Multiple sequence alignment - TraesCS5D01G516000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G516000 chr5D 100.000 8842 0 0 1 8842 538774195 538783036 0.000000e+00 16329.0
1 TraesCS5D01G516000 chr4A 91.991 2697 132 25 5667 8318 629869630 629866973 0.000000e+00 3707.0
2 TraesCS5D01G516000 chr4A 94.764 2368 85 14 3320 5670 629872097 629869752 0.000000e+00 3650.0
3 TraesCS5D01G516000 chr4A 94.396 2391 87 16 949 3320 629874523 629872161 0.000000e+00 3629.0
4 TraesCS5D01G516000 chr4A 88.584 657 49 8 54 708 629900668 629900036 0.000000e+00 774.0
5 TraesCS5D01G516000 chr4A 95.918 196 5 3 701 894 629874721 629874527 1.850000e-81 315.0
6 TraesCS5D01G516000 chr4A 100.000 59 0 0 1 59 629909572 629909514 9.390000e-20 110.0
7 TraesCS5D01G516000 chr5B 94.161 2449 95 21 912 3327 680345739 680348172 0.000000e+00 3687.0
8 TraesCS5D01G516000 chr5B 91.560 2429 117 30 6010 8416 680350749 680353111 0.000000e+00 3269.0
9 TraesCS5D01G516000 chr5B 91.441 1332 69 22 3475 4799 680348164 680349457 0.000000e+00 1786.0
10 TraesCS5D01G516000 chr5B 95.070 791 28 11 4913 5699 680349459 680350242 0.000000e+00 1234.0
11 TraesCS5D01G516000 chr5B 85.100 651 84 7 1 641 680344759 680345406 0.000000e+00 652.0
12 TraesCS5D01G516000 chr5B 93.796 274 14 1 5701 5974 680350402 680350672 8.260000e-110 409.0
13 TraesCS5D01G516000 chr5B 91.200 125 8 2 768 892 680345631 680345752 5.490000e-37 167.0
14 TraesCS5D01G516000 chr3D 88.333 60 7 0 8104 8163 114676116 114676175 1.230000e-08 73.1
15 TraesCS5D01G516000 chr7D 91.837 49 2 2 8120 8167 18966037 18965990 5.730000e-07 67.6
16 TraesCS5D01G516000 chr1D 91.837 49 2 2 8120 8167 146094743 146094790 5.730000e-07 67.6
17 TraesCS5D01G516000 chr1D 91.837 49 2 2 8120 8167 156550050 156550097 5.730000e-07 67.6
18 TraesCS5D01G516000 chr1A 86.885 61 6 2 8104 8163 399497040 399496981 5.730000e-07 67.6
19 TraesCS5D01G516000 chr7A 93.333 45 2 1 8120 8163 19509097 19509053 2.060000e-06 65.8
20 TraesCS5D01G516000 chr2B 85.714 63 6 3 8103 8163 514346420 514346481 7.410000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G516000 chr5D 538774195 538783036 8841 False 16329.000000 16329 100.000000 1 8842 1 chr5D.!!$F1 8841
1 TraesCS5D01G516000 chr4A 629866973 629874721 7748 True 2825.250000 3707 94.267250 701 8318 4 chr4A.!!$R3 7617
2 TraesCS5D01G516000 chr4A 629900036 629900668 632 True 774.000000 774 88.584000 54 708 1 chr4A.!!$R1 654
3 TraesCS5D01G516000 chr5B 680344759 680353111 8352 False 1600.571429 3687 91.761143 1 8416 7 chr5B.!!$F1 8415

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
898 1032 0.036306 GAAGGGGAACGAAGGCTTCA 59.964 55.0 25.66 0.00 0.00 3.02 F
1098 1241 0.317103 CTCGCAGGTAACCGATCTCG 60.317 60.0 0.00 0.00 39.44 4.04 F
1942 2098 0.320683 CGTGCCTCATCACCTGTGAA 60.321 55.0 3.79 0.00 43.58 3.18 F
2788 2954 0.993532 TTATGTAACTGTTCCGCGCG 59.006 50.0 25.67 25.67 0.00 6.86 F
3173 3347 0.607489 GCAAGATCCAGTGGTGTGCT 60.607 55.0 9.54 0.00 0.00 4.40 F
4824 5069 0.459237 GTGTCCACTCCAGATCTGCG 60.459 60.0 17.76 12.33 0.00 5.18 F
4828 5073 0.738762 CCACTCCAGATCTGCGTGTG 60.739 60.0 27.38 25.89 32.38 3.82 F
5926 6469 0.181114 GGCACCTGCATCCAGTGATA 59.819 55.0 9.67 0.00 44.36 2.15 F
6505 7097 0.613777 AAGCGGGACTTGGTTCCTAG 59.386 55.0 0.00 0.00 37.17 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2773 2939 0.024619 GAATCGCGCGGAACAGTTAC 59.975 55.000 31.69 7.58 0.00 2.50 R
2807 2973 2.551270 AGTCTGATACCCAGCAGGAAA 58.449 47.619 0.00 0.00 42.62 3.13 R
3167 3341 0.249031 GTGGAACCAAAGCAGCACAC 60.249 55.000 0.00 0.00 0.00 3.82 R
3720 3959 1.137675 CATCGTGCAGAGGGAGATTGA 59.862 52.381 0.00 0.00 0.00 2.57 R
4891 5136 0.693049 AGAAACAGGCCAATCCGTCT 59.307 50.000 5.01 0.00 40.77 4.18 R
5889 6432 0.105039 CCGGGGGAGAAATCTCTTCG 59.895 60.000 10.09 10.59 42.48 3.79 R
6124 6708 0.690762 ATGTGTGGACGCTAAGGGTT 59.309 50.000 0.00 0.00 0.00 4.11 R
7463 8061 0.244450 CCCGTACAGCCGTACTCAAA 59.756 55.000 8.54 0.00 44.97 2.69 R
8424 9032 0.464036 TGAGCTTCAGACGTTGTGGT 59.536 50.000 0.00 0.00 0.00 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 7.039882 CCAACTAACACCTAAGTATGTCGAAT 58.960 38.462 0.00 0.00 0.00 3.34
69 70 9.577110 CAACTAACACCTAAGTATGTCGAATAA 57.423 33.333 0.00 0.00 0.00 1.40
77 78 9.367444 ACCTAAGTATGTCGAATAAAACTTCAG 57.633 33.333 0.00 0.00 0.00 3.02
93 94 5.588958 ACTTCAGATGAGATGAACGATGA 57.411 39.130 0.00 0.00 33.28 2.92
105 106 9.435688 TGAGATGAACGATGAGAGAAAATTAAA 57.564 29.630 0.00 0.00 0.00 1.52
183 184 4.657013 TCACACCAGGCATATTAAACACA 58.343 39.130 0.00 0.00 0.00 3.72
186 187 6.210385 TCACACCAGGCATATTAAACACATTT 59.790 34.615 0.00 0.00 0.00 2.32
224 229 4.492791 TCTCGTTGAGTGTGACGATTTA 57.507 40.909 0.00 0.00 45.88 1.40
257 262 1.018752 CGTGAATCATGGACCGCACA 61.019 55.000 0.00 0.00 0.00 4.57
280 285 6.016276 ACATCCTTGCTTTTCGAAATGTTAGT 60.016 34.615 20.84 10.21 0.00 2.24
322 327 7.575365 TGCATGTCGTATTTGATTACATCATC 58.425 34.615 0.00 0.00 39.39 2.92
462 469 5.479306 TGCACGAAGTAGAATTTTCTAGCT 58.521 37.500 0.29 0.00 41.61 3.32
463 470 5.932303 TGCACGAAGTAGAATTTTCTAGCTT 59.068 36.000 0.00 7.33 41.61 3.74
464 471 7.094631 TGCACGAAGTAGAATTTTCTAGCTTA 58.905 34.615 0.00 0.00 41.61 3.09
465 472 7.601130 TGCACGAAGTAGAATTTTCTAGCTTAA 59.399 33.333 0.00 0.00 41.61 1.85
499 513 5.629079 ACTTCTTTGAAATAAAGAGGCCG 57.371 39.130 10.28 1.97 37.00 6.13
511 525 0.620556 AGAGGCCGTCCATGATTTGT 59.379 50.000 0.00 0.00 33.74 2.83
521 535 5.590259 CCGTCCATGATTTGTCTCCTTAATT 59.410 40.000 0.00 0.00 0.00 1.40
554 568 2.472029 ACCTATGATCGATCATCCCCC 58.528 52.381 37.33 7.59 43.72 5.40
560 574 3.520696 TGATCGATCATCCCCCACTATT 58.479 45.455 23.99 0.00 0.00 1.73
562 576 2.970987 TCGATCATCCCCCACTATTCA 58.029 47.619 0.00 0.00 0.00 2.57
565 579 4.165180 TCGATCATCCCCCACTATTCAAAA 59.835 41.667 0.00 0.00 0.00 2.44
590 604 1.271108 ACACGGTAATCATGCACACCA 60.271 47.619 0.00 0.00 0.00 4.17
634 648 7.890127 TCATTCCTTCAACTTCAATATTGTCCT 59.110 33.333 14.97 0.00 0.00 3.85
646 660 0.323451 ATTGTCCTCCCTTTTCGCCC 60.323 55.000 0.00 0.00 0.00 6.13
651 665 1.302192 CTCCCTTTTCGCCCGTTGA 60.302 57.895 0.00 0.00 0.00 3.18
687 701 8.347004 TGGCACATTTTAGATCACTTGAAATA 57.653 30.769 0.00 0.00 0.00 1.40
718 732 3.256879 TCGATACATCAGCCTCCATCTTC 59.743 47.826 0.00 0.00 0.00 2.87
724 738 1.385206 AGCCTCCATCTTCTCCCCC 60.385 63.158 0.00 0.00 0.00 5.40
894 1028 0.673956 GTCAGAAGGGGAACGAAGGC 60.674 60.000 0.00 0.00 0.00 4.35
895 1029 0.836400 TCAGAAGGGGAACGAAGGCT 60.836 55.000 0.00 0.00 0.00 4.58
897 1031 0.325272 AGAAGGGGAACGAAGGCTTC 59.675 55.000 17.33 17.33 0.00 3.86
898 1032 0.036306 GAAGGGGAACGAAGGCTTCA 59.964 55.000 25.66 0.00 0.00 3.02
899 1033 0.476771 AAGGGGAACGAAGGCTTCAA 59.523 50.000 25.66 0.00 0.00 2.69
900 1034 0.476771 AGGGGAACGAAGGCTTCAAA 59.523 50.000 25.66 0.00 0.00 2.69
901 1035 1.133606 AGGGGAACGAAGGCTTCAAAA 60.134 47.619 25.66 0.00 0.00 2.44
902 1036 1.684450 GGGGAACGAAGGCTTCAAAAA 59.316 47.619 25.66 0.00 0.00 1.94
1096 1239 1.392710 CCCTCGCAGGTAACCGATCT 61.393 60.000 0.00 0.00 31.93 2.75
1098 1241 0.317103 CTCGCAGGTAACCGATCTCG 60.317 60.000 0.00 0.00 39.44 4.04
1142 1285 3.299190 CTCGCTCCCCCGATCCTC 61.299 72.222 0.00 0.00 36.54 3.71
1168 1311 3.353836 GAAAACTGAGCCGGCGCA 61.354 61.111 31.27 31.27 37.52 6.09
1588 1744 4.759782 TCTGTCTATTAGAGTTTGCAGCC 58.240 43.478 0.00 0.00 0.00 4.85
1677 1833 1.449070 GGTAAAGCCCTCCGTTCCG 60.449 63.158 0.00 0.00 0.00 4.30
1719 1875 4.261405 CCCTGTTATGCTCGTTTTGTTTCA 60.261 41.667 0.00 0.00 0.00 2.69
1742 1898 0.535335 TGTACCAGGGATTCAGCGAC 59.465 55.000 0.00 0.00 0.00 5.19
1744 1900 0.616395 TACCAGGGATTCAGCGACCA 60.616 55.000 0.00 0.00 0.00 4.02
1756 1912 0.528470 AGCGACCACTAAGCACTCTC 59.472 55.000 0.00 0.00 0.00 3.20
1763 1919 5.665459 GACCACTAAGCACTCTCAATATGT 58.335 41.667 0.00 0.00 0.00 2.29
1770 1926 3.119291 GCACTCTCAATATGTCTCGGTG 58.881 50.000 0.00 0.00 0.00 4.94
1779 1935 5.122239 TCAATATGTCTCGGTGCTTCTTTTG 59.878 40.000 0.00 0.00 0.00 2.44
1780 1936 0.944386 TGTCTCGGTGCTTCTTTTGC 59.056 50.000 0.00 0.00 0.00 3.68
1889 2045 8.695456 AGGAAACAGAAAAATTGTCATGTAAGT 58.305 29.630 0.00 0.00 0.00 2.24
1907 2063 5.472137 TGTAAGTGATTTGTTCCCTACAAGC 59.528 40.000 0.00 0.00 46.81 4.01
1909 2065 4.729868 AGTGATTTGTTCCCTACAAGCTT 58.270 39.130 0.00 0.00 46.81 3.74
1911 2067 4.518970 GTGATTTGTTCCCTACAAGCTTCA 59.481 41.667 0.00 0.00 46.81 3.02
1914 2070 1.073284 TGTTCCCTACAAGCTTCACCC 59.927 52.381 0.00 0.00 32.64 4.61
1915 2071 1.073284 GTTCCCTACAAGCTTCACCCA 59.927 52.381 0.00 0.00 0.00 4.51
1916 2072 1.668826 TCCCTACAAGCTTCACCCAT 58.331 50.000 0.00 0.00 0.00 4.00
1919 2075 2.092212 CCCTACAAGCTTCACCCATCAT 60.092 50.000 0.00 0.00 0.00 2.45
1922 2078 4.576463 CCTACAAGCTTCACCCATCATTAC 59.424 45.833 0.00 0.00 0.00 1.89
1923 2079 3.356290 ACAAGCTTCACCCATCATTACC 58.644 45.455 0.00 0.00 0.00 2.85
1924 2080 2.332063 AGCTTCACCCATCATTACCG 57.668 50.000 0.00 0.00 0.00 4.02
1925 2081 1.559682 AGCTTCACCCATCATTACCGT 59.440 47.619 0.00 0.00 0.00 4.83
1926 2082 1.670811 GCTTCACCCATCATTACCGTG 59.329 52.381 0.00 0.00 0.00 4.94
1927 2083 1.670811 CTTCACCCATCATTACCGTGC 59.329 52.381 0.00 0.00 0.00 5.34
1942 2098 0.320683 CGTGCCTCATCACCTGTGAA 60.321 55.000 3.79 0.00 43.58 3.18
1950 2106 5.678583 CCTCATCACCTGTGAATAAGATGT 58.321 41.667 3.79 0.00 43.58 3.06
2358 2515 3.040147 TGCAACAAGCCAGTAGTACTC 57.960 47.619 0.00 0.00 44.83 2.59
2406 2571 3.492102 AAGCTGGCTGACACTAGAAAA 57.508 42.857 0.00 0.00 0.00 2.29
2539 2705 5.656859 GCCAGTATCAACCCCTTTTTCTAAT 59.343 40.000 0.00 0.00 0.00 1.73
2788 2954 0.993532 TTATGTAACTGTTCCGCGCG 59.006 50.000 25.67 25.67 0.00 6.86
2807 2973 2.351726 GCGATTCGATTTGCTTGTAGGT 59.648 45.455 10.88 0.00 0.00 3.08
2870 3036 5.255687 AGTGCACTGACAATTTGGATGATA 58.744 37.500 20.97 0.00 0.00 2.15
2886 3052 8.607441 TTGGATGATATAGTGAGTTGCATAAC 57.393 34.615 0.00 0.00 37.06 1.89
2986 3152 4.772886 TCTCTGGGCTTTAAAGGGTATC 57.227 45.455 16.78 0.00 0.00 2.24
3105 3271 9.352191 ACTTAGAACTTCTTGTCTAGACAGTTA 57.648 33.333 23.97 10.32 42.94 2.24
3106 3272 9.834628 CTTAGAACTTCTTGTCTAGACAGTTAG 57.165 37.037 23.97 21.60 42.94 2.34
3144 3315 1.137086 CGACATTTCCTGGTCCGATCT 59.863 52.381 0.00 0.00 0.00 2.75
3167 3341 2.486191 GGTAGGATGCAAGATCCAGTGG 60.486 54.545 1.40 1.40 40.61 4.00
3168 3342 1.293062 AGGATGCAAGATCCAGTGGT 58.707 50.000 9.54 0.00 40.61 4.16
3169 3343 1.064906 AGGATGCAAGATCCAGTGGTG 60.065 52.381 9.54 0.55 40.61 4.17
3173 3347 0.607489 GCAAGATCCAGTGGTGTGCT 60.607 55.000 9.54 0.00 0.00 4.40
3174 3348 1.162698 CAAGATCCAGTGGTGTGCTG 58.837 55.000 9.54 0.00 0.00 4.41
3296 3470 4.280929 TCATGATCGGTGGAGGTTACATAG 59.719 45.833 0.00 0.00 0.00 2.23
3368 3606 9.725019 TGTATTGTATTCACATCTTCTTTGTCT 57.275 29.630 0.00 0.00 33.76 3.41
3416 3654 3.011032 AGGAAATGGAGTTTGAGATGGCT 59.989 43.478 0.00 0.00 0.00 4.75
3462 3700 1.925455 CACTGAGGGATGTGGGGGT 60.925 63.158 0.00 0.00 0.00 4.95
3468 3706 2.238701 GGGATGTGGGGGTTCACCT 61.239 63.158 0.00 0.00 40.03 4.00
3540 3778 2.309136 AGCCCTTTTGCAGTGGTTAT 57.691 45.000 0.00 0.00 0.00 1.89
3720 3959 2.558359 GACACAATTAAAGCTGCCAGGT 59.442 45.455 0.00 0.00 0.00 4.00
3744 3983 2.821366 CCCTCTGCACGATGTGGC 60.821 66.667 0.00 0.00 33.64 5.01
3844 4084 4.753233 ACAGCTGATATCTCTGTTGTGTC 58.247 43.478 23.35 0.00 41.14 3.67
3958 4198 4.835678 TCATGTCAAGCTTCTATTCAGCA 58.164 39.130 0.00 0.00 39.99 4.41
4011 4251 0.604511 CCCTCGGGCGTACTTTTGTT 60.605 55.000 0.00 0.00 0.00 2.83
4017 4257 2.350498 CGGGCGTACTTTTGTTGGATAG 59.650 50.000 0.00 0.00 0.00 2.08
4097 4337 8.982723 AGTATCCACTTAGATATGAGTTTGTGT 58.017 33.333 0.00 0.00 31.59 3.72
4098 4338 9.035607 GTATCCACTTAGATATGAGTTTGTGTG 57.964 37.037 0.00 0.00 31.59 3.82
4159 4400 4.277423 TGAAACAAGGCTTAGCTACCAAAC 59.723 41.667 3.59 0.00 0.00 2.93
4161 4402 2.375509 ACAAGGCTTAGCTACCAAACCT 59.624 45.455 3.59 0.00 0.00 3.50
4258 4499 5.961272 TCTTGGAACCTGAAACAAAAAGTC 58.039 37.500 0.00 0.00 0.00 3.01
4260 4501 6.887545 TCTTGGAACCTGAAACAAAAAGTCTA 59.112 34.615 0.00 0.00 0.00 2.59
4347 4588 3.498927 TCTCGTCCAGTTTCGGTTATC 57.501 47.619 0.00 0.00 0.00 1.75
4349 4590 1.205417 TCGTCCAGTTTCGGTTATCCC 59.795 52.381 0.00 0.00 0.00 3.85
4422 4663 0.539438 TTGGTGGACATGGAACTGGC 60.539 55.000 0.00 0.00 0.00 4.85
4520 4765 1.228831 TGCACATCCACTTTGGGGG 60.229 57.895 0.00 0.00 38.32 5.40
4541 4786 3.259064 GCATTGAGCATGAGTTTGCATT 58.741 40.909 0.00 0.00 45.23 3.56
4568 4813 3.961477 TCAACTGAACACACCAAATCG 57.039 42.857 0.00 0.00 0.00 3.34
4670 4915 4.801330 AATTAACCAGCTTAGCCCAAAC 57.199 40.909 0.00 0.00 0.00 2.93
4671 4916 2.209690 TAACCAGCTTAGCCCAAACC 57.790 50.000 0.00 0.00 0.00 3.27
4672 4917 0.541998 AACCAGCTTAGCCCAAACCC 60.542 55.000 0.00 0.00 0.00 4.11
4673 4918 1.076549 CCAGCTTAGCCCAAACCCA 59.923 57.895 0.00 0.00 0.00 4.51
4674 4919 0.541764 CCAGCTTAGCCCAAACCCAA 60.542 55.000 0.00 0.00 0.00 4.12
4675 4920 1.337118 CAGCTTAGCCCAAACCCAAA 58.663 50.000 0.00 0.00 0.00 3.28
4761 5006 1.073964 CGTCCACTCATTCTGCACAG 58.926 55.000 0.00 0.00 0.00 3.66
4824 5069 0.459237 GTGTCCACTCCAGATCTGCG 60.459 60.000 17.76 12.33 0.00 5.18
4828 5073 0.738762 CCACTCCAGATCTGCGTGTG 60.739 60.000 27.38 25.89 32.38 3.82
4837 5082 0.953727 ATCTGCGTGTGTTTGTGCAT 59.046 45.000 0.00 0.00 36.64 3.96
4948 5193 6.905544 TGTACGTGTTAACAAACATCTTGA 57.094 33.333 10.51 0.00 34.86 3.02
5057 5302 7.561021 TTCGGCATTGTATCTATTTTTGCTA 57.439 32.000 0.00 0.00 0.00 3.49
5442 5701 9.567776 CTACTCCATCAGTATCATATAGGTAGG 57.432 40.741 0.00 0.00 36.96 3.18
5443 5702 7.945278 ACTCCATCAGTATCATATAGGTAGGT 58.055 38.462 0.00 0.00 31.37 3.08
5444 5703 7.836685 ACTCCATCAGTATCATATAGGTAGGTG 59.163 40.741 0.00 0.00 31.37 4.00
5445 5704 7.709601 TCCATCAGTATCATATAGGTAGGTGT 58.290 38.462 0.00 0.00 0.00 4.16
5446 5705 8.177456 TCCATCAGTATCATATAGGTAGGTGTT 58.823 37.037 0.00 0.00 0.00 3.32
5447 5706 8.253810 CCATCAGTATCATATAGGTAGGTGTTG 58.746 40.741 0.00 0.00 0.00 3.33
5575 5835 4.718276 ACATATGTTTCCCCTACTAACGGT 59.282 41.667 1.41 0.00 0.00 4.83
5655 5915 7.827729 GGTGGATAATGTTACCTACAAAGAACT 59.172 37.037 0.00 0.00 40.89 3.01
5685 6070 7.453393 TGCTTATACTTGCTAAGATAATGCCT 58.547 34.615 3.37 0.00 0.00 4.75
5686 6071 7.604164 TGCTTATACTTGCTAAGATAATGCCTC 59.396 37.037 3.37 0.00 0.00 4.70
5699 6084 7.336161 AGATAATGCCTCGACTATATGTACC 57.664 40.000 0.00 0.00 0.00 3.34
5713 6256 9.837525 GACTATATGTACCAGTTACCGATTAAG 57.162 37.037 0.00 0.00 0.00 1.85
5782 6325 5.401531 TCTACAGGACCAGTGAATTGTAC 57.598 43.478 0.00 0.00 0.00 2.90
5821 6364 5.391312 AAGATGAACATAACTTGGGTTGC 57.609 39.130 0.00 0.00 36.92 4.17
5822 6365 4.666512 AGATGAACATAACTTGGGTTGCT 58.333 39.130 0.00 0.00 36.92 3.91
5823 6366 5.815581 AGATGAACATAACTTGGGTTGCTA 58.184 37.500 0.00 0.00 36.92 3.49
5889 6432 9.051679 AGGCAAACCAAATTGTTTTAGTTAATC 57.948 29.630 0.00 0.00 36.33 1.75
5911 6454 1.153147 GAGATTTCTCCCCCGGCAC 60.153 63.158 0.00 0.00 37.02 5.01
5926 6469 0.181114 GGCACCTGCATCCAGTGATA 59.819 55.000 9.67 0.00 44.36 2.15
5995 6558 6.874288 ATAGACTTGGAATAAGATGCTTGC 57.126 37.500 0.00 0.00 0.00 4.01
6008 6571 0.685785 TGCTTGCAGGGTTTTGTGGA 60.686 50.000 0.00 0.00 0.00 4.02
6012 6596 1.040339 TGCAGGGTTTTGTGGACCAC 61.040 55.000 18.28 18.28 38.98 4.16
6048 6632 5.918608 ACTTGAGTTCTTACATGTGTCAGT 58.081 37.500 9.11 0.00 0.00 3.41
6054 6638 8.635328 TGAGTTCTTACATGTGTCAGTACTAAA 58.365 33.333 9.11 1.52 32.52 1.85
6096 6680 8.480643 AAATATGTAGAGCTGTTAGTGTTGAC 57.519 34.615 0.00 0.00 0.00 3.18
6124 6708 4.853468 TCTGCCAGTCAATACCCAATTA 57.147 40.909 0.00 0.00 0.00 1.40
6185 6769 5.762711 TGAATGGTGAGAAGAATTTTGTCGA 59.237 36.000 0.00 0.00 0.00 4.20
6234 6818 7.768120 GGAATTCATCTGACTCAGTTCAGTTAT 59.232 37.037 7.93 0.00 43.19 1.89
6293 6877 8.436778 TGGAAATTGCTAGAGCTTATGGTTATA 58.563 33.333 2.72 0.00 42.66 0.98
6294 6878 9.454859 GGAAATTGCTAGAGCTTATGGTTATAT 57.545 33.333 2.72 0.00 42.66 0.86
6296 6880 7.856145 ATTGCTAGAGCTTATGGTTATATGC 57.144 36.000 2.72 0.00 42.66 3.14
6297 6881 6.358974 TGCTAGAGCTTATGGTTATATGCA 57.641 37.500 2.72 0.00 40.52 3.96
6298 6882 6.950842 TGCTAGAGCTTATGGTTATATGCAT 58.049 36.000 3.79 3.79 40.52 3.96
6299 6883 8.078060 TGCTAGAGCTTATGGTTATATGCATA 57.922 34.615 9.27 9.27 40.52 3.14
6300 6884 8.539544 TGCTAGAGCTTATGGTTATATGCATAA 58.460 33.333 11.13 0.00 40.52 1.90
6301 6885 9.553064 GCTAGAGCTTATGGTTATATGCATAAT 57.447 33.333 11.13 1.73 40.52 1.28
6358 6942 5.596361 TGTTTCCTTTTCTGATTGTAGCCAA 59.404 36.000 0.00 0.00 34.45 4.52
6387 6971 6.690194 AGCTAGATATTTTCCTTTGCTGTG 57.310 37.500 0.00 0.00 0.00 3.66
6388 6972 6.183347 AGCTAGATATTTTCCTTTGCTGTGT 58.817 36.000 0.00 0.00 0.00 3.72
6410 7002 7.448777 TGTGTAAACTCTTCTGATCTACACTCT 59.551 37.037 13.80 0.00 36.99 3.24
6457 7049 5.921962 TCTCTGCTTCTATAAACTCTGCA 57.078 39.130 0.00 0.00 0.00 4.41
6465 7057 6.201806 GCTTCTATAAACTCTGCACGATTGAT 59.798 38.462 0.00 0.00 0.00 2.57
6504 7096 2.768046 AAGCGGGACTTGGTTCCTA 58.232 52.632 0.00 0.00 37.17 2.94
6505 7097 0.613777 AAGCGGGACTTGGTTCCTAG 59.386 55.000 0.00 0.00 37.17 3.02
6575 7167 5.048504 ACAGTCTGCATTGAAGGTATGTTTG 60.049 40.000 0.00 0.00 0.00 2.93
6622 7214 6.552008 TCTTTGTGGGGAGTAAAATGAGAAT 58.448 36.000 0.00 0.00 0.00 2.40
6809 7401 8.523523 TGACGAAATCAACGATAAAGAACTAA 57.476 30.769 0.00 0.00 33.02 2.24
7055 7647 6.323996 TGAGGGACTATCAACGTCTCATTATT 59.676 38.462 0.00 0.00 41.55 1.40
7087 7679 5.192927 TGTGTATGGTTTCATTCCTCCATC 58.807 41.667 0.00 0.00 40.54 3.51
7157 7749 8.788806 ACATAAAATCAAGAAACAATACGGTGA 58.211 29.630 0.00 0.00 0.00 4.02
7287 7879 4.446994 TGTCTTTTGCACACACAATGAA 57.553 36.364 0.00 0.00 0.00 2.57
7405 7997 9.420966 CTTAATTCAAAAGGAAAAGCGAAAAAC 57.579 29.630 0.00 0.00 39.39 2.43
7452 8046 6.971726 TTTTCAGTCAGACTAGTGGACTTA 57.028 37.500 19.26 12.05 39.75 2.24
7463 8061 6.440965 AGACTAGTGGACTTACTGGCTAAAAT 59.559 38.462 0.00 0.00 32.97 1.82
7511 8109 3.455910 AGCCATGGTCAGAGCTTGTTATA 59.544 43.478 14.67 0.00 29.27 0.98
7547 8145 7.438459 ACGATAGCACAGGAACTAATAATTGTC 59.562 37.037 0.00 0.00 36.34 3.18
7554 8152 9.003658 CACAGGAACTAATAATTGTCAAAGTCT 57.996 33.333 0.00 0.00 36.02 3.24
7581 8179 6.293626 GCCATGAGTATTTCGCATTGACTATT 60.294 38.462 0.00 0.00 34.50 1.73
7614 8214 4.272489 TCACTAAATGGATGCAGGGAAAG 58.728 43.478 0.00 0.00 0.00 2.62
7718 8319 3.067461 GCGACATCTACTCCTCATTGTCT 59.933 47.826 0.00 0.00 33.14 3.41
7721 8322 5.163612 CGACATCTACTCCTCATTGTCTGAA 60.164 44.000 0.00 0.00 33.14 3.02
7725 8326 3.996921 ACTCCTCATTGTCTGAAGCAT 57.003 42.857 0.00 0.00 32.14 3.79
7743 8344 4.338879 AGCATGCTCATTTACCAGTTTCT 58.661 39.130 16.30 0.00 0.00 2.52
7871 8473 3.492482 GCACACAACTATTTTGCCTGGTT 60.492 43.478 0.00 0.00 0.00 3.67
7877 8479 1.895131 CTATTTTGCCTGGTTGGTGCT 59.105 47.619 0.00 0.00 38.35 4.40
7913 8515 1.175654 TGTGCTACGACCATCGGTTA 58.824 50.000 2.97 0.00 45.59 2.85
7955 8557 3.082579 GCAGGGCGAGAAGGACGAT 62.083 63.158 0.00 0.00 0.00 3.73
7994 8597 1.898574 AGGGCAAGCAAACAGACCG 60.899 57.895 0.00 0.00 0.00 4.79
8047 8651 8.655970 GTTGTATTTGGGAAATGCATAGAAAAC 58.344 33.333 0.00 0.00 41.88 2.43
8172 8778 1.207089 TCCATGGAGCTACGGAACAAG 59.793 52.381 11.44 0.00 0.00 3.16
8186 8792 5.556915 ACGGAACAAGTTAATTCTCATCCA 58.443 37.500 0.00 0.00 0.00 3.41
8192 8798 6.725364 ACAAGTTAATTCTCATCCACCATCT 58.275 36.000 0.00 0.00 0.00 2.90
8224 8830 1.464023 GCGATCACATGTTTGTCACGG 60.464 52.381 0.00 0.00 32.34 4.94
8245 8851 3.432252 GGTGTTGGACAGAAGATACAACG 59.568 47.826 0.00 0.00 43.08 4.10
8254 8861 8.350722 TGGACAGAAGATACAACGATACTTATC 58.649 37.037 0.00 0.00 0.00 1.75
8306 8913 6.620877 AGTGTATTTTCTAGATCCACACCA 57.379 37.500 17.16 0.00 36.36 4.17
8337 8944 7.039313 ACTTGTAGGTTCAAAAACTTGGATC 57.961 36.000 0.00 0.00 35.61 3.36
8373 8981 2.762887 TGGTGAGGTTGCAAAATTGACA 59.237 40.909 0.00 0.00 0.00 3.58
8377 8985 5.048083 GGTGAGGTTGCAAAATTGACATCTA 60.048 40.000 0.00 0.00 0.00 1.98
8382 8990 8.986477 AGGTTGCAAAATTGACATCTATTTAC 57.014 30.769 0.00 0.36 32.56 2.01
8399 9007 5.633830 ATTTACAGCTCATTTGGTGACAG 57.366 39.130 0.00 0.00 44.54 3.51
8401 9009 2.498167 ACAGCTCATTTGGTGACAGTC 58.502 47.619 0.00 0.00 44.54 3.51
8416 9024 2.742589 GACAGTCGGGTCCAAAAGATTC 59.257 50.000 0.00 0.00 0.00 2.52
8417 9025 2.105821 ACAGTCGGGTCCAAAAGATTCA 59.894 45.455 0.00 0.00 0.00 2.57
8418 9026 3.244911 ACAGTCGGGTCCAAAAGATTCAT 60.245 43.478 0.00 0.00 0.00 2.57
8419 9027 3.127548 CAGTCGGGTCCAAAAGATTCATG 59.872 47.826 0.00 0.00 0.00 3.07
8420 9028 3.009033 AGTCGGGTCCAAAAGATTCATGA 59.991 43.478 0.00 0.00 0.00 3.07
8421 9029 3.947834 GTCGGGTCCAAAAGATTCATGAT 59.052 43.478 0.00 0.00 0.00 2.45
8422 9030 4.035675 GTCGGGTCCAAAAGATTCATGATC 59.964 45.833 0.00 0.00 34.83 2.92
8423 9031 3.316308 CGGGTCCAAAAGATTCATGATCC 59.684 47.826 0.00 0.00 35.21 3.36
8424 9032 4.280819 GGGTCCAAAAGATTCATGATCCA 58.719 43.478 0.00 0.00 35.21 3.41
8425 9033 4.098501 GGGTCCAAAAGATTCATGATCCAC 59.901 45.833 0.00 0.00 35.21 4.02
8426 9034 4.098501 GGTCCAAAAGATTCATGATCCACC 59.901 45.833 0.00 0.00 35.21 4.61
8427 9035 4.706476 GTCCAAAAGATTCATGATCCACCA 59.294 41.667 0.00 0.00 35.21 4.17
8428 9036 4.706476 TCCAAAAGATTCATGATCCACCAC 59.294 41.667 0.00 0.00 35.21 4.16
8429 9037 4.463539 CCAAAAGATTCATGATCCACCACA 59.536 41.667 0.00 0.00 35.21 4.17
8430 9038 5.047164 CCAAAAGATTCATGATCCACCACAA 60.047 40.000 0.00 0.00 35.21 3.33
8431 9039 5.649782 AAAGATTCATGATCCACCACAAC 57.350 39.130 0.00 0.00 35.21 3.32
8432 9040 3.273434 AGATTCATGATCCACCACAACG 58.727 45.455 0.00 0.00 35.21 4.10
8433 9041 2.559698 TTCATGATCCACCACAACGT 57.440 45.000 0.00 0.00 0.00 3.99
8434 9042 2.093306 TCATGATCCACCACAACGTC 57.907 50.000 0.00 0.00 0.00 4.34
8435 9043 1.623311 TCATGATCCACCACAACGTCT 59.377 47.619 0.00 0.00 0.00 4.18
8436 9044 1.733912 CATGATCCACCACAACGTCTG 59.266 52.381 0.00 0.00 0.00 3.51
8437 9045 1.044611 TGATCCACCACAACGTCTGA 58.955 50.000 0.00 0.00 0.00 3.27
8438 9046 1.414550 TGATCCACCACAACGTCTGAA 59.585 47.619 0.00 0.00 0.00 3.02
8439 9047 2.069273 GATCCACCACAACGTCTGAAG 58.931 52.381 0.00 0.00 0.00 3.02
8440 9048 0.531974 TCCACCACAACGTCTGAAGC 60.532 55.000 0.00 0.00 0.00 3.86
8441 9049 0.532862 CCACCACAACGTCTGAAGCT 60.533 55.000 0.00 0.00 0.00 3.74
8442 9050 0.861837 CACCACAACGTCTGAAGCTC 59.138 55.000 0.00 0.00 0.00 4.09
8443 9051 0.464036 ACCACAACGTCTGAAGCTCA 59.536 50.000 0.00 0.00 0.00 4.26
8444 9052 1.143305 CCACAACGTCTGAAGCTCAG 58.857 55.000 6.79 6.79 45.59 3.35
8445 9053 1.143305 CACAACGTCTGAAGCTCAGG 58.857 55.000 11.63 2.20 44.39 3.86
8446 9054 0.753262 ACAACGTCTGAAGCTCAGGT 59.247 50.000 11.63 2.69 44.39 4.00
8447 9055 1.269831 ACAACGTCTGAAGCTCAGGTC 60.270 52.381 11.63 0.00 44.39 3.85
8448 9056 1.040646 AACGTCTGAAGCTCAGGTCA 58.959 50.000 11.63 0.21 44.39 4.02
8449 9057 1.261480 ACGTCTGAAGCTCAGGTCAT 58.739 50.000 11.63 0.00 44.39 3.06
8450 9058 2.447443 ACGTCTGAAGCTCAGGTCATA 58.553 47.619 11.63 0.00 44.39 2.15
8451 9059 3.027412 ACGTCTGAAGCTCAGGTCATAT 58.973 45.455 11.63 0.00 44.39 1.78
8452 9060 3.449018 ACGTCTGAAGCTCAGGTCATATT 59.551 43.478 11.63 0.00 44.39 1.28
8453 9061 4.645136 ACGTCTGAAGCTCAGGTCATATTA 59.355 41.667 11.63 0.00 44.39 0.98
8454 9062 5.218885 CGTCTGAAGCTCAGGTCATATTAG 58.781 45.833 11.63 0.00 44.39 1.73
8455 9063 5.537188 GTCTGAAGCTCAGGTCATATTAGG 58.463 45.833 11.63 0.00 44.39 2.69
8456 9064 5.069781 GTCTGAAGCTCAGGTCATATTAGGT 59.930 44.000 11.63 0.00 44.39 3.08
8457 9065 5.663106 TCTGAAGCTCAGGTCATATTAGGTT 59.337 40.000 11.63 0.00 44.39 3.50
8458 9066 5.674525 TGAAGCTCAGGTCATATTAGGTTG 58.325 41.667 0.00 0.00 0.00 3.77
8459 9067 5.425217 TGAAGCTCAGGTCATATTAGGTTGA 59.575 40.000 0.00 0.00 0.00 3.18
8460 9068 6.100279 TGAAGCTCAGGTCATATTAGGTTGAT 59.900 38.462 0.00 0.00 0.00 2.57
8461 9069 5.862845 AGCTCAGGTCATATTAGGTTGATG 58.137 41.667 0.00 0.00 0.00 3.07
8462 9070 5.604231 AGCTCAGGTCATATTAGGTTGATGA 59.396 40.000 0.00 0.00 0.00 2.92
8463 9071 6.100279 AGCTCAGGTCATATTAGGTTGATGAA 59.900 38.462 0.00 0.00 31.62 2.57
8464 9072 6.426328 GCTCAGGTCATATTAGGTTGATGAAG 59.574 42.308 0.00 0.00 31.62 3.02
8465 9073 6.830912 TCAGGTCATATTAGGTTGATGAAGG 58.169 40.000 0.00 0.00 31.62 3.46
8466 9074 6.386927 TCAGGTCATATTAGGTTGATGAAGGT 59.613 38.462 0.00 0.00 31.62 3.50
8467 9075 7.056635 CAGGTCATATTAGGTTGATGAAGGTT 58.943 38.462 0.00 0.00 31.62 3.50
8468 9076 8.210946 CAGGTCATATTAGGTTGATGAAGGTTA 58.789 37.037 0.00 0.00 31.62 2.85
8469 9077 8.211629 AGGTCATATTAGGTTGATGAAGGTTAC 58.788 37.037 0.00 0.00 31.62 2.50
8470 9078 8.211629 GGTCATATTAGGTTGATGAAGGTTACT 58.788 37.037 0.00 0.00 31.62 2.24
8471 9079 9.262358 GTCATATTAGGTTGATGAAGGTTACTC 57.738 37.037 0.00 0.00 31.62 2.59
8472 9080 8.988060 TCATATTAGGTTGATGAAGGTTACTCA 58.012 33.333 0.00 0.00 0.00 3.41
8473 9081 9.613428 CATATTAGGTTGATGAAGGTTACTCAA 57.387 33.333 0.00 0.00 0.00 3.02
8475 9083 8.934023 ATTAGGTTGATGAAGGTTACTCAAAA 57.066 30.769 0.00 0.00 30.06 2.44
8476 9084 8.754991 TTAGGTTGATGAAGGTTACTCAAAAA 57.245 30.769 0.00 0.00 30.06 1.94
8501 9109 9.558396 AAAGAAAGTTGATGAATAAATTTGCCA 57.442 25.926 0.00 0.00 0.00 4.92
8502 9110 8.538409 AGAAAGTTGATGAATAAATTTGCCAC 57.462 30.769 0.00 0.00 0.00 5.01
8503 9111 8.149647 AGAAAGTTGATGAATAAATTTGCCACA 58.850 29.630 0.00 0.00 0.00 4.17
8504 9112 8.674263 AAAGTTGATGAATAAATTTGCCACAA 57.326 26.923 0.00 0.00 0.00 3.33
8505 9113 7.656707 AGTTGATGAATAAATTTGCCACAAC 57.343 32.000 0.00 9.51 35.62 3.32
8506 9114 7.444299 AGTTGATGAATAAATTTGCCACAACT 58.556 30.769 16.53 16.53 39.10 3.16
8507 9115 8.584157 AGTTGATGAATAAATTTGCCACAACTA 58.416 29.630 18.72 4.18 41.05 2.24
8508 9116 9.202273 GTTGATGAATAAATTTGCCACAACTAA 57.798 29.630 0.00 0.00 33.61 2.24
8509 9117 9.941325 TTGATGAATAAATTTGCCACAACTAAT 57.059 25.926 0.00 0.00 0.00 1.73
8510 9118 9.585099 TGATGAATAAATTTGCCACAACTAATC 57.415 29.630 0.00 0.00 0.00 1.75
8511 9119 9.807649 GATGAATAAATTTGCCACAACTAATCT 57.192 29.630 0.00 0.00 0.00 2.40
8514 9122 9.736023 GAATAAATTTGCCACAACTAATCTAGG 57.264 33.333 0.00 0.00 0.00 3.02
8515 9123 5.582689 AATTTGCCACAACTAATCTAGGC 57.417 39.130 0.00 0.00 42.32 3.93
8519 9127 4.357018 GCCACAACTAATCTAGGCAAAC 57.643 45.455 0.00 0.00 41.63 2.93
8520 9128 4.010349 GCCACAACTAATCTAGGCAAACT 58.990 43.478 0.00 0.00 41.63 2.66
8521 9129 4.142600 GCCACAACTAATCTAGGCAAACTG 60.143 45.833 0.00 0.00 41.63 3.16
8522 9130 5.003804 CCACAACTAATCTAGGCAAACTGT 58.996 41.667 0.00 0.00 0.00 3.55
8523 9131 5.106555 CCACAACTAATCTAGGCAAACTGTG 60.107 44.000 0.00 0.00 0.00 3.66
8524 9132 5.470098 CACAACTAATCTAGGCAAACTGTGT 59.530 40.000 0.00 0.00 0.00 3.72
8525 9133 6.017109 CACAACTAATCTAGGCAAACTGTGTT 60.017 38.462 0.00 0.00 0.00 3.32
8526 9134 6.546034 ACAACTAATCTAGGCAAACTGTGTTT 59.454 34.615 0.00 0.00 0.00 2.83
8527 9135 6.560253 ACTAATCTAGGCAAACTGTGTTTG 57.440 37.500 16.12 16.12 0.00 2.93
8531 9139 4.436515 GCAAACTGTGTTTGCCCC 57.563 55.556 27.65 9.28 46.51 5.80
8532 9140 1.227527 GCAAACTGTGTTTGCCCCC 60.228 57.895 27.65 9.00 46.51 5.40
8533 9141 1.965754 GCAAACTGTGTTTGCCCCCA 61.966 55.000 27.65 0.00 46.51 4.96
8534 9142 0.539051 CAAACTGTGTTTGCCCCCAA 59.461 50.000 9.73 0.00 0.00 4.12
8535 9143 1.065854 CAAACTGTGTTTGCCCCCAAA 60.066 47.619 9.73 0.00 38.56 3.28
8536 9144 1.280457 AACTGTGTTTGCCCCCAAAA 58.720 45.000 0.00 0.00 42.19 2.44
8537 9145 1.280457 ACTGTGTTTGCCCCCAAAAA 58.720 45.000 0.00 0.00 42.19 1.94
8538 9146 1.209261 ACTGTGTTTGCCCCCAAAAAG 59.791 47.619 0.00 0.00 42.19 2.27
8539 9147 1.209261 CTGTGTTTGCCCCCAAAAAGT 59.791 47.619 0.00 0.00 42.19 2.66
8540 9148 1.065854 TGTGTTTGCCCCCAAAAAGTG 60.066 47.619 0.00 0.00 42.19 3.16
8541 9149 0.107459 TGTTTGCCCCCAAAAAGTGC 60.107 50.000 0.00 0.00 42.19 4.40
8542 9150 1.144936 TTTGCCCCCAAAAAGTGCG 59.855 52.632 0.00 0.00 37.97 5.34
8543 9151 2.317149 TTTGCCCCCAAAAAGTGCGG 62.317 55.000 0.00 0.00 37.97 5.69
8544 9152 2.915137 GCCCCCAAAAAGTGCGGA 60.915 61.111 0.00 0.00 0.00 5.54
8545 9153 2.931068 GCCCCCAAAAAGTGCGGAG 61.931 63.158 0.00 0.00 0.00 4.63
8546 9154 1.228429 CCCCCAAAAAGTGCGGAGA 60.228 57.895 0.00 0.00 0.00 3.71
8547 9155 0.825840 CCCCCAAAAAGTGCGGAGAA 60.826 55.000 0.00 0.00 0.00 2.87
8548 9156 0.313987 CCCCAAAAAGTGCGGAGAAC 59.686 55.000 0.00 0.00 0.00 3.01
8549 9157 1.028905 CCCAAAAAGTGCGGAGAACA 58.971 50.000 0.00 0.00 0.00 3.18
8550 9158 1.407258 CCCAAAAAGTGCGGAGAACAA 59.593 47.619 0.00 0.00 0.00 2.83
8551 9159 2.159170 CCCAAAAAGTGCGGAGAACAAA 60.159 45.455 0.00 0.00 0.00 2.83
8552 9160 3.516615 CCAAAAAGTGCGGAGAACAAAA 58.483 40.909 0.00 0.00 0.00 2.44
8553 9161 3.305897 CCAAAAAGTGCGGAGAACAAAAC 59.694 43.478 0.00 0.00 0.00 2.43
8554 9162 2.468532 AAAGTGCGGAGAACAAAACG 57.531 45.000 0.00 0.00 0.00 3.60
8557 9165 2.254350 GCGGAGAACAAAACGCCC 59.746 61.111 0.00 0.00 45.70 6.13
8558 9166 2.554272 CGGAGAACAAAACGCCCG 59.446 61.111 0.00 0.00 0.00 6.13
8559 9167 2.254350 GGAGAACAAAACGCCCGC 59.746 61.111 0.00 0.00 0.00 6.13
8560 9168 2.254350 GAGAACAAAACGCCCGCC 59.746 61.111 0.00 0.00 0.00 6.13
8561 9169 2.517402 AGAACAAAACGCCCGCCA 60.517 55.556 0.00 0.00 0.00 5.69
8562 9170 2.354188 GAACAAAACGCCCGCCAC 60.354 61.111 0.00 0.00 0.00 5.01
8563 9171 3.127352 GAACAAAACGCCCGCCACA 62.127 57.895 0.00 0.00 0.00 4.17
8564 9172 2.615262 GAACAAAACGCCCGCCACAA 62.615 55.000 0.00 0.00 0.00 3.33
8565 9173 2.354539 CAAAACGCCCGCCACAAG 60.355 61.111 0.00 0.00 0.00 3.16
8566 9174 2.831284 AAAACGCCCGCCACAAGT 60.831 55.556 0.00 0.00 0.00 3.16
8567 9175 3.132481 AAAACGCCCGCCACAAGTG 62.132 57.895 0.00 0.00 0.00 3.16
8568 9176 4.868116 AACGCCCGCCACAAGTGT 62.868 61.111 0.00 0.00 0.00 3.55
8582 9190 4.045636 ACAAGTGTGACAAAGATTTGGC 57.954 40.909 9.91 7.21 46.42 4.52
8594 9202 7.628769 ACAAAGATTTGGCAAAAATTGAAGT 57.371 28.000 27.56 17.45 42.34 3.01
8595 9203 7.696755 ACAAAGATTTGGCAAAAATTGAAGTC 58.303 30.769 27.56 16.05 42.34 3.01
8596 9204 7.553760 ACAAAGATTTGGCAAAAATTGAAGTCT 59.446 29.630 27.56 17.56 42.34 3.24
8597 9205 8.400186 CAAAGATTTGGCAAAAATTGAAGTCTT 58.600 29.630 17.70 14.75 34.59 3.01
8598 9206 9.612066 AAAGATTTGGCAAAAATTGAAGTCTTA 57.388 25.926 17.70 0.00 29.51 2.10
8599 9207 9.783081 AAGATTTGGCAAAAATTGAAGTCTTAT 57.217 25.926 17.70 0.00 28.57 1.73
8600 9208 9.211485 AGATTTGGCAAAAATTGAAGTCTTATG 57.789 29.630 17.70 0.00 0.00 1.90
8601 9209 9.206870 GATTTGGCAAAAATTGAAGTCTTATGA 57.793 29.630 17.70 0.00 0.00 2.15
8602 9210 9.729281 ATTTGGCAAAAATTGAAGTCTTATGAT 57.271 25.926 17.70 0.00 0.00 2.45
8605 9213 9.859427 TGGCAAAAATTGAAGTCTTATGATAAG 57.141 29.630 5.86 5.86 0.00 1.73
8606 9214 9.860898 GGCAAAAATTGAAGTCTTATGATAAGT 57.139 29.630 11.62 0.00 0.00 2.24
8615 9223 9.809096 TGAAGTCTTATGATAAGTGACAGATTC 57.191 33.333 11.62 5.52 0.00 2.52
8616 9224 9.809096 GAAGTCTTATGATAAGTGACAGATTCA 57.191 33.333 11.62 0.00 0.00 2.57
8617 9225 9.814899 AAGTCTTATGATAAGTGACAGATTCAG 57.185 33.333 11.62 0.00 33.71 3.02
8618 9226 8.420222 AGTCTTATGATAAGTGACAGATTCAGG 58.580 37.037 11.62 0.00 33.71 3.86
8619 9227 8.417106 GTCTTATGATAAGTGACAGATTCAGGA 58.583 37.037 11.62 0.00 33.71 3.86
8620 9228 9.152327 TCTTATGATAAGTGACAGATTCAGGAT 57.848 33.333 11.62 0.00 33.71 3.24
8621 9229 9.775854 CTTATGATAAGTGACAGATTCAGGATT 57.224 33.333 4.05 0.00 33.71 3.01
8623 9231 7.854557 TGATAAGTGACAGATTCAGGATTTG 57.145 36.000 0.00 0.00 33.71 2.32
8624 9232 7.623630 TGATAAGTGACAGATTCAGGATTTGA 58.376 34.615 0.00 0.00 33.71 2.69
8625 9233 7.767659 TGATAAGTGACAGATTCAGGATTTGAG 59.232 37.037 0.00 0.00 37.07 3.02
8626 9234 4.260170 AGTGACAGATTCAGGATTTGAGC 58.740 43.478 0.00 0.00 37.07 4.26
8627 9235 4.005650 GTGACAGATTCAGGATTTGAGCA 58.994 43.478 0.00 0.00 37.07 4.26
8628 9236 4.639310 GTGACAGATTCAGGATTTGAGCAT 59.361 41.667 0.00 0.00 37.07 3.79
8629 9237 4.638865 TGACAGATTCAGGATTTGAGCATG 59.361 41.667 0.00 0.00 37.07 4.06
8630 9238 3.952323 ACAGATTCAGGATTTGAGCATGG 59.048 43.478 0.00 0.00 37.07 3.66
8631 9239 2.957006 AGATTCAGGATTTGAGCATGGC 59.043 45.455 0.00 0.00 37.07 4.40
8632 9240 1.477553 TTCAGGATTTGAGCATGGCC 58.522 50.000 0.00 0.00 37.07 5.36
8633 9241 0.332293 TCAGGATTTGAGCATGGCCA 59.668 50.000 8.56 8.56 0.00 5.36
8634 9242 0.744874 CAGGATTTGAGCATGGCCAG 59.255 55.000 13.05 4.54 0.00 4.85
8635 9243 0.627451 AGGATTTGAGCATGGCCAGA 59.373 50.000 13.05 0.00 0.00 3.86
8636 9244 1.030457 GGATTTGAGCATGGCCAGAG 58.970 55.000 13.05 7.72 0.00 3.35
8637 9245 0.384669 GATTTGAGCATGGCCAGAGC 59.615 55.000 21.88 21.88 38.76 4.09
8638 9246 0.033405 ATTTGAGCATGGCCAGAGCT 60.033 50.000 29.49 29.49 42.17 4.09
8639 9247 0.620030 TTTGAGCATGGCCAGAGCTA 59.380 50.000 29.24 16.13 39.02 3.32
8640 9248 0.620030 TTGAGCATGGCCAGAGCTAA 59.380 50.000 29.24 22.21 39.02 3.09
8641 9249 0.620030 TGAGCATGGCCAGAGCTAAA 59.380 50.000 29.24 19.93 39.02 1.85
8642 9250 1.020437 GAGCATGGCCAGAGCTAAAC 58.980 55.000 29.24 16.85 39.02 2.01
8643 9251 0.622665 AGCATGGCCAGAGCTAAACT 59.377 50.000 28.41 9.31 39.73 2.66
8644 9252 1.020437 GCATGGCCAGAGCTAAACTC 58.980 55.000 22.05 0.00 46.66 3.01
8658 9266 6.502136 AGCTAAACTCTAATGACCAAAAGC 57.498 37.500 0.00 0.00 0.00 3.51
8659 9267 6.003950 AGCTAAACTCTAATGACCAAAAGCA 58.996 36.000 0.00 0.00 0.00 3.91
8660 9268 6.660949 AGCTAAACTCTAATGACCAAAAGCAT 59.339 34.615 0.00 0.00 0.00 3.79
8661 9269 7.177392 AGCTAAACTCTAATGACCAAAAGCATT 59.823 33.333 0.00 0.00 38.24 3.56
8662 9270 7.814587 GCTAAACTCTAATGACCAAAAGCATTT 59.185 33.333 0.00 0.00 42.41 2.32
8663 9271 7.951530 AAACTCTAATGACCAAAAGCATTTG 57.048 32.000 7.43 7.43 44.50 2.32
8676 9284 7.581011 CAAAAGCATTTGGGTTTATACTCAC 57.419 36.000 6.51 0.00 45.93 3.51
8677 9285 5.914898 AAGCATTTGGGTTTATACTCACC 57.085 39.130 0.00 0.00 33.50 4.02
8678 9286 4.929479 AGCATTTGGGTTTATACTCACCA 58.071 39.130 0.00 0.00 33.50 4.17
8679 9287 5.518865 AGCATTTGGGTTTATACTCACCAT 58.481 37.500 0.00 0.00 33.50 3.55
8680 9288 6.668645 AGCATTTGGGTTTATACTCACCATA 58.331 36.000 0.00 0.00 33.50 2.74
8681 9289 7.122715 AGCATTTGGGTTTATACTCACCATAA 58.877 34.615 0.00 0.00 33.50 1.90
8682 9290 7.068226 AGCATTTGGGTTTATACTCACCATAAC 59.932 37.037 0.00 0.00 33.50 1.89
8683 9291 7.147983 GCATTTGGGTTTATACTCACCATAACA 60.148 37.037 0.00 0.00 33.50 2.41
8684 9292 8.912988 CATTTGGGTTTATACTCACCATAACAT 58.087 33.333 0.00 0.00 33.50 2.71
8687 9295 9.567776 TTGGGTTTATACTCACCATAACATATG 57.432 33.333 0.00 0.00 33.50 1.78
8688 9296 7.663905 TGGGTTTATACTCACCATAACATATGC 59.336 37.037 1.58 0.00 34.36 3.14
8689 9297 7.663905 GGGTTTATACTCACCATAACATATGCA 59.336 37.037 1.58 0.00 34.36 3.96
8690 9298 9.231297 GGTTTATACTCACCATAACATATGCAT 57.769 33.333 3.79 3.79 32.74 3.96
8697 9305 9.578576 ACTCACCATAACATATGCATCTATTTT 57.421 29.630 0.19 0.00 0.00 1.82
8723 9331 8.984482 TGAACATTGAAATTAATTGCAAAACG 57.016 26.923 22.58 16.50 38.71 3.60
8724 9332 7.585573 TGAACATTGAAATTAATTGCAAAACGC 59.414 29.630 22.58 14.04 38.71 4.84
8725 9333 7.188468 ACATTGAAATTAATTGCAAAACGCT 57.812 28.000 22.58 6.00 38.71 5.07
8726 9334 7.638134 ACATTGAAATTAATTGCAAAACGCTT 58.362 26.923 22.58 5.34 38.71 4.68
8727 9335 8.768955 ACATTGAAATTAATTGCAAAACGCTTA 58.231 25.926 22.58 1.04 38.71 3.09
8728 9336 9.591404 CATTGAAATTAATTGCAAAACGCTTAA 57.409 25.926 22.58 3.83 38.71 1.85
8729 9337 8.979817 TTGAAATTAATTGCAAAACGCTTAAC 57.020 26.923 17.69 0.00 43.06 2.01
8730 9338 8.131455 TGAAATTAATTGCAAAACGCTTAACA 57.869 26.923 6.38 0.00 43.06 2.41
8731 9339 8.768955 TGAAATTAATTGCAAAACGCTTAACAT 58.231 25.926 6.38 0.00 43.06 2.71
8732 9340 8.931905 AAATTAATTGCAAAACGCTTAACATG 57.068 26.923 1.71 0.00 43.06 3.21
8733 9341 4.388189 AATTGCAAAACGCTTAACATGC 57.612 36.364 1.71 0.00 43.06 4.06
8734 9342 2.498807 TGCAAAACGCTTAACATGCA 57.501 40.000 0.00 0.00 43.06 3.96
8735 9343 2.814269 TGCAAAACGCTTAACATGCAA 58.186 38.095 0.00 0.00 40.47 4.08
8736 9344 2.537625 TGCAAAACGCTTAACATGCAAC 59.462 40.909 0.00 0.00 40.47 4.17
8737 9345 2.537625 GCAAAACGCTTAACATGCAACA 59.462 40.909 0.00 0.00 37.77 3.33
8738 9346 3.000724 GCAAAACGCTTAACATGCAACAA 59.999 39.130 0.00 0.00 37.77 2.83
8739 9347 4.493220 GCAAAACGCTTAACATGCAACAAA 60.493 37.500 0.00 0.00 37.77 2.83
8740 9348 5.554636 CAAAACGCTTAACATGCAACAAAA 58.445 33.333 0.00 0.00 0.00 2.44
8741 9349 5.786401 AAACGCTTAACATGCAACAAAAA 57.214 30.435 0.00 0.00 0.00 1.94
8784 9392 9.500785 TGCATATAAACAATGAGATAAATCCGA 57.499 29.630 0.00 0.00 0.00 4.55
8816 9424 6.877611 AAAACAATGAGACAAATCCGTACT 57.122 33.333 0.00 0.00 0.00 2.73
8817 9425 6.481954 AAACAATGAGACAAATCCGTACTC 57.518 37.500 0.00 0.00 0.00 2.59
8818 9426 4.174009 ACAATGAGACAAATCCGTACTCG 58.826 43.478 0.00 0.00 0.00 4.18
8828 9436 2.813908 CGTACTCGGGCAGGCAAC 60.814 66.667 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 8.034804 TCATCTCATCTGAAGTTTTATTCGACA 58.965 33.333 0.00 0.00 31.52 4.35
67 68 8.034804 TCATCGTTCATCTCATCTGAAGTTTTA 58.965 33.333 0.00 0.00 33.49 1.52
69 70 6.401394 TCATCGTTCATCTCATCTGAAGTTT 58.599 36.000 0.00 0.00 33.49 2.66
77 78 7.712264 ATTTTCTCTCATCGTTCATCTCATC 57.288 36.000 0.00 0.00 0.00 2.92
119 120 7.879677 CCATGCTACCATATCTGAATTTAGTCA 59.120 37.037 0.00 0.00 0.00 3.41
199 200 2.855963 TCGTCACACTCAACGAGAAAAC 59.144 45.455 0.00 0.00 42.49 2.43
224 229 1.092921 TTCACGGAAGCGCACAACTT 61.093 50.000 11.47 0.00 0.00 2.66
257 262 6.575162 ACTAACATTTCGAAAAGCAAGGAT 57.425 33.333 15.66 0.00 0.00 3.24
322 327 7.158021 GGTTTCCTCATATCTAACCTCATGAG 58.842 42.308 16.24 16.24 42.57 2.90
337 342 1.358787 TCATGGCAAGGGTTTCCTCAT 59.641 47.619 0.00 0.00 44.07 2.90
433 440 3.747099 ATTCTACTTCGTGCAACATGC 57.253 42.857 0.00 0.00 45.29 4.06
499 513 7.484140 GGAAATTAAGGAGACAAATCATGGAC 58.516 38.462 0.00 0.00 0.00 4.02
511 525 4.647611 TGTTTCTGCGGAAATTAAGGAGA 58.352 39.130 23.02 0.00 42.45 3.71
521 535 3.410631 TCATAGGTTGTTTCTGCGGAA 57.589 42.857 3.13 3.13 0.00 4.30
565 579 3.755905 TGTGCATGATTACCGTGTGATTT 59.244 39.130 0.00 0.00 34.28 2.17
590 604 1.278985 TGAGTGAATCCTGAACGGCAT 59.721 47.619 0.00 0.00 0.00 4.40
593 607 2.939103 GGAATGAGTGAATCCTGAACGG 59.061 50.000 0.00 0.00 0.00 4.44
599 613 5.511386 AGTTGAAGGAATGAGTGAATCCT 57.489 39.130 0.00 0.00 45.43 3.24
634 648 0.958382 CATCAACGGGCGAAAAGGGA 60.958 55.000 0.00 0.00 0.00 4.20
646 660 1.811965 TGCCATTGGTTCTCATCAACG 59.188 47.619 4.26 0.00 0.00 4.10
651 665 4.895668 AAAATGTGCCATTGGTTCTCAT 57.104 36.364 4.26 0.00 0.00 2.90
695 709 2.560542 AGATGGAGGCTGATGTATCGAC 59.439 50.000 0.00 0.00 0.00 4.20
697 711 3.257873 AGAAGATGGAGGCTGATGTATCG 59.742 47.826 0.00 0.00 0.00 2.92
724 738 1.065854 AGTGGCCGATTTTGAGAGAGG 60.066 52.381 0.00 0.00 0.00 3.69
725 739 2.275318 GAGTGGCCGATTTTGAGAGAG 58.725 52.381 0.00 0.00 0.00 3.20
816 950 1.218316 CACCGCCACCTAGGAAGAC 59.782 63.158 17.98 0.00 41.22 3.01
817 951 1.229082 ACACCGCCACCTAGGAAGA 60.229 57.895 17.98 0.00 41.22 2.87
903 1037 4.341235 CCTTCGTTCCCCTTCTTTCTTTTT 59.659 41.667 0.00 0.00 0.00 1.94
904 1038 3.889538 CCTTCGTTCCCCTTCTTTCTTTT 59.110 43.478 0.00 0.00 0.00 2.27
905 1039 3.487372 CCTTCGTTCCCCTTCTTTCTTT 58.513 45.455 0.00 0.00 0.00 2.52
906 1040 2.224793 CCCTTCGTTCCCCTTCTTTCTT 60.225 50.000 0.00 0.00 0.00 2.52
907 1041 1.351350 CCCTTCGTTCCCCTTCTTTCT 59.649 52.381 0.00 0.00 0.00 2.52
908 1042 1.613520 CCCCTTCGTTCCCCTTCTTTC 60.614 57.143 0.00 0.00 0.00 2.62
909 1043 0.404426 CCCCTTCGTTCCCCTTCTTT 59.596 55.000 0.00 0.00 0.00 2.52
910 1044 0.770948 ACCCCTTCGTTCCCCTTCTT 60.771 55.000 0.00 0.00 0.00 2.52
911 1045 1.151877 ACCCCTTCGTTCCCCTTCT 60.152 57.895 0.00 0.00 0.00 2.85
912 1046 1.199425 AGACCCCTTCGTTCCCCTTC 61.199 60.000 0.00 0.00 0.00 3.46
913 1047 0.117742 TAGACCCCTTCGTTCCCCTT 59.882 55.000 0.00 0.00 0.00 3.95
914 1048 0.616964 GTAGACCCCTTCGTTCCCCT 60.617 60.000 0.00 0.00 0.00 4.79
915 1049 0.906282 TGTAGACCCCTTCGTTCCCC 60.906 60.000 0.00 0.00 0.00 4.81
916 1050 0.248565 GTGTAGACCCCTTCGTTCCC 59.751 60.000 0.00 0.00 0.00 3.97
917 1051 0.108945 CGTGTAGACCCCTTCGTTCC 60.109 60.000 0.00 0.00 0.00 3.62
918 1052 0.735287 GCGTGTAGACCCCTTCGTTC 60.735 60.000 0.00 0.00 0.00 3.95
919 1053 1.291272 GCGTGTAGACCCCTTCGTT 59.709 57.895 0.00 0.00 0.00 3.85
920 1054 2.643232 GGCGTGTAGACCCCTTCGT 61.643 63.158 0.00 0.00 0.00 3.85
921 1055 2.183555 GGCGTGTAGACCCCTTCG 59.816 66.667 0.00 0.00 0.00 3.79
922 1056 2.183555 CGGCGTGTAGACCCCTTC 59.816 66.667 0.00 0.00 0.00 3.46
923 1057 4.078516 GCGGCGTGTAGACCCCTT 62.079 66.667 9.37 0.00 0.00 3.95
1142 1285 1.301677 GCTCAGTTTTCAGGCCGGAG 61.302 60.000 5.05 0.00 0.00 4.63
1322 1466 1.557269 ATTCGGGTGGAGCTGAGCTT 61.557 55.000 9.00 0.00 39.88 3.74
1564 1720 4.808364 GCTGCAAACTCTAATAGACAGAGG 59.192 45.833 8.47 0.00 43.22 3.69
1588 1744 3.188460 CCGTAAACAAGGGACAATGACAG 59.812 47.826 0.00 0.00 34.90 3.51
1677 1833 2.102757 GGGGATTCTAGAAAGGGTCGAC 59.897 54.545 9.71 7.13 0.00 4.20
1719 1875 3.016736 CGCTGAATCCCTGGTACAATTT 58.983 45.455 0.00 0.00 38.70 1.82
1742 1898 5.911752 AGACATATTGAGAGTGCTTAGTGG 58.088 41.667 0.00 0.00 0.00 4.00
1744 1900 5.221145 CCGAGACATATTGAGAGTGCTTAGT 60.221 44.000 0.00 0.00 0.00 2.24
1756 1912 5.327091 CAAAAGAAGCACCGAGACATATTG 58.673 41.667 0.00 0.00 0.00 1.90
1763 1919 0.531974 ACGCAAAAGAAGCACCGAGA 60.532 50.000 0.00 0.00 0.00 4.04
1770 1926 2.755836 TGTCTGAACGCAAAAGAAGC 57.244 45.000 0.00 0.00 0.00 3.86
1779 1935 0.593128 ACTGCCAAATGTCTGAACGC 59.407 50.000 0.00 0.00 0.00 4.84
1780 1936 1.069022 CCACTGCCAAATGTCTGAACG 60.069 52.381 0.00 0.00 0.00 3.95
1907 2063 1.670811 GCACGGTAATGATGGGTGAAG 59.329 52.381 0.00 0.00 0.00 3.02
1909 2065 0.107410 GGCACGGTAATGATGGGTGA 60.107 55.000 0.00 0.00 0.00 4.02
1911 2067 0.180406 GAGGCACGGTAATGATGGGT 59.820 55.000 0.00 0.00 0.00 4.51
1914 2070 2.545526 GTGATGAGGCACGGTAATGATG 59.454 50.000 0.00 0.00 0.00 3.07
1915 2071 2.485479 GGTGATGAGGCACGGTAATGAT 60.485 50.000 0.00 0.00 39.66 2.45
1916 2072 1.134521 GGTGATGAGGCACGGTAATGA 60.135 52.381 0.00 0.00 39.66 2.57
1919 2075 0.249120 CAGGTGATGAGGCACGGTAA 59.751 55.000 0.00 0.00 39.66 2.85
1922 2078 1.742880 CACAGGTGATGAGGCACGG 60.743 63.158 0.00 0.00 39.66 4.94
1923 2079 0.320683 TTCACAGGTGATGAGGCACG 60.321 55.000 2.52 0.00 39.64 5.34
1924 2080 2.119801 ATTCACAGGTGATGAGGCAC 57.880 50.000 2.52 0.00 39.64 5.01
1925 2081 3.519107 TCTTATTCACAGGTGATGAGGCA 59.481 43.478 2.52 0.00 39.64 4.75
1926 2082 4.142609 TCTTATTCACAGGTGATGAGGC 57.857 45.455 2.52 0.00 39.64 4.70
1927 2083 5.678583 ACATCTTATTCACAGGTGATGAGG 58.321 41.667 2.52 4.66 39.64 3.86
2358 2515 1.225704 GGACCAGGAAGGCATGAGG 59.774 63.158 0.00 0.00 43.14 3.86
2539 2705 0.827507 GGCCTCCCTTGCAGTTTTCA 60.828 55.000 0.00 0.00 0.00 2.69
2773 2939 0.024619 GAATCGCGCGGAACAGTTAC 59.975 55.000 31.69 7.58 0.00 2.50
2788 2954 5.123979 AGGAAACCTACAAGCAAATCGAATC 59.876 40.000 0.00 0.00 28.47 2.52
2807 2973 2.551270 AGTCTGATACCCAGCAGGAAA 58.449 47.619 0.00 0.00 42.62 3.13
2863 3029 8.839310 AAGTTATGCAACTCACTATATCATCC 57.161 34.615 0.00 0.00 44.41 3.51
2986 3152 5.930837 AGGAAGAGATACCTTCTTCAGTG 57.069 43.478 14.70 0.00 41.60 3.66
3053 3219 6.581370 CACTACGAGTTTTGTTCATGTACTG 58.419 40.000 4.01 0.00 0.00 2.74
3054 3220 5.176958 GCACTACGAGTTTTGTTCATGTACT 59.823 40.000 4.01 0.00 0.00 2.73
3055 3221 5.050634 TGCACTACGAGTTTTGTTCATGTAC 60.051 40.000 0.00 0.00 0.00 2.90
3056 3222 5.050634 GTGCACTACGAGTTTTGTTCATGTA 60.051 40.000 10.32 0.00 0.00 2.29
3057 3223 3.874543 TGCACTACGAGTTTTGTTCATGT 59.125 39.130 0.00 0.00 0.00 3.21
3058 3224 4.024893 AGTGCACTACGAGTTTTGTTCATG 60.025 41.667 20.16 0.00 0.00 3.07
3059 3225 4.127171 AGTGCACTACGAGTTTTGTTCAT 58.873 39.130 20.16 0.00 0.00 2.57
3060 3226 3.527533 AGTGCACTACGAGTTTTGTTCA 58.472 40.909 20.16 0.00 0.00 3.18
3105 3271 2.229543 TCGTACGTGCAATAGTTCCACT 59.770 45.455 16.05 0.00 0.00 4.00
3106 3272 2.343544 GTCGTACGTGCAATAGTTCCAC 59.656 50.000 16.05 0.00 0.00 4.02
3144 3315 1.770658 CTGGATCTTGCATCCTACCCA 59.229 52.381 6.40 0.55 38.95 4.51
3167 3341 0.249031 GTGGAACCAAAGCAGCACAC 60.249 55.000 0.00 0.00 0.00 3.82
3168 3342 2.114638 GTGGAACCAAAGCAGCACA 58.885 52.632 0.00 0.00 0.00 4.57
3368 3606 3.788227 AAAGCAGGAGTGGACATACAA 57.212 42.857 0.00 0.00 0.00 2.41
3420 3658 9.515226 GTGGAATAGGATAGCAAAATAATACCA 57.485 33.333 0.00 0.00 0.00 3.25
3523 3761 1.135402 GCGATAACCACTGCAAAAGGG 60.135 52.381 4.06 0.00 0.00 3.95
3702 3941 2.875296 TGACCTGGCAGCTTTAATTGT 58.125 42.857 9.56 0.00 0.00 2.71
3720 3959 1.137675 CATCGTGCAGAGGGAGATTGA 59.862 52.381 0.00 0.00 0.00 2.57
3744 3983 2.038952 TCCACCAGAAGTCACTGAATGG 59.961 50.000 0.00 0.00 41.24 3.16
3844 4084 9.956720 GAAATCAACCTTCCAAATATGTGATAG 57.043 33.333 0.00 0.00 0.00 2.08
3903 4143 4.909088 ACCCGATGATTAATAGGTACCCAA 59.091 41.667 8.74 0.00 29.24 4.12
3958 4198 5.163754 GCACGTTCATAGGACATTAAGCTTT 60.164 40.000 3.20 0.00 0.00 3.51
4097 4337 9.357652 GAAGTTTAAATCAAAGCTAATGCATCA 57.642 29.630 0.00 0.00 42.74 3.07
4098 4338 8.526681 CGAAGTTTAAATCAAAGCTAATGCATC 58.473 33.333 0.00 0.00 42.74 3.91
4159 4400 4.937201 ACTAAAAACAAGGGAGCAAAGG 57.063 40.909 0.00 0.00 0.00 3.11
4161 4402 6.777213 TGTAACTAAAAACAAGGGAGCAAA 57.223 33.333 0.00 0.00 0.00 3.68
4226 4467 4.853924 TCAGGTTCCAAGAAAAGAATGC 57.146 40.909 0.00 0.00 0.00 3.56
4308 4549 4.383770 CGAGAAAACCTAAGATAAGCCCCA 60.384 45.833 0.00 0.00 0.00 4.96
4422 4663 5.635280 CACATCATATCTACTTAGCCAACCG 59.365 44.000 0.00 0.00 0.00 4.44
4520 4765 2.357327 TGCAAACTCATGCTCAATGC 57.643 45.000 0.67 0.00 46.54 3.56
4541 4786 6.516739 TTGGTGTGTTCAGTTGATAACAAA 57.483 33.333 0.00 0.00 37.35 2.83
4597 4842 3.424433 GGACGCGGTATTTTGTTTCAGAG 60.424 47.826 12.47 0.00 0.00 3.35
4761 5006 4.941325 CAGCATAGACATATGATGCACC 57.059 45.455 22.71 4.51 45.75 5.01
4824 5069 2.357637 ACACCTGTATGCACAAACACAC 59.642 45.455 0.00 0.00 33.22 3.82
4828 5073 3.408634 ACCTACACCTGTATGCACAAAC 58.591 45.455 0.00 0.00 33.22 2.93
4891 5136 0.693049 AGAAACAGGCCAATCCGTCT 59.307 50.000 5.01 0.00 40.77 4.18
4948 5193 6.220726 AGCAAGAACAGTAAACAAAATGGT 57.779 33.333 0.00 0.00 0.00 3.55
5007 5252 2.225791 TACGCGATGCTGGTTGCTCT 62.226 55.000 15.93 0.00 43.37 4.09
5347 5603 4.828939 CCACAGGCCAACATATGATAACAT 59.171 41.667 10.38 0.00 40.16 2.71
5348 5604 4.206375 CCACAGGCCAACATATGATAACA 58.794 43.478 10.38 0.00 0.00 2.41
5349 5605 4.207165 ACCACAGGCCAACATATGATAAC 58.793 43.478 10.38 0.00 0.00 1.89
5350 5606 4.518278 ACCACAGGCCAACATATGATAA 57.482 40.909 10.38 0.00 0.00 1.75
5401 5660 6.938596 TGATGGAGTAGAAAATATGGCATCTG 59.061 38.462 1.65 0.00 0.00 2.90
5440 5699 4.023193 GTGCATACAGCTAAAACAACACCT 60.023 41.667 0.00 0.00 45.94 4.00
5441 5700 4.226761 GTGCATACAGCTAAAACAACACC 58.773 43.478 0.00 0.00 45.94 4.16
5442 5701 4.854399 TGTGCATACAGCTAAAACAACAC 58.146 39.130 0.00 0.00 45.94 3.32
5443 5702 5.107109 CTGTGCATACAGCTAAAACAACA 57.893 39.130 0.00 0.00 46.93 3.33
5575 5835 6.127897 CGATGCTACAGAGATGGATATGTACA 60.128 42.308 0.00 0.00 0.00 2.90
5662 5922 8.029522 TCGAGGCATTATCTTAGCAAGTATAAG 58.970 37.037 0.00 0.00 0.00 1.73
5685 6070 5.610398 TCGGTAACTGGTACATATAGTCGA 58.390 41.667 5.08 0.00 38.20 4.20
5686 6071 5.929697 TCGGTAACTGGTACATATAGTCG 57.070 43.478 5.08 0.00 38.20 4.18
5699 6084 9.745880 ACATATTACTGTCTTAATCGGTAACTG 57.254 33.333 11.71 13.15 38.77 3.16
5744 6287 6.000840 TCCTGTAGATTTAACACATTGTGCA 58.999 36.000 16.62 2.20 36.98 4.57
5782 6325 4.907875 TCATCTTCCATCCCTAAGGGTTAG 59.092 45.833 0.00 0.00 44.74 2.34
5821 6364 6.986817 ACATTGGCTGCTTATACAAGTACTAG 59.013 38.462 0.00 0.00 34.00 2.57
5822 6365 6.761242 CACATTGGCTGCTTATACAAGTACTA 59.239 38.462 0.00 0.00 34.00 1.82
5823 6366 5.586243 CACATTGGCTGCTTATACAAGTACT 59.414 40.000 0.00 0.00 34.00 2.73
5889 6432 0.105039 CCGGGGGAGAAATCTCTTCG 59.895 60.000 10.09 10.59 42.48 3.79
5911 6454 2.283298 GTGTGTATCACTGGATGCAGG 58.717 52.381 19.22 7.70 45.08 4.85
5920 6463 3.953712 TGGTTCATCGTGTGTATCACT 57.046 42.857 1.72 0.00 44.16 3.41
5921 6464 6.656314 TTATTGGTTCATCGTGTGTATCAC 57.344 37.500 0.00 0.00 43.03 3.06
5926 6469 8.397906 CAATATCTTTATTGGTTCATCGTGTGT 58.602 33.333 0.00 0.00 40.61 3.72
5958 6501 8.746052 TTCCAAGTCTATTTCTTGAAGTTTCA 57.254 30.769 7.16 0.00 43.17 2.69
5974 6517 4.592942 TGCAAGCATCTTATTCCAAGTCT 58.407 39.130 0.00 0.00 0.00 3.24
5975 6518 4.201990 CCTGCAAGCATCTTATTCCAAGTC 60.202 45.833 0.00 0.00 0.00 3.01
5995 6558 1.318576 GAGTGGTCCACAAAACCCTG 58.681 55.000 24.02 0.00 36.74 4.45
6008 6571 5.423610 ACTCAAGTATCTAAGCATGAGTGGT 59.576 40.000 0.00 0.00 44.10 4.16
6012 6596 9.243637 GTAAGAACTCAAGTATCTAAGCATGAG 57.756 37.037 0.00 0.00 40.01 2.90
6064 6648 5.847111 ACAGCTCTACATATTTCACCGTA 57.153 39.130 0.00 0.00 0.00 4.02
6068 6652 8.383619 CAACACTAACAGCTCTACATATTTCAC 58.616 37.037 0.00 0.00 0.00 3.18
6070 6654 8.596380 GTCAACACTAACAGCTCTACATATTTC 58.404 37.037 0.00 0.00 0.00 2.17
6096 6680 4.999950 GGGTATTGACTGGCAGAATATGAG 59.000 45.833 23.66 0.00 0.00 2.90
6124 6708 0.690762 ATGTGTGGACGCTAAGGGTT 59.309 50.000 0.00 0.00 0.00 4.11
6185 6769 6.054941 CCTTTTCCTTGGCAGTTTTGTAAAT 58.945 36.000 0.00 0.00 0.00 1.40
6294 6878 9.559732 ACAATAACTGCTAGTCATAATTATGCA 57.440 29.630 18.89 12.54 33.76 3.96
6304 6888 8.020819 GCAAACATAAACAATAACTGCTAGTCA 58.979 33.333 0.00 0.00 0.00 3.41
6305 6889 8.020819 TGCAAACATAAACAATAACTGCTAGTC 58.979 33.333 0.00 0.00 0.00 2.59
6306 6890 7.881142 TGCAAACATAAACAATAACTGCTAGT 58.119 30.769 0.00 0.00 0.00 2.57
6307 6891 8.915871 ATGCAAACATAAACAATAACTGCTAG 57.084 30.769 0.00 0.00 33.67 3.42
6308 6892 8.739039 AGATGCAAACATAAACAATAACTGCTA 58.261 29.630 0.00 0.00 36.35 3.49
6309 6893 7.543172 CAGATGCAAACATAAACAATAACTGCT 59.457 33.333 0.00 0.00 36.35 4.24
6310 6894 7.329226 ACAGATGCAAACATAAACAATAACTGC 59.671 33.333 0.00 0.00 36.35 4.40
6311 6895 8.746922 ACAGATGCAAACATAAACAATAACTG 57.253 30.769 0.00 0.00 36.35 3.16
6312 6896 9.762933 AAACAGATGCAAACATAAACAATAACT 57.237 25.926 0.00 0.00 36.35 2.24
6314 6898 9.202273 GGAAACAGATGCAAACATAAACAATAA 57.798 29.630 0.00 0.00 36.35 1.40
6315 6899 8.584157 AGGAAACAGATGCAAACATAAACAATA 58.416 29.630 0.00 0.00 36.35 1.90
6316 6900 7.444299 AGGAAACAGATGCAAACATAAACAAT 58.556 30.769 0.00 0.00 36.35 2.71
6317 6901 6.815089 AGGAAACAGATGCAAACATAAACAA 58.185 32.000 0.00 0.00 36.35 2.83
6322 6906 7.014134 TCAGAAAAGGAAACAGATGCAAACATA 59.986 33.333 0.00 0.00 36.35 2.29
6358 6942 8.049721 AGCAAAGGAAAATATCTAGCTAGTGTT 58.950 33.333 20.10 10.63 0.00 3.32
6387 6971 7.822658 ACAGAGTGTAGATCAGAAGAGTTTAC 58.177 38.462 0.00 0.00 0.00 2.01
6388 6972 9.516546 TTACAGAGTGTAGATCAGAAGAGTTTA 57.483 33.333 0.00 0.00 33.92 2.01
6457 7049 5.287674 AGGATCATCTGAACATCAATCGT 57.712 39.130 0.00 0.00 0.00 3.73
6465 7057 4.776435 TGGCAATAGGATCATCTGAACA 57.224 40.909 0.00 0.00 0.00 3.18
6504 7096 2.017049 GTTGCTGTCTGAACCAACACT 58.983 47.619 9.88 0.00 37.93 3.55
6505 7097 1.065551 GGTTGCTGTCTGAACCAACAC 59.934 52.381 14.25 4.90 41.24 3.32
6575 7167 4.569943 TCTTCTGAACTTCAGGTGTATGC 58.430 43.478 17.12 0.00 44.39 3.14
6640 7232 6.036470 GCAAGGTTCTAAATTCTAATGCCAC 58.964 40.000 0.00 0.00 0.00 5.01
6759 7351 5.594317 ACAAAACTTGCTGAAGGTTCTACAT 59.406 36.000 0.00 0.00 38.21 2.29
6809 7401 7.117397 CCAATGAGCCTAGATGATAATTCCAT 58.883 38.462 0.00 0.00 0.00 3.41
6945 7537 9.185680 ACGAAGTGCCTGTACATCATATATATA 57.814 33.333 0.00 0.00 42.51 0.86
6946 7538 8.067751 ACGAAGTGCCTGTACATCATATATAT 57.932 34.615 0.00 0.00 42.51 0.86
6947 7539 7.462571 ACGAAGTGCCTGTACATCATATATA 57.537 36.000 0.00 0.00 42.51 0.86
6948 7540 6.346477 ACGAAGTGCCTGTACATCATATAT 57.654 37.500 0.00 0.00 42.51 0.86
7055 7647 0.604243 AACCATACACAAAGCGGCGA 60.604 50.000 12.98 0.00 0.00 5.54
7131 7723 8.788806 TCACCGTATTGTTTCTTGATTTTATGT 58.211 29.630 0.00 0.00 0.00 2.29
7157 7749 3.376859 TCTGCAAAGTCGTGTCATTGTTT 59.623 39.130 0.00 0.00 0.00 2.83
7287 7879 8.344098 CAACATTTTGTTTTGCATAATTCCAGT 58.656 29.630 0.00 0.00 38.77 4.00
7397 7989 3.623863 TCCACTTTCGATTGTTTTTCGC 58.376 40.909 0.00 0.00 36.56 4.70
7405 7997 5.505173 AAGGCATATTCCACTTTCGATTG 57.495 39.130 0.00 0.00 0.00 2.67
7452 8046 3.439129 GCCGTACTCAAATTTTAGCCAGT 59.561 43.478 0.00 0.00 0.00 4.00
7463 8061 0.244450 CCCGTACAGCCGTACTCAAA 59.756 55.000 8.54 0.00 44.97 2.69
7511 8109 4.160439 TCCTGTGCTATCGTTTCTTCAGAT 59.840 41.667 0.00 0.00 0.00 2.90
7547 8145 5.327091 CGAAATACTCATGGCAAGACTTTG 58.673 41.667 0.00 0.00 37.36 2.77
7554 8152 3.693578 TCAATGCGAAATACTCATGGCAA 59.306 39.130 0.00 0.00 33.72 4.52
7581 8179 6.183360 GCATCCATTTAGTGATGGGAATGAAA 60.183 38.462 4.23 0.00 45.42 2.69
7718 8319 3.689347 ACTGGTAAATGAGCATGCTTCA 58.311 40.909 23.61 20.26 34.32 3.02
7721 8322 4.338879 AGAAACTGGTAAATGAGCATGCT 58.661 39.130 22.92 22.92 34.32 3.79
7725 8326 4.640771 AGGAGAAACTGGTAAATGAGCA 57.359 40.909 0.00 0.00 0.00 4.26
7743 8344 6.368779 AATACAAAGCACTGGTAAGTAGGA 57.631 37.500 0.00 0.00 33.79 2.94
7849 8451 2.035832 ACCAGGCAAAATAGTTGTGTGC 59.964 45.455 0.00 0.00 34.42 4.57
7871 8473 1.616159 GTTTTAGCCCAGAAGCACCA 58.384 50.000 0.00 0.00 34.23 4.17
7877 8479 2.298729 GCACAATGGTTTTAGCCCAGAA 59.701 45.455 0.00 0.00 34.92 3.02
7913 8515 1.347707 TCGGAAACCACAGAAGCAGAT 59.652 47.619 0.00 0.00 0.00 2.90
7977 8579 1.734388 AACGGTCTGTTTGCTTGCCC 61.734 55.000 0.00 0.00 37.59 5.36
7994 8597 5.957798 TCCTCATCAATTTTGCTCATCAAC 58.042 37.500 0.00 0.00 33.73 3.18
8047 8651 7.663827 ACAACCATTATAGATCATGGCATTTG 58.336 34.615 9.21 8.95 43.52 2.32
8168 8774 6.725364 AGATGGTGGATGAGAATTAACTTGT 58.275 36.000 0.00 0.00 0.00 3.16
8215 8821 1.066071 TCTGTCCAACACCGTGACAAA 60.066 47.619 5.28 0.00 38.45 2.83
8224 8830 4.304110 TCGTTGTATCTTCTGTCCAACAC 58.696 43.478 0.00 0.00 36.15 3.32
8245 8851 9.549509 GTCGATGTGAAGTCTATGATAAGTATC 57.450 37.037 0.00 0.00 0.00 2.24
8254 8861 5.869344 TCTTTTGGTCGATGTGAAGTCTATG 59.131 40.000 0.00 0.00 0.00 2.23
8299 8906 0.746563 ACAAGTCAACGGTGGTGTGG 60.747 55.000 0.00 0.00 0.00 4.17
8301 8908 1.202604 CCTACAAGTCAACGGTGGTGT 60.203 52.381 0.00 5.58 0.00 4.16
8306 8913 3.547054 TTGAACCTACAAGTCAACGGT 57.453 42.857 0.00 0.00 0.00 4.83
8353 8961 3.451141 TGTCAATTTTGCAACCTCACC 57.549 42.857 0.00 0.00 0.00 4.02
8354 8962 4.874970 AGATGTCAATTTTGCAACCTCAC 58.125 39.130 0.00 0.00 0.00 3.51
8373 8981 7.112122 TGTCACCAAATGAGCTGTAAATAGAT 58.888 34.615 0.00 0.00 38.28 1.98
8377 8985 5.072741 ACTGTCACCAAATGAGCTGTAAAT 58.927 37.500 0.00 0.00 38.28 1.40
8382 8990 1.462283 CGACTGTCACCAAATGAGCTG 59.538 52.381 8.73 0.00 38.28 4.24
8389 8997 1.338890 TGGACCCGACTGTCACCAAA 61.339 55.000 8.73 0.00 36.97 3.28
8399 9007 3.343617 TCATGAATCTTTTGGACCCGAC 58.656 45.455 0.00 0.00 0.00 4.79
8401 9009 3.316308 GGATCATGAATCTTTTGGACCCG 59.684 47.826 0.00 0.00 34.56 5.28
8416 9024 1.733912 CAGACGTTGTGGTGGATCATG 59.266 52.381 0.00 0.00 0.00 3.07
8417 9025 1.623311 TCAGACGTTGTGGTGGATCAT 59.377 47.619 0.00 0.00 0.00 2.45
8418 9026 1.044611 TCAGACGTTGTGGTGGATCA 58.955 50.000 0.00 0.00 0.00 2.92
8419 9027 2.069273 CTTCAGACGTTGTGGTGGATC 58.931 52.381 0.00 0.00 0.00 3.36
8420 9028 1.878102 GCTTCAGACGTTGTGGTGGAT 60.878 52.381 0.00 0.00 0.00 3.41
8421 9029 0.531974 GCTTCAGACGTTGTGGTGGA 60.532 55.000 0.00 0.00 0.00 4.02
8422 9030 0.532862 AGCTTCAGACGTTGTGGTGG 60.533 55.000 0.00 0.00 0.00 4.61
8423 9031 0.861837 GAGCTTCAGACGTTGTGGTG 59.138 55.000 0.00 0.00 0.00 4.17
8424 9032 0.464036 TGAGCTTCAGACGTTGTGGT 59.536 50.000 0.00 0.00 0.00 4.16
8425 9033 3.289128 TGAGCTTCAGACGTTGTGG 57.711 52.632 0.00 0.00 0.00 4.17
8434 9042 5.543507 ACCTAATATGACCTGAGCTTCAG 57.456 43.478 6.28 6.28 43.91 3.02
8435 9043 5.425217 TCAACCTAATATGACCTGAGCTTCA 59.575 40.000 0.00 0.00 0.00 3.02
8436 9044 5.918608 TCAACCTAATATGACCTGAGCTTC 58.081 41.667 0.00 0.00 0.00 3.86
8437 9045 5.957771 TCAACCTAATATGACCTGAGCTT 57.042 39.130 0.00 0.00 0.00 3.74
8438 9046 5.604231 TCATCAACCTAATATGACCTGAGCT 59.396 40.000 0.00 0.00 0.00 4.09
8439 9047 5.858381 TCATCAACCTAATATGACCTGAGC 58.142 41.667 0.00 0.00 0.00 4.26
8440 9048 6.933521 CCTTCATCAACCTAATATGACCTGAG 59.066 42.308 0.00 0.00 29.64 3.35
8441 9049 6.386927 ACCTTCATCAACCTAATATGACCTGA 59.613 38.462 0.00 0.00 29.64 3.86
8442 9050 6.595682 ACCTTCATCAACCTAATATGACCTG 58.404 40.000 0.00 0.00 29.64 4.00
8443 9051 6.831664 ACCTTCATCAACCTAATATGACCT 57.168 37.500 0.00 0.00 29.64 3.85
8444 9052 8.211629 AGTAACCTTCATCAACCTAATATGACC 58.788 37.037 0.00 0.00 29.64 4.02
8445 9053 9.262358 GAGTAACCTTCATCAACCTAATATGAC 57.738 37.037 0.00 0.00 29.64 3.06
8446 9054 8.988060 TGAGTAACCTTCATCAACCTAATATGA 58.012 33.333 0.00 0.00 0.00 2.15
8447 9055 9.613428 TTGAGTAACCTTCATCAACCTAATATG 57.387 33.333 0.00 0.00 0.00 1.78
8450 9058 8.934023 TTTTGAGTAACCTTCATCAACCTAAT 57.066 30.769 0.00 0.00 31.72 1.73
8451 9059 8.754991 TTTTTGAGTAACCTTCATCAACCTAA 57.245 30.769 0.00 0.00 31.72 2.69
8475 9083 9.558396 TGGCAAATTTATTCATCAACTTTCTTT 57.442 25.926 0.00 0.00 0.00 2.52
8476 9084 8.992073 GTGGCAAATTTATTCATCAACTTTCTT 58.008 29.630 0.00 0.00 0.00 2.52
8477 9085 8.149647 TGTGGCAAATTTATTCATCAACTTTCT 58.850 29.630 0.00 0.00 0.00 2.52
8478 9086 8.309163 TGTGGCAAATTTATTCATCAACTTTC 57.691 30.769 0.00 0.00 0.00 2.62
8479 9087 8.558700 GTTGTGGCAAATTTATTCATCAACTTT 58.441 29.630 0.00 0.00 31.96 2.66
8480 9088 7.933033 AGTTGTGGCAAATTTATTCATCAACTT 59.067 29.630 17.23 10.13 38.62 2.66
8481 9089 7.444299 AGTTGTGGCAAATTTATTCATCAACT 58.556 30.769 17.23 17.23 37.51 3.16
8482 9090 7.656707 AGTTGTGGCAAATTTATTCATCAAC 57.343 32.000 0.00 7.36 33.92 3.18
8483 9091 9.941325 ATTAGTTGTGGCAAATTTATTCATCAA 57.059 25.926 0.00 0.00 0.00 2.57
8484 9092 9.585099 GATTAGTTGTGGCAAATTTATTCATCA 57.415 29.630 0.00 0.00 0.00 3.07
8485 9093 9.807649 AGATTAGTTGTGGCAAATTTATTCATC 57.192 29.630 0.00 0.00 0.00 2.92
8488 9096 9.736023 CCTAGATTAGTTGTGGCAAATTTATTC 57.264 33.333 0.00 0.00 0.00 1.75
8489 9097 8.197439 GCCTAGATTAGTTGTGGCAAATTTATT 58.803 33.333 0.00 0.00 40.04 1.40
8490 9098 7.341769 TGCCTAGATTAGTTGTGGCAAATTTAT 59.658 33.333 0.00 0.00 45.92 1.40
8491 9099 6.661377 TGCCTAGATTAGTTGTGGCAAATTTA 59.339 34.615 0.00 0.00 45.92 1.40
8492 9100 5.480073 TGCCTAGATTAGTTGTGGCAAATTT 59.520 36.000 0.00 0.00 45.92 1.82
8493 9101 5.016173 TGCCTAGATTAGTTGTGGCAAATT 58.984 37.500 0.00 0.00 45.92 1.82
8494 9102 4.599041 TGCCTAGATTAGTTGTGGCAAAT 58.401 39.130 0.00 0.00 45.92 2.32
8495 9103 4.027674 TGCCTAGATTAGTTGTGGCAAA 57.972 40.909 0.00 0.00 45.92 3.68
8496 9104 3.712016 TGCCTAGATTAGTTGTGGCAA 57.288 42.857 0.00 0.00 45.92 4.52
8498 9106 4.010349 AGTTTGCCTAGATTAGTTGTGGC 58.990 43.478 0.00 0.00 40.62 5.01
8499 9107 5.003804 ACAGTTTGCCTAGATTAGTTGTGG 58.996 41.667 0.00 0.00 0.00 4.17
8500 9108 5.470098 ACACAGTTTGCCTAGATTAGTTGTG 59.530 40.000 10.66 10.66 38.43 3.33
8501 9109 5.621193 ACACAGTTTGCCTAGATTAGTTGT 58.379 37.500 0.00 0.00 0.00 3.32
8502 9110 6.560253 AACACAGTTTGCCTAGATTAGTTG 57.440 37.500 0.00 0.00 0.00 3.16
8503 9111 6.515035 GCAAACACAGTTTGCCTAGATTAGTT 60.515 38.462 28.04 0.00 46.51 2.24
8504 9112 5.048713 GCAAACACAGTTTGCCTAGATTAGT 60.049 40.000 28.04 0.00 46.51 2.24
8505 9113 5.393962 GCAAACACAGTTTGCCTAGATTAG 58.606 41.667 28.04 1.79 46.51 1.73
8506 9114 5.371115 GCAAACACAGTTTGCCTAGATTA 57.629 39.130 28.04 0.00 46.51 1.75
8507 9115 4.243007 GCAAACACAGTTTGCCTAGATT 57.757 40.909 28.04 0.00 46.51 2.40
8508 9116 3.923017 GCAAACACAGTTTGCCTAGAT 57.077 42.857 28.04 0.00 46.51 1.98
8515 9123 0.539051 TTGGGGGCAAACACAGTTTG 59.461 50.000 16.07 16.07 0.00 2.93
8516 9124 1.280457 TTTGGGGGCAAACACAGTTT 58.720 45.000 0.00 0.00 0.00 2.66
8517 9125 1.280457 TTTTGGGGGCAAACACAGTT 58.720 45.000 0.00 0.00 0.00 3.16
8518 9126 1.209261 CTTTTTGGGGGCAAACACAGT 59.791 47.619 0.00 0.00 0.00 3.55
8519 9127 1.209261 ACTTTTTGGGGGCAAACACAG 59.791 47.619 0.00 0.00 0.00 3.66
8520 9128 1.065854 CACTTTTTGGGGGCAAACACA 60.066 47.619 0.00 0.00 0.00 3.72
8521 9129 1.662517 CACTTTTTGGGGGCAAACAC 58.337 50.000 0.00 0.00 0.00 3.32
8522 9130 0.107459 GCACTTTTTGGGGGCAAACA 60.107 50.000 0.00 0.00 0.00 2.83
8523 9131 1.157257 CGCACTTTTTGGGGGCAAAC 61.157 55.000 0.00 0.00 34.46 2.93
8524 9132 1.144936 CGCACTTTTTGGGGGCAAA 59.855 52.632 0.00 0.00 34.46 3.68
8525 9133 2.818132 CGCACTTTTTGGGGGCAA 59.182 55.556 0.00 0.00 34.46 4.52
8530 9138 1.028905 TGTTCTCCGCACTTTTTGGG 58.971 50.000 0.00 0.00 37.91 4.12
8531 9139 2.861462 TTGTTCTCCGCACTTTTTGG 57.139 45.000 0.00 0.00 0.00 3.28
8532 9140 3.001168 CGTTTTGTTCTCCGCACTTTTTG 60.001 43.478 0.00 0.00 0.00 2.44
8533 9141 3.175929 CGTTTTGTTCTCCGCACTTTTT 58.824 40.909 0.00 0.00 0.00 1.94
8534 9142 2.792749 CGTTTTGTTCTCCGCACTTTT 58.207 42.857 0.00 0.00 0.00 2.27
8535 9143 1.533129 GCGTTTTGTTCTCCGCACTTT 60.533 47.619 0.00 0.00 45.12 2.66
8536 9144 0.028902 GCGTTTTGTTCTCCGCACTT 59.971 50.000 0.00 0.00 45.12 3.16
8537 9145 1.647084 GCGTTTTGTTCTCCGCACT 59.353 52.632 0.00 0.00 45.12 4.40
8538 9146 4.205584 GCGTTTTGTTCTCCGCAC 57.794 55.556 0.00 0.00 45.12 5.34
8540 9148 2.254350 GGGCGTTTTGTTCTCCGC 59.746 61.111 0.00 0.00 45.05 5.54
8541 9149 2.554272 CGGGCGTTTTGTTCTCCG 59.446 61.111 0.00 0.00 0.00 4.63
8542 9150 2.254350 GCGGGCGTTTTGTTCTCC 59.746 61.111 0.00 0.00 0.00 3.71
8543 9151 2.254350 GGCGGGCGTTTTGTTCTC 59.746 61.111 0.00 0.00 0.00 2.87
8544 9152 2.517402 TGGCGGGCGTTTTGTTCT 60.517 55.556 0.00 0.00 0.00 3.01
8545 9153 2.354188 GTGGCGGGCGTTTTGTTC 60.354 61.111 0.00 0.00 0.00 3.18
8546 9154 2.621371 CTTGTGGCGGGCGTTTTGTT 62.621 55.000 0.00 0.00 0.00 2.83
8547 9155 3.132481 CTTGTGGCGGGCGTTTTGT 62.132 57.895 0.00 0.00 0.00 2.83
8548 9156 2.354539 CTTGTGGCGGGCGTTTTG 60.355 61.111 0.00 0.00 0.00 2.44
8549 9157 2.831284 ACTTGTGGCGGGCGTTTT 60.831 55.556 0.00 0.00 0.00 2.43
8550 9158 3.591835 CACTTGTGGCGGGCGTTT 61.592 61.111 0.00 0.00 0.00 3.60
8551 9159 4.868116 ACACTTGTGGCGGGCGTT 62.868 61.111 5.72 0.00 0.00 4.84
8554 9162 3.660111 GTCACACTTGTGGCGGGC 61.660 66.667 9.46 0.00 45.65 6.13
8559 9167 4.362279 CCAAATCTTTGTCACACTTGTGG 58.638 43.478 9.46 0.00 39.51 4.17
8560 9168 3.798337 GCCAAATCTTTGTCACACTTGTG 59.202 43.478 2.75 2.75 39.94 3.33
8561 9169 3.446873 TGCCAAATCTTTGTCACACTTGT 59.553 39.130 2.29 0.00 36.45 3.16
8562 9170 4.044336 TGCCAAATCTTTGTCACACTTG 57.956 40.909 2.29 0.00 36.45 3.16
8563 9171 4.734398 TTGCCAAATCTTTGTCACACTT 57.266 36.364 2.29 0.00 36.45 3.16
8564 9172 4.734398 TTTGCCAAATCTTTGTCACACT 57.266 36.364 2.29 0.00 36.45 3.55
8565 9173 5.793026 TTTTTGCCAAATCTTTGTCACAC 57.207 34.783 0.00 0.00 36.45 3.82
8566 9174 6.596888 TCAATTTTTGCCAAATCTTTGTCACA 59.403 30.769 0.00 0.00 36.45 3.58
8567 9175 7.014092 TCAATTTTTGCCAAATCTTTGTCAC 57.986 32.000 0.00 0.00 36.45 3.67
8568 9176 7.336427 ACTTCAATTTTTGCCAAATCTTTGTCA 59.664 29.630 0.00 0.00 36.45 3.58
8569 9177 7.696755 ACTTCAATTTTTGCCAAATCTTTGTC 58.303 30.769 0.00 0.00 36.45 3.18
8570 9178 7.553760 AGACTTCAATTTTTGCCAAATCTTTGT 59.446 29.630 0.00 0.00 36.45 2.83
8571 9179 7.922837 AGACTTCAATTTTTGCCAAATCTTTG 58.077 30.769 0.00 0.00 37.90 2.77
8572 9180 8.510243 AAGACTTCAATTTTTGCCAAATCTTT 57.490 26.923 0.00 0.00 0.00 2.52
8573 9181 9.783081 ATAAGACTTCAATTTTTGCCAAATCTT 57.217 25.926 0.00 0.00 0.00 2.40
8574 9182 9.211485 CATAAGACTTCAATTTTTGCCAAATCT 57.789 29.630 0.00 0.00 0.00 2.40
8575 9183 9.206870 TCATAAGACTTCAATTTTTGCCAAATC 57.793 29.630 0.00 0.00 0.00 2.17
8576 9184 9.729281 ATCATAAGACTTCAATTTTTGCCAAAT 57.271 25.926 0.00 0.00 0.00 2.32
8579 9187 9.859427 CTTATCATAAGACTTCAATTTTTGCCA 57.141 29.630 0.00 0.00 0.00 4.92
8580 9188 9.860898 ACTTATCATAAGACTTCAATTTTTGCC 57.139 29.630 11.62 0.00 0.00 4.52
8589 9197 9.809096 GAATCTGTCACTTATCATAAGACTTCA 57.191 33.333 11.62 4.36 0.00 3.02
8590 9198 9.809096 TGAATCTGTCACTTATCATAAGACTTC 57.191 33.333 11.62 2.04 0.00 3.01
8591 9199 9.814899 CTGAATCTGTCACTTATCATAAGACTT 57.185 33.333 11.62 0.00 31.13 3.01
8592 9200 8.420222 CCTGAATCTGTCACTTATCATAAGACT 58.580 37.037 11.62 0.00 31.13 3.24
8593 9201 8.417106 TCCTGAATCTGTCACTTATCATAAGAC 58.583 37.037 11.62 0.90 31.13 3.01
8594 9202 8.539117 TCCTGAATCTGTCACTTATCATAAGA 57.461 34.615 11.62 0.00 31.13 2.10
8595 9203 9.775854 AATCCTGAATCTGTCACTTATCATAAG 57.224 33.333 2.58 2.58 31.13 1.73
8597 9205 9.551734 CAAATCCTGAATCTGTCACTTATCATA 57.448 33.333 0.00 0.00 31.13 2.15
8598 9206 8.270030 TCAAATCCTGAATCTGTCACTTATCAT 58.730 33.333 0.00 0.00 31.13 2.45
8599 9207 7.623630 TCAAATCCTGAATCTGTCACTTATCA 58.376 34.615 0.00 0.00 31.13 2.15
8600 9208 7.254727 GCTCAAATCCTGAATCTGTCACTTATC 60.255 40.741 0.00 0.00 32.17 1.75
8601 9209 6.541641 GCTCAAATCCTGAATCTGTCACTTAT 59.458 38.462 0.00 0.00 32.17 1.73
8602 9210 5.877012 GCTCAAATCCTGAATCTGTCACTTA 59.123 40.000 0.00 0.00 32.17 2.24
8603 9211 4.699257 GCTCAAATCCTGAATCTGTCACTT 59.301 41.667 0.00 0.00 32.17 3.16
8604 9212 4.260170 GCTCAAATCCTGAATCTGTCACT 58.740 43.478 0.00 0.00 32.17 3.41
8605 9213 4.005650 TGCTCAAATCCTGAATCTGTCAC 58.994 43.478 0.00 0.00 32.17 3.67
8606 9214 4.290711 TGCTCAAATCCTGAATCTGTCA 57.709 40.909 0.00 0.00 32.17 3.58
8607 9215 4.036498 CCATGCTCAAATCCTGAATCTGTC 59.964 45.833 0.00 0.00 32.17 3.51
8608 9216 3.952323 CCATGCTCAAATCCTGAATCTGT 59.048 43.478 0.00 0.00 32.17 3.41
8609 9217 3.243434 GCCATGCTCAAATCCTGAATCTG 60.243 47.826 0.00 0.00 32.17 2.90
8610 9218 2.957006 GCCATGCTCAAATCCTGAATCT 59.043 45.455 0.00 0.00 32.17 2.40
8611 9219 2.035576 GGCCATGCTCAAATCCTGAATC 59.964 50.000 0.00 0.00 32.17 2.52
8612 9220 2.037144 GGCCATGCTCAAATCCTGAAT 58.963 47.619 0.00 0.00 32.17 2.57
8613 9221 1.272592 TGGCCATGCTCAAATCCTGAA 60.273 47.619 0.00 0.00 32.17 3.02
8614 9222 0.332293 TGGCCATGCTCAAATCCTGA 59.668 50.000 0.00 0.00 0.00 3.86
8615 9223 0.744874 CTGGCCATGCTCAAATCCTG 59.255 55.000 5.51 0.00 0.00 3.86
8616 9224 0.627451 TCTGGCCATGCTCAAATCCT 59.373 50.000 5.51 0.00 0.00 3.24
8617 9225 1.030457 CTCTGGCCATGCTCAAATCC 58.970 55.000 5.51 0.00 0.00 3.01
8618 9226 0.384669 GCTCTGGCCATGCTCAAATC 59.615 55.000 19.77 0.00 0.00 2.17
8619 9227 0.033405 AGCTCTGGCCATGCTCAAAT 60.033 50.000 22.84 5.83 39.73 2.32
8620 9228 0.620030 TAGCTCTGGCCATGCTCAAA 59.380 50.000 29.13 14.76 39.73 2.69
8621 9229 0.620030 TTAGCTCTGGCCATGCTCAA 59.380 50.000 29.13 20.14 39.73 3.02
8622 9230 0.620030 TTTAGCTCTGGCCATGCTCA 59.380 50.000 29.13 19.63 39.73 4.26
8623 9231 1.020437 GTTTAGCTCTGGCCATGCTC 58.980 55.000 29.13 16.09 39.73 4.26
8624 9232 0.622665 AGTTTAGCTCTGGCCATGCT 59.377 50.000 28.53 28.53 39.73 3.79
8625 9233 1.020437 GAGTTTAGCTCTGGCCATGC 58.980 55.000 19.53 19.53 40.98 4.06
8634 9242 6.149474 TGCTTTTGGTCATTAGAGTTTAGCTC 59.851 38.462 0.00 0.00 44.45 4.09
8635 9243 6.003950 TGCTTTTGGTCATTAGAGTTTAGCT 58.996 36.000 0.00 0.00 0.00 3.32
8636 9244 6.254281 TGCTTTTGGTCATTAGAGTTTAGC 57.746 37.500 0.00 0.00 0.00 3.09
8637 9245 9.132521 CAAATGCTTTTGGTCATTAGAGTTTAG 57.867 33.333 15.45 0.00 38.85 1.85
8639 9247 7.951530 CAAATGCTTTTGGTCATTAGAGTTT 57.048 32.000 15.45 0.00 38.85 2.66
8652 9260 6.589907 GGTGAGTATAAACCCAAATGCTTTTG 59.410 38.462 16.12 16.12 41.59 2.44
8653 9261 6.268847 TGGTGAGTATAAACCCAAATGCTTTT 59.731 34.615 0.00 0.00 35.44 2.27
8654 9262 5.777732 TGGTGAGTATAAACCCAAATGCTTT 59.222 36.000 0.00 0.00 35.44 3.51
8655 9263 5.329399 TGGTGAGTATAAACCCAAATGCTT 58.671 37.500 0.00 0.00 35.44 3.91
8656 9264 4.929479 TGGTGAGTATAAACCCAAATGCT 58.071 39.130 0.00 0.00 35.44 3.79
8657 9265 5.852282 ATGGTGAGTATAAACCCAAATGC 57.148 39.130 0.00 0.00 35.44 3.56
8658 9266 8.287439 TGTTATGGTGAGTATAAACCCAAATG 57.713 34.615 0.00 0.00 35.44 2.32
8661 9269 9.567776 CATATGTTATGGTGAGTATAAACCCAA 57.432 33.333 0.00 0.00 35.44 4.12
8662 9270 7.663905 GCATATGTTATGGTGAGTATAAACCCA 59.336 37.037 4.29 0.00 35.44 4.51
8663 9271 7.663905 TGCATATGTTATGGTGAGTATAAACCC 59.336 37.037 4.29 0.00 35.44 4.11
8664 9272 8.615878 TGCATATGTTATGGTGAGTATAAACC 57.384 34.615 4.29 0.00 36.96 3.27
8671 9279 9.578576 AAAATAGATGCATATGTTATGGTGAGT 57.421 29.630 3.54 0.00 0.00 3.41
8697 9305 9.430838 CGTTTTGCAATTAATTTCAATGTTCAA 57.569 25.926 12.96 3.14 0.00 2.69
8698 9306 7.585573 GCGTTTTGCAATTAATTTCAATGTTCA 59.414 29.630 12.96 0.00 45.45 3.18
8699 9307 7.917142 GCGTTTTGCAATTAATTTCAATGTTC 58.083 30.769 12.96 5.06 45.45 3.18
8700 9308 7.834821 GCGTTTTGCAATTAATTTCAATGTT 57.165 28.000 12.96 0.00 45.45 2.71
8716 9324 2.537625 TGTTGCATGTTAAGCGTTTTGC 59.462 40.909 0.00 0.07 46.98 3.68
8717 9325 4.768659 TTGTTGCATGTTAAGCGTTTTG 57.231 36.364 0.00 0.00 33.85 2.44
8718 9326 5.786401 TTTTGTTGCATGTTAAGCGTTTT 57.214 30.435 0.00 0.00 33.85 2.43
8719 9327 5.786401 TTTTTGTTGCATGTTAAGCGTTT 57.214 30.435 0.00 0.00 33.85 3.60
8758 9366 9.500785 TCGGATTTATCTCATTGTTTATATGCA 57.499 29.630 0.00 0.00 0.00 3.96
8792 9400 7.272037 AGTACGGATTTGTCTCATTGTTTTT 57.728 32.000 0.00 0.00 0.00 1.94
8793 9401 6.347402 CGAGTACGGATTTGTCTCATTGTTTT 60.347 38.462 0.00 0.00 35.72 2.43
8794 9402 5.120208 CGAGTACGGATTTGTCTCATTGTTT 59.880 40.000 0.00 0.00 35.72 2.83
8795 9403 4.625742 CGAGTACGGATTTGTCTCATTGTT 59.374 41.667 0.00 0.00 35.72 2.83
8796 9404 4.174009 CGAGTACGGATTTGTCTCATTGT 58.826 43.478 0.00 0.00 35.72 2.71
8797 9405 4.761910 CGAGTACGGATTTGTCTCATTG 57.238 45.455 0.00 0.00 35.72 2.82
8811 9419 2.813908 GTTGCCTGCCCGAGTACG 60.814 66.667 0.00 0.00 39.43 3.67
8812 9420 1.448013 GAGTTGCCTGCCCGAGTAC 60.448 63.158 0.00 0.00 0.00 2.73
8813 9421 2.656069 GGAGTTGCCTGCCCGAGTA 61.656 63.158 0.00 0.00 0.00 2.59
8814 9422 4.021925 GGAGTTGCCTGCCCGAGT 62.022 66.667 0.00 0.00 0.00 4.18
8815 9423 4.785453 GGGAGTTGCCTGCCCGAG 62.785 72.222 0.00 0.00 43.12 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.