Multiple sequence alignment - TraesCS5D01G526600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G526600 chr5D 100.000 3272 0 0 1 3272 544458879 544462150 0.000000e+00 6043.0
1 TraesCS5D01G526600 chr5D 83.194 2029 247 54 549 2529 544481138 544483120 0.000000e+00 1772.0
2 TraesCS5D01G526600 chr5D 84.207 1545 209 19 993 2528 544532509 544534027 0.000000e+00 1469.0
3 TraesCS5D01G526600 chr5D 78.836 1271 254 12 999 2260 544148966 544150230 0.000000e+00 843.0
4 TraesCS5D01G526600 chr5D 92.935 368 26 0 1 368 544479307 544479674 1.340000e-148 536.0
5 TraesCS5D01G526600 chr5D 87.727 220 18 6 364 579 544531986 544532200 7.010000e-62 248.0
6 TraesCS5D01G526600 chr5D 95.652 115 5 0 701 815 544532204 544532318 5.580000e-43 185.0
7 TraesCS5D01G526600 chr5D 96.875 32 1 0 2489 2520 543777651 543777682 2.000000e-03 54.7
8 TraesCS5D01G526600 chr4A 96.039 2348 67 13 367 2713 624349884 624352206 0.000000e+00 3797.0
9 TraesCS5D01G526600 chr4A 82.887 1981 251 53 594 2529 624369233 624371170 0.000000e+00 1700.0
10 TraesCS5D01G526600 chr4A 99.185 368 3 0 1 368 624344245 624344612 0.000000e+00 664.0
11 TraesCS5D01G526600 chr4A 91.040 346 31 0 16 361 624229421 624229766 4.940000e-128 468.0
12 TraesCS5D01G526600 chr4A 91.159 328 29 0 1 328 624362536 624362863 2.320000e-121 446.0
13 TraesCS5D01G526600 chr4A 88.385 353 38 2 16 368 624142454 624142803 3.900000e-114 422.0
14 TraesCS5D01G526600 chr4A 87.296 307 29 6 367 670 624345734 624346033 3.130000e-90 342.0
15 TraesCS5D01G526600 chr4A 74.457 599 108 24 2004 2595 624431244 624431804 1.980000e-52 217.0
16 TraesCS5D01G526600 chr4A 88.889 54 5 1 2475 2528 625367070 625367018 7.580000e-07 65.8
17 TraesCS5D01G526600 chr5B 83.469 1718 219 38 608 2295 686769559 686771241 0.000000e+00 1539.0
18 TraesCS5D01G526600 chr5B 83.188 1719 223 41 608 2295 686761575 686763258 0.000000e+00 1513.0
19 TraesCS5D01G526600 chr5B 83.744 1581 221 22 959 2528 686849925 686851480 0.000000e+00 1463.0
20 TraesCS5D01G526600 chr5B 90.704 355 31 2 16 368 686458921 686459275 3.820000e-129 472.0
21 TraesCS5D01G526600 chr5B 87.572 346 29 6 16 361 686543261 686543592 3.960000e-104 388.0
22 TraesCS5D01G526600 chr5B 82.880 368 48 11 5 368 686473035 686472679 1.890000e-82 316.0
23 TraesCS5D01G526600 chr5B 89.640 222 14 6 364 579 686849456 686849674 1.160000e-69 274.0
24 TraesCS5D01G526600 chr5B 75.585 598 103 27 2004 2595 686649788 686650348 4.190000e-64 255.0
25 TraesCS5D01G526600 chr5B 90.435 115 4 1 701 815 686849678 686849785 9.460000e-31 145.0
26 TraesCS5D01G526600 chr5B 84.348 115 6 2 2603 2705 686747231 686747345 5.780000e-18 102.0
27 TraesCS5D01G526600 chrUn 83.283 1645 220 34 977 2595 252494908 252493293 0.000000e+00 1463.0
28 TraesCS5D01G526600 chrUn 83.924 367 52 6 5 368 48438982 48439344 8.690000e-91 344.0
29 TraesCS5D01G526600 chrUn 89.954 219 13 6 367 579 252495392 252495177 1.160000e-69 274.0
30 TraesCS5D01G526600 chrUn 89.831 118 5 1 701 818 252495173 252495063 9.460000e-31 145.0
31 TraesCS5D01G526600 chr1A 76.490 621 113 26 1793 2398 569680432 569679830 1.140000e-79 307.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G526600 chr5D 544458879 544462150 3271 False 6043.000000 6043 100.000000 1 3272 1 chr5D.!!$F3 3271
1 TraesCS5D01G526600 chr5D 544479307 544483120 3813 False 1154.000000 1772 88.064500 1 2529 2 chr5D.!!$F4 2528
2 TraesCS5D01G526600 chr5D 544148966 544150230 1264 False 843.000000 843 78.836000 999 2260 1 chr5D.!!$F2 1261
3 TraesCS5D01G526600 chr5D 544531986 544534027 2041 False 634.000000 1469 89.195333 364 2528 3 chr5D.!!$F5 2164
4 TraesCS5D01G526600 chr4A 624369233 624371170 1937 False 1700.000000 1700 82.887000 594 2529 1 chr4A.!!$F4 1935
5 TraesCS5D01G526600 chr4A 624344245 624352206 7961 False 1601.000000 3797 94.173333 1 2713 3 chr4A.!!$F6 2712
6 TraesCS5D01G526600 chr4A 624431244 624431804 560 False 217.000000 217 74.457000 2004 2595 1 chr4A.!!$F5 591
7 TraesCS5D01G526600 chr5B 686769559 686771241 1682 False 1539.000000 1539 83.469000 608 2295 1 chr5B.!!$F6 1687
8 TraesCS5D01G526600 chr5B 686761575 686763258 1683 False 1513.000000 1513 83.188000 608 2295 1 chr5B.!!$F5 1687
9 TraesCS5D01G526600 chr5B 686849456 686851480 2024 False 627.333333 1463 87.939667 364 2528 3 chr5B.!!$F7 2164
10 TraesCS5D01G526600 chr5B 686649788 686650348 560 False 255.000000 255 75.585000 2004 2595 1 chr5B.!!$F3 591
11 TraesCS5D01G526600 chrUn 252493293 252495392 2099 True 627.333333 1463 87.689333 367 2595 3 chrUn.!!$R1 2228
12 TraesCS5D01G526600 chr1A 569679830 569680432 602 True 307.000000 307 76.490000 1793 2398 1 chr1A.!!$R1 605

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
138 139 1.673665 CACTTGGACAGCAGCTCCC 60.674 63.158 0.0 0.0 0.00 4.30 F
1443 7316 1.071385 CTCACCTTGCTGGACTTGTCT 59.929 52.381 3.4 0.0 39.71 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1776 7652 0.322277 AGTAGCGAAGGTGGTCGAGA 60.322 55.0 0.00 0.0 43.86 4.04 R
3134 9157 0.035439 CCCGGGCTCATTACTTGTGT 60.035 55.0 8.08 0.0 0.00 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
138 139 1.673665 CACTTGGACAGCAGCTCCC 60.674 63.158 0.00 0.00 0.00 4.30
575 6311 7.508296 AGCAATGCCTGGATATTCTTCTATTTT 59.492 33.333 0.00 0.00 0.00 1.82
670 6420 3.207777 ACAGTAGGATGGGACCAGTAGAT 59.792 47.826 0.00 0.00 0.00 1.98
744 6509 3.960102 ACCTGAAAATCAAGTTTGGCAGA 59.040 39.130 0.00 0.00 36.16 4.26
1443 7316 1.071385 CTCACCTTGCTGGACTTGTCT 59.929 52.381 3.40 0.00 39.71 3.41
1711 7587 1.855295 TAGCCTCGTGGATTGTACCA 58.145 50.000 7.92 0.00 37.63 3.25
1734 7610 1.670406 CAAGTCGCTCAGCCTTGCT 60.670 57.895 3.07 0.00 40.77 3.91
1776 7652 2.260434 CCGTCGTGGGTTCGTGAT 59.740 61.111 0.00 0.00 0.00 3.06
1929 7810 7.442364 CCATTGTATGTGAAGTGTAATAGGAGG 59.558 40.741 0.00 0.00 0.00 4.30
2367 8362 1.347050 CAATCACATGTTGGGGCCAAA 59.653 47.619 4.39 0.00 37.70 3.28
2529 8549 3.120321 TGTAGACCAAGCGTGATTTGT 57.880 42.857 0.00 0.00 0.00 2.83
2600 8620 4.913924 GTGATGTGTGATGCTTTCAAGAAC 59.086 41.667 0.00 0.00 35.70 3.01
2605 8625 1.536766 TGATGCTTTCAAGAACAGCCG 59.463 47.619 11.60 0.00 32.11 5.52
2606 8626 1.537202 GATGCTTTCAAGAACAGCCGT 59.463 47.619 11.60 4.42 32.11 5.68
2607 8627 0.662619 TGCTTTCAAGAACAGCCGTG 59.337 50.000 11.60 0.00 32.11 4.94
2608 8628 0.661483 GCTTTCAAGAACAGCCGTGC 60.661 55.000 0.00 0.00 0.00 5.34
2609 8629 0.947244 CTTTCAAGAACAGCCGTGCT 59.053 50.000 0.00 0.00 40.77 4.40
2610 8630 2.143122 CTTTCAAGAACAGCCGTGCTA 58.857 47.619 0.00 0.00 36.40 3.49
2611 8631 1.795768 TTCAAGAACAGCCGTGCTAG 58.204 50.000 0.00 0.00 36.40 3.42
2612 8632 0.966179 TCAAGAACAGCCGTGCTAGA 59.034 50.000 0.00 0.00 36.40 2.43
2613 8633 1.071605 CAAGAACAGCCGTGCTAGAC 58.928 55.000 0.00 0.00 36.40 2.59
2614 8634 0.969894 AAGAACAGCCGTGCTAGACT 59.030 50.000 0.00 0.00 36.40 3.24
2615 8635 0.969894 AGAACAGCCGTGCTAGACTT 59.030 50.000 0.00 0.00 36.40 3.01
2616 8636 1.344763 AGAACAGCCGTGCTAGACTTT 59.655 47.619 0.00 0.00 36.40 2.66
2617 8637 2.143925 GAACAGCCGTGCTAGACTTTT 58.856 47.619 0.00 0.00 36.40 2.27
2618 8638 1.512926 ACAGCCGTGCTAGACTTTTG 58.487 50.000 0.00 0.00 36.40 2.44
2619 8639 0.166814 CAGCCGTGCTAGACTTTTGC 59.833 55.000 0.00 0.00 36.40 3.68
2620 8640 0.035458 AGCCGTGCTAGACTTTTGCT 59.965 50.000 0.00 0.00 36.99 3.91
2621 8641 0.444260 GCCGTGCTAGACTTTTGCTC 59.556 55.000 0.00 0.00 0.00 4.26
2622 8642 1.795768 CCGTGCTAGACTTTTGCTCA 58.204 50.000 0.00 0.00 0.00 4.26
2623 8643 1.728971 CCGTGCTAGACTTTTGCTCAG 59.271 52.381 0.00 0.00 0.00 3.35
2624 8644 2.610479 CCGTGCTAGACTTTTGCTCAGA 60.610 50.000 0.00 0.00 0.00 3.27
2661 8684 2.816087 ACTCCATTGTGTTGACATCAGC 59.184 45.455 0.00 0.00 30.13 4.26
2673 8696 5.066375 TGTTGACATCAGCTATTATGCAACC 59.934 40.000 22.43 14.22 38.23 3.77
2674 8697 4.136796 TGACATCAGCTATTATGCAACCC 58.863 43.478 0.00 0.00 34.99 4.11
2724 8747 2.029838 CTGTAAGGCAGGCTAACAGG 57.970 55.000 0.00 0.00 41.42 4.00
2725 8748 1.279271 CTGTAAGGCAGGCTAACAGGT 59.721 52.381 0.00 0.00 41.42 4.00
2726 8749 1.003118 TGTAAGGCAGGCTAACAGGTG 59.997 52.381 0.00 0.00 0.00 4.00
2727 8750 1.003233 GTAAGGCAGGCTAACAGGTGT 59.997 52.381 0.00 0.00 0.00 4.16
2728 8751 0.478507 AAGGCAGGCTAACAGGTGTT 59.521 50.000 0.00 0.24 41.73 3.32
2729 8752 0.036875 AGGCAGGCTAACAGGTGTTC 59.963 55.000 0.00 0.00 39.31 3.18
2730 8753 0.250727 GGCAGGCTAACAGGTGTTCA 60.251 55.000 0.00 0.00 39.31 3.18
2731 8754 1.160137 GCAGGCTAACAGGTGTTCAG 58.840 55.000 0.00 0.00 39.31 3.02
2732 8755 1.543429 GCAGGCTAACAGGTGTTCAGT 60.543 52.381 0.00 0.00 39.31 3.41
2733 8756 2.851195 CAGGCTAACAGGTGTTCAGTT 58.149 47.619 0.00 0.00 39.31 3.16
2734 8757 2.808543 CAGGCTAACAGGTGTTCAGTTC 59.191 50.000 0.00 0.00 39.31 3.01
2735 8758 1.798813 GGCTAACAGGTGTTCAGTTCG 59.201 52.381 0.00 0.00 39.31 3.95
2736 8759 1.798813 GCTAACAGGTGTTCAGTTCGG 59.201 52.381 0.00 0.00 39.31 4.30
2737 8760 2.805657 GCTAACAGGTGTTCAGTTCGGT 60.806 50.000 0.00 0.00 39.31 4.69
2738 8761 1.949465 AACAGGTGTTCAGTTCGGTC 58.051 50.000 0.00 0.00 31.64 4.79
2739 8762 1.120530 ACAGGTGTTCAGTTCGGTCT 58.879 50.000 0.00 0.00 0.00 3.85
2740 8763 1.068741 ACAGGTGTTCAGTTCGGTCTC 59.931 52.381 0.00 0.00 0.00 3.36
2741 8764 1.341531 CAGGTGTTCAGTTCGGTCTCT 59.658 52.381 0.00 0.00 0.00 3.10
2742 8765 1.341531 AGGTGTTCAGTTCGGTCTCTG 59.658 52.381 0.00 0.00 0.00 3.35
2743 8766 1.340248 GGTGTTCAGTTCGGTCTCTGA 59.660 52.381 0.00 0.00 38.66 3.27
2744 8767 2.395654 GTGTTCAGTTCGGTCTCTGAC 58.604 52.381 0.00 0.00 39.87 3.51
2745 8768 2.028876 TGTTCAGTTCGGTCTCTGACA 58.971 47.619 0.07 0.00 39.87 3.58
2746 8769 2.223735 TGTTCAGTTCGGTCTCTGACAC 60.224 50.000 0.07 0.00 39.87 3.67
2747 8770 0.591659 TCAGTTCGGTCTCTGACACG 59.408 55.000 0.07 2.04 36.04 4.49
2748 8771 0.387367 CAGTTCGGTCTCTGACACGG 60.387 60.000 0.07 0.00 33.68 4.94
2749 8772 0.536687 AGTTCGGTCTCTGACACGGA 60.537 55.000 0.07 0.00 33.68 4.69
2750 8773 0.109689 GTTCGGTCTCTGACACGGAG 60.110 60.000 0.00 0.00 38.15 4.63
2751 8774 1.241990 TTCGGTCTCTGACACGGAGG 61.242 60.000 7.59 0.00 37.46 4.30
2752 8775 2.574399 GGTCTCTGACACGGAGGC 59.426 66.667 7.59 5.81 40.41 4.70
2753 8776 2.276116 GGTCTCTGACACGGAGGCA 61.276 63.158 13.02 0.00 42.67 4.75
2754 8777 1.666011 GTCTCTGACACGGAGGCAA 59.334 57.895 7.23 0.00 40.79 4.52
2755 8778 0.667792 GTCTCTGACACGGAGGCAAC 60.668 60.000 7.23 0.00 40.79 4.17
2756 8779 1.734477 CTCTGACACGGAGGCAACG 60.734 63.158 0.00 0.00 46.39 4.10
2757 8780 2.142357 CTCTGACACGGAGGCAACGA 62.142 60.000 7.83 0.00 46.39 3.85
2758 8781 1.300620 CTGACACGGAGGCAACGAA 60.301 57.895 7.83 0.00 46.39 3.85
2759 8782 1.284982 CTGACACGGAGGCAACGAAG 61.285 60.000 7.83 2.90 46.39 3.79
2760 8783 2.665185 ACACGGAGGCAACGAAGC 60.665 61.111 7.83 0.00 46.39 3.86
2761 8784 2.357517 CACGGAGGCAACGAAGCT 60.358 61.111 7.83 0.00 46.39 3.74
2762 8785 2.357517 ACGGAGGCAACGAAGCTG 60.358 61.111 7.83 0.00 46.39 4.24
2763 8786 3.121030 CGGAGGCAACGAAGCTGG 61.121 66.667 0.00 0.00 46.39 4.85
2767 8790 4.410743 GGCAACGAAGCTGGCTGC 62.411 66.667 8.47 8.47 46.01 5.25
2768 8791 3.663176 GCAACGAAGCTGGCTGCA 61.663 61.111 18.84 0.00 45.94 4.41
2769 8792 2.986306 GCAACGAAGCTGGCTGCAT 61.986 57.895 18.84 6.46 45.94 3.96
2770 8793 1.154093 CAACGAAGCTGGCTGCATG 60.154 57.895 18.84 9.66 45.94 4.06
2771 8794 2.986306 AACGAAGCTGGCTGCATGC 61.986 57.895 18.84 11.82 45.94 4.06
2780 8803 3.285371 GCTGCATGCCAAGCTTCT 58.715 55.556 19.78 0.00 35.15 2.85
2781 8804 1.153823 GCTGCATGCCAAGCTTCTG 60.154 57.895 19.78 0.00 35.15 3.02
2782 8805 1.592400 GCTGCATGCCAAGCTTCTGA 61.592 55.000 19.78 0.00 35.15 3.27
2783 8806 0.170561 CTGCATGCCAAGCTTCTGAC 59.829 55.000 16.68 0.00 0.00 3.51
2784 8807 1.136147 GCATGCCAAGCTTCTGACG 59.864 57.895 6.36 0.00 0.00 4.35
2785 8808 1.136147 CATGCCAAGCTTCTGACGC 59.864 57.895 0.00 0.00 0.00 5.19
2786 8809 1.002868 ATGCCAAGCTTCTGACGCT 60.003 52.632 2.42 2.42 39.94 5.07
2787 8810 1.303799 ATGCCAAGCTTCTGACGCTG 61.304 55.000 9.57 4.38 37.87 5.18
2788 8811 1.963338 GCCAAGCTTCTGACGCTGT 60.963 57.895 9.57 0.00 37.87 4.40
2789 8812 0.670546 GCCAAGCTTCTGACGCTGTA 60.671 55.000 9.57 0.00 37.87 2.74
2790 8813 1.071605 CCAAGCTTCTGACGCTGTAC 58.928 55.000 9.57 0.00 37.87 2.90
2791 8814 1.337260 CCAAGCTTCTGACGCTGTACT 60.337 52.381 9.57 0.00 37.87 2.73
2792 8815 1.723542 CAAGCTTCTGACGCTGTACTG 59.276 52.381 9.57 0.54 37.87 2.74
2793 8816 0.962489 AGCTTCTGACGCTGTACTGT 59.038 50.000 7.95 0.00 36.15 3.55
2794 8817 2.160205 AGCTTCTGACGCTGTACTGTA 58.840 47.619 7.95 0.00 36.15 2.74
2795 8818 2.557056 AGCTTCTGACGCTGTACTGTAA 59.443 45.455 7.95 0.00 36.15 2.41
2796 8819 3.193691 AGCTTCTGACGCTGTACTGTAAT 59.806 43.478 7.95 0.00 36.15 1.89
2797 8820 4.398358 AGCTTCTGACGCTGTACTGTAATA 59.602 41.667 7.95 0.00 36.15 0.98
2798 8821 4.499758 GCTTCTGACGCTGTACTGTAATAC 59.500 45.833 0.00 0.00 0.00 1.89
2799 8822 5.676584 GCTTCTGACGCTGTACTGTAATACT 60.677 44.000 0.00 0.00 0.00 2.12
2800 8823 5.481200 TCTGACGCTGTACTGTAATACTC 57.519 43.478 1.46 0.00 0.00 2.59
2801 8824 4.939439 TCTGACGCTGTACTGTAATACTCA 59.061 41.667 1.46 0.00 0.00 3.41
2802 8825 5.413523 TCTGACGCTGTACTGTAATACTCAA 59.586 40.000 1.46 0.00 0.00 3.02
2803 8826 5.396484 TGACGCTGTACTGTAATACTCAAC 58.604 41.667 1.46 0.00 0.00 3.18
2804 8827 5.182570 TGACGCTGTACTGTAATACTCAACT 59.817 40.000 1.46 0.00 0.00 3.16
2805 8828 6.372381 TGACGCTGTACTGTAATACTCAACTA 59.628 38.462 1.46 0.00 0.00 2.24
2806 8829 6.549952 ACGCTGTACTGTAATACTCAACTAC 58.450 40.000 1.46 0.00 0.00 2.73
2807 8830 6.373774 ACGCTGTACTGTAATACTCAACTACT 59.626 38.462 1.46 0.00 0.00 2.57
2808 8831 7.094463 ACGCTGTACTGTAATACTCAACTACTT 60.094 37.037 1.46 0.00 0.00 2.24
2809 8832 8.393366 CGCTGTACTGTAATACTCAACTACTTA 58.607 37.037 1.46 0.00 0.00 2.24
2815 8838 9.298774 ACTGTAATACTCAACTACTTATTTCGC 57.701 33.333 0.00 0.00 0.00 4.70
2816 8839 8.331539 TGTAATACTCAACTACTTATTTCGCG 57.668 34.615 0.00 0.00 0.00 5.87
2817 8840 6.823678 AATACTCAACTACTTATTTCGCGG 57.176 37.500 6.13 0.00 0.00 6.46
2818 8841 2.928116 ACTCAACTACTTATTTCGCGGC 59.072 45.455 6.13 0.00 0.00 6.53
2819 8842 2.927477 CTCAACTACTTATTTCGCGGCA 59.073 45.455 6.13 0.00 0.00 5.69
2820 8843 3.327626 TCAACTACTTATTTCGCGGCAA 58.672 40.909 6.13 0.00 0.00 4.52
2821 8844 3.936453 TCAACTACTTATTTCGCGGCAAT 59.064 39.130 6.13 8.01 0.00 3.56
2822 8845 4.393680 TCAACTACTTATTTCGCGGCAATT 59.606 37.500 6.13 0.00 0.00 2.32
2823 8846 4.273005 ACTACTTATTTCGCGGCAATTG 57.727 40.909 6.13 0.00 0.00 2.32
2824 8847 1.908065 ACTTATTTCGCGGCAATTGC 58.092 45.000 22.47 22.47 41.14 3.56
2825 8848 1.472480 ACTTATTTCGCGGCAATTGCT 59.528 42.857 28.42 10.61 41.70 3.91
2826 8849 2.680841 ACTTATTTCGCGGCAATTGCTA 59.319 40.909 28.42 9.59 41.70 3.49
2827 8850 3.315191 ACTTATTTCGCGGCAATTGCTAT 59.685 39.130 28.42 14.55 41.70 2.97
2828 8851 2.405892 ATTTCGCGGCAATTGCTATC 57.594 45.000 28.42 16.46 41.70 2.08
2829 8852 1.378531 TTTCGCGGCAATTGCTATCT 58.621 45.000 28.42 0.00 41.70 1.98
2830 8853 1.378531 TTCGCGGCAATTGCTATCTT 58.621 45.000 28.42 0.00 41.70 2.40
2831 8854 0.657312 TCGCGGCAATTGCTATCTTG 59.343 50.000 28.42 13.33 41.70 3.02
2832 8855 0.378257 CGCGGCAATTGCTATCTTGT 59.622 50.000 28.42 0.00 41.70 3.16
2833 8856 1.595489 CGCGGCAATTGCTATCTTGTC 60.595 52.381 28.42 9.44 41.70 3.18
2834 8857 1.268743 GCGGCAATTGCTATCTTGTCC 60.269 52.381 28.42 8.73 41.70 4.02
2835 8858 2.016318 CGGCAATTGCTATCTTGTCCA 58.984 47.619 28.42 0.00 41.70 4.02
2836 8859 2.032550 CGGCAATTGCTATCTTGTCCAG 59.967 50.000 28.42 3.37 41.70 3.86
2837 8860 2.360165 GGCAATTGCTATCTTGTCCAGG 59.640 50.000 28.42 0.00 41.70 4.45
2838 8861 2.223665 GCAATTGCTATCTTGTCCAGGC 60.224 50.000 23.21 0.00 38.21 4.85
2839 8862 3.285484 CAATTGCTATCTTGTCCAGGCT 58.715 45.455 0.00 0.00 0.00 4.58
2840 8863 2.698855 TTGCTATCTTGTCCAGGCTC 57.301 50.000 0.00 0.00 0.00 4.70
2841 8864 1.571955 TGCTATCTTGTCCAGGCTCA 58.428 50.000 0.00 0.00 0.00 4.26
2842 8865 2.121948 TGCTATCTTGTCCAGGCTCAT 58.878 47.619 0.00 0.00 0.00 2.90
2843 8866 2.103771 TGCTATCTTGTCCAGGCTCATC 59.896 50.000 0.00 0.00 0.00 2.92
2844 8867 2.368221 GCTATCTTGTCCAGGCTCATCT 59.632 50.000 0.00 0.00 0.00 2.90
2845 8868 3.554752 GCTATCTTGTCCAGGCTCATCTC 60.555 52.174 0.00 0.00 0.00 2.75
2846 8869 0.820226 TCTTGTCCAGGCTCATCTCG 59.180 55.000 0.00 0.00 0.00 4.04
2847 8870 0.534412 CTTGTCCAGGCTCATCTCGT 59.466 55.000 0.00 0.00 0.00 4.18
2848 8871 0.532573 TTGTCCAGGCTCATCTCGTC 59.467 55.000 0.00 0.00 0.00 4.20
2849 8872 1.323271 TGTCCAGGCTCATCTCGTCC 61.323 60.000 0.00 0.00 0.00 4.79
2850 8873 1.040339 GTCCAGGCTCATCTCGTCCT 61.040 60.000 0.00 0.00 0.00 3.85
2851 8874 1.039785 TCCAGGCTCATCTCGTCCTG 61.040 60.000 0.00 0.00 44.25 3.86
2852 8875 1.039785 CCAGGCTCATCTCGTCCTGA 61.040 60.000 8.56 0.00 46.80 3.86
2853 8876 1.039068 CAGGCTCATCTCGTCCTGAT 58.961 55.000 1.09 0.00 46.80 2.90
2854 8877 1.039068 AGGCTCATCTCGTCCTGATG 58.961 55.000 0.00 0.00 41.75 3.07
2855 8878 1.035923 GGCTCATCTCGTCCTGATGA 58.964 55.000 6.31 6.31 45.33 2.92
2856 8879 1.410517 GGCTCATCTCGTCCTGATGAA 59.589 52.381 7.65 0.00 46.30 2.57
2857 8880 2.036992 GGCTCATCTCGTCCTGATGAAT 59.963 50.000 7.65 0.00 46.30 2.57
2858 8881 3.256879 GGCTCATCTCGTCCTGATGAATA 59.743 47.826 7.65 0.00 46.30 1.75
2859 8882 4.484236 GCTCATCTCGTCCTGATGAATAG 58.516 47.826 7.65 0.00 46.30 1.73
2860 8883 4.022416 GCTCATCTCGTCCTGATGAATAGT 60.022 45.833 7.65 0.00 46.30 2.12
2861 8884 5.182190 GCTCATCTCGTCCTGATGAATAGTA 59.818 44.000 7.65 0.00 46.30 1.82
2862 8885 6.294231 GCTCATCTCGTCCTGATGAATAGTAA 60.294 42.308 7.65 0.00 46.30 2.24
2863 8886 7.582667 TCATCTCGTCCTGATGAATAGTAAA 57.417 36.000 4.22 0.00 44.79 2.01
2864 8887 8.183104 TCATCTCGTCCTGATGAATAGTAAAT 57.817 34.615 4.22 0.00 44.79 1.40
2865 8888 8.642432 TCATCTCGTCCTGATGAATAGTAAATT 58.358 33.333 4.22 0.00 44.79 1.82
2866 8889 9.265901 CATCTCGTCCTGATGAATAGTAAATTT 57.734 33.333 0.00 0.00 42.68 1.82
2867 8890 9.838339 ATCTCGTCCTGATGAATAGTAAATTTT 57.162 29.630 0.00 0.00 0.00 1.82
2868 8891 9.098355 TCTCGTCCTGATGAATAGTAAATTTTG 57.902 33.333 0.00 0.00 0.00 2.44
2869 8892 9.098355 CTCGTCCTGATGAATAGTAAATTTTGA 57.902 33.333 0.00 0.00 0.00 2.69
2870 8893 8.879759 TCGTCCTGATGAATAGTAAATTTTGAC 58.120 33.333 0.00 0.00 0.00 3.18
2871 8894 8.664798 CGTCCTGATGAATAGTAAATTTTGACA 58.335 33.333 0.00 0.00 0.00 3.58
2926 8949 2.825861 CTTGGGAGCACTGCAAATTT 57.174 45.000 3.30 0.00 0.00 1.82
2927 8950 3.116079 CTTGGGAGCACTGCAAATTTT 57.884 42.857 3.30 0.00 0.00 1.82
2928 8951 3.469739 CTTGGGAGCACTGCAAATTTTT 58.530 40.909 3.30 0.00 0.00 1.94
2929 8952 2.836262 TGGGAGCACTGCAAATTTTTG 58.164 42.857 3.30 0.00 41.03 2.44
2930 8953 2.170187 TGGGAGCACTGCAAATTTTTGT 59.830 40.909 3.30 0.00 40.24 2.83
2931 8954 3.205338 GGGAGCACTGCAAATTTTTGTT 58.795 40.909 3.30 0.00 40.24 2.83
2932 8955 3.248363 GGGAGCACTGCAAATTTTTGTTC 59.752 43.478 3.30 0.00 40.24 3.18
2933 8956 4.122046 GGAGCACTGCAAATTTTTGTTCT 58.878 39.130 3.30 0.00 40.24 3.01
2934 8957 4.025480 GGAGCACTGCAAATTTTTGTTCTG 60.025 41.667 3.30 0.06 40.24 3.02
2935 8958 4.506758 AGCACTGCAAATTTTTGTTCTGT 58.493 34.783 3.30 0.00 40.24 3.41
2936 8959 4.937015 AGCACTGCAAATTTTTGTTCTGTT 59.063 33.333 3.30 0.00 40.24 3.16
2937 8960 5.412286 AGCACTGCAAATTTTTGTTCTGTTT 59.588 32.000 3.30 0.00 40.24 2.83
2938 8961 5.508922 GCACTGCAAATTTTTGTTCTGTTTG 59.491 36.000 5.05 0.00 40.24 2.93
2939 8962 6.022821 CACTGCAAATTTTTGTTCTGTTTGG 58.977 36.000 5.05 0.00 40.24 3.28
2940 8963 5.936956 ACTGCAAATTTTTGTTCTGTTTGGA 59.063 32.000 5.05 0.00 40.24 3.53
2941 8964 6.128309 ACTGCAAATTTTTGTTCTGTTTGGAC 60.128 34.615 5.05 0.00 40.24 4.02
2942 8965 5.702670 TGCAAATTTTTGTTCTGTTTGGACA 59.297 32.000 5.05 0.00 40.24 4.02
2943 8966 6.373774 TGCAAATTTTTGTTCTGTTTGGACAT 59.626 30.769 5.05 0.00 40.24 3.06
2944 8967 7.094463 TGCAAATTTTTGTTCTGTTTGGACATT 60.094 29.630 5.05 0.00 40.24 2.71
2945 8968 7.429051 GCAAATTTTTGTTCTGTTTGGACATTC 59.571 33.333 5.05 0.00 40.24 2.67
2946 8969 6.826893 ATTTTTGTTCTGTTTGGACATTCG 57.173 33.333 0.00 0.00 34.72 3.34
2947 8970 5.568685 TTTTGTTCTGTTTGGACATTCGA 57.431 34.783 0.00 0.00 34.72 3.71
2948 8971 5.766150 TTTGTTCTGTTTGGACATTCGAT 57.234 34.783 0.00 0.00 34.72 3.59
2949 8972 4.747540 TGTTCTGTTTGGACATTCGATG 57.252 40.909 0.00 0.00 34.72 3.84
2950 8973 4.384940 TGTTCTGTTTGGACATTCGATGA 58.615 39.130 0.00 0.00 34.72 2.92
2951 8974 4.452114 TGTTCTGTTTGGACATTCGATGAG 59.548 41.667 0.00 0.00 34.72 2.90
2952 8975 3.599343 TCTGTTTGGACATTCGATGAGG 58.401 45.455 0.00 0.00 34.72 3.86
2953 8976 3.007940 TCTGTTTGGACATTCGATGAGGT 59.992 43.478 0.00 0.00 34.72 3.85
2954 8977 3.750371 TGTTTGGACATTCGATGAGGTT 58.250 40.909 0.00 0.00 0.00 3.50
2955 8978 3.501828 TGTTTGGACATTCGATGAGGTTG 59.498 43.478 0.00 0.00 0.00 3.77
2956 8979 1.737838 TGGACATTCGATGAGGTTGC 58.262 50.000 0.00 0.00 0.00 4.17
2957 8980 0.652592 GGACATTCGATGAGGTTGCG 59.347 55.000 0.00 0.00 0.00 4.85
2958 8981 0.652592 GACATTCGATGAGGTTGCGG 59.347 55.000 0.00 0.00 0.00 5.69
2959 8982 0.744414 ACATTCGATGAGGTTGCGGG 60.744 55.000 0.00 0.00 0.00 6.13
2960 8983 0.461870 CATTCGATGAGGTTGCGGGA 60.462 55.000 0.00 0.00 0.00 5.14
2961 8984 0.251916 ATTCGATGAGGTTGCGGGAA 59.748 50.000 0.00 0.00 0.00 3.97
2962 8985 0.035598 TTCGATGAGGTTGCGGGAAA 59.964 50.000 0.00 0.00 0.00 3.13
2963 8986 0.035598 TCGATGAGGTTGCGGGAAAA 59.964 50.000 0.00 0.00 0.00 2.29
2964 8987 0.878416 CGATGAGGTTGCGGGAAAAA 59.122 50.000 0.00 0.00 0.00 1.94
2965 8988 1.472480 CGATGAGGTTGCGGGAAAAAT 59.528 47.619 0.00 0.00 0.00 1.82
2966 8989 2.680841 CGATGAGGTTGCGGGAAAAATA 59.319 45.455 0.00 0.00 0.00 1.40
2967 8990 3.127895 CGATGAGGTTGCGGGAAAAATAA 59.872 43.478 0.00 0.00 0.00 1.40
2968 8991 4.380023 CGATGAGGTTGCGGGAAAAATAAA 60.380 41.667 0.00 0.00 0.00 1.40
2969 8992 4.939052 TGAGGTTGCGGGAAAAATAAAA 57.061 36.364 0.00 0.00 0.00 1.52
2970 8993 5.476091 TGAGGTTGCGGGAAAAATAAAAT 57.524 34.783 0.00 0.00 0.00 1.82
2971 8994 5.474825 TGAGGTTGCGGGAAAAATAAAATC 58.525 37.500 0.00 0.00 0.00 2.17
2972 8995 5.011125 TGAGGTTGCGGGAAAAATAAAATCA 59.989 36.000 0.00 0.00 0.00 2.57
2973 8996 6.048732 AGGTTGCGGGAAAAATAAAATCAT 57.951 33.333 0.00 0.00 0.00 2.45
2974 8997 5.874261 AGGTTGCGGGAAAAATAAAATCATG 59.126 36.000 0.00 0.00 0.00 3.07
2975 8998 5.641636 GGTTGCGGGAAAAATAAAATCATGT 59.358 36.000 0.00 0.00 0.00 3.21
2976 8999 6.183360 GGTTGCGGGAAAAATAAAATCATGTC 60.183 38.462 0.00 0.00 0.00 3.06
2977 9000 6.279513 TGCGGGAAAAATAAAATCATGTCT 57.720 33.333 0.00 0.00 0.00 3.41
2978 9001 7.397892 TGCGGGAAAAATAAAATCATGTCTA 57.602 32.000 0.00 0.00 0.00 2.59
2979 9002 7.831753 TGCGGGAAAAATAAAATCATGTCTAA 58.168 30.769 0.00 0.00 0.00 2.10
2980 9003 8.474025 TGCGGGAAAAATAAAATCATGTCTAAT 58.526 29.630 0.00 0.00 0.00 1.73
2981 9004 9.959749 GCGGGAAAAATAAAATCATGTCTAATA 57.040 29.630 0.00 0.00 0.00 0.98
3006 9029 8.862550 AGTGCATTCTTTAAAGTTTCTTTGAG 57.137 30.769 14.74 3.95 0.00 3.02
3007 9030 8.686334 AGTGCATTCTTTAAAGTTTCTTTGAGA 58.314 29.630 14.74 5.81 0.00 3.27
3008 9031 8.962111 GTGCATTCTTTAAAGTTTCTTTGAGAG 58.038 33.333 14.74 1.70 0.00 3.20
3009 9032 7.649306 TGCATTCTTTAAAGTTTCTTTGAGAGC 59.351 33.333 14.74 8.69 0.00 4.09
3010 9033 7.115520 GCATTCTTTAAAGTTTCTTTGAGAGCC 59.884 37.037 14.74 0.11 0.00 4.70
3011 9034 7.639113 TTCTTTAAAGTTTCTTTGAGAGCCA 57.361 32.000 14.74 0.00 0.00 4.75
3012 9035 7.639113 TCTTTAAAGTTTCTTTGAGAGCCAA 57.361 32.000 14.74 0.00 0.00 4.52
3013 9036 8.237811 TCTTTAAAGTTTCTTTGAGAGCCAAT 57.762 30.769 14.74 0.00 34.23 3.16
3014 9037 8.695456 TCTTTAAAGTTTCTTTGAGAGCCAATT 58.305 29.630 14.74 0.00 34.23 2.32
3015 9038 9.317936 CTTTAAAGTTTCTTTGAGAGCCAATTT 57.682 29.630 7.07 0.00 34.23 1.82
3016 9039 9.665719 TTTAAAGTTTCTTTGAGAGCCAATTTT 57.334 25.926 5.19 0.00 34.23 1.82
3017 9040 9.665719 TTAAAGTTTCTTTGAGAGCCAATTTTT 57.334 25.926 5.19 0.00 34.23 1.94
3036 9059 1.757682 TTTTTGTGCCACGACCTTCT 58.242 45.000 0.00 0.00 0.00 2.85
3037 9060 1.305201 TTTTGTGCCACGACCTTCTC 58.695 50.000 0.00 0.00 0.00 2.87
3039 9062 1.740332 TTGTGCCACGACCTTCTCGA 61.740 55.000 0.00 0.00 46.14 4.04
3040 9063 1.006571 GTGCCACGACCTTCTCGAA 60.007 57.895 0.00 0.00 46.14 3.71
3041 9064 0.389948 GTGCCACGACCTTCTCGAAT 60.390 55.000 0.00 0.00 46.14 3.34
3042 9065 0.389817 TGCCACGACCTTCTCGAATG 60.390 55.000 0.00 0.00 46.14 2.67
3043 9066 0.389948 GCCACGACCTTCTCGAATGT 60.390 55.000 0.00 0.00 46.14 2.71
3044 9067 1.630148 CCACGACCTTCTCGAATGTC 58.370 55.000 0.00 5.37 46.14 3.06
3045 9068 1.630148 CACGACCTTCTCGAATGTCC 58.370 55.000 8.74 0.00 46.14 4.02
3046 9069 1.067846 CACGACCTTCTCGAATGTCCA 60.068 52.381 8.74 0.00 46.14 4.02
3047 9070 1.616865 ACGACCTTCTCGAATGTCCAA 59.383 47.619 8.74 0.00 46.14 3.53
3048 9071 2.036733 ACGACCTTCTCGAATGTCCAAA 59.963 45.455 8.74 0.00 46.14 3.28
3049 9072 3.064207 CGACCTTCTCGAATGTCCAAAA 58.936 45.455 8.74 0.00 46.14 2.44
3050 9073 3.120649 CGACCTTCTCGAATGTCCAAAAC 60.121 47.826 8.74 0.00 46.14 2.43
3051 9074 3.813166 GACCTTCTCGAATGTCCAAAACA 59.187 43.478 4.38 0.00 43.51 2.83
3052 9075 4.204012 ACCTTCTCGAATGTCCAAAACAA 58.796 39.130 0.00 0.00 42.37 2.83
3053 9076 4.036380 ACCTTCTCGAATGTCCAAAACAAC 59.964 41.667 0.00 0.00 42.37 3.32
3054 9077 4.036262 CCTTCTCGAATGTCCAAAACAACA 59.964 41.667 0.00 0.00 42.37 3.33
3055 9078 4.545823 TCTCGAATGTCCAAAACAACAC 57.454 40.909 0.00 0.00 42.37 3.32
3056 9079 3.942115 TCTCGAATGTCCAAAACAACACA 59.058 39.130 0.00 0.00 42.37 3.72
3057 9080 4.578516 TCTCGAATGTCCAAAACAACACAT 59.421 37.500 0.00 0.00 42.37 3.21
3058 9081 5.067153 TCTCGAATGTCCAAAACAACACATT 59.933 36.000 0.00 0.00 42.37 2.71
3059 9082 5.655488 TCGAATGTCCAAAACAACACATTT 58.345 33.333 0.00 0.00 42.37 2.32
3060 9083 6.102663 TCGAATGTCCAAAACAACACATTTT 58.897 32.000 0.00 0.00 42.37 1.82
3061 9084 6.591834 TCGAATGTCCAAAACAACACATTTTT 59.408 30.769 0.00 0.00 42.37 1.94
3062 9085 6.682020 CGAATGTCCAAAACAACACATTTTTG 59.318 34.615 0.00 0.00 42.37 2.44
3063 9086 5.288543 TGTCCAAAACAACACATTTTTGC 57.711 34.783 0.00 0.00 40.08 3.68
3064 9087 4.756642 TGTCCAAAACAACACATTTTTGCA 59.243 33.333 0.00 0.00 40.08 4.08
3065 9088 5.413833 TGTCCAAAACAACACATTTTTGCAT 59.586 32.000 0.00 0.00 40.08 3.96
3066 9089 5.738225 GTCCAAAACAACACATTTTTGCATG 59.262 36.000 0.00 0.00 40.08 4.06
3067 9090 4.499758 CCAAAACAACACATTTTTGCATGC 59.500 37.500 11.82 11.82 40.08 4.06
3068 9091 4.959596 AAACAACACATTTTTGCATGCA 57.040 31.818 18.46 18.46 0.00 3.96
3069 9092 3.948196 ACAACACATTTTTGCATGCAC 57.052 38.095 22.58 0.00 0.00 4.57
3070 9093 3.533547 ACAACACATTTTTGCATGCACT 58.466 36.364 22.58 2.34 0.00 4.40
3071 9094 3.940221 ACAACACATTTTTGCATGCACTT 59.060 34.783 22.58 2.14 0.00 3.16
3072 9095 4.395542 ACAACACATTTTTGCATGCACTTT 59.604 33.333 22.58 2.54 0.00 2.66
3073 9096 4.539509 ACACATTTTTGCATGCACTTTG 57.460 36.364 22.58 17.34 0.00 2.77
3074 9097 3.242804 ACACATTTTTGCATGCACTTTGC 60.243 39.130 22.58 3.77 45.29 3.68
3075 9098 3.002862 CACATTTTTGCATGCACTTTGCT 59.997 39.130 22.58 0.00 45.31 3.91
3076 9099 3.249080 ACATTTTTGCATGCACTTTGCTC 59.751 39.130 22.58 0.00 45.31 4.26
3077 9100 1.489574 TTTTGCATGCACTTTGCTCG 58.510 45.000 22.58 0.00 45.31 5.03
3078 9101 0.940519 TTTGCATGCACTTTGCTCGC 60.941 50.000 22.58 2.94 45.31 5.03
3079 9102 2.505557 GCATGCACTTTGCTCGCC 60.506 61.111 14.21 0.00 45.31 5.54
3080 9103 2.180017 CATGCACTTTGCTCGCCC 59.820 61.111 0.00 0.00 45.31 6.13
3081 9104 3.434319 ATGCACTTTGCTCGCCCG 61.434 61.111 0.00 0.00 45.31 6.13
3082 9105 3.899981 ATGCACTTTGCTCGCCCGA 62.900 57.895 0.00 0.00 45.31 5.14
3083 9106 3.793144 GCACTTTGCTCGCCCGAG 61.793 66.667 13.00 13.00 40.96 4.63
3091 9114 3.267860 CTCGCCCGAGCATCTTGC 61.268 66.667 4.63 0.00 45.46 4.01
3105 9128 5.338614 GCATCTTGCATGCCAAATATTTC 57.661 39.130 16.68 0.00 44.26 2.17
3106 9129 4.812091 GCATCTTGCATGCCAAATATTTCA 59.188 37.500 16.68 0.00 44.26 2.69
3107 9130 5.468746 GCATCTTGCATGCCAAATATTTCAT 59.531 36.000 16.68 0.00 44.26 2.57
3108 9131 6.647481 GCATCTTGCATGCCAAATATTTCATA 59.353 34.615 16.68 0.00 44.26 2.15
3109 9132 7.333423 GCATCTTGCATGCCAAATATTTCATAT 59.667 33.333 16.68 0.00 44.26 1.78
3110 9133 9.214957 CATCTTGCATGCCAAATATTTCATATT 57.785 29.630 16.68 0.00 37.05 1.28
3111 9134 9.787435 ATCTTGCATGCCAAATATTTCATATTT 57.213 25.926 16.68 0.00 44.07 1.40
3112 9135 9.616156 TCTTGCATGCCAAATATTTCATATTTT 57.384 25.926 16.68 0.00 42.02 1.82
3136 9159 7.815840 TTTCTGAATTTACAGTTCATGGACA 57.184 32.000 6.96 0.00 38.79 4.02
3137 9160 6.801539 TCTGAATTTACAGTTCATGGACAC 57.198 37.500 6.96 0.00 38.79 3.67
3138 9161 6.295249 TCTGAATTTACAGTTCATGGACACA 58.705 36.000 6.96 0.00 38.79 3.72
3139 9162 6.770303 TCTGAATTTACAGTTCATGGACACAA 59.230 34.615 6.96 0.00 38.79 3.33
3140 9163 6.969366 TGAATTTACAGTTCATGGACACAAG 58.031 36.000 6.96 0.00 31.07 3.16
3141 9164 6.545666 TGAATTTACAGTTCATGGACACAAGT 59.454 34.615 6.96 2.06 31.07 3.16
3142 9165 7.717436 TGAATTTACAGTTCATGGACACAAGTA 59.283 33.333 6.96 1.10 31.07 2.24
3143 9166 8.458573 AATTTACAGTTCATGGACACAAGTAA 57.541 30.769 6.96 7.08 0.00 2.24
3144 9167 8.635765 ATTTACAGTTCATGGACACAAGTAAT 57.364 30.769 6.96 0.00 0.00 1.89
3145 9168 5.947228 ACAGTTCATGGACACAAGTAATG 57.053 39.130 6.96 0.00 0.00 1.90
3146 9169 5.620206 ACAGTTCATGGACACAAGTAATGA 58.380 37.500 6.96 0.00 32.21 2.57
3147 9170 5.702670 ACAGTTCATGGACACAAGTAATGAG 59.297 40.000 6.96 0.00 34.35 2.90
3148 9171 4.697352 AGTTCATGGACACAAGTAATGAGC 59.303 41.667 6.96 0.00 34.35 4.26
3149 9172 3.609853 TCATGGACACAAGTAATGAGCC 58.390 45.455 0.00 0.00 31.14 4.70
3150 9173 2.489938 TGGACACAAGTAATGAGCCC 57.510 50.000 0.00 0.00 0.00 5.19
3151 9174 1.338674 TGGACACAAGTAATGAGCCCG 60.339 52.381 0.00 0.00 0.00 6.13
3152 9175 1.369625 GACACAAGTAATGAGCCCGG 58.630 55.000 0.00 0.00 0.00 5.73
3153 9176 0.035439 ACACAAGTAATGAGCCCGGG 60.035 55.000 19.09 19.09 0.00 5.73
3154 9177 1.077716 ACAAGTAATGAGCCCGGGC 60.078 57.895 39.29 39.29 42.33 6.13
3168 9191 2.190578 GGGCTCCGATTCACCCTG 59.809 66.667 0.00 0.00 39.42 4.45
3169 9192 2.670148 GGGCTCCGATTCACCCTGT 61.670 63.158 0.00 0.00 39.42 4.00
3170 9193 1.153349 GGCTCCGATTCACCCTGTC 60.153 63.158 0.00 0.00 0.00 3.51
3171 9194 1.153349 GCTCCGATTCACCCTGTCC 60.153 63.158 0.00 0.00 0.00 4.02
3172 9195 1.617947 GCTCCGATTCACCCTGTCCT 61.618 60.000 0.00 0.00 0.00 3.85
3173 9196 0.905357 CTCCGATTCACCCTGTCCTT 59.095 55.000 0.00 0.00 0.00 3.36
3174 9197 1.279271 CTCCGATTCACCCTGTCCTTT 59.721 52.381 0.00 0.00 0.00 3.11
3175 9198 1.702957 TCCGATTCACCCTGTCCTTTT 59.297 47.619 0.00 0.00 0.00 2.27
3176 9199 1.812571 CCGATTCACCCTGTCCTTTTG 59.187 52.381 0.00 0.00 0.00 2.44
3177 9200 1.812571 CGATTCACCCTGTCCTTTTGG 59.187 52.381 0.00 0.00 42.21 3.28
3178 9201 2.814097 CGATTCACCCTGTCCTTTTGGT 60.814 50.000 0.00 0.00 41.38 3.67
3180 9203 0.923358 TCACCCTGTCCTTTTGGTGT 59.077 50.000 7.34 0.00 46.59 4.16
3181 9204 1.286553 TCACCCTGTCCTTTTGGTGTT 59.713 47.619 7.34 0.00 46.59 3.32
3182 9205 2.107366 CACCCTGTCCTTTTGGTGTTT 58.893 47.619 0.00 0.00 42.61 2.83
3183 9206 2.499693 CACCCTGTCCTTTTGGTGTTTT 59.500 45.455 0.00 0.00 42.61 2.43
3184 9207 3.055458 CACCCTGTCCTTTTGGTGTTTTT 60.055 43.478 0.00 0.00 42.61 1.94
3205 9228 6.788684 TTTTTGTTTGCTATAGTACTCGCA 57.211 33.333 0.00 4.38 0.00 5.10
3206 9229 6.403333 TTTTGTTTGCTATAGTACTCGCAG 57.597 37.500 0.00 0.00 33.48 5.18
3207 9230 4.713824 TGTTTGCTATAGTACTCGCAGT 57.286 40.909 0.00 0.00 33.48 4.40
3208 9231 5.823209 TGTTTGCTATAGTACTCGCAGTA 57.177 39.130 0.00 0.00 33.48 2.74
3209 9232 5.817988 TGTTTGCTATAGTACTCGCAGTAG 58.182 41.667 0.00 0.00 30.12 2.57
3210 9233 5.213675 GTTTGCTATAGTACTCGCAGTAGG 58.786 45.833 0.00 0.00 30.12 3.18
3211 9234 2.812591 TGCTATAGTACTCGCAGTAGGC 59.187 50.000 0.00 0.00 39.90 3.93
3212 9235 3.075884 GCTATAGTACTCGCAGTAGGCT 58.924 50.000 0.00 0.00 41.67 4.58
3213 9236 4.252073 GCTATAGTACTCGCAGTAGGCTA 58.748 47.826 0.00 0.00 41.67 3.93
3214 9237 4.877251 GCTATAGTACTCGCAGTAGGCTAT 59.123 45.833 0.00 9.37 41.67 2.97
3215 9238 5.006941 GCTATAGTACTCGCAGTAGGCTATC 59.993 48.000 0.00 0.00 41.67 2.08
3216 9239 2.506444 AGTACTCGCAGTAGGCTATCC 58.494 52.381 0.00 0.00 41.67 2.59
3217 9240 1.540707 GTACTCGCAGTAGGCTATCCC 59.459 57.143 0.00 0.00 41.67 3.85
3218 9241 1.173444 ACTCGCAGTAGGCTATCCCG 61.173 60.000 0.00 0.95 41.67 5.14
3219 9242 1.152819 TCGCAGTAGGCTATCCCGT 60.153 57.895 0.00 0.00 41.67 5.28
3220 9243 0.109153 TCGCAGTAGGCTATCCCGTA 59.891 55.000 0.00 0.00 41.67 4.02
3221 9244 0.240411 CGCAGTAGGCTATCCCGTAC 59.760 60.000 0.00 0.00 41.67 3.67
3222 9245 1.618487 GCAGTAGGCTATCCCGTACT 58.382 55.000 0.00 0.00 40.25 2.73
3223 9246 2.787994 GCAGTAGGCTATCCCGTACTA 58.212 52.381 0.00 0.00 40.25 1.82
3224 9247 2.487372 GCAGTAGGCTATCCCGTACTAC 59.513 54.545 0.00 0.00 40.25 2.73
3225 9248 3.748083 CAGTAGGCTATCCCGTACTACA 58.252 50.000 0.00 0.00 37.17 2.74
3226 9249 3.501445 CAGTAGGCTATCCCGTACTACAC 59.499 52.174 0.00 0.00 37.17 2.90
3227 9250 2.742428 AGGCTATCCCGTACTACACA 57.258 50.000 0.00 0.00 39.21 3.72
3228 9251 2.305009 AGGCTATCCCGTACTACACAC 58.695 52.381 0.00 0.00 39.21 3.82
3229 9252 2.091994 AGGCTATCCCGTACTACACACT 60.092 50.000 0.00 0.00 39.21 3.55
3230 9253 2.292845 GGCTATCCCGTACTACACACTC 59.707 54.545 0.00 0.00 0.00 3.51
3231 9254 2.032204 GCTATCCCGTACTACACACTCG 60.032 54.545 0.00 0.00 0.00 4.18
3232 9255 0.737219 ATCCCGTACTACACACTCGC 59.263 55.000 0.00 0.00 0.00 5.03
3233 9256 1.138247 CCCGTACTACACACTCGCC 59.862 63.158 0.00 0.00 0.00 5.54
3234 9257 1.588824 CCCGTACTACACACTCGCCA 61.589 60.000 0.00 0.00 0.00 5.69
3235 9258 0.454600 CCGTACTACACACTCGCCAT 59.545 55.000 0.00 0.00 0.00 4.40
3236 9259 1.135199 CCGTACTACACACTCGCCATT 60.135 52.381 0.00 0.00 0.00 3.16
3237 9260 2.097954 CCGTACTACACACTCGCCATTA 59.902 50.000 0.00 0.00 0.00 1.90
3238 9261 3.103738 CGTACTACACACTCGCCATTAC 58.896 50.000 0.00 0.00 0.00 1.89
3239 9262 3.426560 CGTACTACACACTCGCCATTACA 60.427 47.826 0.00 0.00 0.00 2.41
3240 9263 3.671008 ACTACACACTCGCCATTACAA 57.329 42.857 0.00 0.00 0.00 2.41
3241 9264 3.323243 ACTACACACTCGCCATTACAAC 58.677 45.455 0.00 0.00 0.00 3.32
3242 9265 2.248280 ACACACTCGCCATTACAACA 57.752 45.000 0.00 0.00 0.00 3.33
3243 9266 2.778299 ACACACTCGCCATTACAACAT 58.222 42.857 0.00 0.00 0.00 2.71
3244 9267 3.932822 ACACACTCGCCATTACAACATA 58.067 40.909 0.00 0.00 0.00 2.29
3245 9268 3.682858 ACACACTCGCCATTACAACATAC 59.317 43.478 0.00 0.00 0.00 2.39
3246 9269 3.932710 CACACTCGCCATTACAACATACT 59.067 43.478 0.00 0.00 0.00 2.12
3247 9270 4.032900 CACACTCGCCATTACAACATACTC 59.967 45.833 0.00 0.00 0.00 2.59
3248 9271 4.081642 ACACTCGCCATTACAACATACTCT 60.082 41.667 0.00 0.00 0.00 3.24
3249 9272 5.126545 ACACTCGCCATTACAACATACTCTA 59.873 40.000 0.00 0.00 0.00 2.43
3250 9273 6.183360 ACACTCGCCATTACAACATACTCTAT 60.183 38.462 0.00 0.00 0.00 1.98
3251 9274 6.701841 CACTCGCCATTACAACATACTCTATT 59.298 38.462 0.00 0.00 0.00 1.73
3252 9275 7.865889 CACTCGCCATTACAACATACTCTATTA 59.134 37.037 0.00 0.00 0.00 0.98
3253 9276 8.082852 ACTCGCCATTACAACATACTCTATTAG 58.917 37.037 0.00 0.00 0.00 1.73
3254 9277 8.173542 TCGCCATTACAACATACTCTATTAGA 57.826 34.615 0.00 0.00 0.00 2.10
3255 9278 8.080417 TCGCCATTACAACATACTCTATTAGAC 58.920 37.037 0.00 0.00 0.00 2.59
3256 9279 7.060748 CGCCATTACAACATACTCTATTAGACG 59.939 40.741 0.00 0.00 0.00 4.18
3257 9280 8.080417 GCCATTACAACATACTCTATTAGACGA 58.920 37.037 0.00 0.00 0.00 4.20
3258 9281 9.613957 CCATTACAACATACTCTATTAGACGAG 57.386 37.037 0.00 0.00 0.00 4.18
3259 9282 9.613957 CATTACAACATACTCTATTAGACGAGG 57.386 37.037 0.00 0.00 0.00 4.63
3260 9283 8.743085 TTACAACATACTCTATTAGACGAGGT 57.257 34.615 0.00 0.00 0.00 3.85
3261 9284 9.836864 TTACAACATACTCTATTAGACGAGGTA 57.163 33.333 0.00 0.00 0.00 3.08
3262 9285 8.743085 ACAACATACTCTATTAGACGAGGTAA 57.257 34.615 0.00 0.00 0.00 2.85
3263 9286 8.619546 ACAACATACTCTATTAGACGAGGTAAC 58.380 37.037 0.00 0.00 0.00 2.50
3264 9287 7.418840 ACATACTCTATTAGACGAGGTAACG 57.581 40.000 0.00 0.00 46.39 3.18
3266 9289 5.731599 ACTCTATTAGACGAGGTAACGTG 57.268 43.478 0.00 0.00 46.52 4.49
3267 9290 5.181748 ACTCTATTAGACGAGGTAACGTGT 58.818 41.667 0.00 0.00 46.52 4.49
3268 9291 5.064452 ACTCTATTAGACGAGGTAACGTGTG 59.936 44.000 0.00 0.00 46.52 3.82
3269 9292 4.937620 TCTATTAGACGAGGTAACGTGTGT 59.062 41.667 0.00 0.00 46.52 3.72
3270 9293 3.988379 TTAGACGAGGTAACGTGTGTT 57.012 42.857 0.00 0.00 46.52 3.32
3271 9294 2.412421 AGACGAGGTAACGTGTGTTC 57.588 50.000 0.00 0.00 46.52 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
138 139 4.322567 AGCTCTTTTAGAAGCCTGTTCTG 58.677 43.478 0.00 0.00 32.75 3.02
575 6311 7.997107 AAGCTGATTTATCGACGTTTATACA 57.003 32.000 0.00 0.00 0.00 2.29
595 6331 7.462571 AGGGTTTGTCGAATTTTTATAAGCT 57.537 32.000 0.00 0.00 0.00 3.74
670 6420 0.616111 GGGAACTCCTGCTCCTCAGA 60.616 60.000 0.00 0.00 45.72 3.27
744 6509 2.985282 CGTGCCCACAACTGCCAT 60.985 61.111 0.00 0.00 0.00 4.40
858 6623 2.871633 CCACAAGCCCACAATTGTTTTC 59.128 45.455 8.77 0.46 37.54 2.29
884 6650 1.517694 CCATGCGCTGCAATTGTCC 60.518 57.895 9.73 0.00 43.62 4.02
1443 7316 2.342279 CCGGAGAAGCGGTTGACA 59.658 61.111 3.70 0.00 0.00 3.58
1711 7587 0.394565 AGGCTGAGCGACTTGAGTTT 59.605 50.000 0.00 0.00 0.00 2.66
1776 7652 0.322277 AGTAGCGAAGGTGGTCGAGA 60.322 55.000 0.00 0.00 43.86 4.04
1929 7810 3.859411 TTTGGTTGTTGTTGGAGTGTC 57.141 42.857 0.00 0.00 0.00 3.67
2367 8362 4.431416 TCCATGAGGTTACAAACTGTGT 57.569 40.909 0.00 0.00 39.18 3.72
2437 8435 8.434733 AAGTTTTGTAGAACTCTTAGGAACAC 57.565 34.615 0.00 0.00 38.86 3.32
2529 8549 2.498481 CCACACCTAGAAATCCACGGTA 59.502 50.000 0.00 0.00 0.00 4.02
2600 8620 0.166814 GCAAAAGTCTAGCACGGCTG 59.833 55.000 8.44 0.00 40.10 4.85
2605 8625 3.431572 CACTCTGAGCAAAAGTCTAGCAC 59.568 47.826 4.19 0.00 0.00 4.40
2606 8626 3.321968 TCACTCTGAGCAAAAGTCTAGCA 59.678 43.478 4.19 0.00 0.00 3.49
2607 8627 3.919216 TCACTCTGAGCAAAAGTCTAGC 58.081 45.455 4.19 0.00 0.00 3.42
2608 8628 5.163874 GCATTCACTCTGAGCAAAAGTCTAG 60.164 44.000 4.19 0.00 0.00 2.43
2609 8629 4.692625 GCATTCACTCTGAGCAAAAGTCTA 59.307 41.667 4.19 0.00 0.00 2.59
2610 8630 3.501445 GCATTCACTCTGAGCAAAAGTCT 59.499 43.478 4.19 0.00 0.00 3.24
2611 8631 3.251729 TGCATTCACTCTGAGCAAAAGTC 59.748 43.478 4.19 0.00 26.77 3.01
2612 8632 3.216800 TGCATTCACTCTGAGCAAAAGT 58.783 40.909 4.19 0.00 26.77 2.66
2613 8633 3.909776 TGCATTCACTCTGAGCAAAAG 57.090 42.857 4.19 0.00 26.77 2.27
2614 8634 4.038282 ACAATGCATTCACTCTGAGCAAAA 59.962 37.500 9.53 0.00 32.50 2.44
2615 8635 3.570975 ACAATGCATTCACTCTGAGCAAA 59.429 39.130 9.53 0.00 32.50 3.68
2616 8636 3.151554 ACAATGCATTCACTCTGAGCAA 58.848 40.909 9.53 0.00 32.50 3.91
2617 8637 2.745821 GACAATGCATTCACTCTGAGCA 59.254 45.455 9.53 0.00 33.13 4.26
2618 8638 3.008330 AGACAATGCATTCACTCTGAGC 58.992 45.455 9.53 0.00 0.00 4.26
2619 8639 5.417811 AGTAGACAATGCATTCACTCTGAG 58.582 41.667 9.53 2.45 0.00 3.35
2620 8640 5.411831 AGTAGACAATGCATTCACTCTGA 57.588 39.130 9.53 0.00 0.00 3.27
2621 8641 4.569966 GGAGTAGACAATGCATTCACTCTG 59.430 45.833 24.67 13.31 33.21 3.35
2622 8642 4.223700 TGGAGTAGACAATGCATTCACTCT 59.776 41.667 24.67 19.48 33.21 3.24
2623 8643 4.507710 TGGAGTAGACAATGCATTCACTC 58.492 43.478 21.06 21.06 0.00 3.51
2624 8644 4.558226 TGGAGTAGACAATGCATTCACT 57.442 40.909 9.53 13.63 0.00 3.41
2661 8684 6.367969 GGTATTCTACACGGGTTGCATAATAG 59.632 42.308 0.00 0.00 0.00 1.73
2673 8696 7.039923 AGGTGTATAGAATGGTATTCTACACGG 60.040 40.741 20.32 0.00 38.19 4.94
2674 8697 7.883217 AGGTGTATAGAATGGTATTCTACACG 58.117 38.462 20.32 0.00 38.19 4.49
2713 8736 2.550830 ACTGAACACCTGTTAGCCTG 57.449 50.000 0.00 0.00 38.56 4.85
2714 8737 2.548067 CGAACTGAACACCTGTTAGCCT 60.548 50.000 0.00 0.00 38.56 4.58
2715 8738 1.798813 CGAACTGAACACCTGTTAGCC 59.201 52.381 0.00 0.00 38.56 3.93
2716 8739 1.798813 CCGAACTGAACACCTGTTAGC 59.201 52.381 0.00 0.00 38.56 3.09
2717 8740 3.057734 GACCGAACTGAACACCTGTTAG 58.942 50.000 0.00 0.00 38.56 2.34
2718 8741 2.696707 AGACCGAACTGAACACCTGTTA 59.303 45.455 0.00 0.00 38.56 2.41
2719 8742 1.485066 AGACCGAACTGAACACCTGTT 59.515 47.619 0.00 0.00 41.64 3.16
2720 8743 1.068741 GAGACCGAACTGAACACCTGT 59.931 52.381 0.00 0.00 0.00 4.00
2721 8744 1.341531 AGAGACCGAACTGAACACCTG 59.658 52.381 0.00 0.00 0.00 4.00
2722 8745 1.341531 CAGAGACCGAACTGAACACCT 59.658 52.381 0.00 0.00 36.38 4.00
2723 8746 1.340248 TCAGAGACCGAACTGAACACC 59.660 52.381 0.00 0.00 39.68 4.16
2724 8747 2.223735 TGTCAGAGACCGAACTGAACAC 60.224 50.000 0.00 0.00 43.29 3.32
2725 8748 2.028876 TGTCAGAGACCGAACTGAACA 58.971 47.619 0.00 0.00 43.29 3.18
2726 8749 2.395654 GTGTCAGAGACCGAACTGAAC 58.604 52.381 0.00 0.00 43.29 3.18
2727 8750 1.001706 CGTGTCAGAGACCGAACTGAA 60.002 52.381 0.00 0.00 43.29 3.02
2728 8751 0.591659 CGTGTCAGAGACCGAACTGA 59.408 55.000 0.00 0.00 40.22 3.41
2729 8752 0.387367 CCGTGTCAGAGACCGAACTG 60.387 60.000 8.78 0.00 31.51 3.16
2730 8753 0.536687 TCCGTGTCAGAGACCGAACT 60.537 55.000 8.78 0.00 31.51 3.01
2731 8754 0.109689 CTCCGTGTCAGAGACCGAAC 60.110 60.000 8.78 0.00 32.86 3.95
2732 8755 1.241990 CCTCCGTGTCAGAGACCGAA 61.242 60.000 8.78 0.00 32.86 4.30
2733 8756 1.674651 CCTCCGTGTCAGAGACCGA 60.675 63.158 8.78 0.00 32.86 4.69
2734 8757 2.878429 CCTCCGTGTCAGAGACCG 59.122 66.667 0.00 0.00 32.86 4.79
2735 8758 1.816863 TTGCCTCCGTGTCAGAGACC 61.817 60.000 0.00 0.00 32.86 3.85
2736 8759 0.667792 GTTGCCTCCGTGTCAGAGAC 60.668 60.000 0.00 0.00 32.86 3.36
2737 8760 1.666011 GTTGCCTCCGTGTCAGAGA 59.334 57.895 0.00 0.00 32.86 3.10
2738 8761 1.734477 CGTTGCCTCCGTGTCAGAG 60.734 63.158 0.00 0.00 0.00 3.35
2739 8762 1.740332 TTCGTTGCCTCCGTGTCAGA 61.740 55.000 0.00 0.00 0.00 3.27
2740 8763 1.284982 CTTCGTTGCCTCCGTGTCAG 61.285 60.000 0.00 0.00 0.00 3.51
2741 8764 1.300620 CTTCGTTGCCTCCGTGTCA 60.301 57.895 0.00 0.00 0.00 3.58
2742 8765 2.668280 GCTTCGTTGCCTCCGTGTC 61.668 63.158 0.00 0.00 0.00 3.67
2743 8766 2.665185 GCTTCGTTGCCTCCGTGT 60.665 61.111 0.00 0.00 0.00 4.49
2744 8767 2.357517 AGCTTCGTTGCCTCCGTG 60.358 61.111 0.00 0.00 0.00 4.94
2745 8768 2.357517 CAGCTTCGTTGCCTCCGT 60.358 61.111 0.00 0.00 0.00 4.69
2746 8769 3.121030 CCAGCTTCGTTGCCTCCG 61.121 66.667 0.00 0.00 0.00 4.63
2747 8770 3.435186 GCCAGCTTCGTTGCCTCC 61.435 66.667 0.00 0.00 0.00 4.30
2748 8771 2.359230 AGCCAGCTTCGTTGCCTC 60.359 61.111 0.00 0.00 0.00 4.70
2749 8772 2.670934 CAGCCAGCTTCGTTGCCT 60.671 61.111 0.00 0.00 0.00 4.75
2750 8773 4.410743 GCAGCCAGCTTCGTTGCC 62.411 66.667 7.87 0.00 41.15 4.52
2751 8774 2.986306 ATGCAGCCAGCTTCGTTGC 61.986 57.895 11.27 11.27 45.94 4.17
2752 8775 1.154093 CATGCAGCCAGCTTCGTTG 60.154 57.895 0.00 0.00 45.94 4.10
2753 8776 2.986306 GCATGCAGCCAGCTTCGTT 61.986 57.895 14.21 0.00 45.94 3.85
2754 8777 3.437795 GCATGCAGCCAGCTTCGT 61.438 61.111 14.21 0.00 45.94 3.85
2763 8786 1.153823 CAGAAGCTTGGCATGCAGC 60.154 57.895 24.85 20.33 44.65 5.25
2764 8787 0.170561 GTCAGAAGCTTGGCATGCAG 59.829 55.000 24.85 10.51 0.00 4.41
2765 8788 1.579964 CGTCAGAAGCTTGGCATGCA 61.580 55.000 24.85 2.54 0.00 3.96
2766 8789 1.136147 CGTCAGAAGCTTGGCATGC 59.864 57.895 16.84 16.84 0.00 4.06
2767 8790 1.136147 GCGTCAGAAGCTTGGCATG 59.864 57.895 2.10 0.00 0.00 4.06
2768 8791 1.002868 AGCGTCAGAAGCTTGGCAT 60.003 52.632 2.10 0.00 43.24 4.40
2769 8792 1.962822 CAGCGTCAGAAGCTTGGCA 60.963 57.895 8.30 0.00 44.06 4.92
2770 8793 0.670546 TACAGCGTCAGAAGCTTGGC 60.671 55.000 8.30 0.00 44.06 4.52
2771 8794 1.071605 GTACAGCGTCAGAAGCTTGG 58.928 55.000 8.30 1.15 44.06 3.61
2772 8795 1.723542 CAGTACAGCGTCAGAAGCTTG 59.276 52.381 8.30 7.11 44.06 4.01
2773 8796 1.341531 ACAGTACAGCGTCAGAAGCTT 59.658 47.619 8.30 0.00 44.06 3.74
2775 8798 2.631418 TACAGTACAGCGTCAGAAGC 57.369 50.000 0.00 0.00 0.00 3.86
2776 8799 5.881447 AGTATTACAGTACAGCGTCAGAAG 58.119 41.667 0.00 0.00 0.00 2.85
2777 8800 5.413523 TGAGTATTACAGTACAGCGTCAGAA 59.586 40.000 0.00 0.00 0.00 3.02
2778 8801 4.939439 TGAGTATTACAGTACAGCGTCAGA 59.061 41.667 0.00 0.00 0.00 3.27
2779 8802 5.231265 TGAGTATTACAGTACAGCGTCAG 57.769 43.478 0.00 0.00 0.00 3.51
2780 8803 5.182570 AGTTGAGTATTACAGTACAGCGTCA 59.817 40.000 0.00 0.00 0.00 4.35
2781 8804 5.638783 AGTTGAGTATTACAGTACAGCGTC 58.361 41.667 0.00 0.00 0.00 5.19
2782 8805 5.640189 AGTTGAGTATTACAGTACAGCGT 57.360 39.130 0.00 0.00 0.00 5.07
2783 8806 6.783162 AGTAGTTGAGTATTACAGTACAGCG 58.217 40.000 0.00 0.00 0.00 5.18
2789 8812 9.298774 GCGAAATAAGTAGTTGAGTATTACAGT 57.701 33.333 0.00 0.00 0.00 3.55
2790 8813 8.469902 CGCGAAATAAGTAGTTGAGTATTACAG 58.530 37.037 0.00 0.00 0.00 2.74
2791 8814 7.433131 CCGCGAAATAAGTAGTTGAGTATTACA 59.567 37.037 8.23 0.00 0.00 2.41
2792 8815 7.566508 GCCGCGAAATAAGTAGTTGAGTATTAC 60.567 40.741 8.23 0.00 0.00 1.89
2793 8816 6.418819 GCCGCGAAATAAGTAGTTGAGTATTA 59.581 38.462 8.23 0.00 0.00 0.98
2794 8817 5.233689 GCCGCGAAATAAGTAGTTGAGTATT 59.766 40.000 8.23 0.00 0.00 1.89
2795 8818 4.743644 GCCGCGAAATAAGTAGTTGAGTAT 59.256 41.667 8.23 0.00 0.00 2.12
2796 8819 4.107622 GCCGCGAAATAAGTAGTTGAGTA 58.892 43.478 8.23 0.00 0.00 2.59
2797 8820 2.928116 GCCGCGAAATAAGTAGTTGAGT 59.072 45.455 8.23 0.00 0.00 3.41
2798 8821 2.927477 TGCCGCGAAATAAGTAGTTGAG 59.073 45.455 8.23 0.00 0.00 3.02
2799 8822 2.962125 TGCCGCGAAATAAGTAGTTGA 58.038 42.857 8.23 0.00 0.00 3.18
2800 8823 3.733024 TTGCCGCGAAATAAGTAGTTG 57.267 42.857 8.23 0.00 0.00 3.16
2801 8824 4.658071 CAATTGCCGCGAAATAAGTAGTT 58.342 39.130 8.23 0.00 0.00 2.24
2802 8825 3.486875 GCAATTGCCGCGAAATAAGTAGT 60.487 43.478 20.06 0.00 34.31 2.73
2803 8826 3.035942 GCAATTGCCGCGAAATAAGTAG 58.964 45.455 20.06 0.00 34.31 2.57
2804 8827 2.680841 AGCAATTGCCGCGAAATAAGTA 59.319 40.909 26.45 0.00 43.38 2.24
2805 8828 1.472480 AGCAATTGCCGCGAAATAAGT 59.528 42.857 26.45 0.38 43.38 2.24
2806 8829 2.193306 AGCAATTGCCGCGAAATAAG 57.807 45.000 26.45 5.21 43.38 1.73
2807 8830 3.563808 AGATAGCAATTGCCGCGAAATAA 59.436 39.130 26.45 0.00 43.38 1.40
2808 8831 3.138304 AGATAGCAATTGCCGCGAAATA 58.862 40.909 26.45 11.00 43.38 1.40
2809 8832 1.949525 AGATAGCAATTGCCGCGAAAT 59.050 42.857 26.45 9.01 43.38 2.17
2810 8833 1.378531 AGATAGCAATTGCCGCGAAA 58.621 45.000 26.45 1.21 43.38 3.46
2811 8834 1.063912 CAAGATAGCAATTGCCGCGAA 59.936 47.619 26.45 8.04 43.38 4.70
2812 8835 0.657312 CAAGATAGCAATTGCCGCGA 59.343 50.000 26.45 10.37 43.38 5.87
2813 8836 0.378257 ACAAGATAGCAATTGCCGCG 59.622 50.000 26.45 11.80 43.38 6.46
2814 8837 1.268743 GGACAAGATAGCAATTGCCGC 60.269 52.381 26.45 15.65 43.38 6.53
2815 8838 2.016318 TGGACAAGATAGCAATTGCCG 58.984 47.619 26.45 10.78 43.38 5.69
2816 8839 2.360165 CCTGGACAAGATAGCAATTGCC 59.640 50.000 26.45 11.77 43.38 4.52
2817 8840 2.223665 GCCTGGACAAGATAGCAATTGC 60.224 50.000 23.05 23.05 42.49 3.56
2818 8841 3.285484 AGCCTGGACAAGATAGCAATTG 58.715 45.455 0.00 0.00 0.00 2.32
2819 8842 3.054139 TGAGCCTGGACAAGATAGCAATT 60.054 43.478 0.00 0.00 0.00 2.32
2820 8843 2.507058 TGAGCCTGGACAAGATAGCAAT 59.493 45.455 0.00 0.00 0.00 3.56
2821 8844 1.908619 TGAGCCTGGACAAGATAGCAA 59.091 47.619 0.00 0.00 0.00 3.91
2822 8845 1.571955 TGAGCCTGGACAAGATAGCA 58.428 50.000 0.00 0.00 0.00 3.49
2823 8846 2.368221 AGATGAGCCTGGACAAGATAGC 59.632 50.000 0.00 0.00 0.00 2.97
2824 8847 3.305267 CGAGATGAGCCTGGACAAGATAG 60.305 52.174 0.00 0.00 0.00 2.08
2825 8848 2.625314 CGAGATGAGCCTGGACAAGATA 59.375 50.000 0.00 0.00 0.00 1.98
2826 8849 1.411977 CGAGATGAGCCTGGACAAGAT 59.588 52.381 0.00 0.00 0.00 2.40
2827 8850 0.820226 CGAGATGAGCCTGGACAAGA 59.180 55.000 0.00 0.00 0.00 3.02
2828 8851 0.534412 ACGAGATGAGCCTGGACAAG 59.466 55.000 0.00 0.00 0.00 3.16
2829 8852 0.532573 GACGAGATGAGCCTGGACAA 59.467 55.000 0.00 0.00 0.00 3.18
2830 8853 1.323271 GGACGAGATGAGCCTGGACA 61.323 60.000 0.00 0.00 0.00 4.02
2831 8854 1.040339 AGGACGAGATGAGCCTGGAC 61.040 60.000 0.00 0.00 0.00 4.02
2832 8855 1.039785 CAGGACGAGATGAGCCTGGA 61.040 60.000 0.00 0.00 43.22 3.86
2833 8856 1.039785 TCAGGACGAGATGAGCCTGG 61.040 60.000 0.00 0.00 46.14 4.45
2834 8857 3.592877 TCATCAGGACGAGATGAGCCTG 61.593 54.545 0.00 0.00 44.98 4.85
2835 8858 1.039068 CATCAGGACGAGATGAGCCT 58.961 55.000 0.00 0.00 44.34 4.58
2836 8859 1.035923 TCATCAGGACGAGATGAGCC 58.964 55.000 2.00 0.00 44.98 4.70
2840 8863 8.824159 AATTTACTATTCATCAGGACGAGATG 57.176 34.615 0.00 0.00 43.25 2.90
2841 8864 9.838339 AAAATTTACTATTCATCAGGACGAGAT 57.162 29.630 0.00 0.00 0.00 2.75
2842 8865 9.098355 CAAAATTTACTATTCATCAGGACGAGA 57.902 33.333 0.00 0.00 0.00 4.04
2843 8866 9.098355 TCAAAATTTACTATTCATCAGGACGAG 57.902 33.333 0.00 0.00 0.00 4.18
2844 8867 8.879759 GTCAAAATTTACTATTCATCAGGACGA 58.120 33.333 0.00 0.00 0.00 4.20
2845 8868 8.664798 TGTCAAAATTTACTATTCATCAGGACG 58.335 33.333 0.00 0.00 0.00 4.79
2907 8930 2.825861 AAATTTGCAGTGCTCCCAAG 57.174 45.000 17.60 0.00 0.00 3.61
2908 8931 3.204526 CAAAAATTTGCAGTGCTCCCAA 58.795 40.909 17.60 4.45 0.00 4.12
2909 8932 2.170187 ACAAAAATTTGCAGTGCTCCCA 59.830 40.909 17.60 0.00 41.79 4.37
2910 8933 2.837498 ACAAAAATTTGCAGTGCTCCC 58.163 42.857 17.60 0.00 41.79 4.30
2911 8934 4.025480 CAGAACAAAAATTTGCAGTGCTCC 60.025 41.667 17.60 0.00 41.79 4.70
2912 8935 4.567959 ACAGAACAAAAATTTGCAGTGCTC 59.432 37.500 17.60 0.92 41.79 4.26
2913 8936 4.506758 ACAGAACAAAAATTTGCAGTGCT 58.493 34.783 17.60 0.00 41.79 4.40
2914 8937 4.863152 ACAGAACAAAAATTTGCAGTGC 57.137 36.364 8.58 8.58 41.79 4.40
2915 8938 6.022821 CCAAACAGAACAAAAATTTGCAGTG 58.977 36.000 5.82 3.75 41.79 3.66
2916 8939 5.936956 TCCAAACAGAACAAAAATTTGCAGT 59.063 32.000 5.82 0.00 41.79 4.40
2917 8940 6.128336 TGTCCAAACAGAACAAAAATTTGCAG 60.128 34.615 5.82 0.00 41.79 4.41
2918 8941 5.702670 TGTCCAAACAGAACAAAAATTTGCA 59.297 32.000 5.82 0.00 41.79 4.08
2919 8942 6.175712 TGTCCAAACAGAACAAAAATTTGC 57.824 33.333 5.82 0.00 41.79 3.68
2920 8943 7.635587 CGAATGTCCAAACAGAACAAAAATTTG 59.364 33.333 4.40 4.40 40.37 2.32
2921 8944 7.547370 TCGAATGTCCAAACAGAACAAAAATTT 59.453 29.630 0.00 0.00 39.20 1.82
2922 8945 7.038659 TCGAATGTCCAAACAGAACAAAAATT 58.961 30.769 0.00 0.00 39.20 1.82
2923 8946 6.568869 TCGAATGTCCAAACAGAACAAAAAT 58.431 32.000 0.00 0.00 39.20 1.82
2924 8947 5.955488 TCGAATGTCCAAACAGAACAAAAA 58.045 33.333 0.00 0.00 39.20 1.94
2925 8948 5.568685 TCGAATGTCCAAACAGAACAAAA 57.431 34.783 0.00 0.00 39.20 2.44
2926 8949 5.298026 TCATCGAATGTCCAAACAGAACAAA 59.702 36.000 0.00 0.00 39.20 2.83
2927 8950 4.819088 TCATCGAATGTCCAAACAGAACAA 59.181 37.500 0.00 0.00 39.20 2.83
2928 8951 4.384940 TCATCGAATGTCCAAACAGAACA 58.615 39.130 0.00 0.00 39.20 3.18
2929 8952 4.142816 CCTCATCGAATGTCCAAACAGAAC 60.143 45.833 0.00 0.00 39.20 3.01
2930 8953 4.002982 CCTCATCGAATGTCCAAACAGAA 58.997 43.478 0.00 0.00 39.20 3.02
2931 8954 3.007940 ACCTCATCGAATGTCCAAACAGA 59.992 43.478 0.00 0.00 39.20 3.41
2932 8955 3.338249 ACCTCATCGAATGTCCAAACAG 58.662 45.455 0.00 0.00 39.20 3.16
2933 8956 3.417069 ACCTCATCGAATGTCCAAACA 57.583 42.857 0.00 0.00 40.38 2.83
2934 8957 3.670627 GCAACCTCATCGAATGTCCAAAC 60.671 47.826 0.00 0.00 0.00 2.93
2935 8958 2.487762 GCAACCTCATCGAATGTCCAAA 59.512 45.455 0.00 0.00 0.00 3.28
2936 8959 2.083774 GCAACCTCATCGAATGTCCAA 58.916 47.619 0.00 0.00 0.00 3.53
2937 8960 1.737838 GCAACCTCATCGAATGTCCA 58.262 50.000 0.00 0.00 0.00 4.02
2938 8961 0.652592 CGCAACCTCATCGAATGTCC 59.347 55.000 0.00 0.00 0.00 4.02
2939 8962 0.652592 CCGCAACCTCATCGAATGTC 59.347 55.000 0.00 0.00 0.00 3.06
2940 8963 0.744414 CCCGCAACCTCATCGAATGT 60.744 55.000 0.00 0.00 0.00 2.71
2941 8964 0.461870 TCCCGCAACCTCATCGAATG 60.462 55.000 0.00 0.00 0.00 2.67
2942 8965 0.251916 TTCCCGCAACCTCATCGAAT 59.748 50.000 0.00 0.00 0.00 3.34
2943 8966 0.035598 TTTCCCGCAACCTCATCGAA 59.964 50.000 0.00 0.00 0.00 3.71
2944 8967 0.035598 TTTTCCCGCAACCTCATCGA 59.964 50.000 0.00 0.00 0.00 3.59
2945 8968 0.878416 TTTTTCCCGCAACCTCATCG 59.122 50.000 0.00 0.00 0.00 3.84
2946 8969 4.712122 TTATTTTTCCCGCAACCTCATC 57.288 40.909 0.00 0.00 0.00 2.92
2947 8970 5.476091 TTTTATTTTTCCCGCAACCTCAT 57.524 34.783 0.00 0.00 0.00 2.90
2948 8971 4.939052 TTTTATTTTTCCCGCAACCTCA 57.061 36.364 0.00 0.00 0.00 3.86
2949 8972 5.474825 TGATTTTATTTTTCCCGCAACCTC 58.525 37.500 0.00 0.00 0.00 3.85
2950 8973 5.476091 TGATTTTATTTTTCCCGCAACCT 57.524 34.783 0.00 0.00 0.00 3.50
2951 8974 5.641636 ACATGATTTTATTTTTCCCGCAACC 59.358 36.000 0.00 0.00 0.00 3.77
2952 8975 6.589907 AGACATGATTTTATTTTTCCCGCAAC 59.410 34.615 0.00 0.00 0.00 4.17
2953 8976 6.696411 AGACATGATTTTATTTTTCCCGCAA 58.304 32.000 0.00 0.00 0.00 4.85
2954 8977 6.279513 AGACATGATTTTATTTTTCCCGCA 57.720 33.333 0.00 0.00 0.00 5.69
2955 8978 8.871686 ATTAGACATGATTTTATTTTTCCCGC 57.128 30.769 0.00 0.00 0.00 6.13
2980 9003 9.950680 CTCAAAGAAACTTTAAAGAATGCACTA 57.049 29.630 21.92 1.34 0.00 2.74
2981 9004 8.686334 TCTCAAAGAAACTTTAAAGAATGCACT 58.314 29.630 21.92 8.70 0.00 4.40
2982 9005 8.856490 TCTCAAAGAAACTTTAAAGAATGCAC 57.144 30.769 21.92 6.80 0.00 4.57
2983 9006 7.649306 GCTCTCAAAGAAACTTTAAAGAATGCA 59.351 33.333 21.92 0.00 0.00 3.96
2984 9007 7.115520 GGCTCTCAAAGAAACTTTAAAGAATGC 59.884 37.037 21.92 8.67 0.00 3.56
2985 9008 8.137437 TGGCTCTCAAAGAAACTTTAAAGAATG 58.863 33.333 21.92 10.22 0.00 2.67
2986 9009 8.237811 TGGCTCTCAAAGAAACTTTAAAGAAT 57.762 30.769 21.92 9.46 0.00 2.40
2987 9010 7.639113 TGGCTCTCAAAGAAACTTTAAAGAA 57.361 32.000 21.92 0.00 0.00 2.52
2988 9011 7.639113 TTGGCTCTCAAAGAAACTTTAAAGA 57.361 32.000 21.92 0.00 31.46 2.52
2989 9012 8.877808 AATTGGCTCTCAAAGAAACTTTAAAG 57.122 30.769 13.76 13.76 39.05 1.85
2990 9013 9.665719 AAAATTGGCTCTCAAAGAAACTTTAAA 57.334 25.926 0.00 0.00 39.05 1.52
2991 9014 9.665719 AAAAATTGGCTCTCAAAGAAACTTTAA 57.334 25.926 0.00 0.00 39.05 1.52
3017 9040 1.673920 GAGAAGGTCGTGGCACAAAAA 59.326 47.619 19.09 0.00 44.16 1.94
3018 9041 1.305201 GAGAAGGTCGTGGCACAAAA 58.695 50.000 19.09 0.00 44.16 2.44
3019 9042 0.878523 CGAGAAGGTCGTGGCACAAA 60.879 55.000 19.09 1.54 44.16 2.83
3020 9043 1.300620 CGAGAAGGTCGTGGCACAA 60.301 57.895 19.09 0.00 44.16 3.33
3021 9044 2.338620 CGAGAAGGTCGTGGCACA 59.661 61.111 19.09 1.83 44.20 4.57
3030 9053 3.815809 TGTTTTGGACATTCGAGAAGGT 58.184 40.909 2.62 2.62 38.10 3.50
3031 9054 4.036262 TGTTGTTTTGGACATTCGAGAAGG 59.964 41.667 0.00 0.00 38.26 3.46
3032 9055 4.970003 GTGTTGTTTTGGACATTCGAGAAG 59.030 41.667 0.00 0.00 38.26 2.85
3033 9056 4.396478 TGTGTTGTTTTGGACATTCGAGAA 59.604 37.500 0.00 0.00 38.26 2.87
3034 9057 3.942115 TGTGTTGTTTTGGACATTCGAGA 59.058 39.130 0.00 0.00 38.26 4.04
3035 9058 4.285807 TGTGTTGTTTTGGACATTCGAG 57.714 40.909 0.00 0.00 38.26 4.04
3036 9059 4.909696 ATGTGTTGTTTTGGACATTCGA 57.090 36.364 0.00 0.00 38.26 3.71
3037 9060 5.964887 AAATGTGTTGTTTTGGACATTCG 57.035 34.783 0.00 0.00 37.92 3.34
3038 9061 6.468637 GCAAAAATGTGTTGTTTTGGACATTC 59.531 34.615 10.02 0.00 42.41 2.67
3039 9062 6.072286 TGCAAAAATGTGTTGTTTTGGACATT 60.072 30.769 10.02 0.00 42.41 2.71
3040 9063 5.413833 TGCAAAAATGTGTTGTTTTGGACAT 59.586 32.000 10.02 0.00 42.41 3.06
3041 9064 4.756642 TGCAAAAATGTGTTGTTTTGGACA 59.243 33.333 10.02 0.00 42.41 4.02
3042 9065 5.288543 TGCAAAAATGTGTTGTTTTGGAC 57.711 34.783 10.02 0.00 42.41 4.02
3043 9066 5.675575 GCATGCAAAAATGTGTTGTTTTGGA 60.676 36.000 14.21 7.95 45.23 3.53
3044 9067 4.499758 GCATGCAAAAATGTGTTGTTTTGG 59.500 37.500 14.21 0.00 42.41 3.28
3045 9068 5.003590 GTGCATGCAAAAATGTGTTGTTTTG 59.996 36.000 24.58 4.84 44.11 2.44
3046 9069 5.094134 GTGCATGCAAAAATGTGTTGTTTT 58.906 33.333 24.58 0.00 0.00 2.43
3047 9070 4.395542 AGTGCATGCAAAAATGTGTTGTTT 59.604 33.333 24.58 0.00 0.00 2.83
3048 9071 3.940221 AGTGCATGCAAAAATGTGTTGTT 59.060 34.783 24.58 0.00 0.00 2.83
3049 9072 3.533547 AGTGCATGCAAAAATGTGTTGT 58.466 36.364 24.58 0.00 0.00 3.32
3050 9073 4.539509 AAGTGCATGCAAAAATGTGTTG 57.460 36.364 24.58 0.00 0.00 3.33
3051 9074 4.731193 GCAAAGTGCATGCAAAAATGTGTT 60.731 37.500 24.58 4.89 44.26 3.32
3052 9075 3.242804 GCAAAGTGCATGCAAAAATGTGT 60.243 39.130 24.58 0.00 44.26 3.72
3053 9076 3.293262 GCAAAGTGCATGCAAAAATGTG 58.707 40.909 24.58 14.67 44.26 3.21
3054 9077 3.612472 GCAAAGTGCATGCAAAAATGT 57.388 38.095 24.58 0.72 44.26 2.71
3066 9089 3.793144 CTCGGGCGAGCAAAGTGC 61.793 66.667 0.00 0.00 45.46 4.40
3074 9097 3.267860 GCAAGATGCTCGGGCGAG 61.268 66.667 1.14 0.00 40.96 5.03
3075 9098 3.390183 ATGCAAGATGCTCGGGCGA 62.390 57.895 1.14 0.00 45.31 5.54
3076 9099 2.898840 ATGCAAGATGCTCGGGCG 60.899 61.111 1.14 0.00 45.31 6.13
3077 9100 2.719979 CATGCAAGATGCTCGGGC 59.280 61.111 0.00 0.00 45.31 6.13
3078 9101 2.719979 GCATGCAAGATGCTCGGG 59.280 61.111 14.21 0.00 45.31 5.14
3079 9102 1.659622 TTGGCATGCAAGATGCTCGG 61.660 55.000 21.36 0.00 45.31 4.63
3080 9103 0.171679 TTTGGCATGCAAGATGCTCG 59.828 50.000 21.36 0.00 45.31 5.03
3081 9104 2.596904 ATTTGGCATGCAAGATGCTC 57.403 45.000 21.36 0.00 45.31 4.26
3082 9105 4.682778 AATATTTGGCATGCAAGATGCT 57.317 36.364 21.36 0.00 45.31 3.79
3083 9106 4.812091 TGAAATATTTGGCATGCAAGATGC 59.188 37.500 21.36 2.03 45.29 3.91
3084 9107 8.771920 ATATGAAATATTTGGCATGCAAGATG 57.228 30.769 21.36 0.00 35.58 2.90
3110 9133 8.690884 TGTCCATGAACTGTAAATTCAGAAAAA 58.309 29.630 0.00 0.00 39.36 1.94
3111 9134 8.134895 GTGTCCATGAACTGTAAATTCAGAAAA 58.865 33.333 0.00 0.00 39.36 2.29
3112 9135 7.284261 TGTGTCCATGAACTGTAAATTCAGAAA 59.716 33.333 0.00 0.00 39.36 2.52
3113 9136 6.770303 TGTGTCCATGAACTGTAAATTCAGAA 59.230 34.615 0.00 0.00 39.36 3.02
3114 9137 6.295249 TGTGTCCATGAACTGTAAATTCAGA 58.705 36.000 0.00 0.00 39.36 3.27
3115 9138 6.558771 TGTGTCCATGAACTGTAAATTCAG 57.441 37.500 0.00 0.00 39.36 3.02
3116 9139 6.545666 ACTTGTGTCCATGAACTGTAAATTCA 59.454 34.615 0.00 0.00 40.25 2.57
3117 9140 6.970484 ACTTGTGTCCATGAACTGTAAATTC 58.030 36.000 0.00 0.00 0.00 2.17
3118 9141 6.959639 ACTTGTGTCCATGAACTGTAAATT 57.040 33.333 0.00 0.00 0.00 1.82
3119 9142 8.514594 CATTACTTGTGTCCATGAACTGTAAAT 58.485 33.333 0.00 0.00 0.00 1.40
3120 9143 7.717436 TCATTACTTGTGTCCATGAACTGTAAA 59.283 33.333 0.00 0.00 0.00 2.01
3121 9144 7.220740 TCATTACTTGTGTCCATGAACTGTAA 58.779 34.615 0.00 4.96 0.00 2.41
3122 9145 6.764379 TCATTACTTGTGTCCATGAACTGTA 58.236 36.000 0.00 0.00 0.00 2.74
3123 9146 5.620206 TCATTACTTGTGTCCATGAACTGT 58.380 37.500 0.00 0.00 0.00 3.55
3124 9147 5.391310 GCTCATTACTTGTGTCCATGAACTG 60.391 44.000 0.00 0.00 30.36 3.16
3125 9148 4.697352 GCTCATTACTTGTGTCCATGAACT 59.303 41.667 0.00 0.00 30.36 3.01
3126 9149 4.142600 GGCTCATTACTTGTGTCCATGAAC 60.143 45.833 0.00 0.00 30.36 3.18
3127 9150 4.009675 GGCTCATTACTTGTGTCCATGAA 58.990 43.478 0.00 0.00 30.36 2.57
3128 9151 3.609853 GGCTCATTACTTGTGTCCATGA 58.390 45.455 0.00 0.00 0.00 3.07
3129 9152 2.684881 GGGCTCATTACTTGTGTCCATG 59.315 50.000 0.00 0.00 42.08 3.66
3130 9153 2.680805 CGGGCTCATTACTTGTGTCCAT 60.681 50.000 0.07 0.00 42.52 3.41
3131 9154 1.338674 CGGGCTCATTACTTGTGTCCA 60.339 52.381 0.07 0.00 42.52 4.02
3132 9155 1.369625 CGGGCTCATTACTTGTGTCC 58.630 55.000 0.00 0.00 39.67 4.02
3133 9156 1.369625 CCGGGCTCATTACTTGTGTC 58.630 55.000 0.00 0.00 0.00 3.67
3134 9157 0.035439 CCCGGGCTCATTACTTGTGT 60.035 55.000 8.08 0.00 0.00 3.72
3135 9158 1.376609 GCCCGGGCTCATTACTTGTG 61.377 60.000 38.76 0.00 38.26 3.33
3136 9159 1.077716 GCCCGGGCTCATTACTTGT 60.078 57.895 38.76 0.00 38.26 3.16
3137 9160 3.827634 GCCCGGGCTCATTACTTG 58.172 61.111 38.76 0.00 38.26 3.16
3151 9174 2.190578 CAGGGTGAATCGGAGCCC 59.809 66.667 0.00 0.00 41.36 5.19
3152 9175 1.153349 GACAGGGTGAATCGGAGCC 60.153 63.158 0.00 0.00 0.00 4.70
3153 9176 1.153349 GGACAGGGTGAATCGGAGC 60.153 63.158 0.00 0.00 0.00 4.70
3154 9177 0.905357 AAGGACAGGGTGAATCGGAG 59.095 55.000 0.00 0.00 0.00 4.63
3155 9178 1.358152 AAAGGACAGGGTGAATCGGA 58.642 50.000 0.00 0.00 0.00 4.55
3156 9179 1.812571 CAAAAGGACAGGGTGAATCGG 59.187 52.381 0.00 0.00 0.00 4.18
3157 9180 1.812571 CCAAAAGGACAGGGTGAATCG 59.187 52.381 0.00 0.00 0.00 3.34
3158 9181 2.876581 ACCAAAAGGACAGGGTGAATC 58.123 47.619 0.00 0.00 31.04 2.52
3163 9186 2.543037 AAACACCAAAAGGACAGGGT 57.457 45.000 0.00 0.00 0.00 4.34
3164 9187 3.904800 AAAAACACCAAAAGGACAGGG 57.095 42.857 0.00 0.00 0.00 4.45
3182 9205 6.425721 ACTGCGAGTACTATAGCAAACAAAAA 59.574 34.615 17.23 0.00 39.26 1.94
3183 9206 5.929992 ACTGCGAGTACTATAGCAAACAAAA 59.070 36.000 17.23 0.00 39.26 2.44
3184 9207 5.475719 ACTGCGAGTACTATAGCAAACAAA 58.524 37.500 17.23 0.00 39.26 2.83
3185 9208 5.068234 ACTGCGAGTACTATAGCAAACAA 57.932 39.130 17.23 0.08 39.26 2.83
3186 9209 4.713824 ACTGCGAGTACTATAGCAAACA 57.286 40.909 17.23 0.36 39.26 2.83
3187 9210 5.213675 CCTACTGCGAGTACTATAGCAAAC 58.786 45.833 17.23 0.00 39.26 2.93
3188 9211 4.261489 GCCTACTGCGAGTACTATAGCAAA 60.261 45.833 17.23 10.07 39.26 3.68
3189 9212 3.252701 GCCTACTGCGAGTACTATAGCAA 59.747 47.826 17.23 6.63 39.26 3.91
3190 9213 2.812591 GCCTACTGCGAGTACTATAGCA 59.187 50.000 16.14 16.14 38.03 3.49
3191 9214 3.474693 GCCTACTGCGAGTACTATAGC 57.525 52.381 0.00 2.75 0.00 2.97
3203 9226 1.618487 AGTACGGGATAGCCTACTGC 58.382 55.000 0.00 0.00 41.71 4.40
3204 9227 3.501445 GTGTAGTACGGGATAGCCTACTG 59.499 52.174 8.75 0.00 30.37 2.74
3205 9228 3.137176 TGTGTAGTACGGGATAGCCTACT 59.863 47.826 0.00 0.19 31.98 2.57
3206 9229 3.251972 GTGTGTAGTACGGGATAGCCTAC 59.748 52.174 0.00 0.00 0.00 3.18
3207 9230 3.137176 AGTGTGTAGTACGGGATAGCCTA 59.863 47.826 0.00 0.00 0.00 3.93
3208 9231 2.091994 AGTGTGTAGTACGGGATAGCCT 60.092 50.000 0.00 0.00 0.00 4.58
3209 9232 2.292845 GAGTGTGTAGTACGGGATAGCC 59.707 54.545 0.00 0.00 0.00 3.93
3210 9233 2.032204 CGAGTGTGTAGTACGGGATAGC 60.032 54.545 0.00 0.00 0.00 2.97
3211 9234 2.032204 GCGAGTGTGTAGTACGGGATAG 60.032 54.545 0.00 0.00 0.00 2.08
3212 9235 1.942657 GCGAGTGTGTAGTACGGGATA 59.057 52.381 0.00 0.00 0.00 2.59
3213 9236 0.737219 GCGAGTGTGTAGTACGGGAT 59.263 55.000 0.00 0.00 0.00 3.85
3214 9237 1.308069 GGCGAGTGTGTAGTACGGGA 61.308 60.000 0.00 0.00 0.00 5.14
3215 9238 1.138247 GGCGAGTGTGTAGTACGGG 59.862 63.158 0.00 0.00 0.00 5.28
3216 9239 0.454600 ATGGCGAGTGTGTAGTACGG 59.545 55.000 0.00 0.00 0.00 4.02
3217 9240 2.273370 AATGGCGAGTGTGTAGTACG 57.727 50.000 0.00 0.00 0.00 3.67
3218 9241 4.100707 TGTAATGGCGAGTGTGTAGTAC 57.899 45.455 0.00 0.00 0.00 2.73
3219 9242 4.022155 TGTTGTAATGGCGAGTGTGTAGTA 60.022 41.667 0.00 0.00 0.00 1.82
3220 9243 3.243941 TGTTGTAATGGCGAGTGTGTAGT 60.244 43.478 0.00 0.00 0.00 2.73
3221 9244 3.322369 TGTTGTAATGGCGAGTGTGTAG 58.678 45.455 0.00 0.00 0.00 2.74
3222 9245 3.388345 TGTTGTAATGGCGAGTGTGTA 57.612 42.857 0.00 0.00 0.00 2.90
3223 9246 2.248280 TGTTGTAATGGCGAGTGTGT 57.752 45.000 0.00 0.00 0.00 3.72
3224 9247 3.932710 AGTATGTTGTAATGGCGAGTGTG 59.067 43.478 0.00 0.00 0.00 3.82
3225 9248 4.081642 AGAGTATGTTGTAATGGCGAGTGT 60.082 41.667 0.00 0.00 0.00 3.55
3226 9249 4.433615 AGAGTATGTTGTAATGGCGAGTG 58.566 43.478 0.00 0.00 0.00 3.51
3227 9250 4.737855 AGAGTATGTTGTAATGGCGAGT 57.262 40.909 0.00 0.00 0.00 4.18
3228 9251 8.297426 TCTAATAGAGTATGTTGTAATGGCGAG 58.703 37.037 0.00 0.00 0.00 5.03
3229 9252 8.080417 GTCTAATAGAGTATGTTGTAATGGCGA 58.920 37.037 0.00 0.00 0.00 5.54
3230 9253 7.060748 CGTCTAATAGAGTATGTTGTAATGGCG 59.939 40.741 0.00 0.00 0.00 5.69
3231 9254 8.080417 TCGTCTAATAGAGTATGTTGTAATGGC 58.920 37.037 0.00 0.00 0.00 4.40
3232 9255 9.613957 CTCGTCTAATAGAGTATGTTGTAATGG 57.386 37.037 0.00 0.00 0.00 3.16
3233 9256 9.613957 CCTCGTCTAATAGAGTATGTTGTAATG 57.386 37.037 0.00 0.00 32.88 1.90
3234 9257 9.352191 ACCTCGTCTAATAGAGTATGTTGTAAT 57.648 33.333 0.00 0.00 32.88 1.89
3235 9258 8.743085 ACCTCGTCTAATAGAGTATGTTGTAA 57.257 34.615 0.00 0.00 32.88 2.41
3236 9259 9.836864 TTACCTCGTCTAATAGAGTATGTTGTA 57.163 33.333 0.00 0.00 32.88 2.41
3237 9260 8.619546 GTTACCTCGTCTAATAGAGTATGTTGT 58.380 37.037 0.00 0.00 32.88 3.32
3238 9261 7.797587 CGTTACCTCGTCTAATAGAGTATGTTG 59.202 40.741 0.00 0.00 32.88 3.33
3239 9262 7.497249 ACGTTACCTCGTCTAATAGAGTATGTT 59.503 37.037 0.00 0.00 40.04 2.71
3240 9263 6.989169 ACGTTACCTCGTCTAATAGAGTATGT 59.011 38.462 0.00 0.00 40.04 2.29
3241 9264 7.042187 ACACGTTACCTCGTCTAATAGAGTATG 60.042 40.741 0.00 0.00 42.27 2.39
3242 9265 6.989169 ACACGTTACCTCGTCTAATAGAGTAT 59.011 38.462 0.00 0.00 42.27 2.12
3243 9266 6.256539 CACACGTTACCTCGTCTAATAGAGTA 59.743 42.308 0.00 0.00 42.27 2.59
3244 9267 5.064452 CACACGTTACCTCGTCTAATAGAGT 59.936 44.000 0.00 0.00 42.27 3.24
3245 9268 5.064452 ACACACGTTACCTCGTCTAATAGAG 59.936 44.000 0.00 0.00 42.27 2.43
3246 9269 4.937620 ACACACGTTACCTCGTCTAATAGA 59.062 41.667 0.00 0.00 42.27 1.98
3247 9270 5.227238 ACACACGTTACCTCGTCTAATAG 57.773 43.478 0.00 0.00 42.27 1.73
3248 9271 5.627499 AACACACGTTACCTCGTCTAATA 57.373 39.130 0.00 0.00 42.27 0.98
3249 9272 4.479619 GAACACACGTTACCTCGTCTAAT 58.520 43.478 0.00 0.00 42.27 1.73
3250 9273 3.888934 GAACACACGTTACCTCGTCTAA 58.111 45.455 0.00 0.00 42.27 2.10
3251 9274 3.542712 GAACACACGTTACCTCGTCTA 57.457 47.619 0.00 0.00 42.27 2.59
3252 9275 2.412421 GAACACACGTTACCTCGTCT 57.588 50.000 0.00 0.00 42.27 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.