Multiple sequence alignment - TraesCS5D01G522500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G522500 chr5D 100.000 4524 0 0 1 4524 543065780 543070303 0.000000e+00 8355.0
1 TraesCS5D01G522500 chr5D 83.358 2043 283 36 2124 4117 543092387 543094421 0.000000e+00 1836.0
2 TraesCS5D01G522500 chr5D 80.019 2057 335 48 2120 4126 543099620 543101650 0.000000e+00 1452.0
3 TraesCS5D01G522500 chr5D 79.742 2019 326 51 2122 4099 543229358 543231334 0.000000e+00 1386.0
4 TraesCS5D01G522500 chr5D 81.152 1528 247 30 2616 4126 543213848 543215351 0.000000e+00 1188.0
5 TraesCS5D01G522500 chr5D 80.843 1519 248 26 2636 4126 543223768 543225271 0.000000e+00 1153.0
6 TraesCS5D01G522500 chr5D 79.477 1262 205 35 2125 3348 543235434 543236679 0.000000e+00 846.0
7 TraesCS5D01G522500 chr5D 77.165 1559 282 55 2638 4142 542109492 542111030 0.000000e+00 839.0
8 TraesCS5D01G522500 chr5D 78.882 644 123 9 2645 3280 543271434 543272072 1.500000e-114 424.0
9 TraesCS5D01G522500 chr5D 79.869 457 74 9 2131 2574 543213319 543213770 7.300000e-83 318.0
10 TraesCS5D01G522500 chr5B 95.856 2534 105 0 1985 4518 684577819 684580352 0.000000e+00 4098.0
11 TraesCS5D01G522500 chr5B 79.669 2056 344 47 2120 4126 684603946 684605976 0.000000e+00 1413.0
12 TraesCS5D01G522500 chr5B 80.383 1672 256 39 2125 3760 684690288 684691923 0.000000e+00 1205.0
13 TraesCS5D01G522500 chr5B 81.012 1522 243 37 2616 4126 684611023 684612509 0.000000e+00 1168.0
14 TraesCS5D01G522500 chr5B 93.443 427 19 4 944 1365 684576993 684577415 3.840000e-175 625.0
15 TraesCS5D01G522500 chr5B 85.714 602 38 16 162 740 684576418 684576994 3.900000e-165 592.0
16 TraesCS5D01G522500 chr5B 94.587 351 10 5 1641 1983 684577407 684577756 6.660000e-148 534.0
17 TraesCS5D01G522500 chr5B 79.346 489 78 11 2102 2574 684610464 684610945 5.650000e-84 322.0
18 TraesCS5D01G522500 chr5B 82.069 290 39 6 1357 1634 8354159 8353871 7.570000e-58 235.0
19 TraesCS5D01G522500 chr5B 90.299 134 12 1 840 972 397293653 397293520 1.670000e-39 174.0
20 TraesCS5D01G522500 chr5B 90.741 54 5 0 2661 2714 557110430 557110483 6.280000e-09 73.1
21 TraesCS5D01G522500 chr4A 84.890 1767 235 22 2372 4112 626074935 626073175 0.000000e+00 1755.0
22 TraesCS5D01G522500 chr4A 80.010 2056 337 47 2120 4126 626066033 626064003 0.000000e+00 1452.0
23 TraesCS5D01G522500 chr4A 87.510 1241 70 24 158 1367 626078884 626077698 0.000000e+00 1354.0
24 TraesCS5D01G522500 chr4A 93.318 898 35 8 1638 2515 626077702 626076810 0.000000e+00 1303.0
25 TraesCS5D01G522500 chr4A 82.046 1515 224 28 2606 4099 626013915 626012428 0.000000e+00 1247.0
26 TraesCS5D01G522500 chr4A 81.217 1528 243 33 2616 4124 626049131 626047629 0.000000e+00 1192.0
27 TraesCS5D01G522500 chr4A 80.510 1529 260 25 2623 4125 626022079 626020563 0.000000e+00 1138.0
28 TraesCS5D01G522500 chr4A 81.673 1315 204 24 2813 4117 625995904 625994617 0.000000e+00 1059.0
29 TraesCS5D01G522500 chr4A 88.213 526 40 8 3731 4255 626076812 626076308 3.870000e-170 608.0
30 TraesCS5D01G522500 chr4A 79.747 474 71 16 2120 2574 626049676 626049209 2.030000e-83 320.0
31 TraesCS5D01G522500 chr4A 91.603 131 10 1 840 969 557106658 557106788 3.600000e-41 180.0
32 TraesCS5D01G522500 chr3D 90.596 755 52 9 628 1364 33704022 33704775 0.000000e+00 983.0
33 TraesCS5D01G522500 chr3D 94.571 350 16 1 1636 1985 33704775 33705121 5.150000e-149 538.0
34 TraesCS5D01G522500 chr3D 97.059 68 2 0 1986 2053 33705182 33705249 1.030000e-21 115.0
35 TraesCS5D01G522500 chr3B 89.085 284 26 4 1361 1640 61536475 61536193 9.310000e-92 348.0
36 TraesCS5D01G522500 chr3A 87.197 289 35 2 1357 1644 435805075 435805362 1.210000e-85 327.0
37 TraesCS5D01G522500 chr3A 90.960 177 14 2 1464 1639 612984487 612984662 2.100000e-58 237.0
38 TraesCS5D01G522500 chr3A 91.791 134 10 1 840 972 411272849 411272716 7.730000e-43 185.0
39 TraesCS5D01G522500 chr3A 90.299 134 12 1 840 972 193872168 193872035 1.670000e-39 174.0
40 TraesCS5D01G522500 chr3A 100.000 29 0 0 1611 1639 657040290 657040318 2.000000e-03 54.7
41 TraesCS5D01G522500 chr2D 87.189 281 29 7 1363 1639 572692876 572692599 3.400000e-81 313.0
42 TraesCS5D01G522500 chr1D 86.713 286 28 8 1368 1647 85844883 85844602 4.400000e-80 309.0
43 TraesCS5D01G522500 chr4D 86.316 285 28 2 1363 1646 10985976 10986250 2.650000e-77 300.0
44 TraesCS5D01G522500 chr6B 84.642 293 39 6 1356 1643 452159325 452159034 2.060000e-73 287.0
45 TraesCS5D01G522500 chr6B 82.061 262 39 7 1363 1618 38983810 38983551 2.740000e-52 217.0
46 TraesCS5D01G522500 chr2B 84.932 292 27 9 1362 1640 232780327 232780040 3.450000e-71 279.0
47 TraesCS5D01G522500 chr6D 93.130 131 8 1 840 969 79969513 79969643 1.660000e-44 191.0
48 TraesCS5D01G522500 chr5A 90.840 131 11 1 840 969 510197716 510197846 1.670000e-39 174.0
49 TraesCS5D01G522500 chrUn 74.623 398 87 9 3104 3492 476094961 476094569 3.620000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G522500 chr5D 543065780 543070303 4523 False 8355.000000 8355 100.000000 1 4524 1 chr5D.!!$F2 4523
1 TraesCS5D01G522500 chr5D 543092387 543094421 2034 False 1836.000000 1836 83.358000 2124 4117 1 chr5D.!!$F3 1993
2 TraesCS5D01G522500 chr5D 543099620 543101650 2030 False 1452.000000 1452 80.019000 2120 4126 1 chr5D.!!$F4 2006
3 TraesCS5D01G522500 chr5D 543229358 543231334 1976 False 1386.000000 1386 79.742000 2122 4099 1 chr5D.!!$F6 1977
4 TraesCS5D01G522500 chr5D 543223768 543225271 1503 False 1153.000000 1153 80.843000 2636 4126 1 chr5D.!!$F5 1490
5 TraesCS5D01G522500 chr5D 543235434 543236679 1245 False 846.000000 846 79.477000 2125 3348 1 chr5D.!!$F7 1223
6 TraesCS5D01G522500 chr5D 542109492 542111030 1538 False 839.000000 839 77.165000 2638 4142 1 chr5D.!!$F1 1504
7 TraesCS5D01G522500 chr5D 543213319 543215351 2032 False 753.000000 1188 80.510500 2131 4126 2 chr5D.!!$F9 1995
8 TraesCS5D01G522500 chr5D 543271434 543272072 638 False 424.000000 424 78.882000 2645 3280 1 chr5D.!!$F8 635
9 TraesCS5D01G522500 chr5B 684576418 684580352 3934 False 1462.250000 4098 92.400000 162 4518 4 chr5B.!!$F4 4356
10 TraesCS5D01G522500 chr5B 684603946 684605976 2030 False 1413.000000 1413 79.669000 2120 4126 1 chr5B.!!$F2 2006
11 TraesCS5D01G522500 chr5B 684690288 684691923 1635 False 1205.000000 1205 80.383000 2125 3760 1 chr5B.!!$F3 1635
12 TraesCS5D01G522500 chr5B 684610464 684612509 2045 False 745.000000 1168 80.179000 2102 4126 2 chr5B.!!$F5 2024
13 TraesCS5D01G522500 chr4A 626064003 626066033 2030 True 1452.000000 1452 80.010000 2120 4126 1 chr4A.!!$R4 2006
14 TraesCS5D01G522500 chr4A 626073175 626078884 5709 True 1255.000000 1755 88.482750 158 4255 4 chr4A.!!$R6 4097
15 TraesCS5D01G522500 chr4A 626012428 626013915 1487 True 1247.000000 1247 82.046000 2606 4099 1 chr4A.!!$R2 1493
16 TraesCS5D01G522500 chr4A 626020563 626022079 1516 True 1138.000000 1138 80.510000 2623 4125 1 chr4A.!!$R3 1502
17 TraesCS5D01G522500 chr4A 625994617 625995904 1287 True 1059.000000 1059 81.673000 2813 4117 1 chr4A.!!$R1 1304
18 TraesCS5D01G522500 chr4A 626047629 626049676 2047 True 756.000000 1192 80.482000 2120 4124 2 chr4A.!!$R5 2004
19 TraesCS5D01G522500 chr3D 33704022 33705249 1227 False 545.333333 983 94.075333 628 2053 3 chr3D.!!$F1 1425

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
700 735 0.037326 TGGACGAGTCTGGCATGAAC 60.037 55.0 0.00 0.0 0.00 3.18 F
734 769 0.107410 AGACAAAACGCCACTGTCCA 60.107 50.0 4.47 0.0 40.29 4.02 F
1521 1598 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.0 5.23 0.0 44.66 3.13 F
1525 1602 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.0 44.66 2.12 F
1526 1603 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.0 5.23 0.0 44.66 2.24 F
3207 5568 0.384309 CGCTAGATGACGCCCTTGTA 59.616 55.0 0.00 0.0 0.00 2.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1502 1579 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12 R
2306 2537 0.599204 GTGACGACAGAAAAGGCGGA 60.599 55.000 0.00 0.00 0.00 5.54 R
2662 4978 1.153147 GGCTTCATCGACCCCCTTC 60.153 63.158 0.00 0.00 0.00 3.46 R
3207 5568 2.197324 TCAAAACGCCCAGGCCTT 59.803 55.556 0.00 0.00 37.98 4.35 R
3521 5900 3.093814 TGATCTTGTCCTTGGCGTACTA 58.906 45.455 0.00 0.00 0.00 1.82 R
4235 6677 1.605232 CACTCTCTGTGCATGCAACAA 59.395 47.619 24.58 10.41 40.06 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.892445 GCACATAAATTTTGTACGGTCTATG 57.108 36.000 0.00 0.00 0.00 2.23
25 26 7.469260 GCACATAAATTTTGTACGGTCTATGT 58.531 34.615 0.00 0.00 30.78 2.29
26 27 7.966204 GCACATAAATTTTGTACGGTCTATGTT 59.034 33.333 0.00 0.00 28.75 2.71
31 32 6.636666 ATTTTGTACGGTCTATGTTACACG 57.363 37.500 0.00 0.00 0.00 4.49
32 33 3.763097 TGTACGGTCTATGTTACACGG 57.237 47.619 0.00 0.00 0.00 4.94
33 34 3.081061 TGTACGGTCTATGTTACACGGT 58.919 45.455 0.00 0.00 0.00 4.83
34 35 4.257731 TGTACGGTCTATGTTACACGGTA 58.742 43.478 0.00 0.00 0.00 4.02
35 36 4.697828 TGTACGGTCTATGTTACACGGTAA 59.302 41.667 0.00 0.00 30.41 2.85
36 37 4.782019 ACGGTCTATGTTACACGGTAAA 57.218 40.909 0.00 0.00 0.00 2.01
37 38 5.329035 ACGGTCTATGTTACACGGTAAAT 57.671 39.130 0.00 0.00 0.00 1.40
38 39 6.449635 ACGGTCTATGTTACACGGTAAATA 57.550 37.500 0.00 0.00 0.00 1.40
39 40 6.862209 ACGGTCTATGTTACACGGTAAATAA 58.138 36.000 0.00 0.00 0.00 1.40
40 41 7.491682 ACGGTCTATGTTACACGGTAAATAAT 58.508 34.615 0.00 0.00 0.00 1.28
41 42 7.981225 ACGGTCTATGTTACACGGTAAATAATT 59.019 33.333 0.00 0.00 0.00 1.40
42 43 8.270799 CGGTCTATGTTACACGGTAAATAATTG 58.729 37.037 0.00 0.00 0.00 2.32
43 44 9.101655 GGTCTATGTTACACGGTAAATAATTGT 57.898 33.333 0.00 0.00 0.00 2.71
60 61 8.602472 AATAATTGTAAATTCAGTTAGGGGCA 57.398 30.769 0.00 0.00 0.00 5.36
61 62 6.926630 AATTGTAAATTCAGTTAGGGGCAA 57.073 33.333 0.00 0.00 0.00 4.52
62 63 5.975693 TTGTAAATTCAGTTAGGGGCAAG 57.024 39.130 0.00 0.00 0.00 4.01
63 64 4.340617 TGTAAATTCAGTTAGGGGCAAGG 58.659 43.478 0.00 0.00 0.00 3.61
64 65 3.542969 AAATTCAGTTAGGGGCAAGGT 57.457 42.857 0.00 0.00 0.00 3.50
65 66 3.542969 AATTCAGTTAGGGGCAAGGTT 57.457 42.857 0.00 0.00 0.00 3.50
66 67 3.542969 ATTCAGTTAGGGGCAAGGTTT 57.457 42.857 0.00 0.00 0.00 3.27
67 68 2.286365 TCAGTTAGGGGCAAGGTTTG 57.714 50.000 0.00 0.00 0.00 2.93
68 69 1.777878 TCAGTTAGGGGCAAGGTTTGA 59.222 47.619 0.00 0.00 0.00 2.69
69 70 2.378547 TCAGTTAGGGGCAAGGTTTGAT 59.621 45.455 0.00 0.00 0.00 2.57
70 71 2.755103 CAGTTAGGGGCAAGGTTTGATC 59.245 50.000 0.00 0.00 0.00 2.92
71 72 2.378547 AGTTAGGGGCAAGGTTTGATCA 59.621 45.455 0.00 0.00 0.00 2.92
72 73 3.161866 GTTAGGGGCAAGGTTTGATCAA 58.838 45.455 3.38 3.38 0.00 2.57
73 74 2.629017 AGGGGCAAGGTTTGATCAAT 57.371 45.000 9.40 0.00 0.00 2.57
74 75 2.906568 AGGGGCAAGGTTTGATCAATT 58.093 42.857 9.40 0.00 0.00 2.32
75 76 3.250617 AGGGGCAAGGTTTGATCAATTT 58.749 40.909 9.40 1.96 0.00 1.82
76 77 4.424842 AGGGGCAAGGTTTGATCAATTTA 58.575 39.130 9.40 0.00 0.00 1.40
77 78 5.032170 AGGGGCAAGGTTTGATCAATTTAT 58.968 37.500 9.40 0.00 0.00 1.40
78 79 6.201591 AGGGGCAAGGTTTGATCAATTTATA 58.798 36.000 9.40 0.00 0.00 0.98
79 80 6.324770 AGGGGCAAGGTTTGATCAATTTATAG 59.675 38.462 9.40 0.00 0.00 1.31
80 81 5.985530 GGGCAAGGTTTGATCAATTTATAGC 59.014 40.000 9.40 9.43 0.00 2.97
81 82 6.406849 GGGCAAGGTTTGATCAATTTATAGCA 60.407 38.462 9.40 0.00 0.00 3.49
82 83 7.041107 GGCAAGGTTTGATCAATTTATAGCAA 58.959 34.615 9.40 0.00 0.00 3.91
83 84 7.548780 GGCAAGGTTTGATCAATTTATAGCAAA 59.451 33.333 9.40 0.00 0.00 3.68
84 85 8.934825 GCAAGGTTTGATCAATTTATAGCAAAA 58.065 29.630 9.40 0.00 0.00 2.44
87 88 9.995003 AGGTTTGATCAATTTATAGCAAAAACA 57.005 25.926 9.40 0.00 0.00 2.83
101 102 5.880341 AGCAAAAACAATCGAATAGCTACC 58.120 37.500 0.00 0.00 0.00 3.18
102 103 5.414454 AGCAAAAACAATCGAATAGCTACCA 59.586 36.000 0.00 0.00 0.00 3.25
103 104 6.095440 AGCAAAAACAATCGAATAGCTACCAT 59.905 34.615 0.00 0.00 0.00 3.55
104 105 6.197096 GCAAAAACAATCGAATAGCTACCATG 59.803 38.462 0.00 0.00 0.00 3.66
105 106 7.471721 CAAAAACAATCGAATAGCTACCATGA 58.528 34.615 0.00 0.00 0.00 3.07
106 107 7.807977 AAAACAATCGAATAGCTACCATGAT 57.192 32.000 0.00 0.00 0.00 2.45
107 108 6.791887 AACAATCGAATAGCTACCATGATG 57.208 37.500 0.00 0.00 0.00 3.07
108 109 6.101650 ACAATCGAATAGCTACCATGATGA 57.898 37.500 0.00 0.00 0.00 2.92
109 110 6.705302 ACAATCGAATAGCTACCATGATGAT 58.295 36.000 0.00 0.00 0.00 2.45
110 111 6.815641 ACAATCGAATAGCTACCATGATGATC 59.184 38.462 0.00 0.00 0.00 2.92
111 112 5.982890 TCGAATAGCTACCATGATGATCA 57.017 39.130 0.00 0.00 0.00 2.92
112 113 6.535963 TCGAATAGCTACCATGATGATCAT 57.464 37.500 8.25 8.25 37.65 2.45
113 114 6.939622 TCGAATAGCTACCATGATGATCATT 58.060 36.000 10.14 0.00 34.28 2.57
114 115 6.815142 TCGAATAGCTACCATGATGATCATTG 59.185 38.462 10.14 5.02 34.28 2.82
115 116 6.592994 CGAATAGCTACCATGATGATCATTGT 59.407 38.462 15.28 15.28 34.28 2.71
116 117 7.118825 CGAATAGCTACCATGATGATCATTGTT 59.881 37.037 16.01 3.15 34.28 2.83
117 118 9.440773 GAATAGCTACCATGATGATCATTGTTA 57.559 33.333 16.01 5.07 34.28 2.41
118 119 9.797642 AATAGCTACCATGATGATCATTGTTAA 57.202 29.630 16.01 0.61 34.28 2.01
119 120 9.797642 ATAGCTACCATGATGATCATTGTTAAA 57.202 29.630 16.01 0.00 34.28 1.52
120 121 8.523915 AGCTACCATGATGATCATTGTTAAAA 57.476 30.769 16.01 0.00 34.28 1.52
121 122 8.970020 AGCTACCATGATGATCATTGTTAAAAA 58.030 29.630 16.01 0.00 34.28 1.94
147 148 8.786826 AAATCTACTTCACCGAATTGTAATCA 57.213 30.769 0.00 0.00 0.00 2.57
148 149 8.425577 AATCTACTTCACCGAATTGTAATCAG 57.574 34.615 0.00 0.00 0.00 2.90
149 150 4.946784 ACTTCACCGAATTGTAATCAGC 57.053 40.909 0.00 0.00 0.00 4.26
150 151 4.323417 ACTTCACCGAATTGTAATCAGCA 58.677 39.130 0.00 0.00 0.00 4.41
151 152 4.759693 ACTTCACCGAATTGTAATCAGCAA 59.240 37.500 0.00 0.00 0.00 3.91
152 153 5.240623 ACTTCACCGAATTGTAATCAGCAAA 59.759 36.000 0.00 0.00 0.00 3.68
153 154 5.697473 TCACCGAATTGTAATCAGCAAAA 57.303 34.783 0.00 0.00 0.00 2.44
154 155 6.078202 TCACCGAATTGTAATCAGCAAAAA 57.922 33.333 0.00 0.00 0.00 1.94
155 156 6.686630 TCACCGAATTGTAATCAGCAAAAAT 58.313 32.000 0.00 0.00 0.00 1.82
156 157 7.821652 TCACCGAATTGTAATCAGCAAAAATA 58.178 30.769 0.00 0.00 0.00 1.40
157 158 8.300286 TCACCGAATTGTAATCAGCAAAAATAA 58.700 29.630 0.00 0.00 0.00 1.40
158 159 8.372521 CACCGAATTGTAATCAGCAAAAATAAC 58.627 33.333 0.00 0.00 0.00 1.89
159 160 8.085296 ACCGAATTGTAATCAGCAAAAATAACA 58.915 29.630 0.00 0.00 0.00 2.41
160 161 8.586273 CCGAATTGTAATCAGCAAAAATAACAG 58.414 33.333 0.00 0.00 0.00 3.16
161 162 9.128107 CGAATTGTAATCAGCAAAAATAACAGT 57.872 29.630 0.00 0.00 0.00 3.55
164 165 9.979578 ATTGTAATCAGCAAAAATAACAGTTGA 57.020 25.926 0.00 0.00 0.00 3.18
165 166 9.979578 TTGTAATCAGCAAAAATAACAGTTGAT 57.020 25.926 0.00 0.00 34.13 2.57
166 167 9.979578 TGTAATCAGCAAAAATAACAGTTGATT 57.020 25.926 0.00 0.00 42.13 2.57
198 199 0.102120 GCTACTGTGCTCGATCTGCT 59.898 55.000 8.62 0.00 0.00 4.24
200 201 2.458951 CTACTGTGCTCGATCTGCTTC 58.541 52.381 8.62 3.85 0.00 3.86
262 265 3.574780 GCCCGAAGCCTGTGTAAC 58.425 61.111 0.00 0.00 34.35 2.50
276 279 4.000988 CTGTGTAACGAAAGCTAATGGGT 58.999 43.478 0.00 0.00 42.39 4.51
394 425 2.760477 CATTCCCACCCCCGAACA 59.240 61.111 0.00 0.00 0.00 3.18
472 503 1.906824 AGTTCTCGTCCCGCTTCCA 60.907 57.895 0.00 0.00 0.00 3.53
610 645 1.133790 GCGCTTGCAGGAAGATTTCAT 59.866 47.619 5.73 0.00 38.92 2.57
620 655 4.820716 CAGGAAGATTTCATGGATCCAGTC 59.179 45.833 21.33 12.20 37.78 3.51
621 656 4.725810 AGGAAGATTTCATGGATCCAGTCT 59.274 41.667 21.33 14.12 0.00 3.24
622 657 5.907662 AGGAAGATTTCATGGATCCAGTCTA 59.092 40.000 21.33 6.24 0.00 2.59
623 658 6.388100 AGGAAGATTTCATGGATCCAGTCTAA 59.612 38.462 21.33 11.59 0.00 2.10
624 659 7.056635 GGAAGATTTCATGGATCCAGTCTAAA 58.943 38.462 21.33 16.28 0.00 1.85
625 660 7.557719 GGAAGATTTCATGGATCCAGTCTAAAA 59.442 37.037 21.33 14.65 0.00 1.52
626 661 8.884124 AAGATTTCATGGATCCAGTCTAAAAA 57.116 30.769 21.33 13.05 0.00 1.94
700 735 0.037326 TGGACGAGTCTGGCATGAAC 60.037 55.000 0.00 0.00 0.00 3.18
723 758 3.557595 CACTCACTGTGGAGAGACAAAAC 59.442 47.826 8.11 0.00 42.68 2.43
724 759 2.797156 CTCACTGTGGAGAGACAAAACG 59.203 50.000 8.11 0.00 37.05 3.60
725 760 1.261619 CACTGTGGAGAGACAAAACGC 59.738 52.381 0.00 0.00 0.00 4.84
726 761 0.868406 CTGTGGAGAGACAAAACGCC 59.132 55.000 0.00 0.00 0.00 5.68
727 762 0.179234 TGTGGAGAGACAAAACGCCA 59.821 50.000 0.00 0.00 33.96 5.69
728 763 0.586802 GTGGAGAGACAAAACGCCAC 59.413 55.000 0.00 0.00 45.84 5.01
729 764 0.468226 TGGAGAGACAAAACGCCACT 59.532 50.000 0.00 0.00 31.64 4.00
730 765 0.868406 GGAGAGACAAAACGCCACTG 59.132 55.000 0.00 0.00 0.00 3.66
731 766 1.583054 GAGAGACAAAACGCCACTGT 58.417 50.000 0.00 0.00 0.00 3.55
732 767 1.527311 GAGAGACAAAACGCCACTGTC 59.473 52.381 0.00 0.00 39.83 3.51
733 768 0.586802 GAGACAAAACGCCACTGTCC 59.413 55.000 4.47 0.00 40.29 4.02
734 769 0.107410 AGACAAAACGCCACTGTCCA 60.107 50.000 4.47 0.00 40.29 4.02
735 770 0.307760 GACAAAACGCCACTGTCCAG 59.692 55.000 0.00 0.00 34.63 3.86
736 771 1.101049 ACAAAACGCCACTGTCCAGG 61.101 55.000 0.00 0.00 0.00 4.45
737 772 0.817634 CAAAACGCCACTGTCCAGGA 60.818 55.000 0.00 0.00 0.00 3.86
738 773 0.110486 AAAACGCCACTGTCCAGGAT 59.890 50.000 0.00 0.00 0.00 3.24
739 774 0.606401 AAACGCCACTGTCCAGGATG 60.606 55.000 0.00 0.00 0.00 3.51
740 775 1.480212 AACGCCACTGTCCAGGATGA 61.480 55.000 0.00 0.00 39.69 2.92
741 776 1.267574 ACGCCACTGTCCAGGATGAT 61.268 55.000 0.00 0.00 39.69 2.45
742 777 0.531532 CGCCACTGTCCAGGATGATC 60.532 60.000 0.00 0.00 39.69 2.92
772 831 1.409802 CCTCAGCTCCAGCCATTTGAT 60.410 52.381 0.00 0.00 43.38 2.57
773 832 1.948145 CTCAGCTCCAGCCATTTGATC 59.052 52.381 0.00 0.00 43.38 2.92
780 839 4.015084 CTCCAGCCATTTGATCTTTGAGT 58.985 43.478 0.00 0.00 0.00 3.41
798 857 4.631234 TGAGTATCACTTATTCCCAGGGT 58.369 43.478 5.01 0.00 42.56 4.34
851 910 6.804935 AGTAATTTTACTGAGCTCCCAAGCAT 60.805 38.462 12.15 0.00 45.29 3.79
877 937 1.799917 CGTTAGGCGGCTGTTCGATTA 60.800 52.381 23.55 0.00 36.85 1.75
930 1001 7.177744 ACTGAAGGTTTGTTCAAGTCCTAAAAA 59.822 33.333 10.04 0.00 36.01 1.94
1102 1173 5.675684 TGCCAATTTTCTTTATCCCCTTC 57.324 39.130 0.00 0.00 0.00 3.46
1111 1182 3.054361 TCTTTATCCCCTTCTGCTCAACC 60.054 47.826 0.00 0.00 0.00 3.77
1321 1398 4.682778 TCAGTATACCTATGTGGCAACC 57.317 45.455 0.00 0.00 40.22 3.77
1342 1419 1.177401 GCACCTAAAAGAAGCCCCAG 58.823 55.000 0.00 0.00 0.00 4.45
1364 1441 7.040686 CCCAGTTAATTGTGCCCAATATACTAC 60.041 40.741 7.98 0.00 40.42 2.73
1367 1444 9.774413 AGTTAATTGTGCCCAATATACTACTAC 57.226 33.333 6.93 0.00 40.42 2.73
1368 1445 8.996271 GTTAATTGTGCCCAATATACTACTACC 58.004 37.037 0.00 0.00 40.42 3.18
1369 1446 7.388638 AATTGTGCCCAATATACTACTACCT 57.611 36.000 0.00 0.00 40.42 3.08
1370 1447 6.415206 TTGTGCCCAATATACTACTACCTC 57.585 41.667 0.00 0.00 0.00 3.85
1371 1448 4.836736 TGTGCCCAATATACTACTACCTCC 59.163 45.833 0.00 0.00 0.00 4.30
1372 1449 4.082354 GTGCCCAATATACTACTACCTCCG 60.082 50.000 0.00 0.00 0.00 4.63
1374 1451 4.525874 GCCCAATATACTACTACCTCCGTT 59.474 45.833 0.00 0.00 0.00 4.44
1375 1452 5.011431 GCCCAATATACTACTACCTCCGTTT 59.989 44.000 0.00 0.00 0.00 3.60
1376 1453 6.685657 CCCAATATACTACTACCTCCGTTTC 58.314 44.000 0.00 0.00 0.00 2.78
1377 1454 6.492772 CCCAATATACTACTACCTCCGTTTCT 59.507 42.308 0.00 0.00 0.00 2.52
1378 1455 7.667219 CCCAATATACTACTACCTCCGTTTCTA 59.333 40.741 0.00 0.00 0.00 2.10
1379 1456 9.071276 CCAATATACTACTACCTCCGTTTCTAA 57.929 37.037 0.00 0.00 0.00 2.10
1389 1466 9.418839 ACTACCTCCGTTTCTAAATATAAGTCT 57.581 33.333 0.00 0.00 0.00 3.24
1392 1469 9.955102 ACCTCCGTTTCTAAATATAAGTCTTTT 57.045 29.630 0.00 0.00 0.00 2.27
1418 1495 9.961265 TTAGGATTTCAGTACAATCTACATACG 57.039 33.333 0.00 0.00 32.13 3.06
1419 1496 7.434492 AGGATTTCAGTACAATCTACATACGG 58.566 38.462 0.00 0.00 32.13 4.02
1420 1497 7.287005 AGGATTTCAGTACAATCTACATACGGA 59.713 37.037 0.00 0.00 32.13 4.69
1421 1498 8.088981 GGATTTCAGTACAATCTACATACGGAT 58.911 37.037 0.00 0.00 32.13 4.18
1422 1499 8.818141 ATTTCAGTACAATCTACATACGGATG 57.182 34.615 5.94 5.94 39.16 3.51
1424 1501 8.454570 TTCAGTACAATCTACATACGGATGTA 57.545 34.615 19.32 19.32 44.77 2.29
1425 1502 8.631480 TCAGTACAATCTACATACGGATGTAT 57.369 34.615 20.64 8.38 45.42 2.29
1426 1503 9.729281 TCAGTACAATCTACATACGGATGTATA 57.271 33.333 20.64 14.23 45.42 1.47
1464 1541 8.738645 AGGGTATAGATTCACTCATTTTGTTC 57.261 34.615 0.00 0.00 0.00 3.18
1465 1542 7.775561 AGGGTATAGATTCACTCATTTTGTTCC 59.224 37.037 0.00 0.00 0.00 3.62
1466 1543 7.254795 GGGTATAGATTCACTCATTTTGTTCCG 60.255 40.741 0.00 0.00 0.00 4.30
1467 1544 7.280205 GGTATAGATTCACTCATTTTGTTCCGT 59.720 37.037 0.00 0.00 0.00 4.69
1468 1545 9.309516 GTATAGATTCACTCATTTTGTTCCGTA 57.690 33.333 0.00 0.00 0.00 4.02
1469 1546 8.964476 ATAGATTCACTCATTTTGTTCCGTAT 57.036 30.769 0.00 0.00 0.00 3.06
1470 1547 7.076842 AGATTCACTCATTTTGTTCCGTATG 57.923 36.000 0.00 0.00 0.00 2.39
1471 1548 6.655003 AGATTCACTCATTTTGTTCCGTATGT 59.345 34.615 0.00 0.00 0.00 2.29
1472 1549 7.822334 AGATTCACTCATTTTGTTCCGTATGTA 59.178 33.333 0.00 0.00 0.00 2.29
1473 1550 6.961359 TCACTCATTTTGTTCCGTATGTAG 57.039 37.500 0.00 0.00 0.00 2.74
1474 1551 6.460781 TCACTCATTTTGTTCCGTATGTAGT 58.539 36.000 0.00 0.00 0.00 2.73
1475 1552 6.588756 TCACTCATTTTGTTCCGTATGTAGTC 59.411 38.462 0.00 0.00 0.00 2.59
1476 1553 5.873164 ACTCATTTTGTTCCGTATGTAGTCC 59.127 40.000 0.00 0.00 0.00 3.85
1477 1554 5.180271 TCATTTTGTTCCGTATGTAGTCCC 58.820 41.667 0.00 0.00 0.00 4.46
1478 1555 4.895668 TTTTGTTCCGTATGTAGTCCCT 57.104 40.909 0.00 0.00 0.00 4.20
1479 1556 4.895668 TTTGTTCCGTATGTAGTCCCTT 57.104 40.909 0.00 0.00 0.00 3.95
1480 1557 5.999205 TTTGTTCCGTATGTAGTCCCTTA 57.001 39.130 0.00 0.00 0.00 2.69
1481 1558 6.549433 TTTGTTCCGTATGTAGTCCCTTAT 57.451 37.500 0.00 0.00 0.00 1.73
1482 1559 6.549433 TTGTTCCGTATGTAGTCCCTTATT 57.451 37.500 0.00 0.00 0.00 1.40
1483 1560 5.909477 TGTTCCGTATGTAGTCCCTTATTG 58.091 41.667 0.00 0.00 0.00 1.90
1484 1561 5.163385 TGTTCCGTATGTAGTCCCTTATTGG 60.163 44.000 0.00 0.00 0.00 3.16
1485 1562 4.806892 TCCGTATGTAGTCCCTTATTGGA 58.193 43.478 0.00 0.00 38.35 3.53
1486 1563 5.210430 TCCGTATGTAGTCCCTTATTGGAA 58.790 41.667 0.00 0.00 35.80 3.53
1487 1564 5.842328 TCCGTATGTAGTCCCTTATTGGAAT 59.158 40.000 0.00 0.00 35.80 3.01
1488 1565 6.014840 TCCGTATGTAGTCCCTTATTGGAATC 60.015 42.308 0.00 0.00 35.80 2.52
1489 1566 6.014499 CCGTATGTAGTCCCTTATTGGAATCT 60.014 42.308 0.00 0.00 35.80 2.40
1490 1567 7.091443 CGTATGTAGTCCCTTATTGGAATCTC 58.909 42.308 0.00 0.00 35.80 2.75
1491 1568 7.039644 CGTATGTAGTCCCTTATTGGAATCTCT 60.040 40.741 0.00 0.00 35.80 3.10
1492 1569 9.310449 GTATGTAGTCCCTTATTGGAATCTCTA 57.690 37.037 0.00 0.00 35.80 2.43
1493 1570 8.798975 ATGTAGTCCCTTATTGGAATCTCTAA 57.201 34.615 0.00 0.00 35.80 2.10
1494 1571 8.618240 TGTAGTCCCTTATTGGAATCTCTAAA 57.382 34.615 0.00 0.00 35.80 1.85
1495 1572 9.053472 TGTAGTCCCTTATTGGAATCTCTAAAA 57.947 33.333 0.00 0.00 35.80 1.52
1496 1573 9.901172 GTAGTCCCTTATTGGAATCTCTAAAAA 57.099 33.333 0.00 0.00 35.80 1.94
1498 1575 8.615705 AGTCCCTTATTGGAATCTCTAAAAAGT 58.384 33.333 0.00 0.00 35.80 2.66
1499 1576 8.894731 GTCCCTTATTGGAATCTCTAAAAAGTC 58.105 37.037 0.00 0.00 35.80 3.01
1500 1577 8.836735 TCCCTTATTGGAATCTCTAAAAAGTCT 58.163 33.333 0.00 0.00 38.35 3.24
1501 1578 9.467796 CCCTTATTGGAATCTCTAAAAAGTCTT 57.532 33.333 0.00 0.00 38.35 3.01
1509 1586 9.767228 GGAATCTCTAAAAAGTCTTATACTCCC 57.233 37.037 0.00 0.00 37.50 4.30
1512 1589 8.536340 TCTCTAAAAAGTCTTATACTCCCTCC 57.464 38.462 0.00 0.00 37.50 4.30
1513 1590 7.284944 TCTCTAAAAAGTCTTATACTCCCTCCG 59.715 40.741 0.00 0.00 37.50 4.63
1514 1591 6.894103 TCTAAAAAGTCTTATACTCCCTCCGT 59.106 38.462 0.00 0.00 37.50 4.69
1515 1592 5.595257 AAAAGTCTTATACTCCCTCCGTC 57.405 43.478 0.00 0.00 37.50 4.79
1516 1593 3.226682 AGTCTTATACTCCCTCCGTCC 57.773 52.381 0.00 0.00 30.33 4.79
1517 1594 1.878734 GTCTTATACTCCCTCCGTCCG 59.121 57.143 0.00 0.00 0.00 4.79
1518 1595 1.202855 TCTTATACTCCCTCCGTCCGG 60.203 57.143 0.00 0.00 0.00 5.14
1519 1596 0.846015 TTATACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
1520 1597 0.846015 TATACTCCCTCCGTCCGGAA 59.154 55.000 5.23 0.00 44.66 4.30
1521 1598 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
1522 1599 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
1523 1600 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
1524 1601 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
1525 1602 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
1526 1603 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
1527 1604 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1528 1605 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1529 1606 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1530 1607 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
1531 1608 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
1532 1609 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
1533 1610 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
1534 1611 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
1535 1612 2.827322 TCCGGAAATACTTGTCGGAGAA 59.173 45.455 0.00 0.00 43.84 2.87
1536 1613 3.258872 TCCGGAAATACTTGTCGGAGAAA 59.741 43.478 0.00 0.00 43.84 2.52
1537 1614 4.081309 TCCGGAAATACTTGTCGGAGAAAT 60.081 41.667 0.00 0.00 43.84 2.17
1538 1615 4.034048 CCGGAAATACTTGTCGGAGAAATG 59.966 45.833 0.00 0.00 42.94 2.32
1539 1616 4.494199 CGGAAATACTTGTCGGAGAAATGC 60.494 45.833 0.00 0.00 39.69 3.56
1540 1617 4.394920 GGAAATACTTGTCGGAGAAATGCA 59.605 41.667 0.00 0.00 39.69 3.96
1541 1618 5.066505 GGAAATACTTGTCGGAGAAATGCAT 59.933 40.000 0.00 0.00 39.69 3.96
1542 1619 6.260050 GGAAATACTTGTCGGAGAAATGCATA 59.740 38.462 0.00 0.00 39.69 3.14
1543 1620 7.201696 GGAAATACTTGTCGGAGAAATGCATAA 60.202 37.037 0.00 0.00 39.69 1.90
1544 1621 7.624360 AATACTTGTCGGAGAAATGCATAAA 57.376 32.000 0.00 0.00 39.69 1.40
1545 1622 5.957842 ACTTGTCGGAGAAATGCATAAAA 57.042 34.783 0.00 0.00 39.69 1.52
1546 1623 5.942872 ACTTGTCGGAGAAATGCATAAAAG 58.057 37.500 0.00 0.00 39.69 2.27
1547 1624 5.473504 ACTTGTCGGAGAAATGCATAAAAGT 59.526 36.000 0.00 0.00 39.69 2.66
1548 1625 5.295431 TGTCGGAGAAATGCATAAAAGTG 57.705 39.130 0.00 0.00 39.69 3.16
1549 1626 5.000591 TGTCGGAGAAATGCATAAAAGTGA 58.999 37.500 0.00 0.00 39.69 3.41
1550 1627 5.471797 TGTCGGAGAAATGCATAAAAGTGAA 59.528 36.000 0.00 0.00 39.69 3.18
1551 1628 6.150976 TGTCGGAGAAATGCATAAAAGTGAAT 59.849 34.615 0.00 0.00 39.69 2.57
1552 1629 6.470235 GTCGGAGAAATGCATAAAAGTGAATG 59.530 38.462 0.00 0.00 39.69 2.67
1553 1630 6.150976 TCGGAGAAATGCATAAAAGTGAATGT 59.849 34.615 0.00 0.00 0.00 2.71
1554 1631 7.335673 TCGGAGAAATGCATAAAAGTGAATGTA 59.664 33.333 0.00 0.00 0.00 2.29
1555 1632 8.131100 CGGAGAAATGCATAAAAGTGAATGTAT 58.869 33.333 0.00 0.00 30.86 2.29
1556 1633 9.455847 GGAGAAATGCATAAAAGTGAATGTATC 57.544 33.333 0.00 0.00 29.57 2.24
1563 1640 9.890629 TGCATAAAAGTGAATGTATCTAGAACT 57.109 29.630 0.00 0.00 0.00 3.01
1592 1669 6.865834 ATGTCTAGATACATCCATTCCTCC 57.134 41.667 0.00 0.00 35.08 4.30
1593 1670 4.767409 TGTCTAGATACATCCATTCCTCCG 59.233 45.833 0.00 0.00 0.00 4.63
1594 1671 5.010933 GTCTAGATACATCCATTCCTCCGA 58.989 45.833 0.00 0.00 0.00 4.55
1595 1672 5.010933 TCTAGATACATCCATTCCTCCGAC 58.989 45.833 0.00 0.00 0.00 4.79
1596 1673 3.576861 AGATACATCCATTCCTCCGACA 58.423 45.455 0.00 0.00 0.00 4.35
1597 1674 3.967326 AGATACATCCATTCCTCCGACAA 59.033 43.478 0.00 0.00 0.00 3.18
1598 1675 2.698855 ACATCCATTCCTCCGACAAG 57.301 50.000 0.00 0.00 0.00 3.16
1599 1676 1.909302 ACATCCATTCCTCCGACAAGT 59.091 47.619 0.00 0.00 0.00 3.16
1600 1677 3.104512 ACATCCATTCCTCCGACAAGTA 58.895 45.455 0.00 0.00 0.00 2.24
1601 1678 3.711704 ACATCCATTCCTCCGACAAGTAT 59.288 43.478 0.00 0.00 0.00 2.12
1602 1679 4.164221 ACATCCATTCCTCCGACAAGTATT 59.836 41.667 0.00 0.00 0.00 1.89
1603 1680 4.837093 TCCATTCCTCCGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
1604 1681 4.766375 TCCATTCCTCCGACAAGTATTTC 58.234 43.478 0.00 0.00 0.00 2.17
1605 1682 4.469945 TCCATTCCTCCGACAAGTATTTCT 59.530 41.667 0.00 0.00 0.00 2.52
1606 1683 4.572389 CCATTCCTCCGACAAGTATTTCTG 59.428 45.833 0.00 0.00 0.00 3.02
1607 1684 3.887621 TCCTCCGACAAGTATTTCTGG 57.112 47.619 0.00 0.00 0.00 3.86
1608 1685 3.437213 TCCTCCGACAAGTATTTCTGGA 58.563 45.455 0.00 0.00 0.00 3.86
1609 1686 3.194968 TCCTCCGACAAGTATTTCTGGAC 59.805 47.826 0.00 0.00 0.00 4.02
1610 1687 3.179830 CTCCGACAAGTATTTCTGGACG 58.820 50.000 0.00 0.00 35.64 4.79
1611 1688 2.268298 CCGACAAGTATTTCTGGACGG 58.732 52.381 0.00 0.00 45.37 4.79
1612 1689 3.226346 CGACAAGTATTTCTGGACGGA 57.774 47.619 0.00 0.00 33.12 4.69
1613 1690 3.179830 CGACAAGTATTTCTGGACGGAG 58.820 50.000 0.00 0.00 33.12 4.63
1614 1691 3.522553 GACAAGTATTTCTGGACGGAGG 58.477 50.000 0.00 0.00 0.00 4.30
1615 1692 2.236395 ACAAGTATTTCTGGACGGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
1616 1693 2.500098 CAAGTATTTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
1617 1694 2.389715 AGTATTTCTGGACGGAGGGAG 58.610 52.381 0.00 0.00 0.00 4.30
1618 1695 2.108970 GTATTTCTGGACGGAGGGAGT 58.891 52.381 0.00 0.00 0.00 3.85
1619 1696 2.544844 ATTTCTGGACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
1620 1697 2.544844 TTTCTGGACGGAGGGAGTAT 57.455 50.000 0.00 0.00 0.00 2.12
1621 1698 2.544844 TTCTGGACGGAGGGAGTATT 57.455 50.000 0.00 0.00 0.00 1.89
1622 1699 2.544844 TCTGGACGGAGGGAGTATTT 57.455 50.000 0.00 0.00 0.00 1.40
1623 1700 3.675348 TCTGGACGGAGGGAGTATTTA 57.325 47.619 0.00 0.00 0.00 1.40
1624 1701 3.563223 TCTGGACGGAGGGAGTATTTAG 58.437 50.000 0.00 0.00 0.00 1.85
1625 1702 2.628657 CTGGACGGAGGGAGTATTTAGG 59.371 54.545 0.00 0.00 0.00 2.69
1626 1703 2.245546 TGGACGGAGGGAGTATTTAGGA 59.754 50.000 0.00 0.00 0.00 2.94
1627 1704 3.303049 GGACGGAGGGAGTATTTAGGAA 58.697 50.000 0.00 0.00 0.00 3.36
1628 1705 3.069300 GGACGGAGGGAGTATTTAGGAAC 59.931 52.174 0.00 0.00 0.00 3.62
1629 1706 3.703052 GACGGAGGGAGTATTTAGGAACA 59.297 47.826 0.00 0.00 0.00 3.18
1630 1707 3.705072 ACGGAGGGAGTATTTAGGAACAG 59.295 47.826 0.00 0.00 0.00 3.16
1631 1708 3.958798 CGGAGGGAGTATTTAGGAACAGA 59.041 47.826 0.00 0.00 0.00 3.41
1632 1709 4.038162 CGGAGGGAGTATTTAGGAACAGAG 59.962 50.000 0.00 0.00 0.00 3.35
1633 1710 4.345547 GGAGGGAGTATTTAGGAACAGAGG 59.654 50.000 0.00 0.00 0.00 3.69
1634 1711 4.299485 AGGGAGTATTTAGGAACAGAGGG 58.701 47.826 0.00 0.00 0.00 4.30
1780 1864 4.887071 TGGTGCTTAATTAATGCAGGTAGG 59.113 41.667 17.24 0.00 37.39 3.18
1787 1871 2.710096 TAATGCAGGTAGGGTGCTTC 57.290 50.000 0.00 0.00 41.78 3.86
2284 2511 6.892456 TGATACAGAAGGAGTCATACAGAACT 59.108 38.462 0.00 0.00 0.00 3.01
2306 2537 6.543735 ACTTCAAAAGGCTAAGTCAAGGTAT 58.456 36.000 0.00 0.00 0.00 2.73
2318 2549 2.678336 GTCAAGGTATCCGCCTTTTCTG 59.322 50.000 0.00 0.00 45.91 3.02
2328 2560 1.126846 CGCCTTTTCTGTCGTCACATC 59.873 52.381 0.00 0.00 0.00 3.06
2602 4912 1.545706 AACTGGAGGAAGCGGAGGTC 61.546 60.000 0.00 0.00 37.06 3.85
2723 5039 4.794334 AGTTCACTACCTACGAGATCCAT 58.206 43.478 0.00 0.00 0.00 3.41
2779 5116 7.061789 GTGCAGGTGTTTTAATACAATAACTGC 59.938 37.037 23.38 23.38 40.39 4.40
3060 5421 1.640428 TCGATGAACTTGATGCCGTC 58.360 50.000 0.00 0.00 0.00 4.79
3114 5475 3.206150 GTCAAAGCAGACTCTGAACCAA 58.794 45.455 10.45 0.00 35.65 3.67
3207 5568 0.384309 CGCTAGATGACGCCCTTGTA 59.616 55.000 0.00 0.00 0.00 2.41
3282 5643 1.614525 ACAGCAGATCCTGGAGGCA 60.615 57.895 16.78 0.00 37.16 4.75
3521 5900 1.842562 CTGTTGGGATGGATCACCTCT 59.157 52.381 0.00 0.00 37.04 3.69
3724 6103 0.036010 CACAACTGCCGGGAGAAGAT 60.036 55.000 31.46 9.68 0.00 2.40
3739 6118 0.459237 AAGATGGCGAGCTCGAACAG 60.459 55.000 38.74 10.91 43.02 3.16
3828 6207 2.283966 AGAGACCGGGGTCACCAG 60.284 66.667 19.38 0.00 46.76 4.00
4189 6631 3.951680 GGGACTTGTTGAAACCTTCTTCA 59.048 43.478 0.00 0.00 33.48 3.02
4199 6641 1.742308 ACCTTCTTCACCTGGCCTAA 58.258 50.000 3.32 0.00 0.00 2.69
4209 6651 2.501723 CACCTGGCCTAACAGTGTAGAT 59.498 50.000 3.32 0.00 36.75 1.98
4211 6653 2.766263 CCTGGCCTAACAGTGTAGATGA 59.234 50.000 3.32 0.00 36.75 2.92
4219 6661 6.311690 GCCTAACAGTGTAGATGAAGAAGTTC 59.688 42.308 0.00 0.00 0.00 3.01
4233 6675 8.908786 ATGAAGAAGTTCTGTTTTCTGATACA 57.091 30.769 6.06 0.00 34.09 2.29
4235 6677 9.342308 TGAAGAAGTTCTGTTTTCTGATACATT 57.658 29.630 6.06 0.00 34.09 2.71
4242 6684 7.036996 TCTGTTTTCTGATACATTTGTTGCA 57.963 32.000 0.00 0.00 0.00 4.08
4270 6712 2.488545 GAGAGTGTAAAGAGCGGTCTGA 59.511 50.000 19.39 6.65 31.37 3.27
4277 6719 3.813529 AAAGAGCGGTCTGAATTTTCG 57.186 42.857 19.39 0.00 31.37 3.46
4283 6725 3.127030 AGCGGTCTGAATTTTCGGAATTC 59.873 43.478 14.40 14.40 43.67 2.17
4284 6726 3.730963 GCGGTCTGAATTTTCGGAATTCC 60.731 47.826 15.01 15.01 43.67 3.01
4304 6746 6.425210 TTCCATTTCTCAAGTCTGAAGAGA 57.575 37.500 0.00 0.00 36.68 3.10
4391 6833 2.370189 CTGAGTATCCATCCCTTGGTCC 59.630 54.545 0.00 0.00 46.52 4.46
4409 6851 2.165437 GTCCAAGAACAGGCAACAACAA 59.835 45.455 0.00 0.00 41.41 2.83
4412 6854 3.999663 CCAAGAACAGGCAACAACAAAAA 59.000 39.130 0.00 0.00 41.41 1.94
4455 6897 1.739035 CGCTTCCTGATTAGCCGAACA 60.739 52.381 0.00 0.00 33.86 3.18
4457 6899 1.927174 CTTCCTGATTAGCCGAACACG 59.073 52.381 0.00 0.00 0.00 4.49
4464 6906 4.558178 TGATTAGCCGAACACGTTTCTTA 58.442 39.130 0.00 0.00 0.00 2.10
4510 6952 6.016777 GCAATAGTTTGATGATCCAAGGTAGG 60.017 42.308 0.00 0.00 34.60 3.18
4518 6960 0.919710 ATCCAAGGTAGGCCAGTTCC 59.080 55.000 5.01 0.93 37.19 3.62
4519 6961 1.205460 TCCAAGGTAGGCCAGTTCCC 61.205 60.000 5.01 0.00 37.19 3.97
4520 6962 1.303282 CAAGGTAGGCCAGTTCCCC 59.697 63.158 5.01 0.00 37.19 4.81
4521 6963 1.163555 AAGGTAGGCCAGTTCCCCT 59.836 57.895 5.01 0.00 37.19 4.79
4522 6964 1.208165 AAGGTAGGCCAGTTCCCCTG 61.208 60.000 5.01 0.00 41.15 4.45
4523 6965 1.615424 GGTAGGCCAGTTCCCCTGA 60.615 63.158 5.01 0.00 44.49 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.469260 ACATAGACCGTACAAAATTTATGTGC 58.531 34.615 13.08 11.36 31.43 4.57
6 7 7.360269 CCGTGTAACATAGACCGTACAAAATTT 60.360 37.037 0.00 0.00 35.74 1.82
8 9 5.577945 CCGTGTAACATAGACCGTACAAAAT 59.422 40.000 0.00 0.00 35.74 1.82
11 12 3.505680 ACCGTGTAACATAGACCGTACAA 59.494 43.478 0.00 0.00 35.74 2.41
12 13 3.081061 ACCGTGTAACATAGACCGTACA 58.919 45.455 0.00 0.00 35.74 2.90
13 14 3.764885 ACCGTGTAACATAGACCGTAC 57.235 47.619 0.00 0.00 35.74 3.67
14 15 5.888691 TTTACCGTGTAACATAGACCGTA 57.111 39.130 0.00 0.00 35.74 4.02
15 16 4.782019 TTTACCGTGTAACATAGACCGT 57.218 40.909 0.00 0.00 35.74 4.83
16 17 7.935338 ATTATTTACCGTGTAACATAGACCG 57.065 36.000 0.00 0.00 35.74 4.79
17 18 9.101655 ACAATTATTTACCGTGTAACATAGACC 57.898 33.333 0.00 0.00 35.74 3.85
34 35 9.041354 TGCCCCTAACTGAATTTACAATTATTT 57.959 29.630 0.00 0.00 0.00 1.40
35 36 8.602472 TGCCCCTAACTGAATTTACAATTATT 57.398 30.769 0.00 0.00 0.00 1.40
36 37 8.602472 TTGCCCCTAACTGAATTTACAATTAT 57.398 30.769 0.00 0.00 0.00 1.28
37 38 7.123547 CCTTGCCCCTAACTGAATTTACAATTA 59.876 37.037 0.00 0.00 0.00 1.40
38 39 6.070824 CCTTGCCCCTAACTGAATTTACAATT 60.071 38.462 0.00 0.00 0.00 2.32
39 40 5.422012 CCTTGCCCCTAACTGAATTTACAAT 59.578 40.000 0.00 0.00 0.00 2.71
40 41 4.770010 CCTTGCCCCTAACTGAATTTACAA 59.230 41.667 0.00 0.00 0.00 2.41
41 42 4.202631 ACCTTGCCCCTAACTGAATTTACA 60.203 41.667 0.00 0.00 0.00 2.41
42 43 4.341487 ACCTTGCCCCTAACTGAATTTAC 58.659 43.478 0.00 0.00 0.00 2.01
43 44 4.668138 ACCTTGCCCCTAACTGAATTTA 57.332 40.909 0.00 0.00 0.00 1.40
44 45 3.542969 ACCTTGCCCCTAACTGAATTT 57.457 42.857 0.00 0.00 0.00 1.82
45 46 3.542969 AACCTTGCCCCTAACTGAATT 57.457 42.857 0.00 0.00 0.00 2.17
46 47 3.165071 CAAACCTTGCCCCTAACTGAAT 58.835 45.455 0.00 0.00 0.00 2.57
47 48 2.175931 TCAAACCTTGCCCCTAACTGAA 59.824 45.455 0.00 0.00 0.00 3.02
48 49 1.777878 TCAAACCTTGCCCCTAACTGA 59.222 47.619 0.00 0.00 0.00 3.41
49 50 2.286365 TCAAACCTTGCCCCTAACTG 57.714 50.000 0.00 0.00 0.00 3.16
50 51 2.378547 TGATCAAACCTTGCCCCTAACT 59.621 45.455 0.00 0.00 0.00 2.24
51 52 2.802719 TGATCAAACCTTGCCCCTAAC 58.197 47.619 0.00 0.00 0.00 2.34
52 53 3.534357 TTGATCAAACCTTGCCCCTAA 57.466 42.857 5.45 0.00 0.00 2.69
53 54 3.756082 ATTGATCAAACCTTGCCCCTA 57.244 42.857 13.09 0.00 0.00 3.53
54 55 2.629017 ATTGATCAAACCTTGCCCCT 57.371 45.000 13.09 0.00 0.00 4.79
55 56 3.701205 AAATTGATCAAACCTTGCCCC 57.299 42.857 13.09 0.00 0.00 5.80
56 57 5.985530 GCTATAAATTGATCAAACCTTGCCC 59.014 40.000 13.09 0.00 0.00 5.36
57 58 6.572519 TGCTATAAATTGATCAAACCTTGCC 58.427 36.000 13.09 0.55 0.00 4.52
58 59 8.477984 TTTGCTATAAATTGATCAAACCTTGC 57.522 30.769 13.09 12.73 0.00 4.01
61 62 9.995003 TGTTTTTGCTATAAATTGATCAAACCT 57.005 25.926 13.09 2.49 0.00 3.50
75 76 8.770828 GGTAGCTATTCGATTGTTTTTGCTATA 58.229 33.333 0.00 0.00 33.91 1.31
76 77 7.282224 TGGTAGCTATTCGATTGTTTTTGCTAT 59.718 33.333 0.00 0.00 33.91 2.97
77 78 6.596106 TGGTAGCTATTCGATTGTTTTTGCTA 59.404 34.615 0.00 0.00 0.00 3.49
78 79 5.414454 TGGTAGCTATTCGATTGTTTTTGCT 59.586 36.000 0.00 0.00 0.00 3.91
79 80 5.636837 TGGTAGCTATTCGATTGTTTTTGC 58.363 37.500 0.00 0.00 0.00 3.68
80 81 7.471721 TCATGGTAGCTATTCGATTGTTTTTG 58.528 34.615 0.00 0.00 0.00 2.44
81 82 7.624360 TCATGGTAGCTATTCGATTGTTTTT 57.376 32.000 0.00 0.00 0.00 1.94
82 83 7.498900 TCATCATGGTAGCTATTCGATTGTTTT 59.501 33.333 0.00 0.00 0.00 2.43
83 84 6.992123 TCATCATGGTAGCTATTCGATTGTTT 59.008 34.615 0.00 0.00 0.00 2.83
84 85 6.524734 TCATCATGGTAGCTATTCGATTGTT 58.475 36.000 0.00 0.00 0.00 2.83
85 86 6.101650 TCATCATGGTAGCTATTCGATTGT 57.898 37.500 0.00 0.00 0.00 2.71
86 87 6.815142 TGATCATCATGGTAGCTATTCGATTG 59.185 38.462 0.00 0.00 0.00 2.67
87 88 6.939622 TGATCATCATGGTAGCTATTCGATT 58.060 36.000 0.00 0.00 0.00 3.34
88 89 6.535963 TGATCATCATGGTAGCTATTCGAT 57.464 37.500 0.00 0.00 0.00 3.59
89 90 5.982890 TGATCATCATGGTAGCTATTCGA 57.017 39.130 0.00 0.00 0.00 3.71
90 91 6.592994 ACAATGATCATCATGGTAGCTATTCG 59.407 38.462 5.79 0.00 39.17 3.34
91 92 7.918536 ACAATGATCATCATGGTAGCTATTC 57.081 36.000 5.79 0.00 39.17 1.75
92 93 9.797642 TTAACAATGATCATCATGGTAGCTATT 57.202 29.630 8.18 0.00 40.01 1.73
93 94 9.797642 TTTAACAATGATCATCATGGTAGCTAT 57.202 29.630 8.18 0.00 40.01 2.97
94 95 9.625747 TTTTAACAATGATCATCATGGTAGCTA 57.374 29.630 8.18 0.00 40.01 3.32
95 96 8.523915 TTTTAACAATGATCATCATGGTAGCT 57.476 30.769 8.18 0.00 40.01 3.32
121 122 9.226606 TGATTACAATTCGGTGAAGTAGATTTT 57.773 29.630 0.00 0.00 0.00 1.82
122 123 8.786826 TGATTACAATTCGGTGAAGTAGATTT 57.213 30.769 0.00 0.00 0.00 2.17
123 124 7.011482 GCTGATTACAATTCGGTGAAGTAGATT 59.989 37.037 0.00 0.00 0.00 2.40
124 125 6.480320 GCTGATTACAATTCGGTGAAGTAGAT 59.520 38.462 0.00 0.00 0.00 1.98
125 126 5.810587 GCTGATTACAATTCGGTGAAGTAGA 59.189 40.000 0.00 0.00 0.00 2.59
126 127 5.580691 TGCTGATTACAATTCGGTGAAGTAG 59.419 40.000 0.00 0.00 0.00 2.57
127 128 5.483811 TGCTGATTACAATTCGGTGAAGTA 58.516 37.500 0.00 0.00 0.00 2.24
128 129 4.323417 TGCTGATTACAATTCGGTGAAGT 58.677 39.130 0.00 0.00 0.00 3.01
129 130 4.944962 TGCTGATTACAATTCGGTGAAG 57.055 40.909 0.00 0.00 0.00 3.02
130 131 5.697473 TTTGCTGATTACAATTCGGTGAA 57.303 34.783 0.00 0.00 0.00 3.18
131 132 5.697473 TTTTGCTGATTACAATTCGGTGA 57.303 34.783 0.00 0.00 0.00 4.02
132 133 6.949578 ATTTTTGCTGATTACAATTCGGTG 57.050 33.333 0.00 0.00 0.00 4.94
133 134 8.085296 TGTTATTTTTGCTGATTACAATTCGGT 58.915 29.630 0.00 0.00 0.00 4.69
134 135 8.459521 TGTTATTTTTGCTGATTACAATTCGG 57.540 30.769 0.00 0.00 0.00 4.30
135 136 9.128107 ACTGTTATTTTTGCTGATTACAATTCG 57.872 29.630 0.00 0.00 0.00 3.34
138 139 9.979578 TCAACTGTTATTTTTGCTGATTACAAT 57.020 25.926 0.00 0.00 0.00 2.71
139 140 9.979578 ATCAACTGTTATTTTTGCTGATTACAA 57.020 25.926 0.00 0.00 0.00 2.41
140 141 9.979578 AATCAACTGTTATTTTTGCTGATTACA 57.020 25.926 0.00 0.00 32.11 2.41
143 144 9.545105 TCAAATCAACTGTTATTTTTGCTGATT 57.455 25.926 13.06 5.44 34.58 2.57
144 145 9.715121 ATCAAATCAACTGTTATTTTTGCTGAT 57.285 25.926 13.06 8.02 0.00 2.90
145 146 9.195411 GATCAAATCAACTGTTATTTTTGCTGA 57.805 29.630 13.06 6.74 0.00 4.26
146 147 8.157813 CGATCAAATCAACTGTTATTTTTGCTG 58.842 33.333 13.06 5.88 0.00 4.41
147 148 7.867403 ACGATCAAATCAACTGTTATTTTTGCT 59.133 29.630 13.06 7.24 0.00 3.91
148 149 8.006741 ACGATCAAATCAACTGTTATTTTTGC 57.993 30.769 13.06 0.00 0.00 3.68
149 150 9.782028 CAACGATCAAATCAACTGTTATTTTTG 57.218 29.630 12.24 12.24 0.00 2.44
150 151 9.528018 ACAACGATCAAATCAACTGTTATTTTT 57.472 25.926 0.00 0.00 0.00 1.94
151 152 8.967218 CACAACGATCAAATCAACTGTTATTTT 58.033 29.630 0.00 0.00 0.00 1.82
152 153 7.594758 CCACAACGATCAAATCAACTGTTATTT 59.405 33.333 0.00 0.00 0.00 1.40
153 154 7.083858 CCACAACGATCAAATCAACTGTTATT 58.916 34.615 0.00 0.00 0.00 1.40
154 155 6.349280 CCCACAACGATCAAATCAACTGTTAT 60.349 38.462 0.00 0.00 0.00 1.89
155 156 5.049060 CCCACAACGATCAAATCAACTGTTA 60.049 40.000 0.00 0.00 0.00 2.41
156 157 4.261572 CCCACAACGATCAAATCAACTGTT 60.262 41.667 0.00 0.00 0.00 3.16
157 158 3.253188 CCCACAACGATCAAATCAACTGT 59.747 43.478 0.00 0.00 0.00 3.55
158 159 3.825308 CCCACAACGATCAAATCAACTG 58.175 45.455 0.00 0.00 0.00 3.16
159 160 2.228822 GCCCACAACGATCAAATCAACT 59.771 45.455 0.00 0.00 0.00 3.16
160 161 2.228822 AGCCCACAACGATCAAATCAAC 59.771 45.455 0.00 0.00 0.00 3.18
161 162 2.513753 AGCCCACAACGATCAAATCAA 58.486 42.857 0.00 0.00 0.00 2.57
162 163 2.198827 AGCCCACAACGATCAAATCA 57.801 45.000 0.00 0.00 0.00 2.57
163 164 3.063997 CAGTAGCCCACAACGATCAAATC 59.936 47.826 0.00 0.00 0.00 2.17
164 165 3.009723 CAGTAGCCCACAACGATCAAAT 58.990 45.455 0.00 0.00 0.00 2.32
165 166 2.224426 ACAGTAGCCCACAACGATCAAA 60.224 45.455 0.00 0.00 0.00 2.69
166 167 1.346395 ACAGTAGCCCACAACGATCAA 59.654 47.619 0.00 0.00 0.00 2.57
198 199 6.055588 AGACAAAAGAATTCGTGGAGAAGAA 58.944 36.000 0.00 0.00 42.92 2.52
200 201 5.931441 AGACAAAAGAATTCGTGGAGAAG 57.069 39.130 0.00 0.00 42.92 2.85
262 265 1.014352 CCGGAACCCATTAGCTTTCG 58.986 55.000 0.00 0.00 0.00 3.46
378 409 2.761160 GTGTTCGGGGGTGGGAAT 59.239 61.111 0.00 0.00 0.00 3.01
599 634 5.046288 AGACTGGATCCATGAAATCTTCC 57.954 43.478 16.63 0.00 0.00 3.46
638 673 1.274167 ACCAAAATACGACAGGAGCGA 59.726 47.619 0.00 0.00 0.00 4.93
723 758 0.531532 GATCATCCTGGACAGTGGCG 60.532 60.000 0.00 0.00 0.00 5.69
724 759 0.835941 AGATCATCCTGGACAGTGGC 59.164 55.000 0.00 0.00 0.00 5.01
725 760 2.915349 CAAGATCATCCTGGACAGTGG 58.085 52.381 0.00 0.00 0.00 4.00
726 761 2.093075 AGCAAGATCATCCTGGACAGTG 60.093 50.000 0.00 0.00 0.00 3.66
727 762 2.194859 AGCAAGATCATCCTGGACAGT 58.805 47.619 0.00 0.00 0.00 3.55
728 763 2.943690 CAAGCAAGATCATCCTGGACAG 59.056 50.000 0.00 0.00 0.00 3.51
729 764 2.306805 ACAAGCAAGATCATCCTGGACA 59.693 45.455 0.00 0.00 0.00 4.02
730 765 2.996631 ACAAGCAAGATCATCCTGGAC 58.003 47.619 0.00 0.00 0.00 4.02
731 766 3.118261 GGTACAAGCAAGATCATCCTGGA 60.118 47.826 0.00 0.00 0.00 3.86
732 767 3.118112 AGGTACAAGCAAGATCATCCTGG 60.118 47.826 0.00 0.00 0.00 4.45
733 768 4.125703 GAGGTACAAGCAAGATCATCCTG 58.874 47.826 0.00 0.00 0.00 3.86
734 769 3.776969 TGAGGTACAAGCAAGATCATCCT 59.223 43.478 0.00 0.00 0.00 3.24
735 770 4.125703 CTGAGGTACAAGCAAGATCATCC 58.874 47.826 0.00 0.00 0.00 3.51
736 771 3.559242 GCTGAGGTACAAGCAAGATCATC 59.441 47.826 8.97 0.00 0.00 2.92
737 772 3.199508 AGCTGAGGTACAAGCAAGATCAT 59.800 43.478 14.54 0.00 0.00 2.45
738 773 2.568956 AGCTGAGGTACAAGCAAGATCA 59.431 45.455 14.54 0.00 0.00 2.92
739 774 3.194062 GAGCTGAGGTACAAGCAAGATC 58.806 50.000 14.54 1.31 0.00 2.75
740 775 2.093235 GGAGCTGAGGTACAAGCAAGAT 60.093 50.000 14.54 0.00 0.00 2.40
741 776 1.276421 GGAGCTGAGGTACAAGCAAGA 59.724 52.381 14.54 0.00 0.00 3.02
742 777 1.002430 TGGAGCTGAGGTACAAGCAAG 59.998 52.381 14.54 0.00 0.00 4.01
772 831 6.126768 CCCTGGGAATAAGTGATACTCAAAGA 60.127 42.308 7.01 0.00 0.00 2.52
773 832 6.058183 CCCTGGGAATAAGTGATACTCAAAG 58.942 44.000 7.01 0.00 0.00 2.77
780 839 6.126594 CCAAACTACCCTGGGAATAAGTGATA 60.127 42.308 22.23 0.00 0.00 2.15
792 851 2.158519 AGAACCAACCAAACTACCCTGG 60.159 50.000 0.00 0.00 38.77 4.45
798 857 6.134535 ACCATATGAGAACCAACCAAACTA 57.865 37.500 3.65 0.00 0.00 2.24
877 937 1.537638 CTCTGCAGTCTACACACGACT 59.462 52.381 14.67 0.00 42.17 4.18
893 953 5.848406 ACAAACCTTCAGTAAGACTCTCTG 58.152 41.667 0.00 1.78 34.37 3.35
930 1001 1.836604 AATGCAAGGCCCCGTGTTT 60.837 52.632 0.00 0.00 0.00 2.83
937 1008 2.414594 GATCGCAATGCAAGGCCC 59.585 61.111 5.91 0.00 0.00 5.80
1102 1173 4.614535 GCACACAAAGATTAGGTTGAGCAG 60.615 45.833 0.00 0.00 0.00 4.24
1111 1182 5.412594 ACACACATAGGCACACAAAGATTAG 59.587 40.000 0.00 0.00 0.00 1.73
1171 1242 1.009675 GCAAATCGCATTCGCCGAT 60.010 52.632 0.00 0.00 46.35 4.18
1321 1398 1.313091 GGGGCTTCTTTTAGGTGCCG 61.313 60.000 0.00 0.00 44.07 5.69
1326 1403 5.480422 ACAATTAACTGGGGCTTCTTTTAGG 59.520 40.000 0.00 0.00 0.00 2.69
1342 1419 8.996271 GGTAGTAGTATATTGGGCACAATTAAC 58.004 37.037 21.35 17.45 44.69 2.01
1392 1469 9.961265 CGTATGTAGATTGTACTGAAATCCTAA 57.039 33.333 0.00 0.00 35.09 2.69
1393 1470 8.573885 CCGTATGTAGATTGTACTGAAATCCTA 58.426 37.037 0.00 0.00 35.09 2.94
1394 1471 7.287005 TCCGTATGTAGATTGTACTGAAATCCT 59.713 37.037 0.00 0.00 35.09 3.24
1395 1472 7.431249 TCCGTATGTAGATTGTACTGAAATCC 58.569 38.462 0.00 0.00 35.09 3.01
1396 1473 8.916654 CATCCGTATGTAGATTGTACTGAAATC 58.083 37.037 0.00 0.00 34.80 2.17
1397 1474 8.421784 ACATCCGTATGTAGATTGTACTGAAAT 58.578 33.333 0.00 0.00 44.66 2.17
1398 1475 7.778083 ACATCCGTATGTAGATTGTACTGAAA 58.222 34.615 0.00 0.00 44.66 2.69
1399 1476 7.342769 ACATCCGTATGTAGATTGTACTGAA 57.657 36.000 0.00 0.00 44.66 3.02
1400 1477 6.954487 ACATCCGTATGTAGATTGTACTGA 57.046 37.500 0.00 0.00 44.66 3.41
1438 1515 9.832445 GAACAAAATGAGTGAATCTATACCCTA 57.168 33.333 0.00 0.00 0.00 3.53
1439 1516 7.775561 GGAACAAAATGAGTGAATCTATACCCT 59.224 37.037 0.00 0.00 0.00 4.34
1440 1517 7.254795 CGGAACAAAATGAGTGAATCTATACCC 60.255 40.741 0.00 0.00 0.00 3.69
1441 1518 7.280205 ACGGAACAAAATGAGTGAATCTATACC 59.720 37.037 0.00 0.00 0.00 2.73
1442 1519 8.197988 ACGGAACAAAATGAGTGAATCTATAC 57.802 34.615 0.00 0.00 0.00 1.47
1444 1521 8.830580 CATACGGAACAAAATGAGTGAATCTAT 58.169 33.333 0.00 0.00 0.00 1.98
1445 1522 7.822334 ACATACGGAACAAAATGAGTGAATCTA 59.178 33.333 0.00 0.00 0.00 1.98
1446 1523 6.655003 ACATACGGAACAAAATGAGTGAATCT 59.345 34.615 0.00 0.00 0.00 2.40
1447 1524 6.842163 ACATACGGAACAAAATGAGTGAATC 58.158 36.000 0.00 0.00 0.00 2.52
1448 1525 6.817765 ACATACGGAACAAAATGAGTGAAT 57.182 33.333 0.00 0.00 0.00 2.57
1449 1526 6.932400 ACTACATACGGAACAAAATGAGTGAA 59.068 34.615 0.00 0.00 0.00 3.18
1450 1527 6.460781 ACTACATACGGAACAAAATGAGTGA 58.539 36.000 0.00 0.00 0.00 3.41
1451 1528 6.183360 GGACTACATACGGAACAAAATGAGTG 60.183 42.308 0.00 0.00 0.00 3.51
1452 1529 5.873164 GGACTACATACGGAACAAAATGAGT 59.127 40.000 0.00 0.00 0.00 3.41
1453 1530 5.293569 GGGACTACATACGGAACAAAATGAG 59.706 44.000 0.00 0.00 0.00 2.90
1454 1531 5.046159 AGGGACTACATACGGAACAAAATGA 60.046 40.000 0.00 0.00 36.02 2.57
1455 1532 5.183228 AGGGACTACATACGGAACAAAATG 58.817 41.667 0.00 0.00 36.02 2.32
1456 1533 5.431179 AGGGACTACATACGGAACAAAAT 57.569 39.130 0.00 0.00 36.02 1.82
1457 1534 4.895668 AGGGACTACATACGGAACAAAA 57.104 40.909 0.00 0.00 36.02 2.44
1458 1535 4.895668 AAGGGACTACATACGGAACAAA 57.104 40.909 0.00 0.00 38.49 2.83
1459 1536 6.342906 CAATAAGGGACTACATACGGAACAA 58.657 40.000 0.00 0.00 38.49 2.83
1460 1537 5.163385 CCAATAAGGGACTACATACGGAACA 60.163 44.000 0.00 0.00 38.49 3.18
1461 1538 5.069516 TCCAATAAGGGACTACATACGGAAC 59.930 44.000 0.00 0.00 38.49 3.62
1462 1539 5.210430 TCCAATAAGGGACTACATACGGAA 58.790 41.667 0.00 0.00 38.49 4.30
1463 1540 4.806892 TCCAATAAGGGACTACATACGGA 58.193 43.478 0.00 0.00 38.49 4.69
1464 1541 5.540400 TTCCAATAAGGGACTACATACGG 57.460 43.478 0.00 0.00 38.49 4.02
1465 1542 6.994221 AGATTCCAATAAGGGACTACATACG 58.006 40.000 0.00 0.00 38.49 3.06
1466 1543 8.196378 AGAGATTCCAATAAGGGACTACATAC 57.804 38.462 0.00 0.00 38.49 2.39
1467 1544 9.892444 TTAGAGATTCCAATAAGGGACTACATA 57.108 33.333 0.00 0.00 38.49 2.29
1468 1545 8.798975 TTAGAGATTCCAATAAGGGACTACAT 57.201 34.615 0.00 0.00 38.49 2.29
1469 1546 8.618240 TTTAGAGATTCCAATAAGGGACTACA 57.382 34.615 0.00 0.00 38.49 2.74
1470 1547 9.901172 TTTTTAGAGATTCCAATAAGGGACTAC 57.099 33.333 0.00 0.00 38.49 2.73
1473 1550 8.809468 ACTTTTTAGAGATTCCAATAAGGGAC 57.191 34.615 0.00 0.00 36.46 4.46
1474 1551 8.836735 AGACTTTTTAGAGATTCCAATAAGGGA 58.163 33.333 0.00 0.00 38.24 4.20
1475 1552 9.467796 AAGACTTTTTAGAGATTCCAATAAGGG 57.532 33.333 0.00 0.00 38.24 3.95
1483 1560 9.767228 GGGAGTATAAGACTTTTTAGAGATTCC 57.233 37.037 0.00 0.00 39.06 3.01
1486 1563 9.150028 GGAGGGAGTATAAGACTTTTTAGAGAT 57.850 37.037 0.00 0.00 39.06 2.75
1487 1564 7.284944 CGGAGGGAGTATAAGACTTTTTAGAGA 59.715 40.741 0.00 0.00 39.06 3.10
1488 1565 7.068470 ACGGAGGGAGTATAAGACTTTTTAGAG 59.932 40.741 0.00 0.00 39.06 2.43
1489 1566 6.894103 ACGGAGGGAGTATAAGACTTTTTAGA 59.106 38.462 0.00 0.00 39.06 2.10
1490 1567 7.110043 ACGGAGGGAGTATAAGACTTTTTAG 57.890 40.000 0.00 0.00 39.06 1.85
1491 1568 6.097412 GGACGGAGGGAGTATAAGACTTTTTA 59.903 42.308 0.00 0.00 39.06 1.52
1492 1569 5.105023 GGACGGAGGGAGTATAAGACTTTTT 60.105 44.000 0.00 0.00 39.06 1.94
1493 1570 4.405036 GGACGGAGGGAGTATAAGACTTTT 59.595 45.833 0.00 0.00 39.06 2.27
1494 1571 3.959449 GGACGGAGGGAGTATAAGACTTT 59.041 47.826 0.00 0.00 39.06 2.66
1495 1572 3.564264 GGACGGAGGGAGTATAAGACTT 58.436 50.000 0.00 0.00 39.06 3.01
1496 1573 2.486907 CGGACGGAGGGAGTATAAGACT 60.487 54.545 0.00 0.00 42.90 3.24
1497 1574 1.878734 CGGACGGAGGGAGTATAAGAC 59.121 57.143 0.00 0.00 0.00 3.01
1498 1575 1.202855 CCGGACGGAGGGAGTATAAGA 60.203 57.143 4.40 0.00 37.50 2.10
1499 1576 1.202855 TCCGGACGGAGGGAGTATAAG 60.203 57.143 9.76 0.00 39.76 1.73
1500 1577 0.846015 TCCGGACGGAGGGAGTATAA 59.154 55.000 9.76 0.00 39.76 0.98
1501 1578 0.846015 TTCCGGACGGAGGGAGTATA 59.154 55.000 13.64 0.00 46.06 1.47
1502 1579 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12
1503 1580 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
1504 1581 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
1505 1582 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
1506 1583 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
1507 1584 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
1508 1585 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
1509 1586 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
1510 1587 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
1511 1588 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
1512 1589 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
1513 1590 2.165030 TCTCCGACAAGTATTTCCGGAC 59.835 50.000 1.83 0.00 43.47 4.79
1514 1591 2.449464 TCTCCGACAAGTATTTCCGGA 58.551 47.619 0.00 0.00 45.74 5.14
1515 1592 2.953466 TCTCCGACAAGTATTTCCGG 57.047 50.000 0.00 0.00 41.36 5.14
1516 1593 4.494199 GCATTTCTCCGACAAGTATTTCCG 60.494 45.833 0.00 0.00 0.00 4.30
1517 1594 4.394920 TGCATTTCTCCGACAAGTATTTCC 59.605 41.667 0.00 0.00 0.00 3.13
1518 1595 5.545658 TGCATTTCTCCGACAAGTATTTC 57.454 39.130 0.00 0.00 0.00 2.17
1519 1596 7.624360 TTATGCATTTCTCCGACAAGTATTT 57.376 32.000 3.54 0.00 0.00 1.40
1520 1597 7.624360 TTTATGCATTTCTCCGACAAGTATT 57.376 32.000 3.54 0.00 0.00 1.89
1521 1598 7.336931 ACTTTTATGCATTTCTCCGACAAGTAT 59.663 33.333 3.54 0.00 0.00 2.12
1522 1599 6.653320 ACTTTTATGCATTTCTCCGACAAGTA 59.347 34.615 3.54 0.00 0.00 2.24
1523 1600 5.473504 ACTTTTATGCATTTCTCCGACAAGT 59.526 36.000 3.54 0.00 0.00 3.16
1524 1601 5.796935 CACTTTTATGCATTTCTCCGACAAG 59.203 40.000 3.54 0.00 0.00 3.16
1525 1602 5.471797 TCACTTTTATGCATTTCTCCGACAA 59.528 36.000 3.54 0.00 0.00 3.18
1526 1603 5.000591 TCACTTTTATGCATTTCTCCGACA 58.999 37.500 3.54 0.00 0.00 4.35
1527 1604 5.545658 TCACTTTTATGCATTTCTCCGAC 57.454 39.130 3.54 0.00 0.00 4.79
1528 1605 6.150976 ACATTCACTTTTATGCATTTCTCCGA 59.849 34.615 3.54 0.00 0.00 4.55
1529 1606 6.324819 ACATTCACTTTTATGCATTTCTCCG 58.675 36.000 3.54 0.00 0.00 4.63
1530 1607 9.455847 GATACATTCACTTTTATGCATTTCTCC 57.544 33.333 3.54 0.00 0.00 3.71
1537 1614 9.890629 AGTTCTAGATACATTCACTTTTATGCA 57.109 29.630 0.00 0.00 0.00 3.96
1566 1643 8.986991 GGAGGAATGGATGTATCTAGACATATT 58.013 37.037 0.00 0.00 40.18 1.28
1567 1644 7.286546 CGGAGGAATGGATGTATCTAGACATAT 59.713 40.741 0.00 0.00 40.18 1.78
1568 1645 6.603599 CGGAGGAATGGATGTATCTAGACATA 59.396 42.308 0.00 0.00 40.18 2.29
1569 1646 5.420421 CGGAGGAATGGATGTATCTAGACAT 59.580 44.000 0.00 0.00 42.82 3.06
1570 1647 4.767409 CGGAGGAATGGATGTATCTAGACA 59.233 45.833 0.00 0.00 0.00 3.41
1571 1648 5.010933 TCGGAGGAATGGATGTATCTAGAC 58.989 45.833 0.00 0.00 0.00 2.59
1572 1649 5.010933 GTCGGAGGAATGGATGTATCTAGA 58.989 45.833 0.00 0.00 0.00 2.43
1573 1650 4.767409 TGTCGGAGGAATGGATGTATCTAG 59.233 45.833 0.00 0.00 0.00 2.43
1574 1651 4.736473 TGTCGGAGGAATGGATGTATCTA 58.264 43.478 0.00 0.00 0.00 1.98
1575 1652 3.576861 TGTCGGAGGAATGGATGTATCT 58.423 45.455 0.00 0.00 0.00 1.98
1576 1653 4.202264 ACTTGTCGGAGGAATGGATGTATC 60.202 45.833 0.00 0.00 0.00 2.24
1577 1654 3.711704 ACTTGTCGGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 0.00 2.29
1578 1655 3.104512 ACTTGTCGGAGGAATGGATGTA 58.895 45.455 0.00 0.00 0.00 2.29
1579 1656 1.909302 ACTTGTCGGAGGAATGGATGT 59.091 47.619 0.00 0.00 0.00 3.06
1580 1657 2.698855 ACTTGTCGGAGGAATGGATG 57.301 50.000 0.00 0.00 0.00 3.51
1581 1658 5.131142 AGAAATACTTGTCGGAGGAATGGAT 59.869 40.000 0.00 0.00 0.00 3.41
1582 1659 4.469945 AGAAATACTTGTCGGAGGAATGGA 59.530 41.667 0.00 0.00 0.00 3.41
1583 1660 4.572389 CAGAAATACTTGTCGGAGGAATGG 59.428 45.833 0.00 0.00 0.00 3.16
1584 1661 4.572389 CCAGAAATACTTGTCGGAGGAATG 59.428 45.833 0.00 0.00 0.00 2.67
1585 1662 4.469945 TCCAGAAATACTTGTCGGAGGAAT 59.530 41.667 0.00 0.00 0.00 3.01
1586 1663 3.835978 TCCAGAAATACTTGTCGGAGGAA 59.164 43.478 0.00 0.00 0.00 3.36
1587 1664 3.194968 GTCCAGAAATACTTGTCGGAGGA 59.805 47.826 0.00 0.00 0.00 3.71
1588 1665 3.522553 GTCCAGAAATACTTGTCGGAGG 58.477 50.000 0.00 0.00 0.00 4.30
1589 1666 3.179830 CGTCCAGAAATACTTGTCGGAG 58.820 50.000 0.00 0.00 0.00 4.63
1590 1667 2.094390 CCGTCCAGAAATACTTGTCGGA 60.094 50.000 0.00 0.00 42.19 4.55
1591 1668 2.094390 TCCGTCCAGAAATACTTGTCGG 60.094 50.000 0.00 0.00 41.47 4.79
1592 1669 3.179830 CTCCGTCCAGAAATACTTGTCG 58.820 50.000 0.00 0.00 0.00 4.35
1593 1670 3.522553 CCTCCGTCCAGAAATACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
1594 1671 2.236395 CCCTCCGTCCAGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
1595 1672 2.500098 TCCCTCCGTCCAGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
1596 1673 2.766828 CTCCCTCCGTCCAGAAATACTT 59.233 50.000 0.00 0.00 0.00 2.24
1597 1674 2.292323 ACTCCCTCCGTCCAGAAATACT 60.292 50.000 0.00 0.00 0.00 2.12
1598 1675 2.108970 ACTCCCTCCGTCCAGAAATAC 58.891 52.381 0.00 0.00 0.00 1.89
1599 1676 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
1600 1677 2.544844 TACTCCCTCCGTCCAGAAAT 57.455 50.000 0.00 0.00 0.00 2.17
1601 1678 2.544844 ATACTCCCTCCGTCCAGAAA 57.455 50.000 0.00 0.00 0.00 2.52
1602 1679 2.544844 AATACTCCCTCCGTCCAGAA 57.455 50.000 0.00 0.00 0.00 3.02
1603 1680 2.544844 AAATACTCCCTCCGTCCAGA 57.455 50.000 0.00 0.00 0.00 3.86
1604 1681 2.628657 CCTAAATACTCCCTCCGTCCAG 59.371 54.545 0.00 0.00 0.00 3.86
1605 1682 2.245546 TCCTAAATACTCCCTCCGTCCA 59.754 50.000 0.00 0.00 0.00 4.02
1606 1683 2.954792 TCCTAAATACTCCCTCCGTCC 58.045 52.381 0.00 0.00 0.00 4.79
1607 1684 3.703052 TGTTCCTAAATACTCCCTCCGTC 59.297 47.826 0.00 0.00 0.00 4.79
1608 1685 3.705072 CTGTTCCTAAATACTCCCTCCGT 59.295 47.826 0.00 0.00 0.00 4.69
1609 1686 3.958798 TCTGTTCCTAAATACTCCCTCCG 59.041 47.826 0.00 0.00 0.00 4.63
1610 1687 4.345547 CCTCTGTTCCTAAATACTCCCTCC 59.654 50.000 0.00 0.00 0.00 4.30
1611 1688 4.345547 CCCTCTGTTCCTAAATACTCCCTC 59.654 50.000 0.00 0.00 0.00 4.30
1612 1689 4.015541 TCCCTCTGTTCCTAAATACTCCCT 60.016 45.833 0.00 0.00 0.00 4.20
1613 1690 4.296056 TCCCTCTGTTCCTAAATACTCCC 58.704 47.826 0.00 0.00 0.00 4.30
1614 1691 4.963628 ACTCCCTCTGTTCCTAAATACTCC 59.036 45.833 0.00 0.00 0.00 3.85
1615 1692 7.842887 ATACTCCCTCTGTTCCTAAATACTC 57.157 40.000 0.00 0.00 0.00 2.59
1616 1693 9.900112 ATAATACTCCCTCTGTTCCTAAATACT 57.100 33.333 0.00 0.00 0.00 2.12
1619 1696 9.225682 TGAATAATACTCCCTCTGTTCCTAAAT 57.774 33.333 0.00 0.00 0.00 1.40
1620 1697 8.618240 TGAATAATACTCCCTCTGTTCCTAAA 57.382 34.615 0.00 0.00 0.00 1.85
1621 1698 8.483758 GTTGAATAATACTCCCTCTGTTCCTAA 58.516 37.037 0.00 0.00 0.00 2.69
1622 1699 7.844779 AGTTGAATAATACTCCCTCTGTTCCTA 59.155 37.037 0.00 0.00 0.00 2.94
1623 1700 6.674419 AGTTGAATAATACTCCCTCTGTTCCT 59.326 38.462 0.00 0.00 0.00 3.36
1624 1701 6.890293 AGTTGAATAATACTCCCTCTGTTCC 58.110 40.000 0.00 0.00 0.00 3.62
1780 1864 3.057033 TCTGTAGTAGGTTTCGAAGCACC 60.057 47.826 14.20 12.28 0.00 5.01
1787 1871 3.064545 CGGTACCTCTGTAGTAGGTTTCG 59.935 52.174 10.90 2.00 45.26 3.46
2075 2281 7.442656 CCAGTAAGGTGTAGAATATGGTAAGG 58.557 42.308 0.00 0.00 0.00 2.69
2284 2511 5.944007 GGATACCTTGACTTAGCCTTTTGAA 59.056 40.000 0.00 0.00 0.00 2.69
2306 2537 0.599204 GTGACGACAGAAAAGGCGGA 60.599 55.000 0.00 0.00 0.00 5.54
2347 2579 5.121611 CGTTCATCTGTAAAAGGCACATACA 59.878 40.000 0.00 0.00 0.00 2.29
2575 4849 2.678336 CGCTTCCTCCAGTTTACCAATC 59.322 50.000 0.00 0.00 0.00 2.67
2602 4912 2.861462 TCAAACCTTCAAACTTGCCG 57.139 45.000 0.00 0.00 0.00 5.69
2662 4978 1.153147 GGCTTCATCGACCCCCTTC 60.153 63.158 0.00 0.00 0.00 3.46
2723 5039 4.418337 CGATGCCGCACTCACATA 57.582 55.556 0.00 0.00 0.00 2.29
2769 5102 6.546034 AGGTTAACAACAGAAGCAGTTATTGT 59.454 34.615 8.10 0.00 31.82 2.71
2779 5116 9.931210 CAAAACTTACTAGGTTAACAACAGAAG 57.069 33.333 8.10 7.45 28.99 2.85
2914 5273 2.671963 GAAAGGGACGCCGGCTTT 60.672 61.111 26.68 17.75 0.00 3.51
3114 5475 2.719739 CCATCCATCTCAACAAGCAGT 58.280 47.619 0.00 0.00 0.00 4.40
3162 5523 2.954753 GAGGTTGGTTGCTGCGACG 61.955 63.158 13.57 0.00 0.00 5.12
3207 5568 2.197324 TCAAAACGCCCAGGCCTT 59.803 55.556 0.00 0.00 37.98 4.35
3521 5900 3.093814 TGATCTTGTCCTTGGCGTACTA 58.906 45.455 0.00 0.00 0.00 1.82
3691 6070 1.032014 GTTGTGTCACCATGCCAAGT 58.968 50.000 0.00 0.00 0.00 3.16
3724 6103 2.258591 GACTGTTCGAGCTCGCCA 59.741 61.111 30.97 25.53 39.60 5.69
3803 6182 0.115745 ACCCCGGTCTCTCCAACTAA 59.884 55.000 0.00 0.00 35.57 2.24
3828 6207 2.110006 GATCAGAGAAGGGGCCGC 59.890 66.667 12.88 12.88 0.00 6.53
4189 6631 2.320681 TCTACACTGTTAGGCCAGGT 57.679 50.000 5.01 0.00 36.75 4.00
4199 6641 6.412362 ACAGAACTTCTTCATCTACACTGT 57.588 37.500 0.00 0.00 0.00 3.55
4209 6651 8.908786 ATGTATCAGAAAACAGAACTTCTTCA 57.091 30.769 0.00 0.00 29.29 3.02
4211 6653 9.956720 CAAATGTATCAGAAAACAGAACTTCTT 57.043 29.630 0.00 0.00 29.29 2.52
4219 6661 7.620600 GCATGCAACAAATGTATCAGAAAACAG 60.621 37.037 14.21 0.00 31.29 3.16
4233 6675 2.889045 ACTCTCTGTGCATGCAACAAAT 59.111 40.909 24.58 1.91 0.00 2.32
4235 6677 1.605232 CACTCTCTGTGCATGCAACAA 59.395 47.619 24.58 10.41 40.06 2.83
4270 6712 7.670364 ACTTGAGAAATGGAATTCCGAAAATT 58.330 30.769 19.57 10.56 33.67 1.82
4277 6719 6.656693 TCTTCAGACTTGAGAAATGGAATTCC 59.343 38.462 18.17 18.17 32.08 3.01
4283 6725 5.638657 CACTCTCTTCAGACTTGAGAAATGG 59.361 44.000 0.00 0.00 36.56 3.16
4284 6726 6.222389 ACACTCTCTTCAGACTTGAGAAATG 58.778 40.000 0.00 0.00 36.56 2.32
4304 6746 4.379652 GTTTGATTGATTTGGGCAACACT 58.620 39.130 0.00 0.00 39.74 3.55
4391 6833 5.799681 ATTTTTGTTGTTGCCTGTTCTTG 57.200 34.783 0.00 0.00 0.00 3.02
4409 6851 7.180322 TGCCACAAATACATGGTGATATTTT 57.820 32.000 0.00 0.00 38.34 1.82
4412 6854 5.181811 CGATGCCACAAATACATGGTGATAT 59.818 40.000 0.00 0.00 38.34 1.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.