Multiple sequence alignment - TraesCS5D01G514400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G514400 chr5D 100.000 3210 0 0 1 3210 538101154 538097945 0.000000e+00 5928
1 TraesCS5D01G514400 chr5D 83.130 409 48 13 1694 2090 51327000 51326601 1.420000e-93 353
2 TraesCS5D01G514400 chr5B 96.165 1356 45 4 1088 2437 678581503 678580149 0.000000e+00 2209
3 TraesCS5D01G514400 chr5B 95.159 661 25 3 1838 2495 678651971 678652627 0.000000e+00 1037
4 TraesCS5D01G514400 chr5B 92.738 661 24 9 1838 2495 678688090 678688729 0.000000e+00 933
5 TraesCS5D01G514400 chr5B 95.752 565 22 2 2576 3138 678577534 678576970 0.000000e+00 909
6 TraesCS5D01G514400 chr5B 89.120 432 19 16 2708 3138 678696360 678696764 2.210000e-141 512
7 TraesCS5D01G514400 chr5B 91.940 335 20 5 2222 2551 678596259 678595927 2.260000e-126 462
8 TraesCS5D01G514400 chr5B 91.935 186 15 0 904 1089 678592452 678592267 8.830000e-66 261
9 TraesCS5D01G514400 chr5B 98.780 82 1 0 3057 3138 679003211 679003130 2.580000e-31 147
10 TraesCS5D01G514400 chr5B 97.333 75 2 0 3136 3210 678696818 678696892 9.350000e-26 128
11 TraesCS5D01G514400 chr5B 97.260 73 2 0 3138 3210 678576798 678576726 1.210000e-24 124
12 TraesCS5D01G514400 chr4A 94.790 1094 34 11 1895 2983 632239001 632237926 0.000000e+00 1683
13 TraesCS5D01G514400 chr4A 91.379 174 12 2 2966 3138 632237971 632237800 5.350000e-58 235
14 TraesCS5D01G514400 chr4A 97.333 75 2 0 3136 3210 632237746 632237672 9.350000e-26 128
15 TraesCS5D01G514400 chr7B 95.806 620 25 1 22 641 612846800 612846182 0.000000e+00 1000
16 TraesCS5D01G514400 chr6A 95.942 616 25 0 19 634 16369324 16369939 0.000000e+00 1000
17 TraesCS5D01G514400 chr6A 81.208 1043 140 27 1226 2221 614524678 614523645 0.000000e+00 789
18 TraesCS5D01G514400 chr3B 96.078 612 20 2 22 633 757924526 757923919 0.000000e+00 994
19 TraesCS5D01G514400 chr3B 95.603 614 22 2 22 634 606574020 606573411 0.000000e+00 979
20 TraesCS5D01G514400 chr1B 95.624 617 27 0 19 635 59471832 59472448 0.000000e+00 990
21 TraesCS5D01G514400 chr1D 95.624 617 26 1 19 635 431819992 431820607 0.000000e+00 989
22 TraesCS5D01G514400 chr1A 95.122 615 28 2 22 635 539736444 539735831 0.000000e+00 968
23 TraesCS5D01G514400 chrUn 94.943 613 30 1 22 634 55740047 55739436 0.000000e+00 959
24 TraesCS5D01G514400 chr2B 94.780 613 31 1 22 634 67329110 67328499 0.000000e+00 953
25 TraesCS5D01G514400 chr6D 81.959 1031 138 28 1226 2219 469395811 469394792 0.000000e+00 830
26 TraesCS5D01G514400 chr6B 81.214 1038 132 33 1235 2221 715632059 715631034 0.000000e+00 778
27 TraesCS5D01G514400 chr6B 85.787 197 22 5 1018 1209 715633222 715633027 1.510000e-48 204


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G514400 chr5D 538097945 538101154 3209 True 5928.000000 5928 100.000000 1 3210 1 chr5D.!!$R2 3209
1 TraesCS5D01G514400 chr5B 678576726 678581503 4777 True 1080.666667 2209 96.392333 1088 3210 3 chr5B.!!$R2 2122
2 TraesCS5D01G514400 chr5B 678651971 678652627 656 False 1037.000000 1037 95.159000 1838 2495 1 chr5B.!!$F1 657
3 TraesCS5D01G514400 chr5B 678688090 678688729 639 False 933.000000 933 92.738000 1838 2495 1 chr5B.!!$F2 657
4 TraesCS5D01G514400 chr5B 678592267 678596259 3992 True 361.500000 462 91.937500 904 2551 2 chr5B.!!$R3 1647
5 TraesCS5D01G514400 chr5B 678696360 678696892 532 False 320.000000 512 93.226500 2708 3210 2 chr5B.!!$F3 502
6 TraesCS5D01G514400 chr4A 632237672 632239001 1329 True 682.000000 1683 94.500667 1895 3210 3 chr4A.!!$R1 1315
7 TraesCS5D01G514400 chr7B 612846182 612846800 618 True 1000.000000 1000 95.806000 22 641 1 chr7B.!!$R1 619
8 TraesCS5D01G514400 chr6A 16369324 16369939 615 False 1000.000000 1000 95.942000 19 634 1 chr6A.!!$F1 615
9 TraesCS5D01G514400 chr6A 614523645 614524678 1033 True 789.000000 789 81.208000 1226 2221 1 chr6A.!!$R1 995
10 TraesCS5D01G514400 chr3B 757923919 757924526 607 True 994.000000 994 96.078000 22 633 1 chr3B.!!$R2 611
11 TraesCS5D01G514400 chr3B 606573411 606574020 609 True 979.000000 979 95.603000 22 634 1 chr3B.!!$R1 612
12 TraesCS5D01G514400 chr1B 59471832 59472448 616 False 990.000000 990 95.624000 19 635 1 chr1B.!!$F1 616
13 TraesCS5D01G514400 chr1D 431819992 431820607 615 False 989.000000 989 95.624000 19 635 1 chr1D.!!$F1 616
14 TraesCS5D01G514400 chr1A 539735831 539736444 613 True 968.000000 968 95.122000 22 635 1 chr1A.!!$R1 613
15 TraesCS5D01G514400 chrUn 55739436 55740047 611 True 959.000000 959 94.943000 22 634 1 chrUn.!!$R1 612
16 TraesCS5D01G514400 chr2B 67328499 67329110 611 True 953.000000 953 94.780000 22 634 1 chr2B.!!$R1 612
17 TraesCS5D01G514400 chr6D 469394792 469395811 1019 True 830.000000 830 81.959000 1226 2219 1 chr6D.!!$R1 993
18 TraesCS5D01G514400 chr6B 715631034 715633222 2188 True 491.000000 778 83.500500 1018 2221 2 chr6B.!!$R1 1203

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
724 726 0.03254 CCTTTCAGGTTGTTGCAGCC 59.967 55.0 0.0 0.0 34.9 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2572 7459 0.460311 CCTCAAAGACTATCGCCGGT 59.54 55.0 1.9 0.0 0.0 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 5.291178 CGTATCCGATATCGATACTCCTCT 58.709 45.833 26.32 1.17 43.02 3.69
587 589 9.880064 TTTTGAAAATGACGAATTTACGTATCA 57.120 25.926 0.00 0.00 46.52 2.15
621 623 5.295292 CGATACTGATACCCGTATCCGTATT 59.705 44.000 22.30 12.76 44.98 1.89
626 628 1.488390 ACCCGTATCCGTATTGGTGT 58.512 50.000 0.00 0.00 39.52 4.16
635 637 4.987408 TCCGTATTGGTGTATTCGAGAA 57.013 40.909 0.00 0.00 39.52 2.87
637 639 5.909477 TCCGTATTGGTGTATTCGAGAATT 58.091 37.500 3.49 0.00 39.52 2.17
638 640 5.981315 TCCGTATTGGTGTATTCGAGAATTC 59.019 40.000 3.49 0.00 39.52 2.17
639 641 5.983720 CCGTATTGGTGTATTCGAGAATTCT 59.016 40.000 7.95 7.95 32.50 2.40
640 642 6.144080 CCGTATTGGTGTATTCGAGAATTCTC 59.856 42.308 23.20 23.20 39.55 2.87
654 656 5.956642 GAGAATTCTCGTTGTTCCTCTAGT 58.043 41.667 19.31 0.00 32.78 2.57
655 657 6.347859 AGAATTCTCGTTGTTCCTCTAGTT 57.652 37.500 0.88 0.00 0.00 2.24
656 658 6.760291 AGAATTCTCGTTGTTCCTCTAGTTT 58.240 36.000 0.88 0.00 0.00 2.66
657 659 7.217906 AGAATTCTCGTTGTTCCTCTAGTTTT 58.782 34.615 0.88 0.00 0.00 2.43
658 660 7.715686 AGAATTCTCGTTGTTCCTCTAGTTTTT 59.284 33.333 0.88 0.00 0.00 1.94
680 682 6.560253 TTTCTTGTTGCAGATAACTCTTCC 57.440 37.500 0.00 0.00 0.00 3.46
681 683 4.245660 TCTTGTTGCAGATAACTCTTCCG 58.754 43.478 0.00 0.00 0.00 4.30
682 684 3.953712 TGTTGCAGATAACTCTTCCGA 57.046 42.857 0.00 0.00 0.00 4.55
683 685 3.585862 TGTTGCAGATAACTCTTCCGAC 58.414 45.455 0.00 0.00 0.00 4.79
684 686 3.258372 TGTTGCAGATAACTCTTCCGACT 59.742 43.478 0.00 0.00 0.00 4.18
685 687 4.246458 GTTGCAGATAACTCTTCCGACTT 58.754 43.478 0.00 0.00 0.00 3.01
686 688 4.537135 TGCAGATAACTCTTCCGACTTT 57.463 40.909 0.00 0.00 0.00 2.66
687 689 4.245660 TGCAGATAACTCTTCCGACTTTG 58.754 43.478 0.00 0.00 0.00 2.77
688 690 3.062774 GCAGATAACTCTTCCGACTTTGC 59.937 47.826 0.00 0.00 0.00 3.68
689 691 3.304559 CAGATAACTCTTCCGACTTTGCG 59.695 47.826 0.00 0.00 0.00 4.85
690 692 2.806608 TAACTCTTCCGACTTTGCGT 57.193 45.000 0.00 0.00 0.00 5.24
691 693 1.217882 AACTCTTCCGACTTTGCGTG 58.782 50.000 0.00 0.00 0.00 5.34
692 694 0.104304 ACTCTTCCGACTTTGCGTGT 59.896 50.000 0.00 0.00 0.00 4.49
693 695 0.784778 CTCTTCCGACTTTGCGTGTC 59.215 55.000 0.00 0.00 0.00 3.67
694 696 0.103390 TCTTCCGACTTTGCGTGTCA 59.897 50.000 4.82 0.00 34.37 3.58
695 697 0.934496 CTTCCGACTTTGCGTGTCAA 59.066 50.000 4.82 0.00 34.37 3.18
696 698 0.934496 TTCCGACTTTGCGTGTCAAG 59.066 50.000 4.82 0.00 35.84 3.02
697 699 0.878523 TCCGACTTTGCGTGTCAAGG 60.879 55.000 4.82 0.00 37.73 3.61
698 700 0.878523 CCGACTTTGCGTGTCAAGGA 60.879 55.000 4.82 0.00 35.55 3.36
699 701 0.934496 CGACTTTGCGTGTCAAGGAA 59.066 50.000 4.82 0.00 35.55 3.36
700 702 1.329292 CGACTTTGCGTGTCAAGGAAA 59.671 47.619 5.43 5.43 35.55 3.13
701 703 2.223157 CGACTTTGCGTGTCAAGGAAAA 60.223 45.455 6.87 0.00 35.55 2.29
702 704 3.363178 GACTTTGCGTGTCAAGGAAAAG 58.637 45.455 6.87 5.70 41.00 2.27
703 705 2.752903 ACTTTGCGTGTCAAGGAAAAGT 59.247 40.909 6.87 6.25 42.62 2.66
704 706 2.842208 TTGCGTGTCAAGGAAAAGTG 57.158 45.000 0.00 0.00 0.00 3.16
705 707 0.380378 TGCGTGTCAAGGAAAAGTGC 59.620 50.000 0.00 0.00 0.00 4.40
706 708 0.317854 GCGTGTCAAGGAAAAGTGCC 60.318 55.000 0.00 0.00 0.00 5.01
707 709 1.308998 CGTGTCAAGGAAAAGTGCCT 58.691 50.000 0.00 0.00 37.35 4.75
708 710 1.676006 CGTGTCAAGGAAAAGTGCCTT 59.324 47.619 0.00 0.00 46.36 4.35
709 711 2.099098 CGTGTCAAGGAAAAGTGCCTTT 59.901 45.455 0.00 0.00 42.99 3.11
710 712 3.706698 GTGTCAAGGAAAAGTGCCTTTC 58.293 45.455 0.00 0.00 42.99 2.62
711 713 3.130340 GTGTCAAGGAAAAGTGCCTTTCA 59.870 43.478 0.00 0.00 42.99 2.69
712 714 3.381272 TGTCAAGGAAAAGTGCCTTTCAG 59.619 43.478 0.00 0.00 42.99 3.02
713 715 2.958355 TCAAGGAAAAGTGCCTTTCAGG 59.042 45.455 0.00 0.00 42.99 3.86
714 716 2.695147 CAAGGAAAAGTGCCTTTCAGGT 59.305 45.455 0.00 0.00 42.99 4.00
715 717 3.032265 AGGAAAAGTGCCTTTCAGGTT 57.968 42.857 1.37 0.00 37.80 3.50
716 718 2.695147 AGGAAAAGTGCCTTTCAGGTTG 59.305 45.455 1.37 0.00 37.80 3.77
717 719 2.430694 GGAAAAGTGCCTTTCAGGTTGT 59.569 45.455 1.37 0.00 37.80 3.32
718 720 3.118775 GGAAAAGTGCCTTTCAGGTTGTT 60.119 43.478 1.37 0.00 37.80 2.83
719 721 3.525268 AAAGTGCCTTTCAGGTTGTTG 57.475 42.857 0.00 0.00 37.80 3.33
720 722 0.746659 AGTGCCTTTCAGGTTGTTGC 59.253 50.000 0.00 0.00 37.80 4.17
721 723 0.459489 GTGCCTTTCAGGTTGTTGCA 59.541 50.000 0.00 0.00 37.80 4.08
722 724 0.746063 TGCCTTTCAGGTTGTTGCAG 59.254 50.000 0.00 0.00 37.80 4.41
723 725 0.598419 GCCTTTCAGGTTGTTGCAGC 60.598 55.000 0.00 0.00 37.80 5.25
724 726 0.032540 CCTTTCAGGTTGTTGCAGCC 59.967 55.000 0.00 0.00 34.90 4.85
725 727 0.318107 CTTTCAGGTTGTTGCAGCCG 60.318 55.000 0.00 0.00 39.74 5.52
726 728 1.034838 TTTCAGGTTGTTGCAGCCGT 61.035 50.000 0.00 0.00 39.74 5.68
727 729 1.723608 TTCAGGTTGTTGCAGCCGTG 61.724 55.000 0.00 0.00 39.74 4.94
728 730 2.186160 CAGGTTGTTGCAGCCGTGA 61.186 57.895 0.00 0.00 39.74 4.35
729 731 1.453015 AGGTTGTTGCAGCCGTGAA 60.453 52.632 0.00 0.00 39.74 3.18
730 732 0.823356 AGGTTGTTGCAGCCGTGAAT 60.823 50.000 0.00 0.00 39.74 2.57
731 733 0.878416 GGTTGTTGCAGCCGTGAATA 59.122 50.000 0.00 0.00 0.00 1.75
732 734 1.401018 GGTTGTTGCAGCCGTGAATAC 60.401 52.381 0.00 0.00 0.00 1.89
733 735 1.265635 GTTGTTGCAGCCGTGAATACA 59.734 47.619 0.00 0.00 0.00 2.29
734 736 1.155889 TGTTGCAGCCGTGAATACAG 58.844 50.000 0.00 0.00 0.00 2.74
735 737 1.270571 TGTTGCAGCCGTGAATACAGA 60.271 47.619 0.00 0.00 0.00 3.41
736 738 1.804151 GTTGCAGCCGTGAATACAGAA 59.196 47.619 0.00 0.00 0.00 3.02
737 739 2.177394 TGCAGCCGTGAATACAGAAA 57.823 45.000 0.00 0.00 0.00 2.52
738 740 2.499197 TGCAGCCGTGAATACAGAAAA 58.501 42.857 0.00 0.00 0.00 2.29
739 741 2.881513 TGCAGCCGTGAATACAGAAAAA 59.118 40.909 0.00 0.00 0.00 1.94
740 742 3.058293 TGCAGCCGTGAATACAGAAAAAG 60.058 43.478 0.00 0.00 0.00 2.27
741 743 3.188460 GCAGCCGTGAATACAGAAAAAGA 59.812 43.478 0.00 0.00 0.00 2.52
742 744 4.142600 GCAGCCGTGAATACAGAAAAAGAT 60.143 41.667 0.00 0.00 0.00 2.40
743 745 5.563842 CAGCCGTGAATACAGAAAAAGATC 58.436 41.667 0.00 0.00 0.00 2.75
744 746 5.122239 CAGCCGTGAATACAGAAAAAGATCA 59.878 40.000 0.00 0.00 0.00 2.92
745 747 5.705441 AGCCGTGAATACAGAAAAAGATCAA 59.295 36.000 0.00 0.00 0.00 2.57
746 748 5.795441 GCCGTGAATACAGAAAAAGATCAAC 59.205 40.000 0.00 0.00 0.00 3.18
747 749 6.348540 GCCGTGAATACAGAAAAAGATCAACT 60.349 38.462 0.00 0.00 0.00 3.16
748 750 7.148474 GCCGTGAATACAGAAAAAGATCAACTA 60.148 37.037 0.00 0.00 0.00 2.24
749 751 8.169268 CCGTGAATACAGAAAAAGATCAACTAC 58.831 37.037 0.00 0.00 0.00 2.73
750 752 7.893236 CGTGAATACAGAAAAAGATCAACTACG 59.107 37.037 0.00 0.00 0.00 3.51
751 753 8.169268 GTGAATACAGAAAAAGATCAACTACGG 58.831 37.037 0.00 0.00 0.00 4.02
752 754 7.876068 TGAATACAGAAAAAGATCAACTACGGT 59.124 33.333 0.00 0.00 0.00 4.83
753 755 8.617290 AATACAGAAAAAGATCAACTACGGTT 57.383 30.769 0.00 0.00 35.86 4.44
754 756 6.541111 ACAGAAAAAGATCAACTACGGTTC 57.459 37.500 0.00 0.00 32.73 3.62
755 757 6.289064 ACAGAAAAAGATCAACTACGGTTCT 58.711 36.000 0.00 0.00 32.73 3.01
756 758 6.424207 ACAGAAAAAGATCAACTACGGTTCTC 59.576 38.462 0.00 0.00 32.73 2.87
757 759 5.634020 AGAAAAAGATCAACTACGGTTCTCG 59.366 40.000 0.00 0.00 45.88 4.04
758 760 4.778534 AAAGATCAACTACGGTTCTCGA 57.221 40.909 0.00 0.00 42.43 4.04
759 761 4.985538 AAGATCAACTACGGTTCTCGAT 57.014 40.909 0.00 0.00 42.43 3.59
760 762 4.294416 AGATCAACTACGGTTCTCGATG 57.706 45.455 0.00 0.00 42.43 3.84
761 763 3.695060 AGATCAACTACGGTTCTCGATGT 59.305 43.478 0.00 0.00 42.43 3.06
762 764 4.880120 AGATCAACTACGGTTCTCGATGTA 59.120 41.667 0.00 0.00 42.43 2.29
763 765 5.531659 AGATCAACTACGGTTCTCGATGTAT 59.468 40.000 0.00 0.00 42.43 2.29
764 766 5.571784 TCAACTACGGTTCTCGATGTATT 57.428 39.130 0.00 0.00 42.43 1.89
765 767 6.682423 TCAACTACGGTTCTCGATGTATTA 57.318 37.500 0.00 0.00 42.43 0.98
766 768 7.268199 TCAACTACGGTTCTCGATGTATTAT 57.732 36.000 0.00 0.00 42.43 1.28
767 769 8.382030 TCAACTACGGTTCTCGATGTATTATA 57.618 34.615 0.00 0.00 42.43 0.98
768 770 9.006839 TCAACTACGGTTCTCGATGTATTATAT 57.993 33.333 0.00 0.00 42.43 0.86
769 771 9.062674 CAACTACGGTTCTCGATGTATTATATG 57.937 37.037 0.00 0.00 42.43 1.78
770 772 7.249147 ACTACGGTTCTCGATGTATTATATGC 58.751 38.462 0.00 0.00 42.43 3.14
771 773 6.268825 ACGGTTCTCGATGTATTATATGCT 57.731 37.500 0.00 0.00 42.43 3.79
772 774 6.688578 ACGGTTCTCGATGTATTATATGCTT 58.311 36.000 0.00 0.00 42.43 3.91
773 775 7.823665 ACGGTTCTCGATGTATTATATGCTTA 58.176 34.615 0.00 0.00 42.43 3.09
774 776 7.754027 ACGGTTCTCGATGTATTATATGCTTAC 59.246 37.037 0.00 0.00 42.43 2.34
775 777 7.220300 CGGTTCTCGATGTATTATATGCTTACC 59.780 40.741 0.00 0.00 42.43 2.85
776 778 8.251721 GGTTCTCGATGTATTATATGCTTACCT 58.748 37.037 0.00 0.00 0.00 3.08
777 779 9.640963 GTTCTCGATGTATTATATGCTTACCTT 57.359 33.333 0.00 0.00 0.00 3.50
781 783 9.990360 TCGATGTATTATATGCTTACCTTTTGA 57.010 29.630 0.00 0.00 0.00 2.69
785 787 9.688091 TGTATTATATGCTTACCTTTTGAACCA 57.312 29.630 0.00 0.00 0.00 3.67
787 789 7.639113 TTATATGCTTACCTTTTGAACCAGG 57.361 36.000 0.00 0.00 36.10 4.45
788 790 3.586470 TGCTTACCTTTTGAACCAGGA 57.414 42.857 0.00 0.00 33.90 3.86
789 791 3.904717 TGCTTACCTTTTGAACCAGGAA 58.095 40.909 0.00 0.00 33.90 3.36
790 792 4.479158 TGCTTACCTTTTGAACCAGGAAT 58.521 39.130 0.00 0.00 33.90 3.01
791 793 4.280677 TGCTTACCTTTTGAACCAGGAATG 59.719 41.667 0.00 0.00 33.90 2.67
792 794 4.280929 GCTTACCTTTTGAACCAGGAATGT 59.719 41.667 0.00 0.00 33.90 2.71
793 795 5.475564 GCTTACCTTTTGAACCAGGAATGTA 59.524 40.000 0.00 0.00 33.90 2.29
794 796 6.349363 GCTTACCTTTTGAACCAGGAATGTAG 60.349 42.308 0.00 0.00 33.90 2.74
795 797 3.826729 ACCTTTTGAACCAGGAATGTAGC 59.173 43.478 0.00 0.00 33.90 3.58
796 798 3.826157 CCTTTTGAACCAGGAATGTAGCA 59.174 43.478 0.00 0.00 30.81 3.49
797 799 4.280677 CCTTTTGAACCAGGAATGTAGCAA 59.719 41.667 0.00 0.00 30.81 3.91
798 800 5.452078 TTTTGAACCAGGAATGTAGCAAG 57.548 39.130 0.00 0.00 0.00 4.01
799 801 4.365514 TTGAACCAGGAATGTAGCAAGA 57.634 40.909 0.00 0.00 0.00 3.02
800 802 4.574674 TGAACCAGGAATGTAGCAAGAT 57.425 40.909 0.00 0.00 0.00 2.40
801 803 4.922206 TGAACCAGGAATGTAGCAAGATT 58.078 39.130 0.00 0.00 0.00 2.40
802 804 4.701651 TGAACCAGGAATGTAGCAAGATTG 59.298 41.667 0.00 0.00 0.00 2.67
803 805 4.574674 ACCAGGAATGTAGCAAGATTGA 57.425 40.909 0.00 0.00 0.00 2.57
804 806 4.521146 ACCAGGAATGTAGCAAGATTGAG 58.479 43.478 0.00 0.00 0.00 3.02
805 807 4.018960 ACCAGGAATGTAGCAAGATTGAGT 60.019 41.667 0.00 0.00 0.00 3.41
806 808 4.334759 CCAGGAATGTAGCAAGATTGAGTG 59.665 45.833 0.00 0.00 0.00 3.51
807 809 4.940046 CAGGAATGTAGCAAGATTGAGTGT 59.060 41.667 0.00 0.00 0.00 3.55
808 810 5.064452 CAGGAATGTAGCAAGATTGAGTGTC 59.936 44.000 0.00 0.00 0.00 3.67
809 811 4.937620 GGAATGTAGCAAGATTGAGTGTCA 59.062 41.667 0.00 0.00 0.00 3.58
810 812 5.412594 GGAATGTAGCAAGATTGAGTGTCAA 59.587 40.000 0.00 0.00 41.09 3.18
811 813 6.072508 GGAATGTAGCAAGATTGAGTGTCAAA 60.073 38.462 0.00 0.00 40.12 2.69
812 814 7.362401 GGAATGTAGCAAGATTGAGTGTCAAAT 60.362 37.037 0.00 0.00 40.12 2.32
813 815 6.245115 TGTAGCAAGATTGAGTGTCAAATG 57.755 37.500 0.00 0.00 40.12 2.32
814 816 5.764686 TGTAGCAAGATTGAGTGTCAAATGT 59.235 36.000 0.00 0.00 40.12 2.71
815 817 5.368256 AGCAAGATTGAGTGTCAAATGTC 57.632 39.130 0.00 0.00 40.12 3.06
816 818 4.823442 AGCAAGATTGAGTGTCAAATGTCA 59.177 37.500 0.00 0.00 40.12 3.58
817 819 5.475909 AGCAAGATTGAGTGTCAAATGTCAT 59.524 36.000 0.00 0.00 40.12 3.06
818 820 5.571741 GCAAGATTGAGTGTCAAATGTCATG 59.428 40.000 0.00 0.00 40.12 3.07
819 821 6.569035 GCAAGATTGAGTGTCAAATGTCATGA 60.569 38.462 0.00 0.00 40.12 3.07
820 822 6.492007 AGATTGAGTGTCAAATGTCATGAC 57.508 37.500 19.27 19.27 45.82 3.06
821 823 6.236409 AGATTGAGTGTCAAATGTCATGACT 58.764 36.000 25.55 9.43 45.81 3.41
822 824 7.389232 AGATTGAGTGTCAAATGTCATGACTA 58.611 34.615 25.55 13.07 45.81 2.59
823 825 8.045507 AGATTGAGTGTCAAATGTCATGACTAT 58.954 33.333 25.55 14.66 45.81 2.12
824 826 9.317936 GATTGAGTGTCAAATGTCATGACTATA 57.682 33.333 25.55 7.12 45.81 1.31
825 827 8.707938 TTGAGTGTCAAATGTCATGACTATAG 57.292 34.615 25.55 13.56 45.81 1.31
826 828 7.840931 TGAGTGTCAAATGTCATGACTATAGT 58.159 34.615 25.55 4.68 45.81 2.12
827 829 7.761249 TGAGTGTCAAATGTCATGACTATAGTG 59.239 37.037 25.55 15.71 45.81 2.74
828 830 7.615403 AGTGTCAAATGTCATGACTATAGTGT 58.385 34.615 25.55 0.00 45.81 3.55
829 831 8.097038 AGTGTCAAATGTCATGACTATAGTGTT 58.903 33.333 25.55 7.12 45.81 3.32
830 832 9.366216 GTGTCAAATGTCATGACTATAGTGTTA 57.634 33.333 25.55 3.32 45.81 2.41
831 833 9.586435 TGTCAAATGTCATGACTATAGTGTTAG 57.414 33.333 25.55 5.97 45.81 2.34
832 834 9.587772 GTCAAATGTCATGACTATAGTGTTAGT 57.412 33.333 25.55 0.00 43.03 2.24
836 838 8.762481 ATGTCATGACTATAGTGTTAGTACCA 57.238 34.615 25.55 0.00 32.59 3.25
837 839 8.221965 TGTCATGACTATAGTGTTAGTACCAG 57.778 38.462 25.55 0.00 32.59 4.00
838 840 7.140048 GTCATGACTATAGTGTTAGTACCAGC 58.860 42.308 18.83 0.00 32.59 4.85
839 841 6.264744 TCATGACTATAGTGTTAGTACCAGCC 59.735 42.308 10.90 0.00 32.59 4.85
840 842 5.512298 TGACTATAGTGTTAGTACCAGCCA 58.488 41.667 10.90 0.00 32.59 4.75
841 843 5.953548 TGACTATAGTGTTAGTACCAGCCAA 59.046 40.000 10.90 0.00 32.59 4.52
842 844 6.127535 TGACTATAGTGTTAGTACCAGCCAAC 60.128 42.308 10.90 0.00 32.59 3.77
843 845 5.956563 ACTATAGTGTTAGTACCAGCCAACT 59.043 40.000 4.10 0.00 30.65 3.16
844 846 3.679824 AGTGTTAGTACCAGCCAACTC 57.320 47.619 0.00 0.00 0.00 3.01
845 847 2.969950 AGTGTTAGTACCAGCCAACTCA 59.030 45.455 0.00 0.00 0.00 3.41
846 848 3.389983 AGTGTTAGTACCAGCCAACTCAA 59.610 43.478 0.00 0.00 0.00 3.02
847 849 4.131596 GTGTTAGTACCAGCCAACTCAAA 58.868 43.478 0.00 0.00 0.00 2.69
848 850 4.024302 GTGTTAGTACCAGCCAACTCAAAC 60.024 45.833 0.00 0.00 0.00 2.93
849 851 4.131596 GTTAGTACCAGCCAACTCAAACA 58.868 43.478 0.00 0.00 0.00 2.83
850 852 3.290948 AGTACCAGCCAACTCAAACAA 57.709 42.857 0.00 0.00 0.00 2.83
851 853 3.832527 AGTACCAGCCAACTCAAACAAT 58.167 40.909 0.00 0.00 0.00 2.71
852 854 4.980573 AGTACCAGCCAACTCAAACAATA 58.019 39.130 0.00 0.00 0.00 1.90
853 855 5.570320 AGTACCAGCCAACTCAAACAATAT 58.430 37.500 0.00 0.00 0.00 1.28
854 856 6.717289 AGTACCAGCCAACTCAAACAATATA 58.283 36.000 0.00 0.00 0.00 0.86
855 857 6.823689 AGTACCAGCCAACTCAAACAATATAG 59.176 38.462 0.00 0.00 0.00 1.31
856 858 5.570320 ACCAGCCAACTCAAACAATATAGT 58.430 37.500 0.00 0.00 0.00 2.12
857 859 5.415701 ACCAGCCAACTCAAACAATATAGTG 59.584 40.000 0.00 0.00 0.00 2.74
858 860 5.647658 CCAGCCAACTCAAACAATATAGTGA 59.352 40.000 7.27 0.00 0.00 3.41
859 861 6.150976 CCAGCCAACTCAAACAATATAGTGAA 59.849 38.462 7.27 0.00 0.00 3.18
860 862 7.309133 CCAGCCAACTCAAACAATATAGTGAAA 60.309 37.037 7.27 0.00 0.00 2.69
861 863 7.538678 CAGCCAACTCAAACAATATAGTGAAAC 59.461 37.037 7.27 0.00 0.00 2.78
862 864 6.806739 GCCAACTCAAACAATATAGTGAAACC 59.193 38.462 7.27 0.00 37.80 3.27
863 865 7.523052 GCCAACTCAAACAATATAGTGAAACCA 60.523 37.037 7.27 0.00 37.80 3.67
864 866 8.522830 CCAACTCAAACAATATAGTGAAACCAT 58.477 33.333 7.27 0.00 37.80 3.55
865 867 9.345517 CAACTCAAACAATATAGTGAAACCATG 57.654 33.333 7.27 0.00 37.80 3.66
866 868 8.055279 ACTCAAACAATATAGTGAAACCATGG 57.945 34.615 11.19 11.19 37.80 3.66
867 869 7.888021 ACTCAAACAATATAGTGAAACCATGGA 59.112 33.333 21.47 0.00 37.80 3.41
868 870 8.279970 TCAAACAATATAGTGAAACCATGGAG 57.720 34.615 21.47 0.00 37.80 3.86
869 871 7.888021 TCAAACAATATAGTGAAACCATGGAGT 59.112 33.333 21.47 4.98 37.80 3.85
870 872 7.630242 AACAATATAGTGAAACCATGGAGTG 57.370 36.000 21.47 4.36 37.80 3.51
871 873 6.957631 ACAATATAGTGAAACCATGGAGTGA 58.042 36.000 21.47 0.00 37.80 3.41
872 874 7.402054 ACAATATAGTGAAACCATGGAGTGAA 58.598 34.615 21.47 0.00 37.80 3.18
873 875 7.888021 ACAATATAGTGAAACCATGGAGTGAAA 59.112 33.333 21.47 0.00 37.80 2.69
874 876 7.865706 ATATAGTGAAACCATGGAGTGAAAC 57.134 36.000 21.47 8.71 37.80 2.78
875 877 3.897239 AGTGAAACCATGGAGTGAAACA 58.103 40.909 21.47 5.66 36.85 2.83
876 878 4.473444 AGTGAAACCATGGAGTGAAACAT 58.527 39.130 21.47 0.00 36.85 2.71
877 879 5.630121 AGTGAAACCATGGAGTGAAACATA 58.370 37.500 21.47 0.00 36.85 2.29
878 880 6.248433 AGTGAAACCATGGAGTGAAACATAT 58.752 36.000 21.47 0.00 36.85 1.78
879 881 6.151648 AGTGAAACCATGGAGTGAAACATATG 59.848 38.462 21.47 0.00 36.85 1.78
880 882 4.989279 AACCATGGAGTGAAACATATGC 57.011 40.909 21.47 0.00 41.43 3.14
881 883 4.240881 ACCATGGAGTGAAACATATGCT 57.759 40.909 21.47 0.00 41.43 3.79
882 884 4.202441 ACCATGGAGTGAAACATATGCTC 58.798 43.478 21.47 0.70 41.43 4.26
883 885 4.201657 CCATGGAGTGAAACATATGCTCA 58.798 43.478 5.56 3.26 41.43 4.26
884 886 4.036027 CCATGGAGTGAAACATATGCTCAC 59.964 45.833 22.34 22.34 41.43 3.51
885 887 3.609853 TGGAGTGAAACATATGCTCACC 58.390 45.455 24.56 18.49 40.29 4.02
886 888 3.008923 TGGAGTGAAACATATGCTCACCA 59.991 43.478 24.56 17.83 40.29 4.17
887 889 4.009675 GGAGTGAAACATATGCTCACCAA 58.990 43.478 24.56 0.00 40.29 3.67
888 890 4.095483 GGAGTGAAACATATGCTCACCAAG 59.905 45.833 24.56 0.00 40.29 3.61
889 891 4.012374 AGTGAAACATATGCTCACCAAGG 58.988 43.478 24.56 0.00 40.29 3.61
890 892 3.758554 GTGAAACATATGCTCACCAAGGT 59.241 43.478 20.46 0.00 34.63 3.50
891 893 4.218417 GTGAAACATATGCTCACCAAGGTT 59.782 41.667 20.46 0.00 34.63 3.50
892 894 4.832266 TGAAACATATGCTCACCAAGGTTT 59.168 37.500 1.58 0.00 31.82 3.27
893 895 5.304101 TGAAACATATGCTCACCAAGGTTTT 59.696 36.000 1.58 0.00 30.37 2.43
894 896 6.491745 TGAAACATATGCTCACCAAGGTTTTA 59.508 34.615 1.58 0.00 30.37 1.52
895 897 6.515272 AACATATGCTCACCAAGGTTTTAG 57.485 37.500 1.58 0.00 0.00 1.85
896 898 5.815581 ACATATGCTCACCAAGGTTTTAGA 58.184 37.500 1.58 0.00 0.00 2.10
897 899 5.648092 ACATATGCTCACCAAGGTTTTAGAC 59.352 40.000 1.58 0.00 0.00 2.59
898 900 3.569194 TGCTCACCAAGGTTTTAGACA 57.431 42.857 0.00 0.00 0.00 3.41
899 901 3.892284 TGCTCACCAAGGTTTTAGACAA 58.108 40.909 0.00 0.00 0.00 3.18
900 902 3.882888 TGCTCACCAAGGTTTTAGACAAG 59.117 43.478 0.00 0.00 0.00 3.16
901 903 3.883489 GCTCACCAAGGTTTTAGACAAGT 59.117 43.478 0.00 0.00 0.00 3.16
902 904 4.338400 GCTCACCAAGGTTTTAGACAAGTT 59.662 41.667 0.00 0.00 0.00 2.66
903 905 5.733373 GCTCACCAAGGTTTTAGACAAGTTG 60.733 44.000 0.00 0.00 0.00 3.16
904 906 4.642885 TCACCAAGGTTTTAGACAAGTTGG 59.357 41.667 7.96 0.00 39.36 3.77
905 907 4.642885 CACCAAGGTTTTAGACAAGTTGGA 59.357 41.667 7.96 0.00 38.00 3.53
906 908 5.301805 CACCAAGGTTTTAGACAAGTTGGAT 59.698 40.000 7.96 0.00 38.00 3.41
907 909 5.301805 ACCAAGGTTTTAGACAAGTTGGATG 59.698 40.000 7.96 0.00 38.00 3.51
908 910 5.301805 CCAAGGTTTTAGACAAGTTGGATGT 59.698 40.000 7.96 0.00 37.34 3.06
909 911 6.488683 CCAAGGTTTTAGACAAGTTGGATGTA 59.511 38.462 7.96 0.00 37.34 2.29
910 912 7.308589 CCAAGGTTTTAGACAAGTTGGATGTAG 60.309 40.741 7.96 0.00 37.34 2.74
911 913 6.238648 AGGTTTTAGACAAGTTGGATGTAGG 58.761 40.000 7.96 0.00 0.00 3.18
912 914 5.106277 GGTTTTAGACAAGTTGGATGTAGGC 60.106 44.000 7.96 0.00 0.00 3.93
913 915 2.789409 AGACAAGTTGGATGTAGGCC 57.211 50.000 7.96 0.00 0.00 5.19
914 916 1.066143 AGACAAGTTGGATGTAGGCCG 60.066 52.381 7.96 0.00 0.00 6.13
915 917 0.690762 ACAAGTTGGATGTAGGCCGT 59.309 50.000 7.96 0.00 0.00 5.68
916 918 1.903860 ACAAGTTGGATGTAGGCCGTA 59.096 47.619 7.96 0.00 0.00 4.02
917 919 2.277084 CAAGTTGGATGTAGGCCGTAC 58.723 52.381 0.00 0.91 0.00 3.67
918 920 1.861982 AGTTGGATGTAGGCCGTACT 58.138 50.000 0.00 0.00 32.19 2.73
919 921 1.755380 AGTTGGATGTAGGCCGTACTC 59.245 52.381 0.00 0.00 32.19 2.59
920 922 1.755380 GTTGGATGTAGGCCGTACTCT 59.245 52.381 0.00 0.00 32.19 3.24
921 923 2.154567 TGGATGTAGGCCGTACTCTT 57.845 50.000 0.00 0.00 32.19 2.85
922 924 3.301794 TGGATGTAGGCCGTACTCTTA 57.698 47.619 0.00 0.00 32.19 2.10
923 925 3.220110 TGGATGTAGGCCGTACTCTTAG 58.780 50.000 0.00 0.00 32.19 2.18
924 926 3.117776 TGGATGTAGGCCGTACTCTTAGA 60.118 47.826 0.00 0.00 32.19 2.10
925 927 4.080687 GGATGTAGGCCGTACTCTTAGAT 58.919 47.826 0.00 0.00 32.19 1.98
926 928 4.523558 GGATGTAGGCCGTACTCTTAGATT 59.476 45.833 0.00 0.00 32.19 2.40
927 929 5.010820 GGATGTAGGCCGTACTCTTAGATTT 59.989 44.000 0.00 0.00 32.19 2.17
928 930 5.258456 TGTAGGCCGTACTCTTAGATTTG 57.742 43.478 0.00 0.00 32.19 2.32
929 931 4.951715 TGTAGGCCGTACTCTTAGATTTGA 59.048 41.667 0.00 0.00 32.19 2.69
930 932 4.657436 AGGCCGTACTCTTAGATTTGAG 57.343 45.455 0.00 0.00 36.47 3.02
931 933 4.024670 AGGCCGTACTCTTAGATTTGAGT 58.975 43.478 0.00 0.00 44.56 3.41
932 934 4.113354 GGCCGTACTCTTAGATTTGAGTG 58.887 47.826 5.97 0.00 42.67 3.51
933 935 4.381718 GGCCGTACTCTTAGATTTGAGTGT 60.382 45.833 5.97 0.00 42.67 3.55
934 936 5.169295 GCCGTACTCTTAGATTTGAGTGTT 58.831 41.667 5.97 0.00 42.67 3.32
935 937 5.288952 GCCGTACTCTTAGATTTGAGTGTTC 59.711 44.000 5.97 0.00 42.67 3.18
936 938 6.622549 CCGTACTCTTAGATTTGAGTGTTCT 58.377 40.000 5.97 0.00 42.67 3.01
937 939 6.748198 CCGTACTCTTAGATTTGAGTGTTCTC 59.252 42.308 5.97 0.00 42.67 2.87
938 940 7.362229 CCGTACTCTTAGATTTGAGTGTTCTCT 60.362 40.741 5.97 0.00 42.67 3.10
939 941 7.483375 CGTACTCTTAGATTTGAGTGTTCTCTG 59.517 40.741 5.97 0.00 42.67 3.35
940 942 6.162777 ACTCTTAGATTTGAGTGTTCTCTGC 58.837 40.000 0.00 0.00 41.40 4.26
941 943 6.014669 ACTCTTAGATTTGAGTGTTCTCTGCT 60.015 38.462 0.00 0.00 41.40 4.24
942 944 6.162079 TCTTAGATTTGAGTGTTCTCTGCTG 58.838 40.000 0.00 0.00 40.98 4.41
943 945 3.672808 AGATTTGAGTGTTCTCTGCTGG 58.327 45.455 0.00 0.00 40.98 4.85
944 946 3.326006 AGATTTGAGTGTTCTCTGCTGGA 59.674 43.478 0.00 0.00 40.98 3.86
945 947 2.827800 TTGAGTGTTCTCTGCTGGAG 57.172 50.000 0.00 0.00 43.12 3.86
946 948 1.709578 TGAGTGTTCTCTGCTGGAGT 58.290 50.000 0.00 0.00 42.40 3.85
947 949 2.876581 TGAGTGTTCTCTGCTGGAGTA 58.123 47.619 0.00 0.00 42.40 2.59
948 950 3.435275 TGAGTGTTCTCTGCTGGAGTAT 58.565 45.455 0.00 0.00 42.40 2.12
949 951 3.834813 TGAGTGTTCTCTGCTGGAGTATT 59.165 43.478 0.00 0.00 42.40 1.89
950 952 5.016831 TGAGTGTTCTCTGCTGGAGTATTA 58.983 41.667 0.00 0.00 42.40 0.98
951 953 5.105716 TGAGTGTTCTCTGCTGGAGTATTAC 60.106 44.000 0.00 0.00 42.40 1.89
952 954 5.020132 AGTGTTCTCTGCTGGAGTATTACT 58.980 41.667 0.00 0.00 42.40 2.24
953 955 5.482175 AGTGTTCTCTGCTGGAGTATTACTT 59.518 40.000 0.00 0.00 42.40 2.24
954 956 6.663953 AGTGTTCTCTGCTGGAGTATTACTTA 59.336 38.462 0.00 0.00 42.40 2.24
955 957 7.178628 AGTGTTCTCTGCTGGAGTATTACTTAA 59.821 37.037 0.00 0.00 42.40 1.85
956 958 7.489757 GTGTTCTCTGCTGGAGTATTACTTAAG 59.510 40.741 0.00 0.00 42.40 1.85
957 959 7.178628 TGTTCTCTGCTGGAGTATTACTTAAGT 59.821 37.037 13.68 13.68 42.40 2.24
958 960 7.101652 TCTCTGCTGGAGTATTACTTAAGTG 57.898 40.000 18.56 0.00 42.40 3.16
959 961 6.096987 TCTCTGCTGGAGTATTACTTAAGTGG 59.903 42.308 18.56 0.00 42.40 4.00
960 962 4.766375 TGCTGGAGTATTACTTAAGTGGC 58.234 43.478 18.56 5.55 0.00 5.01
961 963 4.469945 TGCTGGAGTATTACTTAAGTGGCT 59.530 41.667 18.56 10.00 0.00 4.75
962 964 5.051153 GCTGGAGTATTACTTAAGTGGCTC 58.949 45.833 18.56 16.80 0.00 4.70
963 965 5.258456 TGGAGTATTACTTAAGTGGCTCG 57.742 43.478 18.56 0.00 0.00 5.03
964 966 4.708421 TGGAGTATTACTTAAGTGGCTCGT 59.292 41.667 18.56 0.00 0.00 4.18
965 967 5.041940 GGAGTATTACTTAAGTGGCTCGTG 58.958 45.833 18.56 0.00 0.00 4.35
966 968 4.430908 AGTATTACTTAAGTGGCTCGTGC 58.569 43.478 18.56 0.00 38.76 5.34
967 969 2.823924 TTACTTAAGTGGCTCGTGCA 57.176 45.000 18.56 0.00 41.91 4.57
968 970 2.823924 TACTTAAGTGGCTCGTGCAA 57.176 45.000 18.56 0.00 41.91 4.08
969 971 2.185004 ACTTAAGTGGCTCGTGCAAT 57.815 45.000 7.48 0.00 41.91 3.56
970 972 1.806542 ACTTAAGTGGCTCGTGCAATG 59.193 47.619 7.48 0.00 41.91 2.82
971 973 2.076100 CTTAAGTGGCTCGTGCAATGA 58.924 47.619 12.07 0.00 41.91 2.57
972 974 2.177394 TAAGTGGCTCGTGCAATGAA 57.823 45.000 12.07 0.00 41.91 2.57
973 975 0.877071 AAGTGGCTCGTGCAATGAAG 59.123 50.000 12.07 0.00 41.91 3.02
974 976 0.250467 AGTGGCTCGTGCAATGAAGT 60.250 50.000 12.07 0.00 41.91 3.01
975 977 0.110056 GTGGCTCGTGCAATGAAGTG 60.110 55.000 12.07 0.00 41.91 3.16
976 978 0.250252 TGGCTCGTGCAATGAAGTGA 60.250 50.000 12.07 0.00 41.91 3.41
977 979 1.089920 GGCTCGTGCAATGAAGTGAT 58.910 50.000 12.07 0.00 41.91 3.06
978 980 1.202110 GGCTCGTGCAATGAAGTGATG 60.202 52.381 12.07 0.00 41.91 3.07
979 981 1.733912 GCTCGTGCAATGAAGTGATGA 59.266 47.619 4.26 0.00 39.41 2.92
980 982 2.353889 GCTCGTGCAATGAAGTGATGAT 59.646 45.455 4.26 0.00 39.41 2.45
981 983 3.787805 GCTCGTGCAATGAAGTGATGATG 60.788 47.826 4.26 0.00 39.41 3.07
982 984 2.679336 TCGTGCAATGAAGTGATGATGG 59.321 45.455 0.00 0.00 0.00 3.51
983 985 2.421073 CGTGCAATGAAGTGATGATGGT 59.579 45.455 0.00 0.00 0.00 3.55
984 986 3.622612 CGTGCAATGAAGTGATGATGGTA 59.377 43.478 0.00 0.00 0.00 3.25
985 987 4.274214 CGTGCAATGAAGTGATGATGGTAT 59.726 41.667 0.00 0.00 0.00 2.73
986 988 5.559608 CGTGCAATGAAGTGATGATGGTATC 60.560 44.000 0.00 0.00 0.00 2.24
987 989 5.530171 GTGCAATGAAGTGATGATGGTATCT 59.470 40.000 0.00 0.00 0.00 1.98
988 990 6.039047 GTGCAATGAAGTGATGATGGTATCTT 59.961 38.462 0.00 0.00 0.00 2.40
989 991 6.261603 TGCAATGAAGTGATGATGGTATCTTC 59.738 38.462 0.00 0.00 34.90 2.87
990 992 6.485984 GCAATGAAGTGATGATGGTATCTTCT 59.514 38.462 0.00 0.00 35.25 2.85
991 993 7.520131 GCAATGAAGTGATGATGGTATCTTCTG 60.520 40.741 0.00 0.00 35.25 3.02
992 994 5.922053 TGAAGTGATGATGGTATCTTCTGG 58.078 41.667 0.00 0.00 35.25 3.86
993 995 5.426509 TGAAGTGATGATGGTATCTTCTGGT 59.573 40.000 0.00 0.00 35.25 4.00
994 996 5.287674 AGTGATGATGGTATCTTCTGGTG 57.712 43.478 0.00 0.00 35.25 4.17
995 997 4.964897 AGTGATGATGGTATCTTCTGGTGA 59.035 41.667 0.00 0.00 35.25 4.02
996 998 5.605908 AGTGATGATGGTATCTTCTGGTGAT 59.394 40.000 0.00 0.00 35.25 3.06
997 999 5.931146 GTGATGATGGTATCTTCTGGTGATC 59.069 44.000 0.00 0.00 35.25 2.92
998 1000 4.590850 TGATGGTATCTTCTGGTGATCG 57.409 45.455 0.00 0.00 0.00 3.69
999 1001 2.890808 TGGTATCTTCTGGTGATCGC 57.109 50.000 0.00 0.00 0.00 4.58
1000 1002 2.107366 TGGTATCTTCTGGTGATCGCA 58.893 47.619 8.82 0.00 0.00 5.10
1001 1003 2.700371 TGGTATCTTCTGGTGATCGCAT 59.300 45.455 8.82 0.00 0.00 4.73
1002 1004 3.062763 GGTATCTTCTGGTGATCGCATG 58.937 50.000 8.82 0.00 0.00 4.06
1003 1005 2.251409 ATCTTCTGGTGATCGCATGG 57.749 50.000 8.82 0.00 0.00 3.66
1004 1006 1.194218 TCTTCTGGTGATCGCATGGA 58.806 50.000 8.82 0.01 0.00 3.41
1005 1007 1.554617 TCTTCTGGTGATCGCATGGAA 59.445 47.619 8.82 7.88 0.00 3.53
1006 1008 2.171237 TCTTCTGGTGATCGCATGGAAT 59.829 45.455 8.82 0.00 0.00 3.01
1007 1009 2.715749 TCTGGTGATCGCATGGAATT 57.284 45.000 8.82 0.00 0.00 2.17
1008 1010 2.564771 TCTGGTGATCGCATGGAATTC 58.435 47.619 8.82 0.00 0.00 2.17
1009 1011 2.093021 TCTGGTGATCGCATGGAATTCA 60.093 45.455 8.82 0.00 0.00 2.57
1010 1012 2.016318 TGGTGATCGCATGGAATTCAC 58.984 47.619 8.82 2.64 36.76 3.18
1011 1013 1.334869 GGTGATCGCATGGAATTCACC 59.665 52.381 8.82 15.35 46.71 4.02
1012 1014 1.003545 GTGATCGCATGGAATTCACCG 60.004 52.381 7.93 4.09 32.47 4.94
1013 1015 1.134551 TGATCGCATGGAATTCACCGA 60.135 47.619 7.93 9.23 37.05 4.69
1014 1016 2.146342 GATCGCATGGAATTCACCGAT 58.854 47.619 16.32 16.32 42.17 4.18
1015 1017 1.581934 TCGCATGGAATTCACCGATC 58.418 50.000 7.93 0.00 30.81 3.69
1016 1018 1.138859 TCGCATGGAATTCACCGATCT 59.861 47.619 7.93 0.00 30.81 2.75
1020 1022 3.242870 GCATGGAATTCACCGATCTGTTC 60.243 47.826 7.93 0.00 0.00 3.18
1027 1029 1.078759 CACCGATCTGTTCCTCGTGC 61.079 60.000 0.00 0.00 33.11 5.34
1065 1067 1.898574 CAGGCCTTTTGCGTCAGGT 60.899 57.895 0.00 0.00 42.61 4.00
1077 1079 1.258445 CGTCAGGTGCTCTAACCCCT 61.258 60.000 0.00 0.00 41.54 4.79
1083 1085 1.208293 GGTGCTCTAACCCCTTCTCAG 59.792 57.143 0.00 0.00 33.79 3.35
1125 1127 1.609783 GCTACTGCTGGGATTGGGT 59.390 57.895 0.00 0.00 36.03 4.51
1308 2256 8.324191 TCCACCTCTAATTTGTCTCATTATCT 57.676 34.615 0.00 0.00 0.00 1.98
1333 2281 3.047877 CGTGTTCTTGGGGCGTCC 61.048 66.667 0.00 0.00 0.00 4.79
1445 2399 4.220821 TCTTGTGTCCAGAGAGTAATCACC 59.779 45.833 0.00 0.00 0.00 4.02
1447 2401 3.511540 TGTGTCCAGAGAGTAATCACCTG 59.488 47.826 5.85 5.85 0.00 4.00
1561 2515 1.690893 GCCTAGATCCTGCTGTCATCA 59.309 52.381 0.00 0.00 0.00 3.07
1575 2529 4.800914 GCTGTCATCATCCCACTGTATACC 60.801 50.000 0.00 0.00 0.00 2.73
1744 2716 2.492484 AGTAGGAGTTAAGTCCACAGCG 59.508 50.000 27.45 0.00 39.34 5.18
1816 2788 2.237643 TCAATTGGCAGCTTTGCACTA 58.762 42.857 5.42 0.00 36.33 2.74
2134 3131 7.664082 AACTCATTGTGTTTCATCTCTACTG 57.336 36.000 0.00 0.00 0.00 2.74
2137 3134 3.660501 TGTGTTTCATCTCTACTGCGT 57.339 42.857 0.00 0.00 0.00 5.24
2269 3266 1.234821 TTTTTGTGGCTAGTGCGAGG 58.765 50.000 0.00 0.00 40.82 4.63
2409 3409 5.826643 AGGCAAACCCTGATGATAAGTTTA 58.173 37.500 0.00 0.00 44.28 2.01
2484 6006 4.218312 GGCTCCCAATGATAAACAAGGAT 58.782 43.478 0.00 0.00 32.02 3.24
2502 6024 4.091549 AGGATCCAGTGAAAATGCATTGT 58.908 39.130 13.82 7.41 0.00 2.71
2538 6060 8.190122 ACATTGTTGTGCATCGATGTAATTATT 58.810 29.630 25.47 4.11 37.04 1.40
2571 7458 2.037772 ACTCTCCATGACACAAGACCAC 59.962 50.000 0.00 0.00 0.00 4.16
2572 7459 2.037641 CTCTCCATGACACAAGACCACA 59.962 50.000 0.00 0.00 0.00 4.17
2573 7460 2.146342 CTCCATGACACAAGACCACAC 58.854 52.381 0.00 0.00 0.00 3.82
2574 7461 1.202758 TCCATGACACAAGACCACACC 60.203 52.381 0.00 0.00 0.00 4.16
2756 8965 8.721478 GTTCATGACACACTTGATTATGTTACT 58.279 33.333 0.00 0.00 33.71 2.24
2759 8968 7.806149 TGACACACTTGATTATGTTACTACG 57.194 36.000 0.00 0.00 0.00 3.51
2934 9157 0.304705 GTTGTGTGTGTTGAGAGCCG 59.695 55.000 0.00 0.00 0.00 5.52
2960 9183 2.711542 ACCGCCCTTATTCTGTTTGAG 58.288 47.619 0.00 0.00 0.00 3.02
2972 9195 6.705863 ATTCTGTTTGAGAAAAGAACAGCT 57.294 33.333 9.85 0.00 46.04 4.24
3086 9309 7.550906 GCTTATTCAGTTTCCAGATCTAAGTGT 59.449 37.037 10.11 0.00 0.00 3.55
3145 9540 7.166167 TCTTAAGATCTCCAGGTTTTTACCAC 58.834 38.462 0.00 0.00 0.00 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.828299 TTTGAAACGAGAAATCACCTTGT 57.172 34.783 0.00 0.00 0.00 3.16
2 3 5.221224 TGCATTTGAAACGAGAAATCACCTT 60.221 36.000 0.00 0.00 0.00 3.50
3 4 4.278170 TGCATTTGAAACGAGAAATCACCT 59.722 37.500 0.00 0.00 0.00 4.00
4 5 4.382754 GTGCATTTGAAACGAGAAATCACC 59.617 41.667 0.00 0.00 0.00 4.02
5 6 4.087085 CGTGCATTTGAAACGAGAAATCAC 59.913 41.667 0.00 0.00 39.64 3.06
6 7 4.218265 CGTGCATTTGAAACGAGAAATCA 58.782 39.130 0.00 0.00 39.64 2.57
7 8 3.603770 CCGTGCATTTGAAACGAGAAATC 59.396 43.478 0.00 0.00 39.64 2.17
8 9 3.252215 TCCGTGCATTTGAAACGAGAAAT 59.748 39.130 0.00 0.00 39.64 2.17
9 10 2.614520 TCCGTGCATTTGAAACGAGAAA 59.385 40.909 0.00 0.00 39.64 2.52
10 11 2.214347 TCCGTGCATTTGAAACGAGAA 58.786 42.857 0.00 0.00 39.64 2.87
11 12 1.872388 TCCGTGCATTTGAAACGAGA 58.128 45.000 0.00 2.39 39.64 4.04
12 13 2.900122 ATCCGTGCATTTGAAACGAG 57.100 45.000 0.00 0.59 39.64 4.18
13 14 3.331150 AGTATCCGTGCATTTGAAACGA 58.669 40.909 0.00 0.00 39.64 3.85
14 15 3.740044 AGTATCCGTGCATTTGAAACG 57.260 42.857 0.00 0.00 37.07 3.60
15 16 5.041951 TGAAGTATCCGTGCATTTGAAAC 57.958 39.130 0.00 0.00 0.00 2.78
16 17 4.379394 GCTGAAGTATCCGTGCATTTGAAA 60.379 41.667 0.00 0.00 0.00 2.69
17 18 3.126858 GCTGAAGTATCCGTGCATTTGAA 59.873 43.478 0.00 0.00 0.00 2.69
18 19 2.677836 GCTGAAGTATCCGTGCATTTGA 59.322 45.455 0.00 0.00 0.00 2.69
19 20 2.223340 GGCTGAAGTATCCGTGCATTTG 60.223 50.000 0.00 0.00 0.00 2.32
20 21 2.017049 GGCTGAAGTATCCGTGCATTT 58.983 47.619 0.00 0.00 0.00 2.32
88 89 2.275134 TACGTATCAGGGGCGTATCA 57.725 50.000 0.00 0.00 39.64 2.15
149 150 6.726490 ATTGGCGAAGTATCCTTAGAGTAA 57.274 37.500 0.00 0.00 0.00 2.24
503 505 5.299148 CAATCTGGAGGAGATGAGAATGAC 58.701 45.833 0.00 0.00 40.89 3.06
587 589 3.514309 GGTATCAGTATCGGGCCAATACT 59.486 47.826 19.32 19.32 39.87 2.12
655 657 7.425606 GGAAGAGTTATCTGCAACAAGAAAAA 58.574 34.615 0.00 0.00 35.37 1.94
656 658 6.293407 CGGAAGAGTTATCTGCAACAAGAAAA 60.293 38.462 0.00 0.00 35.37 2.29
657 659 5.179368 CGGAAGAGTTATCTGCAACAAGAAA 59.821 40.000 0.00 0.00 35.37 2.52
658 660 4.690748 CGGAAGAGTTATCTGCAACAAGAA 59.309 41.667 0.00 0.00 35.37 2.52
659 661 4.021456 TCGGAAGAGTTATCTGCAACAAGA 60.021 41.667 0.00 0.00 35.37 3.02
660 662 4.092091 GTCGGAAGAGTTATCTGCAACAAG 59.908 45.833 0.00 0.00 43.49 3.16
661 663 3.994392 GTCGGAAGAGTTATCTGCAACAA 59.006 43.478 0.00 0.00 43.49 2.83
662 664 3.258372 AGTCGGAAGAGTTATCTGCAACA 59.742 43.478 0.00 0.00 42.17 3.33
663 665 3.851098 AGTCGGAAGAGTTATCTGCAAC 58.149 45.455 0.00 0.00 42.17 4.17
674 676 0.784778 GACACGCAAAGTCGGAAGAG 59.215 55.000 0.00 0.00 43.49 2.85
675 677 0.103390 TGACACGCAAAGTCGGAAGA 59.897 50.000 0.00 0.00 38.83 2.87
676 678 0.934496 TTGACACGCAAAGTCGGAAG 59.066 50.000 0.00 0.00 38.83 3.46
677 679 0.934496 CTTGACACGCAAAGTCGGAA 59.066 50.000 0.00 0.00 38.83 4.30
678 680 0.878523 CCTTGACACGCAAAGTCGGA 60.879 55.000 0.00 0.00 38.83 4.55
679 681 0.878523 TCCTTGACACGCAAAGTCGG 60.879 55.000 0.00 0.00 38.83 4.79
680 682 0.934496 TTCCTTGACACGCAAAGTCG 59.066 50.000 0.00 0.00 38.83 4.18
681 683 3.181500 ACTTTTCCTTGACACGCAAAGTC 60.181 43.478 0.00 0.00 35.74 3.01
682 684 2.752903 ACTTTTCCTTGACACGCAAAGT 59.247 40.909 0.00 0.00 35.74 2.66
683 685 3.108144 CACTTTTCCTTGACACGCAAAG 58.892 45.455 0.00 0.00 35.74 2.77
684 686 2.733858 GCACTTTTCCTTGACACGCAAA 60.734 45.455 0.00 0.00 35.74 3.68
685 687 1.202245 GCACTTTTCCTTGACACGCAA 60.202 47.619 0.00 0.00 34.73 4.85
686 688 0.380378 GCACTTTTCCTTGACACGCA 59.620 50.000 0.00 0.00 0.00 5.24
687 689 0.317854 GGCACTTTTCCTTGACACGC 60.318 55.000 0.00 0.00 0.00 5.34
688 690 1.308998 AGGCACTTTTCCTTGACACG 58.691 50.000 0.00 0.00 27.25 4.49
706 708 0.318107 CGGCTGCAACAACCTGAAAG 60.318 55.000 0.50 0.00 0.00 2.62
707 709 1.034838 ACGGCTGCAACAACCTGAAA 61.035 50.000 0.50 0.00 0.00 2.69
708 710 1.453015 ACGGCTGCAACAACCTGAA 60.453 52.632 0.50 0.00 0.00 3.02
709 711 2.186160 CACGGCTGCAACAACCTGA 61.186 57.895 0.50 0.00 0.00 3.86
710 712 1.723608 TTCACGGCTGCAACAACCTG 61.724 55.000 0.50 0.00 0.00 4.00
711 713 0.823356 ATTCACGGCTGCAACAACCT 60.823 50.000 0.50 0.00 0.00 3.50
712 714 0.878416 TATTCACGGCTGCAACAACC 59.122 50.000 0.50 0.00 0.00 3.77
713 715 1.265635 TGTATTCACGGCTGCAACAAC 59.734 47.619 0.50 0.00 0.00 3.32
714 716 1.535028 CTGTATTCACGGCTGCAACAA 59.465 47.619 0.50 0.00 0.00 2.83
715 717 1.155889 CTGTATTCACGGCTGCAACA 58.844 50.000 0.50 0.00 0.00 3.33
716 718 1.438651 TCTGTATTCACGGCTGCAAC 58.561 50.000 0.50 0.00 0.00 4.17
717 719 2.177394 TTCTGTATTCACGGCTGCAA 57.823 45.000 0.50 0.00 0.00 4.08
718 720 2.177394 TTTCTGTATTCACGGCTGCA 57.823 45.000 0.50 0.00 0.00 4.41
719 721 3.188460 TCTTTTTCTGTATTCACGGCTGC 59.812 43.478 0.00 0.00 0.00 5.25
720 722 5.122239 TGATCTTTTTCTGTATTCACGGCTG 59.878 40.000 0.00 0.00 0.00 4.85
721 723 5.245531 TGATCTTTTTCTGTATTCACGGCT 58.754 37.500 0.00 0.00 0.00 5.52
722 724 5.545658 TGATCTTTTTCTGTATTCACGGC 57.454 39.130 0.00 0.00 0.00 5.68
723 725 7.133891 AGTTGATCTTTTTCTGTATTCACGG 57.866 36.000 0.00 0.00 0.00 4.94
724 726 7.893236 CGTAGTTGATCTTTTTCTGTATTCACG 59.107 37.037 0.00 0.00 0.00 4.35
725 727 8.169268 CCGTAGTTGATCTTTTTCTGTATTCAC 58.831 37.037 0.00 0.00 0.00 3.18
726 728 7.876068 ACCGTAGTTGATCTTTTTCTGTATTCA 59.124 33.333 0.00 0.00 0.00 2.57
727 729 8.252964 ACCGTAGTTGATCTTTTTCTGTATTC 57.747 34.615 0.00 0.00 0.00 1.75
728 730 8.617290 AACCGTAGTTGATCTTTTTCTGTATT 57.383 30.769 0.00 0.00 33.97 1.89
729 731 8.095169 AGAACCGTAGTTGATCTTTTTCTGTAT 58.905 33.333 0.00 0.00 35.94 2.29
730 732 7.439381 AGAACCGTAGTTGATCTTTTTCTGTA 58.561 34.615 0.00 0.00 35.94 2.74
731 733 6.289064 AGAACCGTAGTTGATCTTTTTCTGT 58.711 36.000 0.00 0.00 35.94 3.41
732 734 6.400091 CGAGAACCGTAGTTGATCTTTTTCTG 60.400 42.308 0.00 0.00 35.94 3.02
733 735 5.634020 CGAGAACCGTAGTTGATCTTTTTCT 59.366 40.000 0.00 0.00 35.94 2.52
734 736 5.632347 TCGAGAACCGTAGTTGATCTTTTTC 59.368 40.000 0.00 0.00 35.94 2.29
735 737 5.535333 TCGAGAACCGTAGTTGATCTTTTT 58.465 37.500 0.00 0.00 35.94 1.94
736 738 5.130292 TCGAGAACCGTAGTTGATCTTTT 57.870 39.130 0.00 0.00 35.94 2.27
737 739 4.778534 TCGAGAACCGTAGTTGATCTTT 57.221 40.909 0.00 0.00 35.94 2.52
738 740 4.158025 ACATCGAGAACCGTAGTTGATCTT 59.842 41.667 0.00 0.00 35.94 2.40
739 741 3.695060 ACATCGAGAACCGTAGTTGATCT 59.305 43.478 0.00 0.00 35.94 2.75
740 742 4.030134 ACATCGAGAACCGTAGTTGATC 57.970 45.455 0.00 0.00 35.94 2.92
741 743 5.769484 ATACATCGAGAACCGTAGTTGAT 57.231 39.130 0.00 0.00 35.94 2.57
742 744 5.571784 AATACATCGAGAACCGTAGTTGA 57.428 39.130 0.00 0.00 35.94 3.18
743 745 9.062674 CATATAATACATCGAGAACCGTAGTTG 57.937 37.037 0.00 0.00 35.94 3.16
744 746 7.754027 GCATATAATACATCGAGAACCGTAGTT 59.246 37.037 0.00 0.00 39.54 2.24
745 747 7.120873 AGCATATAATACATCGAGAACCGTAGT 59.879 37.037 0.00 0.00 39.75 2.73
746 748 7.473366 AGCATATAATACATCGAGAACCGTAG 58.527 38.462 0.00 0.00 39.75 3.51
747 749 7.387119 AGCATATAATACATCGAGAACCGTA 57.613 36.000 0.00 0.00 39.75 4.02
748 750 6.268825 AGCATATAATACATCGAGAACCGT 57.731 37.500 0.00 0.00 39.75 4.83
749 751 7.220300 GGTAAGCATATAATACATCGAGAACCG 59.780 40.741 0.00 0.00 40.25 4.44
750 752 8.251721 AGGTAAGCATATAATACATCGAGAACC 58.748 37.037 0.00 0.00 0.00 3.62
751 753 9.640963 AAGGTAAGCATATAATACATCGAGAAC 57.359 33.333 0.00 0.00 0.00 3.01
755 757 9.990360 TCAAAAGGTAAGCATATAATACATCGA 57.010 29.630 0.00 0.00 0.00 3.59
759 761 9.688091 TGGTTCAAAAGGTAAGCATATAATACA 57.312 29.630 0.00 0.00 0.00 2.29
761 763 9.349713 CCTGGTTCAAAAGGTAAGCATATAATA 57.650 33.333 0.00 0.00 33.09 0.98
762 764 8.058847 TCCTGGTTCAAAAGGTAAGCATATAAT 58.941 33.333 0.00 0.00 34.94 1.28
763 765 7.406916 TCCTGGTTCAAAAGGTAAGCATATAA 58.593 34.615 0.00 0.00 34.94 0.98
764 766 6.964464 TCCTGGTTCAAAAGGTAAGCATATA 58.036 36.000 0.00 0.00 34.94 0.86
765 767 5.826643 TCCTGGTTCAAAAGGTAAGCATAT 58.173 37.500 0.00 0.00 34.94 1.78
766 768 5.249780 TCCTGGTTCAAAAGGTAAGCATA 57.750 39.130 0.00 0.00 34.94 3.14
767 769 4.112634 TCCTGGTTCAAAAGGTAAGCAT 57.887 40.909 0.00 0.00 34.94 3.79
768 770 3.586470 TCCTGGTTCAAAAGGTAAGCA 57.414 42.857 0.00 0.00 34.94 3.91
769 771 4.280929 ACATTCCTGGTTCAAAAGGTAAGC 59.719 41.667 0.00 0.00 34.94 3.09
770 772 6.349363 GCTACATTCCTGGTTCAAAAGGTAAG 60.349 42.308 0.00 0.00 34.94 2.34
771 773 5.475564 GCTACATTCCTGGTTCAAAAGGTAA 59.524 40.000 0.00 0.00 34.94 2.85
772 774 5.007682 GCTACATTCCTGGTTCAAAAGGTA 58.992 41.667 0.00 0.00 34.94 3.08
773 775 3.826729 GCTACATTCCTGGTTCAAAAGGT 59.173 43.478 0.00 0.00 34.94 3.50
774 776 3.826157 TGCTACATTCCTGGTTCAAAAGG 59.174 43.478 0.00 0.00 34.65 3.11
775 777 5.241506 TCTTGCTACATTCCTGGTTCAAAAG 59.758 40.000 0.00 0.00 0.00 2.27
776 778 5.136828 TCTTGCTACATTCCTGGTTCAAAA 58.863 37.500 0.00 0.00 0.00 2.44
777 779 4.724399 TCTTGCTACATTCCTGGTTCAAA 58.276 39.130 0.00 0.00 0.00 2.69
778 780 4.365514 TCTTGCTACATTCCTGGTTCAA 57.634 40.909 0.00 0.00 0.00 2.69
779 781 4.574674 ATCTTGCTACATTCCTGGTTCA 57.425 40.909 0.00 0.00 0.00 3.18
780 782 4.943705 TCAATCTTGCTACATTCCTGGTTC 59.056 41.667 0.00 0.00 0.00 3.62
781 783 4.922206 TCAATCTTGCTACATTCCTGGTT 58.078 39.130 0.00 0.00 0.00 3.67
782 784 4.018960 ACTCAATCTTGCTACATTCCTGGT 60.019 41.667 0.00 0.00 0.00 4.00
783 785 4.334759 CACTCAATCTTGCTACATTCCTGG 59.665 45.833 0.00 0.00 0.00 4.45
784 786 4.940046 ACACTCAATCTTGCTACATTCCTG 59.060 41.667 0.00 0.00 0.00 3.86
785 787 5.171339 ACACTCAATCTTGCTACATTCCT 57.829 39.130 0.00 0.00 0.00 3.36
786 788 4.937620 TGACACTCAATCTTGCTACATTCC 59.062 41.667 0.00 0.00 0.00 3.01
787 789 6.486253 TTGACACTCAATCTTGCTACATTC 57.514 37.500 0.00 0.00 30.26 2.67
788 790 6.882610 TTTGACACTCAATCTTGCTACATT 57.117 33.333 0.00 0.00 36.11 2.71
789 791 6.432162 ACATTTGACACTCAATCTTGCTACAT 59.568 34.615 0.00 0.00 36.11 2.29
790 792 5.764686 ACATTTGACACTCAATCTTGCTACA 59.235 36.000 0.00 0.00 36.11 2.74
791 793 6.073058 TGACATTTGACACTCAATCTTGCTAC 60.073 38.462 0.00 0.00 36.11 3.58
792 794 5.997129 TGACATTTGACACTCAATCTTGCTA 59.003 36.000 0.00 0.00 36.11 3.49
793 795 4.823442 TGACATTTGACACTCAATCTTGCT 59.177 37.500 0.00 0.00 36.11 3.91
794 796 5.112220 TGACATTTGACACTCAATCTTGC 57.888 39.130 0.00 0.00 36.11 4.01
795 797 6.800408 GTCATGACATTTGACACTCAATCTTG 59.200 38.462 21.07 0.00 42.43 3.02
796 798 6.713903 AGTCATGACATTTGACACTCAATCTT 59.286 34.615 27.02 0.00 44.73 2.40
797 799 6.236409 AGTCATGACATTTGACACTCAATCT 58.764 36.000 27.02 0.00 44.73 2.40
798 800 6.492007 AGTCATGACATTTGACACTCAATC 57.508 37.500 27.02 0.00 44.73 2.67
799 801 9.322773 CTATAGTCATGACATTTGACACTCAAT 57.677 33.333 27.02 4.30 44.73 2.57
800 802 8.314021 ACTATAGTCATGACATTTGACACTCAA 58.686 33.333 27.02 0.66 44.73 3.02
801 803 7.761249 CACTATAGTCATGACATTTGACACTCA 59.239 37.037 27.02 1.27 44.73 3.41
802 804 7.761704 ACACTATAGTCATGACATTTGACACTC 59.238 37.037 27.02 0.00 44.73 3.51
803 805 7.615403 ACACTATAGTCATGACATTTGACACT 58.385 34.615 27.02 6.18 44.73 3.55
804 806 7.834068 ACACTATAGTCATGACATTTGACAC 57.166 36.000 27.02 0.00 44.73 3.67
805 807 9.586435 CTAACACTATAGTCATGACATTTGACA 57.414 33.333 27.02 4.66 44.73 3.58
806 808 9.587772 ACTAACACTATAGTCATGACATTTGAC 57.412 33.333 27.02 0.00 43.05 3.18
810 812 9.197306 TGGTACTAACACTATAGTCATGACATT 57.803 33.333 27.02 15.85 37.34 2.71
811 813 8.762481 TGGTACTAACACTATAGTCATGACAT 57.238 34.615 27.02 19.03 37.34 3.06
812 814 7.201794 GCTGGTACTAACACTATAGTCATGACA 60.202 40.741 27.02 13.67 37.34 3.58
813 815 7.140048 GCTGGTACTAACACTATAGTCATGAC 58.860 42.308 18.47 18.47 37.34 3.06
814 816 6.264744 GGCTGGTACTAACACTATAGTCATGA 59.735 42.308 1.26 0.00 37.34 3.07
815 817 6.040504 TGGCTGGTACTAACACTATAGTCATG 59.959 42.308 1.26 0.00 37.34 3.07
816 818 6.134055 TGGCTGGTACTAACACTATAGTCAT 58.866 40.000 1.26 0.00 37.34 3.06
817 819 5.512298 TGGCTGGTACTAACACTATAGTCA 58.488 41.667 1.26 0.00 37.34 3.41
818 820 6.096564 AGTTGGCTGGTACTAACACTATAGTC 59.903 42.308 1.26 0.00 37.34 2.59
819 821 5.956563 AGTTGGCTGGTACTAACACTATAGT 59.043 40.000 0.00 0.00 39.41 2.12
820 822 6.096423 TGAGTTGGCTGGTACTAACACTATAG 59.904 42.308 0.00 0.00 0.00 1.31
821 823 5.953548 TGAGTTGGCTGGTACTAACACTATA 59.046 40.000 0.00 0.00 0.00 1.31
822 824 4.775780 TGAGTTGGCTGGTACTAACACTAT 59.224 41.667 0.00 0.00 0.00 2.12
823 825 4.154176 TGAGTTGGCTGGTACTAACACTA 58.846 43.478 0.00 0.00 0.00 2.74
824 826 2.969950 TGAGTTGGCTGGTACTAACACT 59.030 45.455 0.00 0.00 0.00 3.55
825 827 3.396260 TGAGTTGGCTGGTACTAACAC 57.604 47.619 0.00 0.00 0.00 3.32
826 828 4.131596 GTTTGAGTTGGCTGGTACTAACA 58.868 43.478 0.00 0.00 0.00 2.41
827 829 4.131596 TGTTTGAGTTGGCTGGTACTAAC 58.868 43.478 0.00 0.00 0.00 2.34
828 830 4.425180 TGTTTGAGTTGGCTGGTACTAA 57.575 40.909 0.00 0.00 0.00 2.24
829 831 4.425180 TTGTTTGAGTTGGCTGGTACTA 57.575 40.909 0.00 0.00 0.00 1.82
830 832 3.290948 TTGTTTGAGTTGGCTGGTACT 57.709 42.857 0.00 0.00 0.00 2.73
831 833 5.897377 ATATTGTTTGAGTTGGCTGGTAC 57.103 39.130 0.00 0.00 0.00 3.34
832 834 6.597672 CACTATATTGTTTGAGTTGGCTGGTA 59.402 38.462 0.00 0.00 0.00 3.25
833 835 5.415701 CACTATATTGTTTGAGTTGGCTGGT 59.584 40.000 0.00 0.00 0.00 4.00
834 836 5.647658 TCACTATATTGTTTGAGTTGGCTGG 59.352 40.000 0.00 0.00 0.00 4.85
835 837 6.741992 TCACTATATTGTTTGAGTTGGCTG 57.258 37.500 0.00 0.00 0.00 4.85
836 838 7.309194 GGTTTCACTATATTGTTTGAGTTGGCT 60.309 37.037 0.00 0.00 0.00 4.75
837 839 6.806739 GGTTTCACTATATTGTTTGAGTTGGC 59.193 38.462 0.00 0.00 0.00 4.52
838 840 7.881142 TGGTTTCACTATATTGTTTGAGTTGG 58.119 34.615 0.00 0.00 0.00 3.77
839 841 9.345517 CATGGTTTCACTATATTGTTTGAGTTG 57.654 33.333 0.00 0.00 0.00 3.16
840 842 8.522830 CCATGGTTTCACTATATTGTTTGAGTT 58.477 33.333 2.57 0.00 0.00 3.01
841 843 7.888021 TCCATGGTTTCACTATATTGTTTGAGT 59.112 33.333 12.58 0.00 0.00 3.41
842 844 8.279970 TCCATGGTTTCACTATATTGTTTGAG 57.720 34.615 12.58 0.00 0.00 3.02
843 845 7.888021 ACTCCATGGTTTCACTATATTGTTTGA 59.112 33.333 12.58 0.00 0.00 2.69
844 846 7.970061 CACTCCATGGTTTCACTATATTGTTTG 59.030 37.037 12.58 0.00 0.00 2.93
845 847 7.888021 TCACTCCATGGTTTCACTATATTGTTT 59.112 33.333 12.58 0.00 0.00 2.83
846 848 7.402054 TCACTCCATGGTTTCACTATATTGTT 58.598 34.615 12.58 0.00 0.00 2.83
847 849 6.957631 TCACTCCATGGTTTCACTATATTGT 58.042 36.000 12.58 0.00 0.00 2.71
848 850 7.864108 TTCACTCCATGGTTTCACTATATTG 57.136 36.000 12.58 0.00 0.00 1.90
849 851 7.888021 TGTTTCACTCCATGGTTTCACTATATT 59.112 33.333 12.58 0.00 0.00 1.28
850 852 7.402054 TGTTTCACTCCATGGTTTCACTATAT 58.598 34.615 12.58 0.00 0.00 0.86
851 853 6.774673 TGTTTCACTCCATGGTTTCACTATA 58.225 36.000 12.58 0.00 0.00 1.31
852 854 5.630121 TGTTTCACTCCATGGTTTCACTAT 58.370 37.500 12.58 0.00 0.00 2.12
853 855 5.042463 TGTTTCACTCCATGGTTTCACTA 57.958 39.130 12.58 0.00 0.00 2.74
854 856 3.897239 TGTTTCACTCCATGGTTTCACT 58.103 40.909 12.58 0.00 0.00 3.41
855 857 4.853924 ATGTTTCACTCCATGGTTTCAC 57.146 40.909 12.58 3.34 0.00 3.18
856 858 5.105797 GCATATGTTTCACTCCATGGTTTCA 60.106 40.000 12.58 3.63 0.00 2.69
857 859 5.126061 AGCATATGTTTCACTCCATGGTTTC 59.874 40.000 12.58 0.00 0.00 2.78
858 860 5.018809 AGCATATGTTTCACTCCATGGTTT 58.981 37.500 12.58 0.00 0.00 3.27
859 861 4.603131 AGCATATGTTTCACTCCATGGTT 58.397 39.130 12.58 0.00 0.00 3.67
860 862 4.202441 GAGCATATGTTTCACTCCATGGT 58.798 43.478 12.58 0.00 0.00 3.55
861 863 4.036027 GTGAGCATATGTTTCACTCCATGG 59.964 45.833 23.73 4.97 38.49 3.66
862 864 4.036027 GGTGAGCATATGTTTCACTCCATG 59.964 45.833 26.92 0.00 40.71 3.66
863 865 4.202441 GGTGAGCATATGTTTCACTCCAT 58.798 43.478 26.92 0.00 40.71 3.41
864 866 3.008923 TGGTGAGCATATGTTTCACTCCA 59.991 43.478 26.92 20.17 40.71 3.86
865 867 3.609853 TGGTGAGCATATGTTTCACTCC 58.390 45.455 26.92 18.64 40.71 3.85
866 868 4.095483 CCTTGGTGAGCATATGTTTCACTC 59.905 45.833 26.92 20.96 40.71 3.51
867 869 4.012374 CCTTGGTGAGCATATGTTTCACT 58.988 43.478 26.92 9.91 40.71 3.41
868 870 3.758554 ACCTTGGTGAGCATATGTTTCAC 59.241 43.478 23.30 23.30 40.29 3.18
869 871 4.032960 ACCTTGGTGAGCATATGTTTCA 57.967 40.909 4.29 6.29 0.00 2.69
870 872 5.391312 AAACCTTGGTGAGCATATGTTTC 57.609 39.130 4.29 3.71 0.00 2.78
871 873 5.806654 AAAACCTTGGTGAGCATATGTTT 57.193 34.783 4.29 0.00 0.00 2.83
872 874 6.151144 GTCTAAAACCTTGGTGAGCATATGTT 59.849 38.462 4.29 0.00 0.00 2.71
873 875 5.648092 GTCTAAAACCTTGGTGAGCATATGT 59.352 40.000 4.29 0.00 0.00 2.29
874 876 5.647658 TGTCTAAAACCTTGGTGAGCATATG 59.352 40.000 0.00 0.00 0.00 1.78
875 877 5.815581 TGTCTAAAACCTTGGTGAGCATAT 58.184 37.500 0.00 0.00 0.00 1.78
876 878 5.235850 TGTCTAAAACCTTGGTGAGCATA 57.764 39.130 0.00 0.00 0.00 3.14
877 879 4.098914 TGTCTAAAACCTTGGTGAGCAT 57.901 40.909 0.00 0.00 0.00 3.79
878 880 3.569194 TGTCTAAAACCTTGGTGAGCA 57.431 42.857 0.00 0.00 0.00 4.26
879 881 3.883489 ACTTGTCTAAAACCTTGGTGAGC 59.117 43.478 0.00 0.00 0.00 4.26
880 882 5.221048 CCAACTTGTCTAAAACCTTGGTGAG 60.221 44.000 0.00 0.00 0.00 3.51
881 883 4.642885 CCAACTTGTCTAAAACCTTGGTGA 59.357 41.667 0.00 0.00 0.00 4.02
882 884 4.642885 TCCAACTTGTCTAAAACCTTGGTG 59.357 41.667 0.00 0.00 32.00 4.17
883 885 4.862371 TCCAACTTGTCTAAAACCTTGGT 58.138 39.130 0.00 0.00 32.00 3.67
884 886 5.301805 ACATCCAACTTGTCTAAAACCTTGG 59.698 40.000 0.00 0.00 31.61 3.61
885 887 6.391227 ACATCCAACTTGTCTAAAACCTTG 57.609 37.500 0.00 0.00 0.00 3.61
886 888 6.715264 CCTACATCCAACTTGTCTAAAACCTT 59.285 38.462 0.00 0.00 0.00 3.50
887 889 6.238648 CCTACATCCAACTTGTCTAAAACCT 58.761 40.000 0.00 0.00 0.00 3.50
888 890 5.106277 GCCTACATCCAACTTGTCTAAAACC 60.106 44.000 0.00 0.00 0.00 3.27
889 891 5.106277 GGCCTACATCCAACTTGTCTAAAAC 60.106 44.000 0.00 0.00 0.00 2.43
890 892 5.007682 GGCCTACATCCAACTTGTCTAAAA 58.992 41.667 0.00 0.00 0.00 1.52
891 893 4.585879 GGCCTACATCCAACTTGTCTAAA 58.414 43.478 0.00 0.00 0.00 1.85
892 894 3.369052 CGGCCTACATCCAACTTGTCTAA 60.369 47.826 0.00 0.00 0.00 2.10
893 895 2.167693 CGGCCTACATCCAACTTGTCTA 59.832 50.000 0.00 0.00 0.00 2.59
894 896 1.066143 CGGCCTACATCCAACTTGTCT 60.066 52.381 0.00 0.00 0.00 3.41
895 897 1.338769 ACGGCCTACATCCAACTTGTC 60.339 52.381 0.00 0.00 0.00 3.18
896 898 0.690762 ACGGCCTACATCCAACTTGT 59.309 50.000 0.00 0.00 0.00 3.16
897 899 2.093658 AGTACGGCCTACATCCAACTTG 60.094 50.000 0.00 0.00 0.00 3.16
898 900 2.167900 GAGTACGGCCTACATCCAACTT 59.832 50.000 0.00 0.00 0.00 2.66
899 901 1.755380 GAGTACGGCCTACATCCAACT 59.245 52.381 0.00 0.00 0.00 3.16
900 902 1.755380 AGAGTACGGCCTACATCCAAC 59.245 52.381 0.00 0.00 0.00 3.77
901 903 2.154567 AGAGTACGGCCTACATCCAA 57.845 50.000 0.00 0.00 0.00 3.53
902 904 2.154567 AAGAGTACGGCCTACATCCA 57.845 50.000 0.00 0.00 0.00 3.41
903 905 3.484407 TCTAAGAGTACGGCCTACATCC 58.516 50.000 0.00 0.00 0.00 3.51
904 906 5.708877 AATCTAAGAGTACGGCCTACATC 57.291 43.478 0.00 3.12 0.00 3.06
905 907 5.597182 TCAAATCTAAGAGTACGGCCTACAT 59.403 40.000 0.00 0.00 0.00 2.29
906 908 4.951715 TCAAATCTAAGAGTACGGCCTACA 59.048 41.667 0.00 0.00 0.00 2.74
907 909 5.067544 ACTCAAATCTAAGAGTACGGCCTAC 59.932 44.000 0.00 2.52 42.92 3.18
908 910 5.067413 CACTCAAATCTAAGAGTACGGCCTA 59.933 44.000 0.00 0.00 42.87 3.93
909 911 4.024670 ACTCAAATCTAAGAGTACGGCCT 58.975 43.478 0.00 0.00 42.92 5.19
910 912 4.113354 CACTCAAATCTAAGAGTACGGCC 58.887 47.826 0.00 0.00 42.87 6.13
911 913 4.745649 ACACTCAAATCTAAGAGTACGGC 58.254 43.478 0.00 0.00 42.87 5.68
912 914 6.622549 AGAACACTCAAATCTAAGAGTACGG 58.377 40.000 0.00 0.00 42.87 4.02
913 915 7.483375 CAGAGAACACTCAAATCTAAGAGTACG 59.517 40.741 0.00 0.00 42.87 3.67
914 916 7.274686 GCAGAGAACACTCAAATCTAAGAGTAC 59.725 40.741 0.00 0.00 42.87 2.73
915 917 7.177568 AGCAGAGAACACTCAAATCTAAGAGTA 59.822 37.037 0.00 0.00 42.87 2.59
916 918 6.014669 AGCAGAGAACACTCAAATCTAAGAGT 60.015 38.462 0.00 0.00 45.46 3.24
917 919 6.310956 CAGCAGAGAACACTCAAATCTAAGAG 59.689 42.308 0.00 0.00 37.87 2.85
918 920 6.162079 CAGCAGAGAACACTCAAATCTAAGA 58.838 40.000 0.00 0.00 33.55 2.10
919 921 5.350914 CCAGCAGAGAACACTCAAATCTAAG 59.649 44.000 0.00 0.00 33.55 2.18
920 922 5.012046 TCCAGCAGAGAACACTCAAATCTAA 59.988 40.000 0.00 0.00 33.55 2.10
921 923 4.528206 TCCAGCAGAGAACACTCAAATCTA 59.472 41.667 0.00 0.00 33.55 1.98
922 924 3.326006 TCCAGCAGAGAACACTCAAATCT 59.674 43.478 0.00 0.00 33.55 2.40
923 925 3.668447 TCCAGCAGAGAACACTCAAATC 58.332 45.455 0.00 0.00 33.55 2.17
924 926 3.072184 ACTCCAGCAGAGAACACTCAAAT 59.928 43.478 10.46 0.00 46.50 2.32
925 927 2.435805 ACTCCAGCAGAGAACACTCAAA 59.564 45.455 10.46 0.00 46.50 2.69
926 928 2.042464 ACTCCAGCAGAGAACACTCAA 58.958 47.619 10.46 0.00 46.50 3.02
927 929 1.709578 ACTCCAGCAGAGAACACTCA 58.290 50.000 10.46 0.00 46.50 3.41
928 930 4.464069 AATACTCCAGCAGAGAACACTC 57.536 45.455 10.46 0.00 46.50 3.51
929 931 5.020132 AGTAATACTCCAGCAGAGAACACT 58.980 41.667 10.46 5.42 46.50 3.55
930 932 5.331876 AGTAATACTCCAGCAGAGAACAC 57.668 43.478 10.46 3.59 46.50 3.32
931 933 7.178628 ACTTAAGTAATACTCCAGCAGAGAACA 59.821 37.037 6.26 0.00 46.50 3.18
932 934 7.489757 CACTTAAGTAATACTCCAGCAGAGAAC 59.510 40.741 8.04 3.88 46.50 3.01
933 935 7.363880 CCACTTAAGTAATACTCCAGCAGAGAA 60.364 40.741 8.04 0.00 46.50 2.87
934 936 6.096987 CCACTTAAGTAATACTCCAGCAGAGA 59.903 42.308 8.04 0.00 46.50 3.10
936 938 5.395324 GCCACTTAAGTAATACTCCAGCAGA 60.395 44.000 8.04 0.00 0.00 4.26
937 939 4.811557 GCCACTTAAGTAATACTCCAGCAG 59.188 45.833 8.04 0.00 0.00 4.24
938 940 4.469945 AGCCACTTAAGTAATACTCCAGCA 59.530 41.667 8.04 0.00 0.00 4.41
939 941 5.024785 AGCCACTTAAGTAATACTCCAGC 57.975 43.478 8.04 1.01 0.00 4.85
940 942 5.163540 ACGAGCCACTTAAGTAATACTCCAG 60.164 44.000 8.04 4.36 0.00 3.86
941 943 4.708421 ACGAGCCACTTAAGTAATACTCCA 59.292 41.667 8.04 0.00 0.00 3.86
942 944 5.041940 CACGAGCCACTTAAGTAATACTCC 58.958 45.833 8.04 0.00 0.00 3.85
943 945 4.503370 GCACGAGCCACTTAAGTAATACTC 59.497 45.833 8.04 11.12 33.58 2.59
944 946 4.081862 TGCACGAGCCACTTAAGTAATACT 60.082 41.667 8.04 3.30 41.13 2.12
945 947 4.178540 TGCACGAGCCACTTAAGTAATAC 58.821 43.478 8.04 0.00 41.13 1.89
946 948 4.459390 TGCACGAGCCACTTAAGTAATA 57.541 40.909 8.04 0.00 41.13 0.98
947 949 3.328382 TGCACGAGCCACTTAAGTAAT 57.672 42.857 8.04 0.00 41.13 1.89
948 950 2.823924 TGCACGAGCCACTTAAGTAA 57.176 45.000 8.04 0.00 41.13 2.24
949 951 2.823924 TTGCACGAGCCACTTAAGTA 57.176 45.000 8.04 0.00 41.13 2.24
950 952 1.806542 CATTGCACGAGCCACTTAAGT 59.193 47.619 1.12 1.12 41.13 2.24
951 953 2.076100 TCATTGCACGAGCCACTTAAG 58.924 47.619 1.39 0.00 41.13 1.85
952 954 2.177394 TCATTGCACGAGCCACTTAA 57.823 45.000 1.39 0.00 41.13 1.85
953 955 2.076100 CTTCATTGCACGAGCCACTTA 58.924 47.619 1.39 0.00 41.13 2.24
954 956 0.877071 CTTCATTGCACGAGCCACTT 59.123 50.000 1.39 0.00 41.13 3.16
955 957 0.250467 ACTTCATTGCACGAGCCACT 60.250 50.000 1.39 0.00 41.13 4.00
956 958 0.110056 CACTTCATTGCACGAGCCAC 60.110 55.000 1.39 0.00 41.13 5.01
957 959 0.250252 TCACTTCATTGCACGAGCCA 60.250 50.000 1.39 0.00 41.13 4.75
958 960 1.089920 ATCACTTCATTGCACGAGCC 58.910 50.000 1.39 0.00 41.13 4.70
959 961 1.733912 TCATCACTTCATTGCACGAGC 59.266 47.619 0.00 0.00 42.57 5.03
960 962 3.242641 CCATCATCACTTCATTGCACGAG 60.243 47.826 0.00 0.00 0.00 4.18
961 963 2.679336 CCATCATCACTTCATTGCACGA 59.321 45.455 0.00 0.00 0.00 4.35
962 964 2.421073 ACCATCATCACTTCATTGCACG 59.579 45.455 0.00 0.00 0.00 5.34
963 965 5.530171 AGATACCATCATCACTTCATTGCAC 59.470 40.000 0.00 0.00 0.00 4.57
964 966 5.687780 AGATACCATCATCACTTCATTGCA 58.312 37.500 0.00 0.00 0.00 4.08
965 967 6.485984 AGAAGATACCATCATCACTTCATTGC 59.514 38.462 0.00 0.00 37.00 3.56
966 968 7.041303 CCAGAAGATACCATCATCACTTCATTG 60.041 40.741 0.00 0.00 37.00 2.82
967 969 6.996879 CCAGAAGATACCATCATCACTTCATT 59.003 38.462 0.00 0.00 37.00 2.57
968 970 6.100859 ACCAGAAGATACCATCATCACTTCAT 59.899 38.462 0.00 0.00 37.00 2.57
969 971 5.426509 ACCAGAAGATACCATCATCACTTCA 59.573 40.000 0.00 0.00 37.00 3.02
970 972 5.757320 CACCAGAAGATACCATCATCACTTC 59.243 44.000 0.00 0.00 35.47 3.01
971 973 5.426509 TCACCAGAAGATACCATCATCACTT 59.573 40.000 0.00 0.00 29.82 3.16
972 974 4.964897 TCACCAGAAGATACCATCATCACT 59.035 41.667 0.00 0.00 29.82 3.41
973 975 5.282055 TCACCAGAAGATACCATCATCAC 57.718 43.478 0.00 0.00 29.82 3.06
974 976 5.279156 CGATCACCAGAAGATACCATCATCA 60.279 44.000 0.00 0.00 29.82 3.07
975 977 5.167121 CGATCACCAGAAGATACCATCATC 58.833 45.833 0.00 0.00 0.00 2.92
976 978 4.562347 GCGATCACCAGAAGATACCATCAT 60.562 45.833 0.00 0.00 0.00 2.45
977 979 3.243873 GCGATCACCAGAAGATACCATCA 60.244 47.826 0.00 0.00 0.00 3.07
978 980 3.243873 TGCGATCACCAGAAGATACCATC 60.244 47.826 0.00 0.00 0.00 3.51
979 981 2.700371 TGCGATCACCAGAAGATACCAT 59.300 45.455 0.00 0.00 0.00 3.55
980 982 2.107366 TGCGATCACCAGAAGATACCA 58.893 47.619 0.00 0.00 0.00 3.25
981 983 2.890808 TGCGATCACCAGAAGATACC 57.109 50.000 0.00 0.00 0.00 2.73
982 984 3.062763 CCATGCGATCACCAGAAGATAC 58.937 50.000 0.00 0.00 0.00 2.24
983 985 2.965147 TCCATGCGATCACCAGAAGATA 59.035 45.455 0.00 0.00 0.00 1.98
984 986 1.764723 TCCATGCGATCACCAGAAGAT 59.235 47.619 0.00 0.00 0.00 2.40
985 987 1.194218 TCCATGCGATCACCAGAAGA 58.806 50.000 0.00 0.00 0.00 2.87
986 988 2.028420 TTCCATGCGATCACCAGAAG 57.972 50.000 0.00 0.00 0.00 2.85
987 989 2.715749 ATTCCATGCGATCACCAGAA 57.284 45.000 0.00 0.00 0.00 3.02
988 990 2.093021 TGAATTCCATGCGATCACCAGA 60.093 45.455 2.27 0.00 0.00 3.86
989 991 2.032550 GTGAATTCCATGCGATCACCAG 59.967 50.000 2.27 0.00 35.51 4.00
990 992 2.016318 GTGAATTCCATGCGATCACCA 58.984 47.619 2.27 0.00 35.51 4.17
991 993 2.763249 GTGAATTCCATGCGATCACC 57.237 50.000 2.27 0.00 35.51 4.02
992 994 1.003545 CGGTGAATTCCATGCGATCAC 60.004 52.381 2.27 9.39 39.65 3.06
993 995 1.134551 TCGGTGAATTCCATGCGATCA 60.135 47.619 2.27 0.00 0.00 2.92
994 996 1.581934 TCGGTGAATTCCATGCGATC 58.418 50.000 2.27 0.00 0.00 3.69
995 997 2.146342 GATCGGTGAATTCCATGCGAT 58.854 47.619 2.27 4.98 0.00 4.58
996 998 1.138859 AGATCGGTGAATTCCATGCGA 59.861 47.619 2.27 0.52 0.00 5.10
997 999 1.262417 CAGATCGGTGAATTCCATGCG 59.738 52.381 2.27 0.00 0.00 4.73
998 1000 2.292267 ACAGATCGGTGAATTCCATGC 58.708 47.619 2.27 0.00 0.00 4.06
999 1001 3.313526 GGAACAGATCGGTGAATTCCATG 59.686 47.826 8.93 0.00 36.44 3.66
1000 1002 3.200825 AGGAACAGATCGGTGAATTCCAT 59.799 43.478 14.40 0.97 38.46 3.41
1001 1003 2.571653 AGGAACAGATCGGTGAATTCCA 59.428 45.455 14.40 0.00 38.46 3.53
1002 1004 3.198872 GAGGAACAGATCGGTGAATTCC 58.801 50.000 2.27 2.81 36.63 3.01
1003 1005 2.860735 CGAGGAACAGATCGGTGAATTC 59.139 50.000 0.00 0.00 35.33 2.17
1004 1006 2.233922 ACGAGGAACAGATCGGTGAATT 59.766 45.455 0.00 0.00 43.12 2.17
1005 1007 1.825474 ACGAGGAACAGATCGGTGAAT 59.175 47.619 0.00 0.00 43.12 2.57
1006 1008 1.067846 CACGAGGAACAGATCGGTGAA 60.068 52.381 0.00 0.00 43.12 3.18
1007 1009 0.526211 CACGAGGAACAGATCGGTGA 59.474 55.000 0.00 0.00 43.12 4.02
1008 1010 1.078759 GCACGAGGAACAGATCGGTG 61.079 60.000 0.00 0.00 43.12 4.94
1009 1011 1.215647 GCACGAGGAACAGATCGGT 59.784 57.895 0.00 0.00 43.12 4.69
1010 1012 0.803768 CTGCACGAGGAACAGATCGG 60.804 60.000 0.00 0.00 43.12 4.18
1011 1013 0.803768 CCTGCACGAGGAACAGATCG 60.804 60.000 0.00 0.00 46.33 3.69
1012 1014 0.247736 ACCTGCACGAGGAACAGATC 59.752 55.000 0.00 0.00 46.33 2.75
1013 1015 0.687354 AACCTGCACGAGGAACAGAT 59.313 50.000 0.00 0.00 46.33 2.90
1014 1016 0.249868 CAACCTGCACGAGGAACAGA 60.250 55.000 0.00 0.00 46.33 3.41
1015 1017 0.249868 TCAACCTGCACGAGGAACAG 60.250 55.000 0.00 0.00 46.33 3.16
1016 1018 0.249868 CTCAACCTGCACGAGGAACA 60.250 55.000 0.00 0.00 46.33 3.18
1027 1029 0.318107 CTTTTGGTGCGCTCAACCTG 60.318 55.000 15.57 6.41 0.00 4.00
1056 1058 1.292223 GGTTAGAGCACCTGACGCA 59.708 57.895 0.00 0.00 32.63 5.24
1059 1061 0.984995 AAGGGGTTAGAGCACCTGAC 59.015 55.000 0.00 0.00 36.97 3.51
1065 1067 1.573108 CCTGAGAAGGGGTTAGAGCA 58.427 55.000 0.00 0.00 0.00 4.26
1077 1079 0.108585 GGAAGCACACACCCTGAGAA 59.891 55.000 0.00 0.00 0.00 2.87
1083 1085 2.185310 ATCCGAGGAAGCACACACCC 62.185 60.000 0.00 0.00 0.00 4.61
1086 1088 0.532573 GAGATCCGAGGAAGCACACA 59.467 55.000 0.00 0.00 0.00 3.72
1125 1127 9.635520 CTAAAGTCGTTTAGTTGGAGAAGAATA 57.364 33.333 0.00 0.00 40.21 1.75
1275 2222 9.482627 GAGACAAATTAGAGGTGGATATTACAG 57.517 37.037 0.00 0.00 0.00 2.74
1305 2253 3.181465 CCCAAGAACACGGCTACATAGAT 60.181 47.826 0.00 0.00 0.00 1.98
1308 2256 1.208535 CCCCAAGAACACGGCTACATA 59.791 52.381 0.00 0.00 0.00 2.29
1333 2281 7.763985 GGATAAGAGAAGACCAAAAGAAGAGAG 59.236 40.741 0.00 0.00 0.00 3.20
1447 2401 8.152118 CTGTTACAGATGCATTGGAAGTAATGC 61.152 40.741 6.50 14.60 46.19 3.56
1561 2515 1.048601 CCAGCGGTATACAGTGGGAT 58.951 55.000 5.01 0.00 0.00 3.85
1575 2529 3.250762 CCAATGTCCAACATATACCAGCG 59.749 47.826 0.00 0.00 37.97 5.18
1744 2716 4.320870 TGGTCGAATCTCCAAACCTTAAC 58.679 43.478 0.00 0.00 0.00 2.01
1783 2755 1.135527 CCAATTGATGCAGCACCGAAT 59.864 47.619 2.94 0.00 0.00 3.34
1816 2788 3.146104 AGTTCAGCATTGTAGCCACTT 57.854 42.857 0.00 0.00 34.23 3.16
2134 3131 4.670621 CACTTGTTTGACACAAATCTACGC 59.329 41.667 0.00 0.00 45.11 4.42
2137 3134 6.767524 AACCACTTGTTTGACACAAATCTA 57.232 33.333 0.00 0.00 45.11 1.98
2269 3266 5.589050 AGGTTAAAACAAACTGTCTGTCCTC 59.411 40.000 0.00 0.00 0.00 3.71
2346 3343 7.771183 AGAAACAAAAGCACAAGTAATGAGAA 58.229 30.769 0.00 0.00 0.00 2.87
2409 3409 4.103311 GGAAATAACCCTGCTAGACCATCT 59.897 45.833 0.00 0.00 0.00 2.90
2484 6006 5.534207 AGAAACAATGCATTTTCACTGGA 57.466 34.783 20.57 0.00 34.68 3.86
2538 6060 9.807921 TGTGTCATGGAGAGTACATATATAAGA 57.192 33.333 0.00 0.00 0.00 2.10
2571 7458 1.560923 CTCAAAGACTATCGCCGGTG 58.439 55.000 9.28 9.28 0.00 4.94
2572 7459 0.460311 CCTCAAAGACTATCGCCGGT 59.540 55.000 1.90 0.00 0.00 5.28
2573 7460 0.744874 TCCTCAAAGACTATCGCCGG 59.255 55.000 0.00 0.00 0.00 6.13
2574 7461 1.536284 GGTCCTCAAAGACTATCGCCG 60.536 57.143 0.00 0.00 36.95 6.46
2756 8965 3.709141 TCCTGTCAAATGGGATCATCGTA 59.291 43.478 0.00 0.00 32.24 3.43
2759 8968 4.162040 AGTCCTGTCAAATGGGATCATC 57.838 45.455 0.00 0.00 32.24 2.92
2828 9037 6.041979 ACAAAAATCACTTTGCCTAATCTGGT 59.958 34.615 0.00 0.00 39.46 4.00
2934 9157 0.107165 AGAATAAGGGCGGTTCCAGC 60.107 55.000 0.00 0.00 36.21 4.85
3026 9249 0.321996 AGGTCTTCTTGGGTCTTCGC 59.678 55.000 0.00 0.00 0.00 4.70
3086 9309 3.576118 ACTGAGCTCTGCTAAGAAGACAA 59.424 43.478 19.49 0.00 39.42 3.18
3145 9540 8.409371 TCAAATACTCTAGAAGATGTACTGCTG 58.591 37.037 0.00 0.00 34.91 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.