Multiple sequence alignment - TraesCS5D01G517900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G517900 chr5D 100.000 4783 0 0 1 4783 539677285 539672503 0.000000e+00 8833.0
1 TraesCS5D01G517900 chr5D 83.375 806 120 7 1 804 414239040 414239833 0.000000e+00 734.0
2 TraesCS5D01G517900 chr5D 86.595 373 29 11 4428 4783 96337000 96337368 4.490000e-105 392.0
3 TraesCS5D01G517900 chr5D 84.596 396 30 16 4413 4783 513015828 513016217 9.780000e-97 364.0
4 TraesCS5D01G517900 chr5D 79.503 161 10 9 4428 4566 489245572 489245731 5.100000e-15 93.5
5 TraesCS5D01G517900 chr5D 88.710 62 7 0 2777 2838 408336961 408337022 5.130000e-10 76.8
6 TraesCS5D01G517900 chr4A 92.116 1002 32 15 979 1942 628848458 628849450 0.000000e+00 1369.0
7 TraesCS5D01G517900 chr4A 89.390 688 53 7 1963 2646 628849433 628850104 0.000000e+00 848.0
8 TraesCS5D01G517900 chr4A 87.290 535 36 10 3117 3630 628850643 628851166 2.480000e-162 582.0
9 TraesCS5D01G517900 chr4A 89.831 295 18 2 4145 4427 628852759 628853053 7.560000e-98 368.0
10 TraesCS5D01G517900 chr4A 82.791 430 49 8 2647 3056 628850222 628850646 1.270000e-95 361.0
11 TraesCS5D01G517900 chr4A 82.065 368 36 21 4426 4781 688567579 688567928 2.180000e-73 287.0
12 TraesCS5D01G517900 chr4A 78.431 408 59 22 1996 2377 595283373 595282969 6.190000e-59 239.0
13 TraesCS5D01G517900 chr4A 95.745 94 4 0 1783 1876 595283550 595283457 8.290000e-33 152.0
14 TraesCS5D01G517900 chr4A 79.904 209 31 5 714 920 693165664 693165465 4.990000e-30 143.0
15 TraesCS5D01G517900 chr4A 80.745 161 9 10 4426 4566 693235101 693234943 6.550000e-19 106.0
16 TraesCS5D01G517900 chr5B 95.581 792 24 6 1162 1942 681618426 681617635 0.000000e+00 1258.0
17 TraesCS5D01G517900 chr5B 92.697 890 35 10 1064 1942 681345010 681344140 0.000000e+00 1256.0
18 TraesCS5D01G517900 chr5B 86.474 1109 96 21 1963 3051 681617652 681616578 0.000000e+00 1168.0
19 TraesCS5D01G517900 chr5B 88.370 920 89 9 3212 4123 681343131 681342222 0.000000e+00 1090.0
20 TraesCS5D01G517900 chr5B 89.286 644 40 9 1963 2606 681344157 681343543 0.000000e+00 780.0
21 TraesCS5D01G517900 chr5B 87.160 514 38 10 3117 3613 681616575 681616073 4.180000e-155 558.0
22 TraesCS5D01G517900 chr5B 94.077 287 15 2 4496 4782 524536805 524537089 7.350000e-118 435.0
23 TraesCS5D01G517900 chr5B 91.003 289 16 2 4148 4427 681342102 681341815 9.710000e-102 381.0
24 TraesCS5D01G517900 chr5B 88.768 276 19 3 4145 4408 681614006 681613731 1.280000e-85 327.0
25 TraesCS5D01G517900 chr5B 85.551 263 35 3 2653 2914 681343546 681343286 6.100000e-69 272.0
26 TraesCS5D01G517900 chr5B 82.155 297 46 4 1354 1643 681737610 681737906 1.030000e-61 248.0
27 TraesCS5D01G517900 chr5B 95.139 144 7 0 917 1060 681618609 681618466 1.340000e-55 228.0
28 TraesCS5D01G517900 chr5B 94.444 144 8 0 917 1060 681345264 681345121 6.230000e-54 222.0
29 TraesCS5D01G517900 chr5B 87.023 131 16 1 3484 3613 681587646 681587516 3.860000e-31 147.0
30 TraesCS5D01G517900 chr5B 91.304 92 7 1 4171 4262 681586866 681586776 1.810000e-24 124.0
31 TraesCS5D01G517900 chr5B 100.000 28 0 0 2777 2804 56846289 56846316 9.000000e-03 52.8
32 TraesCS5D01G517900 chrUn 93.544 728 35 6 1227 1942 67357568 67358295 0.000000e+00 1074.0
33 TraesCS5D01G517900 chrUn 93.913 460 28 0 1963 2422 67358278 67358737 0.000000e+00 695.0
34 TraesCS5D01G517900 chrUn 94.097 288 14 3 4497 4783 220214821 220214536 7.350000e-118 435.0
35 TraesCS5D01G517900 chrUn 90.785 293 19 1 3212 3496 67358742 67359034 7.510000e-103 385.0
36 TraesCS5D01G517900 chrUn 81.481 297 48 4 1354 1643 67332364 67332660 2.230000e-58 237.0
37 TraesCS5D01G517900 chrUn 95.588 136 6 0 917 1052 67357288 67357423 8.060000e-53 219.0
38 TraesCS5D01G517900 chrUn 87.500 128 15 1 3484 3610 299312120 299312247 3.860000e-31 147.0
39 TraesCS5D01G517900 chrUn 91.304 92 7 1 4171 4262 299312900 299312990 1.810000e-24 124.0
40 TraesCS5D01G517900 chr7D 84.429 867 127 8 1 861 6689931 6689067 0.000000e+00 846.0
41 TraesCS5D01G517900 chr7D 80.198 202 34 5 3849 4047 451865312 451865114 3.860000e-31 147.0
42 TraesCS5D01G517900 chr7D 86.667 75 5 4 3032 3104 199477162 199477091 1.430000e-10 78.7
43 TraesCS5D01G517900 chr6D 83.496 921 132 14 1 917 391567014 391567918 0.000000e+00 841.0
44 TraesCS5D01G517900 chr3D 84.304 841 118 7 3 842 61772319 61771492 0.000000e+00 809.0
45 TraesCS5D01G517900 chr3D 97.222 36 1 0 3947 3982 574816696 574816731 1.440000e-05 62.1
46 TraesCS5D01G517900 chr2D 82.706 850 141 6 1 846 190094105 190094952 0.000000e+00 750.0
47 TraesCS5D01G517900 chr2A 83.818 791 124 4 1 788 194180271 194179482 0.000000e+00 749.0
48 TraesCS5D01G517900 chr2A 83.202 381 35 16 4428 4783 22078163 22078539 5.970000e-84 322.0
49 TraesCS5D01G517900 chr2A 89.583 48 5 0 2777 2824 221206530 221206483 1.440000e-05 62.1
50 TraesCS5D01G517900 chr6B 81.522 920 150 15 1 919 93900488 93899588 0.000000e+00 739.0
51 TraesCS5D01G517900 chr6B 93.046 302 16 5 4483 4783 27593238 27592941 2.040000e-118 436.0
52 TraesCS5D01G517900 chr5A 82.298 853 144 5 1 847 1902480 1901629 0.000000e+00 732.0
53 TraesCS5D01G517900 chr5A 82.007 289 50 2 3763 4049 270889956 270890244 1.330000e-60 244.0
54 TraesCS5D01G517900 chr5A 81.667 300 47 8 3756 4050 45741841 45742137 4.780000e-60 243.0
55 TraesCS5D01G517900 chr5A 79.791 287 46 9 3768 4047 560537645 560537926 1.050000e-46 198.0
56 TraesCS5D01G517900 chr7B 81.850 865 136 14 1 859 201527090 201527939 0.000000e+00 708.0
57 TraesCS5D01G517900 chr7B 94.097 288 14 3 4497 4783 14703363 14703648 7.350000e-118 435.0
58 TraesCS5D01G517900 chr7B 88.533 375 21 11 4428 4781 589409612 589409985 7.350000e-118 435.0
59 TraesCS5D01G517900 chr7B 94.056 286 15 2 4497 4781 357927672 357927388 2.640000e-117 433.0
60 TraesCS5D01G517900 chr7B 92.739 303 17 4 4482 4783 406942879 406942581 2.640000e-117 433.0
61 TraesCS5D01G517900 chr7B 89.655 58 6 0 860 917 118870095 118870152 1.850000e-09 75.0
62 TraesCS5D01G517900 chr3A 89.227 362 21 9 4440 4783 170648359 170647998 2.040000e-118 436.0
63 TraesCS5D01G517900 chr3A 85.326 368 26 14 4428 4770 23293753 23293389 5.890000e-94 355.0
64 TraesCS5D01G517900 chr3A 86.792 53 6 1 2776 2827 486925627 486925679 1.860000e-04 58.4
65 TraesCS5D01G517900 chr1D 93.750 288 16 2 4497 4783 487586522 487586236 9.510000e-117 431.0
66 TraesCS5D01G517900 chr3B 87.302 378 25 11 4426 4783 798687353 798687727 1.240000e-110 411.0
67 TraesCS5D01G517900 chr3B 88.571 70 7 1 3031 3100 169832765 169832697 3.070000e-12 84.2
68 TraesCS5D01G517900 chr3B 89.231 65 7 0 3031 3095 169690586 169690522 1.100000e-11 82.4
69 TraesCS5D01G517900 chr4B 79.630 432 63 18 1988 2397 14653266 14652838 2.180000e-73 287.0
70 TraesCS5D01G517900 chr4B 83.154 279 44 3 3763 4038 561586446 561586168 7.950000e-63 252.0
71 TraesCS5D01G517900 chr4B 79.359 281 40 14 1602 1876 14653607 14653339 1.060000e-41 182.0
72 TraesCS5D01G517900 chr4D 83.333 186 20 7 1701 1876 8137042 8136858 1.380000e-35 161.0
73 TraesCS5D01G517900 chr4D 93.204 103 7 0 1774 1876 8011216 8011318 8.290000e-33 152.0
74 TraesCS5D01G517900 chr4D 93.617 94 6 0 1783 1876 8150922 8150829 1.790000e-29 141.0
75 TraesCS5D01G517900 chr4D 80.000 165 33 0 3883 4047 422935855 422936019 6.500000e-24 122.0
76 TraesCS5D01G517900 chr6A 79.874 159 11 10 4428 4567 453898816 453898660 3.940000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G517900 chr5D 539672503 539677285 4782 True 8833.000000 8833 100.000000 1 4783 1 chr5D.!!$R1 4782
1 TraesCS5D01G517900 chr5D 414239040 414239833 793 False 734.000000 734 83.375000 1 804 1 chr5D.!!$F3 803
2 TraesCS5D01G517900 chr4A 628848458 628853053 4595 False 705.600000 1369 88.283600 979 4427 5 chr4A.!!$F2 3448
3 TraesCS5D01G517900 chr5B 681613731 681618609 4878 True 707.800000 1258 90.624400 917 4408 5 chr5B.!!$R3 3491
4 TraesCS5D01G517900 chr5B 681341815 681345264 3449 True 666.833333 1256 90.225167 917 4427 6 chr5B.!!$R1 3510
5 TraesCS5D01G517900 chrUn 67357288 67359034 1746 False 593.250000 1074 93.457500 917 3496 4 chrUn.!!$F2 2579
6 TraesCS5D01G517900 chr7D 6689067 6689931 864 True 846.000000 846 84.429000 1 861 1 chr7D.!!$R1 860
7 TraesCS5D01G517900 chr6D 391567014 391567918 904 False 841.000000 841 83.496000 1 917 1 chr6D.!!$F1 916
8 TraesCS5D01G517900 chr3D 61771492 61772319 827 True 809.000000 809 84.304000 3 842 1 chr3D.!!$R1 839
9 TraesCS5D01G517900 chr2D 190094105 190094952 847 False 750.000000 750 82.706000 1 846 1 chr2D.!!$F1 845
10 TraesCS5D01G517900 chr2A 194179482 194180271 789 True 749.000000 749 83.818000 1 788 1 chr2A.!!$R1 787
11 TraesCS5D01G517900 chr6B 93899588 93900488 900 True 739.000000 739 81.522000 1 919 1 chr6B.!!$R2 918
12 TraesCS5D01G517900 chr5A 1901629 1902480 851 True 732.000000 732 82.298000 1 847 1 chr5A.!!$R1 846
13 TraesCS5D01G517900 chr7B 201527090 201527939 849 False 708.000000 708 81.850000 1 859 1 chr7B.!!$F3 858
14 TraesCS5D01G517900 chr4B 14652838 14653607 769 True 234.500000 287 79.494500 1602 2397 2 chr4B.!!$R2 795

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
260 270 0.111832 ATGCCATGGCCTCATCGAAT 59.888 50.0 33.44 14.95 41.09 3.34 F
1374 1517 0.243365 GAGATCGAGCGAGCATGGAT 59.757 55.0 10.86 0.00 32.23 3.41 F
1963 2126 0.389025 TCGCTCACTTCAGCAGTTCA 59.611 50.0 0.00 0.00 39.62 3.18 F
3497 3892 0.234625 AATTAGTGCGTGTGTGTGCG 59.765 50.0 0.00 0.00 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1944 2107 0.389025 TGAACTGCTGAAGTGAGCGA 59.611 50.0 0.00 0.0 42.32 4.93 R
2373 2556 0.630673 ATGCCTTGGCCATGAGGTTA 59.369 50.0 22.07 13.4 37.19 2.85 R
3579 3974 0.037697 TGACACGTACAGATGCACCC 60.038 55.0 0.00 0.0 0.00 4.61 R
4584 7662 0.035036 GGCGGCTAGGGTTTAGGATC 59.965 60.0 0.00 0.0 0.00 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.407162 CCTACTCTTCCTCGTCGGAGT 60.407 57.143 6.39 6.39 44.28 3.85
34 35 2.158986 CCTACTCTTCCTCGTCGGAGTA 60.159 54.545 7.70 7.70 44.28 2.59
137 143 2.125552 CAGCGCCCGAACTGATGA 60.126 61.111 2.29 0.00 35.90 2.92
142 148 1.745489 GCCCGAACTGATGACCCAC 60.745 63.158 0.00 0.00 0.00 4.61
162 168 1.001764 CAGGGCACTGGAGAATGCA 60.002 57.895 8.54 0.00 43.93 3.96
167 173 1.612726 GGCACTGGAGAATGCAACTCT 60.613 52.381 18.88 11.67 43.93 3.24
184 190 4.243008 TGCCTTGCCGACGTCCAA 62.243 61.111 10.58 8.47 0.00 3.53
260 270 0.111832 ATGCCATGGCCTCATCGAAT 59.888 50.000 33.44 14.95 41.09 3.34
345 362 2.431454 TATGCCAGACGGACCGCAT 61.431 57.895 15.39 11.29 43.95 4.73
424 441 1.520564 CGCAATGGATTCCCGACGA 60.521 57.895 0.00 0.00 34.29 4.20
426 443 1.091537 GCAATGGATTCCCGACGAAA 58.908 50.000 0.00 0.00 33.08 3.46
436 453 1.582968 CCGACGAAAGGAGTCCGAA 59.417 57.895 2.76 0.00 35.33 4.30
460 477 2.270205 CGTGCATGGGCCTTCTCT 59.730 61.111 4.53 0.00 40.13 3.10
530 547 4.593864 GGATGAGCTCGGGGTCGC 62.594 72.222 10.38 4.26 42.30 5.19
550 567 2.320781 CCGGATCTGTAGGTGAAGGAT 58.679 52.381 0.00 0.00 0.00 3.24
552 569 3.895656 CCGGATCTGTAGGTGAAGGATTA 59.104 47.826 0.00 0.00 0.00 1.75
617 635 1.052124 ACGAGTTTGGGTGGTGGAGA 61.052 55.000 0.00 0.00 0.00 3.71
627 645 0.251832 GTGGTGGAGAGGAGTGGAGA 60.252 60.000 0.00 0.00 0.00 3.71
656 674 0.404040 TGAAGTGGCTAGGGTTTGGG 59.596 55.000 0.00 0.00 0.00 4.12
688 706 4.685848 CGGATGTGGAGGAATTTATGTGGA 60.686 45.833 0.00 0.00 0.00 4.02
755 775 0.544595 GGCGTCCCATATCTACCCCT 60.545 60.000 0.00 0.00 0.00 4.79
804 825 4.070552 GCCCAGGCGTTCGAGAGT 62.071 66.667 0.00 0.00 0.00 3.24
850 872 3.658757 AAAAACATGACCGGACAATGG 57.341 42.857 9.46 5.18 0.00 3.16
886 908 2.125326 CCGCCCAGACGTATGAGGA 61.125 63.158 12.68 0.00 0.00 3.71
888 910 1.101635 CGCCCAGACGTATGAGGAGA 61.102 60.000 12.68 0.00 0.00 3.71
897 919 3.432378 ACGTATGAGGAGAGTTTGAGGT 58.568 45.455 0.00 0.00 0.00 3.85
903 925 1.376037 GAGAGTTTGAGGTGCCCGG 60.376 63.158 0.00 0.00 0.00 5.73
926 948 6.294453 CGGTTGTAGATGCTCTAATCTCTCAT 60.294 42.308 0.00 0.00 37.98 2.90
973 995 8.608185 TCCAAAAATAATCAAGGATTAAGCCT 57.392 30.769 6.41 6.41 37.92 4.58
1052 1074 4.700213 CGTGATTGGGGTATCTTCTTGTTT 59.300 41.667 0.00 0.00 0.00 2.83
1054 1076 5.125578 GTGATTGGGGTATCTTCTTGTTTCC 59.874 44.000 0.00 0.00 0.00 3.13
1060 1082 5.104067 GGGGTATCTTCTTGTTTCCCATAGT 60.104 44.000 0.00 0.00 35.56 2.12
1062 1084 6.990939 GGGTATCTTCTTGTTTCCCATAGTAC 59.009 42.308 0.00 0.00 34.20 2.73
1115 1250 2.190578 CCCTTGCCGGAGCTTAGG 59.809 66.667 5.05 2.99 39.69 2.69
1158 1293 3.130264 TGCCAGGCATGAAACAAGT 57.870 47.368 11.22 0.00 31.71 3.16
1159 1294 2.284754 TGCCAGGCATGAAACAAGTA 57.715 45.000 11.22 0.00 31.71 2.24
1160 1295 2.806434 TGCCAGGCATGAAACAAGTAT 58.194 42.857 11.22 0.00 31.71 2.12
1259 1394 2.030185 TGTGTCTTCTCGTCAGGTAAGC 60.030 50.000 0.00 0.00 0.00 3.09
1272 1407 5.690409 CGTCAGGTAAGCGTGTGATTTATAT 59.310 40.000 0.00 0.00 32.77 0.86
1303 1445 9.862371 GATCCATCGATCTGTATATAAACTGTT 57.138 33.333 0.00 0.00 41.59 3.16
1349 1492 5.009210 GTGATTCGATCAGGTAGAAGTAGCT 59.991 44.000 0.00 0.00 40.53 3.32
1350 1493 6.205076 GTGATTCGATCAGGTAGAAGTAGCTA 59.795 42.308 0.00 0.00 40.53 3.32
1374 1517 0.243365 GAGATCGAGCGAGCATGGAT 59.757 55.000 10.86 0.00 32.23 3.41
1637 1784 1.448540 CCGCGAGCTGGAACTTCAT 60.449 57.895 8.23 0.00 0.00 2.57
1942 2105 0.879765 GCAGTTCAGCTCAGCATTGT 59.120 50.000 0.00 0.00 0.00 2.71
1943 2106 1.268899 GCAGTTCAGCTCAGCATTGTT 59.731 47.619 0.00 0.00 0.00 2.83
1944 2107 2.288030 GCAGTTCAGCTCAGCATTGTTT 60.288 45.455 0.00 0.00 0.00 2.83
1945 2108 3.562505 CAGTTCAGCTCAGCATTGTTTC 58.437 45.455 0.00 0.00 0.00 2.78
1946 2109 2.225019 AGTTCAGCTCAGCATTGTTTCG 59.775 45.455 0.00 0.00 0.00 3.46
1947 2110 0.518636 TCAGCTCAGCATTGTTTCGC 59.481 50.000 0.00 0.00 0.00 4.70
1948 2111 0.520404 CAGCTCAGCATTGTTTCGCT 59.480 50.000 0.00 0.00 39.66 4.93
1949 2112 0.801251 AGCTCAGCATTGTTTCGCTC 59.199 50.000 0.00 0.00 35.96 5.03
1950 2113 0.518636 GCTCAGCATTGTTTCGCTCA 59.481 50.000 0.00 0.00 35.96 4.26
1951 2114 1.727213 GCTCAGCATTGTTTCGCTCAC 60.727 52.381 0.00 0.00 35.96 3.51
1952 2115 1.802960 CTCAGCATTGTTTCGCTCACT 59.197 47.619 0.00 0.00 35.96 3.41
1953 2116 2.221169 TCAGCATTGTTTCGCTCACTT 58.779 42.857 0.00 0.00 35.96 3.16
1954 2117 2.224079 TCAGCATTGTTTCGCTCACTTC 59.776 45.455 0.00 0.00 35.96 3.01
1955 2118 2.031769 CAGCATTGTTTCGCTCACTTCA 60.032 45.455 0.00 0.00 35.96 3.02
1956 2119 2.225019 AGCATTGTTTCGCTCACTTCAG 59.775 45.455 0.00 0.00 31.16 3.02
1957 2120 2.578495 CATTGTTTCGCTCACTTCAGC 58.422 47.619 0.00 0.00 35.90 4.26
1958 2121 1.662517 TTGTTTCGCTCACTTCAGCA 58.337 45.000 0.00 0.00 39.62 4.41
1959 2122 1.220529 TGTTTCGCTCACTTCAGCAG 58.779 50.000 0.00 0.00 39.62 4.24
1960 2123 1.221414 GTTTCGCTCACTTCAGCAGT 58.779 50.000 0.00 0.00 39.62 4.40
1961 2124 1.599542 GTTTCGCTCACTTCAGCAGTT 59.400 47.619 0.00 0.00 39.62 3.16
1962 2125 1.502231 TTCGCTCACTTCAGCAGTTC 58.498 50.000 0.00 0.00 39.62 3.01
1963 2126 0.389025 TCGCTCACTTCAGCAGTTCA 59.611 50.000 0.00 0.00 39.62 3.18
1964 2127 0.788995 CGCTCACTTCAGCAGTTCAG 59.211 55.000 0.00 0.00 39.62 3.02
1965 2128 1.871408 CGCTCACTTCAGCAGTTCAGT 60.871 52.381 0.00 0.00 39.62 3.41
1966 2129 2.216898 GCTCACTTCAGCAGTTCAGTT 58.783 47.619 0.00 0.00 39.43 3.16
1967 2130 2.222911 GCTCACTTCAGCAGTTCAGTTC 59.777 50.000 0.00 0.00 39.43 3.01
1968 2131 3.461061 CTCACTTCAGCAGTTCAGTTCA 58.539 45.455 0.00 0.00 30.92 3.18
1969 2132 3.461061 TCACTTCAGCAGTTCAGTTCAG 58.539 45.455 0.00 0.00 30.92 3.02
1970 2133 2.032204 CACTTCAGCAGTTCAGTTCAGC 60.032 50.000 0.00 0.00 30.92 4.26
1971 2134 2.158842 ACTTCAGCAGTTCAGTTCAGCT 60.159 45.455 0.00 0.00 35.63 4.24
1972 2135 2.160822 TCAGCAGTTCAGTTCAGCTC 57.839 50.000 0.00 0.00 32.35 4.09
1973 2136 1.413812 TCAGCAGTTCAGTTCAGCTCA 59.586 47.619 0.00 0.00 32.35 4.26
1974 2137 1.799403 CAGCAGTTCAGTTCAGCTCAG 59.201 52.381 0.00 0.00 32.35 3.35
1975 2138 0.516439 GCAGTTCAGTTCAGCTCAGC 59.484 55.000 0.00 0.00 0.00 4.26
1976 2139 1.875009 CAGTTCAGTTCAGCTCAGCA 58.125 50.000 0.00 0.00 0.00 4.41
1977 2140 2.424557 CAGTTCAGTTCAGCTCAGCAT 58.575 47.619 0.00 0.00 0.00 3.79
1978 2141 2.812591 CAGTTCAGTTCAGCTCAGCATT 59.187 45.455 0.00 0.00 0.00 3.56
1979 2142 2.812591 AGTTCAGTTCAGCTCAGCATTG 59.187 45.455 0.00 0.00 0.00 2.82
1980 2143 2.810274 GTTCAGTTCAGCTCAGCATTGA 59.190 45.455 0.00 0.00 0.00 2.57
1981 2144 2.420642 TCAGTTCAGCTCAGCATTGAC 58.579 47.619 0.00 0.00 0.00 3.18
1982 2145 2.038164 TCAGTTCAGCTCAGCATTGACT 59.962 45.455 0.00 0.00 0.00 3.41
1983 2146 3.259123 TCAGTTCAGCTCAGCATTGACTA 59.741 43.478 0.00 0.00 0.00 2.59
2087 2252 3.681835 ACTCCAGGACCGTGACGC 61.682 66.667 0.00 0.00 0.00 5.19
2373 2556 1.134280 CCGGCTTCCACTCTGATCATT 60.134 52.381 0.00 0.00 0.00 2.57
2415 2598 4.100963 TGTTCACCACTTCACTCTACACAT 59.899 41.667 0.00 0.00 0.00 3.21
2416 2599 4.955811 TCACCACTTCACTCTACACATT 57.044 40.909 0.00 0.00 0.00 2.71
2417 2600 5.290493 TCACCACTTCACTCTACACATTT 57.710 39.130 0.00 0.00 0.00 2.32
2418 2601 5.680619 TCACCACTTCACTCTACACATTTT 58.319 37.500 0.00 0.00 0.00 1.82
2419 2602 5.758296 TCACCACTTCACTCTACACATTTTC 59.242 40.000 0.00 0.00 0.00 2.29
2420 2603 5.760253 CACCACTTCACTCTACACATTTTCT 59.240 40.000 0.00 0.00 0.00 2.52
2421 2604 6.260936 CACCACTTCACTCTACACATTTTCTT 59.739 38.462 0.00 0.00 0.00 2.52
2422 2605 6.828785 ACCACTTCACTCTACACATTTTCTTT 59.171 34.615 0.00 0.00 0.00 2.52
2423 2606 7.012421 ACCACTTCACTCTACACATTTTCTTTC 59.988 37.037 0.00 0.00 0.00 2.62
2424 2607 7.227512 CCACTTCACTCTACACATTTTCTTTCT 59.772 37.037 0.00 0.00 0.00 2.52
2425 2608 8.616076 CACTTCACTCTACACATTTTCTTTCTT 58.384 33.333 0.00 0.00 0.00 2.52
2490 2673 6.592798 AAGACATGTTTGCAGTTCAAATTG 57.407 33.333 0.00 0.00 45.43 2.32
2537 2722 6.777091 TGGTACAGAGTTAGTACTTGTTACCA 59.223 38.462 0.00 10.36 41.16 3.25
2635 2822 2.815503 ACTTGTGGCCCGTACAAAATAC 59.184 45.455 8.35 0.00 37.56 1.89
2649 2836 8.582930 CCGTACAAAATACTGTGCAAATTTATG 58.417 33.333 0.00 0.00 32.02 1.90
2719 3040 6.283694 TGTAGCAAATTGCCACAAATGTTTA 58.716 32.000 16.21 0.00 41.70 2.01
2747 3068 8.564574 TGAACACAATACAATAAAAGACAGTCC 58.435 33.333 0.00 0.00 0.00 3.85
2771 3092 1.992667 ACACGCACATACACTCATTCG 59.007 47.619 0.00 0.00 0.00 3.34
2829 3162 3.544698 AGTCTAGGACTTGAACCCTGA 57.455 47.619 0.00 0.00 40.28 3.86
2843 3176 2.671070 CTGACGGGCTGGTTCCAT 59.329 61.111 0.00 0.00 0.00 3.41
2850 3183 0.967380 GGGCTGGTTCCATCACAAGG 60.967 60.000 0.00 0.00 0.00 3.61
2969 3331 5.621197 TGATCAACGGTACCAATTTTGAG 57.379 39.130 13.54 0.00 30.07 3.02
2974 3336 4.081322 ACGGTACCAATTTTGAGTCACT 57.919 40.909 13.54 0.00 0.00 3.41
2977 3339 4.394729 GGTACCAATTTTGAGTCACTCCA 58.605 43.478 7.15 0.00 0.00 3.86
3044 3406 9.484806 AATCTCTCCATTCCAAAATGTAAGATT 57.515 29.630 10.72 10.72 40.63 2.40
3046 3408 9.973661 TCTCTCCATTCCAAAATGTAAGATTAA 57.026 29.630 0.00 0.00 40.63 1.40
3096 3458 9.667107 AAATAATCTTACATTTTGAGACGGAGA 57.333 29.630 0.00 0.00 0.00 3.71
3097 3459 8.879342 ATAATCTTACATTTTGAGACGGAGAG 57.121 34.615 0.00 0.00 0.00 3.20
3098 3460 5.977489 TCTTACATTTTGAGACGGAGAGA 57.023 39.130 0.00 0.00 0.00 3.10
3099 3461 5.955488 TCTTACATTTTGAGACGGAGAGAG 58.045 41.667 0.00 0.00 0.00 3.20
3100 3462 2.966050 ACATTTTGAGACGGAGAGAGC 58.034 47.619 0.00 0.00 0.00 4.09
3101 3463 2.300152 ACATTTTGAGACGGAGAGAGCA 59.700 45.455 0.00 0.00 0.00 4.26
3102 3464 2.440539 TTTTGAGACGGAGAGAGCAC 57.559 50.000 0.00 0.00 0.00 4.40
3103 3465 1.621992 TTTGAGACGGAGAGAGCACT 58.378 50.000 0.00 0.00 0.00 4.40
3104 3466 1.621992 TTGAGACGGAGAGAGCACTT 58.378 50.000 0.00 0.00 0.00 3.16
3105 3467 2.491675 TGAGACGGAGAGAGCACTTA 57.508 50.000 0.00 0.00 0.00 2.24
3106 3468 3.006112 TGAGACGGAGAGAGCACTTAT 57.994 47.619 0.00 0.00 0.00 1.73
3107 3469 3.357203 TGAGACGGAGAGAGCACTTATT 58.643 45.455 0.00 0.00 0.00 1.40
3108 3470 4.524053 TGAGACGGAGAGAGCACTTATTA 58.476 43.478 0.00 0.00 0.00 0.98
3109 3471 5.133941 TGAGACGGAGAGAGCACTTATTAT 58.866 41.667 0.00 0.00 0.00 1.28
3110 3472 5.009110 TGAGACGGAGAGAGCACTTATTATG 59.991 44.000 0.00 0.00 0.00 1.90
3111 3473 4.279671 AGACGGAGAGAGCACTTATTATGG 59.720 45.833 0.00 0.00 0.00 2.74
3112 3474 4.215908 ACGGAGAGAGCACTTATTATGGA 58.784 43.478 0.00 0.00 0.00 3.41
3113 3475 4.649674 ACGGAGAGAGCACTTATTATGGAA 59.350 41.667 0.00 0.00 0.00 3.53
3114 3476 4.985409 CGGAGAGAGCACTTATTATGGAAC 59.015 45.833 0.00 0.00 0.00 3.62
3115 3477 5.301555 GGAGAGAGCACTTATTATGGAACC 58.698 45.833 0.00 0.00 0.00 3.62
3116 3478 5.163301 GGAGAGAGCACTTATTATGGAACCA 60.163 44.000 0.00 0.00 0.00 3.67
3117 3479 5.675538 AGAGAGCACTTATTATGGAACCAC 58.324 41.667 0.00 0.00 0.00 4.16
3118 3480 5.189736 AGAGAGCACTTATTATGGAACCACA 59.810 40.000 0.00 0.00 0.00 4.17
3119 3481 5.431765 AGAGCACTTATTATGGAACCACAG 58.568 41.667 0.00 0.00 0.00 3.66
3120 3482 3.947834 AGCACTTATTATGGAACCACAGC 59.052 43.478 0.00 0.00 0.00 4.40
3123 3485 4.889409 CACTTATTATGGAACCACAGCCAT 59.111 41.667 0.00 0.00 46.21 4.40
3127 3490 2.442236 ATGGAACCACAGCCATAAGG 57.558 50.000 0.00 0.00 42.86 2.69
3166 3529 6.808008 AATCTGATCAGTGGTACAAAGTTG 57.192 37.500 21.92 0.00 44.16 3.16
3190 3553 9.601810 TTGGAGTCACACAACCTAGATATATAT 57.398 33.333 0.00 0.00 0.00 0.86
3368 3754 3.064248 CTCGACTCTGCTTTGCGCG 62.064 63.158 0.00 0.00 43.27 6.86
3486 3881 6.473455 GTCCAATTAGCATGTTCAATTAGTGC 59.527 38.462 0.00 0.00 36.11 4.40
3495 3890 3.242576 TGTTCAATTAGTGCGTGTGTGTG 60.243 43.478 0.00 0.00 0.00 3.82
3496 3891 1.262950 TCAATTAGTGCGTGTGTGTGC 59.737 47.619 0.00 0.00 0.00 4.57
3497 3892 0.234625 AATTAGTGCGTGTGTGTGCG 59.765 50.000 0.00 0.00 0.00 5.34
3573 3968 5.950758 TGTTCAATTTAGCATGTTACCGT 57.049 34.783 0.00 0.00 0.00 4.83
3610 4005 2.812358 ACGTGTCACTACAGCATCAA 57.188 45.000 0.65 0.00 35.91 2.57
3644 4149 4.736126 TTAGCATGTCGGATCTTTCTCA 57.264 40.909 0.00 0.00 0.00 3.27
3652 4157 3.806521 GTCGGATCTTTCTCATGTCATGG 59.193 47.826 12.90 4.23 0.00 3.66
3674 4211 4.458989 GGTCCATCATGCTAGAGAGAGTAG 59.541 50.000 0.00 0.00 0.00 2.57
3731 4278 6.338214 TCACTCTGCATATTAGGTCATCTC 57.662 41.667 0.00 0.00 0.00 2.75
3732 4279 6.073981 TCACTCTGCATATTAGGTCATCTCT 58.926 40.000 0.00 0.00 0.00 3.10
3734 4281 5.245751 ACTCTGCATATTAGGTCATCTCTGG 59.754 44.000 0.00 0.00 0.00 3.86
3738 4285 7.843252 TCTGCATATTAGGTCATCTCTGGATAT 59.157 37.037 0.00 0.00 0.00 1.63
3786 4334 2.030274 GGTCATTCGGTTTGGTGGAAAG 60.030 50.000 0.00 0.00 0.00 2.62
3796 4344 4.174762 GTTTGGTGGAAAGCAAAACGTAA 58.825 39.130 4.80 0.00 0.00 3.18
3811 4359 9.918630 AGCAAAACGTAAGAATTAGAAGTAGTA 57.081 29.630 0.00 0.00 43.62 1.82
3837 4385 7.047460 AGGATTTTGATAGGATGACATTTGC 57.953 36.000 0.00 0.00 0.00 3.68
3841 4389 6.395426 TTTGATAGGATGACATTTGCCATC 57.605 37.500 0.00 0.00 38.66 3.51
3860 4408 4.098501 CCATCCTAAGAAATTGACTTGCCC 59.901 45.833 7.97 0.00 0.00 5.36
3870 4418 2.107950 TGACTTGCCCCGTTTCTATG 57.892 50.000 0.00 0.00 0.00 2.23
3871 4419 1.349688 TGACTTGCCCCGTTTCTATGT 59.650 47.619 0.00 0.00 0.00 2.29
3872 4420 1.737793 GACTTGCCCCGTTTCTATGTG 59.262 52.381 0.00 0.00 0.00 3.21
3882 4430 5.448632 CCCCGTTTCTATGTGTAAAATGAGC 60.449 44.000 0.00 0.00 0.00 4.26
3887 4435 7.271223 CGTTTCTATGTGTAAAATGAGCTTTGG 59.729 37.037 0.00 0.00 0.00 3.28
3894 4442 5.417580 GTGTAAAATGAGCTTTGGGTGGATA 59.582 40.000 0.00 0.00 0.00 2.59
3899 4447 4.422073 TGAGCTTTGGGTGGATATGTAG 57.578 45.455 0.00 0.00 0.00 2.74
3965 4514 9.515226 AATGTATGTACACATTTCCTACAAACT 57.485 29.630 0.00 0.00 44.75 2.66
3967 4516 8.151596 TGTATGTACACATTTCCTACAAACTGA 58.848 33.333 0.00 0.00 37.76 3.41
3979 4528 8.893219 TTCCTACAAACTGAATGCATCTATAG 57.107 34.615 0.00 0.00 0.00 1.31
3982 4531 8.099537 CCTACAAACTGAATGCATCTATAGGAT 58.900 37.037 0.00 0.00 34.51 3.24
3983 4532 9.499479 CTACAAACTGAATGCATCTATAGGATT 57.501 33.333 0.00 0.00 31.27 3.01
3984 4533 8.757982 ACAAACTGAATGCATCTATAGGATTT 57.242 30.769 0.00 0.00 31.27 2.17
4022 4571 8.662141 TGCTTATTTCTATGTTTTTCCTACGAC 58.338 33.333 0.00 0.00 0.00 4.34
4032 4581 3.887621 TTTCCTACGACAATCCTCCAG 57.112 47.619 0.00 0.00 0.00 3.86
4036 4585 1.065701 CTACGACAATCCTCCAGACCG 59.934 57.143 0.00 0.00 0.00 4.79
4050 5556 2.235402 CCAGACCGAACTAGGCCTAAAA 59.765 50.000 14.85 0.00 33.69 1.52
4155 7218 3.545481 CACGTGCGCCAGATCGAC 61.545 66.667 4.18 0.00 0.00 4.20
4173 7236 2.485124 CGACCGGATACACTCTCCTAGT 60.485 54.545 9.46 0.00 39.81 2.57
4281 7348 1.906994 TACACGCTTTCCGCATGTGC 61.907 55.000 0.00 0.00 41.76 4.57
4349 7425 3.626924 AGACCACGGGCCACTCAC 61.627 66.667 4.39 0.00 0.00 3.51
4409 7487 0.620556 CCCACAGTTGGCTAGTCCAT 59.379 55.000 6.71 0.00 46.04 3.41
4427 7505 7.817418 AGTCCATGTAAATTTTGTAGTGTGT 57.183 32.000 0.00 0.00 0.00 3.72
4428 7506 7.648142 AGTCCATGTAAATTTTGTAGTGTGTG 58.352 34.615 0.00 0.00 0.00 3.82
4429 7507 7.284489 AGTCCATGTAAATTTTGTAGTGTGTGT 59.716 33.333 0.00 0.00 0.00 3.72
4430 7508 7.918562 GTCCATGTAAATTTTGTAGTGTGTGTT 59.081 33.333 0.00 0.00 0.00 3.32
4431 7509 7.918033 TCCATGTAAATTTTGTAGTGTGTGTTG 59.082 33.333 0.00 0.00 0.00 3.33
4432 7510 7.918033 CCATGTAAATTTTGTAGTGTGTGTTGA 59.082 33.333 0.00 0.00 0.00 3.18
4433 7511 8.957028 CATGTAAATTTTGTAGTGTGTGTTGAG 58.043 33.333 0.00 0.00 0.00 3.02
4434 7512 8.046294 TGTAAATTTTGTAGTGTGTGTTGAGT 57.954 30.769 0.00 0.00 0.00 3.41
4435 7513 9.163899 TGTAAATTTTGTAGTGTGTGTTGAGTA 57.836 29.630 0.00 0.00 0.00 2.59
4436 7514 9.991388 GTAAATTTTGTAGTGTGTGTTGAGTAA 57.009 29.630 0.00 0.00 0.00 2.24
4437 7515 8.905103 AAATTTTGTAGTGTGTGTTGAGTAAC 57.095 30.769 0.00 0.00 37.32 2.50
4438 7516 5.705813 TTTGTAGTGTGTGTTGAGTAACG 57.294 39.130 0.00 0.00 39.71 3.18
4439 7517 4.374843 TGTAGTGTGTGTTGAGTAACGT 57.625 40.909 0.00 0.00 39.71 3.99
4440 7518 4.106909 TGTAGTGTGTGTTGAGTAACGTG 58.893 43.478 0.00 0.00 39.71 4.49
4441 7519 3.241067 AGTGTGTGTTGAGTAACGTGT 57.759 42.857 0.00 0.00 39.71 4.49
4442 7520 4.374843 AGTGTGTGTTGAGTAACGTGTA 57.625 40.909 0.00 0.00 39.71 2.90
4443 7521 4.940463 AGTGTGTGTTGAGTAACGTGTAT 58.060 39.130 0.00 0.00 39.71 2.29
4444 7522 5.353938 AGTGTGTGTTGAGTAACGTGTATT 58.646 37.500 0.00 0.00 39.71 1.89
4445 7523 6.506147 AGTGTGTGTTGAGTAACGTGTATTA 58.494 36.000 0.00 0.00 39.71 0.98
4446 7524 6.639686 AGTGTGTGTTGAGTAACGTGTATTAG 59.360 38.462 0.00 0.00 39.71 1.73
4447 7525 5.921976 TGTGTGTTGAGTAACGTGTATTAGG 59.078 40.000 0.00 0.00 39.71 2.69
4448 7526 6.151691 GTGTGTTGAGTAACGTGTATTAGGA 58.848 40.000 0.00 0.00 39.71 2.94
4449 7527 6.642131 GTGTGTTGAGTAACGTGTATTAGGAA 59.358 38.462 0.00 0.00 39.71 3.36
4450 7528 7.169645 GTGTGTTGAGTAACGTGTATTAGGAAA 59.830 37.037 0.00 0.00 39.71 3.13
4451 7529 7.874016 TGTGTTGAGTAACGTGTATTAGGAAAT 59.126 33.333 0.00 0.00 39.71 2.17
4452 7530 9.357652 GTGTTGAGTAACGTGTATTAGGAAATA 57.642 33.333 0.00 0.00 39.71 1.40
4479 7557 7.964624 AGGTTAGACTAGGAAATATACAAGGC 58.035 38.462 0.00 0.00 0.00 4.35
4480 7558 7.016366 AGGTTAGACTAGGAAATATACAAGGCC 59.984 40.741 0.00 0.00 0.00 5.19
4481 7559 7.016366 GGTTAGACTAGGAAATATACAAGGCCT 59.984 40.741 0.00 0.00 0.00 5.19
4482 7560 8.430431 GTTAGACTAGGAAATATACAAGGCCTT 58.570 37.037 13.78 13.78 0.00 4.35
4483 7561 6.831976 AGACTAGGAAATATACAAGGCCTTG 58.168 40.000 38.30 38.30 45.58 3.61
4523 7601 2.032528 CCCACGAGGCTCAAGCAA 59.967 61.111 15.95 0.00 44.36 3.91
4524 7602 1.377725 CCCACGAGGCTCAAGCAAT 60.378 57.895 15.95 0.00 44.36 3.56
4525 7603 0.107703 CCCACGAGGCTCAAGCAATA 60.108 55.000 15.95 0.00 44.36 1.90
4526 7604 1.009829 CCACGAGGCTCAAGCAATAC 58.990 55.000 15.95 0.00 44.36 1.89
4527 7605 1.675714 CCACGAGGCTCAAGCAATACA 60.676 52.381 15.95 0.00 44.36 2.29
4528 7606 2.076100 CACGAGGCTCAAGCAATACAA 58.924 47.619 15.95 0.00 44.36 2.41
4529 7607 2.076863 ACGAGGCTCAAGCAATACAAC 58.923 47.619 15.95 0.00 44.36 3.32
4530 7608 1.061131 CGAGGCTCAAGCAATACAACG 59.939 52.381 15.95 0.00 44.36 4.10
4531 7609 2.346803 GAGGCTCAAGCAATACAACGA 58.653 47.619 10.25 0.00 44.36 3.85
4532 7610 2.742053 GAGGCTCAAGCAATACAACGAA 59.258 45.455 10.25 0.00 44.36 3.85
4533 7611 2.484264 AGGCTCAAGCAATACAACGAAC 59.516 45.455 4.13 0.00 44.36 3.95
4534 7612 2.484264 GGCTCAAGCAATACAACGAACT 59.516 45.455 4.13 0.00 44.36 3.01
4535 7613 3.682858 GGCTCAAGCAATACAACGAACTA 59.317 43.478 4.13 0.00 44.36 2.24
4536 7614 4.332819 GGCTCAAGCAATACAACGAACTAT 59.667 41.667 4.13 0.00 44.36 2.12
4537 7615 5.163754 GGCTCAAGCAATACAACGAACTATT 60.164 40.000 4.13 0.00 44.36 1.73
4538 7616 5.960105 GCTCAAGCAATACAACGAACTATTC 59.040 40.000 0.00 0.00 41.59 1.75
4539 7617 6.183360 GCTCAAGCAATACAACGAACTATTCT 60.183 38.462 0.00 0.00 41.59 2.40
4540 7618 7.010183 GCTCAAGCAATACAACGAACTATTCTA 59.990 37.037 0.00 0.00 41.59 2.10
4541 7619 8.942338 TCAAGCAATACAACGAACTATTCTAT 57.058 30.769 0.00 0.00 0.00 1.98
4542 7620 9.031360 TCAAGCAATACAACGAACTATTCTATC 57.969 33.333 0.00 0.00 0.00 2.08
4543 7621 8.817100 CAAGCAATACAACGAACTATTCTATCA 58.183 33.333 0.00 0.00 0.00 2.15
4544 7622 8.942338 AGCAATACAACGAACTATTCTATCAA 57.058 30.769 0.00 0.00 0.00 2.57
4545 7623 9.547753 AGCAATACAACGAACTATTCTATCAAT 57.452 29.630 0.00 0.00 0.00 2.57
4546 7624 9.798885 GCAATACAACGAACTATTCTATCAATC 57.201 33.333 0.00 0.00 0.00 2.67
4551 7629 9.099454 ACAACGAACTATTCTATCAATCCTTTC 57.901 33.333 0.00 0.00 0.00 2.62
4552 7630 9.319143 CAACGAACTATTCTATCAATCCTTTCT 57.681 33.333 0.00 0.00 0.00 2.52
4553 7631 9.535878 AACGAACTATTCTATCAATCCTTTCTC 57.464 33.333 0.00 0.00 0.00 2.87
4554 7632 8.919145 ACGAACTATTCTATCAATCCTTTCTCT 58.081 33.333 0.00 0.00 0.00 3.10
4555 7633 9.405587 CGAACTATTCTATCAATCCTTTCTCTC 57.594 37.037 0.00 0.00 0.00 3.20
4556 7634 9.705290 GAACTATTCTATCAATCCTTTCTCTCC 57.295 37.037 0.00 0.00 0.00 3.71
4557 7635 9.445973 AACTATTCTATCAATCCTTTCTCTCCT 57.554 33.333 0.00 0.00 0.00 3.69
4558 7636 9.445973 ACTATTCTATCAATCCTTTCTCTCCTT 57.554 33.333 0.00 0.00 0.00 3.36
4561 7639 7.986553 TCTATCAATCCTTTCTCTCCTTTCT 57.013 36.000 0.00 0.00 0.00 2.52
4562 7640 9.494055 TTCTATCAATCCTTTCTCTCCTTTCTA 57.506 33.333 0.00 0.00 0.00 2.10
4563 7641 9.494055 TCTATCAATCCTTTCTCTCCTTTCTAA 57.506 33.333 0.00 0.00 0.00 2.10
4564 7642 9.541143 CTATCAATCCTTTCTCTCCTTTCTAAC 57.459 37.037 0.00 0.00 0.00 2.34
4565 7643 7.316393 TCAATCCTTTCTCTCCTTTCTAACA 57.684 36.000 0.00 0.00 0.00 2.41
4566 7644 7.922382 TCAATCCTTTCTCTCCTTTCTAACAT 58.078 34.615 0.00 0.00 0.00 2.71
4567 7645 7.826252 TCAATCCTTTCTCTCCTTTCTAACATG 59.174 37.037 0.00 0.00 0.00 3.21
4568 7646 6.054860 TCCTTTCTCTCCTTTCTAACATGG 57.945 41.667 0.00 0.00 0.00 3.66
4569 7647 5.548056 TCCTTTCTCTCCTTTCTAACATGGT 59.452 40.000 0.00 0.00 0.00 3.55
4570 7648 6.729100 TCCTTTCTCTCCTTTCTAACATGGTA 59.271 38.462 0.00 0.00 0.00 3.25
4571 7649 7.403231 TCCTTTCTCTCCTTTCTAACATGGTAT 59.597 37.037 0.00 0.00 0.00 2.73
4572 7650 8.049721 CCTTTCTCTCCTTTCTAACATGGTATT 58.950 37.037 0.00 0.00 0.00 1.89
4573 7651 9.454859 CTTTCTCTCCTTTCTAACATGGTATTT 57.545 33.333 0.00 0.00 0.00 1.40
4577 7655 9.197694 CTCTCCTTTCTAACATGGTATTTATCG 57.802 37.037 0.00 0.00 0.00 2.92
4578 7656 7.656137 TCTCCTTTCTAACATGGTATTTATCGC 59.344 37.037 0.00 0.00 0.00 4.58
4579 7657 7.276658 TCCTTTCTAACATGGTATTTATCGCA 58.723 34.615 0.00 0.00 0.00 5.10
4580 7658 7.771361 TCCTTTCTAACATGGTATTTATCGCAA 59.229 33.333 0.00 0.00 0.00 4.85
4581 7659 8.070171 CCTTTCTAACATGGTATTTATCGCAAG 58.930 37.037 0.00 0.00 0.00 4.01
4582 7660 8.500753 TTTCTAACATGGTATTTATCGCAAGT 57.499 30.769 0.00 0.00 39.48 3.16
4583 7661 7.709269 TCTAACATGGTATTTATCGCAAGTC 57.291 36.000 0.00 0.00 39.48 3.01
4584 7662 5.403897 AACATGGTATTTATCGCAAGTCG 57.596 39.130 0.00 0.00 40.15 4.18
4594 7672 2.288961 TCGCAAGTCGATCCTAAACC 57.711 50.000 0.00 0.00 43.16 3.27
4595 7673 1.134907 TCGCAAGTCGATCCTAAACCC 60.135 52.381 0.00 0.00 43.16 4.11
4596 7674 1.134788 CGCAAGTCGATCCTAAACCCT 60.135 52.381 0.00 0.00 41.67 4.34
4597 7675 2.100252 CGCAAGTCGATCCTAAACCCTA 59.900 50.000 0.00 0.00 41.67 3.53
4598 7676 3.718815 GCAAGTCGATCCTAAACCCTAG 58.281 50.000 0.00 0.00 0.00 3.02
4599 7677 3.718815 CAAGTCGATCCTAAACCCTAGC 58.281 50.000 0.00 0.00 0.00 3.42
4600 7678 2.317973 AGTCGATCCTAAACCCTAGCC 58.682 52.381 0.00 0.00 0.00 3.93
4601 7679 1.000496 GTCGATCCTAAACCCTAGCCG 60.000 57.143 0.00 0.00 0.00 5.52
4602 7680 0.319641 CGATCCTAAACCCTAGCCGC 60.320 60.000 0.00 0.00 0.00 6.53
4603 7681 0.035036 GATCCTAAACCCTAGCCGCC 59.965 60.000 0.00 0.00 0.00 6.13
4604 7682 1.755393 ATCCTAAACCCTAGCCGCCG 61.755 60.000 0.00 0.00 0.00 6.46
4605 7683 2.588034 CTAAACCCTAGCCGCCGC 60.588 66.667 0.00 0.00 0.00 6.53
4606 7684 4.165486 TAAACCCTAGCCGCCGCC 62.165 66.667 0.00 0.00 34.57 6.13
4651 7729 2.512515 GCAGTCGGCCTCCATGAC 60.513 66.667 0.00 0.00 36.11 3.06
4652 7730 2.187946 CAGTCGGCCTCCATGACC 59.812 66.667 0.00 0.00 33.09 4.02
4689 7767 4.344237 CCCGTACCTAGGGTTCGT 57.656 61.111 14.81 0.00 43.23 3.85
4690 7768 2.110296 CCCGTACCTAGGGTTCGTC 58.890 63.158 14.81 0.00 43.23 4.20
4691 7769 1.387295 CCCGTACCTAGGGTTCGTCC 61.387 65.000 14.81 0.00 43.23 4.79
4692 7770 1.718757 CCGTACCTAGGGTTCGTCCG 61.719 65.000 14.81 4.08 43.23 4.79
4693 7771 1.435105 GTACCTAGGGTTCGTCCGC 59.565 63.158 14.81 0.00 37.09 5.54
4694 7772 1.754234 TACCTAGGGTTCGTCCGCC 60.754 63.158 14.81 0.00 37.09 6.13
4695 7773 4.203076 CCTAGGGTTCGTCCGCCG 62.203 72.222 0.00 0.00 37.00 6.46
4696 7774 4.203076 CTAGGGTTCGTCCGCCGG 62.203 72.222 0.00 0.00 37.11 6.13
4722 7800 2.514824 GCCGGCTGCCCTAAAGAG 60.515 66.667 22.15 0.00 0.00 2.85
4723 7801 2.990479 CCGGCTGCCCTAAAGAGT 59.010 61.111 14.12 0.00 0.00 3.24
4724 7802 1.153349 CCGGCTGCCCTAAAGAGTC 60.153 63.158 14.12 0.00 0.00 3.36
4725 7803 1.617947 CCGGCTGCCCTAAAGAGTCT 61.618 60.000 14.12 0.00 0.00 3.24
4726 7804 0.250513 CGGCTGCCCTAAAGAGTCTT 59.749 55.000 14.12 0.00 0.00 3.01
4727 7805 1.339151 CGGCTGCCCTAAAGAGTCTTT 60.339 52.381 21.35 21.35 0.00 2.52
4728 7806 2.796557 GGCTGCCCTAAAGAGTCTTTT 58.203 47.619 22.66 7.93 0.00 2.27
4729 7807 3.157881 GGCTGCCCTAAAGAGTCTTTTT 58.842 45.455 22.66 2.80 0.00 1.94
4748 7826 2.325583 TTTCCGATCCTTTGATCCGG 57.674 50.000 0.00 0.00 43.82 5.14
4749 7827 0.468226 TTCCGATCCTTTGATCCGGG 59.532 55.000 0.00 0.00 43.82 5.73
4750 7828 0.689745 TCCGATCCTTTGATCCGGGT 60.690 55.000 0.00 0.00 43.82 5.28
4751 7829 0.180406 CCGATCCTTTGATCCGGGTT 59.820 55.000 0.00 0.00 43.82 4.11
4752 7830 1.408266 CCGATCCTTTGATCCGGGTTT 60.408 52.381 0.00 0.00 43.82 3.27
4753 7831 2.365582 CGATCCTTTGATCCGGGTTTT 58.634 47.619 0.00 0.00 43.82 2.43
4754 7832 2.354821 CGATCCTTTGATCCGGGTTTTC 59.645 50.000 0.00 0.00 43.82 2.29
4755 7833 3.621558 GATCCTTTGATCCGGGTTTTCT 58.378 45.455 0.00 0.00 41.37 2.52
4756 7834 3.067684 TCCTTTGATCCGGGTTTTCTC 57.932 47.619 0.00 0.00 0.00 2.87
4757 7835 2.642807 TCCTTTGATCCGGGTTTTCTCT 59.357 45.455 0.00 0.00 0.00 3.10
4758 7836 3.010420 CCTTTGATCCGGGTTTTCTCTC 58.990 50.000 0.00 0.00 0.00 3.20
4759 7837 3.307762 CCTTTGATCCGGGTTTTCTCTCT 60.308 47.826 0.00 0.00 0.00 3.10
4760 7838 3.611766 TTGATCCGGGTTTTCTCTCTC 57.388 47.619 0.00 0.00 0.00 3.20
4761 7839 2.821437 TGATCCGGGTTTTCTCTCTCT 58.179 47.619 0.00 0.00 0.00 3.10
4762 7840 2.761208 TGATCCGGGTTTTCTCTCTCTC 59.239 50.000 0.00 0.00 0.00 3.20
4763 7841 1.174783 TCCGGGTTTTCTCTCTCTCG 58.825 55.000 0.00 0.00 0.00 4.04
4764 7842 0.458716 CCGGGTTTTCTCTCTCTCGC 60.459 60.000 0.00 0.00 0.00 5.03
4765 7843 0.458716 CGGGTTTTCTCTCTCTCGCC 60.459 60.000 0.00 0.00 0.00 5.54
4766 7844 0.458716 GGGTTTTCTCTCTCTCGCCG 60.459 60.000 0.00 0.00 0.00 6.46
4767 7845 0.458716 GGTTTTCTCTCTCTCGCCGG 60.459 60.000 0.00 0.00 0.00 6.13
4768 7846 0.244178 GTTTTCTCTCTCTCGCCGGT 59.756 55.000 1.90 0.00 0.00 5.28
4769 7847 0.526662 TTTTCTCTCTCTCGCCGGTC 59.473 55.000 1.90 0.00 0.00 4.79
4770 7848 1.645704 TTTCTCTCTCTCGCCGGTCG 61.646 60.000 1.90 7.73 40.15 4.79
4771 7849 4.244802 CTCTCTCTCGCCGGTCGC 62.245 72.222 12.56 0.00 38.27 5.19
4772 7850 4.779966 TCTCTCTCGCCGGTCGCT 62.780 66.667 12.56 0.00 38.27 4.93
4773 7851 3.816524 CTCTCTCGCCGGTCGCTT 61.817 66.667 12.56 0.00 38.27 4.68
4774 7852 3.343788 CTCTCTCGCCGGTCGCTTT 62.344 63.158 12.56 0.00 38.27 3.51
4775 7853 3.181967 CTCTCGCCGGTCGCTTTG 61.182 66.667 12.56 4.45 38.27 2.77
4776 7854 3.626680 CTCTCGCCGGTCGCTTTGA 62.627 63.158 12.56 7.72 38.27 2.69
4777 7855 2.509336 CTCGCCGGTCGCTTTGAT 60.509 61.111 12.56 0.00 38.27 2.57
4778 7856 2.508439 TCGCCGGTCGCTTTGATC 60.508 61.111 12.56 0.00 38.27 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 4.870305 CGGATCCGTCATCGATCC 57.130 61.111 26.35 6.75 38.78 3.36
142 148 1.310933 GCATTCTCCAGTGCCCTGTG 61.311 60.000 0.00 0.00 36.95 3.66
162 168 2.357517 CGTCGGCAAGGCAGAGTT 60.358 61.111 0.00 0.00 32.90 3.01
167 173 4.243008 TTGGACGTCGGCAAGGCA 62.243 61.111 9.92 0.00 0.00 4.75
260 270 3.936203 GACACACCACGGGCCTCA 61.936 66.667 0.84 0.00 0.00 3.86
319 336 1.803922 CGTCTGGCATACGAACGCA 60.804 57.895 19.21 0.00 42.90 5.24
327 344 2.431454 ATGCGGTCCGTCTGGCATA 61.431 57.895 13.94 0.00 43.74 3.14
424 441 1.668151 GCTGCGTTCGGACTCCTTT 60.668 57.895 0.00 0.00 0.00 3.11
426 443 4.070552 GGCTGCGTTCGGACTCCT 62.071 66.667 0.00 0.00 0.00 3.69
486 503 2.444706 CCGAGGAGGAGATGGCCA 60.445 66.667 8.56 8.56 45.00 5.36
530 547 1.776662 TCCTTCACCTACAGATCCGG 58.223 55.000 0.00 0.00 0.00 5.14
550 567 4.235762 GCGGGCAGCGGATCCTAA 62.236 66.667 10.75 0.00 35.41 2.69
589 606 0.895530 CCCAAACTCGTCTCTGGCTA 59.104 55.000 0.00 0.00 0.00 3.93
617 635 1.547755 TCCCCTCCTCTCCACTCCT 60.548 63.158 0.00 0.00 0.00 3.69
627 645 1.920835 GCCACTTCACTCCCCTCCT 60.921 63.158 0.00 0.00 0.00 3.69
740 759 4.855599 CCCAAATAAGGGGTAGATATGGGA 59.144 45.833 0.67 0.00 46.32 4.37
755 775 3.075882 CCCCTCATATCCAGCCCAAATAA 59.924 47.826 0.00 0.00 0.00 1.40
798 819 1.215647 CCCCCTCAAACGACTCTCG 59.784 63.158 0.00 0.00 46.93 4.04
874 896 3.697045 CCTCAAACTCTCCTCATACGTCT 59.303 47.826 0.00 0.00 0.00 4.18
897 919 1.220749 GAGCATCTACAACCGGGCA 59.779 57.895 6.32 0.00 0.00 5.36
973 995 3.747854 TGATTTGTCCTTTGCATGCAA 57.252 38.095 28.80 28.80 0.00 4.08
1035 1057 2.990284 TGGGAAACAAGAAGATACCCCA 59.010 45.455 0.00 0.00 40.03 4.96
1052 1074 4.448720 TGCTAGCTACTGTACTATGGGA 57.551 45.455 17.23 0.00 0.00 4.37
1054 1076 6.210078 GTTCTTGCTAGCTACTGTACTATGG 58.790 44.000 17.23 0.00 0.00 2.74
1060 1082 2.764572 GGGGTTCTTGCTAGCTACTGTA 59.235 50.000 17.23 0.00 0.00 2.74
1062 1084 1.555075 TGGGGTTCTTGCTAGCTACTG 59.445 52.381 17.23 3.54 0.00 2.74
1145 1280 7.598493 TCAAGCTTTTAATACTTGTTTCATGCC 59.402 33.333 0.00 0.00 41.22 4.40
1158 1293 6.055588 CCGAATCCCTCTCAAGCTTTTAATA 58.944 40.000 0.00 0.00 0.00 0.98
1159 1294 4.884164 CCGAATCCCTCTCAAGCTTTTAAT 59.116 41.667 0.00 0.00 0.00 1.40
1160 1295 4.019681 TCCGAATCCCTCTCAAGCTTTTAA 60.020 41.667 0.00 0.00 0.00 1.52
1349 1492 1.511318 GCTCGCTCGATCTCCAGCTA 61.511 60.000 6.61 0.00 33.09 3.32
1350 1493 2.844451 GCTCGCTCGATCTCCAGCT 61.844 63.158 6.61 0.00 33.09 4.24
1374 1517 3.006859 ACTGGATGAACATGTTCGAGTCA 59.993 43.478 28.55 21.93 42.28 3.41
1438 1584 3.677648 CGGGAAGACGTGTCCGGT 61.678 66.667 0.00 0.00 38.93 5.28
1904 2062 2.564504 TGCTGAAGTGAGTGATGCTACT 59.435 45.455 0.00 0.00 0.00 2.57
1942 2105 1.867233 GAACTGCTGAAGTGAGCGAAA 59.133 47.619 0.00 0.00 42.32 3.46
1943 2106 1.202521 TGAACTGCTGAAGTGAGCGAA 60.203 47.619 0.00 0.00 42.32 4.70
1944 2107 0.389025 TGAACTGCTGAAGTGAGCGA 59.611 50.000 0.00 0.00 42.32 4.93
1945 2108 0.788995 CTGAACTGCTGAAGTGAGCG 59.211 55.000 0.00 0.00 42.32 5.03
1946 2109 1.876322 ACTGAACTGCTGAAGTGAGC 58.124 50.000 0.00 0.00 39.81 4.26
1947 2110 3.461061 TGAACTGAACTGCTGAAGTGAG 58.539 45.455 0.00 0.00 39.81 3.51
1948 2111 3.461061 CTGAACTGAACTGCTGAAGTGA 58.539 45.455 0.00 0.00 39.81 3.41
1949 2112 2.032204 GCTGAACTGAACTGCTGAAGTG 60.032 50.000 0.00 0.00 39.81 3.16
1950 2113 2.158842 AGCTGAACTGAACTGCTGAAGT 60.159 45.455 0.00 0.00 42.60 3.01
1951 2114 2.479656 GAGCTGAACTGAACTGCTGAAG 59.520 50.000 0.00 0.00 41.24 3.02
1952 2115 2.158914 TGAGCTGAACTGAACTGCTGAA 60.159 45.455 0.00 0.00 41.24 3.02
1953 2116 1.413812 TGAGCTGAACTGAACTGCTGA 59.586 47.619 0.00 0.00 41.24 4.26
1954 2117 1.799403 CTGAGCTGAACTGAACTGCTG 59.201 52.381 0.00 0.00 41.24 4.41
1955 2118 1.877258 GCTGAGCTGAACTGAACTGCT 60.877 52.381 0.00 0.00 43.16 4.24
1956 2119 0.516439 GCTGAGCTGAACTGAACTGC 59.484 55.000 0.00 0.00 0.00 4.40
1957 2120 1.875009 TGCTGAGCTGAACTGAACTG 58.125 50.000 5.83 0.00 0.00 3.16
1958 2121 2.812591 CAATGCTGAGCTGAACTGAACT 59.187 45.455 5.83 0.00 0.00 3.01
1959 2122 2.810274 TCAATGCTGAGCTGAACTGAAC 59.190 45.455 5.83 0.00 0.00 3.18
1960 2123 2.810274 GTCAATGCTGAGCTGAACTGAA 59.190 45.455 5.83 0.00 30.14 3.02
1961 2124 2.038164 AGTCAATGCTGAGCTGAACTGA 59.962 45.455 5.83 0.00 30.14 3.41
1962 2125 2.424557 AGTCAATGCTGAGCTGAACTG 58.575 47.619 5.83 0.00 30.14 3.16
1963 2126 2.855209 AGTCAATGCTGAGCTGAACT 57.145 45.000 5.83 1.25 30.14 3.01
1964 2127 5.362556 TTTTAGTCAATGCTGAGCTGAAC 57.637 39.130 5.83 0.00 30.14 3.18
1965 2128 7.686438 TTATTTTAGTCAATGCTGAGCTGAA 57.314 32.000 5.83 0.00 30.14 3.02
1966 2129 7.870509 ATTATTTTAGTCAATGCTGAGCTGA 57.129 32.000 5.83 0.00 30.14 4.26
1967 2130 8.922058 AAATTATTTTAGTCAATGCTGAGCTG 57.078 30.769 5.83 0.00 30.14 4.24
1968 2131 9.578439 GAAAATTATTTTAGTCAATGCTGAGCT 57.422 29.630 5.83 0.00 31.94 4.09
1969 2132 8.811378 GGAAAATTATTTTAGTCAATGCTGAGC 58.189 33.333 2.65 0.00 31.94 4.26
1970 2133 9.013490 CGGAAAATTATTTTAGTCAATGCTGAG 57.987 33.333 2.65 0.00 31.94 3.35
1971 2134 7.487829 GCGGAAAATTATTTTAGTCAATGCTGA 59.512 33.333 2.65 0.00 31.94 4.26
1972 2135 7.489113 AGCGGAAAATTATTTTAGTCAATGCTG 59.511 33.333 2.65 0.00 31.94 4.41
1973 2136 7.547227 AGCGGAAAATTATTTTAGTCAATGCT 58.453 30.769 2.65 3.17 31.94 3.79
1974 2137 7.487829 TGAGCGGAAAATTATTTTAGTCAATGC 59.512 33.333 2.65 1.18 31.94 3.56
1975 2138 8.909708 TGAGCGGAAAATTATTTTAGTCAATG 57.090 30.769 2.65 0.00 31.94 2.82
1976 2139 8.956426 TCTGAGCGGAAAATTATTTTAGTCAAT 58.044 29.630 2.65 0.00 31.94 2.57
1977 2140 8.330466 TCTGAGCGGAAAATTATTTTAGTCAA 57.670 30.769 2.65 0.00 31.94 3.18
1978 2141 7.915293 TCTGAGCGGAAAATTATTTTAGTCA 57.085 32.000 2.65 3.84 31.94 3.41
1979 2142 7.857885 CCATCTGAGCGGAAAATTATTTTAGTC 59.142 37.037 2.65 0.00 31.94 2.59
1980 2143 7.556275 TCCATCTGAGCGGAAAATTATTTTAGT 59.444 33.333 2.65 0.00 31.94 2.24
1981 2144 7.857885 GTCCATCTGAGCGGAAAATTATTTTAG 59.142 37.037 2.65 2.52 31.67 1.85
1982 2145 7.338196 TGTCCATCTGAGCGGAAAATTATTTTA 59.662 33.333 2.65 0.00 31.67 1.52
1983 2146 6.152661 TGTCCATCTGAGCGGAAAATTATTTT 59.847 34.615 2.23 2.23 31.67 1.82
2087 2252 2.329690 CCGAGTCGATGCTCCTCG 59.670 66.667 15.64 13.67 45.71 4.63
2373 2556 0.630673 ATGCCTTGGCCATGAGGTTA 59.369 50.000 22.07 13.40 37.19 2.85
2392 2575 3.449377 TGTGTAGAGTGAAGTGGTGAACA 59.551 43.478 0.00 0.00 0.00 3.18
2502 2686 7.062749 ACTAACTCTGTACCAAATGAAGACA 57.937 36.000 0.00 0.00 0.00 3.41
2558 2743 7.397892 TGACTTCACAAAATGTCACCTAAAA 57.602 32.000 0.00 0.00 34.94 1.52
2608 2795 2.303600 TGTACGGGCCACAAGTTATCTT 59.696 45.455 4.39 0.00 0.00 2.40
2665 2986 9.945904 CAAGTAAGGTAGTCCTCTAATTTTTCT 57.054 33.333 0.00 0.00 44.35 2.52
2666 2987 9.939802 TCAAGTAAGGTAGTCCTCTAATTTTTC 57.060 33.333 0.00 0.00 44.35 2.29
2667 2988 9.945904 CTCAAGTAAGGTAGTCCTCTAATTTTT 57.054 33.333 0.00 0.00 44.35 1.94
2668 2989 9.102453 ACTCAAGTAAGGTAGTCCTCTAATTTT 57.898 33.333 0.00 0.00 44.35 1.82
2669 2990 8.667592 ACTCAAGTAAGGTAGTCCTCTAATTT 57.332 34.615 0.00 0.00 44.35 1.82
2670 2991 8.532819 CAACTCAAGTAAGGTAGTCCTCTAATT 58.467 37.037 0.00 0.00 44.35 1.40
2671 2992 7.674772 ACAACTCAAGTAAGGTAGTCCTCTAAT 59.325 37.037 0.00 0.00 44.35 1.73
2672 2993 7.008941 ACAACTCAAGTAAGGTAGTCCTCTAA 58.991 38.462 0.00 0.00 44.35 2.10
2673 2994 6.550163 ACAACTCAAGTAAGGTAGTCCTCTA 58.450 40.000 0.00 0.00 44.35 2.43
2674 2995 5.395611 ACAACTCAAGTAAGGTAGTCCTCT 58.604 41.667 0.00 0.00 44.35 3.69
2675 2996 5.725325 ACAACTCAAGTAAGGTAGTCCTC 57.275 43.478 0.00 0.00 44.35 3.71
2736 3057 2.224426 TGCGTGTATGGGACTGTCTTTT 60.224 45.455 7.85 0.00 0.00 2.27
2744 3065 1.931172 GTGTATGTGCGTGTATGGGAC 59.069 52.381 0.00 0.00 0.00 4.46
2747 3068 2.887337 TGAGTGTATGTGCGTGTATGG 58.113 47.619 0.00 0.00 0.00 2.74
2783 3107 5.065218 AGCGTTGGTGCTCATATTTTTCTAG 59.935 40.000 0.00 0.00 42.95 2.43
2793 3122 1.276421 AGACTTAGCGTTGGTGCTCAT 59.724 47.619 0.00 0.00 45.87 2.90
2829 3162 2.063015 TTGTGATGGAACCAGCCCGT 62.063 55.000 6.64 0.00 0.00 5.28
2843 3176 5.877012 GCTCAGATGATTAGTTTCCTTGTGA 59.123 40.000 0.00 0.00 0.00 3.58
2955 3317 4.394729 TGGAGTGACTCAAAATTGGTACC 58.605 43.478 15.33 4.43 31.08 3.34
2956 3318 5.298276 TGTTGGAGTGACTCAAAATTGGTAC 59.702 40.000 15.33 0.00 31.08 3.34
3070 3432 9.667107 TCTCCGTCTCAAAATGTAAGATTATTT 57.333 29.630 0.00 0.00 0.00 1.40
3071 3433 9.319143 CTCTCCGTCTCAAAATGTAAGATTATT 57.681 33.333 0.00 0.00 0.00 1.40
3072 3434 8.696374 TCTCTCCGTCTCAAAATGTAAGATTAT 58.304 33.333 0.00 0.00 0.00 1.28
3073 3435 8.063200 TCTCTCCGTCTCAAAATGTAAGATTA 57.937 34.615 0.00 0.00 0.00 1.75
3074 3436 6.936279 TCTCTCCGTCTCAAAATGTAAGATT 58.064 36.000 0.00 0.00 0.00 2.40
3075 3437 6.531503 TCTCTCCGTCTCAAAATGTAAGAT 57.468 37.500 0.00 0.00 0.00 2.40
3076 3438 5.622460 GCTCTCTCCGTCTCAAAATGTAAGA 60.622 44.000 0.00 0.00 0.00 2.10
3077 3439 4.564769 GCTCTCTCCGTCTCAAAATGTAAG 59.435 45.833 0.00 0.00 0.00 2.34
3078 3440 4.021456 TGCTCTCTCCGTCTCAAAATGTAA 60.021 41.667 0.00 0.00 0.00 2.41
3079 3441 3.509967 TGCTCTCTCCGTCTCAAAATGTA 59.490 43.478 0.00 0.00 0.00 2.29
3080 3442 2.300152 TGCTCTCTCCGTCTCAAAATGT 59.700 45.455 0.00 0.00 0.00 2.71
3081 3443 2.670414 GTGCTCTCTCCGTCTCAAAATG 59.330 50.000 0.00 0.00 0.00 2.32
3082 3444 2.564947 AGTGCTCTCTCCGTCTCAAAAT 59.435 45.455 0.00 0.00 0.00 1.82
3083 3445 1.964223 AGTGCTCTCTCCGTCTCAAAA 59.036 47.619 0.00 0.00 0.00 2.44
3084 3446 1.621992 AGTGCTCTCTCCGTCTCAAA 58.378 50.000 0.00 0.00 0.00 2.69
3085 3447 1.621992 AAGTGCTCTCTCCGTCTCAA 58.378 50.000 0.00 0.00 0.00 3.02
3086 3448 2.491675 TAAGTGCTCTCTCCGTCTCA 57.508 50.000 0.00 0.00 0.00 3.27
3087 3449 5.457140 CATAATAAGTGCTCTCTCCGTCTC 58.543 45.833 0.00 0.00 0.00 3.36
3088 3450 4.279671 CCATAATAAGTGCTCTCTCCGTCT 59.720 45.833 0.00 0.00 0.00 4.18
3089 3451 4.278669 TCCATAATAAGTGCTCTCTCCGTC 59.721 45.833 0.00 0.00 0.00 4.79
3090 3452 4.215908 TCCATAATAAGTGCTCTCTCCGT 58.784 43.478 0.00 0.00 0.00 4.69
3091 3453 4.855715 TCCATAATAAGTGCTCTCTCCG 57.144 45.455 0.00 0.00 0.00 4.63
3092 3454 5.163301 TGGTTCCATAATAAGTGCTCTCTCC 60.163 44.000 0.00 0.00 0.00 3.71
3093 3455 5.755861 GTGGTTCCATAATAAGTGCTCTCTC 59.244 44.000 0.00 0.00 0.00 3.20
3094 3456 5.189736 TGTGGTTCCATAATAAGTGCTCTCT 59.810 40.000 0.00 0.00 0.00 3.10
3095 3457 5.428253 TGTGGTTCCATAATAAGTGCTCTC 58.572 41.667 0.00 0.00 0.00 3.20
3096 3458 5.431765 CTGTGGTTCCATAATAAGTGCTCT 58.568 41.667 0.00 0.00 0.00 4.09
3097 3459 4.035675 GCTGTGGTTCCATAATAAGTGCTC 59.964 45.833 0.00 0.00 0.00 4.26
3098 3460 3.947834 GCTGTGGTTCCATAATAAGTGCT 59.052 43.478 0.00 0.00 0.00 4.40
3099 3461 3.066760 GGCTGTGGTTCCATAATAAGTGC 59.933 47.826 0.00 0.00 0.00 4.40
3100 3462 4.269183 TGGCTGTGGTTCCATAATAAGTG 58.731 43.478 0.00 0.00 0.00 3.16
3101 3463 4.584638 TGGCTGTGGTTCCATAATAAGT 57.415 40.909 0.00 0.00 0.00 2.24
3107 3469 3.119319 TCCTTATGGCTGTGGTTCCATA 58.881 45.455 0.00 0.00 42.62 2.74
3108 3470 1.922447 TCCTTATGGCTGTGGTTCCAT 59.078 47.619 0.00 0.00 44.62 3.41
3109 3471 1.367346 TCCTTATGGCTGTGGTTCCA 58.633 50.000 0.00 0.00 36.70 3.53
3110 3472 2.507407 TTCCTTATGGCTGTGGTTCC 57.493 50.000 0.00 0.00 0.00 3.62
3111 3473 5.193679 AGTATTTCCTTATGGCTGTGGTTC 58.806 41.667 0.00 0.00 0.00 3.62
3112 3474 5.193099 AGTATTTCCTTATGGCTGTGGTT 57.807 39.130 0.00 0.00 0.00 3.67
3113 3475 4.862641 AGTATTTCCTTATGGCTGTGGT 57.137 40.909 0.00 0.00 0.00 4.16
3114 3476 7.206981 CATAAGTATTTCCTTATGGCTGTGG 57.793 40.000 11.36 0.00 45.44 4.17
3146 3509 4.641396 TCCAACTTTGTACCACTGATCAG 58.359 43.478 21.37 21.37 0.00 2.90
3153 3516 3.311596 GTGTGACTCCAACTTTGTACCAC 59.688 47.826 0.00 0.00 0.00 4.16
3204 3567 6.701145 AGATGCAGTTCGACTATCTTCTTA 57.299 37.500 0.00 0.00 0.00 2.10
3206 3569 5.590530 AAGATGCAGTTCGACTATCTTCT 57.409 39.130 0.00 0.00 31.34 2.85
3207 3570 9.632807 AATATAAGATGCAGTTCGACTATCTTC 57.367 33.333 12.38 5.82 35.93 2.87
3208 3571 9.416794 CAATATAAGATGCAGTTCGACTATCTT 57.583 33.333 13.06 13.06 37.33 2.40
3209 3572 8.580720 ACAATATAAGATGCAGTTCGACTATCT 58.419 33.333 0.00 0.00 27.67 1.98
3368 3754 2.221169 TCATTTGCCGCTATGATGTCC 58.779 47.619 5.09 0.00 0.00 4.02
3498 3893 2.221704 TAACTCACAATGCACGCGCG 62.222 55.000 30.96 30.96 42.97 6.86
3499 3894 0.789383 GTAACTCACAATGCACGCGC 60.789 55.000 5.73 0.00 39.24 6.86
3500 3895 0.510790 TGTAACTCACAATGCACGCG 59.489 50.000 3.53 3.53 32.95 6.01
3526 3921 1.673033 CCCGAGATTCACACTGGTCAC 60.673 57.143 0.00 0.00 0.00 3.67
3536 3931 1.003003 TGAACATGTGCCCGAGATTCA 59.997 47.619 0.00 0.00 0.00 2.57
3579 3974 0.037697 TGACACGTACAGATGCACCC 60.038 55.000 0.00 0.00 0.00 4.61
3621 4045 5.487433 TGAGAAAGATCCGACATGCTAAAA 58.513 37.500 0.00 0.00 0.00 1.52
3633 4057 4.133078 GGACCATGACATGAGAAAGATCC 58.867 47.826 17.24 7.81 0.00 3.36
3644 4149 3.649502 TCTAGCATGATGGACCATGACAT 59.350 43.478 12.99 7.29 44.98 3.06
3652 4157 5.070001 ACTACTCTCTCTAGCATGATGGAC 58.930 45.833 0.00 0.00 0.00 4.02
3731 4278 9.799106 AGGATTGTTGATTAAAGGTATATCCAG 57.201 33.333 0.00 0.00 39.02 3.86
3732 4279 9.793259 GAGGATTGTTGATTAAAGGTATATCCA 57.207 33.333 0.00 0.00 39.02 3.41
3761 4309 1.003812 CACCAAACCGAATGACCCCTA 59.996 52.381 0.00 0.00 0.00 3.53
3811 4359 8.800332 GCAAATGTCATCCTATCAAAATCCTAT 58.200 33.333 0.00 0.00 0.00 2.57
3830 4378 6.438425 AGTCAATTTCTTAGGATGGCAAATGT 59.562 34.615 0.00 0.00 0.00 2.71
3833 4381 6.690530 CAAGTCAATTTCTTAGGATGGCAAA 58.309 36.000 0.00 0.00 0.00 3.68
3837 4385 4.098501 GGGCAAGTCAATTTCTTAGGATGG 59.901 45.833 0.00 0.00 0.00 3.51
3841 4389 2.423538 CGGGGCAAGTCAATTTCTTAGG 59.576 50.000 0.00 0.00 0.00 2.69
3847 4395 2.316108 AGAAACGGGGCAAGTCAATTT 58.684 42.857 0.00 0.00 0.00 1.82
3860 4408 6.422776 AGCTCATTTTACACATAGAAACGG 57.577 37.500 0.00 0.00 0.00 4.44
3870 4418 3.572255 TCCACCCAAAGCTCATTTTACAC 59.428 43.478 0.00 0.00 0.00 2.90
3871 4419 3.838565 TCCACCCAAAGCTCATTTTACA 58.161 40.909 0.00 0.00 0.00 2.41
3872 4420 6.096846 ACATATCCACCCAAAGCTCATTTTAC 59.903 38.462 0.00 0.00 0.00 2.01
3882 4430 7.703058 AAGAAAACTACATATCCACCCAAAG 57.297 36.000 0.00 0.00 0.00 2.77
3926 4475 9.945904 TGTGTACATACATTTTGTAGGATTACA 57.054 29.630 0.00 3.41 36.82 2.41
3943 4492 9.733556 ATTCAGTTTGTAGGAAATGTGTACATA 57.266 29.630 0.00 0.00 35.10 2.29
3950 4499 6.435277 AGATGCATTCAGTTTGTAGGAAATGT 59.565 34.615 0.00 0.00 0.00 2.71
4001 4550 8.674607 GGATTGTCGTAGGAAAAACATAGAAAT 58.325 33.333 0.00 0.00 0.00 2.17
4022 4571 2.101582 CCTAGTTCGGTCTGGAGGATTG 59.898 54.545 0.00 0.00 0.00 2.67
4032 4581 3.064958 GCAATTTTAGGCCTAGTTCGGTC 59.935 47.826 13.36 0.00 0.00 4.79
4050 5556 1.891150 CCTTTCTGCAGACAAGGCAAT 59.109 47.619 28.86 0.00 41.39 3.56
4155 7218 3.210232 TGACTAGGAGAGTGTATCCGG 57.790 52.381 0.00 0.00 42.02 5.14
4159 7222 4.861196 TCTGCTTGACTAGGAGAGTGTAT 58.139 43.478 4.10 0.00 45.27 2.29
4173 7236 2.044555 GCATGCCAGCTCTGCTTGA 61.045 57.895 19.26 0.00 36.40 3.02
4241 7304 3.186047 CGTGTCCGTGAATCGCCC 61.186 66.667 0.00 0.00 38.35 6.13
4281 7348 4.007644 TGCGAGGTGCCACAGAGG 62.008 66.667 0.00 0.00 45.60 3.69
4349 7425 1.469703 TGCATGACCGCTTTCAATCAG 59.530 47.619 0.00 0.00 0.00 2.90
4374 7450 4.828925 GGCGAGTCAGCTGAGCCC 62.829 72.222 27.20 16.94 38.45 5.19
4409 7487 8.046294 ACTCAACACACACTACAAAATTTACA 57.954 30.769 0.00 0.00 0.00 2.41
4453 7531 9.086758 GCCTTGTATATTTCCTAGTCTAACCTA 57.913 37.037 0.00 0.00 0.00 3.08
4454 7532 7.016366 GGCCTTGTATATTTCCTAGTCTAACCT 59.984 40.741 0.00 0.00 0.00 3.50
4455 7533 7.016366 AGGCCTTGTATATTTCCTAGTCTAACC 59.984 40.741 0.00 0.00 0.00 2.85
4456 7534 7.964624 AGGCCTTGTATATTTCCTAGTCTAAC 58.035 38.462 0.00 0.00 0.00 2.34
4457 7535 8.429641 CAAGGCCTTGTATATTTCCTAGTCTAA 58.570 37.037 33.46 0.00 35.92 2.10
4458 7536 7.963532 CAAGGCCTTGTATATTTCCTAGTCTA 58.036 38.462 33.46 0.00 35.92 2.59
4459 7537 6.831976 CAAGGCCTTGTATATTTCCTAGTCT 58.168 40.000 33.46 0.00 35.92 3.24
4506 7584 0.107703 TATTGCTTGAGCCTCGTGGG 60.108 55.000 5.54 0.00 41.18 4.61
4507 7585 1.009829 GTATTGCTTGAGCCTCGTGG 58.990 55.000 0.00 0.00 41.18 4.94
4508 7586 1.725641 TGTATTGCTTGAGCCTCGTG 58.274 50.000 0.00 0.00 41.18 4.35
4509 7587 2.076863 GTTGTATTGCTTGAGCCTCGT 58.923 47.619 0.00 0.00 41.18 4.18
4510 7588 1.061131 CGTTGTATTGCTTGAGCCTCG 59.939 52.381 0.00 0.00 41.18 4.63
4511 7589 2.346803 TCGTTGTATTGCTTGAGCCTC 58.653 47.619 0.00 0.00 41.18 4.70
4512 7590 2.472695 TCGTTGTATTGCTTGAGCCT 57.527 45.000 0.00 0.00 41.18 4.58
4513 7591 2.484264 AGTTCGTTGTATTGCTTGAGCC 59.516 45.455 0.00 0.00 41.18 4.70
4514 7592 3.813529 AGTTCGTTGTATTGCTTGAGC 57.186 42.857 0.00 0.00 42.50 4.26
4515 7593 7.295952 AGAATAGTTCGTTGTATTGCTTGAG 57.704 36.000 0.00 0.00 34.02 3.02
4516 7594 8.942338 ATAGAATAGTTCGTTGTATTGCTTGA 57.058 30.769 0.00 0.00 34.02 3.02
4517 7595 8.817100 TGATAGAATAGTTCGTTGTATTGCTTG 58.183 33.333 0.00 0.00 34.02 4.01
4518 7596 8.942338 TGATAGAATAGTTCGTTGTATTGCTT 57.058 30.769 0.00 0.00 34.02 3.91
4519 7597 8.942338 TTGATAGAATAGTTCGTTGTATTGCT 57.058 30.769 0.00 0.00 34.02 3.91
4520 7598 9.798885 GATTGATAGAATAGTTCGTTGTATTGC 57.201 33.333 0.00 0.00 34.02 3.56
4525 7603 9.099454 GAAAGGATTGATAGAATAGTTCGTTGT 57.901 33.333 0.00 0.00 34.02 3.32
4526 7604 9.319143 AGAAAGGATTGATAGAATAGTTCGTTG 57.681 33.333 0.00 0.00 34.02 4.10
4527 7605 9.535878 GAGAAAGGATTGATAGAATAGTTCGTT 57.464 33.333 0.00 0.00 34.02 3.85
4528 7606 8.919145 AGAGAAAGGATTGATAGAATAGTTCGT 58.081 33.333 0.00 0.00 34.02 3.85
4529 7607 9.405587 GAGAGAAAGGATTGATAGAATAGTTCG 57.594 37.037 0.00 0.00 34.02 3.95
4530 7608 9.705290 GGAGAGAAAGGATTGATAGAATAGTTC 57.295 37.037 0.00 0.00 0.00 3.01
4531 7609 9.445973 AGGAGAGAAAGGATTGATAGAATAGTT 57.554 33.333 0.00 0.00 0.00 2.24
4532 7610 9.445973 AAGGAGAGAAAGGATTGATAGAATAGT 57.554 33.333 0.00 0.00 0.00 2.12
4535 7613 9.002061 AGAAAGGAGAGAAAGGATTGATAGAAT 57.998 33.333 0.00 0.00 0.00 2.40
4536 7614 8.386012 AGAAAGGAGAGAAAGGATTGATAGAA 57.614 34.615 0.00 0.00 0.00 2.10
4537 7615 7.986553 AGAAAGGAGAGAAAGGATTGATAGA 57.013 36.000 0.00 0.00 0.00 1.98
4538 7616 9.541143 GTTAGAAAGGAGAGAAAGGATTGATAG 57.459 37.037 0.00 0.00 0.00 2.08
4539 7617 9.046846 TGTTAGAAAGGAGAGAAAGGATTGATA 57.953 33.333 0.00 0.00 0.00 2.15
4540 7618 7.922382 TGTTAGAAAGGAGAGAAAGGATTGAT 58.078 34.615 0.00 0.00 0.00 2.57
4541 7619 7.316393 TGTTAGAAAGGAGAGAAAGGATTGA 57.684 36.000 0.00 0.00 0.00 2.57
4542 7620 7.066766 CCATGTTAGAAAGGAGAGAAAGGATTG 59.933 40.741 0.00 0.00 0.00 2.67
4543 7621 7.115414 CCATGTTAGAAAGGAGAGAAAGGATT 58.885 38.462 0.00 0.00 0.00 3.01
4544 7622 6.216456 ACCATGTTAGAAAGGAGAGAAAGGAT 59.784 38.462 0.00 0.00 0.00 3.24
4545 7623 5.548056 ACCATGTTAGAAAGGAGAGAAAGGA 59.452 40.000 0.00 0.00 0.00 3.36
4546 7624 5.810095 ACCATGTTAGAAAGGAGAGAAAGG 58.190 41.667 0.00 0.00 0.00 3.11
4547 7625 9.454859 AAATACCATGTTAGAAAGGAGAGAAAG 57.545 33.333 0.00 0.00 0.00 2.62
4551 7629 9.197694 CGATAAATACCATGTTAGAAAGGAGAG 57.802 37.037 0.00 0.00 0.00 3.20
4552 7630 7.656137 GCGATAAATACCATGTTAGAAAGGAGA 59.344 37.037 0.00 0.00 0.00 3.71
4553 7631 7.441157 TGCGATAAATACCATGTTAGAAAGGAG 59.559 37.037 0.00 0.00 0.00 3.69
4554 7632 7.276658 TGCGATAAATACCATGTTAGAAAGGA 58.723 34.615 0.00 0.00 0.00 3.36
4555 7633 7.490962 TGCGATAAATACCATGTTAGAAAGG 57.509 36.000 0.00 0.00 0.00 3.11
4556 7634 8.612619 ACTTGCGATAAATACCATGTTAGAAAG 58.387 33.333 0.00 0.00 0.00 2.62
4557 7635 8.500753 ACTTGCGATAAATACCATGTTAGAAA 57.499 30.769 0.00 0.00 0.00 2.52
4558 7636 7.042992 CGACTTGCGATAAATACCATGTTAGAA 60.043 37.037 0.00 0.00 44.57 2.10
4559 7637 6.419710 CGACTTGCGATAAATACCATGTTAGA 59.580 38.462 0.00 0.00 44.57 2.10
4560 7638 6.419710 TCGACTTGCGATAAATACCATGTTAG 59.580 38.462 0.00 0.00 45.59 2.34
4561 7639 6.274579 TCGACTTGCGATAAATACCATGTTA 58.725 36.000 0.00 0.00 45.59 2.41
4562 7640 5.113383 TCGACTTGCGATAAATACCATGTT 58.887 37.500 0.00 0.00 45.59 2.71
4563 7641 4.689071 TCGACTTGCGATAAATACCATGT 58.311 39.130 0.00 0.00 45.59 3.21
4576 7654 1.134788 AGGGTTTAGGATCGACTTGCG 60.135 52.381 0.00 0.00 42.69 4.85
4577 7655 2.693267 AGGGTTTAGGATCGACTTGC 57.307 50.000 0.00 0.00 0.00 4.01
4578 7656 3.492829 GGCTAGGGTTTAGGATCGACTTG 60.493 52.174 0.00 0.00 0.00 3.16
4579 7657 2.699321 GGCTAGGGTTTAGGATCGACTT 59.301 50.000 0.00 0.00 0.00 3.01
4580 7658 2.317973 GGCTAGGGTTTAGGATCGACT 58.682 52.381 0.00 0.00 0.00 4.18
4581 7659 1.000496 CGGCTAGGGTTTAGGATCGAC 60.000 57.143 0.00 0.00 0.00 4.20
4582 7660 1.325355 CGGCTAGGGTTTAGGATCGA 58.675 55.000 0.00 0.00 0.00 3.59
4583 7661 0.319641 GCGGCTAGGGTTTAGGATCG 60.320 60.000 0.00 0.00 0.00 3.69
4584 7662 0.035036 GGCGGCTAGGGTTTAGGATC 59.965 60.000 0.00 0.00 0.00 3.36
4585 7663 1.755393 CGGCGGCTAGGGTTTAGGAT 61.755 60.000 7.61 0.00 0.00 3.24
4586 7664 2.428925 CGGCGGCTAGGGTTTAGGA 61.429 63.158 7.61 0.00 0.00 2.94
4587 7665 2.108362 CGGCGGCTAGGGTTTAGG 59.892 66.667 7.61 0.00 0.00 2.69
4588 7666 2.588034 GCGGCGGCTAGGGTTTAG 60.588 66.667 9.78 0.00 35.83 1.85
4589 7667 4.165486 GGCGGCGGCTAGGGTTTA 62.165 66.667 27.22 0.00 39.81 2.01
4634 7712 2.512515 GTCATGGAGGCCGACTGC 60.513 66.667 0.00 0.00 38.16 4.40
4635 7713 2.187946 GGTCATGGAGGCCGACTG 59.812 66.667 0.00 0.00 28.17 3.51
4669 7747 2.761213 AACCCTAGGTACGGGCGG 60.761 66.667 8.29 0.00 46.04 6.13
4670 7748 2.810403 GAACCCTAGGTACGGGCG 59.190 66.667 8.29 0.00 46.04 6.13
4671 7749 2.009424 GACGAACCCTAGGTACGGGC 62.009 65.000 18.63 9.95 46.04 6.13
4673 7751 1.718757 CGGACGAACCCTAGGTACGG 61.719 65.000 18.63 3.39 33.12 4.02
4674 7752 1.723870 CGGACGAACCCTAGGTACG 59.276 63.158 8.29 12.32 33.12 3.67
4675 7753 1.435105 GCGGACGAACCCTAGGTAC 59.565 63.158 8.29 0.00 33.12 3.34
4676 7754 1.754234 GGCGGACGAACCCTAGGTA 60.754 63.158 8.29 0.00 33.12 3.08
4677 7755 3.073101 GGCGGACGAACCCTAGGT 61.073 66.667 8.29 0.00 37.65 3.08
4705 7783 2.514824 CTCTTTAGGGCAGCCGGC 60.515 66.667 21.89 21.89 43.74 6.13
4706 7784 1.153349 GACTCTTTAGGGCAGCCGG 60.153 63.158 5.00 0.00 0.00 6.13
4707 7785 0.250513 AAGACTCTTTAGGGCAGCCG 59.749 55.000 5.00 0.00 0.00 5.52
4708 7786 2.498644 AAAGACTCTTTAGGGCAGCC 57.501 50.000 1.26 1.26 0.00 4.85
4735 7813 3.267031 AGAGAAAACCCGGATCAAAGGAT 59.733 43.478 0.73 0.00 36.13 3.24
4736 7814 2.642807 AGAGAAAACCCGGATCAAAGGA 59.357 45.455 0.73 0.00 0.00 3.36
4737 7815 3.010420 GAGAGAAAACCCGGATCAAAGG 58.990 50.000 0.73 0.00 0.00 3.11
4738 7816 3.935828 GAGAGAGAAAACCCGGATCAAAG 59.064 47.826 0.73 0.00 0.00 2.77
4739 7817 3.583086 AGAGAGAGAAAACCCGGATCAAA 59.417 43.478 0.73 0.00 0.00 2.69
4740 7818 3.173965 AGAGAGAGAAAACCCGGATCAA 58.826 45.455 0.73 0.00 0.00 2.57
4741 7819 2.761208 GAGAGAGAGAAAACCCGGATCA 59.239 50.000 0.73 0.00 0.00 2.92
4742 7820 2.223618 CGAGAGAGAGAAAACCCGGATC 60.224 54.545 0.73 0.00 0.00 3.36
4743 7821 1.751924 CGAGAGAGAGAAAACCCGGAT 59.248 52.381 0.73 0.00 0.00 4.18
4744 7822 1.174783 CGAGAGAGAGAAAACCCGGA 58.825 55.000 0.73 0.00 0.00 5.14
4745 7823 0.458716 GCGAGAGAGAGAAAACCCGG 60.459 60.000 0.00 0.00 0.00 5.73
4746 7824 0.458716 GGCGAGAGAGAGAAAACCCG 60.459 60.000 0.00 0.00 0.00 5.28
4747 7825 0.458716 CGGCGAGAGAGAGAAAACCC 60.459 60.000 0.00 0.00 0.00 4.11
4748 7826 0.458716 CCGGCGAGAGAGAGAAAACC 60.459 60.000 9.30 0.00 0.00 3.27
4749 7827 0.244178 ACCGGCGAGAGAGAGAAAAC 59.756 55.000 9.30 0.00 0.00 2.43
4750 7828 0.526662 GACCGGCGAGAGAGAGAAAA 59.473 55.000 9.30 0.00 0.00 2.29
4751 7829 1.645704 CGACCGGCGAGAGAGAGAAA 61.646 60.000 9.30 0.00 44.57 2.52
4752 7830 2.107292 CGACCGGCGAGAGAGAGAA 61.107 63.158 9.30 0.00 44.57 2.87
4753 7831 2.511829 CGACCGGCGAGAGAGAGA 60.512 66.667 9.30 0.00 44.57 3.10
4754 7832 4.244802 GCGACCGGCGAGAGAGAG 62.245 72.222 20.06 0.00 44.57 3.20
4763 7841 3.564027 CCGATCAAAGCGACCGGC 61.564 66.667 0.00 0.00 44.05 6.13
4764 7842 3.564027 GCCGATCAAAGCGACCGG 61.564 66.667 0.00 0.00 42.74 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.