Multiple sequence alignment - TraesCS5D01G516200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G516200 chr5D 100.000 3544 0 0 1 3544 538790807 538787264 0.000000e+00 6545.0
1 TraesCS5D01G516200 chr5D 84.516 620 95 1 1629 2247 388878 388259 2.340000e-171 612.0
2 TraesCS5D01G516200 chr5D 99.174 121 1 0 343 463 538790426 538790306 5.960000e-53 219.0
3 TraesCS5D01G516200 chr5D 99.174 121 1 0 382 502 538790465 538790345 5.960000e-53 219.0
4 TraesCS5D01G516200 chr5D 97.561 82 2 0 343 424 538790387 538790306 1.330000e-29 141.0
5 TraesCS5D01G516200 chr5D 97.561 82 2 0 421 502 538790465 538790384 1.330000e-29 141.0
6 TraesCS5D01G516200 chr4A 93.503 2078 62 31 421 2434 629858263 629860331 0.000000e+00 3022.0
7 TraesCS5D01G516200 chr4A 88.718 780 45 20 2445 3217 629860315 629861058 0.000000e+00 913.0
8 TraesCS5D01G516200 chr4A 81.172 239 28 10 232 463 629858116 629858344 3.640000e-40 176.0
9 TraesCS5D01G516200 chr4A 97.895 95 2 0 330 424 629858250 629858344 7.870000e-37 165.0
10 TraesCS5D01G516200 chr4A 100.000 34 0 0 156 189 629858537 629858570 2.950000e-06 63.9
11 TraesCS5D01G516200 chr4A 97.143 35 1 0 201 235 325982958 325982992 3.820000e-05 60.2
12 TraesCS5D01G516200 chr5B 94.028 1959 57 25 530 2433 680361167 680359214 0.000000e+00 2915.0
13 TraesCS5D01G516200 chr5B 85.072 623 35 28 2445 3039 680359229 680358637 1.830000e-162 582.0
14 TraesCS5D01G516200 chr5B 88.415 164 12 3 3 159 680361710 680361547 1.300000e-44 191.0
15 TraesCS5D01G516200 chr5B 96.809 94 3 0 445 538 680361409 680361316 1.320000e-34 158.0
16 TraesCS5D01G516200 chr5B 88.298 94 4 5 335 424 680361442 680361352 4.840000e-19 106.0
17 TraesCS5D01G516200 chr5B 100.000 54 0 0 410 463 680361405 680361352 2.250000e-17 100.0
18 TraesCS5D01G516200 chr5B 95.122 41 2 0 156 196 680361002 680360962 8.210000e-07 65.8
19 TraesCS5D01G516200 chr5A 79.055 1079 212 13 1174 2247 228191 229260 0.000000e+00 728.0
20 TraesCS5D01G516200 chr5A 84.355 620 96 1 1629 2247 229718 230337 1.090000e-169 606.0
21 TraesCS5D01G516200 chr5A 92.857 42 3 0 200 241 665078702 665078661 1.060000e-05 62.1
22 TraesCS5D01G516200 chr1A 85.554 623 90 0 1629 2251 10068027 10068649 0.000000e+00 652.0
23 TraesCS5D01G516200 chr1A 84.000 400 64 0 1141 1540 10067342 10067741 5.550000e-103 385.0
24 TraesCS5D01G516200 chr1A 100.000 34 0 0 200 233 495704642 495704609 2.950000e-06 63.9
25 TraesCS5D01G516200 chrUn 84.355 620 96 1 1629 2247 454677304 454676685 1.090000e-169 606.0
26 TraesCS5D01G516200 chr1B 84.194 620 96 2 1632 2250 360808768 360809386 5.060000e-168 601.0
27 TraesCS5D01G516200 chr1B 84.750 400 61 0 1141 1540 11858381 11858780 5.510000e-108 401.0
28 TraesCS5D01G516200 chr1D 83.871 620 98 2 1632 2250 252528696 252528078 1.100000e-164 590.0
29 TraesCS5D01G516200 chr1D 85.250 400 59 0 1141 1540 8712948 8713347 2.550000e-111 412.0
30 TraesCS5D01G516200 chr1D 97.222 36 1 0 200 235 365544003 365543968 1.060000e-05 62.1
31 TraesCS5D01G516200 chr2D 97.368 38 1 0 200 237 17068410 17068447 8.210000e-07 65.8
32 TraesCS5D01G516200 chr6B 95.000 40 2 0 200 239 609386033 609385994 2.950000e-06 63.9
33 TraesCS5D01G516200 chr6B 100.000 33 0 0 201 233 42421795 42421827 1.060000e-05 62.1
34 TraesCS5D01G516200 chr2B 93.023 43 3 0 191 233 522090589 522090631 2.950000e-06 63.9
35 TraesCS5D01G516200 chr3A 97.222 36 1 0 200 235 54878242 54878207 1.060000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G516200 chr5D 538787264 538790807 3543 True 1453.000000 6545 98.694000 1 3544 5 chr5D.!!$R2 3543
1 TraesCS5D01G516200 chr5D 388259 388878 619 True 612.000000 612 84.516000 1629 2247 1 chr5D.!!$R1 618
2 TraesCS5D01G516200 chr4A 629858116 629861058 2942 False 867.980000 3022 92.257600 156 3217 5 chr4A.!!$F2 3061
3 TraesCS5D01G516200 chr5B 680358637 680361710 3073 True 588.257143 2915 92.534857 3 3039 7 chr5B.!!$R1 3036
4 TraesCS5D01G516200 chr5A 228191 230337 2146 False 667.000000 728 81.705000 1174 2247 2 chr5A.!!$F1 1073
5 TraesCS5D01G516200 chr1A 10067342 10068649 1307 False 518.500000 652 84.777000 1141 2251 2 chr1A.!!$F1 1110
6 TraesCS5D01G516200 chrUn 454676685 454677304 619 True 606.000000 606 84.355000 1629 2247 1 chrUn.!!$R1 618
7 TraesCS5D01G516200 chr1B 360808768 360809386 618 False 601.000000 601 84.194000 1632 2250 1 chr1B.!!$F2 618
8 TraesCS5D01G516200 chr1D 252528078 252528696 618 True 590.000000 590 83.871000 1632 2250 1 chr1D.!!$R1 618

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
294 302 1.069765 CGGCACAGAACCTCAGTGT 59.930 57.895 0.0 0.0 36.43 3.55 F
1676 2127 0.036010 GTGTGAGCCATACTGTGCCT 60.036 55.000 0.0 0.0 0.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2111 2562 0.035725 CCTTGCTCATCCTGTCTGCA 60.036 55.0 0.0 0.0 0.0 4.41 R
3318 3823 0.033601 ACCAAGTTGCCTGGACACAA 60.034 50.0 0.0 0.0 0.0 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 37 7.548075 TGCTATATGTGCACATCATCATTCTAG 59.452 37.037 34.54 20.70 37.76 2.43
37 40 4.193865 TGTGCACATCATCATTCTAGTGG 58.806 43.478 17.42 0.00 0.00 4.00
73 81 8.729805 TGCTATGTATGATGTTTGATTGTGTA 57.270 30.769 0.00 0.00 0.00 2.90
85 93 8.932945 TGTTTGATTGTGTATACTCTGATCTC 57.067 34.615 4.17 5.46 0.00 2.75
108 116 4.142902 CGTGGTCTTACAATGGTTCATGTC 60.143 45.833 0.00 0.00 0.00 3.06
113 121 6.183360 GGTCTTACAATGGTTCATGTCTTACG 60.183 42.308 0.00 0.00 0.00 3.18
139 147 6.019779 ACGCACCAATTTTTAGCTTAATCA 57.980 33.333 0.00 0.00 0.00 2.57
172 180 9.294030 CTGTCTGATATTTTGATTAGTTTTGCC 57.706 33.333 0.00 0.00 0.00 4.52
173 181 8.801299 TGTCTGATATTTTGATTAGTTTTGCCA 58.199 29.630 0.00 0.00 0.00 4.92
174 182 9.294030 GTCTGATATTTTGATTAGTTTTGCCAG 57.706 33.333 0.00 0.00 0.00 4.85
175 183 7.975616 TCTGATATTTTGATTAGTTTTGCCAGC 59.024 33.333 0.00 0.00 0.00 4.85
176 184 7.041107 TGATATTTTGATTAGTTTTGCCAGCC 58.959 34.615 0.00 0.00 0.00 4.85
177 185 4.953940 TTTTGATTAGTTTTGCCAGCCT 57.046 36.364 0.00 0.00 0.00 4.58
178 186 6.603940 ATTTTGATTAGTTTTGCCAGCCTA 57.396 33.333 0.00 0.00 0.00 3.93
179 187 5.385509 TTTGATTAGTTTTGCCAGCCTAC 57.614 39.130 0.00 0.00 0.00 3.18
180 188 4.301072 TGATTAGTTTTGCCAGCCTACT 57.699 40.909 0.00 0.00 0.00 2.57
181 189 4.662278 TGATTAGTTTTGCCAGCCTACTT 58.338 39.130 0.00 0.00 0.00 2.24
182 190 5.076873 TGATTAGTTTTGCCAGCCTACTTT 58.923 37.500 0.00 0.00 0.00 2.66
183 191 5.538433 TGATTAGTTTTGCCAGCCTACTTTT 59.462 36.000 0.00 0.00 0.00 2.27
184 192 6.717540 TGATTAGTTTTGCCAGCCTACTTTTA 59.282 34.615 0.00 0.00 0.00 1.52
185 193 7.396055 TGATTAGTTTTGCCAGCCTACTTTTAT 59.604 33.333 0.00 0.00 0.00 1.40
186 194 5.644977 AGTTTTGCCAGCCTACTTTTATC 57.355 39.130 0.00 0.00 0.00 1.75
187 195 4.462834 AGTTTTGCCAGCCTACTTTTATCC 59.537 41.667 0.00 0.00 0.00 2.59
188 196 3.730215 TTGCCAGCCTACTTTTATCCA 57.270 42.857 0.00 0.00 0.00 3.41
189 197 3.951563 TGCCAGCCTACTTTTATCCAT 57.048 42.857 0.00 0.00 0.00 3.41
190 198 4.249638 TGCCAGCCTACTTTTATCCATT 57.750 40.909 0.00 0.00 0.00 3.16
191 199 5.381184 TGCCAGCCTACTTTTATCCATTA 57.619 39.130 0.00 0.00 0.00 1.90
192 200 5.761205 TGCCAGCCTACTTTTATCCATTAA 58.239 37.500 0.00 0.00 0.00 1.40
193 201 6.191315 TGCCAGCCTACTTTTATCCATTAAA 58.809 36.000 0.00 0.00 0.00 1.52
194 202 6.096282 TGCCAGCCTACTTTTATCCATTAAAC 59.904 38.462 0.00 0.00 29.47 2.01
195 203 6.321435 GCCAGCCTACTTTTATCCATTAAACT 59.679 38.462 0.00 0.00 29.47 2.66
196 204 7.501225 GCCAGCCTACTTTTATCCATTAAACTA 59.499 37.037 0.00 0.00 29.47 2.24
197 205 9.403583 CCAGCCTACTTTTATCCATTAAACTAA 57.596 33.333 0.00 0.00 29.47 2.24
282 290 3.308595 CGTTAATTGAATAGCTCGGCACA 59.691 43.478 0.00 0.00 0.00 4.57
284 292 2.988010 ATTGAATAGCTCGGCACAGA 57.012 45.000 0.00 0.00 0.00 3.41
294 302 1.069765 CGGCACAGAACCTCAGTGT 59.930 57.895 0.00 0.00 36.43 3.55
299 307 1.134401 CACAGAACCTCAGTGTGTGGT 60.134 52.381 2.23 0.00 45.22 4.16
305 313 3.470645 ACCTCAGTGTGTGGTTCTTAC 57.529 47.619 0.00 0.00 41.00 2.34
378 429 9.930693 AATGTTGATTTATAGCTAGTACTAGGC 57.069 33.333 27.24 19.80 33.87 3.93
379 430 8.707796 TGTTGATTTATAGCTAGTACTAGGCT 57.292 34.615 27.24 24.36 33.87 4.58
380 431 8.577296 TGTTGATTTATAGCTAGTACTAGGCTG 58.423 37.037 27.24 7.21 33.87 4.85
381 432 7.704578 TGATTTATAGCTAGTACTAGGCTGG 57.295 40.000 27.24 6.86 33.87 4.85
382 433 7.467650 TGATTTATAGCTAGTACTAGGCTGGA 58.532 38.462 27.24 15.05 33.87 3.86
383 434 8.116669 TGATTTATAGCTAGTACTAGGCTGGAT 58.883 37.037 27.24 17.78 33.87 3.41
384 435 7.704578 TTTATAGCTAGTACTAGGCTGGATG 57.295 40.000 27.24 4.81 33.87 3.51
385 436 3.885976 AGCTAGTACTAGGCTGGATGA 57.114 47.619 27.24 0.00 33.87 2.92
386 437 3.492337 AGCTAGTACTAGGCTGGATGAC 58.508 50.000 27.24 10.32 33.87 3.06
387 438 3.139397 AGCTAGTACTAGGCTGGATGACT 59.861 47.826 27.24 12.18 37.97 3.41
388 439 4.351407 AGCTAGTACTAGGCTGGATGACTA 59.649 45.833 27.24 8.14 34.56 2.59
389 440 5.071370 GCTAGTACTAGGCTGGATGACTAA 58.929 45.833 27.24 0.00 35.52 2.24
390 441 5.535406 GCTAGTACTAGGCTGGATGACTAAA 59.465 44.000 27.24 0.00 35.52 1.85
391 442 6.040616 GCTAGTACTAGGCTGGATGACTAAAA 59.959 42.308 27.24 0.00 35.52 1.52
392 443 6.869206 AGTACTAGGCTGGATGACTAAAAA 57.131 37.500 4.33 0.00 35.52 1.94
393 444 7.439108 AGTACTAGGCTGGATGACTAAAAAT 57.561 36.000 4.33 0.00 35.52 1.82
394 445 7.275920 AGTACTAGGCTGGATGACTAAAAATG 58.724 38.462 4.33 0.00 35.52 2.32
395 446 6.067217 ACTAGGCTGGATGACTAAAAATGT 57.933 37.500 4.33 0.00 35.52 2.71
396 447 6.485171 ACTAGGCTGGATGACTAAAAATGTT 58.515 36.000 4.33 0.00 35.52 2.71
397 448 5.649782 AGGCTGGATGACTAAAAATGTTG 57.350 39.130 0.00 0.00 27.54 3.33
398 449 5.324409 AGGCTGGATGACTAAAAATGTTGA 58.676 37.500 0.00 0.00 27.54 3.18
399 450 5.954150 AGGCTGGATGACTAAAAATGTTGAT 59.046 36.000 0.00 0.00 27.54 2.57
400 451 6.438425 AGGCTGGATGACTAAAAATGTTGATT 59.562 34.615 0.00 0.00 27.54 2.57
401 452 7.038799 AGGCTGGATGACTAAAAATGTTGATTT 60.039 33.333 0.00 0.00 29.11 2.17
402 453 8.250332 GGCTGGATGACTAAAAATGTTGATTTA 58.750 33.333 0.00 0.00 31.18 1.40
403 454 9.807649 GCTGGATGACTAAAAATGTTGATTTAT 57.192 29.630 0.00 0.00 31.18 1.40
459 510 9.694137 GTTGATTTATAACTAGTACTAGGCTGG 57.306 37.037 29.05 9.33 37.49 4.85
460 511 9.650714 TTGATTTATAACTAGTACTAGGCTGGA 57.349 33.333 29.05 13.59 37.49 3.86
461 512 9.824216 TGATTTATAACTAGTACTAGGCTGGAT 57.176 33.333 29.05 16.92 37.49 3.41
463 514 9.824216 ATTTATAACTAGTACTAGGCTGGATGA 57.176 33.333 29.05 11.61 37.49 2.92
464 515 8.632906 TTATAACTAGTACTAGGCTGGATGAC 57.367 38.462 29.05 0.00 37.49 3.06
465 516 4.799715 ACTAGTACTAGGCTGGATGACT 57.200 45.455 29.05 7.40 37.49 3.41
466 517 5.908562 ACTAGTACTAGGCTGGATGACTA 57.091 43.478 29.05 8.14 37.49 2.59
467 518 6.263412 ACTAGTACTAGGCTGGATGACTAA 57.737 41.667 29.05 0.00 35.52 2.24
468 519 6.670617 ACTAGTACTAGGCTGGATGACTAAA 58.329 40.000 29.05 0.00 35.52 1.85
469 520 7.124052 ACTAGTACTAGGCTGGATGACTAAAA 58.876 38.462 29.05 0.00 35.52 1.52
470 521 6.869206 AGTACTAGGCTGGATGACTAAAAA 57.131 37.500 4.33 0.00 35.52 1.94
471 522 7.439108 AGTACTAGGCTGGATGACTAAAAAT 57.561 36.000 4.33 0.00 35.52 1.82
472 523 7.275920 AGTACTAGGCTGGATGACTAAAAATG 58.724 38.462 4.33 0.00 35.52 2.32
473 524 6.067217 ACTAGGCTGGATGACTAAAAATGT 57.933 37.500 4.33 0.00 35.52 2.71
474 525 6.485171 ACTAGGCTGGATGACTAAAAATGTT 58.515 36.000 4.33 0.00 35.52 2.71
475 526 5.649782 AGGCTGGATGACTAAAAATGTTG 57.350 39.130 0.00 0.00 27.54 3.33
476 527 5.324409 AGGCTGGATGACTAAAAATGTTGA 58.676 37.500 0.00 0.00 27.54 3.18
477 528 5.954150 AGGCTGGATGACTAAAAATGTTGAT 59.046 36.000 0.00 0.00 27.54 2.57
478 529 6.438425 AGGCTGGATGACTAAAAATGTTGATT 59.562 34.615 0.00 0.00 27.54 2.57
479 530 7.038799 AGGCTGGATGACTAAAAATGTTGATTT 60.039 33.333 0.00 0.00 29.11 2.17
480 531 8.250332 GGCTGGATGACTAAAAATGTTGATTTA 58.750 33.333 0.00 0.00 31.18 1.40
481 532 9.807649 GCTGGATGACTAAAAATGTTGATTTAT 57.192 29.630 0.00 0.00 31.18 1.40
687 930 4.700213 TGATTAGTTTTGCCAGCCTACTTC 59.300 41.667 0.00 0.00 0.00 3.01
867 1121 6.810911 TCAGGTAGAGATAAATTGACAGCTC 58.189 40.000 0.00 0.00 0.00 4.09
889 1143 9.959721 AGCTCCTTAAAATGATTCAGTTAGTTA 57.040 29.630 0.00 0.00 0.00 2.24
910 1164 4.771590 ATGTGTTTTTGTGCTCATCGAT 57.228 36.364 0.00 0.00 0.00 3.59
1265 1519 0.608856 ATGTGGGTGATGAAGCGCAA 60.609 50.000 11.47 0.00 0.00 4.85
1481 1735 0.333993 AGACATTCAATGCCCCAGCT 59.666 50.000 0.00 0.00 40.80 4.24
1532 1786 4.885325 TCTCTATATGCAAGTGGTCGTACA 59.115 41.667 0.00 0.00 0.00 2.90
1575 1829 5.602978 TCTCCCTACTCAAGATGGGTTTATC 59.397 44.000 10.28 0.00 40.48 1.75
1579 1833 7.235606 TCCCTACTCAAGATGGGTTTATCTATG 59.764 40.741 10.28 0.00 40.48 2.23
1593 1851 8.548877 GGGTTTATCTATGCTTATATCCCTTCA 58.451 37.037 0.00 0.00 0.00 3.02
1676 2127 0.036010 GTGTGAGCCATACTGTGCCT 60.036 55.000 0.00 0.00 0.00 4.75
2111 2562 1.379843 GACCATGTTCCCCGGCATT 60.380 57.895 0.00 0.00 0.00 3.56
2114 2565 2.037049 ATGTTCCCCGGCATTGCA 59.963 55.556 11.39 0.00 0.00 4.08
2165 2616 1.434622 CGCCGAGCAGCATGAAGATT 61.435 55.000 0.00 0.00 39.69 2.40
2261 2716 0.964358 AGCAGGTACTTACGCGACCT 60.964 55.000 15.93 12.62 44.65 3.85
2270 2726 4.359971 ACTTACGCGACCTTTTTGTTTT 57.640 36.364 15.93 0.00 0.00 2.43
2274 2730 2.095161 ACGCGACCTTTTTGTTTTGTCA 60.095 40.909 15.93 0.00 0.00 3.58
2275 2731 2.529894 CGCGACCTTTTTGTTTTGTCAG 59.470 45.455 0.00 0.00 0.00 3.51
2281 2740 3.932089 CCTTTTTGTTTTGTCAGGGTGTG 59.068 43.478 0.00 0.00 0.00 3.82
2312 2774 9.942526 ATCTTATTCTGGGGAAAAAGATACATT 57.057 29.630 0.00 0.00 34.90 2.71
2313 2775 9.189156 TCTTATTCTGGGGAAAAAGATACATTG 57.811 33.333 0.00 0.00 34.90 2.82
2314 2776 8.893563 TTATTCTGGGGAAAAAGATACATTGT 57.106 30.769 0.00 0.00 34.90 2.71
2362 2826 7.336931 ACATCTTATTACATGAACCAACCAGAC 59.663 37.037 0.00 0.00 0.00 3.51
2402 2866 8.685838 TTCCTACAAAGCAAAGTATTACTTGT 57.314 30.769 9.78 5.95 38.66 3.16
2414 2878 8.564574 CAAAGTATTACTTGTGTTTCCAGCTTA 58.435 33.333 9.78 0.00 38.66 3.09
2433 2897 5.430089 AGCTTATGAAGAAAGTACCCCTGAT 59.570 40.000 0.00 0.00 0.00 2.90
2434 2898 5.529060 GCTTATGAAGAAAGTACCCCTGATG 59.471 44.000 0.00 0.00 0.00 3.07
2435 2899 6.636454 TTATGAAGAAAGTACCCCTGATGT 57.364 37.500 0.00 0.00 0.00 3.06
2437 2901 6.636454 ATGAAGAAAGTACCCCTGATGTTA 57.364 37.500 0.00 0.00 0.00 2.41
2439 2903 6.650120 TGAAGAAAGTACCCCTGATGTTATC 58.350 40.000 0.00 0.00 0.00 1.75
2440 2904 6.214615 TGAAGAAAGTACCCCTGATGTTATCA 59.785 38.462 0.00 0.00 37.76 2.15
2441 2905 6.636454 AGAAAGTACCCCTGATGTTATCAA 57.364 37.500 0.00 0.00 39.11 2.57
2442 2906 7.027874 AGAAAGTACCCCTGATGTTATCAAA 57.972 36.000 0.00 0.00 39.11 2.69
2443 2907 7.466804 AGAAAGTACCCCTGATGTTATCAAAA 58.533 34.615 0.00 0.00 39.11 2.44
2444 2908 7.947890 AGAAAGTACCCCTGATGTTATCAAAAA 59.052 33.333 0.00 0.00 39.11 1.94
2467 2931 4.706616 AGAAAGTACCCCTGATCCCTTTA 58.293 43.478 0.00 0.00 0.00 1.85
2468 2932 5.105853 AGAAAGTACCCCTGATCCCTTTAA 58.894 41.667 0.00 0.00 0.00 1.52
2504 2968 4.202684 TGGATATCCAAGGGAGAGTACGAT 60.203 45.833 22.52 0.00 44.35 3.73
2561 3025 2.349755 GCCTTGGGCCGTGTCTTA 59.650 61.111 0.00 0.00 44.06 2.10
2563 3027 1.677552 CCTTGGGCCGTGTCTTACT 59.322 57.895 0.00 0.00 0.00 2.24
2564 3028 0.391263 CCTTGGGCCGTGTCTTACTC 60.391 60.000 0.00 0.00 0.00 2.59
2565 3029 0.391263 CTTGGGCCGTGTCTTACTCC 60.391 60.000 0.00 0.00 0.00 3.85
2638 3112 1.183549 TGAAGTACTCCCCGAGCTTC 58.816 55.000 0.00 0.00 32.95 3.86
2639 3113 1.272536 TGAAGTACTCCCCGAGCTTCT 60.273 52.381 0.00 0.00 33.26 2.85
2640 3114 1.826096 GAAGTACTCCCCGAGCTTCTT 59.174 52.381 0.00 0.00 31.12 2.52
2641 3115 1.187087 AGTACTCCCCGAGCTTCTTG 58.813 55.000 0.00 0.00 32.04 3.02
2666 3140 3.959520 CGTTTTCGCGGATGCTTTA 57.040 47.368 6.13 0.00 39.65 1.85
2747 3222 2.286294 GCCGCTTGTTCTCAGTGATATG 59.714 50.000 0.00 0.00 0.00 1.78
2854 3332 3.699894 AGAGTGCAGGACGCTGGG 61.700 66.667 0.00 0.00 39.93 4.45
2899 3382 8.202461 TCTTCCATTAAGTATATTGGATCGGT 57.798 34.615 0.00 0.00 39.86 4.69
2902 3385 7.158697 TCCATTAAGTATATTGGATCGGTGTG 58.841 38.462 0.00 0.00 36.89 3.82
2905 3388 5.623956 AAGTATATTGGATCGGTGTGGAA 57.376 39.130 0.00 0.00 0.00 3.53
3043 3548 0.107703 TAGTGCCTCCTTCCATTGCG 60.108 55.000 0.00 0.00 0.00 4.85
3051 3556 3.104602 CTTCCATTGCGAGCGCTGG 62.105 63.158 18.48 16.97 42.51 4.85
3066 3571 1.473257 CGCTGGTGGCAGTATGTATGT 60.473 52.381 0.00 0.00 41.91 2.29
3067 3572 2.223947 CGCTGGTGGCAGTATGTATGTA 60.224 50.000 0.00 0.00 41.91 2.29
3068 3573 3.554960 CGCTGGTGGCAGTATGTATGTAT 60.555 47.826 0.00 0.00 41.91 2.29
3069 3574 3.748048 GCTGGTGGCAGTATGTATGTATG 59.252 47.826 0.00 0.00 41.35 2.39
3070 3575 4.743651 GCTGGTGGCAGTATGTATGTATGT 60.744 45.833 0.00 0.00 41.35 2.29
3071 3576 5.510690 GCTGGTGGCAGTATGTATGTATGTA 60.511 44.000 0.00 0.00 41.35 2.29
3072 3577 6.680148 TGGTGGCAGTATGTATGTATGTAT 57.320 37.500 0.00 0.00 39.31 2.29
3073 3578 6.463360 TGGTGGCAGTATGTATGTATGTATG 58.537 40.000 0.00 0.00 39.31 2.39
3086 3591 9.482627 TGTATGTATGTATGATGTTTATGCGAA 57.517 29.630 0.00 0.00 0.00 4.70
3089 3594 9.830294 ATGTATGTATGATGTTTATGCGAAATG 57.170 29.630 0.00 0.00 0.00 2.32
3101 3606 0.310543 GCGAAATGTGTGCCACTGAA 59.689 50.000 0.00 0.00 35.11 3.02
3124 3629 2.122783 CCGGAGGCTTTTGTGGAATA 57.877 50.000 0.00 0.00 46.14 1.75
3125 3630 2.654863 CCGGAGGCTTTTGTGGAATAT 58.345 47.619 0.00 0.00 46.14 1.28
3126 3631 3.023832 CCGGAGGCTTTTGTGGAATATT 58.976 45.455 0.00 0.00 46.14 1.28
3127 3632 4.204012 CCGGAGGCTTTTGTGGAATATTA 58.796 43.478 0.00 0.00 46.14 0.98
3128 3633 4.827284 CCGGAGGCTTTTGTGGAATATTAT 59.173 41.667 0.00 0.00 46.14 1.28
3129 3634 6.001460 CCGGAGGCTTTTGTGGAATATTATA 58.999 40.000 0.00 0.00 46.14 0.98
3156 3661 3.861276 TCCATCTGCTTTGATGCTTTG 57.139 42.857 8.65 0.00 41.65 2.77
3157 3662 2.094390 TCCATCTGCTTTGATGCTTTGC 60.094 45.455 8.65 0.00 41.65 3.68
3158 3663 1.917955 CATCTGCTTTGATGCTTTGCG 59.082 47.619 0.00 0.00 37.59 4.85
3159 3664 0.387622 TCTGCTTTGATGCTTTGCGC 60.388 50.000 0.00 0.00 39.77 6.09
3160 3665 1.349259 CTGCTTTGATGCTTTGCGCC 61.349 55.000 4.18 0.00 38.05 6.53
3161 3666 1.080298 GCTTTGATGCTTTGCGCCT 60.080 52.632 4.18 0.00 38.05 5.52
3162 3667 1.349259 GCTTTGATGCTTTGCGCCTG 61.349 55.000 4.18 0.00 38.05 4.85
3166 3671 1.286880 GATGCTTTGCGCCTGTGTT 59.713 52.632 4.18 0.00 38.05 3.32
3176 3681 1.733526 GCCTGTGTTTTTGTCGCCT 59.266 52.632 0.00 0.00 0.00 5.52
3186 3691 4.202202 TGTTTTTGTCGCCTCCAATGATTT 60.202 37.500 0.00 0.00 0.00 2.17
3187 3692 3.848272 TTTGTCGCCTCCAATGATTTC 57.152 42.857 0.00 0.00 0.00 2.17
3191 3696 3.826157 TGTCGCCTCCAATGATTTCTTTT 59.174 39.130 0.00 0.00 0.00 2.27
3192 3697 4.280677 TGTCGCCTCCAATGATTTCTTTTT 59.719 37.500 0.00 0.00 0.00 1.94
3193 3698 4.622740 GTCGCCTCCAATGATTTCTTTTTG 59.377 41.667 0.00 0.00 0.00 2.44
3194 3699 4.522405 TCGCCTCCAATGATTTCTTTTTGA 59.478 37.500 0.00 0.00 0.00 2.69
3195 3700 4.860907 CGCCTCCAATGATTTCTTTTTGAG 59.139 41.667 0.00 0.00 0.00 3.02
3197 3702 6.458210 GCCTCCAATGATTTCTTTTTGAGAA 58.542 36.000 0.00 0.00 42.56 2.87
3199 3704 6.870439 CCTCCAATGATTTCTTTTTGAGAACC 59.130 38.462 0.00 0.00 43.90 3.62
3200 3705 7.256083 CCTCCAATGATTTCTTTTTGAGAACCT 60.256 37.037 0.00 0.00 43.90 3.50
3201 3706 7.661040 TCCAATGATTTCTTTTTGAGAACCTC 58.339 34.615 0.00 0.00 43.90 3.85
3202 3707 7.287466 TCCAATGATTTCTTTTTGAGAACCTCA 59.713 33.333 0.00 0.00 43.90 3.86
3203 3708 8.092687 CCAATGATTTCTTTTTGAGAACCTCAT 58.907 33.333 0.00 6.98 43.90 2.90
3205 3710 6.449698 TGATTTCTTTTTGAGAACCTCATGC 58.550 36.000 0.00 0.00 43.90 4.06
3207 3712 3.738982 TCTTTTTGAGAACCTCATGCGA 58.261 40.909 0.00 0.00 40.39 5.10
3216 3721 2.503061 CTCATGCGAGGACAGGGG 59.497 66.667 0.00 0.00 35.44 4.79
3217 3722 2.284625 TCATGCGAGGACAGGGGT 60.285 61.111 0.00 0.00 0.00 4.95
3218 3723 1.903877 CTCATGCGAGGACAGGGGTT 61.904 60.000 0.00 0.00 35.44 4.11
3219 3724 1.002134 CATGCGAGGACAGGGGTTT 60.002 57.895 0.00 0.00 0.00 3.27
3220 3725 1.026718 CATGCGAGGACAGGGGTTTC 61.027 60.000 0.00 0.00 0.00 2.78
3221 3726 2.046217 GCGAGGACAGGGGTTTCC 60.046 66.667 0.00 0.00 0.00 3.13
3230 3735 1.073199 AGGGGTTTCCTGCAGTTCG 59.927 57.895 13.81 0.00 46.07 3.95
3231 3736 1.228154 GGGGTTTCCTGCAGTTCGT 60.228 57.895 13.81 0.00 0.00 3.85
3232 3737 0.822121 GGGGTTTCCTGCAGTTCGTT 60.822 55.000 13.81 0.00 0.00 3.85
3233 3738 1.543871 GGGGTTTCCTGCAGTTCGTTA 60.544 52.381 13.81 0.00 0.00 3.18
3234 3739 2.223745 GGGTTTCCTGCAGTTCGTTAA 58.776 47.619 13.81 0.00 0.00 2.01
3235 3740 2.225727 GGGTTTCCTGCAGTTCGTTAAG 59.774 50.000 13.81 0.00 0.00 1.85
3236 3741 3.135994 GGTTTCCTGCAGTTCGTTAAGA 58.864 45.455 13.81 0.00 0.00 2.10
3237 3742 3.562557 GGTTTCCTGCAGTTCGTTAAGAA 59.437 43.478 13.81 3.31 36.31 2.52
3238 3743 4.319549 GGTTTCCTGCAGTTCGTTAAGAAG 60.320 45.833 13.81 0.00 39.95 2.85
3239 3744 4.330944 TTCCTGCAGTTCGTTAAGAAGA 57.669 40.909 13.81 0.00 39.95 2.87
3240 3745 4.330944 TCCTGCAGTTCGTTAAGAAGAA 57.669 40.909 13.81 0.00 39.95 2.52
3241 3746 4.699637 TCCTGCAGTTCGTTAAGAAGAAA 58.300 39.130 13.81 0.00 39.95 2.52
3242 3747 4.750098 TCCTGCAGTTCGTTAAGAAGAAAG 59.250 41.667 13.81 0.00 39.95 2.62
3243 3748 4.750098 CCTGCAGTTCGTTAAGAAGAAAGA 59.250 41.667 13.81 0.00 39.95 2.52
3244 3749 5.409826 CCTGCAGTTCGTTAAGAAGAAAGAT 59.590 40.000 13.81 0.00 39.95 2.40
3245 3750 6.228273 TGCAGTTCGTTAAGAAGAAAGATG 57.772 37.500 0.00 0.00 39.95 2.90
3246 3751 5.989168 TGCAGTTCGTTAAGAAGAAAGATGA 59.011 36.000 0.00 0.00 39.95 2.92
3247 3752 6.650807 TGCAGTTCGTTAAGAAGAAAGATGAT 59.349 34.615 0.00 0.00 39.95 2.45
3248 3753 7.148573 TGCAGTTCGTTAAGAAGAAAGATGATC 60.149 37.037 0.00 0.00 39.95 2.92
3249 3754 7.675170 GCAGTTCGTTAAGAAGAAAGATGATCC 60.675 40.741 0.00 0.00 39.95 3.36
3250 3755 6.531948 AGTTCGTTAAGAAGAAAGATGATCCG 59.468 38.462 0.00 0.00 39.95 4.18
3251 3756 6.203808 TCGTTAAGAAGAAAGATGATCCGA 57.796 37.500 0.00 0.00 0.00 4.55
3252 3757 6.806751 TCGTTAAGAAGAAAGATGATCCGAT 58.193 36.000 0.00 0.00 0.00 4.18
3253 3758 6.697455 TCGTTAAGAAGAAAGATGATCCGATG 59.303 38.462 0.00 0.00 0.00 3.84
3254 3759 6.477033 CGTTAAGAAGAAAGATGATCCGATGT 59.523 38.462 0.00 0.00 0.00 3.06
3255 3760 7.648112 CGTTAAGAAGAAAGATGATCCGATGTA 59.352 37.037 0.00 0.00 0.00 2.29
3256 3761 9.482627 GTTAAGAAGAAAGATGATCCGATGTAT 57.517 33.333 0.00 0.00 0.00 2.29
3259 3764 8.415950 AGAAGAAAGATGATCCGATGTATACT 57.584 34.615 4.17 0.00 0.00 2.12
3260 3765 8.519526 AGAAGAAAGATGATCCGATGTATACTC 58.480 37.037 4.17 0.00 0.00 2.59
3261 3766 7.767250 AGAAAGATGATCCGATGTATACTCA 57.233 36.000 4.17 0.00 0.00 3.41
3262 3767 7.825681 AGAAAGATGATCCGATGTATACTCAG 58.174 38.462 4.17 0.00 0.00 3.35
3263 3768 5.574891 AGATGATCCGATGTATACTCAGC 57.425 43.478 4.17 1.31 0.00 4.26
3264 3769 5.260424 AGATGATCCGATGTATACTCAGCT 58.740 41.667 4.17 3.66 0.00 4.24
3265 3770 4.773323 TGATCCGATGTATACTCAGCTG 57.227 45.455 7.63 7.63 0.00 4.24
3266 3771 3.507622 TGATCCGATGTATACTCAGCTGG 59.492 47.826 15.13 7.28 0.00 4.85
3267 3772 3.223674 TCCGATGTATACTCAGCTGGA 57.776 47.619 15.13 0.00 0.00 3.86
3268 3773 3.767711 TCCGATGTATACTCAGCTGGAT 58.232 45.455 15.13 7.83 0.00 3.41
3269 3774 4.918588 TCCGATGTATACTCAGCTGGATA 58.081 43.478 15.13 7.10 0.00 2.59
3270 3775 5.321927 TCCGATGTATACTCAGCTGGATAA 58.678 41.667 15.13 0.00 0.00 1.75
3271 3776 5.773176 TCCGATGTATACTCAGCTGGATAAA 59.227 40.000 15.13 5.30 0.00 1.40
3272 3777 5.864474 CCGATGTATACTCAGCTGGATAAAC 59.136 44.000 15.13 8.06 0.00 2.01
3273 3778 5.569441 CGATGTATACTCAGCTGGATAAACG 59.431 44.000 15.13 11.02 0.00 3.60
3274 3779 5.196341 TGTATACTCAGCTGGATAAACGG 57.804 43.478 15.13 0.00 0.00 4.44
3275 3780 3.753294 ATACTCAGCTGGATAAACGGG 57.247 47.619 15.13 0.00 0.00 5.28
3276 3781 0.107654 ACTCAGCTGGATAAACGGGC 60.108 55.000 15.13 0.00 0.00 6.13
3277 3782 1.153449 TCAGCTGGATAAACGGGCG 60.153 57.895 15.13 0.00 0.00 6.13
3278 3783 2.180204 CAGCTGGATAAACGGGCGG 61.180 63.158 5.57 0.00 0.00 6.13
3279 3784 2.124860 GCTGGATAAACGGGCGGT 60.125 61.111 0.00 0.00 0.00 5.68
3280 3785 1.747745 GCTGGATAAACGGGCGGTT 60.748 57.895 4.42 4.42 41.76 4.44
3282 3787 1.170442 CTGGATAAACGGGCGGTTTT 58.830 50.000 25.08 14.42 46.52 2.43
3283 3788 1.542472 CTGGATAAACGGGCGGTTTTT 59.458 47.619 25.08 18.47 46.52 1.94
3284 3789 1.540707 TGGATAAACGGGCGGTTTTTC 59.459 47.619 25.08 24.05 46.52 2.29
3285 3790 2.267188 GATAAACGGGCGGTTTTTCC 57.733 50.000 25.08 12.68 46.52 3.13
3286 3791 1.814394 GATAAACGGGCGGTTTTTCCT 59.186 47.619 25.08 10.39 46.52 3.36
3287 3792 1.237533 TAAACGGGCGGTTTTTCCTC 58.762 50.000 25.08 0.00 46.52 3.71
3288 3793 1.788067 AAACGGGCGGTTTTTCCTCG 61.788 55.000 16.35 0.00 46.52 4.63
3289 3794 2.357760 CGGGCGGTTTTTCCTCGA 60.358 61.111 0.00 0.00 0.00 4.04
3290 3795 1.743995 CGGGCGGTTTTTCCTCGAT 60.744 57.895 0.00 0.00 0.00 3.59
3291 3796 1.800681 GGGCGGTTTTTCCTCGATG 59.199 57.895 0.00 0.00 0.00 3.84
3292 3797 1.654023 GGGCGGTTTTTCCTCGATGG 61.654 60.000 0.00 0.00 37.10 3.51
3293 3798 1.136774 GCGGTTTTTCCTCGATGGC 59.863 57.895 0.00 0.00 35.26 4.40
3294 3799 1.582610 GCGGTTTTTCCTCGATGGCA 61.583 55.000 0.00 0.00 35.26 4.92
3295 3800 0.447801 CGGTTTTTCCTCGATGGCAG 59.552 55.000 0.00 0.00 35.26 4.85
3296 3801 0.171231 GGTTTTTCCTCGATGGCAGC 59.829 55.000 0.00 0.00 35.26 5.25
3297 3802 1.168714 GTTTTTCCTCGATGGCAGCT 58.831 50.000 0.00 0.00 35.26 4.24
3298 3803 1.135575 GTTTTTCCTCGATGGCAGCTG 60.136 52.381 10.11 10.11 35.26 4.24
3299 3804 1.308069 TTTTCCTCGATGGCAGCTGC 61.308 55.000 30.88 30.88 41.14 5.25
3300 3805 2.189191 TTTCCTCGATGGCAGCTGCT 62.189 55.000 35.82 19.70 41.70 4.24
3301 3806 2.584261 TTCCTCGATGGCAGCTGCTC 62.584 60.000 35.82 25.48 41.70 4.26
3302 3807 2.588314 CTCGATGGCAGCTGCTCC 60.588 66.667 35.82 21.98 41.70 4.70
3303 3808 3.381333 CTCGATGGCAGCTGCTCCA 62.381 63.158 35.82 26.73 41.70 3.86
3304 3809 2.203167 CGATGGCAGCTGCTCCAT 60.203 61.111 35.82 29.86 45.17 3.41
3305 3810 1.070275 CGATGGCAGCTGCTCCATA 59.930 57.895 35.82 18.36 42.74 2.74
3306 3811 0.321387 CGATGGCAGCTGCTCCATAT 60.321 55.000 35.82 21.76 42.74 1.78
3307 3812 1.881072 CGATGGCAGCTGCTCCATATT 60.881 52.381 35.82 13.33 42.74 1.28
3308 3813 2.613725 CGATGGCAGCTGCTCCATATTA 60.614 50.000 35.82 13.76 42.74 0.98
3309 3814 3.618351 GATGGCAGCTGCTCCATATTAT 58.382 45.455 35.82 17.34 42.74 1.28
3310 3815 2.786777 TGGCAGCTGCTCCATATTATG 58.213 47.619 35.82 0.00 41.70 1.90
3311 3816 2.107031 TGGCAGCTGCTCCATATTATGT 59.893 45.455 35.82 0.00 41.70 2.29
3312 3817 3.152341 GGCAGCTGCTCCATATTATGTT 58.848 45.455 35.82 0.00 41.70 2.71
3313 3818 3.057736 GGCAGCTGCTCCATATTATGTTG 60.058 47.826 35.82 0.00 41.70 3.33
3314 3819 3.817084 GCAGCTGCTCCATATTATGTTGA 59.183 43.478 31.33 0.00 38.21 3.18
3315 3820 4.458295 GCAGCTGCTCCATATTATGTTGAT 59.542 41.667 31.33 0.00 38.21 2.57
3316 3821 5.645067 GCAGCTGCTCCATATTATGTTGATA 59.355 40.000 31.33 0.00 38.21 2.15
3317 3822 6.318144 GCAGCTGCTCCATATTATGTTGATAT 59.682 38.462 31.33 0.00 38.21 1.63
3318 3823 7.148120 GCAGCTGCTCCATATTATGTTGATATT 60.148 37.037 31.33 0.00 38.21 1.28
3319 3824 8.737175 CAGCTGCTCCATATTATGTTGATATTT 58.263 33.333 0.00 0.00 0.00 1.40
3320 3825 8.737175 AGCTGCTCCATATTATGTTGATATTTG 58.263 33.333 0.00 0.00 0.00 2.32
3321 3826 8.517878 GCTGCTCCATATTATGTTGATATTTGT 58.482 33.333 3.10 0.00 0.00 2.83
3322 3827 9.836076 CTGCTCCATATTATGTTGATATTTGTG 57.164 33.333 3.10 0.00 0.00 3.33
3323 3828 9.353431 TGCTCCATATTATGTTGATATTTGTGT 57.647 29.630 3.10 0.00 0.00 3.72
3324 3829 9.831737 GCTCCATATTATGTTGATATTTGTGTC 57.168 33.333 3.10 0.00 0.00 3.67
3326 3831 9.859152 TCCATATTATGTTGATATTTGTGTCCA 57.141 29.630 3.10 0.00 0.00 4.02
3329 3834 4.989279 ATGTTGATATTTGTGTCCAGGC 57.011 40.909 0.00 0.00 0.00 4.85
3330 3835 3.760738 TGTTGATATTTGTGTCCAGGCA 58.239 40.909 0.00 0.00 0.00 4.75
3331 3836 4.148079 TGTTGATATTTGTGTCCAGGCAA 58.852 39.130 0.00 0.00 0.00 4.52
3332 3837 4.022416 TGTTGATATTTGTGTCCAGGCAAC 60.022 41.667 0.00 0.00 35.10 4.17
3345 3850 2.544726 GGCAACTTGGTTCTCTCGG 58.455 57.895 0.00 0.00 0.00 4.63
3346 3851 0.034896 GGCAACTTGGTTCTCTCGGA 59.965 55.000 0.00 0.00 0.00 4.55
3347 3852 1.433534 GCAACTTGGTTCTCTCGGAG 58.566 55.000 0.00 0.00 0.00 4.63
3348 3853 1.270358 GCAACTTGGTTCTCTCGGAGT 60.270 52.381 4.69 0.00 0.00 3.85
3349 3854 2.807108 GCAACTTGGTTCTCTCGGAGTT 60.807 50.000 4.69 0.00 0.00 3.01
3350 3855 3.554337 GCAACTTGGTTCTCTCGGAGTTA 60.554 47.826 4.69 0.00 0.00 2.24
3351 3856 4.822026 CAACTTGGTTCTCTCGGAGTTAT 58.178 43.478 4.69 0.00 0.00 1.89
3352 3857 5.238583 CAACTTGGTTCTCTCGGAGTTATT 58.761 41.667 4.69 0.00 0.00 1.40
3353 3858 4.822026 ACTTGGTTCTCTCGGAGTTATTG 58.178 43.478 4.69 0.00 0.00 1.90
3354 3859 4.283722 ACTTGGTTCTCTCGGAGTTATTGT 59.716 41.667 4.69 0.00 0.00 2.71
3355 3860 5.479375 ACTTGGTTCTCTCGGAGTTATTGTA 59.521 40.000 4.69 0.00 0.00 2.41
3356 3861 5.320549 TGGTTCTCTCGGAGTTATTGTAC 57.679 43.478 4.69 0.00 0.00 2.90
3357 3862 5.014858 TGGTTCTCTCGGAGTTATTGTACT 58.985 41.667 4.69 0.00 0.00 2.73
3358 3863 5.125097 TGGTTCTCTCGGAGTTATTGTACTC 59.875 44.000 4.69 0.00 43.05 2.59
3387 3892 9.014297 ACTTAATAGGAATGCCAATATTGTAGC 57.986 33.333 14.25 11.46 36.29 3.58
3388 3893 9.236006 CTTAATAGGAATGCCAATATTGTAGCT 57.764 33.333 14.25 0.00 36.29 3.32
3389 3894 7.693969 AATAGGAATGCCAATATTGTAGCTC 57.306 36.000 14.25 6.16 36.29 4.09
3390 3895 5.052693 AGGAATGCCAATATTGTAGCTCA 57.947 39.130 14.25 4.78 36.29 4.26
3391 3896 5.638133 AGGAATGCCAATATTGTAGCTCAT 58.362 37.500 14.25 6.63 36.29 2.90
3392 3897 5.475909 AGGAATGCCAATATTGTAGCTCATG 59.524 40.000 14.25 0.00 36.29 3.07
3393 3898 4.778534 ATGCCAATATTGTAGCTCATGC 57.221 40.909 14.25 8.14 40.05 4.06
3394 3899 2.886523 TGCCAATATTGTAGCTCATGCC 59.113 45.455 14.25 0.00 40.80 4.40
3395 3900 3.152341 GCCAATATTGTAGCTCATGCCT 58.848 45.455 14.25 0.00 40.80 4.75
3396 3901 3.571401 GCCAATATTGTAGCTCATGCCTT 59.429 43.478 14.25 0.00 40.80 4.35
3397 3902 4.761739 GCCAATATTGTAGCTCATGCCTTA 59.238 41.667 14.25 0.00 40.80 2.69
3398 3903 5.416952 GCCAATATTGTAGCTCATGCCTTAT 59.583 40.000 14.25 0.00 40.80 1.73
3399 3904 6.071728 GCCAATATTGTAGCTCATGCCTTATT 60.072 38.462 14.25 0.00 40.80 1.40
3400 3905 7.121168 GCCAATATTGTAGCTCATGCCTTATTA 59.879 37.037 14.25 0.00 40.80 0.98
3401 3906 9.182214 CCAATATTGTAGCTCATGCCTTATTAT 57.818 33.333 14.25 0.00 40.80 1.28
3406 3911 9.745018 ATTGTAGCTCATGCCTTATTATTATGT 57.255 29.630 0.00 0.00 40.80 2.29
3407 3912 9.573166 TTGTAGCTCATGCCTTATTATTATGTT 57.427 29.630 0.00 0.00 40.80 2.71
3408 3913 9.002600 TGTAGCTCATGCCTTATTATTATGTTG 57.997 33.333 0.00 0.00 40.80 3.33
3409 3914 9.219603 GTAGCTCATGCCTTATTATTATGTTGA 57.780 33.333 0.00 0.00 40.80 3.18
3410 3915 8.874744 AGCTCATGCCTTATTATTATGTTGAT 57.125 30.769 0.00 0.00 40.80 2.57
3411 3916 9.964354 AGCTCATGCCTTATTATTATGTTGATA 57.036 29.630 0.00 0.00 40.80 2.15
3425 3930 8.978874 ATTATGTTGATATTTGTGTCCTAGCA 57.021 30.769 0.00 0.00 0.00 3.49
3426 3931 8.800370 TTATGTTGATATTTGTGTCCTAGCAA 57.200 30.769 0.00 0.00 0.00 3.91
3427 3932 6.494893 TGTTGATATTTGTGTCCTAGCAAC 57.505 37.500 0.00 0.00 40.41 4.17
3428 3933 6.237901 TGTTGATATTTGTGTCCTAGCAACT 58.762 36.000 10.18 0.00 40.55 3.16
3429 3934 6.714810 TGTTGATATTTGTGTCCTAGCAACTT 59.285 34.615 10.18 0.00 40.55 2.66
3430 3935 6.741992 TGATATTTGTGTCCTAGCAACTTG 57.258 37.500 0.00 0.00 0.00 3.16
3431 3936 5.647658 TGATATTTGTGTCCTAGCAACTTGG 59.352 40.000 0.00 0.00 0.00 3.61
3432 3937 3.290948 TTTGTGTCCTAGCAACTTGGT 57.709 42.857 0.00 0.00 0.00 3.67
3433 3938 3.290948 TTGTGTCCTAGCAACTTGGTT 57.709 42.857 0.00 0.00 0.00 3.67
3434 3939 2.846193 TGTGTCCTAGCAACTTGGTTC 58.154 47.619 0.00 0.00 0.00 3.62
3435 3940 2.438021 TGTGTCCTAGCAACTTGGTTCT 59.562 45.455 0.00 0.00 0.00 3.01
3436 3941 3.067833 GTGTCCTAGCAACTTGGTTCTC 58.932 50.000 0.00 0.00 0.00 2.87
3437 3942 2.972713 TGTCCTAGCAACTTGGTTCTCT 59.027 45.455 0.00 0.00 0.00 3.10
3438 3943 3.006967 TGTCCTAGCAACTTGGTTCTCTC 59.993 47.826 0.00 0.00 0.00 3.20
3439 3944 2.231478 TCCTAGCAACTTGGTTCTCTCG 59.769 50.000 0.00 0.00 0.00 4.04
3440 3945 2.611518 CTAGCAACTTGGTTCTCTCGG 58.388 52.381 0.00 0.00 0.00 4.63
3441 3946 1.048601 AGCAACTTGGTTCTCTCGGA 58.951 50.000 0.00 0.00 0.00 4.55
3442 3947 1.001406 AGCAACTTGGTTCTCTCGGAG 59.999 52.381 0.00 0.00 0.00 4.63
3443 3948 1.270358 GCAACTTGGTTCTCTCGGAGT 60.270 52.381 4.69 0.00 0.00 3.85
3444 3949 2.807108 GCAACTTGGTTCTCTCGGAGTT 60.807 50.000 4.69 0.00 0.00 3.01
3445 3950 2.802816 CAACTTGGTTCTCTCGGAGTTG 59.197 50.000 4.69 0.00 38.34 3.16
3446 3951 1.270358 ACTTGGTTCTCTCGGAGTTGC 60.270 52.381 4.69 0.00 0.00 4.17
3447 3952 1.001406 CTTGGTTCTCTCGGAGTTGCT 59.999 52.381 4.69 0.00 0.00 3.91
3448 3953 0.318441 TGGTTCTCTCGGAGTTGCTG 59.682 55.000 4.69 0.00 0.00 4.41
3449 3954 0.318762 GGTTCTCTCGGAGTTGCTGT 59.681 55.000 4.69 0.00 0.00 4.40
3450 3955 1.544691 GGTTCTCTCGGAGTTGCTGTA 59.455 52.381 4.69 0.00 0.00 2.74
3451 3956 2.029290 GGTTCTCTCGGAGTTGCTGTAA 60.029 50.000 4.69 0.00 0.00 2.41
3452 3957 3.368531 GGTTCTCTCGGAGTTGCTGTAAT 60.369 47.826 4.69 0.00 0.00 1.89
3453 3958 4.246458 GTTCTCTCGGAGTTGCTGTAATT 58.754 43.478 4.69 0.00 0.00 1.40
3455 3960 3.258372 TCTCTCGGAGTTGCTGTAATTGT 59.742 43.478 4.69 0.00 0.00 2.71
3460 3965 3.259064 GGAGTTGCTGTAATTGTAGCGA 58.741 45.455 10.08 6.48 42.74 4.93
3466 3971 3.069586 TGCTGTAATTGTAGCGAGGCTAT 59.930 43.478 0.12 0.00 43.30 2.97
3467 3972 3.430218 GCTGTAATTGTAGCGAGGCTATG 59.570 47.826 0.12 0.00 43.30 2.23
3478 3983 3.876198 GGCTATGCCGCAACCACG 61.876 66.667 0.00 0.00 39.62 4.94
3479 3984 3.124921 GCTATGCCGCAACCACGT 61.125 61.111 0.00 0.00 0.00 4.49
3480 3985 2.784596 CTATGCCGCAACCACGTG 59.215 61.111 9.08 9.08 0.00 4.49
3481 3986 2.031314 TATGCCGCAACCACGTGT 59.969 55.556 15.65 0.00 0.00 4.49
3482 3987 1.573829 CTATGCCGCAACCACGTGTT 61.574 55.000 15.65 6.19 37.80 3.32
3483 3988 1.167155 TATGCCGCAACCACGTGTTT 61.167 50.000 15.65 2.97 34.00 2.83
3485 3990 3.102985 CCGCAACCACGTGTTTGA 58.897 55.556 27.47 0.00 34.00 2.69
3486 3991 1.652012 CCGCAACCACGTGTTTGAT 59.348 52.632 27.47 0.00 34.00 2.57
3487 3992 0.030101 CCGCAACCACGTGTTTGATT 59.970 50.000 27.47 5.35 34.00 2.57
3488 3993 1.535015 CCGCAACCACGTGTTTGATTT 60.535 47.619 27.47 2.40 34.00 2.17
3490 3995 1.857837 GCAACCACGTGTTTGATTTGG 59.142 47.619 27.47 5.69 34.00 3.28
3492 3997 1.770294 ACCACGTGTTTGATTTGGGT 58.230 45.000 15.65 0.00 0.00 4.51
3493 3998 2.104170 ACCACGTGTTTGATTTGGGTT 58.896 42.857 15.65 0.00 0.00 4.11
3494 3999 2.159170 ACCACGTGTTTGATTTGGGTTG 60.159 45.455 15.65 0.00 0.00 3.77
3495 4000 2.099921 CCACGTGTTTGATTTGGGTTGA 59.900 45.455 15.65 0.00 0.00 3.18
3496 4001 3.243704 CCACGTGTTTGATTTGGGTTGAT 60.244 43.478 15.65 0.00 0.00 2.57
3498 4003 3.634448 ACGTGTTTGATTTGGGTTGATGA 59.366 39.130 0.00 0.00 0.00 2.92
3499 4004 4.229096 CGTGTTTGATTTGGGTTGATGAG 58.771 43.478 0.00 0.00 0.00 2.90
3501 4006 3.006752 TGTTTGATTTGGGTTGATGAGCC 59.993 43.478 0.00 0.00 46.43 4.70
3502 4007 2.905415 TGATTTGGGTTGATGAGCCT 57.095 45.000 0.00 0.00 46.39 4.58
3503 4008 2.726821 TGATTTGGGTTGATGAGCCTC 58.273 47.619 0.00 0.00 46.39 4.70
3504 4009 2.309755 TGATTTGGGTTGATGAGCCTCT 59.690 45.455 0.00 0.00 46.39 3.69
3505 4010 2.978156 TTTGGGTTGATGAGCCTCTT 57.022 45.000 0.00 0.00 46.39 2.85
3506 4011 2.205022 TTGGGTTGATGAGCCTCTTG 57.795 50.000 0.00 0.00 46.39 3.02
3507 4012 1.361204 TGGGTTGATGAGCCTCTTGA 58.639 50.000 0.00 0.00 46.39 3.02
3509 4014 1.280421 GGGTTGATGAGCCTCTTGAGT 59.720 52.381 0.00 0.00 42.81 3.41
3510 4015 2.290577 GGGTTGATGAGCCTCTTGAGTT 60.291 50.000 0.00 0.00 42.81 3.01
3511 4016 3.416156 GGTTGATGAGCCTCTTGAGTTT 58.584 45.455 0.00 0.00 0.00 2.66
3512 4017 3.823304 GGTTGATGAGCCTCTTGAGTTTT 59.177 43.478 0.00 0.00 0.00 2.43
3514 4019 5.649831 GGTTGATGAGCCTCTTGAGTTTTAT 59.350 40.000 0.00 0.00 0.00 1.40
3515 4020 6.151817 GGTTGATGAGCCTCTTGAGTTTTATT 59.848 38.462 0.00 0.00 0.00 1.40
3517 4022 8.897752 GTTGATGAGCCTCTTGAGTTTTATTAT 58.102 33.333 0.00 0.00 0.00 1.28
3520 4025 9.336171 GATGAGCCTCTTGAGTTTTATTATCTT 57.664 33.333 0.00 0.00 0.00 2.40
3522 4027 9.823647 TGAGCCTCTTGAGTTTTATTATCTTAG 57.176 33.333 0.00 0.00 0.00 2.18
3523 4028 9.825109 GAGCCTCTTGAGTTTTATTATCTTAGT 57.175 33.333 0.00 0.00 0.00 2.24
3524 4029 9.825109 AGCCTCTTGAGTTTTATTATCTTAGTC 57.175 33.333 0.00 0.00 0.00 2.59
3525 4030 9.825109 GCCTCTTGAGTTTTATTATCTTAGTCT 57.175 33.333 0.00 0.00 0.00 3.24
3541 4046 8.871629 ATCTTAGTCTGATGTATCCGTTATCT 57.128 34.615 0.00 0.00 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.625786 TGATGTGCACATATAGCATTTAGATT 57.374 30.769 31.45 5.15 44.79 2.40
14 17 4.820173 CCACTAGAATGATGATGTGCACAT 59.180 41.667 31.82 31.82 39.70 3.21
34 37 7.930217 TCATACATAGCAATCTTAAAAGCCAC 58.070 34.615 0.00 0.00 0.00 5.01
37 40 9.956720 AACATCATACATAGCAATCTTAAAAGC 57.043 29.630 0.00 0.00 0.00 3.51
73 81 5.437946 TGTAAGACCACGAGATCAGAGTAT 58.562 41.667 0.00 0.00 0.00 2.12
85 93 3.751175 ACATGAACCATTGTAAGACCACG 59.249 43.478 0.00 0.00 0.00 4.94
108 116 2.981400 AAATTGGTGCGTTCCGTAAG 57.019 45.000 0.00 0.00 0.00 2.34
113 121 3.297830 AGCTAAAAATTGGTGCGTTCC 57.702 42.857 0.00 0.00 0.00 3.62
151 159 7.041107 GGCTGGCAAAACTAATCAAAATATCA 58.959 34.615 0.00 0.00 0.00 2.15
153 161 7.186570 AGGCTGGCAAAACTAATCAAAATAT 57.813 32.000 3.38 0.00 0.00 1.28
154 162 6.603940 AGGCTGGCAAAACTAATCAAAATA 57.396 33.333 3.38 0.00 0.00 1.40
155 163 5.488262 AGGCTGGCAAAACTAATCAAAAT 57.512 34.783 3.38 0.00 0.00 1.82
156 164 4.953940 AGGCTGGCAAAACTAATCAAAA 57.046 36.364 3.38 0.00 0.00 2.44
157 165 5.076873 AGTAGGCTGGCAAAACTAATCAAA 58.923 37.500 3.38 0.00 0.00 2.69
158 166 4.662278 AGTAGGCTGGCAAAACTAATCAA 58.338 39.130 3.38 0.00 0.00 2.57
159 167 4.301072 AGTAGGCTGGCAAAACTAATCA 57.699 40.909 3.38 0.00 0.00 2.57
160 168 5.644977 AAAGTAGGCTGGCAAAACTAATC 57.355 39.130 3.38 0.00 0.00 1.75
161 169 7.147897 GGATAAAAGTAGGCTGGCAAAACTAAT 60.148 37.037 3.38 0.07 0.00 1.73
162 170 6.152154 GGATAAAAGTAGGCTGGCAAAACTAA 59.848 38.462 3.38 0.00 0.00 2.24
163 171 5.650703 GGATAAAAGTAGGCTGGCAAAACTA 59.349 40.000 3.38 0.00 0.00 2.24
164 172 4.462834 GGATAAAAGTAGGCTGGCAAAACT 59.537 41.667 3.38 0.99 0.00 2.66
165 173 4.219725 TGGATAAAAGTAGGCTGGCAAAAC 59.780 41.667 3.38 0.00 0.00 2.43
166 174 4.411927 TGGATAAAAGTAGGCTGGCAAAA 58.588 39.130 3.38 0.00 0.00 2.44
167 175 4.040936 TGGATAAAAGTAGGCTGGCAAA 57.959 40.909 3.38 0.00 0.00 3.68
168 176 3.730215 TGGATAAAAGTAGGCTGGCAA 57.270 42.857 3.38 0.00 0.00 4.52
169 177 3.951563 ATGGATAAAAGTAGGCTGGCA 57.048 42.857 3.38 0.00 0.00 4.92
170 178 6.321435 AGTTTAATGGATAAAAGTAGGCTGGC 59.679 38.462 0.00 0.00 35.33 4.85
171 179 7.881775 AGTTTAATGGATAAAAGTAGGCTGG 57.118 36.000 0.00 0.00 35.33 4.85
221 229 9.601217 GATGTGATTAACAAATACTACCTCTGT 57.399 33.333 0.00 0.00 43.61 3.41
222 230 9.599866 TGATGTGATTAACAAATACTACCTCTG 57.400 33.333 0.00 0.00 43.61 3.35
251 259 7.510549 AGCTATTCAATTAACGCCATTATGT 57.489 32.000 0.00 0.00 0.00 2.29
294 302 7.446769 TGCACTATTAAGAAGTAAGAACCACA 58.553 34.615 0.00 0.00 0.00 4.17
372 423 6.067217 ACATTTTTAGTCATCCAGCCTAGT 57.933 37.500 0.00 0.00 0.00 2.57
373 424 6.599244 TCAACATTTTTAGTCATCCAGCCTAG 59.401 38.462 0.00 0.00 0.00 3.02
374 425 6.480763 TCAACATTTTTAGTCATCCAGCCTA 58.519 36.000 0.00 0.00 0.00 3.93
375 426 5.324409 TCAACATTTTTAGTCATCCAGCCT 58.676 37.500 0.00 0.00 0.00 4.58
376 427 5.643379 TCAACATTTTTAGTCATCCAGCC 57.357 39.130 0.00 0.00 0.00 4.85
377 428 9.807649 ATAAATCAACATTTTTAGTCATCCAGC 57.192 29.630 0.00 0.00 33.95 4.85
391 442 9.930693 GCCTAGTACTAGCTATAAATCAACATT 57.069 33.333 22.39 0.00 31.95 2.71
392 443 9.315363 AGCCTAGTACTAGCTATAAATCAACAT 57.685 33.333 22.39 0.00 31.95 2.71
393 444 8.577296 CAGCCTAGTACTAGCTATAAATCAACA 58.423 37.037 22.39 0.00 31.95 3.33
394 445 8.030106 CCAGCCTAGTACTAGCTATAAATCAAC 58.970 40.741 22.39 2.13 31.95 3.18
395 446 7.948447 TCCAGCCTAGTACTAGCTATAAATCAA 59.052 37.037 22.39 0.00 31.95 2.57
396 447 7.467650 TCCAGCCTAGTACTAGCTATAAATCA 58.532 38.462 22.39 0.00 31.95 2.57
397 448 7.941431 TCCAGCCTAGTACTAGCTATAAATC 57.059 40.000 22.39 5.36 31.95 2.17
398 449 8.116669 TCATCCAGCCTAGTACTAGCTATAAAT 58.883 37.037 22.39 9.44 31.95 1.40
399 450 7.393796 GTCATCCAGCCTAGTACTAGCTATAAA 59.606 40.741 22.39 7.73 31.95 1.40
400 451 6.885376 GTCATCCAGCCTAGTACTAGCTATAA 59.115 42.308 22.39 9.13 31.95 0.98
401 452 6.215841 AGTCATCCAGCCTAGTACTAGCTATA 59.784 42.308 22.39 14.09 31.95 1.31
402 453 5.014755 AGTCATCCAGCCTAGTACTAGCTAT 59.985 44.000 22.39 12.07 31.95 2.97
403 454 4.351407 AGTCATCCAGCCTAGTACTAGCTA 59.649 45.833 22.39 10.59 31.95 3.32
404 455 3.139397 AGTCATCCAGCCTAGTACTAGCT 59.861 47.826 22.39 19.03 31.95 3.32
405 456 3.492337 AGTCATCCAGCCTAGTACTAGC 58.508 50.000 22.39 17.35 31.95 3.42
406 457 7.584122 TTTTAGTCATCCAGCCTAGTACTAG 57.416 40.000 21.11 21.11 0.00 2.57
407 458 7.966339 TTTTTAGTCATCCAGCCTAGTACTA 57.034 36.000 1.89 1.89 0.00 1.82
408 459 6.869206 TTTTTAGTCATCCAGCCTAGTACT 57.131 37.500 0.00 0.00 0.00 2.73
449 500 7.195374 ACATTTTTAGTCATCCAGCCTAGTA 57.805 36.000 0.00 0.00 0.00 1.82
450 501 6.067217 ACATTTTTAGTCATCCAGCCTAGT 57.933 37.500 0.00 0.00 0.00 2.57
451 502 6.599244 TCAACATTTTTAGTCATCCAGCCTAG 59.401 38.462 0.00 0.00 0.00 3.02
452 503 6.480763 TCAACATTTTTAGTCATCCAGCCTA 58.519 36.000 0.00 0.00 0.00 3.93
453 504 5.324409 TCAACATTTTTAGTCATCCAGCCT 58.676 37.500 0.00 0.00 0.00 4.58
454 505 5.643379 TCAACATTTTTAGTCATCCAGCC 57.357 39.130 0.00 0.00 0.00 4.85
455 506 9.807649 ATAAATCAACATTTTTAGTCATCCAGC 57.192 29.630 0.00 0.00 33.95 4.85
472 523 9.694137 CCAGCCTAGTACTAGTTATAAATCAAC 57.306 37.037 24.84 0.00 0.00 3.18
473 524 9.650714 TCCAGCCTAGTACTAGTTATAAATCAA 57.349 33.333 24.84 1.57 0.00 2.57
474 525 9.824216 ATCCAGCCTAGTACTAGTTATAAATCA 57.176 33.333 24.84 4.03 0.00 2.57
476 527 9.603189 ACATCCAGCCTAGTACTAGTTATAAAT 57.397 33.333 24.84 10.77 0.00 1.40
477 528 9.075678 GACATCCAGCCTAGTACTAGTTATAAA 57.924 37.037 24.84 9.18 0.00 1.40
478 529 7.668886 GGACATCCAGCCTAGTACTAGTTATAA 59.331 40.741 24.84 10.54 35.64 0.98
479 530 7.173722 GGACATCCAGCCTAGTACTAGTTATA 58.826 42.308 24.84 9.62 35.64 0.98
480 531 6.011481 GGACATCCAGCCTAGTACTAGTTAT 58.989 44.000 24.84 10.25 35.64 1.89
481 532 5.103813 TGGACATCCAGCCTAGTACTAGTTA 60.104 44.000 24.84 8.70 42.01 2.24
482 533 4.216708 GGACATCCAGCCTAGTACTAGTT 58.783 47.826 24.84 12.47 35.64 2.24
483 534 3.204606 TGGACATCCAGCCTAGTACTAGT 59.795 47.826 24.84 8.03 42.01 2.57
484 535 3.833732 TGGACATCCAGCCTAGTACTAG 58.166 50.000 21.11 21.11 42.01 2.57
485 536 3.965470 TGGACATCCAGCCTAGTACTA 57.035 47.619 1.89 1.89 42.01 1.82
486 537 2.848678 TGGACATCCAGCCTAGTACT 57.151 50.000 0.00 0.00 42.01 2.73
548 756 3.756434 GCAACTATGCCTACCAAAGTTGA 59.244 43.478 15.56 0.00 46.29 3.18
784 1027 7.283625 AGCAATGTTTCTGGTAATAACACAA 57.716 32.000 0.00 0.00 34.90 3.33
889 1143 4.022935 ACATCGATGAGCACAAAAACACAT 60.023 37.500 31.33 0.07 0.00 3.21
1265 1519 3.858638 AGGTCAGGATACCCCTTTTTGAT 59.141 43.478 0.00 0.00 44.85 2.57
1532 1786 2.145536 GAAAATGGACACGTACCGGTT 58.854 47.619 15.04 0.00 0.00 4.44
1552 1806 5.604650 AGATAAACCCATCTTGAGTAGGGAG 59.395 44.000 14.43 0.00 44.30 4.30
1575 1829 7.845037 TGACTGATGAAGGGATATAAGCATAG 58.155 38.462 0.00 0.00 0.00 2.23
1579 1833 6.939163 ACAATGACTGATGAAGGGATATAAGC 59.061 38.462 0.00 0.00 0.00 3.09
1676 2127 4.705507 GGAAGTGCATATCCCTCGTAGATA 59.294 45.833 9.07 0.00 33.89 1.98
2111 2562 0.035725 CCTTGCTCATCCTGTCTGCA 60.036 55.000 0.00 0.00 0.00 4.41
2114 2565 2.244486 TCTCCTTGCTCATCCTGTCT 57.756 50.000 0.00 0.00 0.00 3.41
2165 2616 3.766691 GGAGGCGCCACGACCTTA 61.767 66.667 31.54 0.00 34.11 2.69
2183 2634 3.074687 TCCAGACACTGTACTTCCTCTCT 59.925 47.826 0.00 0.00 0.00 3.10
2261 2716 4.608948 ACACACCCTGACAAAACAAAAA 57.391 36.364 0.00 0.00 0.00 1.94
2281 2740 7.116736 TCTTTTTCCCCAGAATAAGATGGTAC 58.883 38.462 5.07 0.00 41.93 3.34
2333 2796 9.521841 TGGTTGGTTCATGTAATAAGATGTTAA 57.478 29.630 0.00 0.00 0.00 2.01
2350 2813 3.733443 AATTTGCTGTCTGGTTGGTTC 57.267 42.857 0.00 0.00 0.00 3.62
2362 2826 8.650714 GCTTTGTAGGAAAAGATTAATTTGCTG 58.349 33.333 4.78 0.00 38.63 4.41
2402 2866 6.430000 GGTACTTTCTTCATAAGCTGGAAACA 59.570 38.462 0.00 0.00 39.59 2.83
2414 2878 5.520748 AACATCAGGGGTACTTTCTTCAT 57.479 39.130 0.00 0.00 0.00 2.57
2441 2905 4.357097 AGGGATCAGGGGTACTTTCTTTTT 59.643 41.667 0.00 0.00 0.00 1.94
2442 2906 3.923425 AGGGATCAGGGGTACTTTCTTTT 59.077 43.478 0.00 0.00 0.00 2.27
2443 2907 3.542604 AGGGATCAGGGGTACTTTCTTT 58.457 45.455 0.00 0.00 0.00 2.52
2444 2908 3.222394 AGGGATCAGGGGTACTTTCTT 57.778 47.619 0.00 0.00 0.00 2.52
2445 2909 2.972153 AGGGATCAGGGGTACTTTCT 57.028 50.000 0.00 0.00 0.00 2.52
2446 2910 5.045066 AGTTAAAGGGATCAGGGGTACTTTC 60.045 44.000 0.00 0.00 31.43 2.62
2447 2911 4.856182 AGTTAAAGGGATCAGGGGTACTTT 59.144 41.667 0.00 0.00 33.32 2.66
2448 2912 4.445564 AGTTAAAGGGATCAGGGGTACTT 58.554 43.478 0.00 0.00 0.00 2.24
2449 2913 4.090027 AGTTAAAGGGATCAGGGGTACT 57.910 45.455 0.00 0.00 0.00 2.73
2450 2914 4.857130 AAGTTAAAGGGATCAGGGGTAC 57.143 45.455 0.00 0.00 0.00 3.34
2451 2915 5.576128 CAAAAGTTAAAGGGATCAGGGGTA 58.424 41.667 0.00 0.00 0.00 3.69
2452 2916 4.416516 CAAAAGTTAAAGGGATCAGGGGT 58.583 43.478 0.00 0.00 0.00 4.95
2453 2917 3.195610 GCAAAAGTTAAAGGGATCAGGGG 59.804 47.826 0.00 0.00 0.00 4.79
2454 2918 3.831911 TGCAAAAGTTAAAGGGATCAGGG 59.168 43.478 0.00 0.00 0.00 4.45
2455 2919 4.766891 TCTGCAAAAGTTAAAGGGATCAGG 59.233 41.667 0.00 0.00 0.00 3.86
2456 2920 5.964958 TCTGCAAAAGTTAAAGGGATCAG 57.035 39.130 0.00 0.00 0.00 2.90
2457 2921 5.774690 ACATCTGCAAAAGTTAAAGGGATCA 59.225 36.000 0.00 0.00 0.00 2.92
2458 2922 6.095377 CACATCTGCAAAAGTTAAAGGGATC 58.905 40.000 0.00 0.00 0.00 3.36
2459 2923 5.047092 CCACATCTGCAAAAGTTAAAGGGAT 60.047 40.000 0.00 0.00 0.00 3.85
2467 2931 5.263599 TGGATATCCACATCTGCAAAAGTT 58.736 37.500 20.98 0.00 42.01 2.66
2468 2932 4.858850 TGGATATCCACATCTGCAAAAGT 58.141 39.130 20.98 0.00 42.01 2.66
2504 2968 1.748329 CGATCGAGGGGCCAGATTCA 61.748 60.000 10.26 0.00 0.00 2.57
2554 3018 3.075884 AGAGAGACACGGAGTAAGACAC 58.924 50.000 0.00 0.00 41.61 3.67
2556 3020 2.159490 GCAGAGAGACACGGAGTAAGAC 60.159 54.545 0.00 0.00 41.61 3.01
2557 3021 2.085320 GCAGAGAGACACGGAGTAAGA 58.915 52.381 0.00 0.00 41.61 2.10
2558 3022 1.813178 TGCAGAGAGACACGGAGTAAG 59.187 52.381 0.00 0.00 41.61 2.34
2559 3023 1.540267 GTGCAGAGAGACACGGAGTAA 59.460 52.381 0.00 0.00 41.61 2.24
2560 3024 1.166129 GTGCAGAGAGACACGGAGTA 58.834 55.000 0.00 0.00 41.61 2.59
2563 3027 1.040646 AAAGTGCAGAGAGACACGGA 58.959 50.000 0.00 0.00 41.72 4.69
2564 3028 1.795286 GAAAAGTGCAGAGAGACACGG 59.205 52.381 0.00 0.00 41.72 4.94
2565 3029 1.795286 GGAAAAGTGCAGAGAGACACG 59.205 52.381 0.00 0.00 41.72 4.49
2638 3112 2.426752 CGAAAACGGCCGCACAAG 60.427 61.111 28.58 10.88 0.00 3.16
2662 3136 6.183360 CCTTCATCCACAAGGTAATGCTAAAG 60.183 42.308 0.00 0.00 36.40 1.85
2666 3140 3.266772 TCCTTCATCCACAAGGTAATGCT 59.733 43.478 0.00 0.00 41.28 3.79
2672 3146 4.184649 ACTTTTCCTTCATCCACAAGGT 57.815 40.909 0.00 0.00 41.28 3.50
2675 3149 5.313712 GACCTACTTTTCCTTCATCCACAA 58.686 41.667 0.00 0.00 0.00 3.33
2747 3222 7.360101 CGGCTAAATATCAACCAACATAGTAGC 60.360 40.741 0.00 0.00 0.00 3.58
2846 3323 2.596904 ATACATACACACCCAGCGTC 57.403 50.000 0.00 0.00 0.00 5.19
2920 3410 3.988819 GCTGACCAAAGCAACCAAATAA 58.011 40.909 0.00 0.00 43.01 1.40
2991 3482 4.621991 GGAAACTTCCCTTTTCTTCTTGC 58.378 43.478 0.00 0.00 41.62 4.01
3005 3510 8.041919 AGGCACTAATACTTTCTAGGAAACTTC 58.958 37.037 0.00 0.00 38.77 3.01
3051 3556 7.819415 ACATCATACATACATACATACTGCCAC 59.181 37.037 0.00 0.00 0.00 5.01
3066 3571 8.835439 ACACATTTCGCATAAACATCATACATA 58.165 29.630 0.00 0.00 0.00 2.29
3067 3572 7.644945 CACACATTTCGCATAAACATCATACAT 59.355 33.333 0.00 0.00 0.00 2.29
3068 3573 6.966066 CACACATTTCGCATAAACATCATACA 59.034 34.615 0.00 0.00 0.00 2.29
3069 3574 6.075415 GCACACATTTCGCATAAACATCATAC 60.075 38.462 0.00 0.00 0.00 2.39
3070 3575 5.970612 GCACACATTTCGCATAAACATCATA 59.029 36.000 0.00 0.00 0.00 2.15
3071 3576 4.799949 GCACACATTTCGCATAAACATCAT 59.200 37.500 0.00 0.00 0.00 2.45
3072 3577 4.165036 GCACACATTTCGCATAAACATCA 58.835 39.130 0.00 0.00 0.00 3.07
3073 3578 3.547468 GGCACACATTTCGCATAAACATC 59.453 43.478 0.00 0.00 0.00 3.06
3124 3629 6.011362 TCAAAGCAGATGGATGGGGATATAAT 60.011 38.462 0.00 0.00 0.00 1.28
3125 3630 5.312974 TCAAAGCAGATGGATGGGGATATAA 59.687 40.000 0.00 0.00 0.00 0.98
3126 3631 4.851540 TCAAAGCAGATGGATGGGGATATA 59.148 41.667 0.00 0.00 0.00 0.86
3127 3632 3.659195 TCAAAGCAGATGGATGGGGATAT 59.341 43.478 0.00 0.00 0.00 1.63
3128 3633 3.055328 TCAAAGCAGATGGATGGGGATA 58.945 45.455 0.00 0.00 0.00 2.59
3129 3634 1.854939 TCAAAGCAGATGGATGGGGAT 59.145 47.619 0.00 0.00 0.00 3.85
3156 3661 2.292916 GCGACAAAAACACAGGCGC 61.293 57.895 0.00 0.00 36.12 6.53
3157 3662 1.657181 GGCGACAAAAACACAGGCG 60.657 57.895 0.00 0.00 0.00 5.52
3158 3663 0.317854 GAGGCGACAAAAACACAGGC 60.318 55.000 0.00 0.00 0.00 4.85
3159 3664 0.310854 GGAGGCGACAAAAACACAGG 59.689 55.000 0.00 0.00 0.00 4.00
3160 3665 1.021202 TGGAGGCGACAAAAACACAG 58.979 50.000 0.00 0.00 0.00 3.66
3161 3666 1.464734 TTGGAGGCGACAAAAACACA 58.535 45.000 0.00 0.00 0.00 3.72
3162 3667 2.034053 TCATTGGAGGCGACAAAAACAC 59.966 45.455 0.00 0.00 0.00 3.32
3166 3671 3.826157 AGAAATCATTGGAGGCGACAAAA 59.174 39.130 0.00 0.00 0.00 2.44
3176 3681 7.287466 TGAGGTTCTCAAAAAGAAATCATTGGA 59.713 33.333 0.00 0.00 45.50 3.53
3186 3691 3.738982 TCGCATGAGGTTCTCAAAAAGA 58.261 40.909 0.00 0.00 44.04 2.52
3187 3692 4.075763 CTCGCATGAGGTTCTCAAAAAG 57.924 45.455 0.00 0.00 44.04 2.27
3199 3704 1.903877 AACCCCTGTCCTCGCATGAG 61.904 60.000 0.00 0.00 42.18 2.90
3200 3705 1.488705 AAACCCCTGTCCTCGCATGA 61.489 55.000 0.00 0.00 0.00 3.07
3201 3706 1.002134 AAACCCCTGTCCTCGCATG 60.002 57.895 0.00 0.00 0.00 4.06
3202 3707 1.299976 GAAACCCCTGTCCTCGCAT 59.700 57.895 0.00 0.00 0.00 4.73
3203 3708 2.747686 GAAACCCCTGTCCTCGCA 59.252 61.111 0.00 0.00 0.00 5.10
3205 3710 3.807368 AGGAAACCCCTGTCCTCG 58.193 61.111 0.00 0.00 45.61 4.63
3215 3720 3.135994 TCTTAACGAACTGCAGGAAACC 58.864 45.455 19.93 0.95 0.00 3.27
3216 3721 4.510340 TCTTCTTAACGAACTGCAGGAAAC 59.490 41.667 19.93 5.22 0.00 2.78
3217 3722 4.699637 TCTTCTTAACGAACTGCAGGAAA 58.300 39.130 19.93 1.89 0.00 3.13
3218 3723 4.330944 TCTTCTTAACGAACTGCAGGAA 57.669 40.909 19.93 8.05 0.00 3.36
3219 3724 4.330944 TTCTTCTTAACGAACTGCAGGA 57.669 40.909 19.93 0.00 0.00 3.86
3220 3725 4.750098 TCTTTCTTCTTAACGAACTGCAGG 59.250 41.667 19.93 2.38 0.00 4.85
3221 3726 5.907197 TCTTTCTTCTTAACGAACTGCAG 57.093 39.130 13.48 13.48 0.00 4.41
3222 3727 5.989168 TCATCTTTCTTCTTAACGAACTGCA 59.011 36.000 0.00 0.00 0.00 4.41
3223 3728 6.467723 TCATCTTTCTTCTTAACGAACTGC 57.532 37.500 0.00 0.00 0.00 4.40
3224 3729 7.463383 CGGATCATCTTTCTTCTTAACGAACTG 60.463 40.741 0.00 0.00 0.00 3.16
3225 3730 6.531948 CGGATCATCTTTCTTCTTAACGAACT 59.468 38.462 0.00 0.00 0.00 3.01
3226 3731 6.530534 TCGGATCATCTTTCTTCTTAACGAAC 59.469 38.462 0.00 0.00 0.00 3.95
3227 3732 6.627243 TCGGATCATCTTTCTTCTTAACGAA 58.373 36.000 0.00 0.00 0.00 3.85
3228 3733 6.203808 TCGGATCATCTTTCTTCTTAACGA 57.796 37.500 0.00 0.00 0.00 3.85
3229 3734 6.477033 ACATCGGATCATCTTTCTTCTTAACG 59.523 38.462 0.00 0.00 0.00 3.18
3230 3735 7.778470 ACATCGGATCATCTTTCTTCTTAAC 57.222 36.000 0.00 0.00 0.00 2.01
3233 3738 8.865090 AGTATACATCGGATCATCTTTCTTCTT 58.135 33.333 5.50 0.00 0.00 2.52
3234 3739 8.415950 AGTATACATCGGATCATCTTTCTTCT 57.584 34.615 5.50 0.00 0.00 2.85
3235 3740 8.300286 TGAGTATACATCGGATCATCTTTCTTC 58.700 37.037 5.50 0.00 0.00 2.87
3236 3741 8.183104 TGAGTATACATCGGATCATCTTTCTT 57.817 34.615 5.50 0.00 0.00 2.52
3237 3742 7.576666 GCTGAGTATACATCGGATCATCTTTCT 60.577 40.741 5.50 0.00 0.00 2.52
3238 3743 6.529829 GCTGAGTATACATCGGATCATCTTTC 59.470 42.308 5.50 0.00 0.00 2.62
3239 3744 6.210385 AGCTGAGTATACATCGGATCATCTTT 59.790 38.462 5.50 0.00 0.00 2.52
3240 3745 5.714333 AGCTGAGTATACATCGGATCATCTT 59.286 40.000 5.50 0.00 0.00 2.40
3241 3746 5.125257 CAGCTGAGTATACATCGGATCATCT 59.875 44.000 8.42 0.00 0.00 2.90
3242 3747 5.339177 CAGCTGAGTATACATCGGATCATC 58.661 45.833 8.42 0.00 0.00 2.92
3243 3748 4.159321 CCAGCTGAGTATACATCGGATCAT 59.841 45.833 17.39 0.00 0.00 2.45
3244 3749 3.507622 CCAGCTGAGTATACATCGGATCA 59.492 47.826 17.39 0.00 0.00 2.92
3245 3750 3.759086 TCCAGCTGAGTATACATCGGATC 59.241 47.826 17.39 0.00 0.00 3.36
3246 3751 3.767711 TCCAGCTGAGTATACATCGGAT 58.232 45.455 17.39 1.28 0.00 4.18
3247 3752 3.223674 TCCAGCTGAGTATACATCGGA 57.776 47.619 17.39 0.00 0.00 4.55
3248 3753 5.644977 TTATCCAGCTGAGTATACATCGG 57.355 43.478 17.39 6.27 0.00 4.18
3249 3754 5.569441 CGTTTATCCAGCTGAGTATACATCG 59.431 44.000 17.39 9.98 0.00 3.84
3250 3755 5.864474 CCGTTTATCCAGCTGAGTATACATC 59.136 44.000 17.39 0.87 0.00 3.06
3251 3756 5.279506 CCCGTTTATCCAGCTGAGTATACAT 60.280 44.000 17.39 0.00 0.00 2.29
3252 3757 4.038763 CCCGTTTATCCAGCTGAGTATACA 59.961 45.833 17.39 0.56 0.00 2.29
3253 3758 4.557205 CCCGTTTATCCAGCTGAGTATAC 58.443 47.826 17.39 11.23 0.00 1.47
3254 3759 3.006537 GCCCGTTTATCCAGCTGAGTATA 59.993 47.826 17.39 7.27 0.00 1.47
3255 3760 2.224305 GCCCGTTTATCCAGCTGAGTAT 60.224 50.000 17.39 8.31 0.00 2.12
3256 3761 1.138266 GCCCGTTTATCCAGCTGAGTA 59.862 52.381 17.39 4.50 0.00 2.59
3257 3762 0.107654 GCCCGTTTATCCAGCTGAGT 60.108 55.000 17.39 5.61 0.00 3.41
3258 3763 1.154205 CGCCCGTTTATCCAGCTGAG 61.154 60.000 17.39 5.49 0.00 3.35
3259 3764 1.153449 CGCCCGTTTATCCAGCTGA 60.153 57.895 17.39 1.21 0.00 4.26
3260 3765 2.180204 CCGCCCGTTTATCCAGCTG 61.180 63.158 6.78 6.78 0.00 4.24
3261 3766 2.189521 CCGCCCGTTTATCCAGCT 59.810 61.111 0.00 0.00 0.00 4.24
3262 3767 1.310216 AAACCGCCCGTTTATCCAGC 61.310 55.000 0.00 0.00 43.03 4.85
3263 3768 1.170442 AAAACCGCCCGTTTATCCAG 58.830 50.000 0.00 0.00 44.09 3.86
3264 3769 1.540707 GAAAAACCGCCCGTTTATCCA 59.459 47.619 0.00 0.00 44.09 3.41
3265 3770 1.135315 GGAAAAACCGCCCGTTTATCC 60.135 52.381 0.00 0.00 44.09 2.59
3266 3771 1.814394 AGGAAAAACCGCCCGTTTATC 59.186 47.619 0.00 0.00 44.09 1.75
3267 3772 1.814394 GAGGAAAAACCGCCCGTTTAT 59.186 47.619 0.00 0.00 44.09 1.40
3268 3773 1.237533 GAGGAAAAACCGCCCGTTTA 58.762 50.000 0.00 0.00 44.09 2.01
3269 3774 1.788067 CGAGGAAAAACCGCCCGTTT 61.788 55.000 0.00 0.00 46.92 3.60
3270 3775 2.255881 CGAGGAAAAACCGCCCGTT 61.256 57.895 0.00 0.00 44.74 4.44
3271 3776 2.459202 ATCGAGGAAAAACCGCCCGT 62.459 55.000 0.00 0.00 44.74 5.28
3272 3777 1.743995 ATCGAGGAAAAACCGCCCG 60.744 57.895 0.00 0.00 44.74 6.13
3273 3778 1.654023 CCATCGAGGAAAAACCGCCC 61.654 60.000 0.00 0.00 44.74 6.13
3274 3779 1.800681 CCATCGAGGAAAAACCGCC 59.199 57.895 0.00 0.00 44.74 6.13
3275 3780 1.136774 GCCATCGAGGAAAAACCGC 59.863 57.895 0.00 0.00 44.74 5.68
3276 3781 0.447801 CTGCCATCGAGGAAAAACCG 59.552 55.000 0.00 0.00 44.74 4.44
3277 3782 0.171231 GCTGCCATCGAGGAAAAACC 59.829 55.000 0.00 0.00 41.22 3.27
3278 3783 1.135575 CAGCTGCCATCGAGGAAAAAC 60.136 52.381 0.00 0.00 41.22 2.43
3279 3784 1.167851 CAGCTGCCATCGAGGAAAAA 58.832 50.000 0.00 0.00 41.22 1.94
3280 3785 1.308069 GCAGCTGCCATCGAGGAAAA 61.308 55.000 28.76 0.00 41.22 2.29
3281 3786 1.746615 GCAGCTGCCATCGAGGAAA 60.747 57.895 28.76 0.00 41.22 3.13
3282 3787 2.124983 GCAGCTGCCATCGAGGAA 60.125 61.111 28.76 0.00 41.22 3.36
3283 3788 3.079478 AGCAGCTGCCATCGAGGA 61.079 61.111 34.39 0.00 43.38 3.71
3284 3789 2.588314 GAGCAGCTGCCATCGAGG 60.588 66.667 34.39 0.00 43.38 4.63
3285 3790 2.588314 GGAGCAGCTGCCATCGAG 60.588 66.667 34.39 0.00 43.38 4.04
3286 3791 1.402107 TATGGAGCAGCTGCCATCGA 61.402 55.000 34.39 23.17 43.56 3.59
3287 3792 0.321387 ATATGGAGCAGCTGCCATCG 60.321 55.000 34.39 0.00 43.56 3.84
3288 3793 1.906990 AATATGGAGCAGCTGCCATC 58.093 50.000 34.39 25.24 43.56 3.51
3289 3794 3.245158 ACATAATATGGAGCAGCTGCCAT 60.245 43.478 34.39 29.86 46.21 4.40
3290 3795 2.107031 ACATAATATGGAGCAGCTGCCA 59.893 45.455 34.39 25.76 36.71 4.92
3291 3796 2.787994 ACATAATATGGAGCAGCTGCC 58.212 47.619 34.39 24.38 36.71 4.85
3292 3797 3.817084 TCAACATAATATGGAGCAGCTGC 59.183 43.478 31.53 31.53 36.44 5.25
3293 3798 7.860918 ATATCAACATAATATGGAGCAGCTG 57.139 36.000 10.11 10.11 33.60 4.24
3294 3799 8.737175 CAAATATCAACATAATATGGAGCAGCT 58.263 33.333 5.16 0.00 33.60 4.24
3295 3800 8.517878 ACAAATATCAACATAATATGGAGCAGC 58.482 33.333 5.16 0.00 33.60 5.25
3296 3801 9.836076 CACAAATATCAACATAATATGGAGCAG 57.164 33.333 5.16 0.00 33.60 4.24
3297 3802 9.353431 ACACAAATATCAACATAATATGGAGCA 57.647 29.630 5.16 0.00 33.60 4.26
3298 3803 9.831737 GACACAAATATCAACATAATATGGAGC 57.168 33.333 5.16 0.00 33.60 4.70
3300 3805 9.859152 TGGACACAAATATCAACATAATATGGA 57.141 29.630 5.16 0.00 33.60 3.41
3303 3808 8.796475 GCCTGGACACAAATATCAACATAATAT 58.204 33.333 0.00 0.00 0.00 1.28
3304 3809 7.777440 TGCCTGGACACAAATATCAACATAATA 59.223 33.333 0.00 0.00 0.00 0.98
3305 3810 6.606796 TGCCTGGACACAAATATCAACATAAT 59.393 34.615 0.00 0.00 0.00 1.28
3306 3811 5.948758 TGCCTGGACACAAATATCAACATAA 59.051 36.000 0.00 0.00 0.00 1.90
3307 3812 5.504853 TGCCTGGACACAAATATCAACATA 58.495 37.500 0.00 0.00 0.00 2.29
3308 3813 4.343231 TGCCTGGACACAAATATCAACAT 58.657 39.130 0.00 0.00 0.00 2.71
3309 3814 3.760738 TGCCTGGACACAAATATCAACA 58.239 40.909 0.00 0.00 0.00 3.33
3310 3815 4.218417 AGTTGCCTGGACACAAATATCAAC 59.782 41.667 0.00 0.00 33.55 3.18
3311 3816 4.406456 AGTTGCCTGGACACAAATATCAA 58.594 39.130 0.00 0.00 0.00 2.57
3312 3817 4.032960 AGTTGCCTGGACACAAATATCA 57.967 40.909 0.00 0.00 0.00 2.15
3313 3818 4.380867 CCAAGTTGCCTGGACACAAATATC 60.381 45.833 0.00 0.00 0.00 1.63
3314 3819 3.511146 CCAAGTTGCCTGGACACAAATAT 59.489 43.478 0.00 0.00 0.00 1.28
3315 3820 2.890311 CCAAGTTGCCTGGACACAAATA 59.110 45.455 0.00 0.00 0.00 1.40
3316 3821 1.688197 CCAAGTTGCCTGGACACAAAT 59.312 47.619 0.00 0.00 0.00 2.32
3317 3822 1.110442 CCAAGTTGCCTGGACACAAA 58.890 50.000 0.00 0.00 0.00 2.83
3318 3823 0.033601 ACCAAGTTGCCTGGACACAA 60.034 50.000 0.00 0.00 0.00 3.33
3319 3824 0.033601 AACCAAGTTGCCTGGACACA 60.034 50.000 0.00 0.00 0.00 3.72
3320 3825 0.668535 GAACCAAGTTGCCTGGACAC 59.331 55.000 0.00 0.00 0.00 3.67
3321 3826 0.550914 AGAACCAAGTTGCCTGGACA 59.449 50.000 0.00 0.00 0.00 4.02
3322 3827 1.202818 AGAGAACCAAGTTGCCTGGAC 60.203 52.381 0.00 0.00 0.00 4.02
3323 3828 1.072331 GAGAGAACCAAGTTGCCTGGA 59.928 52.381 0.00 0.00 0.00 3.86
3324 3829 1.528129 GAGAGAACCAAGTTGCCTGG 58.472 55.000 0.00 0.00 0.00 4.45
3325 3830 1.151668 CGAGAGAACCAAGTTGCCTG 58.848 55.000 0.00 0.00 0.00 4.85
3326 3831 0.035458 CCGAGAGAACCAAGTTGCCT 59.965 55.000 0.00 0.00 0.00 4.75
3327 3832 0.034896 TCCGAGAGAACCAAGTTGCC 59.965 55.000 0.00 0.00 0.00 4.52
3328 3833 1.270358 ACTCCGAGAGAACCAAGTTGC 60.270 52.381 1.33 0.00 33.32 4.17
3329 3834 2.821991 ACTCCGAGAGAACCAAGTTG 57.178 50.000 1.33 0.00 33.32 3.16
3330 3835 5.221661 ACAATAACTCCGAGAGAACCAAGTT 60.222 40.000 1.33 0.00 33.32 2.66
3331 3836 4.283722 ACAATAACTCCGAGAGAACCAAGT 59.716 41.667 1.33 0.00 33.32 3.16
3332 3837 4.822026 ACAATAACTCCGAGAGAACCAAG 58.178 43.478 1.33 0.00 33.32 3.61
3333 3838 4.884668 ACAATAACTCCGAGAGAACCAA 57.115 40.909 1.33 0.00 33.32 3.67
3334 3839 5.014858 AGTACAATAACTCCGAGAGAACCA 58.985 41.667 1.33 0.00 33.32 3.67
3335 3840 5.579564 AGTACAATAACTCCGAGAGAACC 57.420 43.478 1.33 0.00 33.32 3.62
3361 3866 9.014297 GCTACAATATTGGCATTCCTATTAAGT 57.986 33.333 19.37 0.00 0.00 2.24
3362 3867 9.236006 AGCTACAATATTGGCATTCCTATTAAG 57.764 33.333 19.37 0.39 0.00 1.85
3363 3868 9.231297 GAGCTACAATATTGGCATTCCTATTAA 57.769 33.333 19.37 0.00 0.00 1.40
3364 3869 8.382405 TGAGCTACAATATTGGCATTCCTATTA 58.618 33.333 19.37 0.00 0.00 0.98
3365 3870 7.233632 TGAGCTACAATATTGGCATTCCTATT 58.766 34.615 19.37 0.00 0.00 1.73
3366 3871 6.782986 TGAGCTACAATATTGGCATTCCTAT 58.217 36.000 19.37 0.00 0.00 2.57
3367 3872 6.186420 TGAGCTACAATATTGGCATTCCTA 57.814 37.500 19.37 0.58 0.00 2.94
3368 3873 5.052693 TGAGCTACAATATTGGCATTCCT 57.947 39.130 19.37 6.69 0.00 3.36
3369 3874 5.706916 CATGAGCTACAATATTGGCATTCC 58.293 41.667 19.37 5.04 0.00 3.01
3370 3875 5.159209 GCATGAGCTACAATATTGGCATTC 58.841 41.667 19.37 11.54 37.91 2.67
3371 3876 4.021719 GGCATGAGCTACAATATTGGCATT 60.022 41.667 19.37 1.15 41.70 3.56
3372 3877 3.508793 GGCATGAGCTACAATATTGGCAT 59.491 43.478 19.37 11.00 41.70 4.40
3373 3878 2.886523 GGCATGAGCTACAATATTGGCA 59.113 45.455 19.37 9.38 41.70 4.92
3374 3879 3.152341 AGGCATGAGCTACAATATTGGC 58.848 45.455 19.37 13.45 41.70 4.52
3375 3880 7.458409 AATAAGGCATGAGCTACAATATTGG 57.542 36.000 19.37 4.03 41.70 3.16
3380 3885 9.745018 ACATAATAATAAGGCATGAGCTACAAT 57.255 29.630 0.00 0.00 41.70 2.71
3381 3886 9.573166 AACATAATAATAAGGCATGAGCTACAA 57.427 29.630 0.00 0.00 41.70 2.41
3382 3887 9.002600 CAACATAATAATAAGGCATGAGCTACA 57.997 33.333 0.00 0.00 41.70 2.74
3383 3888 9.219603 TCAACATAATAATAAGGCATGAGCTAC 57.780 33.333 0.00 0.00 41.70 3.58
3384 3889 9.964354 ATCAACATAATAATAAGGCATGAGCTA 57.036 29.630 0.00 0.00 41.70 3.32
3385 3890 8.874744 ATCAACATAATAATAAGGCATGAGCT 57.125 30.769 0.00 0.00 41.70 4.09
3400 3905 8.978874 TGCTAGGACACAAATATCAACATAAT 57.021 30.769 0.00 0.00 0.00 1.28
3401 3906 8.673711 GTTGCTAGGACACAAATATCAACATAA 58.326 33.333 0.00 0.00 33.57 1.90
3402 3907 8.046708 AGTTGCTAGGACACAAATATCAACATA 58.953 33.333 0.00 0.00 35.19 2.29
3403 3908 6.886459 AGTTGCTAGGACACAAATATCAACAT 59.114 34.615 0.00 0.00 35.19 2.71
3404 3909 6.237901 AGTTGCTAGGACACAAATATCAACA 58.762 36.000 0.00 0.00 35.19 3.33
3405 3910 6.743575 AGTTGCTAGGACACAAATATCAAC 57.256 37.500 0.00 0.00 33.55 3.18
3406 3911 6.150976 CCAAGTTGCTAGGACACAAATATCAA 59.849 38.462 0.00 0.00 0.00 2.57
3407 3912 5.647658 CCAAGTTGCTAGGACACAAATATCA 59.352 40.000 0.00 0.00 0.00 2.15
3408 3913 5.648092 ACCAAGTTGCTAGGACACAAATATC 59.352 40.000 0.00 0.00 0.00 1.63
3409 3914 5.570320 ACCAAGTTGCTAGGACACAAATAT 58.430 37.500 0.00 0.00 0.00 1.28
3410 3915 4.980573 ACCAAGTTGCTAGGACACAAATA 58.019 39.130 0.00 0.00 0.00 1.40
3411 3916 3.832527 ACCAAGTTGCTAGGACACAAAT 58.167 40.909 0.00 0.00 0.00 2.32
3412 3917 3.290948 ACCAAGTTGCTAGGACACAAA 57.709 42.857 0.00 0.00 0.00 2.83
3413 3918 3.118038 AGAACCAAGTTGCTAGGACACAA 60.118 43.478 0.00 0.00 0.00 3.33
3414 3919 2.438021 AGAACCAAGTTGCTAGGACACA 59.562 45.455 0.00 0.00 0.00 3.72
3415 3920 3.067833 GAGAACCAAGTTGCTAGGACAC 58.932 50.000 0.00 0.00 0.00 3.67
3416 3921 2.972713 AGAGAACCAAGTTGCTAGGACA 59.027 45.455 0.00 0.00 0.00 4.02
3417 3922 3.591023 GAGAGAACCAAGTTGCTAGGAC 58.409 50.000 0.00 0.00 0.00 3.85
3418 3923 2.231478 CGAGAGAACCAAGTTGCTAGGA 59.769 50.000 0.00 0.00 0.00 2.94
3419 3924 2.611518 CGAGAGAACCAAGTTGCTAGG 58.388 52.381 0.00 0.00 0.00 3.02
3420 3925 2.231478 TCCGAGAGAACCAAGTTGCTAG 59.769 50.000 0.00 0.00 0.00 3.42
3421 3926 2.231478 CTCCGAGAGAACCAAGTTGCTA 59.769 50.000 0.00 0.00 0.00 3.49
3422 3927 1.001406 CTCCGAGAGAACCAAGTTGCT 59.999 52.381 0.00 0.00 0.00 3.91
3423 3928 1.270358 ACTCCGAGAGAACCAAGTTGC 60.270 52.381 1.33 0.00 33.32 4.17
3424 3929 2.802816 CAACTCCGAGAGAACCAAGTTG 59.197 50.000 1.33 0.00 33.32 3.16
3425 3930 2.807108 GCAACTCCGAGAGAACCAAGTT 60.807 50.000 1.33 0.00 33.32 2.66
3426 3931 1.270358 GCAACTCCGAGAGAACCAAGT 60.270 52.381 1.33 0.00 33.32 3.16
3427 3932 1.001406 AGCAACTCCGAGAGAACCAAG 59.999 52.381 1.33 0.00 33.32 3.61
3428 3933 1.048601 AGCAACTCCGAGAGAACCAA 58.951 50.000 1.33 0.00 33.32 3.67
3429 3934 0.318441 CAGCAACTCCGAGAGAACCA 59.682 55.000 1.33 0.00 33.32 3.67
3430 3935 0.318762 ACAGCAACTCCGAGAGAACC 59.681 55.000 1.33 0.00 33.32 3.62
3431 3936 3.299340 TTACAGCAACTCCGAGAGAAC 57.701 47.619 1.33 0.00 33.32 3.01
3432 3937 4.245660 CAATTACAGCAACTCCGAGAGAA 58.754 43.478 1.33 0.00 33.32 2.87
3433 3938 3.258372 ACAATTACAGCAACTCCGAGAGA 59.742 43.478 1.33 0.00 33.32 3.10
3434 3939 3.589988 ACAATTACAGCAACTCCGAGAG 58.410 45.455 1.33 0.00 35.52 3.20
3435 3940 3.678056 ACAATTACAGCAACTCCGAGA 57.322 42.857 1.33 0.00 0.00 4.04
3436 3941 3.307242 GCTACAATTACAGCAACTCCGAG 59.693 47.826 5.75 0.00 37.73 4.63
3437 3942 3.259064 GCTACAATTACAGCAACTCCGA 58.741 45.455 5.75 0.00 37.73 4.55
3438 3943 2.029244 CGCTACAATTACAGCAACTCCG 59.971 50.000 10.19 0.00 37.66 4.63
3439 3944 3.259064 TCGCTACAATTACAGCAACTCC 58.741 45.455 10.19 0.00 37.66 3.85
3440 3945 3.307242 CCTCGCTACAATTACAGCAACTC 59.693 47.826 10.19 0.00 37.66 3.01
3441 3946 3.262420 CCTCGCTACAATTACAGCAACT 58.738 45.455 10.19 0.00 37.66 3.16
3442 3947 2.223044 GCCTCGCTACAATTACAGCAAC 60.223 50.000 10.19 0.00 37.66 4.17
3443 3948 2.006888 GCCTCGCTACAATTACAGCAA 58.993 47.619 10.19 0.00 37.66 3.91
3444 3949 1.207089 AGCCTCGCTACAATTACAGCA 59.793 47.619 10.19 0.00 36.99 4.41
3445 3950 1.941325 AGCCTCGCTACAATTACAGC 58.059 50.000 1.25 1.25 36.99 4.40
3446 3951 3.430218 GCATAGCCTCGCTACAATTACAG 59.570 47.826 0.00 0.00 44.24 2.74
3447 3952 3.390135 GCATAGCCTCGCTACAATTACA 58.610 45.455 0.00 0.00 44.24 2.41
3448 3953 2.737252 GGCATAGCCTCGCTACAATTAC 59.263 50.000 0.00 0.00 46.69 1.89
3449 3954 3.040147 GGCATAGCCTCGCTACAATTA 57.960 47.619 0.00 0.00 46.69 1.40
3450 3955 1.884235 GGCATAGCCTCGCTACAATT 58.116 50.000 0.00 0.00 46.69 2.32
3451 3956 3.614399 GGCATAGCCTCGCTACAAT 57.386 52.632 0.00 0.00 46.69 2.71
3466 3971 3.134792 AAACACGTGGTTGCGGCA 61.135 55.556 20.01 0.00 40.35 5.69
3467 3972 2.400896 ATCAAACACGTGGTTGCGGC 62.401 55.000 35.82 0.00 42.24 6.53
3470 3975 1.857837 CCAAATCAAACACGTGGTTGC 59.142 47.619 35.82 0.00 42.24 4.17
3471 3976 2.159170 ACCCAAATCAAACACGTGGTTG 60.159 45.455 35.12 35.12 43.79 3.77
3472 3977 2.104170 ACCCAAATCAAACACGTGGTT 58.896 42.857 21.57 18.20 42.98 3.67
3478 3983 3.989817 GCTCATCAACCCAAATCAAACAC 59.010 43.478 0.00 0.00 0.00 3.32
3479 3984 3.006752 GGCTCATCAACCCAAATCAAACA 59.993 43.478 0.00 0.00 0.00 2.83
3480 3985 3.259123 AGGCTCATCAACCCAAATCAAAC 59.741 43.478 0.00 0.00 0.00 2.93
3481 3986 3.509442 AGGCTCATCAACCCAAATCAAA 58.491 40.909 0.00 0.00 0.00 2.69
3482 3987 3.091545 GAGGCTCATCAACCCAAATCAA 58.908 45.455 10.25 0.00 0.00 2.57
3483 3988 2.309755 AGAGGCTCATCAACCCAAATCA 59.690 45.455 18.26 0.00 0.00 2.57
3485 3990 3.094572 CAAGAGGCTCATCAACCCAAAT 58.905 45.455 18.26 0.00 0.00 2.32
3486 3991 2.108075 TCAAGAGGCTCATCAACCCAAA 59.892 45.455 18.26 0.00 0.00 3.28
3487 3992 1.704628 TCAAGAGGCTCATCAACCCAA 59.295 47.619 18.26 0.00 0.00 4.12
3488 3993 1.280133 CTCAAGAGGCTCATCAACCCA 59.720 52.381 18.26 0.00 0.00 4.51
3490 3995 2.777832 ACTCAAGAGGCTCATCAACC 57.222 50.000 18.26 0.00 0.00 3.77
3492 3997 9.113838 GATAATAAAACTCAAGAGGCTCATCAA 57.886 33.333 18.26 0.00 0.00 2.57
3493 3998 8.489489 AGATAATAAAACTCAAGAGGCTCATCA 58.511 33.333 18.26 0.00 0.00 3.07
3494 3999 8.900983 AGATAATAAAACTCAAGAGGCTCATC 57.099 34.615 18.26 5.94 0.00 2.92
3496 4001 9.823647 CTAAGATAATAAAACTCAAGAGGCTCA 57.176 33.333 18.26 0.00 0.00 4.26
3498 4003 9.825109 GACTAAGATAATAAAACTCAAGAGGCT 57.175 33.333 1.73 0.00 0.00 4.58
3499 4004 9.825109 AGACTAAGATAATAAAACTCAAGAGGC 57.175 33.333 1.73 0.00 0.00 4.70
3515 4020 9.961264 AGATAACGGATACATCAGACTAAGATA 57.039 33.333 0.00 0.00 0.00 1.98
3517 4022 7.937394 TCAGATAACGGATACATCAGACTAAGA 59.063 37.037 0.00 0.00 0.00 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.