Multiple sequence alignment - TraesCS5D01G532600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G532600 chr5D 100.000 6851 0 0 1 6851 547540975 547547825 0.000000e+00 12652.0
1 TraesCS5D01G532600 chr5D 78.934 1220 157 56 4770 5918 547714195 547715385 0.000000e+00 737.0
2 TraesCS5D01G532600 chr5D 82.328 464 50 19 2275 2716 547709326 547709779 2.330000e-99 374.0
3 TraesCS5D01G532600 chr5D 79.592 392 65 11 358 737 547707419 547707807 4.070000e-67 267.0
4 TraesCS5D01G532600 chr5D 81.494 308 41 8 3230 3526 547711361 547711663 8.880000e-59 239.0
5 TraesCS5D01G532600 chr5D 95.868 121 4 1 747 866 461071641 461071761 1.950000e-45 195.0
6 TraesCS5D01G532600 chr5D 83.902 205 27 4 6490 6692 438373586 438373386 2.520000e-44 191.0
7 TraesCS5D01G532600 chr5B 94.734 1671 67 7 1826 3482 691163701 691165364 0.000000e+00 2579.0
8 TraesCS5D01G532600 chr5B 94.282 1399 57 7 1634 3009 691513834 691515232 0.000000e+00 2119.0
9 TraesCS5D01G532600 chr5B 93.175 1392 58 8 1634 3009 691180098 691181468 0.000000e+00 2010.0
10 TraesCS5D01G532600 chr5B 88.854 1265 101 22 2278 3518 691589718 691590966 0.000000e+00 1519.0
11 TraesCS5D01G532600 chr5B 96.169 757 24 5 1 756 691512319 691513071 0.000000e+00 1232.0
12 TraesCS5D01G532600 chr5B 90.315 888 38 18 3882 4764 691187835 691188679 0.000000e+00 1120.0
13 TraesCS5D01G532600 chr5B 96.582 673 19 4 829 1501 691513085 691513753 0.000000e+00 1112.0
14 TraesCS5D01G532600 chr5B 90.885 757 58 8 4859 5604 691517993 691518749 0.000000e+00 1005.0
15 TraesCS5D01G532600 chr5B 93.458 642 26 2 863 1504 691162939 691163564 0.000000e+00 939.0
16 TraesCS5D01G532600 chr5B 90.975 687 52 6 4770 5450 691167463 691168145 0.000000e+00 917.0
17 TraesCS5D01G532600 chr5B 91.486 646 42 5 863 1504 691179382 691180018 0.000000e+00 876.0
18 TraesCS5D01G532600 chr5B 92.857 616 14 11 3717 4322 691515981 691516576 0.000000e+00 867.0
19 TraesCS5D01G532600 chr5B 89.565 690 36 14 3207 3887 691181462 691182124 0.000000e+00 843.0
20 TraesCS5D01G532600 chr5B 91.922 619 22 10 3719 4327 691165948 691166548 0.000000e+00 841.0
21 TraesCS5D01G532600 chr5B 92.555 591 36 6 4770 5355 691189031 691189618 0.000000e+00 841.0
22 TraesCS5D01G532600 chr5B 94.510 510 27 1 4256 4764 691516629 691517138 0.000000e+00 785.0
23 TraesCS5D01G532600 chr5B 93.529 510 32 1 4256 4764 691166596 691167105 0.000000e+00 758.0
24 TraesCS5D01G532600 chr5B 96.915 389 10 2 363 750 691162555 691162942 0.000000e+00 651.0
25 TraesCS5D01G532600 chr5B 87.992 508 46 10 4834 5334 691591883 691592382 2.750000e-163 586.0
26 TraesCS5D01G532600 chr5B 79.774 796 77 38 5608 6343 691198542 691199313 1.030000e-137 501.0
27 TraesCS5D01G532600 chr5B 93.808 323 12 1 3405 3719 691515595 691515917 4.810000e-131 479.0
28 TraesCS5D01G532600 chr5B 78.913 773 75 40 5626 6343 691168180 691168919 1.750000e-120 444.0
29 TraesCS5D01G532600 chr5B 96.124 258 10 0 1 258 691508719 691508976 8.220000e-114 422.0
30 TraesCS5D01G532600 chr5B 95.294 255 7 1 47 301 691162275 691162524 3.850000e-107 399.0
31 TraesCS5D01G532600 chr5B 79.553 626 72 23 5769 6364 691521316 691521915 4.980000e-106 396.0
32 TraesCS5D01G532600 chr5B 92.369 249 11 1 3479 3719 691165634 691165882 1.410000e-91 348.0
33 TraesCS5D01G532600 chr5B 93.981 216 8 2 3207 3421 691515226 691515437 8.570000e-84 322.0
34 TraesCS5D01G532600 chr5B 90.361 166 15 1 6463 6628 235446041 235446205 4.160000e-52 217.0
35 TraesCS5D01G532600 chr5B 96.491 114 4 0 4574 4687 38365237 38365124 9.070000e-44 189.0
36 TraesCS5D01G532600 chr5B 95.745 94 2 2 4770 4863 691517495 691517586 4.280000e-32 150.0
37 TraesCS5D01G532600 chr5B 91.667 72 5 1 4256 4327 691516570 691516640 1.570000e-16 99.0
38 TraesCS5D01G532600 chr5B 100.000 50 0 0 1504 1553 691180051 691180100 7.320000e-15 93.5
39 TraesCS5D01G532600 chr5B 97.778 45 1 0 1509 1553 691163602 691163646 2.050000e-10 78.7
40 TraesCS5D01G532600 chr4A 90.453 1875 124 21 1884 3719 618270964 618272822 0.000000e+00 2420.0
41 TraesCS5D01G532600 chr4A 92.102 1456 60 13 4770 6182 618274185 618275628 0.000000e+00 2001.0
42 TraesCS5D01G532600 chr4A 87.444 892 58 28 3717 4574 618272886 618273757 0.000000e+00 977.0
43 TraesCS5D01G532600 chr4A 92.089 493 32 5 863 1350 618268849 618269339 0.000000e+00 688.0
44 TraesCS5D01G532600 chr4A 89.796 392 33 6 361 750 618268466 618268852 4.770000e-136 496.0
45 TraesCS5D01G532600 chr4A 87.586 435 45 7 5166 5594 618285838 618286269 4.770000e-136 496.0
46 TraesCS5D01G532600 chr4A 80.635 630 100 16 4931 5549 618308506 618307888 1.040000e-127 468.0
47 TraesCS5D01G532600 chr4A 76.374 910 103 47 5599 6415 618286365 618287255 3.000000e-103 387.0
48 TraesCS5D01G532600 chr4A 84.143 391 46 12 2334 2718 618310750 618310370 1.400000e-96 364.0
49 TraesCS5D01G532600 chr4A 87.633 283 12 5 1634 1901 618270618 618270892 2.400000e-79 307.0
50 TraesCS5D01G532600 chr4A 96.703 182 5 1 6259 6440 618277162 618277342 1.120000e-77 302.0
51 TraesCS5D01G532600 chr4A 81.877 309 43 6 1 299 618268145 618268450 1.480000e-61 248.0
52 TraesCS5D01G532600 chr4A 82.759 232 35 5 6462 6692 177613216 177613443 1.170000e-47 202.0
53 TraesCS5D01G532600 chr4A 94.444 126 6 1 1344 1469 618269394 618269518 7.010000e-45 193.0
54 TraesCS5D01G532600 chr4A 85.185 162 14 5 6127 6282 618275611 618275768 2.560000e-34 158.0
55 TraesCS5D01G532600 chr4A 88.060 134 11 4 1548 1677 605008633 605008765 3.310000e-33 154.0
56 TraesCS5D01G532600 chr4A 96.154 52 0 1 1502 1553 618270571 618270620 4.400000e-12 84.2
57 TraesCS5D01G532600 chr7B 93.939 231 12 2 6463 6691 531640676 531640446 1.410000e-91 348.0
58 TraesCS5D01G532600 chr7B 93.103 232 14 2 6462 6691 150070077 150069846 8.510000e-89 339.0
59 TraesCS5D01G532600 chr7B 92.157 51 3 1 303 353 494427971 494428020 3.430000e-08 71.3
60 TraesCS5D01G532600 chr6D 92.982 171 11 1 6462 6632 260032765 260032934 1.480000e-61 248.0
61 TraesCS5D01G532600 chr6D 83.902 205 27 4 6490 6692 51198436 51198636 2.520000e-44 191.0
62 TraesCS5D01G532600 chr6D 97.872 94 0 2 1549 1641 34808919 34809011 1.980000e-35 161.0
63 TraesCS5D01G532600 chr6D 94.444 54 3 0 303 356 451035760 451035707 4.400000e-12 84.2
64 TraesCS5D01G532600 chr2B 90.419 167 15 1 6462 6628 784535548 784535383 1.160000e-52 219.0
65 TraesCS5D01G532600 chr2B 90.977 133 9 2 4571 4700 209075812 209075680 7.060000e-40 176.0
66 TraesCS5D01G532600 chr2B 89.051 137 10 4 4570 4705 89499067 89498935 1.530000e-36 165.0
67 TraesCS5D01G532600 chr2B 92.929 99 7 0 1538 1636 165512936 165513034 1.990000e-30 145.0
68 TraesCS5D01G532600 chr3B 96.639 119 4 0 748 866 70295983 70295865 1.510000e-46 198.0
69 TraesCS5D01G532600 chr3B 94.488 127 6 1 743 869 658489672 658489547 1.950000e-45 195.0
70 TraesCS5D01G532600 chr3B 92.308 130 10 0 749 878 661840409 661840280 1.170000e-42 185.0
71 TraesCS5D01G532600 chr3B 93.333 105 3 4 1539 1643 710381405 710381305 1.190000e-32 152.0
72 TraesCS5D01G532600 chr3B 95.918 49 1 1 309 356 383486903 383486855 2.050000e-10 78.7
73 TraesCS5D01G532600 chr3A 93.130 131 9 0 749 879 544395410 544395540 7.010000e-45 193.0
74 TraesCS5D01G532600 chr6B 93.130 131 7 2 747 876 590564975 590565104 2.520000e-44 191.0
75 TraesCS5D01G532600 chr6B 91.803 122 9 1 4570 4690 164882916 164883037 1.180000e-37 169.0
76 TraesCS5D01G532600 chr4B 94.355 124 7 0 748 871 564869586 564869463 2.520000e-44 191.0
77 TraesCS5D01G532600 chr1D 83.902 205 27 4 6490 6692 10129013 10128813 2.520000e-44 191.0
78 TraesCS5D01G532600 chr1D 79.195 149 28 3 2520 2667 460524223 460524369 4.370000e-17 100.0
79 TraesCS5D01G532600 chr1A 94.309 123 6 1 749 871 459516789 459516910 3.260000e-43 187.0
80 TraesCS5D01G532600 chr1A 93.333 105 6 1 1545 1649 133417456 133417559 3.310000e-33 154.0
81 TraesCS5D01G532600 chr2D 92.969 128 7 2 740 866 437904062 437903936 1.170000e-42 185.0
82 TraesCS5D01G532600 chr2D 93.388 121 7 1 4570 4689 428669900 428670020 1.960000e-40 178.0
83 TraesCS5D01G532600 chr7D 92.063 126 9 1 4571 4695 4241701 4241826 7.060000e-40 176.0
84 TraesCS5D01G532600 chr2A 95.098 102 4 1 1551 1651 133985014 133985115 7.110000e-35 159.0
85 TraesCS5D01G532600 chr7A 94.949 99 4 1 1551 1649 90305019 90304922 3.310000e-33 154.0
86 TraesCS5D01G532600 chr6A 88.060 134 11 4 1548 1677 572846219 572846351 3.310000e-33 154.0
87 TraesCS5D01G532600 chr4D 91.228 114 6 4 1551 1662 469504368 469504257 1.190000e-32 152.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G532600 chr5D 547540975 547547825 6850 False 12652.000000 12652 100.000000 1 6851 1 chr5D.!!$F2 6850
1 TraesCS5D01G532600 chr5D 547707419 547715385 7966 False 404.250000 737 80.587000 358 5918 4 chr5D.!!$F3 5560
2 TraesCS5D01G532600 chr5B 691589718 691592382 2664 False 1052.500000 1519 88.423000 2278 5334 2 chr5B.!!$F7 3056
3 TraesCS5D01G532600 chr5B 691187835 691189618 1783 False 980.500000 1120 91.435000 3882 5355 2 chr5B.!!$F5 1473
4 TraesCS5D01G532600 chr5B 691179382 691182124 2742 False 955.625000 2010 93.556500 863 3887 4 chr5B.!!$F4 3024
5 TraesCS5D01G532600 chr5B 691162275 691168919 6644 False 795.470000 2579 92.588700 47 6343 10 chr5B.!!$F3 6296
6 TraesCS5D01G532600 chr5B 691508719 691521915 13196 False 749.000000 2119 93.013583 1 6364 12 chr5B.!!$F6 6363
7 TraesCS5D01G532600 chr5B 691198542 691199313 771 False 501.000000 501 79.774000 5608 6343 1 chr5B.!!$F2 735
8 TraesCS5D01G532600 chr4A 618268145 618277342 9197 False 715.836364 2420 90.352727 1 6440 11 chr4A.!!$F3 6439
9 TraesCS5D01G532600 chr4A 618285838 618287255 1417 False 441.500000 496 81.980000 5166 6415 2 chr4A.!!$F4 1249
10 TraesCS5D01G532600 chr4A 618307888 618310750 2862 True 416.000000 468 82.389000 2334 5549 2 chr4A.!!$R1 3215

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
769 4405 1.050204 TTCCCTCCGTCCGAAAAAGA 58.950 50.0 0.00 0.00 0.00 2.52 F
1207 4883 0.177141 TGTATTAGGCGGGTGCTGAC 59.823 55.0 0.00 0.00 42.25 3.51 F
2734 7798 0.392336 CTTGCCCTAGAGCAGCCTAG 59.608 60.0 0.00 9.77 45.13 3.02 F
3079 9624 1.116308 TGCCGAATGGGAACGAGATA 58.884 50.0 0.00 0.00 38.47 1.98 F
4296 13063 1.102809 TGTGCTGTTGGTGCCTTCAG 61.103 55.0 8.15 8.15 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2330 7356 1.242076 GCAACAAGCAGTCCATCTGT 58.758 50.0 0.00 0.0 45.23 3.41 R
3058 9602 0.672401 TCTCGTTCCCATTCGGCAAC 60.672 55.0 0.00 0.0 0.00 4.17 R
3776 11033 0.038744 AATCTTGTCCTGGCCCTGTG 59.961 55.0 0.00 0.0 0.00 3.66 R
4427 13451 0.040204 AGACAGGCCAAGGGAAATGG 59.960 55.0 5.01 0.0 41.08 3.16 R
6112 18664 1.999648 ACTTCATGCCAACACACCAT 58.000 45.0 0.00 0.0 0.00 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
113 114 6.815089 AGAATAGCTGTTCTCCATGAGTAAG 58.185 40.000 19.03 0.00 33.24 2.34
301 3911 7.534085 TTGTTATTCGAGTATGGCTTGTAAG 57.466 36.000 0.00 0.00 0.00 2.34
347 3971 7.241042 TCCCCTTTCCATTATAGAGATAACG 57.759 40.000 0.00 0.00 30.24 3.18
756 4392 8.753497 ATTTTGGTTCATCTTAGTATTCCCTC 57.247 34.615 0.00 0.00 0.00 4.30
757 4393 5.888982 TGGTTCATCTTAGTATTCCCTCC 57.111 43.478 0.00 0.00 0.00 4.30
760 4396 5.509332 GGTTCATCTTAGTATTCCCTCCGTC 60.509 48.000 0.00 0.00 0.00 4.79
761 4397 4.150359 TCATCTTAGTATTCCCTCCGTCC 58.850 47.826 0.00 0.00 0.00 4.79
762 4398 2.579873 TCTTAGTATTCCCTCCGTCCG 58.420 52.381 0.00 0.00 0.00 4.79
763 4399 2.173356 TCTTAGTATTCCCTCCGTCCGA 59.827 50.000 0.00 0.00 0.00 4.55
764 4400 2.734755 TAGTATTCCCTCCGTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
765 4401 1.856629 AGTATTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
767 4403 2.568509 AGTATTCCCTCCGTCCGAAAAA 59.431 45.455 0.00 0.00 0.00 1.94
768 4404 2.109425 ATTCCCTCCGTCCGAAAAAG 57.891 50.000 0.00 0.00 0.00 2.27
769 4405 1.050204 TTCCCTCCGTCCGAAAAAGA 58.950 50.000 0.00 0.00 0.00 2.52
770 4406 1.272807 TCCCTCCGTCCGAAAAAGAT 58.727 50.000 0.00 0.00 0.00 2.40
771 4407 1.626825 TCCCTCCGTCCGAAAAAGATT 59.373 47.619 0.00 0.00 0.00 2.40
772 4408 1.737793 CCCTCCGTCCGAAAAAGATTG 59.262 52.381 0.00 0.00 0.00 2.67
773 4409 2.423577 CCTCCGTCCGAAAAAGATTGT 58.576 47.619 0.00 0.00 0.00 2.71
774 4410 2.415512 CCTCCGTCCGAAAAAGATTGTC 59.584 50.000 0.00 0.00 0.00 3.18
775 4411 2.415512 CTCCGTCCGAAAAAGATTGTCC 59.584 50.000 0.00 0.00 0.00 4.02
776 4412 1.467342 CCGTCCGAAAAAGATTGTCCC 59.533 52.381 0.00 0.00 0.00 4.46
777 4413 2.423577 CGTCCGAAAAAGATTGTCCCT 58.576 47.619 0.00 0.00 0.00 4.20
778 4414 2.415512 CGTCCGAAAAAGATTGTCCCTC 59.584 50.000 0.00 0.00 0.00 4.30
779 4415 3.408634 GTCCGAAAAAGATTGTCCCTCA 58.591 45.455 0.00 0.00 0.00 3.86
780 4416 3.818773 GTCCGAAAAAGATTGTCCCTCAA 59.181 43.478 0.00 0.00 40.53 3.02
781 4417 4.277423 GTCCGAAAAAGATTGTCCCTCAAA 59.723 41.667 0.00 0.00 39.62 2.69
782 4418 5.048013 GTCCGAAAAAGATTGTCCCTCAAAT 60.048 40.000 0.00 0.00 39.62 2.32
783 4419 5.048083 TCCGAAAAAGATTGTCCCTCAAATG 60.048 40.000 0.00 0.00 39.62 2.32
784 4420 5.163513 CGAAAAAGATTGTCCCTCAAATGG 58.836 41.667 0.00 0.00 39.62 3.16
785 4421 5.048083 CGAAAAAGATTGTCCCTCAAATGGA 60.048 40.000 0.00 0.00 39.62 3.41
786 4422 6.350445 CGAAAAAGATTGTCCCTCAAATGGAT 60.350 38.462 0.00 0.00 39.62 3.41
787 4423 5.927281 AAAGATTGTCCCTCAAATGGATG 57.073 39.130 0.00 0.00 39.62 3.51
788 4424 4.598036 AGATTGTCCCTCAAATGGATGT 57.402 40.909 0.00 0.00 39.62 3.06
789 4425 5.715439 AGATTGTCCCTCAAATGGATGTA 57.285 39.130 0.00 0.00 39.62 2.29
790 4426 6.271585 AGATTGTCCCTCAAATGGATGTAT 57.728 37.500 0.00 0.00 39.62 2.29
791 4427 6.302269 AGATTGTCCCTCAAATGGATGTATC 58.698 40.000 0.00 0.00 39.62 2.24
792 4428 5.715439 TTGTCCCTCAAATGGATGTATCT 57.285 39.130 0.00 0.00 33.65 1.98
793 4429 6.823286 TTGTCCCTCAAATGGATGTATCTA 57.177 37.500 0.00 0.00 33.65 1.98
794 4430 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
795 4431 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
796 4432 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
797 4433 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
798 4434 4.999950 CCTCAAATGGATGTATCTAGCACC 59.000 45.833 0.00 0.00 0.00 5.01
799 4435 5.455183 CCTCAAATGGATGTATCTAGCACCA 60.455 44.000 0.00 0.00 0.00 4.17
800 4436 6.000246 TCAAATGGATGTATCTAGCACCAA 58.000 37.500 0.00 0.00 0.00 3.67
801 4437 6.057533 TCAAATGGATGTATCTAGCACCAAG 58.942 40.000 0.00 0.00 0.00 3.61
802 4438 5.636903 AATGGATGTATCTAGCACCAAGT 57.363 39.130 0.00 0.00 0.00 3.16
803 4439 5.636903 ATGGATGTATCTAGCACCAAGTT 57.363 39.130 0.00 0.00 0.00 2.66
804 4440 6.747414 ATGGATGTATCTAGCACCAAGTTA 57.253 37.500 0.00 0.00 0.00 2.24
805 4441 6.161855 TGGATGTATCTAGCACCAAGTTAG 57.838 41.667 0.00 0.00 32.79 2.34
806 4442 5.661312 TGGATGTATCTAGCACCAAGTTAGT 59.339 40.000 0.00 0.00 33.25 2.24
807 4443 5.986135 GGATGTATCTAGCACCAAGTTAGTG 59.014 44.000 0.00 0.00 38.30 2.74
819 4455 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
820 4456 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
821 4457 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
822 4458 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
823 4459 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
824 4460 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
825 4461 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
826 4462 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
827 4463 6.737720 AGTGCTAGATACATCCATTTGAGA 57.262 37.500 0.00 0.00 0.00 3.27
880 4516 5.353400 GGAGGGAGTACCATTTAACTTTTCG 59.647 44.000 0.00 0.00 43.89 3.46
906 4548 6.378848 GCCATAAGTTTTATTTGGGACTGGTA 59.621 38.462 0.00 0.00 0.00 3.25
941 4586 2.443887 ATTTTCGCAACATGCTTGCT 57.556 40.000 22.12 8.00 42.25 3.91
1207 4883 0.177141 TGTATTAGGCGGGTGCTGAC 59.823 55.000 0.00 0.00 42.25 3.51
1356 5114 1.832883 TGTTTGTGCTGTTGGTGTCT 58.167 45.000 0.00 0.00 0.00 3.41
1469 5227 0.517316 GCAACAGGAATGTCACCGTC 59.483 55.000 0.00 0.00 0.00 4.79
1550 6383 9.726232 CACATATGTTGAAAGGTTGATCTTATG 57.274 33.333 5.37 0.00 0.00 1.90
1551 6384 9.466497 ACATATGTTGAAAGGTTGATCTTATGT 57.534 29.630 1.41 0.00 0.00 2.29
1555 6388 8.547967 TGTTGAAAGGTTGATCTTATGTACTC 57.452 34.615 0.00 0.00 0.00 2.59
1556 6389 7.606456 TGTTGAAAGGTTGATCTTATGTACTCC 59.394 37.037 0.00 0.00 0.00 3.85
1557 6390 6.650120 TGAAAGGTTGATCTTATGTACTCCC 58.350 40.000 0.00 0.00 0.00 4.30
1558 6391 6.443849 TGAAAGGTTGATCTTATGTACTCCCT 59.556 38.462 0.00 0.00 0.00 4.20
1559 6392 6.487299 AAGGTTGATCTTATGTACTCCCTC 57.513 41.667 0.00 0.00 0.00 4.30
1560 6393 4.902448 AGGTTGATCTTATGTACTCCCTCC 59.098 45.833 0.00 0.00 0.00 4.30
1561 6394 4.262079 GGTTGATCTTATGTACTCCCTCCG 60.262 50.000 0.00 0.00 0.00 4.63
1562 6395 4.180377 TGATCTTATGTACTCCCTCCGT 57.820 45.455 0.00 0.00 0.00 4.69
1563 6396 5.314718 TGATCTTATGTACTCCCTCCGTA 57.685 43.478 0.00 0.00 0.00 4.02
1564 6397 5.698104 TGATCTTATGTACTCCCTCCGTAA 58.302 41.667 0.00 0.00 0.00 3.18
1565 6398 6.131264 TGATCTTATGTACTCCCTCCGTAAA 58.869 40.000 0.00 0.00 0.00 2.01
1566 6399 5.841957 TCTTATGTACTCCCTCCGTAAAC 57.158 43.478 0.00 0.00 0.00 2.01
1567 6400 5.513233 TCTTATGTACTCCCTCCGTAAACT 58.487 41.667 0.00 0.00 0.00 2.66
1568 6401 6.662755 TCTTATGTACTCCCTCCGTAAACTA 58.337 40.000 0.00 0.00 0.00 2.24
1569 6402 7.118723 TCTTATGTACTCCCTCCGTAAACTAA 58.881 38.462 0.00 0.00 0.00 2.24
1570 6403 7.781693 TCTTATGTACTCCCTCCGTAAACTAAT 59.218 37.037 0.00 0.00 0.00 1.73
1571 6404 8.995027 TTATGTACTCCCTCCGTAAACTAATA 57.005 34.615 0.00 0.00 0.00 0.98
1572 6405 9.592196 TTATGTACTCCCTCCGTAAACTAATAT 57.408 33.333 0.00 0.00 0.00 1.28
1574 6407 8.995027 TGTACTCCCTCCGTAAACTAATATAA 57.005 34.615 0.00 0.00 0.00 0.98
1575 6408 9.071276 TGTACTCCCTCCGTAAACTAATATAAG 57.929 37.037 0.00 0.00 0.00 1.73
1576 6409 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
1577 6410 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
1578 6411 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
1579 6412 6.779049 TCCCTCCGTAAACTAATATAAGAGCA 59.221 38.462 0.00 0.00 0.00 4.26
1580 6413 7.453752 TCCCTCCGTAAACTAATATAAGAGCAT 59.546 37.037 0.00 0.00 0.00 3.79
1581 6414 8.095169 CCCTCCGTAAACTAATATAAGAGCATT 58.905 37.037 0.00 0.00 0.00 3.56
1582 6415 9.490379 CCTCCGTAAACTAATATAAGAGCATTT 57.510 33.333 0.00 0.00 0.00 2.32
1609 6442 9.733219 AGATCACTACTTTAGTAATCTAAACGC 57.267 33.333 0.00 0.00 40.05 4.84
1610 6443 9.733219 GATCACTACTTTAGTAATCTAAACGCT 57.267 33.333 0.00 0.00 40.05 5.07
1611 6444 9.733219 ATCACTACTTTAGTAATCTAAACGCTC 57.267 33.333 0.00 0.00 40.05 5.03
1612 6445 8.954350 TCACTACTTTAGTAATCTAAACGCTCT 58.046 33.333 0.00 0.00 40.05 4.09
1613 6446 9.570488 CACTACTTTAGTAATCTAAACGCTCTT 57.430 33.333 0.00 0.00 40.05 2.85
1630 6463 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
1631 6464 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
1632 6465 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
1764 6599 1.078497 CCGGCTGCAATGTAGGTCA 60.078 57.895 0.50 0.00 0.00 4.02
1959 6897 7.061752 ACAGCAAAATAGATTGTCTCGTAAC 57.938 36.000 0.00 0.00 32.80 2.50
2105 7069 9.855021 ACCACTAAATTTCTATTGTAATGCAAC 57.145 29.630 0.00 0.00 40.28 4.17
2269 7252 4.026744 TGATGACCAGAGGAAGTAGAAGG 58.973 47.826 0.00 0.00 0.00 3.46
2321 7335 4.937015 AGCTTTGTGTTCTTTGCAATGTTT 59.063 33.333 11.67 0.00 0.00 2.83
2330 7356 8.324567 GTGTTCTTTGCAATGTTTAATTTTCGA 58.675 29.630 11.67 0.00 0.00 3.71
2418 7461 2.236395 CGACTGGATTTACTGGGGAAGT 59.764 50.000 0.00 0.00 43.40 3.01
2423 7466 4.918588 TGGATTTACTGGGGAAGTCTTTC 58.081 43.478 0.00 0.00 40.56 2.62
2517 7569 7.067008 TGTCTTTGCTTTATATTAACAGGGAGC 59.933 37.037 0.00 0.00 0.00 4.70
2594 7646 3.124636 CCTTTTTCCGGTAACATCTCGTG 59.875 47.826 0.00 0.00 0.00 4.35
2626 7678 2.698803 CGTGATTGGAGTGTTGATGGA 58.301 47.619 0.00 0.00 0.00 3.41
2734 7798 0.392336 CTTGCCCTAGAGCAGCCTAG 59.608 60.000 0.00 9.77 45.13 3.02
2805 7871 6.060788 AGAATCTTCAATGCATCCCTAACTC 58.939 40.000 0.00 0.00 0.00 3.01
2975 9307 9.907229 TTTGTTATTACCCATTTGAAAGGTTTT 57.093 25.926 0.00 0.00 35.02 2.43
3009 9553 9.897744 TGACACATCAAGACATTTATTTTCTTC 57.102 29.630 0.00 0.00 0.00 2.87
3020 9564 9.411801 GACATTTATTTTCTTCTTTCTGGAACC 57.588 33.333 0.00 0.00 0.00 3.62
3027 9571 7.601705 TTTCTTCTTTCTGGAACCAAATCAT 57.398 32.000 0.00 0.00 0.00 2.45
3031 9575 7.452501 TCTTCTTTCTGGAACCAAATCATTCAT 59.547 33.333 0.00 0.00 0.00 2.57
3033 9577 5.920193 TTCTGGAACCAAATCATTCATCC 57.080 39.130 0.00 0.00 0.00 3.51
3058 9602 7.904977 CCGTATTGATCGCATTATGGATAAAAG 59.095 37.037 0.00 0.00 38.45 2.27
3069 9614 4.654091 ATGGATAAAAGTTGCCGAATGG 57.346 40.909 0.00 0.00 38.77 3.16
3079 9624 1.116308 TGCCGAATGGGAACGAGATA 58.884 50.000 0.00 0.00 38.47 1.98
3107 9653 7.227910 GGTGTCAAATGTTTGTCTTCCTAACTA 59.772 37.037 5.48 0.00 39.18 2.24
3112 9658 8.507249 CAAATGTTTGTCTTCCTAACTAGAAGG 58.493 37.037 0.00 2.93 40.94 3.46
3113 9659 6.989155 TGTTTGTCTTCCTAACTAGAAGGA 57.011 37.500 12.72 12.72 40.94 3.36
3117 9663 5.838955 TGTCTTCCTAACTAGAAGGATCCA 58.161 41.667 15.82 11.40 42.69 3.41
3125 9671 7.037586 TCCTAACTAGAAGGATCCATGTGTTTT 60.038 37.037 15.82 0.00 38.24 2.43
3126 9672 7.281100 CCTAACTAGAAGGATCCATGTGTTTTC 59.719 40.741 15.82 7.03 36.08 2.29
3201 9747 7.798596 AACATATGCTCTAAGGATCACTTTG 57.201 36.000 1.58 0.00 40.64 2.77
3202 9748 7.129457 ACATATGCTCTAAGGATCACTTTGA 57.871 36.000 1.58 1.97 40.64 2.69
3203 9749 7.743749 ACATATGCTCTAAGGATCACTTTGAT 58.256 34.615 1.58 0.00 39.58 2.57
3205 9751 9.149225 CATATGCTCTAAGGATCACTTTGATAC 57.851 37.037 0.00 0.00 39.58 2.24
3217 9766 7.814587 GGATCACTTTGATACTTTTCTTTTGGG 59.185 37.037 0.00 0.00 37.20 4.12
3264 9953 4.934001 TCAGTTTGCATGATCTTCTGAGTC 59.066 41.667 0.00 0.00 0.00 3.36
3403 10092 9.755122 TGGTATGTGTTCTACTATATATGCTCT 57.245 33.333 0.00 0.00 0.00 4.09
3421 10281 4.022068 TGCTCTTTTACCAGCTCCAAATTG 60.022 41.667 0.00 0.00 36.53 2.32
3482 10621 8.684386 TTGTGGTTTATGAACTAGTTGAATGA 57.316 30.769 14.14 0.64 36.03 2.57
3514 10653 5.815233 TTTTGCATCCCCTGTAAAAATCA 57.185 34.783 0.00 0.00 43.57 2.57
3685 10869 1.683365 GCAAGGGTGGTGCATGGAT 60.683 57.895 0.00 0.00 41.80 3.41
3696 10880 4.869861 GTGGTGCATGGATTTGTTATTTCC 59.130 41.667 0.00 0.00 0.00 3.13
3776 11033 3.549423 GGGTACACTTGCGAAAGGTTTTC 60.549 47.826 8.33 0.00 0.00 2.29
3836 11100 3.519107 TGAGGAGCATGACATAGTTCCAA 59.481 43.478 16.92 7.34 37.57 3.53
3844 11108 2.983192 TGACATAGTTCCAAGTTCCCCA 59.017 45.455 0.00 0.00 0.00 4.96
3851 11124 1.444933 TCCAAGTTCCCCATGACTGT 58.555 50.000 0.00 0.00 0.00 3.55
3852 11125 1.780309 TCCAAGTTCCCCATGACTGTT 59.220 47.619 0.00 0.00 0.00 3.16
3926 11200 3.832490 TCTCAAGCTACACCTTCTTGCTA 59.168 43.478 0.00 0.00 37.64 3.49
4146 11422 8.154649 TGTTTCATCTCTTAAAGGTTGACTTC 57.845 34.615 0.00 0.00 38.85 3.01
4147 11423 7.993183 TGTTTCATCTCTTAAAGGTTGACTTCT 59.007 33.333 0.00 0.00 38.85 2.85
4148 11424 8.499967 GTTTCATCTCTTAAAGGTTGACTTCTC 58.500 37.037 0.00 0.00 38.85 2.87
4149 11425 7.546250 TCATCTCTTAAAGGTTGACTTCTCT 57.454 36.000 0.00 0.00 38.85 3.10
4150 11426 7.967908 TCATCTCTTAAAGGTTGACTTCTCTT 58.032 34.615 0.00 0.00 38.85 2.85
4151 11427 9.090103 TCATCTCTTAAAGGTTGACTTCTCTTA 57.910 33.333 0.00 0.00 38.85 2.10
4152 11428 9.712305 CATCTCTTAAAGGTTGACTTCTCTTAA 57.288 33.333 0.00 0.00 38.85 1.85
4154 11430 9.765795 TCTCTTAAAGGTTGACTTCTCTTAAAG 57.234 33.333 0.00 0.00 38.85 1.85
4155 11431 8.904099 TCTTAAAGGTTGACTTCTCTTAAAGG 57.096 34.615 0.00 0.00 38.85 3.11
4156 11432 8.491958 TCTTAAAGGTTGACTTCTCTTAAAGGT 58.508 33.333 0.00 0.00 38.85 3.50
4157 11433 9.121658 CTTAAAGGTTGACTTCTCTTAAAGGTT 57.878 33.333 0.00 0.00 38.85 3.50
4158 11434 6.944234 AAGGTTGACTTCTCTTAAAGGTTG 57.056 37.500 0.00 0.00 32.85 3.77
4159 11435 6.248569 AGGTTGACTTCTCTTAAAGGTTGA 57.751 37.500 0.00 0.00 0.00 3.18
4160 11436 6.056236 AGGTTGACTTCTCTTAAAGGTTGAC 58.944 40.000 0.00 0.00 0.00 3.18
4161 11437 6.056236 GGTTGACTTCTCTTAAAGGTTGACT 58.944 40.000 0.00 0.00 0.00 3.41
4162 11438 6.542735 GGTTGACTTCTCTTAAAGGTTGACTT 59.457 38.462 0.00 0.00 42.52 3.01
4296 13063 1.102809 TGTGCTGTTGGTGCCTTCAG 61.103 55.000 8.15 8.15 0.00 3.02
4354 13239 6.865205 CCTTTGTTTCAGAACATTTCTCCATC 59.135 38.462 0.00 0.00 44.71 3.51
4402 13407 2.992124 TTCACCGAAAACAGTCTGGA 57.008 45.000 4.53 0.00 0.00 3.86
4429 13453 9.647918 AGATCTCTAGTTATGACAGTATTTCCA 57.352 33.333 0.00 0.00 0.00 3.53
4455 13479 1.071385 CTTGGCCTGTCTCTGTGACTT 59.929 52.381 3.32 0.00 45.54 3.01
4561 13614 3.882888 TGCTTTGGACAAAACTAGTGGAG 59.117 43.478 0.00 0.00 0.00 3.86
4595 13648 2.280628 CCTCCGTCTGGAATTACTTGC 58.719 52.381 0.00 0.00 45.87 4.01
4598 13651 1.674817 CCGTCTGGAATTACTTGCCGT 60.675 52.381 0.00 0.00 37.49 5.68
4659 13712 8.871629 ATACGTCTAGATACATCCATTTCTCT 57.128 34.615 0.00 0.00 0.00 3.10
4710 13763 2.027745 ACATAGCACCAAGTCAGACTGG 60.028 50.000 3.05 10.31 0.00 4.00
4721 13774 3.030291 AGTCAGACTGGATGATCCACTC 58.970 50.000 10.75 11.33 42.67 3.51
4722 13775 2.762887 GTCAGACTGGATGATCCACTCA 59.237 50.000 19.02 0.00 42.67 3.41
4951 14982 5.290493 AGTGACAGTTTCCAGTGTGATTA 57.710 39.130 0.00 0.00 36.63 1.75
5176 15210 1.669779 CAGCTAATCCTTCTGCTGTGC 59.330 52.381 0.00 0.00 45.31 4.57
5277 15314 0.679505 TCTGAAGTTGGACCCGACAG 59.320 55.000 8.99 0.00 32.91 3.51
5307 15344 6.821160 TGAGATTGAGAACGCATTATGGTAAA 59.179 34.615 0.00 0.00 0.00 2.01
5343 15390 5.185056 TCTCTGTGTCTATCAATGTCGGAAA 59.815 40.000 0.00 0.00 0.00 3.13
5347 15394 7.390440 TCTGTGTCTATCAATGTCGGAAATTTT 59.610 33.333 0.00 0.00 0.00 1.82
5348 15395 8.554835 TGTGTCTATCAATGTCGGAAATTTTA 57.445 30.769 0.00 0.00 0.00 1.52
5349 15396 9.004717 TGTGTCTATCAATGTCGGAAATTTTAA 57.995 29.630 0.00 0.00 0.00 1.52
5374 15421 4.487714 AAGCATAAATCTCACTCGGGAA 57.512 40.909 0.00 0.00 0.00 3.97
5407 15458 8.253810 ACCGTGTCATGATAAATCATATAGAGG 58.746 37.037 0.00 8.95 45.23 3.69
5408 15459 7.223582 CCGTGTCATGATAAATCATATAGAGGC 59.776 40.741 0.00 0.00 45.23 4.70
5688 18145 1.632409 ACCATGTTGATGTCCTCAGCT 59.368 47.619 0.00 0.00 36.17 4.24
5699 18156 9.015367 GTTGATGTCCTCAGCTACTTATATCTA 57.985 37.037 0.00 0.00 34.16 1.98
5729 18209 9.803507 TCAGATGGAGCATATGATTTTTATCTT 57.196 29.630 6.97 0.00 37.20 2.40
5913 18412 1.322442 GTTTCTGTGCTTGCTTCCCT 58.678 50.000 0.00 0.00 0.00 4.20
5983 18522 7.414098 GCTTCTTTGTATATAGTGTGTTGGGTG 60.414 40.741 0.00 0.00 0.00 4.61
6050 18601 7.608153 TGATCGTAAGTTTGAATCCTTAGACA 58.392 34.615 0.00 0.00 39.48 3.41
6051 18602 8.258007 TGATCGTAAGTTTGAATCCTTAGACAT 58.742 33.333 0.00 0.00 39.48 3.06
6053 18604 7.383687 TCGTAAGTTTGAATCCTTAGACATGT 58.616 34.615 0.00 0.00 39.48 3.21
6102 18654 4.795962 GCCAAAATGCGGGAATTATGTAGG 60.796 45.833 0.00 0.00 0.00 3.18
6136 18726 2.297033 GTGTGTTGGCATGAAGTTGGAT 59.703 45.455 0.00 0.00 0.00 3.41
6142 18732 3.772387 TGGCATGAAGTTGGATGGTTTA 58.228 40.909 0.00 0.00 0.00 2.01
6144 18734 4.776837 TGGCATGAAGTTGGATGGTTTAAT 59.223 37.500 0.00 0.00 0.00 1.40
6174 18764 5.964958 TTGGAGATGTCTTGAATTTGGAC 57.035 39.130 0.00 0.00 0.00 4.02
6175 18765 4.984295 TGGAGATGTCTTGAATTTGGACA 58.016 39.130 10.09 10.09 42.85 4.02
6182 18815 8.423349 AGATGTCTTGAATTTGGACATTTTCAA 58.577 29.630 16.96 8.77 46.48 2.69
6183 18816 9.211485 GATGTCTTGAATTTGGACATTTTCAAT 57.789 29.630 16.96 1.97 46.48 2.57
6188 18821 9.872757 CTTGAATTTGGACATTTTCAATTTCTG 57.127 29.630 8.32 0.83 37.43 3.02
6189 18822 7.863666 TGAATTTGGACATTTTCAATTTCTGC 58.136 30.769 8.32 0.00 35.76 4.26
6245 18879 7.503566 TCGTAGCTAGTATGTTGGTTACCTTAT 59.496 37.037 2.07 0.00 0.00 1.73
6246 18880 8.139989 CGTAGCTAGTATGTTGGTTACCTTATT 58.860 37.037 2.07 0.00 0.00 1.40
6420 20483 4.739046 CTTGCAAAGGTCACTAGAACAG 57.261 45.455 0.00 0.00 41.27 3.16
6445 20508 2.259204 CGCATTGGGGCACAGTTG 59.741 61.111 0.00 0.00 0.00 3.16
6454 20517 3.181367 GCACAGTTGCGGAGGATG 58.819 61.111 0.00 0.00 39.50 3.51
6455 20518 1.375908 GCACAGTTGCGGAGGATGA 60.376 57.895 0.00 0.00 39.50 2.92
6456 20519 0.745845 GCACAGTTGCGGAGGATGAT 60.746 55.000 0.00 0.00 39.50 2.45
6457 20520 1.742761 CACAGTTGCGGAGGATGATT 58.257 50.000 0.00 0.00 0.00 2.57
6458 20521 2.086869 CACAGTTGCGGAGGATGATTT 58.913 47.619 0.00 0.00 0.00 2.17
6459 20522 2.489329 CACAGTTGCGGAGGATGATTTT 59.511 45.455 0.00 0.00 0.00 1.82
6460 20523 3.057315 CACAGTTGCGGAGGATGATTTTT 60.057 43.478 0.00 0.00 0.00 1.94
6483 20546 7.862512 TTTTTAAGGTGGTTCGAACTCTAAA 57.137 32.000 26.32 17.79 0.00 1.85
6484 20547 7.486802 TTTTAAGGTGGTTCGAACTCTAAAG 57.513 36.000 26.32 0.00 0.00 1.85
6485 20548 3.041508 AGGTGGTTCGAACTCTAAAGC 57.958 47.619 26.32 15.90 0.00 3.51
6486 20549 2.074576 GGTGGTTCGAACTCTAAAGCC 58.925 52.381 26.32 14.06 0.00 4.35
6487 20550 1.725164 GTGGTTCGAACTCTAAAGCCG 59.275 52.381 26.32 0.00 0.00 5.52
6488 20551 1.614903 TGGTTCGAACTCTAAAGCCGA 59.385 47.619 26.32 0.00 31.69 5.54
6489 20552 2.036217 TGGTTCGAACTCTAAAGCCGAA 59.964 45.455 26.32 0.00 38.04 4.30
6490 20553 3.259902 GGTTCGAACTCTAAAGCCGAAT 58.740 45.455 26.32 0.00 40.51 3.34
6491 20554 4.082081 TGGTTCGAACTCTAAAGCCGAATA 60.082 41.667 26.32 0.00 40.51 1.75
6492 20555 4.866486 GGTTCGAACTCTAAAGCCGAATAA 59.134 41.667 26.32 0.00 40.51 1.40
6493 20556 5.349543 GGTTCGAACTCTAAAGCCGAATAAA 59.650 40.000 26.32 0.00 40.51 1.40
6494 20557 6.036844 GGTTCGAACTCTAAAGCCGAATAAAT 59.963 38.462 26.32 0.00 40.51 1.40
6495 20558 6.583912 TCGAACTCTAAAGCCGAATAAATG 57.416 37.500 0.00 0.00 30.96 2.32
6496 20559 6.334989 TCGAACTCTAAAGCCGAATAAATGA 58.665 36.000 0.00 0.00 30.96 2.57
6497 20560 6.984474 TCGAACTCTAAAGCCGAATAAATGAT 59.016 34.615 0.00 0.00 30.96 2.45
6498 20561 7.042725 TCGAACTCTAAAGCCGAATAAATGATG 60.043 37.037 0.00 0.00 30.96 3.07
6499 20562 7.254455 CGAACTCTAAAGCCGAATAAATGATGT 60.254 37.037 0.00 0.00 0.00 3.06
6500 20563 7.251704 ACTCTAAAGCCGAATAAATGATGTG 57.748 36.000 0.00 0.00 0.00 3.21
6501 20564 7.047891 ACTCTAAAGCCGAATAAATGATGTGA 58.952 34.615 0.00 0.00 0.00 3.58
6502 20565 7.716998 ACTCTAAAGCCGAATAAATGATGTGAT 59.283 33.333 0.00 0.00 0.00 3.06
6503 20566 7.864686 TCTAAAGCCGAATAAATGATGTGATG 58.135 34.615 0.00 0.00 0.00 3.07
6504 20567 4.494350 AGCCGAATAAATGATGTGATGC 57.506 40.909 0.00 0.00 0.00 3.91
6505 20568 3.884693 AGCCGAATAAATGATGTGATGCA 59.115 39.130 0.00 0.00 0.00 3.96
6506 20569 4.338964 AGCCGAATAAATGATGTGATGCAA 59.661 37.500 0.00 0.00 0.00 4.08
6507 20570 5.010314 AGCCGAATAAATGATGTGATGCAAT 59.990 36.000 0.00 0.00 0.00 3.56
6508 20571 6.207221 AGCCGAATAAATGATGTGATGCAATA 59.793 34.615 0.00 0.00 0.00 1.90
6509 20572 7.031372 GCCGAATAAATGATGTGATGCAATAT 58.969 34.615 0.00 0.00 0.00 1.28
6510 20573 7.219535 GCCGAATAAATGATGTGATGCAATATC 59.780 37.037 0.00 0.00 0.00 1.63
6511 20574 8.238631 CCGAATAAATGATGTGATGCAATATCA 58.761 33.333 0.00 0.00 34.42 2.15
6512 20575 9.615295 CGAATAAATGATGTGATGCAATATCAA 57.385 29.630 2.44 0.00 33.71 2.57
6518 20581 8.981724 ATGATGTGATGCAATATCAAAATAGC 57.018 30.769 2.44 0.00 33.71 2.97
6519 20582 8.173542 TGATGTGATGCAATATCAAAATAGCT 57.826 30.769 0.00 0.00 0.00 3.32
6520 20583 8.635328 TGATGTGATGCAATATCAAAATAGCTT 58.365 29.630 0.00 0.00 0.00 3.74
6521 20584 9.472361 GATGTGATGCAATATCAAAATAGCTTT 57.528 29.630 0.00 0.00 0.00 3.51
6522 20585 9.826574 ATGTGATGCAATATCAAAATAGCTTTT 57.173 25.926 0.00 0.00 34.90 2.27
6525 20588 9.449550 TGATGCAATATCAAAATAGCTTTTACG 57.550 29.630 0.00 0.00 32.81 3.18
6526 20589 7.678194 TGCAATATCAAAATAGCTTTTACGC 57.322 32.000 0.00 0.00 32.81 4.42
6527 20590 7.254137 TGCAATATCAAAATAGCTTTTACGCA 58.746 30.769 0.00 0.00 32.81 5.24
6528 20591 7.757173 TGCAATATCAAAATAGCTTTTACGCAA 59.243 29.630 0.00 0.00 32.81 4.85
6529 20592 8.755018 GCAATATCAAAATAGCTTTTACGCAAT 58.245 29.630 0.00 0.00 32.81 3.56
6537 20600 8.782533 AAATAGCTTTTACGCAATAATAGTGC 57.217 30.769 2.23 2.23 38.68 4.40
6538 20601 5.811399 AGCTTTTACGCAATAATAGTGCA 57.189 34.783 13.20 0.00 42.33 4.57
6539 20602 5.569413 AGCTTTTACGCAATAATAGTGCAC 58.431 37.500 9.40 9.40 42.33 4.57
6540 20603 5.354234 AGCTTTTACGCAATAATAGTGCACT 59.646 36.000 25.12 25.12 42.33 4.40
6541 20604 5.677178 GCTTTTACGCAATAATAGTGCACTC 59.323 40.000 25.56 5.96 42.33 3.51
6542 20605 6.674519 GCTTTTACGCAATAATAGTGCACTCA 60.675 38.462 25.56 10.54 42.33 3.41
6543 20606 5.712217 TTACGCAATAATAGTGCACTCAC 57.288 39.130 25.56 5.17 42.33 3.51
6544 20607 3.595173 ACGCAATAATAGTGCACTCACA 58.405 40.909 25.56 6.42 45.49 3.58
6545 20608 4.000325 ACGCAATAATAGTGCACTCACAA 59.000 39.130 25.56 5.97 45.49 3.33
6546 20609 4.635765 ACGCAATAATAGTGCACTCACAAT 59.364 37.500 25.56 8.52 45.49 2.71
6547 20610 5.123820 ACGCAATAATAGTGCACTCACAATT 59.876 36.000 25.56 19.19 45.49 2.32
6548 20611 6.029607 CGCAATAATAGTGCACTCACAATTT 58.970 36.000 25.56 10.85 45.49 1.82
6549 20612 6.527722 CGCAATAATAGTGCACTCACAATTTT 59.472 34.615 25.56 9.75 45.49 1.82
6550 20613 7.696035 CGCAATAATAGTGCACTCACAATTTTA 59.304 33.333 25.56 10.95 45.49 1.52
6551 20614 8.798153 GCAATAATAGTGCACTCACAATTTTAC 58.202 33.333 25.56 5.40 45.49 2.01
6552 20615 8.998989 CAATAATAGTGCACTCACAATTTTACG 58.001 33.333 25.56 4.45 45.49 3.18
6553 20616 6.554334 AATAGTGCACTCACAATTTTACGT 57.446 33.333 25.56 0.00 45.49 3.57
6554 20617 4.209452 AGTGCACTCACAATTTTACGTG 57.791 40.909 15.25 0.00 45.49 4.49
6555 20618 3.874543 AGTGCACTCACAATTTTACGTGA 59.125 39.130 15.25 0.00 45.49 4.35
6556 20619 4.515191 AGTGCACTCACAATTTTACGTGAT 59.485 37.500 15.25 0.00 45.49 3.06
6557 20620 5.008613 AGTGCACTCACAATTTTACGTGATT 59.991 36.000 15.25 0.00 45.49 2.57
6558 20621 5.685511 GTGCACTCACAATTTTACGTGATTT 59.314 36.000 10.32 0.00 41.13 2.17
6559 20622 6.198216 GTGCACTCACAATTTTACGTGATTTT 59.802 34.615 10.32 0.00 41.13 1.82
6560 20623 7.377397 GTGCACTCACAATTTTACGTGATTTTA 59.623 33.333 10.32 0.00 41.13 1.52
6561 20624 7.915923 TGCACTCACAATTTTACGTGATTTTAA 59.084 29.630 0.00 0.00 41.13 1.52
6562 20625 8.747666 GCACTCACAATTTTACGTGATTTTAAA 58.252 29.630 0.00 0.00 41.13 1.52
6605 20668 9.101655 AGAAATGCAAGCATATTTGAATAAACC 57.898 29.630 8.12 0.00 35.31 3.27
6606 20669 9.101655 GAAATGCAAGCATATTTGAATAAACCT 57.898 29.630 8.12 0.00 35.31 3.50
6607 20670 8.428186 AATGCAAGCATATTTGAATAAACCTG 57.572 30.769 8.12 0.00 35.31 4.00
6608 20671 7.167924 TGCAAGCATATTTGAATAAACCTGA 57.832 32.000 0.00 0.00 0.00 3.86
6609 20672 7.609960 TGCAAGCATATTTGAATAAACCTGAA 58.390 30.769 0.00 0.00 0.00 3.02
6610 20673 8.093307 TGCAAGCATATTTGAATAAACCTGAAA 58.907 29.630 0.00 0.00 0.00 2.69
6611 20674 8.934825 GCAAGCATATTTGAATAAACCTGAAAA 58.065 29.630 0.00 0.00 0.00 2.29
6613 20676 9.995003 AAGCATATTTGAATAAACCTGAAAACA 57.005 25.926 0.00 0.00 0.00 2.83
6628 20691 7.945134 ACCTGAAAACATATGGATAATGAAGC 58.055 34.615 7.80 0.00 0.00 3.86
6629 20692 7.781693 ACCTGAAAACATATGGATAATGAAGCT 59.218 33.333 7.80 0.00 0.00 3.74
6630 20693 8.636213 CCTGAAAACATATGGATAATGAAGCTT 58.364 33.333 7.80 0.00 0.00 3.74
6636 20699 9.918630 AACATATGGATAATGAAGCTTTAATGC 57.081 29.630 7.80 5.22 0.00 3.56
6637 20700 9.305555 ACATATGGATAATGAAGCTTTAATGCT 57.694 29.630 9.92 9.92 46.40 3.79
6641 20704 8.922931 TGGATAATGAAGCTTTAATGCTATCA 57.077 30.769 15.51 18.34 43.24 2.15
6642 20705 9.353431 TGGATAATGAAGCTTTAATGCTATCAA 57.647 29.630 15.51 6.24 43.24 2.57
6648 20711 9.745880 ATGAAGCTTTAATGCTATCAAAGATTG 57.254 29.630 15.51 0.00 43.24 2.67
6649 20712 7.703621 TGAAGCTTTAATGCTATCAAAGATTGC 59.296 33.333 15.51 6.50 43.24 3.56
6650 20713 6.204359 AGCTTTAATGCTATCAAAGATTGCG 58.796 36.000 13.78 0.00 42.10 4.85
6651 20714 6.038603 AGCTTTAATGCTATCAAAGATTGCGA 59.961 34.615 13.78 0.49 42.10 5.10
6652 20715 6.692681 GCTTTAATGCTATCAAAGATTGCGAA 59.307 34.615 6.10 1.77 32.20 4.70
6653 20716 7.096722 GCTTTAATGCTATCAAAGATTGCGAAG 60.097 37.037 6.10 9.81 32.20 3.79
6654 20717 7.096722 CTTTAATGCTATCAAAGATTGCGAAGC 60.097 37.037 8.44 1.54 41.99 3.86
6673 20736 6.658831 CGAAGCTGTTCTCAGAAAATTTACA 58.341 36.000 0.00 0.00 43.76 2.41
6674 20737 7.301054 CGAAGCTGTTCTCAGAAAATTTACAT 58.699 34.615 0.00 0.00 43.76 2.29
6675 20738 7.479916 CGAAGCTGTTCTCAGAAAATTTACATC 59.520 37.037 0.00 0.00 43.76 3.06
6676 20739 7.750229 AGCTGTTCTCAGAAAATTTACATCA 57.250 32.000 0.00 0.00 43.76 3.07
6677 20740 8.345724 AGCTGTTCTCAGAAAATTTACATCAT 57.654 30.769 0.00 0.00 43.76 2.45
6678 20741 9.453572 AGCTGTTCTCAGAAAATTTACATCATA 57.546 29.630 0.00 0.00 43.76 2.15
6696 20759 8.296211 ACATCATAAATTCACAACATGGATCA 57.704 30.769 0.00 0.00 0.00 2.92
6697 20760 8.192774 ACATCATAAATTCACAACATGGATCAC 58.807 33.333 0.00 0.00 0.00 3.06
6698 20761 7.943079 TCATAAATTCACAACATGGATCACT 57.057 32.000 0.00 0.00 0.00 3.41
6699 20762 7.988737 TCATAAATTCACAACATGGATCACTC 58.011 34.615 0.00 0.00 0.00 3.51
6700 20763 7.830697 TCATAAATTCACAACATGGATCACTCT 59.169 33.333 0.00 0.00 0.00 3.24
6701 20764 6.506500 AAATTCACAACATGGATCACTCTC 57.493 37.500 0.00 0.00 0.00 3.20
6702 20765 3.236632 TCACAACATGGATCACTCTCG 57.763 47.619 0.00 0.00 0.00 4.04
6703 20766 2.562738 TCACAACATGGATCACTCTCGT 59.437 45.455 0.00 0.00 0.00 4.18
6704 20767 2.669924 CACAACATGGATCACTCTCGTG 59.330 50.000 0.00 0.00 42.59 4.35
6705 20768 2.274437 CAACATGGATCACTCTCGTGG 58.726 52.381 0.00 0.00 41.53 4.94
6706 20769 1.561643 ACATGGATCACTCTCGTGGT 58.438 50.000 0.00 0.00 41.53 4.16
6707 20770 1.205655 ACATGGATCACTCTCGTGGTG 59.794 52.381 0.00 0.00 41.53 4.17
6708 20771 0.176680 ATGGATCACTCTCGTGGTGC 59.823 55.000 0.00 0.00 42.32 5.01
6709 20772 1.153549 GGATCACTCTCGTGGTGCC 60.154 63.158 0.00 0.00 41.53 5.01
6710 20773 1.591703 GATCACTCTCGTGGTGCCA 59.408 57.895 0.00 0.00 41.53 4.92
6711 20774 0.459237 GATCACTCTCGTGGTGCCAG 60.459 60.000 0.00 0.00 41.53 4.85
6712 20775 1.188219 ATCACTCTCGTGGTGCCAGT 61.188 55.000 0.00 0.00 41.53 4.00
6713 20776 1.665916 CACTCTCGTGGTGCCAGTG 60.666 63.158 0.00 0.00 37.50 3.66
6714 20777 2.740055 CTCTCGTGGTGCCAGTGC 60.740 66.667 0.00 0.00 38.26 4.40
6715 20778 4.314440 TCTCGTGGTGCCAGTGCC 62.314 66.667 0.00 0.00 36.33 5.01
6726 20789 4.154347 CAGTGCCCTCGCTCCCTC 62.154 72.222 0.00 0.00 35.36 4.30
6767 20830 4.699522 ACCTCTTGCCGCCGGTTC 62.700 66.667 4.45 0.00 0.00 3.62
6777 20840 4.789075 GCCGGTTCGCTGCGTAGA 62.789 66.667 22.48 6.68 0.00 2.59
6778 20841 2.104331 CCGGTTCGCTGCGTAGAT 59.896 61.111 22.48 0.00 0.00 1.98
6779 20842 1.944676 CCGGTTCGCTGCGTAGATC 60.945 63.158 22.48 8.76 0.00 2.75
6780 20843 1.944676 CGGTTCGCTGCGTAGATCC 60.945 63.158 22.48 15.49 0.00 3.36
6781 20844 1.591863 GGTTCGCTGCGTAGATCCC 60.592 63.158 22.48 6.12 0.00 3.85
6782 20845 1.591863 GTTCGCTGCGTAGATCCCC 60.592 63.158 22.48 0.00 0.00 4.81
6783 20846 2.055633 TTCGCTGCGTAGATCCCCA 61.056 57.895 22.48 0.00 0.00 4.96
6784 20847 2.279517 CGCTGCGTAGATCCCCAC 60.280 66.667 14.93 0.00 0.00 4.61
6785 20848 2.786495 CGCTGCGTAGATCCCCACT 61.786 63.158 14.93 0.00 0.00 4.00
6786 20849 1.452953 CGCTGCGTAGATCCCCACTA 61.453 60.000 14.93 0.00 0.00 2.74
6787 20850 0.032267 GCTGCGTAGATCCCCACTAC 59.968 60.000 4.08 0.00 37.45 2.73
6788 20851 1.693627 CTGCGTAGATCCCCACTACT 58.306 55.000 0.00 0.00 38.31 2.57
6789 20852 1.609555 CTGCGTAGATCCCCACTACTC 59.390 57.143 0.00 0.00 38.31 2.59
6790 20853 0.960286 GCGTAGATCCCCACTACTCC 59.040 60.000 0.00 0.00 38.31 3.85
6791 20854 1.618487 CGTAGATCCCCACTACTCCC 58.382 60.000 0.00 0.00 38.31 4.30
6792 20855 1.822457 CGTAGATCCCCACTACTCCCC 60.822 61.905 0.00 0.00 38.31 4.81
6793 20856 1.504221 GTAGATCCCCACTACTCCCCT 59.496 57.143 0.00 0.00 37.71 4.79
6794 20857 0.563672 AGATCCCCACTACTCCCCTC 59.436 60.000 0.00 0.00 0.00 4.30
6795 20858 0.563672 GATCCCCACTACTCCCCTCT 59.436 60.000 0.00 0.00 0.00 3.69
6796 20859 0.563672 ATCCCCACTACTCCCCTCTC 59.436 60.000 0.00 0.00 0.00 3.20
6797 20860 1.455959 CCCCACTACTCCCCTCTCG 60.456 68.421 0.00 0.00 0.00 4.04
6798 20861 2.128507 CCCACTACTCCCCTCTCGC 61.129 68.421 0.00 0.00 0.00 5.03
6799 20862 2.482333 CCACTACTCCCCTCTCGCG 61.482 68.421 0.00 0.00 0.00 5.87
6800 20863 2.124236 ACTACTCCCCTCTCGCGG 60.124 66.667 6.13 0.00 0.00 6.46
6801 20864 3.597728 CTACTCCCCTCTCGCGGC 61.598 72.222 6.13 0.00 0.00 6.53
6802 20865 4.124943 TACTCCCCTCTCGCGGCT 62.125 66.667 6.13 0.00 0.00 5.52
6803 20866 2.677765 CTACTCCCCTCTCGCGGCTA 62.678 65.000 6.13 0.00 0.00 3.93
6804 20867 2.677765 TACTCCCCTCTCGCGGCTAG 62.678 65.000 6.13 0.78 0.00 3.42
6805 20868 4.896829 TCCCCTCTCGCGGCTAGG 62.897 72.222 6.13 10.80 0.00 3.02
6808 20871 3.972276 CCTCTCGCGGCTAGGCTC 61.972 72.222 15.11 5.34 0.00 4.70
6809 20872 2.904866 CTCTCGCGGCTAGGCTCT 60.905 66.667 15.11 0.00 0.00 4.09
6810 20873 2.902846 TCTCGCGGCTAGGCTCTC 60.903 66.667 15.11 2.58 0.00 3.20
6811 20874 3.212682 CTCGCGGCTAGGCTCTCA 61.213 66.667 15.11 0.00 0.00 3.27
6812 20875 2.754254 TCGCGGCTAGGCTCTCAA 60.754 61.111 15.11 0.00 0.00 3.02
6813 20876 2.583593 CGCGGCTAGGCTCTCAAC 60.584 66.667 15.11 0.00 0.00 3.18
6814 20877 2.202946 GCGGCTAGGCTCTCAACC 60.203 66.667 15.11 0.00 0.00 3.77
6815 20878 2.501610 CGGCTAGGCTCTCAACCC 59.498 66.667 15.11 0.00 0.00 4.11
6816 20879 2.911928 GGCTAGGCTCTCAACCCC 59.088 66.667 9.46 0.00 0.00 4.95
6817 20880 2.501610 GCTAGGCTCTCAACCCCG 59.498 66.667 0.00 0.00 0.00 5.73
6818 20881 2.058595 GCTAGGCTCTCAACCCCGA 61.059 63.158 0.00 0.00 0.00 5.14
6819 20882 2.022240 GCTAGGCTCTCAACCCCGAG 62.022 65.000 0.00 0.00 0.00 4.63
6820 20883 0.395862 CTAGGCTCTCAACCCCGAGA 60.396 60.000 0.00 0.00 39.74 4.04
6821 20884 0.683504 TAGGCTCTCAACCCCGAGAC 60.684 60.000 0.00 0.00 37.12 3.36
6822 20885 2.182030 GCTCTCAACCCCGAGACG 59.818 66.667 0.00 0.00 37.12 4.18
6823 20886 2.182030 CTCTCAACCCCGAGACGC 59.818 66.667 0.00 0.00 37.12 5.19
6824 20887 3.685214 CTCTCAACCCCGAGACGCG 62.685 68.421 3.53 3.53 37.12 6.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 2.945008 TCACAAATGCATAGCACTAGGC 59.055 45.455 0.00 7.35 43.04 3.93
322 3946 7.852263 CGTTATCTCTATAATGGAAAGGGGAT 58.148 38.462 0.00 0.00 32.89 3.85
347 3971 6.978338 TGATGGTATAGTCGTCTGTATTTCC 58.022 40.000 0.00 0.00 0.00 3.13
359 3983 9.601217 AAACAGTACAATTCTGATGGTATAGTC 57.399 33.333 0.00 0.00 36.81 2.59
756 4392 1.467342 GGGACAATCTTTTTCGGACGG 59.533 52.381 0.00 0.00 0.00 4.79
757 4393 2.415512 GAGGGACAATCTTTTTCGGACG 59.584 50.000 0.00 0.00 0.00 4.79
760 4396 4.846779 TTTGAGGGACAATCTTTTTCGG 57.153 40.909 0.00 0.00 38.36 4.30
761 4397 5.048083 TCCATTTGAGGGACAATCTTTTTCG 60.048 40.000 0.00 0.00 38.36 3.46
762 4398 6.345096 TCCATTTGAGGGACAATCTTTTTC 57.655 37.500 0.00 0.00 38.36 2.29
763 4399 6.270695 ACATCCATTTGAGGGACAATCTTTTT 59.729 34.615 0.00 0.00 37.23 1.94
764 4400 5.781818 ACATCCATTTGAGGGACAATCTTTT 59.218 36.000 0.00 0.00 37.23 2.27
765 4401 5.336102 ACATCCATTTGAGGGACAATCTTT 58.664 37.500 0.00 0.00 37.23 2.52
767 4403 4.598036 ACATCCATTTGAGGGACAATCT 57.402 40.909 0.00 0.00 37.23 2.40
768 4404 6.302269 AGATACATCCATTTGAGGGACAATC 58.698 40.000 0.00 0.00 37.23 2.67
769 4405 6.271585 AGATACATCCATTTGAGGGACAAT 57.728 37.500 0.00 0.00 37.23 2.71
770 4406 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
771 4407 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
772 4408 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
773 4409 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
774 4410 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
775 4411 4.999950 GGTGCTAGATACATCCATTTGAGG 59.000 45.833 0.00 0.00 0.00 3.86
776 4412 5.614308 TGGTGCTAGATACATCCATTTGAG 58.386 41.667 0.00 0.00 0.00 3.02
777 4413 5.628797 TGGTGCTAGATACATCCATTTGA 57.371 39.130 0.00 0.00 0.00 2.69
778 4414 5.824624 ACTTGGTGCTAGATACATCCATTTG 59.175 40.000 0.00 0.00 0.00 2.32
779 4415 6.006275 ACTTGGTGCTAGATACATCCATTT 57.994 37.500 0.00 0.00 0.00 2.32
780 4416 5.636903 ACTTGGTGCTAGATACATCCATT 57.363 39.130 0.00 0.00 0.00 3.16
781 4417 5.636903 AACTTGGTGCTAGATACATCCAT 57.363 39.130 0.00 0.00 0.00 3.41
782 4418 5.661312 ACTAACTTGGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
783 4419 5.986135 CACTAACTTGGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
795 4431 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
796 4432 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
797 4433 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
798 4434 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
799 4435 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
800 4436 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
801 4437 8.144478 TCTCAAATGGATGTATCTAGCACTAAC 58.856 37.037 0.00 0.00 0.00 2.34
802 4438 8.250143 TCTCAAATGGATGTATCTAGCACTAA 57.750 34.615 0.00 0.00 0.00 2.24
803 4439 7.725844 TCTCTCAAATGGATGTATCTAGCACTA 59.274 37.037 0.00 0.00 0.00 2.74
804 4440 6.552725 TCTCTCAAATGGATGTATCTAGCACT 59.447 38.462 0.00 0.00 0.00 4.40
805 4441 6.644592 GTCTCTCAAATGGATGTATCTAGCAC 59.355 42.308 0.00 0.00 0.00 4.40
806 4442 6.324770 TGTCTCTCAAATGGATGTATCTAGCA 59.675 38.462 0.00 0.00 0.00 3.49
807 4443 6.753180 TGTCTCTCAAATGGATGTATCTAGC 58.247 40.000 0.00 0.00 0.00 3.42
808 4444 7.384660 GCTTGTCTCTCAAATGGATGTATCTAG 59.615 40.741 0.00 0.00 35.48 2.43
809 4445 7.070447 AGCTTGTCTCTCAAATGGATGTATCTA 59.930 37.037 0.00 0.00 35.48 1.98
810 4446 6.054295 GCTTGTCTCTCAAATGGATGTATCT 58.946 40.000 0.00 0.00 35.48 1.98
811 4447 6.054295 AGCTTGTCTCTCAAATGGATGTATC 58.946 40.000 0.00 0.00 35.48 2.24
812 4448 5.999044 AGCTTGTCTCTCAAATGGATGTAT 58.001 37.500 0.00 0.00 35.48 2.29
813 4449 5.426689 AGCTTGTCTCTCAAATGGATGTA 57.573 39.130 0.00 0.00 35.48 2.29
814 4450 4.298103 AGCTTGTCTCTCAAATGGATGT 57.702 40.909 0.00 0.00 35.48 3.06
815 4451 4.674623 GCAAGCTTGTCTCTCAAATGGATG 60.675 45.833 26.55 0.00 35.48 3.51
816 4452 3.442977 GCAAGCTTGTCTCTCAAATGGAT 59.557 43.478 26.55 0.00 35.48 3.41
817 4453 2.816087 GCAAGCTTGTCTCTCAAATGGA 59.184 45.455 26.55 0.00 35.48 3.41
818 4454 2.413765 CGCAAGCTTGTCTCTCAAATGG 60.414 50.000 26.55 0.00 35.48 3.16
819 4455 2.481568 TCGCAAGCTTGTCTCTCAAATG 59.518 45.455 26.55 0.00 35.48 2.32
820 4456 2.481952 GTCGCAAGCTTGTCTCTCAAAT 59.518 45.455 26.55 0.00 35.48 2.32
821 4457 1.867233 GTCGCAAGCTTGTCTCTCAAA 59.133 47.619 26.55 2.31 35.48 2.69
822 4458 1.202521 TGTCGCAAGCTTGTCTCTCAA 60.203 47.619 26.55 4.95 37.18 3.02
823 4459 0.389025 TGTCGCAAGCTTGTCTCTCA 59.611 50.000 26.55 15.59 37.18 3.27
824 4460 1.458827 CTTGTCGCAAGCTTGTCTCTC 59.541 52.381 26.55 9.43 37.18 3.20
825 4461 1.506493 CTTGTCGCAAGCTTGTCTCT 58.494 50.000 26.55 0.00 37.18 3.10
826 4462 0.110464 GCTTGTCGCAAGCTTGTCTC 60.110 55.000 26.55 16.60 40.01 3.36
827 4463 1.944778 GCTTGTCGCAAGCTTGTCT 59.055 52.632 26.55 0.00 40.01 3.41
880 4516 5.395214 CCAGTCCCAAATAAAACTTATGGCC 60.395 44.000 0.00 0.00 0.00 5.36
906 4548 5.463724 TGCGAAAATAAATTTTGGTTCGCTT 59.536 32.000 31.83 9.38 45.26 4.68
1207 4883 1.202722 AGTGGACCAACACCCTTTACG 60.203 52.381 0.00 0.00 42.28 3.18
1469 5227 8.237267 TCATATACACAGTATATCTCAAGCGTG 58.763 37.037 6.69 0.00 0.00 5.34
1550 6383 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
1551 6384 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
1552 6385 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
1553 6386 7.039923 TGCTCTTATATTAGTTTACGGAGGGAG 60.040 40.741 0.00 0.00 0.00 4.30
1554 6387 6.779049 TGCTCTTATATTAGTTTACGGAGGGA 59.221 38.462 0.00 0.00 0.00 4.20
1555 6388 6.989659 TGCTCTTATATTAGTTTACGGAGGG 58.010 40.000 0.00 0.00 0.00 4.30
1556 6389 9.490379 AAATGCTCTTATATTAGTTTACGGAGG 57.510 33.333 0.00 0.00 0.00 4.30
1584 6417 9.733219 AGCGTTTAGATTACTAAAGTAGTGATC 57.267 33.333 10.62 10.62 46.38 2.92
1585 6418 9.733219 GAGCGTTTAGATTACTAAAGTAGTGAT 57.267 33.333 0.00 0.00 45.42 3.06
1586 6419 8.954350 AGAGCGTTTAGATTACTAAAGTAGTGA 58.046 33.333 0.00 0.00 45.42 3.41
1587 6420 9.570488 AAGAGCGTTTAGATTACTAAAGTAGTG 57.430 33.333 0.00 0.00 45.42 2.74
1604 6437 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
1605 6438 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
1606 6439 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
1607 6440 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
1608 6441 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
1619 6452 9.490083 ACATAATAGTTACTCCCTCTGTAAACT 57.510 33.333 0.00 0.00 32.58 2.66
1624 6457 9.091220 GGATAACATAATAGTTACTCCCTCTGT 57.909 37.037 0.00 0.00 36.85 3.41
1625 6458 9.315363 AGGATAACATAATAGTTACTCCCTCTG 57.685 37.037 0.00 0.00 36.85 3.35
1626 6459 9.900112 AAGGATAACATAATAGTTACTCCCTCT 57.100 33.333 0.00 0.00 36.85 3.69
2219 7189 3.523606 TGCCATTTTGGACATACATGC 57.476 42.857 0.00 0.00 40.96 4.06
2269 7252 5.112220 TCACTGCACTGAATTCACAATTC 57.888 39.130 3.38 2.55 45.86 2.17
2321 7335 4.832248 AGCAGTCCATCTGTCGAAAATTA 58.168 39.130 0.00 0.00 45.23 1.40
2330 7356 1.242076 GCAACAAGCAGTCCATCTGT 58.758 50.000 0.00 0.00 45.23 3.41
2418 7461 1.400846 CAGCTAGTCCGCTACGAAAGA 59.599 52.381 0.00 0.00 38.41 2.52
2423 7466 3.497640 AGTATAACAGCTAGTCCGCTACG 59.502 47.826 0.00 0.00 38.41 3.51
2594 7646 2.942376 TCCAATCACGCACATATGGAAC 59.058 45.455 7.80 0.00 34.21 3.62
2975 9307 7.943079 AATGTCTTGATGTGTCAATGGAATA 57.057 32.000 0.00 0.00 43.08 1.75
3009 9553 6.335777 GGATGAATGATTTGGTTCCAGAAAG 58.664 40.000 0.00 0.00 0.00 2.62
3020 9564 5.791974 GCGATCAATACGGATGAATGATTTG 59.208 40.000 0.00 0.00 31.24 2.32
3027 9571 5.351189 CCATAATGCGATCAATACGGATGAA 59.649 40.000 0.00 0.00 41.10 2.57
3031 9575 4.529109 TCCATAATGCGATCAATACGGA 57.471 40.909 0.00 0.00 35.42 4.69
3033 9577 8.443160 ACTTTTATCCATAATGCGATCAATACG 58.557 33.333 0.00 0.00 0.00 3.06
3058 9602 0.672401 TCTCGTTCCCATTCGGCAAC 60.672 55.000 0.00 0.00 0.00 4.17
3069 9614 2.642139 TTGACACCGTATCTCGTTCC 57.358 50.000 0.00 0.00 37.94 3.62
3079 9624 3.066203 GGAAGACAAACATTTGACACCGT 59.934 43.478 11.24 0.00 40.55 4.83
3107 9653 6.015095 GGAAAAGAAAACACATGGATCCTTCT 60.015 38.462 14.23 8.74 0.00 2.85
3112 9658 5.011023 AGTGGGAAAAGAAAACACATGGATC 59.989 40.000 0.00 0.00 34.65 3.36
3113 9659 4.901250 AGTGGGAAAAGAAAACACATGGAT 59.099 37.500 0.00 0.00 34.65 3.41
3117 9663 7.418337 AGTTAAGTGGGAAAAGAAAACACAT 57.582 32.000 0.00 0.00 34.65 3.21
3175 9721 9.499479 CAAAGTGATCCTTAGAGCATATGTTAT 57.501 33.333 4.29 0.00 41.24 1.89
3177 9723 7.568349 TCAAAGTGATCCTTAGAGCATATGTT 58.432 34.615 4.29 0.00 41.24 2.71
3183 9729 6.798427 AGTATCAAAGTGATCCTTAGAGCA 57.202 37.500 0.00 0.00 38.26 4.26
3199 9745 4.825085 AGACGCCCAAAAGAAAAGTATCAA 59.175 37.500 0.00 0.00 0.00 2.57
3200 9746 4.394729 AGACGCCCAAAAGAAAAGTATCA 58.605 39.130 0.00 0.00 0.00 2.15
3201 9747 4.454504 TGAGACGCCCAAAAGAAAAGTATC 59.545 41.667 0.00 0.00 0.00 2.24
3202 9748 4.394729 TGAGACGCCCAAAAGAAAAGTAT 58.605 39.130 0.00 0.00 0.00 2.12
3203 9749 3.811083 TGAGACGCCCAAAAGAAAAGTA 58.189 40.909 0.00 0.00 0.00 2.24
3205 9751 2.618709 ACTGAGACGCCCAAAAGAAAAG 59.381 45.455 0.00 0.00 0.00 2.27
3210 9759 1.593196 TGAACTGAGACGCCCAAAAG 58.407 50.000 0.00 0.00 0.00 2.27
3211 9760 1.946768 CTTGAACTGAGACGCCCAAAA 59.053 47.619 0.00 0.00 0.00 2.44
3214 9763 0.249868 CACTTGAACTGAGACGCCCA 60.250 55.000 0.00 0.00 0.00 5.36
3217 9766 0.249911 ACCCACTTGAACTGAGACGC 60.250 55.000 0.00 0.00 0.00 5.19
3388 10077 9.796120 GAGCTGGTAAAAGAGCATATATAGTAG 57.204 37.037 0.00 0.00 37.70 2.57
3397 10086 3.439857 TTGGAGCTGGTAAAAGAGCAT 57.560 42.857 0.00 0.00 37.70 3.79
3398 10087 2.949177 TTGGAGCTGGTAAAAGAGCA 57.051 45.000 0.00 0.00 37.70 4.26
3399 10088 4.218417 TCAATTTGGAGCTGGTAAAAGAGC 59.782 41.667 0.00 0.00 35.28 4.09
3400 10089 5.964958 TCAATTTGGAGCTGGTAAAAGAG 57.035 39.130 0.00 0.00 0.00 2.85
3402 10091 6.071728 ACTGATCAATTTGGAGCTGGTAAAAG 60.072 38.462 0.00 0.00 0.00 2.27
3403 10092 5.774690 ACTGATCAATTTGGAGCTGGTAAAA 59.225 36.000 0.00 0.00 0.00 1.52
3696 10880 5.709164 CCAGGCCTCATTTGGAATAATCTAG 59.291 44.000 0.00 0.00 33.76 2.43
3776 11033 0.038744 AATCTTGTCCTGGCCCTGTG 59.961 55.000 0.00 0.00 0.00 3.66
3836 11100 5.487488 TGTTAGATAACAGTCATGGGGAACT 59.513 40.000 1.30 0.00 40.93 3.01
3926 11200 2.224606 CCAAGCTGACACAATGTGAGT 58.775 47.619 21.34 0.00 34.01 3.41
4151 11427 9.150348 CAAACAGACAAATTAAAGTCAACCTTT 57.850 29.630 7.93 0.00 45.36 3.11
4152 11428 8.311109 ACAAACAGACAAATTAAAGTCAACCTT 58.689 29.630 7.93 0.00 37.23 3.50
4153 11429 7.759433 CACAAACAGACAAATTAAAGTCAACCT 59.241 33.333 7.93 0.00 37.23 3.50
4154 11430 7.757624 TCACAAACAGACAAATTAAAGTCAACC 59.242 33.333 7.93 0.00 37.23 3.77
4155 11431 8.682128 TCACAAACAGACAAATTAAAGTCAAC 57.318 30.769 7.93 0.00 37.23 3.18
4156 11432 9.515020 GATCACAAACAGACAAATTAAAGTCAA 57.485 29.630 7.93 0.00 37.23 3.18
4157 11433 7.855409 CGATCACAAACAGACAAATTAAAGTCA 59.145 33.333 7.93 0.00 37.23 3.41
4158 11434 8.067784 TCGATCACAAACAGACAAATTAAAGTC 58.932 33.333 0.00 0.00 35.02 3.01
4159 11435 7.925993 TCGATCACAAACAGACAAATTAAAGT 58.074 30.769 0.00 0.00 0.00 2.66
4160 11436 8.781067 TTCGATCACAAACAGACAAATTAAAG 57.219 30.769 0.00 0.00 0.00 1.85
4161 11437 9.015577 GTTTCGATCACAAACAGACAAATTAAA 57.984 29.630 10.91 0.00 34.43 1.52
4162 11438 8.402472 AGTTTCGATCACAAACAGACAAATTAA 58.598 29.630 16.00 0.00 36.38 1.40
4167 11443 4.272504 GGAGTTTCGATCACAAACAGACAA 59.727 41.667 16.00 0.00 36.38 3.18
4264 12913 5.825679 ACCAACAGCACATCTAACTTTTGTA 59.174 36.000 0.00 0.00 0.00 2.41
4322 13207 1.878953 TCTGAAACAAAGGGAGTCGC 58.121 50.000 0.00 0.00 0.00 5.19
4354 13239 8.944212 AAAATAACTAAAATCGTGTTTCCTCG 57.056 30.769 0.00 0.00 0.00 4.63
4388 13393 4.815269 AGAGATCTTCCAGACTGTTTTCG 58.185 43.478 0.00 0.00 0.00 3.46
4427 13451 0.040204 AGACAGGCCAAGGGAAATGG 59.960 55.000 5.01 0.00 41.08 3.16
4429 13453 1.005215 CAGAGACAGGCCAAGGGAAAT 59.995 52.381 5.01 0.00 0.00 2.17
4659 13712 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
4710 13763 7.536850 AACACACTGGAGTGAGTGGATCATC 62.537 48.000 13.74 0.00 46.36 2.92
4722 13775 7.127339 AGGGTATATATTTCAACACACTGGAGT 59.873 37.037 0.00 0.00 0.00 3.85
4951 14982 5.480073 TCAAGCTTGGTTGCCTACAATAATT 59.520 36.000 25.73 0.00 38.27 1.40
5176 15210 5.129368 TCAGAGGATAAAAAGGGATTGGG 57.871 43.478 0.00 0.00 0.00 4.12
5277 15314 4.871993 ATGCGTTCTCAATCTCAACATC 57.128 40.909 0.00 0.00 0.00 3.06
5307 15344 4.366267 AGACACAGAGATGGGGATAAGTT 58.634 43.478 0.00 0.00 0.00 2.66
5347 15394 6.929049 CCCGAGTGAGATTTATGCTTACATTA 59.071 38.462 0.00 0.00 37.74 1.90
5348 15395 5.760253 CCCGAGTGAGATTTATGCTTACATT 59.240 40.000 0.00 0.00 37.74 2.71
5349 15396 5.070446 TCCCGAGTGAGATTTATGCTTACAT 59.930 40.000 0.00 0.00 40.49 2.29
5362 15409 2.698797 GGTAATGGATTCCCGAGTGAGA 59.301 50.000 0.00 0.00 34.29 3.27
5370 15417 2.702592 TGACACGGTAATGGATTCCC 57.297 50.000 0.00 0.00 0.00 3.97
5374 15421 7.223584 TGATTTATCATGACACGGTAATGGAT 58.776 34.615 0.00 0.00 0.00 3.41
5407 15458 5.236478 ACCGTATGCATGTTTTAGTATGAGC 59.764 40.000 10.16 0.00 0.00 4.26
5408 15459 6.478673 TCACCGTATGCATGTTTTAGTATGAG 59.521 38.462 10.16 0.00 0.00 2.90
5495 15546 7.836685 TGGACAGCCCTAAAATGAATATTTGTA 59.163 33.333 0.00 0.00 34.75 2.41
5634 15829 8.706035 GTGAAATTTTGACCATCAATTTCTCTG 58.294 33.333 18.59 0.00 43.12 3.35
5688 18145 9.927081 TGCTCCATCTGATCATAGATATAAGTA 57.073 33.333 0.00 0.00 35.70 2.24
5699 18156 8.651589 AAAAATCATATGCTCCATCTGATCAT 57.348 30.769 0.00 0.00 36.92 2.45
5729 18209 6.549364 ACAACACAATTTGGGATTCACTCTTA 59.451 34.615 5.47 0.00 0.00 2.10
5913 18412 4.054780 ACTACGCAGAACTTCACTGAAA 57.945 40.909 0.00 0.00 37.54 2.69
6102 18654 2.489329 CCAACACACCATGGATCAGTTC 59.511 50.000 21.47 0.00 39.12 3.01
6112 18664 1.999648 ACTTCATGCCAACACACCAT 58.000 45.000 0.00 0.00 0.00 3.55
6120 18672 2.307496 ACCATCCAACTTCATGCCAA 57.693 45.000 0.00 0.00 0.00 4.52
6149 18739 7.669304 TGTCCAAATTCAAGACATCTCCAATTA 59.331 33.333 2.07 0.00 35.67 1.40
6174 18764 4.511082 ACCCAAACGCAGAAATTGAAAATG 59.489 37.500 0.00 0.00 0.00 2.32
6175 18765 4.702831 ACCCAAACGCAGAAATTGAAAAT 58.297 34.783 0.00 0.00 0.00 1.82
6176 18766 4.130286 ACCCAAACGCAGAAATTGAAAA 57.870 36.364 0.00 0.00 0.00 2.29
6182 18815 4.039852 ACCAATAAACCCAAACGCAGAAAT 59.960 37.500 0.00 0.00 0.00 2.17
6183 18816 3.385111 ACCAATAAACCCAAACGCAGAAA 59.615 39.130 0.00 0.00 0.00 2.52
6188 18821 8.481974 AAAATATAACCAATAAACCCAAACGC 57.518 30.769 0.00 0.00 0.00 4.84
6245 18879 6.153000 CAGGAGACTCTTGCTAAACTAGGTAA 59.847 42.308 1.13 0.00 40.21 2.85
6246 18880 5.652891 CAGGAGACTCTTGCTAAACTAGGTA 59.347 44.000 1.13 0.00 40.21 3.08
6247 18881 4.464597 CAGGAGACTCTTGCTAAACTAGGT 59.535 45.833 1.13 0.00 40.21 3.08
6410 20473 1.195347 CGCGCATCTCTGTTCTAGTG 58.805 55.000 8.75 0.00 0.00 2.74
6420 20483 3.957535 CCCCAATGCGCGCATCTC 61.958 66.667 43.06 10.71 35.31 2.75
6440 20503 3.855689 AAAAATCATCCTCCGCAACTG 57.144 42.857 0.00 0.00 0.00 3.16
6459 20522 7.467675 GCTTTAGAGTTCGAACCACCTTAAAAA 60.468 37.037 24.22 14.02 0.00 1.94
6460 20523 6.017687 GCTTTAGAGTTCGAACCACCTTAAAA 60.018 38.462 24.22 14.58 0.00 1.52
6461 20524 5.467735 GCTTTAGAGTTCGAACCACCTTAAA 59.532 40.000 24.22 17.85 0.00 1.52
6462 20525 4.992951 GCTTTAGAGTTCGAACCACCTTAA 59.007 41.667 24.22 16.29 0.00 1.85
6463 20526 4.562143 GGCTTTAGAGTTCGAACCACCTTA 60.562 45.833 24.22 10.45 0.00 2.69
6464 20527 3.400255 GCTTTAGAGTTCGAACCACCTT 58.600 45.455 24.22 5.64 0.00 3.50
6465 20528 2.289506 GGCTTTAGAGTTCGAACCACCT 60.290 50.000 24.22 19.54 0.00 4.00
6466 20529 2.074576 GGCTTTAGAGTTCGAACCACC 58.925 52.381 24.22 13.76 0.00 4.61
6467 20530 1.725164 CGGCTTTAGAGTTCGAACCAC 59.275 52.381 24.22 17.95 0.00 4.16
6468 20531 1.614903 TCGGCTTTAGAGTTCGAACCA 59.385 47.619 24.22 7.68 31.52 3.67
6469 20532 2.358939 TCGGCTTTAGAGTTCGAACC 57.641 50.000 24.22 15.46 31.52 3.62
6470 20533 6.399204 TTTATTCGGCTTTAGAGTTCGAAC 57.601 37.500 20.71 20.71 40.49 3.95
6471 20534 6.814644 TCATTTATTCGGCTTTAGAGTTCGAA 59.185 34.615 12.91 12.91 41.22 3.71
6472 20535 6.334989 TCATTTATTCGGCTTTAGAGTTCGA 58.665 36.000 0.00 0.00 0.00 3.71
6473 20536 6.583912 TCATTTATTCGGCTTTAGAGTTCG 57.416 37.500 0.00 0.00 0.00 3.95
6474 20537 7.852945 CACATCATTTATTCGGCTTTAGAGTTC 59.147 37.037 0.00 0.00 0.00 3.01
6475 20538 7.552687 TCACATCATTTATTCGGCTTTAGAGTT 59.447 33.333 0.00 0.00 0.00 3.01
6476 20539 7.047891 TCACATCATTTATTCGGCTTTAGAGT 58.952 34.615 0.00 0.00 0.00 3.24
6477 20540 7.482654 TCACATCATTTATTCGGCTTTAGAG 57.517 36.000 0.00 0.00 0.00 2.43
6478 20541 7.520453 GCATCACATCATTTATTCGGCTTTAGA 60.520 37.037 0.00 0.00 0.00 2.10
6479 20542 6.580041 GCATCACATCATTTATTCGGCTTTAG 59.420 38.462 0.00 0.00 0.00 1.85
6480 20543 6.039159 TGCATCACATCATTTATTCGGCTTTA 59.961 34.615 0.00 0.00 0.00 1.85
6481 20544 5.163530 TGCATCACATCATTTATTCGGCTTT 60.164 36.000 0.00 0.00 0.00 3.51
6482 20545 4.338964 TGCATCACATCATTTATTCGGCTT 59.661 37.500 0.00 0.00 0.00 4.35
6483 20546 3.884693 TGCATCACATCATTTATTCGGCT 59.115 39.130 0.00 0.00 0.00 5.52
6484 20547 4.227512 TGCATCACATCATTTATTCGGC 57.772 40.909 0.00 0.00 0.00 5.54
6485 20548 8.238631 TGATATTGCATCACATCATTTATTCGG 58.761 33.333 0.00 0.00 0.00 4.30
6486 20549 9.615295 TTGATATTGCATCACATCATTTATTCG 57.385 29.630 0.00 0.00 0.00 3.34
6492 20555 9.419297 GCTATTTTGATATTGCATCACATCATT 57.581 29.630 0.00 0.00 0.00 2.57
6493 20556 8.803235 AGCTATTTTGATATTGCATCACATCAT 58.197 29.630 0.00 0.00 0.00 2.45
6494 20557 8.173542 AGCTATTTTGATATTGCATCACATCA 57.826 30.769 0.00 0.00 0.00 3.07
6495 20558 9.472361 AAAGCTATTTTGATATTGCATCACATC 57.528 29.630 0.00 0.00 0.00 3.06
6496 20559 9.826574 AAAAGCTATTTTGATATTGCATCACAT 57.173 25.926 0.00 0.00 37.24 3.21
6499 20562 9.449550 CGTAAAAGCTATTTTGATATTGCATCA 57.550 29.630 0.00 0.00 39.01 3.07
6500 20563 8.420189 GCGTAAAAGCTATTTTGATATTGCATC 58.580 33.333 0.00 0.00 39.01 3.91
6501 20564 7.920151 TGCGTAAAAGCTATTTTGATATTGCAT 59.080 29.630 0.00 0.00 39.01 3.96
6502 20565 7.254137 TGCGTAAAAGCTATTTTGATATTGCA 58.746 30.769 0.00 0.00 39.01 4.08
6503 20566 7.678194 TGCGTAAAAGCTATTTTGATATTGC 57.322 32.000 0.00 0.00 39.01 3.56
6511 20574 9.233232 GCACTATTATTGCGTAAAAGCTATTTT 57.767 29.630 0.00 0.00 41.48 1.82
6512 20575 8.402472 TGCACTATTATTGCGTAAAAGCTATTT 58.598 29.630 0.00 0.00 43.34 1.40
6513 20576 7.855904 GTGCACTATTATTGCGTAAAAGCTATT 59.144 33.333 10.32 0.00 43.34 1.73
6514 20577 7.226720 AGTGCACTATTATTGCGTAAAAGCTAT 59.773 33.333 20.16 0.00 43.34 2.97
6515 20578 6.537301 AGTGCACTATTATTGCGTAAAAGCTA 59.463 34.615 20.16 0.00 43.34 3.32
6516 20579 5.354234 AGTGCACTATTATTGCGTAAAAGCT 59.646 36.000 20.16 0.00 43.34 3.74
6517 20580 5.569413 AGTGCACTATTATTGCGTAAAAGC 58.431 37.500 20.16 0.00 43.34 3.51
6518 20581 6.682863 GTGAGTGCACTATTATTGCGTAAAAG 59.317 38.462 21.73 0.00 43.34 2.27
6519 20582 6.147985 TGTGAGTGCACTATTATTGCGTAAAA 59.852 34.615 21.73 0.00 45.36 1.52
6520 20583 5.639931 TGTGAGTGCACTATTATTGCGTAAA 59.360 36.000 21.73 0.00 45.36 2.01
6521 20584 5.172205 TGTGAGTGCACTATTATTGCGTAA 58.828 37.500 21.73 0.00 45.36 3.18
6522 20585 4.749976 TGTGAGTGCACTATTATTGCGTA 58.250 39.130 21.73 0.00 45.36 4.42
6523 20586 3.595173 TGTGAGTGCACTATTATTGCGT 58.405 40.909 21.73 0.00 45.36 5.24
6524 20587 4.598406 TTGTGAGTGCACTATTATTGCG 57.402 40.909 21.73 0.00 45.36 4.85
6525 20588 7.816945 AAAATTGTGAGTGCACTATTATTGC 57.183 32.000 21.73 5.88 45.35 3.56
6526 20589 8.998989 CGTAAAATTGTGAGTGCACTATTATTG 58.001 33.333 21.73 3.70 45.35 1.90
6527 20590 8.726988 ACGTAAAATTGTGAGTGCACTATTATT 58.273 29.630 21.73 13.77 45.35 1.40
6528 20591 8.175069 CACGTAAAATTGTGAGTGCACTATTAT 58.825 33.333 21.73 8.31 45.35 1.28
6529 20592 7.385478 TCACGTAAAATTGTGAGTGCACTATTA 59.615 33.333 21.73 6.59 45.35 0.98
6531 20594 5.699001 TCACGTAAAATTGTGAGTGCACTAT 59.301 36.000 21.73 6.69 45.36 2.12
6532 20595 5.051153 TCACGTAAAATTGTGAGTGCACTA 58.949 37.500 21.73 4.02 45.36 2.74
6533 20596 3.874543 TCACGTAAAATTGTGAGTGCACT 59.125 39.130 21.88 21.88 45.36 4.40
6534 20597 4.203950 TCACGTAAAATTGTGAGTGCAC 57.796 40.909 9.40 9.40 45.35 4.57
6579 20642 9.101655 GGTTTATTCAAATATGCTTGCATTTCT 57.898 29.630 13.52 0.00 0.00 2.52
6580 20643 9.101655 AGGTTTATTCAAATATGCTTGCATTTC 57.898 29.630 13.52 0.00 0.00 2.17
6581 20644 8.885722 CAGGTTTATTCAAATATGCTTGCATTT 58.114 29.630 13.52 3.06 0.00 2.32
6582 20645 8.259411 TCAGGTTTATTCAAATATGCTTGCATT 58.741 29.630 13.52 0.00 0.00 3.56
6583 20646 7.784037 TCAGGTTTATTCAAATATGCTTGCAT 58.216 30.769 12.88 12.88 0.00 3.96
6584 20647 7.167924 TCAGGTTTATTCAAATATGCTTGCA 57.832 32.000 0.00 0.00 0.00 4.08
6585 20648 8.477984 TTTCAGGTTTATTCAAATATGCTTGC 57.522 30.769 0.00 0.00 0.00 4.01
6587 20650 9.995003 TGTTTTCAGGTTTATTCAAATATGCTT 57.005 25.926 0.00 0.00 0.00 3.91
6602 20665 8.416329 GCTTCATTATCCATATGTTTTCAGGTT 58.584 33.333 1.24 0.00 0.00 3.50
6603 20666 7.781693 AGCTTCATTATCCATATGTTTTCAGGT 59.218 33.333 1.24 0.00 0.00 4.00
6604 20667 8.174733 AGCTTCATTATCCATATGTTTTCAGG 57.825 34.615 1.24 0.00 0.00 3.86
6610 20673 9.918630 GCATTAAAGCTTCATTATCCATATGTT 57.081 29.630 0.00 0.00 0.00 2.71
6611 20674 9.305555 AGCATTAAAGCTTCATTATCCATATGT 57.694 29.630 0.00 0.00 43.70 2.29
6615 20678 9.524496 TGATAGCATTAAAGCTTCATTATCCAT 57.476 29.630 10.90 0.00 43.70 3.41
6616 20679 8.922931 TGATAGCATTAAAGCTTCATTATCCA 57.077 30.769 10.90 0.00 43.70 3.41
6622 20685 9.745880 CAATCTTTGATAGCATTAAAGCTTCAT 57.254 29.630 10.90 0.00 43.70 2.57
6623 20686 7.703621 GCAATCTTTGATAGCATTAAAGCTTCA 59.296 33.333 10.90 11.03 43.70 3.02
6624 20687 7.096722 CGCAATCTTTGATAGCATTAAAGCTTC 60.097 37.037 10.90 8.77 43.70 3.86
6625 20688 6.694411 CGCAATCTTTGATAGCATTAAAGCTT 59.306 34.615 10.90 0.00 43.70 3.74
6627 20690 6.201517 TCGCAATCTTTGATAGCATTAAAGC 58.798 36.000 0.00 0.00 36.24 3.51
6628 20691 7.096722 GCTTCGCAATCTTTGATAGCATTAAAG 60.097 37.037 0.00 6.91 37.25 1.85
6629 20692 6.692681 GCTTCGCAATCTTTGATAGCATTAAA 59.307 34.615 0.00 0.00 33.20 1.52
6630 20693 6.038603 AGCTTCGCAATCTTTGATAGCATTAA 59.961 34.615 0.00 0.00 34.47 1.40
6631 20694 5.528690 AGCTTCGCAATCTTTGATAGCATTA 59.471 36.000 0.00 0.00 34.47 1.90
6632 20695 4.337555 AGCTTCGCAATCTTTGATAGCATT 59.662 37.500 0.00 0.00 34.47 3.56
6633 20696 3.881688 AGCTTCGCAATCTTTGATAGCAT 59.118 39.130 0.00 0.00 34.47 3.79
6634 20697 3.064408 CAGCTTCGCAATCTTTGATAGCA 59.936 43.478 0.00 0.00 34.47 3.49
6635 20698 3.064545 ACAGCTTCGCAATCTTTGATAGC 59.935 43.478 0.00 0.00 33.16 2.97
6636 20699 4.871993 ACAGCTTCGCAATCTTTGATAG 57.128 40.909 0.00 0.00 0.00 2.08
6637 20700 4.937620 AGAACAGCTTCGCAATCTTTGATA 59.062 37.500 0.00 0.00 0.00 2.15
6638 20701 3.755378 AGAACAGCTTCGCAATCTTTGAT 59.245 39.130 0.00 0.00 0.00 2.57
6639 20702 3.141398 AGAACAGCTTCGCAATCTTTGA 58.859 40.909 0.00 0.00 0.00 2.69
6640 20703 3.058708 TGAGAACAGCTTCGCAATCTTTG 60.059 43.478 0.00 0.00 33.71 2.77
6641 20704 3.141398 TGAGAACAGCTTCGCAATCTTT 58.859 40.909 0.00 0.00 33.71 2.52
6642 20705 2.740981 CTGAGAACAGCTTCGCAATCTT 59.259 45.455 0.00 0.00 35.98 2.40
6643 20706 2.028658 TCTGAGAACAGCTTCGCAATCT 60.029 45.455 0.00 0.00 43.17 2.40
6644 20707 2.341257 TCTGAGAACAGCTTCGCAATC 58.659 47.619 0.00 0.00 43.17 2.67
6645 20708 2.462456 TCTGAGAACAGCTTCGCAAT 57.538 45.000 0.00 0.00 43.17 3.56
6646 20709 2.238942 TTCTGAGAACAGCTTCGCAA 57.761 45.000 0.00 0.00 43.17 4.85
6647 20710 2.238942 TTTCTGAGAACAGCTTCGCA 57.761 45.000 0.00 0.00 43.17 5.10
6648 20711 3.820777 ATTTTCTGAGAACAGCTTCGC 57.179 42.857 0.00 0.00 43.17 4.70
6649 20712 6.658831 TGTAAATTTTCTGAGAACAGCTTCG 58.341 36.000 0.00 0.00 43.17 3.79
6650 20713 8.292448 TGATGTAAATTTTCTGAGAACAGCTTC 58.708 33.333 0.00 0.00 43.17 3.86
6651 20714 8.169977 TGATGTAAATTTTCTGAGAACAGCTT 57.830 30.769 0.00 0.00 43.17 3.74
6652 20715 7.750229 TGATGTAAATTTTCTGAGAACAGCT 57.250 32.000 0.00 0.00 43.17 4.24
6670 20733 9.406113 TGATCCATGTTGTGAATTTATGATGTA 57.594 29.630 0.00 0.00 0.00 2.29
6671 20734 8.192774 GTGATCCATGTTGTGAATTTATGATGT 58.807 33.333 0.00 0.00 0.00 3.06
6672 20735 8.410912 AGTGATCCATGTTGTGAATTTATGATG 58.589 33.333 0.00 0.00 0.00 3.07
6673 20736 8.529424 AGTGATCCATGTTGTGAATTTATGAT 57.471 30.769 0.00 0.00 0.00 2.45
6674 20737 7.830697 AGAGTGATCCATGTTGTGAATTTATGA 59.169 33.333 0.00 0.00 0.00 2.15
6675 20738 7.993101 AGAGTGATCCATGTTGTGAATTTATG 58.007 34.615 0.00 0.00 0.00 1.90
6676 20739 7.011763 CGAGAGTGATCCATGTTGTGAATTTAT 59.988 37.037 0.00 0.00 0.00 1.40
6677 20740 6.313658 CGAGAGTGATCCATGTTGTGAATTTA 59.686 38.462 0.00 0.00 0.00 1.40
6678 20741 5.122869 CGAGAGTGATCCATGTTGTGAATTT 59.877 40.000 0.00 0.00 0.00 1.82
6679 20742 4.633126 CGAGAGTGATCCATGTTGTGAATT 59.367 41.667 0.00 0.00 0.00 2.17
6680 20743 4.186926 CGAGAGTGATCCATGTTGTGAAT 58.813 43.478 0.00 0.00 0.00 2.57
6681 20744 3.006859 ACGAGAGTGATCCATGTTGTGAA 59.993 43.478 0.00 0.00 46.97 3.18
6682 20745 2.562738 ACGAGAGTGATCCATGTTGTGA 59.437 45.455 0.00 0.00 46.97 3.58
6683 20746 2.964740 ACGAGAGTGATCCATGTTGTG 58.035 47.619 0.00 0.00 46.97 3.33
6696 20759 3.521529 GCACTGGCACCACGAGAGT 62.522 63.158 0.00 0.00 43.23 3.24
6697 20760 2.740055 GCACTGGCACCACGAGAG 60.740 66.667 0.00 0.00 40.72 3.20
6698 20761 4.314440 GGCACTGGCACCACGAGA 62.314 66.667 0.00 0.00 43.71 4.04
6709 20772 4.154347 GAGGGAGCGAGGGCACTG 62.154 72.222 0.00 0.00 43.41 3.66
6750 20813 4.699522 GAACCGGCGGCAAGAGGT 62.700 66.667 28.71 4.94 38.88 3.85
6760 20823 4.789075 TCTACGCAGCGAACCGGC 62.789 66.667 24.65 0.00 0.00 6.13
6761 20824 1.944676 GATCTACGCAGCGAACCGG 60.945 63.158 24.65 0.00 0.00 5.28
6762 20825 1.944676 GGATCTACGCAGCGAACCG 60.945 63.158 24.65 6.43 0.00 4.44
6763 20826 1.591863 GGGATCTACGCAGCGAACC 60.592 63.158 24.65 15.49 0.00 3.62
6764 20827 1.591863 GGGGATCTACGCAGCGAAC 60.592 63.158 24.65 7.31 0.00 3.95
6765 20828 2.055633 TGGGGATCTACGCAGCGAA 61.056 57.895 24.65 6.79 0.00 4.70
6766 20829 2.441348 TGGGGATCTACGCAGCGA 60.441 61.111 24.65 4.11 0.00 4.93
6767 20830 1.452953 TAGTGGGGATCTACGCAGCG 61.453 60.000 14.82 14.82 33.73 5.18
6768 20831 0.032267 GTAGTGGGGATCTACGCAGC 59.968 60.000 0.00 0.00 33.73 5.25
6769 20832 1.609555 GAGTAGTGGGGATCTACGCAG 59.390 57.143 0.00 0.00 41.55 5.18
6770 20833 1.688772 GAGTAGTGGGGATCTACGCA 58.311 55.000 0.00 0.00 41.55 5.24
6771 20834 0.960286 GGAGTAGTGGGGATCTACGC 59.040 60.000 0.00 0.00 41.55 4.42
6772 20835 1.618487 GGGAGTAGTGGGGATCTACG 58.382 60.000 0.00 0.00 41.55 3.51
6773 20836 1.504221 AGGGGAGTAGTGGGGATCTAC 59.496 57.143 0.00 0.00 38.30 2.59
6774 20837 1.787676 GAGGGGAGTAGTGGGGATCTA 59.212 57.143 0.00 0.00 0.00 1.98
6775 20838 0.563672 GAGGGGAGTAGTGGGGATCT 59.436 60.000 0.00 0.00 0.00 2.75
6776 20839 0.563672 AGAGGGGAGTAGTGGGGATC 59.436 60.000 0.00 0.00 0.00 3.36
6777 20840 0.563672 GAGAGGGGAGTAGTGGGGAT 59.436 60.000 0.00 0.00 0.00 3.85
6778 20841 1.934459 CGAGAGGGGAGTAGTGGGGA 61.934 65.000 0.00 0.00 0.00 4.81
6779 20842 1.455959 CGAGAGGGGAGTAGTGGGG 60.456 68.421 0.00 0.00 0.00 4.96
6780 20843 2.128507 GCGAGAGGGGAGTAGTGGG 61.129 68.421 0.00 0.00 0.00 4.61
6781 20844 2.482333 CGCGAGAGGGGAGTAGTGG 61.482 68.421 0.00 0.00 40.85 4.00
6782 20845 3.111939 CGCGAGAGGGGAGTAGTG 58.888 66.667 0.00 0.00 40.85 2.74
6791 20854 3.972276 GAGCCTAGCCGCGAGAGG 61.972 72.222 8.23 12.30 0.00 3.69
6792 20855 2.903547 GAGAGCCTAGCCGCGAGAG 61.904 68.421 8.23 0.53 0.00 3.20
6793 20856 2.902846 GAGAGCCTAGCCGCGAGA 60.903 66.667 8.23 0.00 0.00 4.04
6794 20857 2.775856 TTGAGAGCCTAGCCGCGAG 61.776 63.158 8.23 0.00 0.00 5.03
6795 20858 2.754254 TTGAGAGCCTAGCCGCGA 60.754 61.111 8.23 0.00 0.00 5.87
6796 20859 2.583593 GTTGAGAGCCTAGCCGCG 60.584 66.667 0.00 0.00 0.00 6.46
6797 20860 2.202946 GGTTGAGAGCCTAGCCGC 60.203 66.667 0.00 0.00 0.00 6.53
6798 20861 2.501610 GGGTTGAGAGCCTAGCCG 59.498 66.667 0.00 0.00 40.37 5.52
6799 20862 2.911928 GGGGTTGAGAGCCTAGCC 59.088 66.667 0.00 0.00 43.15 3.93
6800 20863 2.022240 CTCGGGGTTGAGAGCCTAGC 62.022 65.000 0.00 0.00 43.15 3.42
6801 20864 0.395862 TCTCGGGGTTGAGAGCCTAG 60.396 60.000 0.00 0.00 43.15 3.02
6802 20865 0.683504 GTCTCGGGGTTGAGAGCCTA 60.684 60.000 0.00 0.00 45.24 3.93
6803 20866 1.985116 GTCTCGGGGTTGAGAGCCT 60.985 63.158 0.00 0.00 45.24 4.58
6804 20867 2.579738 GTCTCGGGGTTGAGAGCC 59.420 66.667 0.00 0.00 45.24 4.70
6805 20868 2.182030 CGTCTCGGGGTTGAGAGC 59.818 66.667 0.00 0.00 45.24 4.09
6806 20869 2.182030 GCGTCTCGGGGTTGAGAG 59.818 66.667 0.00 0.00 45.24 3.20
6807 20870 3.744719 CGCGTCTCGGGGTTGAGA 61.745 66.667 0.00 0.00 42.56 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.