCATTGGTTGATGT 60.680 52.381 0.00 0.00 0.00 3.06
2415 3028 1.019673 CGAGGGAGCATTGGTTGATG 58.980 55.000 0.00 0.00 0.00 3.07
2416 3029 0.107017 CCGAGGGAGCATTGGTTGAT 60.107 55.000 0.00 0.00 0.00 2.57
2417 3030 1.299648 CCGAGGGAGCATTGGTTGA 59.700 57.895 0.00 0.00 0.00 3.18
2418 3031 2.409870 GCCGAGGGAGCATTGGTTG 61.410 63.158 0.00 0.00 0.00 3.77
2419 3032 2.044946 GCCGAGGGAGCATTGGTT 60.045 61.111 0.00 0.00 0.00 3.67
2420 3033 3.329889 TGCCGAGGGAGCATTGGT 61.330 61.111 0.00 0.00 34.69 3.67
2425 3038 2.586245 CTTCATGCCGAGGGAGCA 59.414 61.111 0.00 0.00 45.94 4.26
2426 3039 2.203126 CCTTCATGCCGAGGGAGC 60.203 66.667 0.00 0.00 43.73 4.70
2427 3040 3.634202 TCCTTCATGCCGAGGGAG 58.366 61.111 8.99 0.00 44.64 4.30
2429 3042 0.745845 CAACTCCTTCATGCCGAGGG 60.746 60.000 8.99 0.00 42.35 4.30
2430 3043 0.745845 CCAACTCCTTCATGCCGAGG 60.746 60.000 7.97 6.04 0.00 4.63
2431 3044 0.250234 TCCAACTCCTTCATGCCGAG 59.750 55.000 0.00 0.00 0.00 4.63
2432 3045 0.911769 ATCCAACTCCTTCATGCCGA 59.088 50.000 0.00 0.00 0.00 5.54
2433 3046 1.019673 CATCCAACTCCTTCATGCCG 58.980 55.000 0.00 0.00 0.00 5.69
2434 3047 1.747355 CACATCCAACTCCTTCATGCC 59.253 52.381 0.00 0.00 0.00 4.40
2435 3048 1.747355 CCACATCCAACTCCTTCATGC 59.253 52.381 0.00 0.00 0.00 4.06
2436 3049 2.372264 CCCACATCCAACTCCTTCATG 58.628 52.381 0.00 0.00 0.00 3.07
2437 3050 1.341383 GCCCACATCCAACTCCTTCAT 60.341 52.381 0.00 0.00 0.00 2.57
2438 3051 0.038166 GCCCACATCCAACTCCTTCA 59.962 55.000 0.00 0.00 0.00 3.02
2439 3052 0.681243 GGCCCACATCCAACTCCTTC 60.681 60.000 0.00 0.00 0.00 3.46
2440 3053 1.384191 GGCCCACATCCAACTCCTT 59.616 57.895 0.00 0.00 0.00 3.36
2441 3054 2.616458 GGGCCCACATCCAACTCCT 61.616 63.158 19.95 0.00 0.00 3.69
2442 3055 2.043953 GGGCCCACATCCAACTCC 60.044 66.667 19.95 0.00 0.00 3.85
2443 3056 2.043953 GGGGCCCACATCCAACTC 60.044 66.667 26.86 0.00 0.00 3.01
2444 3057 3.672503 GGGGGCCCACATCCAACT 61.673 66.667 26.86 0.00 35.81 3.16
2463 3076 6.225926 AGGAACTTTGCATTGATCCGATGC 62.226 45.833 19.02 19.02 43.53 3.91
2464 3077 3.379372 AGGAACTTTGCATTGATCCGATG 59.621 43.478 9.12 0.00 27.25 3.84
2465 3078 3.379372 CAGGAACTTTGCATTGATCCGAT 59.621 43.478 9.12 0.00 34.60 4.18
2466 3079 2.749076 CAGGAACTTTGCATTGATCCGA 59.251 45.455 9.12 0.00 34.60 4.55
2467 3080 2.159338 CCAGGAACTTTGCATTGATCCG 60.159 50.000 9.12 5.81 34.60 4.18
2468 3081 2.417787 GCCAGGAACTTTGCATTGATCC 60.418 50.000 7.41 7.41 34.60 3.36
2469 3082 2.231964 TGCCAGGAACTTTGCATTGATC 59.768 45.455 0.00 0.00 38.50 2.92
2470 3083 2.250031 TGCCAGGAACTTTGCATTGAT 58.750 42.857 0.00 0.00 38.50 2.57
2471 3084 1.702182 TGCCAGGAACTTTGCATTGA 58.298 45.000 0.00 0.00 38.50 2.57
2485 3098 1.959042 AACTTCGATGCCTATGCCAG 58.041 50.000 0.00 0.00 36.33 4.85
2486 3099 2.288666 GAAACTTCGATGCCTATGCCA 58.711 47.619 0.00 0.00 36.33 4.92
2507 3120 2.568696 TCTTCTCTACATCGCAGTGC 57.431 50.000 4.58 4.58 0.00 4.40
2508 3121 3.443037 CCTTCTTCTCTACATCGCAGTG 58.557 50.000 0.00 0.00 0.00 3.66
2509 3122 2.159170 GCCTTCTTCTCTACATCGCAGT 60.159 50.000 0.00 0.00 0.00 4.40
2510 3123 2.468831 GCCTTCTTCTCTACATCGCAG 58.531 52.381 0.00 0.00 0.00 5.18
2511 3124 1.137086 GGCCTTCTTCTCTACATCGCA 59.863 52.381 0.00 0.00 0.00 5.10
2512 3125 1.859383 GGCCTTCTTCTCTACATCGC 58.141 55.000 0.00 0.00 0.00 4.58
2513 3126 1.676529 TCGGCCTTCTTCTCTACATCG 59.323 52.381 0.00 0.00 0.00 3.84
2514 3127 2.035321 CCTCGGCCTTCTTCTCTACATC 59.965 54.545 0.00 0.00 0.00 3.06
2515 3128 2.035632 CCTCGGCCTTCTTCTCTACAT 58.964 52.381 0.00 0.00 0.00 2.29
2516 3129 1.005569 TCCTCGGCCTTCTTCTCTACA 59.994 52.381 0.00 0.00 0.00 2.74
2517 3130 1.406180 GTCCTCGGCCTTCTTCTCTAC 59.594 57.143 0.00 0.00 0.00 2.59
2518 3131 1.685491 GGTCCTCGGCCTTCTTCTCTA 60.685 57.143 0.00 0.00 0.00 2.43
2519 3132 0.973496 GGTCCTCGGCCTTCTTCTCT 60.973 60.000 0.00 0.00 0.00 3.10
2520 3133 1.258445 TGGTCCTCGGCCTTCTTCTC 61.258 60.000 0.00 0.00 0.00 2.87
2521 3134 0.836400 TTGGTCCTCGGCCTTCTTCT 60.836 55.000 0.00 0.00 0.00 2.85
2522 3135 0.391793 CTTGGTCCTCGGCCTTCTTC 60.392 60.000 0.00 0.00 0.00 2.87
2523 3136 1.679898 CTTGGTCCTCGGCCTTCTT 59.320 57.895 0.00 0.00 0.00 2.52
2524 3137 2.960688 GCTTGGTCCTCGGCCTTCT 61.961 63.158 0.00 0.00 0.00 2.85
2525 3138 2.436824 GCTTGGTCCTCGGCCTTC 60.437 66.667 0.00 0.00 0.00 3.46
2526 3139 4.035102 GGCTTGGTCCTCGGCCTT 62.035 66.667 0.00 0.00 41.20 4.35
2530 3143 4.760047 CACGGGCTTGGTCCTCGG 62.760 72.222 0.00 0.00 0.00 4.63
2545 3158 4.994201 TGGCGACGACACGAGCAC 62.994 66.667 0.00 7.66 36.33 4.40
2546 3159 4.273257 TTGGCGACGACACGAGCA 62.273 61.111 0.80 0.00 36.33 4.26
2547 3160 3.470567 CTTGGCGACGACACGAGC 61.471 66.667 0.80 0.00 35.09 5.03
2548 3161 2.805353 CCTTGGCGACGACACGAG 60.805 66.667 9.05 1.65 35.09 4.18
2549 3162 3.263503 CTCCTTGGCGACGACACGA 62.264 63.158 9.05 4.08 35.09 4.35
2550 3163 2.805353 CTCCTTGGCGACGACACG 60.805 66.667 0.80 0.00 0.00 4.49
2551 3164 3.112709 GCTCCTTGGCGACGACAC 61.113 66.667 0.80 0.00 0.00 3.67
2552 3165 3.158537 TTGCTCCTTGGCGACGACA 62.159 57.895 0.00 0.00 34.52 4.35
2553 3166 2.357034 TTGCTCCTTGGCGACGAC 60.357 61.111 0.00 0.00 34.52 4.34
2554 3167 2.048222 CTTGCTCCTTGGCGACGA 60.048 61.111 0.00 0.00 34.52 4.20
2555 3168 3.793144 GCTTGCTCCTTGGCGACG 61.793 66.667 0.00 0.00 34.52 5.12
2556 3169 3.435186 GGCTTGCTCCTTGGCGAC 61.435 66.667 0.00 0.00 34.52 5.19
2557 3170 4.722700 GGGCTTGCTCCTTGGCGA 62.723 66.667 0.00 0.00 34.52 5.54
2559 3172 1.953231 GAATGGGCTTGCTCCTTGGC 61.953 60.000 0.00 0.00 0.00 4.52
2560 3173 1.325476 GGAATGGGCTTGCTCCTTGG 61.325 60.000 0.00 0.00 0.00 3.61
2561 3174 1.660560 CGGAATGGGCTTGCTCCTTG 61.661 60.000 0.00 0.00 0.00 3.61
2562 3175 1.379044 CGGAATGGGCTTGCTCCTT 60.379 57.895 0.00 0.00 0.00 3.36
2563 3176 2.142292 AACGGAATGGGCTTGCTCCT 62.142 55.000 0.00 0.00 0.00 3.69
2564 3177 1.657751 GAACGGAATGGGCTTGCTCC 61.658 60.000 0.00 0.00 0.00 4.70
2565 3178 0.960364 TGAACGGAATGGGCTTGCTC 60.960 55.000 0.00 0.00 0.00 4.26
2566 3179 0.962356 CTGAACGGAATGGGCTTGCT 60.962 55.000 0.00 0.00 0.00 3.91
2567 3180 1.244019 ACTGAACGGAATGGGCTTGC 61.244 55.000 0.00 0.00 0.00 4.01
2568 3181 0.804989 GACTGAACGGAATGGGCTTG 59.195 55.000 0.00 0.00 0.00 4.01
2569 3182 0.322546 GGACTGAACGGAATGGGCTT 60.323 55.000 0.00 0.00 0.00 4.35
2570 3183 1.299976 GGACTGAACGGAATGGGCT 59.700 57.895 0.00 0.00 0.00 5.19
2571 3184 1.749258 GGGACTGAACGGAATGGGC 60.749 63.158 0.00 0.00 0.00 5.36
2572 3185 0.107654 GAGGGACTGAACGGAATGGG 60.108 60.000 0.00 0.00 41.55 4.00
2573 3186 0.460284 CGAGGGACTGAACGGAATGG 60.460 60.000 0.00 0.00 41.55 3.16
2574 3187 1.084370 GCGAGGGACTGAACGGAATG 61.084 60.000 0.00 0.00 41.55 2.67
2575 3188 1.218316 GCGAGGGACTGAACGGAAT 59.782 57.895 0.00 0.00 41.55 3.01
2576 3189 2.654877 GCGAGGGACTGAACGGAA 59.345 61.111 0.00 0.00 41.55 4.30
2577 3190 3.379445 GGCGAGGGACTGAACGGA 61.379 66.667 0.00 0.00 41.55 4.69
2578 3191 4.796231 CGGCGAGGGACTGAACGG 62.796 72.222 0.00 0.00 41.55 4.44
2579 3192 4.796231 CCGGCGAGGGACTGAACG 62.796 72.222 9.30 0.00 41.55 3.95
2586 3199 4.853142 ATGTAGGCCGGCGAGGGA 62.853 66.667 22.54 2.94 41.48 4.20
2587 3200 4.609018 CATGTAGGCCGGCGAGGG 62.609 72.222 22.54 3.49 41.48 4.30
2588 3201 3.536917 TCATGTAGGCCGGCGAGG 61.537 66.667 22.54 6.01 44.97 4.63
2589 3202 2.279517 GTCATGTAGGCCGGCGAG 60.280 66.667 22.54 6.20 0.00 5.03
2590 3203 2.355986 AAGTCATGTAGGCCGGCGA 61.356 57.895 22.54 8.19 0.00 5.54
2591 3204 2.173669 CAAGTCATGTAGGCCGGCG 61.174 63.158 22.54 5.20 0.00 6.46
2592 3205 1.819632 CCAAGTCATGTAGGCCGGC 60.820 63.158 21.18 21.18 0.00 6.13
2593 3206 1.904771 TCCAAGTCATGTAGGCCGG 59.095 57.895 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.