Multiple sequence alignment - TraesCS5D01G528600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G528600 chr5D 100.000 5229 0 0 1 5229 545285051 545279823 0.000000e+00 9657.0
1 TraesCS5D01G528600 chr5D 88.865 934 92 11 1985 2915 442674130 442673206 0.000000e+00 1138.0
2 TraesCS5D01G528600 chr5D 88.525 244 26 2 282 524 7947093 7946851 1.420000e-75 294.0
3 TraesCS5D01G528600 chr5D 91.818 110 6 3 3137 3245 279840957 279841064 3.260000e-32 150.0
4 TraesCS5D01G528600 chr5D 90.110 91 8 1 5139 5229 528401405 528401494 3.310000e-22 117.0
5 TraesCS5D01G528600 chr5D 91.667 84 5 2 5147 5229 545279799 545279881 1.190000e-21 115.0
6 TraesCS5D01G528600 chr5D 93.651 63 4 0 520 582 234848205 234848143 1.550000e-15 95.3
7 TraesCS5D01G528600 chr4A 92.087 1605 100 10 3241 4839 624016196 624017779 0.000000e+00 2235.0
8 TraesCS5D01G528600 chr4A 91.983 1372 90 12 283 1648 624013478 624014835 0.000000e+00 1906.0
9 TraesCS5D01G528600 chr4A 87.390 341 26 2 4872 5195 624017775 624018115 4.940000e-100 375.0
10 TraesCS5D01G528600 chr4A 87.542 297 27 5 1 287 624012196 624012492 8.390000e-88 335.0
11 TraesCS5D01G528600 chr4A 87.584 298 26 6 1 287 624012927 624013224 8.390000e-88 335.0
12 TraesCS5D01G528600 chr4A 90.800 250 20 2 2912 3159 624015949 624016197 1.090000e-86 331.0
13 TraesCS5D01G528600 chr4A 94.845 97 3 2 3146 3242 58886778 58886872 3.260000e-32 150.0
14 TraesCS5D01G528600 chrUn 91.345 1606 111 12 3241 4839 338925917 338927501 0.000000e+00 2170.0
15 TraesCS5D01G528600 chrUn 91.220 1606 113 12 3241 4839 1663848 1665432 0.000000e+00 2159.0
16 TraesCS5D01G528600 chrUn 91.220 1606 113 12 3241 4839 1720102 1721686 0.000000e+00 2159.0
17 TraesCS5D01G528600 chrUn 91.158 1606 114 12 3241 4839 189307424 189309008 0.000000e+00 2154.0
18 TraesCS5D01G528600 chrUn 91.852 1436 97 13 3241 4668 316514716 316516139 0.000000e+00 1986.0
19 TraesCS5D01G528600 chrUn 92.698 1301 79 10 3241 4534 409659804 409661095 0.000000e+00 1862.0
20 TraesCS5D01G528600 chrUn 91.781 1168 72 14 569 1724 1716745 1717900 0.000000e+00 1604.0
21 TraesCS5D01G528600 chrUn 91.781 1168 72 14 569 1724 189303632 189304787 0.000000e+00 1604.0
22 TraesCS5D01G528600 chrUn 91.755 1128 69 14 609 1724 386870473 386869358 0.000000e+00 1546.0
23 TraesCS5D01G528600 chrUn 93.322 614 33 6 569 1179 330793761 330793153 0.000000e+00 900.0
24 TraesCS5D01G528600 chrUn 93.322 614 33 6 569 1179 363162026 363161418 0.000000e+00 900.0
25 TraesCS5D01G528600 chrUn 93.322 614 33 6 569 1179 446910474 446911082 0.000000e+00 900.0
26 TraesCS5D01G528600 chrUn 94.828 522 21 4 659 1179 255001810 255001294 0.000000e+00 809.0
27 TraesCS5D01G528600 chrUn 90.235 553 38 8 1181 1724 415803903 415804448 0.000000e+00 708.0
28 TraesCS5D01G528600 chrUn 91.411 489 31 6 3241 3727 398064200 398063721 0.000000e+00 660.0
29 TraesCS5D01G528600 chrUn 80.145 690 131 6 3543 4229 24673422 24674108 1.300000e-140 510.0
30 TraesCS5D01G528600 chrUn 87.977 341 24 2 4872 5195 1721682 1722022 2.280000e-103 387.0
31 TraesCS5D01G528600 chrUn 87.390 341 26 2 4872 5195 1665428 1665768 4.940000e-100 375.0
32 TraesCS5D01G528600 chrUn 87.390 341 26 2 4872 5195 189309004 189309344 4.940000e-100 375.0
33 TraesCS5D01G528600 chrUn 87.390 341 26 2 4872 5195 338927497 338927837 4.940000e-100 375.0
34 TraesCS5D01G528600 chrUn 87.542 297 27 5 1 287 1714054 1714350 8.390000e-88 335.0
35 TraesCS5D01G528600 chrUn 87.755 294 26 5 4 287 255004978 255004685 8.390000e-88 335.0
36 TraesCS5D01G528600 chrUn 87.205 297 28 5 1 287 189301041 189301337 3.900000e-86 329.0
37 TraesCS5D01G528600 chrUn 86.131 274 22 10 1460 1724 449187880 449187614 1.110000e-71 281.0
38 TraesCS5D01G528600 chrUn 86.364 66 4 5 518 581 45996702 45996764 3.380000e-07 67.6
39 TraesCS5D01G528600 chr1A 91.158 1606 114 14 3241 4839 570050204 570051788 0.000000e+00 2154.0
40 TraesCS5D01G528600 chr1A 91.781 1168 72 14 569 1724 570046203 570047358 0.000000e+00 1604.0
41 TraesCS5D01G528600 chr1A 90.614 277 21 1 4872 5143 570051784 570052060 3.850000e-96 363.0
42 TraesCS5D01G528600 chr1A 87.542 297 27 5 1 287 570043515 570043811 8.390000e-88 335.0
43 TraesCS5D01G528600 chr1A 93.548 62 4 0 520 581 380965046 380965107 5.580000e-15 93.5
44 TraesCS5D01G528600 chr1A 94.118 51 3 0 521 571 84272716 84272766 1.560000e-10 78.7
45 TraesCS5D01G528600 chr3B 89.840 935 86 8 1985 2916 548054326 548053398 0.000000e+00 1192.0
46 TraesCS5D01G528600 chr3B 88.581 937 95 11 1985 2916 652963981 652963052 0.000000e+00 1127.0
47 TraesCS5D01G528600 chr3B 94.845 97 4 1 3158 3254 138269219 138269314 3.260000e-32 150.0
48 TraesCS5D01G528600 chr3B 91.667 84 2 3 5146 5229 729387489 729387567 1.540000e-20 111.0
49 TraesCS5D01G528600 chr3B 96.774 62 2 0 520 581 698423955 698423894 2.580000e-18 104.0
50 TraesCS5D01G528600 chr1B 89.434 937 86 11 1986 2917 216105425 216104497 0.000000e+00 1170.0
51 TraesCS5D01G528600 chr1B 94.000 100 4 2 3144 3242 630905909 630905811 3.260000e-32 150.0
52 TraesCS5D01G528600 chr1B 91.566 83 3 2 5147 5229 600973521 600973443 1.540000e-20 111.0
53 TraesCS5D01G528600 chr1B 96.774 62 2 0 520 581 670162630 670162691 2.580000e-18 104.0
54 TraesCS5D01G528600 chr1B 97.778 45 0 1 248 291 5935533 5935577 5.620000e-10 76.8
55 TraesCS5D01G528600 chr1B 95.833 48 1 1 246 292 470898345 470898298 5.620000e-10 76.8
56 TraesCS5D01G528600 chr4D 89.316 936 82 9 1985 2916 375117697 375118618 0.000000e+00 1158.0
57 TraesCS5D01G528600 chr4D 93.548 62 4 0 520 581 124010677 124010738 5.580000e-15 93.5
58 TraesCS5D01G528600 chr4D 93.548 62 3 1 520 581 112074025 112074085 2.010000e-14 91.6
59 TraesCS5D01G528600 chr4D 87.037 54 5 2 536 587 4136749 4136802 5.650000e-05 60.2
60 TraesCS5D01G528600 chr4D 83.871 62 10 0 520 581 310388766 310388827 5.650000e-05 60.2
61 TraesCS5D01G528600 chr6B 88.889 936 90 12 1985 2916 152401385 152400460 0.000000e+00 1140.0
62 TraesCS5D01G528600 chr6B 89.831 59 4 2 247 303 414384403 414384345 2.020000e-09 75.0
63 TraesCS5D01G528600 chr1D 88.877 935 92 10 1986 2917 289773033 289773958 0.000000e+00 1140.0
64 TraesCS5D01G528600 chr1D 95.161 62 3 0 520 581 295442960 295442899 1.200000e-16 99.0
65 TraesCS5D01G528600 chr1D 86.364 66 4 5 518 581 12312506 12312568 3.380000e-07 67.6
66 TraesCS5D01G528600 chr3A 88.770 935 97 7 1986 2917 634579326 634578397 0.000000e+00 1138.0
67 TraesCS5D01G528600 chr3A 88.651 934 90 13 1986 2916 523610937 523610017 0.000000e+00 1123.0
68 TraesCS5D01G528600 chr3A 89.831 118 7 4 3137 3250 750351106 750350990 4.220000e-31 147.0
69 TraesCS5D01G528600 chr5A 88.525 244 25 3 282 524 6147584 6147343 5.120000e-75 292.0
70 TraesCS5D01G528600 chr5A 92.727 55 3 1 235 288 439862822 439862768 1.560000e-10 78.7
71 TraesCS5D01G528600 chr5A 97.826 46 0 1 247 291 464174752 464174797 1.560000e-10 78.7
72 TraesCS5D01G528600 chr7B 89.565 230 23 1 293 522 124340865 124341093 1.840000e-74 291.0
73 TraesCS5D01G528600 chr7B 90.000 90 5 1 5140 5229 198885102 198885187 4.280000e-21 113.0
74 TraesCS5D01G528600 chr7B 97.778 45 0 1 248 291 521580069 521580025 5.620000e-10 76.8
75 TraesCS5D01G528600 chr7B 97.500 40 1 0 1854 1893 80687397 80687358 9.400000e-08 69.4
76 TraesCS5D01G528600 chr6A 87.747 253 26 5 289 538 491581252 491581502 1.840000e-74 291.0
77 TraesCS5D01G528600 chr6A 90.805 87 4 2 5143 5229 268571436 268571354 4.280000e-21 113.0
78 TraesCS5D01G528600 chr6A 89.474 76 5 3 520 593 599808965 599809039 5.580000e-15 93.5
79 TraesCS5D01G528600 chr6A 90.769 65 3 2 521 582 407089252 407089316 3.360000e-12 84.2
80 TraesCS5D01G528600 chr6A 88.060 67 3 5 518 582 396295106 396295169 2.020000e-09 75.0
81 TraesCS5D01G528600 chr7D 87.917 240 27 2 284 522 599715971 599716209 1.110000e-71 281.0
82 TraesCS5D01G528600 chr4B 87.967 241 26 3 283 522 458456459 458456697 1.110000e-71 281.0
83 TraesCS5D01G528600 chr4B 82.680 306 43 10 276 576 419822025 419822325 4.020000e-66 263.0
84 TraesCS5D01G528600 chr4B 95.312 64 3 0 521 584 363642654 363642591 9.260000e-18 102.0
85 TraesCS5D01G528600 chr4B 95.161 62 3 0 520 581 103235257 103235318 1.200000e-16 99.0
86 TraesCS5D01G528600 chr2D 84.871 271 32 8 284 548 332489961 332489694 1.120000e-66 265.0
87 TraesCS5D01G528600 chr2D 90.805 87 3 3 5144 5229 206682761 206682679 1.540000e-20 111.0
88 TraesCS5D01G528600 chr2D 89.011 91 5 3 5140 5229 178280723 178280809 1.990000e-19 108.0
89 TraesCS5D01G528600 chr2D 95.161 62 3 0 521 582 478115516 478115455 1.200000e-16 99.0
90 TraesCS5D01G528600 chr5B 94.949 99 4 1 3152 3250 289565424 289565521 2.520000e-33 154.0
91 TraesCS5D01G528600 chr5B 95.161 62 3 0 521 582 316712641 316712702 1.200000e-16 99.0
92 TraesCS5D01G528600 chr5B 92.537 67 5 0 520 586 352488680 352488614 4.310000e-16 97.1
93 TraesCS5D01G528600 chr3D 92.308 104 6 2 3157 3259 583868988 583869090 4.220000e-31 147.0
94 TraesCS5D01G528600 chr3D 89.062 64 3 4 228 288 582933378 582933440 5.620000e-10 76.8
95 TraesCS5D01G528600 chr3D 87.500 64 4 4 228 288 582927842 582927904 2.610000e-08 71.3
96 TraesCS5D01G528600 chr2A 91.509 106 7 2 3140 3245 569281172 569281069 1.520000e-30 145.0
97 TraesCS5D01G528600 chr2A 85.401 137 15 5 3141 3274 127204775 127204641 2.540000e-28 137.0
98 TraesCS5D01G528600 chr6D 92.222 90 3 1 5140 5229 467773468 467773553 1.980000e-24 124.0
99 TraesCS5D01G528600 chr6D 87.879 66 3 5 518 581 68866181 68866243 7.260000e-09 73.1
100 TraesCS5D01G528600 chr6D 87.500 64 3 5 520 581 321761807 321761747 9.400000e-08 69.4
101 TraesCS5D01G528600 chr2B 95.833 48 1 1 245 291 382599097 382599050 5.620000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G528600 chr5D 545279823 545285051 5228 True 9657.00 9657 100.000000 1 5229 1 chr5D.!!$R4 5228
1 TraesCS5D01G528600 chr5D 442673206 442674130 924 True 1138.00 1138 88.865000 1985 2915 1 chr5D.!!$R3 930
2 TraesCS5D01G528600 chr4A 624012196 624018115 5919 False 919.50 2235 89.564333 1 5195 6 chr4A.!!$F2 5194
3 TraesCS5D01G528600 chrUn 316514716 316516139 1423 False 1986.00 1986 91.852000 3241 4668 1 chrUn.!!$F3 1427
4 TraesCS5D01G528600 chrUn 409659804 409661095 1291 False 1862.00 1862 92.698000 3241 4534 1 chrUn.!!$F4 1293
5 TraesCS5D01G528600 chrUn 386869358 386870473 1115 True 1546.00 1546 91.755000 609 1724 1 chrUn.!!$R3 1115
6 TraesCS5D01G528600 chrUn 338925917 338927837 1920 False 1272.50 2170 89.367500 3241 5195 2 chrUn.!!$F10 1954
7 TraesCS5D01G528600 chrUn 1663848 1665768 1920 False 1267.00 2159 89.305000 3241 5195 2 chrUn.!!$F7 1954
8 TraesCS5D01G528600 chrUn 1714054 1722022 7968 False 1121.25 2159 89.630000 1 5195 4 chrUn.!!$F8 5194
9 TraesCS5D01G528600 chrUn 189301041 189309344 8303 False 1115.50 2154 89.383500 1 5195 4 chrUn.!!$F9 5194
10 TraesCS5D01G528600 chrUn 330793153 330793761 608 True 900.00 900 93.322000 569 1179 1 chrUn.!!$R1 610
11 TraesCS5D01G528600 chrUn 363161418 363162026 608 True 900.00 900 93.322000 569 1179 1 chrUn.!!$R2 610
12 TraesCS5D01G528600 chrUn 446910474 446911082 608 False 900.00 900 93.322000 569 1179 1 chrUn.!!$F6 610
13 TraesCS5D01G528600 chrUn 415803903 415804448 545 False 708.00 708 90.235000 1181 1724 1 chrUn.!!$F5 543
14 TraesCS5D01G528600 chrUn 255001294 255004978 3684 True 572.00 809 91.291500 4 1179 2 chrUn.!!$R6 1175
15 TraesCS5D01G528600 chrUn 24673422 24674108 686 False 510.00 510 80.145000 3543 4229 1 chrUn.!!$F1 686
16 TraesCS5D01G528600 chr1A 570043515 570052060 8545 False 1114.00 2154 90.273750 1 5143 4 chr1A.!!$F3 5142
17 TraesCS5D01G528600 chr3B 548053398 548054326 928 True 1192.00 1192 89.840000 1985 2916 1 chr3B.!!$R1 931
18 TraesCS5D01G528600 chr3B 652963052 652963981 929 True 1127.00 1127 88.581000 1985 2916 1 chr3B.!!$R2 931
19 TraesCS5D01G528600 chr1B 216104497 216105425 928 True 1170.00 1170 89.434000 1986 2917 1 chr1B.!!$R1 931
20 TraesCS5D01G528600 chr4D 375117697 375118618 921 False 1158.00 1158 89.316000 1985 2916 1 chr4D.!!$F5 931
21 TraesCS5D01G528600 chr6B 152400460 152401385 925 True 1140.00 1140 88.889000 1985 2916 1 chr6B.!!$R1 931
22 TraesCS5D01G528600 chr1D 289773033 289773958 925 False 1140.00 1140 88.877000 1986 2917 1 chr1D.!!$F2 931
23 TraesCS5D01G528600 chr3A 634578397 634579326 929 True 1138.00 1138 88.770000 1986 2917 1 chr3A.!!$R2 931
24 TraesCS5D01G528600 chr3A 523610017 523610937 920 True 1123.00 1123 88.651000 1986 2916 1 chr3A.!!$R1 930

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
692 4176 0.602638 TTTGCAGCCGGTGACTACAG 60.603 55.0 1.90 0.00 0.0 2.74 F
1279 4763 0.104304 AGTGTTGTGTGAGGTCGACC 59.896 55.0 27.67 27.67 0.0 4.79 F
1789 5281 1.107945 CCCTCCTTCGTTCCTCTCTC 58.892 60.0 0.00 0.00 0.0 3.20 F
2943 8787 0.736053 GGTACTCGACTGCTCTCCTG 59.264 60.0 0.00 0.00 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1896 5398 1.024271 ATGGCACGTGATACAATGGC 58.976 50.0 22.23 1.84 38.08 4.40 R
2698 8434 0.881118 CACCTGATTTTGACGGGGTG 59.119 55.0 0.00 0.00 38.04 4.61 R
3334 9180 0.861837 GGAGAGATATTGTTGGCGCG 59.138 55.0 0.00 0.00 0.00 6.86 R
4555 10408 0.036732 ATCACGTGGTTGATGGCTGT 59.963 50.0 17.00 0.00 34.79 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 88 5.522456 TGCAATGACAAGACAACTGAAATC 58.478 37.500 0.00 0.00 0.00 2.17
92 93 6.757897 TGACAAGACAACTGAAATCAAACT 57.242 33.333 0.00 0.00 0.00 2.66
125 126 9.445786 CAACAAATACGACACTTGAAGTAAATT 57.554 29.630 0.00 0.00 0.00 1.82
194 195 8.547481 TGTGACTCATGAGGGTTATATTCTAA 57.453 34.615 26.08 2.98 0.00 2.10
195 196 8.421784 TGTGACTCATGAGGGTTATATTCTAAC 58.578 37.037 26.08 5.55 0.00 2.34
196 197 8.643324 GTGACTCATGAGGGTTATATTCTAACT 58.357 37.037 26.08 0.00 0.00 2.24
204 215 7.889073 TGAGGGTTATATTCTAACTCGCTATCT 59.111 37.037 1.48 0.00 33.36 1.98
210 221 7.768807 ATATTCTAACTCGCTATCTCCAACT 57.231 36.000 0.00 0.00 0.00 3.16
217 228 5.302360 ACTCGCTATCTCCAACTACTCTAG 58.698 45.833 0.00 0.00 0.00 2.43
218 229 4.066490 TCGCTATCTCCAACTACTCTAGC 58.934 47.826 0.00 0.00 0.00 3.42
221 232 4.996122 GCTATCTCCAACTACTCTAGCGTA 59.004 45.833 0.00 0.00 0.00 4.42
236 247 8.447924 ACTCTAGCGTAATATTGAACTAGTCA 57.552 34.615 14.82 0.00 0.00 3.41
252 263 8.577296 TGAACTAGTCATACAATGCTATACTCC 58.423 37.037 0.00 0.00 0.00 3.85
253 264 7.469537 ACTAGTCATACAATGCTATACTCCC 57.530 40.000 0.00 0.00 0.00 4.30
255 266 6.597832 AGTCATACAATGCTATACTCCCTC 57.402 41.667 0.00 0.00 0.00 4.30
256 267 5.482175 AGTCATACAATGCTATACTCCCTCC 59.518 44.000 0.00 0.00 0.00 4.30
275 286 4.865365 CCTCCGTCTCAAAATAAGTGTCTC 59.135 45.833 0.00 0.00 0.00 3.36
295 1297 5.575995 GTCTCAATTTTGTACTACTCCGTCC 59.424 44.000 0.00 0.00 0.00 4.79
298 1300 5.244402 TCAATTTTGTACTACTCCGTCCTGA 59.756 40.000 0.00 0.00 0.00 3.86
310 1312 5.209659 ACTCCGTCCTGATTTATTAGTCCT 58.790 41.667 0.00 0.00 0.00 3.85
311 1313 6.371278 ACTCCGTCCTGATTTATTAGTCCTA 58.629 40.000 0.00 0.00 0.00 2.94
332 1334 8.998377 GTCCTATTTGTATTTTGTGCCAAATTT 58.002 29.630 0.00 0.00 38.23 1.82
438 1441 7.700234 TCAACGATATAATTTTTGGTGACATGC 59.300 33.333 0.00 0.00 42.32 4.06
439 1442 6.198687 ACGATATAATTTTTGGTGACATGCG 58.801 36.000 0.00 0.00 42.32 4.73
497 1500 9.863845 AATTTTAACATAAAATACAACGGGGAG 57.136 29.630 8.13 0.00 30.38 4.30
505 1508 9.940166 CATAAAATACAACGGGGAGTTATAAAC 57.060 33.333 0.00 0.00 42.02 2.01
506 1509 7.395190 AAAATACAACGGGGAGTTATAAACC 57.605 36.000 0.00 0.00 42.02 3.27
507 1510 5.697082 ATACAACGGGGAGTTATAAACCA 57.303 39.130 10.72 0.00 42.02 3.67
508 1511 3.946606 ACAACGGGGAGTTATAAACCAG 58.053 45.455 10.72 6.53 42.02 4.00
509 1512 3.275999 CAACGGGGAGTTATAAACCAGG 58.724 50.000 10.72 0.00 42.02 4.45
510 1513 2.836667 ACGGGGAGTTATAAACCAGGA 58.163 47.619 0.00 0.00 0.00 3.86
511 1514 3.390819 ACGGGGAGTTATAAACCAGGAT 58.609 45.455 0.00 0.00 0.00 3.24
519 1522 7.217906 GGAGTTATAAACCAGGATGAAGGTAG 58.782 42.308 0.00 0.00 39.69 3.18
526 1529 6.541934 AACCAGGATGAAGGTAGTACTAAC 57.458 41.667 10.12 10.12 39.69 2.34
531 1534 8.755977 CCAGGATGAAGGTAGTACTAACTTTAA 58.244 37.037 29.30 21.84 42.67 1.52
575 3679 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
576 3680 2.640826 ACACTTATTTTGGGACGGAGGA 59.359 45.455 0.00 0.00 0.00 3.71
606 3710 2.353357 TACCATAGTCACGGGTCGAT 57.647 50.000 0.00 0.00 36.14 3.59
617 3721 4.209288 GTCACGGGTCGATATTTGATGAAG 59.791 45.833 0.00 0.00 0.00 3.02
624 3728 5.468072 GGTCGATATTTGATGAAGTGCTGAT 59.532 40.000 0.00 0.00 0.00 2.90
657 4139 6.533819 TTGATTAGTTTTACACCGTGTCAG 57.466 37.500 7.63 0.00 0.00 3.51
661 4145 4.067972 AGTTTTACACCGTGTCAGTCAT 57.932 40.909 7.63 0.00 0.00 3.06
692 4176 0.602638 TTTGCAGCCGGTGACTACAG 60.603 55.000 1.90 0.00 0.00 2.74
712 4196 9.826574 ACTACAGATTTACTTAACAAACACTCA 57.173 29.630 0.00 0.00 0.00 3.41
726 4210 5.105554 ACAAACACTCACAAAAGCCATTACA 60.106 36.000 0.00 0.00 0.00 2.41
731 4215 6.534793 ACACTCACAAAAGCCATTACAAAAAG 59.465 34.615 0.00 0.00 0.00 2.27
746 4230 5.784578 ACAAAAAGGCCGTTCTAAAGAAT 57.215 34.783 3.79 0.00 36.33 2.40
750 4234 7.013942 ACAAAAAGGCCGTTCTAAAGAATTACT 59.986 33.333 3.79 0.00 36.33 2.24
792 4276 7.391554 TCTCCAACAACTACGTACTGTAATACT 59.608 37.037 6.09 0.00 31.20 2.12
813 4297 1.832883 AATTTGTCATACGGCAGGCA 58.167 45.000 0.00 0.00 0.00 4.75
860 4344 9.061610 GGTGAACTGTTGATAACAAATAATTCG 57.938 33.333 0.00 0.00 41.61 3.34
863 4347 8.673626 AACTGTTGATAACAAATAATTCGCTG 57.326 30.769 0.00 0.00 41.61 5.18
868 4352 5.883115 TGATAACAAATAATTCGCTGGTCCA 59.117 36.000 0.00 0.00 0.00 4.02
942 4426 7.069877 TCCTAAACTAGCTAAGAAAACCACA 57.930 36.000 0.00 0.00 0.00 4.17
944 4428 7.443272 TCCTAAACTAGCTAAGAAAACCACAAC 59.557 37.037 0.00 0.00 0.00 3.32
946 4430 5.306114 ACTAGCTAAGAAAACCACAACCT 57.694 39.130 0.00 0.00 0.00 3.50
1073 4557 4.817063 CGCGATGCAACTTGCCGG 62.817 66.667 11.29 0.00 44.23 6.13
1076 4560 2.568090 GATGCAACTTGCCGGTGG 59.432 61.111 11.29 0.00 44.23 4.61
1131 4615 2.513204 CTGGGCATGCTCGAGGTG 60.513 66.667 18.92 0.00 0.00 4.00
1179 4663 2.115291 GCCTTCGGAGGTGATTGCC 61.115 63.158 12.53 0.00 45.44 4.52
1248 4732 4.100084 ATACTGCGGCTGCTGGCA 62.100 61.111 25.86 14.84 43.66 4.92
1257 4741 0.666913 GGCTGCTGGCATCATACAAG 59.333 55.000 12.45 0.00 44.01 3.16
1279 4763 0.104304 AGTGTTGTGTGAGGTCGACC 59.896 55.000 27.67 27.67 0.00 4.79
1352 4836 3.637273 GCTCACCCCCAACGAGGT 61.637 66.667 0.00 0.00 36.58 3.85
1368 4852 1.194781 AGGTCGGTGTCTCCATTGCT 61.195 55.000 0.00 0.00 35.57 3.91
1380 4864 1.156645 CCATTGCTGCGCTAGTCCTC 61.157 60.000 9.73 0.00 0.00 3.71
1422 4906 1.303643 GGAGGGCTGGTGAGTTTGG 60.304 63.158 0.00 0.00 0.00 3.28
1444 4928 8.475331 TTGGTCGTTATTTTCTCAAGACTATC 57.525 34.615 0.00 0.00 0.00 2.08
1452 4936 6.467723 TTTTCTCAAGACTATCGTGCTTTC 57.532 37.500 0.00 0.00 0.00 2.62
1479 4963 4.461198 TGTTTTTCTCTTCCACTCTTCCC 58.539 43.478 0.00 0.00 0.00 3.97
1505 4989 5.163437 ACCTTTCGGTGTCTATCATTCTACC 60.163 44.000 0.00 0.00 43.51 3.18
1509 4993 7.591421 TTCGGTGTCTATCATTCTACCAATA 57.409 36.000 0.00 0.00 0.00 1.90
1510 4994 6.978338 TCGGTGTCTATCATTCTACCAATAC 58.022 40.000 0.00 0.00 0.00 1.89
1511 4995 6.548251 TCGGTGTCTATCATTCTACCAATACA 59.452 38.462 0.00 0.00 0.00 2.29
1512 4996 7.232737 TCGGTGTCTATCATTCTACCAATACAT 59.767 37.037 0.00 0.00 0.00 2.29
1513 4997 7.872993 CGGTGTCTATCATTCTACCAATACATT 59.127 37.037 0.00 0.00 0.00 2.71
1514 4998 9.561069 GGTGTCTATCATTCTACCAATACATTT 57.439 33.333 0.00 0.00 0.00 2.32
1554 5038 8.732746 ACTAAGTGTTAAACTCAACAGTGAAT 57.267 30.769 0.00 0.00 40.39 2.57
1596 5080 8.131100 CAGTTGATGTCAATATATGGTGTTTCC 58.869 37.037 0.00 0.00 38.24 3.13
1612 5096 6.721668 TGGTGTTTCCATTCCATACAATGTTA 59.278 34.615 0.00 0.00 41.93 2.41
1649 5134 8.142994 AGGTCATATTAATTAGCTTTGACACG 57.857 34.615 15.72 0.00 35.00 4.49
1650 5135 7.226720 AGGTCATATTAATTAGCTTTGACACGG 59.773 37.037 15.72 0.00 35.00 4.94
1654 5139 6.920569 ATTAATTAGCTTTGACACGGTAGG 57.079 37.500 0.00 0.00 0.00 3.18
1659 5148 2.159282 AGCTTTGACACGGTAGGATACG 60.159 50.000 0.00 0.00 44.28 3.06
1660 5149 2.190981 CTTTGACACGGTAGGATACGC 58.809 52.381 0.00 0.00 44.28 4.42
1694 5186 6.016527 ACAAGATGGTATGCATCACAATGATC 60.017 38.462 0.19 0.00 34.28 2.92
1701 5193 1.607628 GCATCACAATGATCCAGAGGC 59.392 52.381 0.00 0.00 34.28 4.70
1703 5195 1.288188 TCACAATGATCCAGAGGCCA 58.712 50.000 5.01 0.00 0.00 5.36
1715 5207 1.284785 CAGAGGCCAGGGTTTATTCCA 59.715 52.381 5.01 0.00 0.00 3.53
1717 5209 2.587307 AGAGGCCAGGGTTTATTCCAAT 59.413 45.455 5.01 0.00 0.00 3.16
1721 5213 4.601420 AGGCCAGGGTTTATTCCAATTTTT 59.399 37.500 5.01 0.00 0.00 1.94
1722 5214 4.699735 GGCCAGGGTTTATTCCAATTTTTG 59.300 41.667 0.00 0.00 0.00 2.44
1723 5215 5.513962 GGCCAGGGTTTATTCCAATTTTTGA 60.514 40.000 0.00 0.00 0.00 2.69
1725 5217 6.488344 GCCAGGGTTTATTCCAATTTTTGAAA 59.512 34.615 0.00 0.00 0.00 2.69
1726 5218 7.308529 GCCAGGGTTTATTCCAATTTTTGAAAG 60.309 37.037 0.00 0.00 0.00 2.62
1727 5219 7.936301 CCAGGGTTTATTCCAATTTTTGAAAGA 59.064 33.333 0.00 0.00 0.00 2.52
1729 5221 9.913310 AGGGTTTATTCCAATTTTTGAAAGAAA 57.087 25.926 0.00 0.00 0.00 2.52
1732 5224 9.663904 GTTTATTCCAATTTTTGAAAGAAAGCC 57.336 29.630 0.00 0.00 0.00 4.35
1735 5227 5.939447 TCCAATTTTTGAAAGAAAGCCCAT 58.061 33.333 0.00 0.00 0.00 4.00
1737 5229 7.688343 TCCAATTTTTGAAAGAAAGCCCATAT 58.312 30.769 0.00 0.00 0.00 1.78
1739 5231 9.617523 CCAATTTTTGAAAGAAAGCCCATATAT 57.382 29.630 0.00 0.00 0.00 0.86
1746 5238 9.528489 TTGAAAGAAAGCCCATATATATAACCC 57.472 33.333 0.00 0.00 0.00 4.11
1747 5239 7.827236 TGAAAGAAAGCCCATATATATAACCCG 59.173 37.037 0.00 0.00 0.00 5.28
1749 5241 7.504926 AGAAAGCCCATATATATAACCCGAA 57.495 36.000 0.00 0.00 0.00 4.30
1751 5243 8.557450 AGAAAGCCCATATATATAACCCGAAAT 58.443 33.333 0.00 0.00 0.00 2.17
1752 5244 9.185680 GAAAGCCCATATATATAACCCGAAATT 57.814 33.333 0.00 0.00 0.00 1.82
1753 5245 8.519799 AAGCCCATATATATAACCCGAAATTG 57.480 34.615 0.00 0.00 0.00 2.32
1776 5268 7.510675 TGACAAAAGATTATCTTACCCTCCT 57.489 36.000 7.98 0.00 35.27 3.69
1779 5271 7.048512 ACAAAAGATTATCTTACCCTCCTTCG 58.951 38.462 7.98 0.00 35.27 3.79
1780 5272 6.809976 AAAGATTATCTTACCCTCCTTCGT 57.190 37.500 7.98 0.00 35.27 3.85
1784 5276 2.617840 TCTTACCCTCCTTCGTTCCT 57.382 50.000 0.00 0.00 0.00 3.36
1786 5278 2.042706 TCTTACCCTCCTTCGTTCCTCT 59.957 50.000 0.00 0.00 0.00 3.69
1789 5281 1.107945 CCCTCCTTCGTTCCTCTCTC 58.892 60.000 0.00 0.00 0.00 3.20
1790 5282 1.341581 CCCTCCTTCGTTCCTCTCTCT 60.342 57.143 0.00 0.00 0.00 3.10
1791 5283 2.021457 CCTCCTTCGTTCCTCTCTCTC 58.979 57.143 0.00 0.00 0.00 3.20
1792 5284 2.356741 CCTCCTTCGTTCCTCTCTCTCT 60.357 54.545 0.00 0.00 0.00 3.10
1793 5285 2.943033 CTCCTTCGTTCCTCTCTCTCTC 59.057 54.545 0.00 0.00 0.00 3.20
1794 5286 2.574369 TCCTTCGTTCCTCTCTCTCTCT 59.426 50.000 0.00 0.00 0.00 3.10
1795 5287 2.943033 CCTTCGTTCCTCTCTCTCTCTC 59.057 54.545 0.00 0.00 0.00 3.20
1796 5288 3.370527 CCTTCGTTCCTCTCTCTCTCTCT 60.371 52.174 0.00 0.00 0.00 3.10
1797 5289 3.536956 TCGTTCCTCTCTCTCTCTCTC 57.463 52.381 0.00 0.00 0.00 3.20
1798 5290 3.104512 TCGTTCCTCTCTCTCTCTCTCT 58.895 50.000 0.00 0.00 0.00 3.10
1799 5291 3.132289 TCGTTCCTCTCTCTCTCTCTCTC 59.868 52.174 0.00 0.00 0.00 3.20
1800 5292 3.133003 CGTTCCTCTCTCTCTCTCTCTCT 59.867 52.174 0.00 0.00 0.00 3.10
1801 5293 4.698575 GTTCCTCTCTCTCTCTCTCTCTC 58.301 52.174 0.00 0.00 0.00 3.20
1802 5294 4.271807 TCCTCTCTCTCTCTCTCTCTCT 57.728 50.000 0.00 0.00 0.00 3.10
1803 5295 4.219115 TCCTCTCTCTCTCTCTCTCTCTC 58.781 52.174 0.00 0.00 0.00 3.20
1804 5296 4.078922 TCCTCTCTCTCTCTCTCTCTCTCT 60.079 50.000 0.00 0.00 0.00 3.10
1805 5297 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
1806 5298 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
1807 5299 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1808 5300 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1809 5301 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1810 5302 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1811 5303 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1812 5304 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1813 5305 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1814 5306 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1815 5307 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1816 5308 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1817 5309 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1818 5310 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1824 5316 4.223953 TCTCTCTCTCTCTCTCTACCCTC 58.776 52.174 0.00 0.00 0.00 4.30
1838 5330 8.282982 TCTCTCTACCCTCTATGAACAGTAAAT 58.717 37.037 0.00 0.00 0.00 1.40
1842 5334 9.042450 TCTACCCTCTATGAACAGTAAATTCAA 57.958 33.333 0.00 0.00 39.43 2.69
1887 5389 2.760092 ACTTTGCGGCATCAAATATGGT 59.240 40.909 2.28 0.00 35.64 3.55
1891 5393 2.757314 TGCGGCATCAAATATGGTCAAA 59.243 40.909 0.00 0.00 0.00 2.69
1892 5394 3.115554 GCGGCATCAAATATGGTCAAAC 58.884 45.455 0.00 0.00 0.00 2.93
1896 5398 5.111293 GGCATCAAATATGGTCAAACTTGG 58.889 41.667 0.00 0.00 0.00 3.61
1897 5399 4.567959 GCATCAAATATGGTCAAACTTGGC 59.432 41.667 0.00 0.00 0.00 4.52
1923 6333 1.761449 ATCACGTGCCATATTTGCCA 58.239 45.000 11.67 0.00 0.00 4.92
1929 6339 5.532779 TCACGTGCCATATTTGCCATATTTA 59.467 36.000 11.67 0.00 0.00 1.40
1933 6343 7.393234 ACGTGCCATATTTGCCATATTTACTAT 59.607 33.333 0.00 0.00 0.00 2.12
2000 6411 6.903340 ACAAATATACTAGAAGGGTTGGGT 57.097 37.500 0.00 0.00 0.00 4.51
2020 6431 4.326766 GCTTTGCTGCGCCGTTGA 62.327 61.111 4.18 0.00 0.00 3.18
2041 6452 8.682016 CGTTGATGTTGTTGAGATTCTTAAAAC 58.318 33.333 0.00 2.20 0.00 2.43
2353 6986 7.442969 AGACGATGGAGTGTGTTTTATGTTTAA 59.557 33.333 0.00 0.00 0.00 1.52
2463 7171 5.443185 TTCGGTGGCTACATGTACTATAC 57.557 43.478 0.08 0.00 0.00 1.47
2480 7188 9.445878 TGTACTATACTGGTGCTATAGTATCAC 57.554 37.037 0.00 0.38 39.87 3.06
2563 8272 1.135402 GCCGGTTGGTGTTGATTCATC 60.135 52.381 1.90 0.00 37.67 2.92
2578 8288 6.573664 TGATTCATCTGAAAAATCGTTGGT 57.426 33.333 0.00 0.00 37.61 3.67
2698 8434 8.425577 TGGAAGAGATCGTTGAGAAATTATTC 57.574 34.615 0.00 0.00 35.70 1.75
2703 8439 5.823045 AGATCGTTGAGAAATTATTCACCCC 59.177 40.000 0.00 0.00 38.06 4.95
2731 8467 7.340743 TCAAAATCAGGTGACCAAGTTCTAAAA 59.659 33.333 3.63 0.00 0.00 1.52
2732 8468 6.635030 AATCAGGTGACCAAGTTCTAAAAC 57.365 37.500 3.63 0.00 35.50 2.43
2773 8509 8.392372 AGTTGTGAGGACTTAAAAATTAGGAC 57.608 34.615 0.00 0.00 0.00 3.85
2774 8510 7.447545 AGTTGTGAGGACTTAAAAATTAGGACC 59.552 37.037 0.00 0.00 0.00 4.46
2845 8689 2.226330 CTTGGTCAAAATCGGGTGACA 58.774 47.619 6.18 0.00 44.89 3.58
2846 8690 2.577606 TGGTCAAAATCGGGTGACAT 57.422 45.000 6.18 0.00 44.89 3.06
2863 8707 7.362574 CGGGTGACATAATTTTAATTGGACACT 60.363 37.037 15.77 0.00 34.13 3.55
2885 8729 4.789012 TCAATTGATTGTGAGGCCTTTC 57.211 40.909 6.77 3.63 38.84 2.62
2932 8776 2.457598 AGATTCAGCTTGGGTACTCGA 58.542 47.619 0.00 0.00 0.00 4.04
2943 8787 0.736053 GGTACTCGACTGCTCTCCTG 59.264 60.000 0.00 0.00 0.00 3.86
2950 8794 1.879796 CGACTGCTCTCCTGGCTTTTT 60.880 52.381 0.00 0.00 0.00 1.94
2987 8831 2.605837 TTGACAACCGTACTGCTCAA 57.394 45.000 0.00 0.00 0.00 3.02
2988 8832 1.860676 TGACAACCGTACTGCTCAAC 58.139 50.000 0.00 0.00 0.00 3.18
3000 8844 4.026356 ACTGCTCAACTATCTTGCCTTT 57.974 40.909 0.00 0.00 0.00 3.11
3003 8847 5.645497 ACTGCTCAACTATCTTGCCTTTTAG 59.355 40.000 0.00 0.00 0.00 1.85
3029 8873 0.919710 ATAGGAACCTGGTTGCTCCC 59.080 55.000 32.81 19.75 39.96 4.30
3037 8881 2.250924 CCTGGTTGCTCCCAATTTCTT 58.749 47.619 0.00 0.00 33.07 2.52
3058 8902 7.411486 TCTTAAACAAATTGAACCCTTGTCA 57.589 32.000 0.00 0.00 32.21 3.58
3092 8936 9.834628 TTGAGGCTTGTAATATTTTTAACGAAG 57.165 29.630 0.00 0.00 0.00 3.79
3170 9016 9.810870 ATATAATAATAGATACTCCCTCCGTCC 57.189 37.037 0.00 0.00 0.00 4.79
3171 9017 2.903375 ATAGATACTCCCTCCGTCCC 57.097 55.000 0.00 0.00 0.00 4.46
3172 9018 1.526315 TAGATACTCCCTCCGTCCCA 58.474 55.000 0.00 0.00 0.00 4.37
3173 9019 0.861155 AGATACTCCCTCCGTCCCAT 59.139 55.000 0.00 0.00 0.00 4.00
3174 9020 2.071372 AGATACTCCCTCCGTCCCATA 58.929 52.381 0.00 0.00 0.00 2.74
3175 9021 2.449730 AGATACTCCCTCCGTCCCATAA 59.550 50.000 0.00 0.00 0.00 1.90
3176 9022 3.077695 AGATACTCCCTCCGTCCCATAAT 59.922 47.826 0.00 0.00 0.00 1.28
3177 9023 4.294168 AGATACTCCCTCCGTCCCATAATA 59.706 45.833 0.00 0.00 0.00 0.98
3178 9024 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3179 9025 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3180 9026 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3181 9027 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3182 9028 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3183 9029 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
3184 9030 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
3185 9031 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
3186 9032 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
3187 9033 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
3188 9034 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
3189 9035 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
3190 9036 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
3191 9037 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
3192 9038 7.853929 CGTCCCATAATATAAGAACGTTTTTGG 59.146 37.037 13.87 5.54 0.00 3.28
3193 9039 7.646526 GTCCCATAATATAAGAACGTTTTTGGC 59.353 37.037 13.87 0.00 0.00 4.52
3194 9040 7.339721 TCCCATAATATAAGAACGTTTTTGGCA 59.660 33.333 13.87 0.01 0.00 4.92
3195 9041 7.434013 CCCATAATATAAGAACGTTTTTGGCAC 59.566 37.037 13.87 0.00 0.00 5.01
3196 9042 8.188139 CCATAATATAAGAACGTTTTTGGCACT 58.812 33.333 13.87 0.00 0.00 4.40
3201 9047 7.916914 ATAAGAACGTTTTTGGCACTATACT 57.083 32.000 13.87 0.00 0.00 2.12
3203 9049 6.963049 AGAACGTTTTTGGCACTATACTAG 57.037 37.500 0.46 0.00 0.00 2.57
3204 9050 6.461640 AGAACGTTTTTGGCACTATACTAGT 58.538 36.000 0.46 0.00 40.28 2.57
3245 9091 2.233305 TGGGACAGAGGGAGTAGTTC 57.767 55.000 0.00 0.00 0.00 3.01
3311 9157 4.868067 TGACTTCCGACTTTAGTTCTGAC 58.132 43.478 0.00 0.00 0.00 3.51
3334 9180 3.010420 GTTTAGTCTGGCTTGTGATCCC 58.990 50.000 0.00 0.00 0.00 3.85
3344 9190 3.053291 GTGATCCCGCGCCAACAA 61.053 61.111 0.00 0.00 0.00 2.83
3350 9196 0.531974 TCCCGCGCCAACAATATCTC 60.532 55.000 0.00 0.00 0.00 2.75
3352 9198 0.861837 CCGCGCCAACAATATCTCTC 59.138 55.000 0.00 0.00 0.00 3.20
3414 9260 5.407995 TGCAAAACTTGAAACTTTGACCAAG 59.592 36.000 0.00 0.00 41.12 3.61
3418 9264 4.600062 ACTTGAAACTTTGACCAAGGTCT 58.400 39.130 19.20 0.00 44.80 3.85
3420 9266 5.823045 ACTTGAAACTTTGACCAAGGTCTAG 59.177 40.000 19.20 17.13 44.80 2.43
3432 9278 6.012157 TGACCAAGGTCTAGGTACTAACTAGT 60.012 42.308 19.20 0.00 42.17 2.57
3516 9364 4.464008 CATGCCACCATTACTCCACTATT 58.536 43.478 0.00 0.00 0.00 1.73
3518 9366 5.031066 TGCCACCATTACTCCACTATTAC 57.969 43.478 0.00 0.00 0.00 1.89
3519 9367 4.719773 TGCCACCATTACTCCACTATTACT 59.280 41.667 0.00 0.00 0.00 2.24
3520 9368 5.190925 TGCCACCATTACTCCACTATTACTT 59.809 40.000 0.00 0.00 0.00 2.24
3533 9381 8.827177 TCCACTATTACTTGTAAACTGAACTG 57.173 34.615 0.00 0.00 0.00 3.16
3534 9382 7.386848 TCCACTATTACTTGTAAACTGAACTGC 59.613 37.037 0.00 0.00 0.00 4.40
3613 9461 0.373716 CGTTCCAAAGAGCATACGGC 59.626 55.000 0.00 0.00 45.30 5.68
3667 9515 2.667171 GCACGTTAACCGCATGTTCAAT 60.667 45.455 9.24 0.00 41.42 2.57
3808 9656 0.907704 TCACCTCCAAGTACCCGCAT 60.908 55.000 0.00 0.00 0.00 4.73
3853 9701 1.138859 CCCCACGTTATCTCTGATGCA 59.861 52.381 0.00 0.00 0.00 3.96
3907 9755 0.396435 ACATGTTCGAGAAGGTGCCA 59.604 50.000 0.00 0.00 0.00 4.92
3982 9830 5.352284 CATTGCACGACTCTACTAAGGAAT 58.648 41.667 0.00 0.00 0.00 3.01
4083 9931 1.210478 GGGGCAGCTGATGTTCTTAGA 59.790 52.381 20.43 0.00 0.00 2.10
4177 10025 0.314935 GTGCAGGGTTCACCAATGTG 59.685 55.000 0.00 0.00 43.89 3.21
4261 10109 6.613755 TTGTTTTCTAGTTGTTGCTCCTAC 57.386 37.500 0.00 0.00 0.00 3.18
4270 10118 3.719268 TGTTGCTCCTACAATCCACAT 57.281 42.857 0.00 0.00 0.00 3.21
4280 10128 7.194112 TCCTACAATCCACATATGACTTTCA 57.806 36.000 10.38 0.00 0.00 2.69
4283 10131 6.199937 ACAATCCACATATGACTTTCAAGC 57.800 37.500 10.38 0.00 0.00 4.01
4293 10141 4.265904 TGACTTTCAAGCTTCCATCGTA 57.734 40.909 0.00 0.00 0.00 3.43
4361 10209 5.250200 AGGATTTGGTATTTAAGTCGTGCA 58.750 37.500 0.00 0.00 0.00 4.57
4451 10299 3.120752 CGCATATAGAGCACATCAAGCAC 60.121 47.826 1.51 0.00 0.00 4.40
4461 10309 6.007936 AGCACATCAAGCACGTTTATTTTA 57.992 33.333 0.00 0.00 0.00 1.52
4496 10349 6.875948 TGAACAGTGTTGTGCTATGTTTAT 57.124 33.333 14.57 0.00 37.67 1.40
4498 10351 8.384607 TGAACAGTGTTGTGCTATGTTTATTA 57.615 30.769 14.57 0.00 37.67 0.98
4500 10353 9.840427 GAACAGTGTTGTGCTATGTTTATTATT 57.160 29.630 14.57 0.00 37.67 1.40
4505 10358 9.289303 GTGTTGTGCTATGTTTATTATTTCCAG 57.711 33.333 0.00 0.00 0.00 3.86
4522 10375 5.880054 TTCCAGATACTTAAAAGTGCAGC 57.120 39.130 5.62 0.00 40.07 5.25
4559 10412 3.191539 GAGCGCAGGCACTACAGC 61.192 66.667 11.47 0.00 43.41 4.40
4568 10421 3.248043 GCACTACAGCCATCAACCA 57.752 52.632 0.00 0.00 0.00 3.67
4612 10465 1.304547 TAATTTGGCCCCACCCGTG 60.305 57.895 0.00 0.00 37.83 4.94
4627 10480 1.606313 CGTGGGCAAAAGGGGATGT 60.606 57.895 0.00 0.00 0.00 3.06
4628 10481 1.876497 CGTGGGCAAAAGGGGATGTG 61.876 60.000 0.00 0.00 0.00 3.21
4650 10503 6.862608 TGTGAAGCAAGTACATTTAATGCAAG 59.137 34.615 4.68 0.00 39.42 4.01
4651 10504 6.863126 GTGAAGCAAGTACATTTAATGCAAGT 59.137 34.615 4.68 0.00 39.42 3.16
4658 10511 6.599437 AGTACATTTAATGCAAGTCGTTCAC 58.401 36.000 4.68 0.00 0.00 3.18
4659 10512 5.431420 ACATTTAATGCAAGTCGTTCACA 57.569 34.783 4.68 0.00 0.00 3.58
4660 10513 5.826586 ACATTTAATGCAAGTCGTTCACAA 58.173 33.333 4.68 0.00 0.00 3.33
4661 10514 5.685511 ACATTTAATGCAAGTCGTTCACAAC 59.314 36.000 4.68 0.00 0.00 3.32
4662 10515 4.884458 TTAATGCAAGTCGTTCACAACA 57.116 36.364 0.00 0.00 0.00 3.33
4663 10516 3.988379 AATGCAAGTCGTTCACAACAT 57.012 38.095 0.00 0.00 0.00 2.71
4664 10517 2.753989 TGCAAGTCGTTCACAACATG 57.246 45.000 0.00 0.00 0.00 3.21
4665 10518 2.013400 TGCAAGTCGTTCACAACATGT 58.987 42.857 0.00 0.00 0.00 3.21
4749 10602 8.573035 TGAAAAGCTATAACTTTTGAACGGAAT 58.427 29.630 16.58 0.00 46.99 3.01
4770 10623 6.468000 GGAATGTCGAAATTGTAATCCGTTTC 59.532 38.462 5.31 0.00 0.00 2.78
4772 10625 4.755629 TGTCGAAATTGTAATCCGTTTCCA 59.244 37.500 0.00 0.00 0.00 3.53
4774 10627 5.963586 GTCGAAATTGTAATCCGTTTCCATC 59.036 40.000 0.00 0.00 0.00 3.51
4775 10628 5.644206 TCGAAATTGTAATCCGTTTCCATCA 59.356 36.000 0.00 0.00 0.00 3.07
4786 10639 5.566469 TCCGTTTCCATCATTAGGTTTCTT 58.434 37.500 0.00 0.00 0.00 2.52
4788 10641 5.183140 CCGTTTCCATCATTAGGTTTCTTGT 59.817 40.000 0.00 0.00 0.00 3.16
4813 10666 4.104738 AGGAGTTCTTCAAAACAGATCCCA 59.895 41.667 0.00 0.00 0.00 4.37
4816 10669 5.388654 AGTTCTTCAAAACAGATCCCATGT 58.611 37.500 0.00 0.00 0.00 3.21
4834 10687 4.500716 CCATGTGGGTAGGTTTCAACAAAC 60.501 45.833 0.00 0.00 41.22 2.93
4835 10688 3.970842 TGTGGGTAGGTTTCAACAAACT 58.029 40.909 0.00 0.00 41.61 2.66
4836 10689 4.345854 TGTGGGTAGGTTTCAACAAACTT 58.654 39.130 0.00 0.00 41.61 2.66
4837 10690 4.773149 TGTGGGTAGGTTTCAACAAACTTT 59.227 37.500 0.00 0.00 41.61 2.66
4838 10691 5.246429 TGTGGGTAGGTTTCAACAAACTTTT 59.754 36.000 0.00 0.00 41.61 2.27
4839 10692 6.167685 GTGGGTAGGTTTCAACAAACTTTTT 58.832 36.000 0.00 0.00 41.61 1.94
4858 10711 4.806342 TTTTCTCAAGCAACTTCGGTAC 57.194 40.909 0.00 0.00 0.00 3.34
4859 10712 3.746045 TTCTCAAGCAACTTCGGTACT 57.254 42.857 0.00 0.00 0.00 2.73
4860 10713 4.859304 TTCTCAAGCAACTTCGGTACTA 57.141 40.909 0.00 0.00 0.00 1.82
4861 10714 5.401531 TTCTCAAGCAACTTCGGTACTAT 57.598 39.130 0.00 0.00 0.00 2.12
4862 10715 6.519679 TTCTCAAGCAACTTCGGTACTATA 57.480 37.500 0.00 0.00 0.00 1.31
4863 10716 6.710597 TCTCAAGCAACTTCGGTACTATAT 57.289 37.500 0.00 0.00 0.00 0.86
4864 10717 6.504398 TCTCAAGCAACTTCGGTACTATATG 58.496 40.000 0.00 0.00 0.00 1.78
4865 10718 5.597806 TCAAGCAACTTCGGTACTATATGG 58.402 41.667 0.00 0.00 0.00 2.74
4866 10719 4.602340 AGCAACTTCGGTACTATATGGG 57.398 45.455 0.00 0.00 0.00 4.00
4867 10720 3.323979 AGCAACTTCGGTACTATATGGGG 59.676 47.826 0.00 0.00 0.00 4.96
4868 10721 3.660865 CAACTTCGGTACTATATGGGGC 58.339 50.000 0.00 0.00 0.00 5.80
4869 10722 1.891150 ACTTCGGTACTATATGGGGCG 59.109 52.381 0.00 0.00 0.00 6.13
4870 10723 1.203994 CTTCGGTACTATATGGGGCGG 59.796 57.143 0.00 0.00 0.00 6.13
4881 10734 3.449227 GGGGCGGCTTTTAGTGCC 61.449 66.667 9.56 0.00 46.82 5.01
4925 10778 5.475719 TGTTCTCTTACCATAACCGTCAAG 58.524 41.667 0.00 0.00 0.00 3.02
4932 10785 1.208535 CCATAACCGTCAAGTAGCCCA 59.791 52.381 0.00 0.00 0.00 5.36
4961 10814 6.436532 CCCTCCTAAGTTGACTACTTTGACTA 59.563 42.308 7.59 0.00 44.73 2.59
4986 10839 6.786207 TCAAGTAATCACACTATGACTCTCG 58.214 40.000 0.00 0.00 41.24 4.04
4988 10841 6.612247 AGTAATCACACTATGACTCTCGAG 57.388 41.667 5.93 5.93 41.24 4.04
5020 10873 7.182817 ACATTGTCCTCAGTTGCTTACTATA 57.817 36.000 0.00 0.00 34.56 1.31
5024 10877 6.097356 TGTCCTCAGTTGCTTACTATAAACG 58.903 40.000 0.00 0.00 34.56 3.60
5027 10880 7.009357 GTCCTCAGTTGCTTACTATAAACGAAG 59.991 40.741 0.00 0.00 34.56 3.79
5069 10922 5.927954 AATTTGTGCTGCAATAGGTTTTG 57.072 34.783 2.77 0.00 36.89 2.44
5134 10992 1.648467 GGCAACTGAGAATCACCGGC 61.648 60.000 0.00 0.00 42.56 6.13
5161 11031 6.770303 AGTAAGTAAATAGTACTCCCTCCGTC 59.230 42.308 0.00 0.00 0.00 4.79
5163 11033 3.684408 AAATAGTACTCCCTCCGTCCT 57.316 47.619 0.00 0.00 0.00 3.85
5178 11048 5.105473 CCTCCGTCCTAAAATAAGTGACTCA 60.105 44.000 0.00 0.00 0.00 3.41
5195 11065 8.788325 AGTGACTCAACTTTGTACTAACTTTT 57.212 30.769 0.00 0.00 0.00 2.27
5196 11066 9.880157 AGTGACTCAACTTTGTACTAACTTTTA 57.120 29.630 0.00 0.00 0.00 1.52
5222 11092 7.675962 ACACACAAAGTTAGTACAAAGTTGA 57.324 32.000 0.00 0.00 0.00 3.18
5223 11093 7.748847 ACACACAAAGTTAGTACAAAGTTGAG 58.251 34.615 0.00 0.00 0.00 3.02
5224 11094 7.389607 ACACACAAAGTTAGTACAAAGTTGAGT 59.610 33.333 0.00 0.00 0.00 3.41
5225 11095 7.903431 CACACAAAGTTAGTACAAAGTTGAGTC 59.097 37.037 0.00 0.00 0.00 3.36
5226 11096 7.604927 ACACAAAGTTAGTACAAAGTTGAGTCA 59.395 33.333 0.00 0.00 0.00 3.41
5227 11097 7.903431 CACAAAGTTAGTACAAAGTTGAGTCAC 59.097 37.037 0.00 0.00 0.00 3.67
5228 11098 7.822822 ACAAAGTTAGTACAAAGTTGAGTCACT 59.177 33.333 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.023707 AGTCTCATCTTTTCAACCGCAAAG 60.024 41.667 0.00 0.00 0.00 2.77
28 29 3.476552 AGTCTCATCTTTTCAACCGCAA 58.523 40.909 0.00 0.00 0.00 4.85
65 66 5.522456 TGATTTCAGTTGTCTTGTCATTGC 58.478 37.500 0.00 0.00 0.00 3.56
87 88 8.730427 GTGTCGTATTTGTTGACTTTTAGTTTG 58.270 33.333 0.00 0.00 33.81 2.93
92 93 8.199176 TCAAGTGTCGTATTTGTTGACTTTTA 57.801 30.769 0.00 0.00 33.81 1.52
125 126 5.472137 GGAGTTAGCACCAACTTTTGTCATA 59.528 40.000 0.67 0.00 38.86 2.15
127 128 3.630312 GGAGTTAGCACCAACTTTTGTCA 59.370 43.478 0.67 0.00 38.86 3.58
165 166 2.847327 ACCCTCATGAGTCACAACTG 57.153 50.000 21.11 3.37 35.28 3.16
177 178 6.919775 AGCGAGTTAGAATATAACCCTCAT 57.080 37.500 0.00 0.00 0.00 2.90
194 195 4.159244 AGAGTAGTTGGAGATAGCGAGT 57.841 45.455 0.00 0.00 0.00 4.18
195 196 4.153475 GCTAGAGTAGTTGGAGATAGCGAG 59.847 50.000 0.00 0.00 0.00 5.03
196 197 4.066490 GCTAGAGTAGTTGGAGATAGCGA 58.934 47.826 0.00 0.00 0.00 4.93
204 215 7.812690 TCAATATTACGCTAGAGTAGTTGGA 57.187 36.000 18.76 9.19 0.00 3.53
210 221 9.551734 TGACTAGTTCAATATTACGCTAGAGTA 57.448 33.333 18.33 1.77 32.64 2.59
236 247 4.417437 ACGGAGGGAGTATAGCATTGTAT 58.583 43.478 0.00 0.00 0.00 2.29
246 257 5.661759 ACTTATTTTGAGACGGAGGGAGTAT 59.338 40.000 0.00 0.00 0.00 2.12
252 263 4.822026 AGACACTTATTTTGAGACGGAGG 58.178 43.478 0.00 0.00 0.00 4.30
253 264 5.470368 TGAGACACTTATTTTGAGACGGAG 58.530 41.667 0.00 0.00 0.00 4.63
255 266 6.727824 ATTGAGACACTTATTTTGAGACGG 57.272 37.500 0.00 0.00 0.00 4.79
256 267 8.895845 CAAAATTGAGACACTTATTTTGAGACG 58.104 33.333 17.64 0.00 44.64 4.18
412 1414 7.700234 GCATGTCACCAAAAATTATATCGTTGA 59.300 33.333 0.00 0.00 0.00 3.18
477 1480 9.683870 TTATAACTCCCCGTTGTATTTTATGTT 57.316 29.630 0.00 0.00 37.05 2.71
479 1482 9.940166 GTTTATAACTCCCCGTTGTATTTTATG 57.060 33.333 0.00 0.00 37.05 1.90
480 1483 9.123902 GGTTTATAACTCCCCGTTGTATTTTAT 57.876 33.333 0.00 0.00 37.05 1.40
481 1484 8.105829 TGGTTTATAACTCCCCGTTGTATTTTA 58.894 33.333 4.15 0.00 37.05 1.52
491 1494 3.389983 TCATCCTGGTTTATAACTCCCCG 59.610 47.826 0.00 0.00 0.00 5.73
497 1500 8.702819 AGTACTACCTTCATCCTGGTTTATAAC 58.297 37.037 0.00 0.00 37.74 1.89
505 1508 6.793505 AAGTTAGTACTACCTTCATCCTGG 57.206 41.667 6.86 0.00 33.17 4.45
544 1547 9.010029 GTCCCAAAATAAGTGTCTCAATCTTAA 57.990 33.333 0.00 0.00 0.00 1.85
549 1552 4.700213 CCGTCCCAAAATAAGTGTCTCAAT 59.300 41.667 0.00 0.00 0.00 2.57
562 1565 1.001181 CGTACTTCCTCCGTCCCAAAA 59.999 52.381 0.00 0.00 0.00 2.44
565 1568 0.962356 GACGTACTTCCTCCGTCCCA 60.962 60.000 0.00 0.00 43.77 4.37
575 3679 6.347240 CCGTGACTATGGTATAGACGTACTTC 60.347 46.154 3.04 0.00 0.00 3.01
576 3680 5.468072 CCGTGACTATGGTATAGACGTACTT 59.532 44.000 3.04 0.00 0.00 2.24
589 3693 3.936372 AATATCGACCCGTGACTATGG 57.064 47.619 0.00 0.00 0.00 2.74
649 4131 1.877637 TGAACCAATGACTGACACGG 58.122 50.000 0.00 0.00 0.00 4.94
652 4134 6.514870 GCAAATAGTTGAACCAATGACTGACA 60.515 38.462 7.18 0.00 36.83 3.58
657 4139 4.622740 GCTGCAAATAGTTGAACCAATGAC 59.377 41.667 7.18 0.00 36.83 3.06
661 4145 2.030363 CGGCTGCAAATAGTTGAACCAA 60.030 45.455 7.18 0.00 36.83 3.67
726 4210 7.520451 AGTAATTCTTTAGAACGGCCTTTTT 57.480 32.000 0.00 0.00 36.80 1.94
731 4215 8.228464 GCAATATAGTAATTCTTTAGAACGGCC 58.772 37.037 0.00 0.00 36.80 6.13
792 4276 3.348119 TGCCTGCCGTATGACAAATTAA 58.652 40.909 0.00 0.00 0.00 1.40
813 4297 3.834231 CCCAAATTGGATCCAGAACAACT 59.166 43.478 15.53 0.00 40.96 3.16
860 4344 0.312102 GTTGCTCAAGTTGGACCAGC 59.688 55.000 2.34 0.00 0.00 4.85
863 4347 0.954452 CTGGTTGCTCAAGTTGGACC 59.046 55.000 2.34 7.25 0.00 4.46
868 4352 2.806608 CAATGCTGGTTGCTCAAGTT 57.193 45.000 0.00 0.00 43.37 2.66
942 4426 3.679389 CTGATGTTGCTTCTGGTAGGTT 58.321 45.455 0.00 0.00 0.00 3.50
944 4428 2.012673 GCTGATGTTGCTTCTGGTAGG 58.987 52.381 0.00 0.00 0.00 3.18
946 4430 2.703416 CTGCTGATGTTGCTTCTGGTA 58.297 47.619 0.00 0.00 0.00 3.25
997 4481 2.650322 GACCATTTCCGAGCCCATTAA 58.350 47.619 0.00 0.00 0.00 1.40
1073 4557 6.443850 GCGTCATCGGTAGGATAGATCCAC 62.444 54.167 11.14 6.89 42.39 4.02
1076 4560 3.011119 AGCGTCATCGGTAGGATAGATC 58.989 50.000 0.00 0.00 46.01 2.75
1248 4732 6.109156 TCACACAACACTACCTTGTATGAT 57.891 37.500 0.00 0.00 31.61 2.45
1251 4735 4.347000 ACCTCACACAACACTACCTTGTAT 59.653 41.667 0.00 0.00 30.48 2.29
1257 4741 1.338973 TCGACCTCACACAACACTACC 59.661 52.381 0.00 0.00 0.00 3.18
1329 4813 1.765074 GTTGGGGGTGAGCCACTTA 59.235 57.895 3.91 0.00 38.54 2.24
1368 4852 0.676184 GGATCATGAGGACTAGCGCA 59.324 55.000 11.47 0.00 0.00 6.09
1380 4864 3.354948 TTGACCTTGTCCTGGATCATG 57.645 47.619 0.00 2.85 0.00 3.07
1444 4928 2.031683 AGAAAAACAGTCCGAAAGCACG 59.968 45.455 0.00 0.00 0.00 5.34
1452 4936 3.467803 AGTGGAAGAGAAAAACAGTCCG 58.532 45.455 0.00 0.00 0.00 4.79
1534 5018 7.693952 TGAGAATTCACTGTTGAGTTTAACAC 58.306 34.615 8.44 0.00 35.75 3.32
1554 5038 7.445121 ACATCAACTGAAGTCAAGTATGAGAA 58.555 34.615 0.00 0.00 35.88 2.87
1625 5110 7.012044 ACCGTGTCAAAGCTAATTAATATGACC 59.988 37.037 13.44 7.59 35.91 4.02
1626 5111 7.916552 ACCGTGTCAAAGCTAATTAATATGAC 58.083 34.615 10.88 10.88 36.97 3.06
1694 5186 1.410224 GGAATAAACCCTGGCCTCTGG 60.410 57.143 3.32 4.02 0.00 3.86
1701 5193 7.936301 TCTTTCAAAAATTGGAATAAACCCTGG 59.064 33.333 0.00 0.00 0.00 4.45
1703 5195 9.913310 TTTCTTTCAAAAATTGGAATAAACCCT 57.087 25.926 0.00 0.00 0.00 4.34
1721 5213 7.827236 CGGGTTATATATATGGGCTTTCTTTCA 59.173 37.037 5.44 0.00 0.00 2.69
1722 5214 8.044908 TCGGGTTATATATATGGGCTTTCTTTC 58.955 37.037 5.44 0.00 0.00 2.62
1723 5215 7.924541 TCGGGTTATATATATGGGCTTTCTTT 58.075 34.615 5.44 0.00 0.00 2.52
1725 5217 7.504926 TTCGGGTTATATATATGGGCTTTCT 57.495 36.000 5.44 0.00 0.00 2.52
1726 5218 8.747538 ATTTCGGGTTATATATATGGGCTTTC 57.252 34.615 5.44 0.00 0.00 2.62
1727 5219 8.966868 CAATTTCGGGTTATATATATGGGCTTT 58.033 33.333 5.44 0.00 0.00 3.51
1729 5221 7.773690 GTCAATTTCGGGTTATATATATGGGCT 59.226 37.037 5.44 0.00 0.00 5.19
1730 5222 7.554835 TGTCAATTTCGGGTTATATATATGGGC 59.445 37.037 5.44 0.00 0.00 5.36
1741 5233 9.238368 AGATAATCTTTTGTCAATTTCGGGTTA 57.762 29.630 0.00 0.00 0.00 2.85
1743 5235 7.703058 AGATAATCTTTTGTCAATTTCGGGT 57.297 32.000 0.00 0.00 0.00 5.28
1744 5236 9.503427 GTAAGATAATCTTTTGTCAATTTCGGG 57.497 33.333 0.00 0.00 37.89 5.14
1746 5238 9.503427 GGGTAAGATAATCTTTTGTCAATTTCG 57.497 33.333 0.00 0.00 37.89 3.46
1749 5241 9.190317 GGAGGGTAAGATAATCTTTTGTCAATT 57.810 33.333 0.00 0.00 37.89 2.32
1751 5243 7.928873 AGGAGGGTAAGATAATCTTTTGTCAA 58.071 34.615 0.00 0.00 37.89 3.18
1752 5244 7.510675 AGGAGGGTAAGATAATCTTTTGTCA 57.489 36.000 0.00 0.00 37.89 3.58
1753 5245 7.224949 CGAAGGAGGGTAAGATAATCTTTTGTC 59.775 40.741 0.00 0.00 37.89 3.18
1773 5265 2.574369 AGAGAGAGAGAGGAACGAAGGA 59.426 50.000 0.00 0.00 0.00 3.36
1776 5268 3.517901 AGAGAGAGAGAGAGAGGAACGAA 59.482 47.826 0.00 0.00 0.00 3.85
1779 5271 4.407296 AGAGAGAGAGAGAGAGAGAGGAAC 59.593 50.000 0.00 0.00 0.00 3.62
1780 5272 4.624913 AGAGAGAGAGAGAGAGAGAGGAA 58.375 47.826 0.00 0.00 0.00 3.36
1784 5276 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1786 5278 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1789 5281 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1790 5282 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1791 5283 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1792 5284 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1793 5285 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1794 5286 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1795 5287 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1796 5288 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1797 5289 5.242838 GGTAGAGAGAGAGAGAGAGAGAGAG 59.757 52.000 0.00 0.00 0.00 3.20
1798 5290 5.141182 GGTAGAGAGAGAGAGAGAGAGAGA 58.859 50.000 0.00 0.00 0.00 3.10
1799 5291 4.282195 GGGTAGAGAGAGAGAGAGAGAGAG 59.718 54.167 0.00 0.00 0.00 3.20
1800 5292 4.078571 AGGGTAGAGAGAGAGAGAGAGAGA 60.079 50.000 0.00 0.00 0.00 3.10
1801 5293 4.227197 AGGGTAGAGAGAGAGAGAGAGAG 58.773 52.174 0.00 0.00 0.00 3.20
1802 5294 4.078571 AGAGGGTAGAGAGAGAGAGAGAGA 60.079 50.000 0.00 0.00 0.00 3.10
1803 5295 4.227197 AGAGGGTAGAGAGAGAGAGAGAG 58.773 52.174 0.00 0.00 0.00 3.20
1804 5296 4.280789 AGAGGGTAGAGAGAGAGAGAGA 57.719 50.000 0.00 0.00 0.00 3.10
1805 5297 5.780282 TCATAGAGGGTAGAGAGAGAGAGAG 59.220 48.000 0.00 0.00 0.00 3.20
1806 5298 5.722290 TCATAGAGGGTAGAGAGAGAGAGA 58.278 45.833 0.00 0.00 0.00 3.10
1807 5299 6.183361 TGTTCATAGAGGGTAGAGAGAGAGAG 60.183 46.154 0.00 0.00 0.00 3.20
1808 5300 5.668080 TGTTCATAGAGGGTAGAGAGAGAGA 59.332 44.000 0.00 0.00 0.00 3.10
1809 5301 5.935945 TGTTCATAGAGGGTAGAGAGAGAG 58.064 45.833 0.00 0.00 0.00 3.20
1810 5302 5.430417 ACTGTTCATAGAGGGTAGAGAGAGA 59.570 44.000 0.00 0.00 0.00 3.10
1811 5303 5.690865 ACTGTTCATAGAGGGTAGAGAGAG 58.309 45.833 0.00 0.00 0.00 3.20
1812 5304 5.718801 ACTGTTCATAGAGGGTAGAGAGA 57.281 43.478 0.00 0.00 0.00 3.10
1813 5305 7.883391 TTTACTGTTCATAGAGGGTAGAGAG 57.117 40.000 0.00 0.00 0.00 3.20
1814 5306 8.840200 AATTTACTGTTCATAGAGGGTAGAGA 57.160 34.615 0.00 0.00 0.00 3.10
1815 5307 8.696374 TGAATTTACTGTTCATAGAGGGTAGAG 58.304 37.037 0.00 0.00 31.07 2.43
1816 5308 8.603898 TGAATTTACTGTTCATAGAGGGTAGA 57.396 34.615 0.00 0.00 31.07 2.59
1817 5309 9.667107 TTTGAATTTACTGTTCATAGAGGGTAG 57.333 33.333 0.00 0.00 35.68 3.18
1863 5365 4.033129 CCATATTTGATGCCGCAAAGTTTG 59.967 41.667 11.41 11.41 40.68 2.93
1864 5366 4.183101 CCATATTTGATGCCGCAAAGTTT 58.817 39.130 0.00 0.00 40.68 2.66
1869 5371 2.373224 TGACCATATTTGATGCCGCAA 58.627 42.857 0.00 0.00 0.00 4.85
1874 5376 4.567959 GCCAAGTTTGACCATATTTGATGC 59.432 41.667 0.00 0.00 0.00 3.91
1887 5389 3.190327 CGTGATACAATGGCCAAGTTTGA 59.810 43.478 21.59 5.98 0.00 2.69
1891 5393 2.083774 CACGTGATACAATGGCCAAGT 58.916 47.619 10.96 14.93 0.00 3.16
1892 5394 1.202177 GCACGTGATACAATGGCCAAG 60.202 52.381 22.23 8.53 0.00 3.61
1896 5398 1.024271 ATGGCACGTGATACAATGGC 58.976 50.000 22.23 1.84 38.08 4.40
1897 5399 5.214417 CAAATATGGCACGTGATACAATGG 58.786 41.667 22.23 0.00 0.00 3.16
1948 6358 5.945784 ACCAGCAGACATTTCAAATTAGCTA 59.054 36.000 0.00 0.00 0.00 3.32
1977 6388 6.216868 ACACCCAACCCTTCTAGTATATTTGT 59.783 38.462 0.00 0.00 0.00 2.83
2086 6497 7.010738 TCACACTTAAAGAGGTTGTACTTTTCG 59.989 37.037 0.00 0.00 37.49 3.46
2094 6506 7.823745 ATTTGATCACACTTAAAGAGGTTGT 57.176 32.000 0.00 0.00 0.00 3.32
2204 6616 7.538678 GCCAAAAATATCGACATCCACAATATC 59.461 37.037 0.00 0.00 0.00 1.63
2353 6986 5.279256 GCCCACCAAATAACCGCATTATAAT 60.279 40.000 0.00 0.00 32.86 1.28
2441 7149 5.009310 CAGTATAGTACATGTAGCCACCGAA 59.991 44.000 5.62 0.00 0.00 4.30
2501 7557 3.090037 TGCACTCTCTTACCACCTAGAC 58.910 50.000 0.00 0.00 0.00 2.59
2563 8272 2.095919 GGTCGGACCAACGATTTTTCAG 60.096 50.000 22.10 0.00 45.47 3.02
2578 8288 5.593679 TTTGGTTTACAATTTTGGTCGGA 57.406 34.783 0.00 0.00 39.21 4.55
2634 8368 8.893563 ATTCACCATACTCCCTAATTTTGAAA 57.106 30.769 0.00 0.00 0.00 2.69
2684 8418 4.698304 TGACGGGGTGAATAATTTCTCAAC 59.302 41.667 0.00 0.00 32.78 3.18
2698 8434 0.881118 CACCTGATTTTGACGGGGTG 59.119 55.000 0.00 0.00 38.04 4.61
2703 8439 2.878406 ACTTGGTCACCTGATTTTGACG 59.122 45.455 0.00 0.00 42.67 4.35
2731 8467 4.750098 CACAACTAATTGAGGTCTTCACGT 59.250 41.667 0.00 0.00 39.30 4.49
2732 8468 4.988540 TCACAACTAATTGAGGTCTTCACG 59.011 41.667 0.00 0.00 39.30 4.35
2863 8707 4.588106 TGAAAGGCCTCACAATCAATTGAA 59.412 37.500 13.09 0.00 40.14 2.69
2885 8729 1.123928 CACTAAGCTCCCTAGGGGTG 58.876 60.000 28.19 21.03 44.74 4.61
2954 8798 7.899178 ACGGTTGTCAAAAGAAAAGAAAAAT 57.101 28.000 0.00 0.00 0.00 1.82
2955 8799 8.083462 AGTACGGTTGTCAAAAGAAAAGAAAAA 58.917 29.630 0.00 0.00 0.00 1.94
2987 8831 5.622346 AGCTAGCTAAAAGGCAAGATAGT 57.378 39.130 17.69 0.00 34.84 2.12
2988 8832 7.978975 CCTATAGCTAGCTAAAAGGCAAGATAG 59.021 40.741 29.50 21.71 35.34 2.08
3000 8844 5.076057 ACCAGGTTCCTATAGCTAGCTAA 57.924 43.478 27.47 15.53 31.73 3.09
3003 8847 3.804063 GCAACCAGGTTCCTATAGCTAGC 60.804 52.174 6.62 6.62 0.00 3.42
3029 8873 9.934190 CAAGGGTTCAATTTGTTTAAGAAATTG 57.066 29.630 24.94 24.94 45.84 2.32
3050 8894 6.966534 AGCCTCAATTATAAATGACAAGGG 57.033 37.500 0.00 1.43 0.00 3.95
3067 8911 7.966204 GCTTCGTTAAAAATATTACAAGCCTCA 59.034 33.333 0.00 0.00 0.00 3.86
3068 8912 7.966204 TGCTTCGTTAAAAATATTACAAGCCTC 59.034 33.333 14.11 0.00 34.17 4.70
3157 9003 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
3158 9004 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
3159 9005 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
3160 9006 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
3161 9007 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
3162 9008 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
3163 9009 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
3164 9010 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
3165 9011 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
3166 9012 7.853929 CCAAAAACGTTCTTATATTATGGGACG 59.146 37.037 0.00 9.33 0.00 4.79
3167 9013 7.646526 GCCAAAAACGTTCTTATATTATGGGAC 59.353 37.037 0.00 0.00 0.00 4.46
3168 9014 7.339721 TGCCAAAAACGTTCTTATATTATGGGA 59.660 33.333 0.00 1.11 0.00 4.37
3169 9015 7.434013 GTGCCAAAAACGTTCTTATATTATGGG 59.566 37.037 0.00 0.00 0.00 4.00
3170 9016 8.188139 AGTGCCAAAAACGTTCTTATATTATGG 58.812 33.333 0.00 3.63 0.00 2.74
3175 9021 9.609346 AGTATAGTGCCAAAAACGTTCTTATAT 57.391 29.630 0.00 0.00 0.00 0.86
3177 9023 7.916914 AGTATAGTGCCAAAAACGTTCTTAT 57.083 32.000 0.00 0.00 0.00 1.73
3178 9024 8.470040 CTAGTATAGTGCCAAAAACGTTCTTA 57.530 34.615 0.00 0.00 32.85 2.10
3179 9025 7.360575 CTAGTATAGTGCCAAAAACGTTCTT 57.639 36.000 0.00 0.00 32.85 2.52
3180 9026 6.963049 CTAGTATAGTGCCAAAAACGTTCT 57.037 37.500 0.00 0.00 32.85 3.01
3208 9054 9.675464 TCTGTCCCATAATATAAGAACGTTTTT 57.325 29.630 9.22 9.22 0.00 1.94
3209 9055 9.326413 CTCTGTCCCATAATATAAGAACGTTTT 57.674 33.333 0.46 0.00 0.00 2.43
3210 9056 7.931948 CCTCTGTCCCATAATATAAGAACGTTT 59.068 37.037 0.46 0.00 0.00 3.60
3211 9057 7.442656 CCTCTGTCCCATAATATAAGAACGTT 58.557 38.462 0.00 0.00 0.00 3.99
3212 9058 6.014499 CCCTCTGTCCCATAATATAAGAACGT 60.014 42.308 0.00 0.00 0.00 3.99
3213 9059 6.210784 TCCCTCTGTCCCATAATATAAGAACG 59.789 42.308 0.00 0.00 0.00 3.95
3214 9060 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
3215 9061 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
3216 9062 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
3217 9063 7.896496 ACTACTCCCTCTGTCCCATAATATAAG 59.104 40.741 0.00 0.00 0.00 1.73
3218 9064 7.776745 ACTACTCCCTCTGTCCCATAATATAA 58.223 38.462 0.00 0.00 0.00 0.98
3219 9065 7.358255 ACTACTCCCTCTGTCCCATAATATA 57.642 40.000 0.00 0.00 0.00 0.86
3220 9066 6.234404 ACTACTCCCTCTGTCCCATAATAT 57.766 41.667 0.00 0.00 0.00 1.28
3221 9067 5.681494 ACTACTCCCTCTGTCCCATAATA 57.319 43.478 0.00 0.00 0.00 0.98
3222 9068 4.561254 ACTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
3223 9069 4.287552 GAACTACTCCCTCTGTCCCATAA 58.712 47.826 0.00 0.00 0.00 1.90
3224 9070 3.373877 GGAACTACTCCCTCTGTCCCATA 60.374 52.174 0.00 0.00 38.44 2.74
3225 9071 2.627217 GGAACTACTCCCTCTGTCCCAT 60.627 54.545 0.00 0.00 38.44 4.00
3226 9072 1.273098 GGAACTACTCCCTCTGTCCCA 60.273 57.143 0.00 0.00 38.44 4.37
3227 9073 1.007359 AGGAACTACTCCCTCTGTCCC 59.993 57.143 0.00 0.00 46.81 4.46
3228 9074 2.535836 AGGAACTACTCCCTCTGTCC 57.464 55.000 0.00 0.00 46.81 4.02
3229 9075 5.997384 TTTAAGGAACTACTCCCTCTGTC 57.003 43.478 0.00 0.00 46.81 3.51
3230 9076 6.023603 TGATTTAAGGAACTACTCCCTCTGT 58.976 40.000 0.00 0.00 46.81 3.41
3231 9077 6.546428 TGATTTAAGGAACTACTCCCTCTG 57.454 41.667 0.00 0.00 46.81 3.35
3232 9078 5.129650 GCTGATTTAAGGAACTACTCCCTCT 59.870 44.000 0.00 0.00 46.81 3.69
3233 9079 5.104900 TGCTGATTTAAGGAACTACTCCCTC 60.105 44.000 0.00 0.00 46.81 4.30
3234 9080 4.783227 TGCTGATTTAAGGAACTACTCCCT 59.217 41.667 0.00 0.00 46.81 4.20
3235 9081 5.099042 TGCTGATTTAAGGAACTACTCCC 57.901 43.478 0.00 0.00 46.81 4.30
3236 9082 6.116126 ACATGCTGATTTAAGGAACTACTCC 58.884 40.000 0.00 0.00 45.81 3.85
3237 9083 7.617041 AACATGCTGATTTAAGGAACTACTC 57.383 36.000 0.00 0.00 38.49 2.59
3282 9128 5.855045 ACTAAAGTCGGAAGTCAGAATTGT 58.145 37.500 0.00 0.00 29.71 2.71
3285 9131 6.015350 TCAGAACTAAAGTCGGAAGTCAGAAT 60.015 38.462 0.00 0.00 0.00 2.40
3311 9157 3.686726 GGATCACAAGCCAGACTAAACTG 59.313 47.826 0.00 0.00 37.61 3.16
3334 9180 0.861837 GGAGAGATATTGTTGGCGCG 59.138 55.000 0.00 0.00 0.00 6.86
3350 9196 9.799106 AGTTGGTGGATAAATCTATAATTGGAG 57.201 33.333 0.00 0.00 0.00 3.86
3377 9223 5.471797 TCAAGTTTTGCATCGACTAATTGGA 59.528 36.000 0.00 0.00 0.00 3.53
3414 9260 8.374743 AGTATGCTACTAGTTAGTACCTAGACC 58.625 40.741 8.61 0.00 37.23 3.85
3483 9330 2.093890 TGGTGGCATGCAGTTATCAAG 58.906 47.619 21.36 0.00 0.00 3.02
3488 9335 3.278574 GAGTAATGGTGGCATGCAGTTA 58.721 45.455 21.36 7.59 0.00 2.24
3516 9364 6.183360 CCAACTTGCAGTTCAGTTTACAAGTA 60.183 38.462 6.62 0.00 45.00 2.24
3518 9366 5.036737 CCAACTTGCAGTTCAGTTTACAAG 58.963 41.667 0.00 0.00 36.03 3.16
3519 9367 4.461081 ACCAACTTGCAGTTCAGTTTACAA 59.539 37.500 0.00 0.00 36.03 2.41
3520 9368 4.013728 ACCAACTTGCAGTTCAGTTTACA 58.986 39.130 0.00 0.00 36.03 2.41
3533 9381 4.923281 CCTGCAAATTAGTTACCAACTTGC 59.077 41.667 3.06 3.06 42.81 4.01
3534 9382 6.084326 ACCTGCAAATTAGTTACCAACTTG 57.916 37.500 0.00 0.00 42.81 3.16
3538 9386 8.588290 AATGATACCTGCAAATTAGTTACCAA 57.412 30.769 0.00 0.00 0.00 3.67
3540 9388 8.682710 TCAAATGATACCTGCAAATTAGTTACC 58.317 33.333 0.00 0.00 0.00 2.85
3613 9461 4.036215 GTTGTACTCGAACAACGTCATG 57.964 45.455 15.28 0.00 46.88 3.07
3667 9515 2.041485 TGAATGGTTCTTCATGGCCTCA 59.959 45.455 3.32 0.00 30.34 3.86
3853 9701 2.122547 ACACCAGGGAAGGACGGT 60.123 61.111 0.00 0.00 0.00 4.83
4177 10025 2.735762 GCCGTAGATGTGAGTGGTCTTC 60.736 54.545 0.00 0.00 0.00 2.87
4234 10082 6.770785 AGGAGCAACAACTAGAAAACAATACA 59.229 34.615 0.00 0.00 0.00 2.29
4240 10088 6.613755 TTGTAGGAGCAACAACTAGAAAAC 57.386 37.500 0.00 0.00 32.07 2.43
4241 10089 6.430000 GGATTGTAGGAGCAACAACTAGAAAA 59.570 38.462 0.00 0.00 39.51 2.29
4242 10090 5.938125 GGATTGTAGGAGCAACAACTAGAAA 59.062 40.000 0.00 0.00 39.51 2.52
4261 10109 6.446781 AGCTTGAAAGTCATATGTGGATTG 57.553 37.500 1.90 0.00 0.00 2.67
4270 10118 4.832248 ACGATGGAAGCTTGAAAGTCATA 58.168 39.130 2.10 0.00 0.00 2.15
4478 10326 9.019656 TGGAAATAATAAACATAGCACAACACT 57.980 29.630 0.00 0.00 0.00 3.55
4496 10349 8.458843 GCTGCACTTTTAAGTATCTGGAAATAA 58.541 33.333 0.00 0.00 37.08 1.40
4498 10351 6.660949 AGCTGCACTTTTAAGTATCTGGAAAT 59.339 34.615 1.02 0.00 37.08 2.17
4500 10353 5.412594 CAGCTGCACTTTTAAGTATCTGGAA 59.587 40.000 0.00 0.00 37.08 3.53
4501 10354 4.937620 CAGCTGCACTTTTAAGTATCTGGA 59.062 41.667 0.00 0.00 37.08 3.86
4522 10375 2.608640 GCTTTGCCAAAAGGTGCAG 58.391 52.632 0.00 0.00 42.66 4.41
4555 10408 0.036732 ATCACGTGGTTGATGGCTGT 59.963 50.000 17.00 0.00 34.79 4.40
4561 10414 0.321210 TTCCGCATCACGTGGTTGAT 60.321 50.000 17.00 0.00 46.24 2.57
4585 10438 1.490069 GGGGCCAAATTACCATGCATT 59.510 47.619 4.39 0.00 0.00 3.56
4586 10439 1.130777 GGGGCCAAATTACCATGCAT 58.869 50.000 4.39 0.00 0.00 3.96
4612 10465 0.897621 CTTCACATCCCCTTTTGCCC 59.102 55.000 0.00 0.00 0.00 5.36
4627 10480 6.980593 ACTTGCATTAAATGTACTTGCTTCA 58.019 32.000 0.00 0.00 34.47 3.02
4628 10481 6.249260 CGACTTGCATTAAATGTACTTGCTTC 59.751 38.462 0.00 0.00 34.47 3.86
4650 10503 7.929418 ACAGTATGACACATGTTGTGAACGAC 61.929 42.308 14.15 6.93 45.72 4.34
4651 10504 5.966960 ACAGTATGACACATGTTGTGAACGA 60.967 40.000 14.15 0.00 45.72 3.85
4658 10511 7.805700 TGATTTACACAGTATGACACATGTTG 58.194 34.615 0.00 0.00 39.69 3.33
4659 10512 7.977789 TGATTTACACAGTATGACACATGTT 57.022 32.000 0.00 0.00 39.69 2.71
4660 10513 7.877612 TCTTGATTTACACAGTATGACACATGT 59.122 33.333 0.00 0.00 39.69 3.21
4661 10514 8.255394 TCTTGATTTACACAGTATGACACATG 57.745 34.615 0.00 0.00 39.69 3.21
4662 10515 9.102757 GATCTTGATTTACACAGTATGACACAT 57.897 33.333 0.00 0.00 39.69 3.21
4663 10516 8.314021 AGATCTTGATTTACACAGTATGACACA 58.686 33.333 0.00 0.00 39.69 3.72
4664 10517 8.709386 AGATCTTGATTTACACAGTATGACAC 57.291 34.615 0.00 0.00 39.69 3.67
4665 10518 8.753133 AGAGATCTTGATTTACACAGTATGACA 58.247 33.333 0.00 0.00 39.69 3.58
4666 10519 9.593134 AAGAGATCTTGATTTACACAGTATGAC 57.407 33.333 0.00 0.00 35.29 3.06
4744 10597 4.033587 ACGGATTACAATTTCGACATTCCG 59.966 41.667 16.28 16.28 46.67 4.30
4749 10602 4.755629 TGGAAACGGATTACAATTTCGACA 59.244 37.500 0.00 0.00 32.87 4.35
4770 10623 5.500234 TCCTCACAAGAAACCTAATGATGG 58.500 41.667 0.00 0.00 0.00 3.51
4772 10625 6.380079 ACTCCTCACAAGAAACCTAATGAT 57.620 37.500 0.00 0.00 0.00 2.45
4774 10627 6.234177 AGAACTCCTCACAAGAAACCTAATG 58.766 40.000 0.00 0.00 0.00 1.90
4775 10628 6.441088 AGAACTCCTCACAAGAAACCTAAT 57.559 37.500 0.00 0.00 0.00 1.73
4786 10639 5.097742 TCTGTTTTGAAGAACTCCTCACA 57.902 39.130 0.00 0.00 0.00 3.58
4788 10641 5.308825 GGATCTGTTTTGAAGAACTCCTCA 58.691 41.667 0.00 0.00 0.00 3.86
4813 10666 4.542697 AGTTTGTTGAAACCTACCCACAT 58.457 39.130 0.00 0.00 42.25 3.21
4816 10669 6.361768 AAAAAGTTTGTTGAAACCTACCCA 57.638 33.333 0.00 0.00 42.25 4.51
4836 10689 4.879545 AGTACCGAAGTTGCTTGAGAAAAA 59.120 37.500 0.00 0.00 0.00 1.94
4837 10690 4.448210 AGTACCGAAGTTGCTTGAGAAAA 58.552 39.130 0.00 0.00 0.00 2.29
4838 10691 4.067972 AGTACCGAAGTTGCTTGAGAAA 57.932 40.909 0.00 0.00 0.00 2.52
4839 10692 3.746045 AGTACCGAAGTTGCTTGAGAA 57.254 42.857 0.00 0.00 0.00 2.87
4840 10693 6.461092 CCATATAGTACCGAAGTTGCTTGAGA 60.461 42.308 0.00 0.00 0.00 3.27
4841 10694 5.692204 CCATATAGTACCGAAGTTGCTTGAG 59.308 44.000 0.00 0.00 0.00 3.02
4842 10695 5.452776 CCCATATAGTACCGAAGTTGCTTGA 60.453 44.000 0.00 0.00 0.00 3.02
4843 10696 4.750098 CCCATATAGTACCGAAGTTGCTTG 59.250 45.833 0.00 0.00 0.00 4.01
4844 10697 4.202326 CCCCATATAGTACCGAAGTTGCTT 60.202 45.833 0.00 0.00 0.00 3.91
4845 10698 3.323979 CCCCATATAGTACCGAAGTTGCT 59.676 47.826 0.00 0.00 0.00 3.91
4846 10699 3.660865 CCCCATATAGTACCGAAGTTGC 58.339 50.000 0.00 0.00 0.00 4.17
4847 10700 3.660865 GCCCCATATAGTACCGAAGTTG 58.339 50.000 0.00 0.00 0.00 3.16
4848 10701 2.298163 CGCCCCATATAGTACCGAAGTT 59.702 50.000 0.00 0.00 0.00 2.66
4849 10702 1.891150 CGCCCCATATAGTACCGAAGT 59.109 52.381 0.00 0.00 0.00 3.01
4850 10703 1.203994 CCGCCCCATATAGTACCGAAG 59.796 57.143 0.00 0.00 0.00 3.79
4851 10704 1.259609 CCGCCCCATATAGTACCGAA 58.740 55.000 0.00 0.00 0.00 4.30
4852 10705 1.252904 GCCGCCCCATATAGTACCGA 61.253 60.000 0.00 0.00 0.00 4.69
4853 10706 1.217244 GCCGCCCCATATAGTACCG 59.783 63.158 0.00 0.00 0.00 4.02
4854 10707 0.981943 AAGCCGCCCCATATAGTACC 59.018 55.000 0.00 0.00 0.00 3.34
4855 10708 2.853235 AAAGCCGCCCCATATAGTAC 57.147 50.000 0.00 0.00 0.00 2.73
4856 10709 3.905591 ACTAAAAGCCGCCCCATATAGTA 59.094 43.478 0.00 0.00 0.00 1.82
4857 10710 2.709397 ACTAAAAGCCGCCCCATATAGT 59.291 45.455 0.00 0.00 0.00 2.12
4858 10711 3.074412 CACTAAAAGCCGCCCCATATAG 58.926 50.000 0.00 0.00 0.00 1.31
4859 10712 2.812613 GCACTAAAAGCCGCCCCATATA 60.813 50.000 0.00 0.00 0.00 0.86
4860 10713 1.981256 CACTAAAAGCCGCCCCATAT 58.019 50.000 0.00 0.00 0.00 1.78
4861 10714 0.750182 GCACTAAAAGCCGCCCCATA 60.750 55.000 0.00 0.00 0.00 2.74
4862 10715 2.052104 GCACTAAAAGCCGCCCCAT 61.052 57.895 0.00 0.00 0.00 4.00
4863 10716 2.675075 GCACTAAAAGCCGCCCCA 60.675 61.111 0.00 0.00 0.00 4.96
4864 10717 3.449227 GGCACTAAAAGCCGCCCC 61.449 66.667 0.00 0.00 43.15 5.80
4870 10723 0.110192 GCAGACGTGGCACTAAAAGC 60.110 55.000 16.72 9.37 0.00 3.51
4884 10737 5.241662 AGAACAAATAGGAAGTCTGCAGAC 58.758 41.667 34.82 34.82 45.08 3.51
4886 10739 5.486526 AGAGAACAAATAGGAAGTCTGCAG 58.513 41.667 7.63 7.63 0.00 4.41
4932 10785 2.046280 AGTCAACTTAGGAGGGCCTT 57.954 50.000 7.89 0.00 43.90 4.35
4961 10814 7.283354 TCGAGAGTCATAGTGTGATTACTTGAT 59.717 37.037 0.00 0.00 39.48 2.57
4986 10839 3.674997 TGAGGACAATGTTAGCCAACTC 58.325 45.455 0.00 0.00 35.56 3.01
4988 10841 3.412386 ACTGAGGACAATGTTAGCCAAC 58.588 45.455 0.00 0.00 35.06 3.77
5054 10907 2.925563 GCACATCAAAACCTATTGCAGC 59.074 45.455 0.00 0.00 0.00 5.25
5095 10953 6.852420 TGCCTACTCTACTATGAAAGTTGT 57.148 37.500 0.00 0.00 39.80 3.32
5099 10957 7.067615 TCTCAGTTGCCTACTCTACTATGAAAG 59.932 40.741 0.00 0.00 33.85 2.62
5125 10983 6.412214 ACTATTTACTTACTTGCCGGTGATT 58.588 36.000 1.90 0.00 0.00 2.57
5129 10987 6.406288 GGAGTACTATTTACTTACTTGCCGGT 60.406 42.308 1.90 0.00 0.00 5.28
5130 10988 5.981915 GGAGTACTATTTACTTACTTGCCGG 59.018 44.000 0.00 0.00 0.00 6.13
5131 10989 5.981915 GGGAGTACTATTTACTTACTTGCCG 59.018 44.000 0.00 0.00 0.00 5.69
5134 10992 7.067981 ACGGAGGGAGTACTATTTACTTACTTG 59.932 40.741 0.00 0.00 0.00 3.16
5196 11066 9.386010 TCAACTTTGTACTAACTTTGTGTGTAT 57.614 29.630 0.00 0.00 0.00 2.29
5197 11067 8.774890 TCAACTTTGTACTAACTTTGTGTGTA 57.225 30.769 0.00 0.00 0.00 2.90
5198 11068 7.389607 ACTCAACTTTGTACTAACTTTGTGTGT 59.610 33.333 10.69 5.84 0.00 3.72
5199 11069 7.748847 ACTCAACTTTGTACTAACTTTGTGTG 58.251 34.615 10.69 5.46 0.00 3.82
5200 11070 7.604927 TGACTCAACTTTGTACTAACTTTGTGT 59.395 33.333 11.03 11.03 0.00 3.72
5201 11071 7.903431 GTGACTCAACTTTGTACTAACTTTGTG 59.097 37.037 0.00 1.74 0.00 3.33
5202 11072 7.822822 AGTGACTCAACTTTGTACTAACTTTGT 59.177 33.333 0.00 0.00 0.00 2.83
5203 11073 8.197988 AGTGACTCAACTTTGTACTAACTTTG 57.802 34.615 0.00 0.00 0.00 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.