Multiple sequence alignment - TraesCS5D01G513500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G513500 chr5D 100.000 4569 0 0 1 4569 537662062 537657494 0.000000e+00 8438.0
1 TraesCS5D01G513500 chr5D 90.409 1199 60 17 1913 3059 97577322 97578517 0.000000e+00 1526.0
2 TraesCS5D01G513500 chr5D 95.349 559 24 2 3078 3636 97578661 97579217 0.000000e+00 887.0
3 TraesCS5D01G513500 chr5D 89.613 568 40 7 907 1459 97576242 97576805 0.000000e+00 704.0
4 TraesCS5D01G513500 chr5D 88.462 130 8 3 3827 3951 97579373 97579500 2.850000e-32 150.0
5 TraesCS5D01G513500 chr5D 83.974 156 7 8 4006 4146 97579769 97579921 2.870000e-27 134.0
6 TraesCS5D01G513500 chr5D 96.226 53 2 0 3632 3684 97579247 97579299 2.260000e-13 87.9
7 TraesCS5D01G513500 chr4A 92.119 2766 83 36 1916 4566 631903850 631901105 0.000000e+00 3775.0
8 TraesCS5D01G513500 chr4A 89.184 980 61 21 866 1818 631904820 631903859 0.000000e+00 1181.0
9 TraesCS5D01G513500 chr4A 85.232 1036 79 20 1913 2912 58787952 58786955 0.000000e+00 998.0
10 TraesCS5D01G513500 chr4A 89.455 550 52 3 913 1457 58789149 58788601 0.000000e+00 689.0
11 TraesCS5D01G513500 chr4A 88.496 113 8 3 1678 1790 58788132 58788025 1.030000e-26 132.0
12 TraesCS5D01G513500 chr4A 83.158 95 4 9 556 643 572875016 572875105 4.900000e-10 76.8
13 TraesCS5D01G513500 chr5B 92.986 1768 67 14 1912 3636 678317266 678315513 0.000000e+00 2525.0
14 TraesCS5D01G513500 chr5B 91.107 1788 90 24 1913 3636 105539484 105537702 0.000000e+00 2357.0
15 TraesCS5D01G513500 chr5B 87.997 1183 63 25 1913 3031 106951591 106952758 0.000000e+00 1325.0
16 TraesCS5D01G513500 chr5B 84.176 1207 115 40 651 1818 678318440 678317271 0.000000e+00 1101.0
17 TraesCS5D01G513500 chr5B 93.456 596 25 6 3102 3684 106953053 106953647 0.000000e+00 872.0
18 TraesCS5D01G513500 chr5B 90.123 567 37 10 908 1459 106950506 106951068 0.000000e+00 719.0
19 TraesCS5D01G513500 chr5B 89.531 554 41 8 921 1459 105540553 105540002 0.000000e+00 686.0
20 TraesCS5D01G513500 chr5B 87.805 574 22 19 4012 4552 678315013 678314455 3.000000e-176 628.0
21 TraesCS5D01G513500 chr5B 89.785 186 6 6 3641 3815 678315474 678315291 4.600000e-55 226.0
22 TraesCS5D01G513500 chr5B 79.508 244 33 9 3827 4060 105537562 105537326 1.700000e-34 158.0
23 TraesCS5D01G513500 chr5B 81.410 156 10 9 4006 4146 105537278 105537127 4.830000e-20 110.0
24 TraesCS5D01G513500 chr5B 78.916 166 22 9 403 562 683566014 683566172 2.910000e-17 100.0
25 TraesCS5D01G513500 chr5B 87.671 73 9 0 571 643 388981593 388981521 8.140000e-13 86.1
26 TraesCS5D01G513500 chr5B 97.872 47 1 0 3632 3678 105537672 105537626 1.050000e-11 82.4
27 TraesCS5D01G513500 chr5B 86.486 74 8 2 570 643 530646166 530646095 3.790000e-11 80.5
28 TraesCS5D01G513500 chr5A 89.684 1202 62 22 1913 3060 106166343 106165150 0.000000e+00 1476.0
29 TraesCS5D01G513500 chr5A 93.428 563 33 2 3076 3635 106164847 106164286 0.000000e+00 832.0
30 TraesCS5D01G513500 chr5A 89.982 569 36 9 907 1459 106167402 106166839 0.000000e+00 715.0
31 TraesCS5D01G513500 chr5A 96.226 53 2 0 3632 3684 106164253 106164201 2.260000e-13 87.9
32 TraesCS5D01G513500 chr5A 88.158 76 5 3 570 643 376996365 376996438 2.260000e-13 87.9
33 TraesCS5D01G513500 chr5A 88.000 75 6 3 570 643 14848845 14848773 8.140000e-13 86.1
34 TraesCS5D01G513500 chr5A 95.238 42 2 0 1872 1913 635552389 635552430 2.950000e-07 67.6
35 TraesCS5D01G513500 chr2B 89.445 919 61 19 1913 2797 10727270 10728186 0.000000e+00 1127.0
36 TraesCS5D01G513500 chr2B 85.077 784 83 15 913 1679 10726121 10726887 0.000000e+00 769.0
37 TraesCS5D01G513500 chr2B 87.611 113 9 2 1678 1790 10727090 10727197 4.800000e-25 126.0
38 TraesCS5D01G513500 chr2B 87.379 103 11 2 441 541 402519585 402519483 2.890000e-22 117.0
39 TraesCS5D01G513500 chr2B 83.929 112 16 2 430 539 263826269 263826158 6.250000e-19 106.0
40 TraesCS5D01G513500 chr2B 100.000 35 0 0 2829 2863 10728185 10728219 1.060000e-06 65.8
41 TraesCS5D01G513500 chr2B 87.273 55 7 0 1862 1916 679898296 679898350 3.820000e-06 63.9
42 TraesCS5D01G513500 chr2B 100.000 28 0 0 1835 1862 679898249 679898276 8.000000e-03 52.8
43 TraesCS5D01G513500 chr7D 87.665 454 37 13 1222 1663 366418212 366417766 1.130000e-140 510.0
44 TraesCS5D01G513500 chr7D 87.140 451 41 12 1220 1659 158431803 158431359 3.170000e-136 496.0
45 TraesCS5D01G513500 chr7D 83.333 126 16 3 447 570 80707407 80707285 1.340000e-20 111.0
46 TraesCS5D01G513500 chrUn 86.842 456 41 14 1220 1663 220535003 220534555 4.110000e-135 492.0
47 TraesCS5D01G513500 chrUn 86.404 456 43 14 1220 1663 374993377 374993825 8.890000e-132 481.0
48 TraesCS5D01G513500 chr7A 86.842 456 41 14 1220 1663 171843973 171844421 4.110000e-135 492.0
49 TraesCS5D01G513500 chr7A 83.594 128 17 3 445 570 608895192 608895317 2.890000e-22 117.0
50 TraesCS5D01G513500 chr7B 80.822 146 22 6 429 570 48856281 48856138 4.830000e-20 110.0
51 TraesCS5D01G513500 chr7B 83.193 119 19 1 445 562 580666455 580666573 1.740000e-19 108.0
52 TraesCS5D01G513500 chr7B 83.168 101 11 4 440 539 595746434 595746529 2.260000e-13 87.9
53 TraesCS5D01G513500 chr3B 90.361 83 4 2 561 643 367648517 367648595 6.250000e-19 106.0
54 TraesCS5D01G513500 chr6A 81.667 120 17 5 445 562 3550636 3550520 1.350000e-15 95.3
55 TraesCS5D01G513500 chr3A 89.333 75 7 1 570 643 7485038 7485112 4.870000e-15 93.5
56 TraesCS5D01G513500 chr6B 86.842 76 6 3 570 643 239370272 239370199 1.050000e-11 82.4
57 TraesCS5D01G513500 chr6B 100.000 28 0 0 1887 1914 555856426 555856399 8.000000e-03 52.8
58 TraesCS5D01G513500 chr2A 87.013 77 3 4 570 643 74793863 74793935 3.790000e-11 80.5
59 TraesCS5D01G513500 chr2A 87.273 55 7 0 1862 1916 706752951 706753005 3.820000e-06 63.9
60 TraesCS5D01G513500 chr2A 100.000 28 0 0 1835 1862 706752904 706752931 8.000000e-03 52.8
61 TraesCS5D01G513500 chr4D 93.023 43 3 0 1872 1914 52754966 52755008 3.820000e-06 63.9
62 TraesCS5D01G513500 chr2D 87.273 55 7 0 1862 1916 566989048 566989102 3.820000e-06 63.9
63 TraesCS5D01G513500 chr3D 100.000 30 0 0 1887 1916 524715655 524715626 6.390000e-04 56.5
64 TraesCS5D01G513500 chr1A 100.000 28 0 0 1835 1862 511308231 511308204 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G513500 chr5D 537657494 537662062 4568 True 8438.000000 8438 100.000000 1 4569 1 chr5D.!!$R1 4568
1 TraesCS5D01G513500 chr5D 97576242 97579921 3679 False 581.483333 1526 90.672167 907 4146 6 chr5D.!!$F1 3239
2 TraesCS5D01G513500 chr4A 631901105 631904820 3715 True 2478.000000 3775 90.651500 866 4566 2 chr4A.!!$R2 3700
3 TraesCS5D01G513500 chr4A 58786955 58789149 2194 True 606.333333 998 87.727667 913 2912 3 chr4A.!!$R1 1999
4 TraesCS5D01G513500 chr5B 678314455 678318440 3985 True 1120.000000 2525 88.688000 651 4552 4 chr5B.!!$R4 3901
5 TraesCS5D01G513500 chr5B 106950506 106953647 3141 False 972.000000 1325 90.525333 908 3684 3 chr5B.!!$F2 2776
6 TraesCS5D01G513500 chr5B 105537127 105540553 3426 True 678.680000 2357 87.885600 921 4146 5 chr5B.!!$R3 3225
7 TraesCS5D01G513500 chr5A 106164201 106167402 3201 True 777.725000 1476 92.330000 907 3684 4 chr5A.!!$R2 2777
8 TraesCS5D01G513500 chr2B 10726121 10728219 2098 False 521.950000 1127 90.533250 913 2863 4 chr2B.!!$F1 1950

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
247 248 0.034767 ATGGCCACTGTGACTCCATG 60.035 55.0 8.16 2.14 36.29 3.66 F
643 644 0.036388 ATTTTGCTTCCGCGAGAGGA 60.036 50.0 8.23 2.69 39.65 3.71 F
2210 2678 0.033699 AGGGGCTGGAGCTCAAAATC 60.034 55.0 17.19 0.00 45.20 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1513 1637 0.613260 AATCGCACAACCTCTGGCTA 59.387 50.000 0.0 0.0 0.0 3.93 R
2629 3142 1.927174 CAGCAACTACAGATACGCCAC 59.073 52.381 0.0 0.0 0.0 5.01 R
4048 5262 0.250513 TGCCTGTGTGTGTGTGTGTA 59.749 50.000 0.0 0.0 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.993449 GAACGACGAACCTCTCTTCT 57.007 50.000 0.00 0.00 0.00 2.85
20 21 3.285816 GAACGACGAACCTCTCTTCTT 57.714 47.619 0.00 0.00 0.00 2.52
21 22 2.993449 ACGACGAACCTCTCTTCTTC 57.007 50.000 0.00 0.00 0.00 2.87
22 23 2.506444 ACGACGAACCTCTCTTCTTCT 58.494 47.619 0.00 0.00 0.00 2.85
23 24 2.885894 ACGACGAACCTCTCTTCTTCTT 59.114 45.455 0.00 0.00 0.00 2.52
24 25 3.318557 ACGACGAACCTCTCTTCTTCTTT 59.681 43.478 0.00 0.00 0.00 2.52
25 26 3.670991 CGACGAACCTCTCTTCTTCTTTG 59.329 47.826 0.00 0.00 0.00 2.77
26 27 3.394719 ACGAACCTCTCTTCTTCTTTGC 58.605 45.455 0.00 0.00 0.00 3.68
27 28 2.410053 CGAACCTCTCTTCTTCTTTGCG 59.590 50.000 0.00 0.00 0.00 4.85
28 29 3.394719 GAACCTCTCTTCTTCTTTGCGT 58.605 45.455 0.00 0.00 0.00 5.24
29 30 3.033368 ACCTCTCTTCTTCTTTGCGTC 57.967 47.619 0.00 0.00 0.00 5.19
30 31 2.630580 ACCTCTCTTCTTCTTTGCGTCT 59.369 45.455 0.00 0.00 0.00 4.18
31 32 2.992543 CCTCTCTTCTTCTTTGCGTCTG 59.007 50.000 0.00 0.00 0.00 3.51
32 33 3.553922 CCTCTCTTCTTCTTTGCGTCTGT 60.554 47.826 0.00 0.00 0.00 3.41
33 34 4.321304 CCTCTCTTCTTCTTTGCGTCTGTA 60.321 45.833 0.00 0.00 0.00 2.74
34 35 5.392767 TCTCTTCTTCTTTGCGTCTGTAT 57.607 39.130 0.00 0.00 0.00 2.29
35 36 5.403246 TCTCTTCTTCTTTGCGTCTGTATC 58.597 41.667 0.00 0.00 0.00 2.24
36 37 4.166523 TCTTCTTCTTTGCGTCTGTATCG 58.833 43.478 0.00 0.00 0.00 2.92
37 38 3.842732 TCTTCTTTGCGTCTGTATCGA 57.157 42.857 0.00 0.00 0.00 3.59
38 39 3.759418 TCTTCTTTGCGTCTGTATCGAG 58.241 45.455 0.00 0.00 0.00 4.04
39 40 3.190744 TCTTCTTTGCGTCTGTATCGAGT 59.809 43.478 0.00 0.00 0.00 4.18
40 41 4.393990 TCTTCTTTGCGTCTGTATCGAGTA 59.606 41.667 0.00 0.00 0.00 2.59
41 42 4.895224 TCTTTGCGTCTGTATCGAGTAT 57.105 40.909 0.00 0.00 0.00 2.12
42 43 4.598062 TCTTTGCGTCTGTATCGAGTATG 58.402 43.478 0.00 0.00 0.00 2.39
43 44 2.401017 TGCGTCTGTATCGAGTATGC 57.599 50.000 0.00 0.00 0.00 3.14
44 45 1.319172 GCGTCTGTATCGAGTATGCG 58.681 55.000 0.00 0.00 0.00 4.73
45 46 1.951792 CGTCTGTATCGAGTATGCGG 58.048 55.000 0.00 0.00 0.00 5.69
46 47 1.687628 GTCTGTATCGAGTATGCGGC 58.312 55.000 0.00 0.00 0.00 6.53
47 48 1.267261 GTCTGTATCGAGTATGCGGCT 59.733 52.381 0.00 0.00 0.00 5.52
48 49 1.535896 TCTGTATCGAGTATGCGGCTC 59.464 52.381 0.00 0.00 0.00 4.70
49 50 0.596577 TGTATCGAGTATGCGGCTCC 59.403 55.000 0.00 0.00 0.00 4.70
50 51 0.596577 GTATCGAGTATGCGGCTCCA 59.403 55.000 0.00 0.00 0.00 3.86
51 52 1.000607 GTATCGAGTATGCGGCTCCAA 60.001 52.381 0.00 0.00 0.00 3.53
52 53 0.249489 ATCGAGTATGCGGCTCCAAC 60.249 55.000 0.00 0.00 0.00 3.77
53 54 1.141881 CGAGTATGCGGCTCCAACT 59.858 57.895 0.00 0.00 0.00 3.16
54 55 1.148157 CGAGTATGCGGCTCCAACTG 61.148 60.000 0.00 0.00 0.00 3.16
55 56 1.432270 GAGTATGCGGCTCCAACTGC 61.432 60.000 0.00 0.00 42.55 4.40
56 57 2.511373 TATGCGGCTCCAACTGCG 60.511 61.111 0.00 0.00 45.31 5.18
63 64 2.571757 CTCCAACTGCGGCGAGTA 59.428 61.111 12.98 0.00 0.00 2.59
64 65 1.517257 CTCCAACTGCGGCGAGTAG 60.517 63.158 12.98 7.97 38.61 2.57
68 69 2.432628 ACTGCGGCGAGTAGTTGC 60.433 61.111 12.98 0.59 43.39 4.17
73 74 2.978824 GGCGAGTAGTTGCCCTCA 59.021 61.111 17.18 0.00 46.79 3.86
74 75 1.295423 GGCGAGTAGTTGCCCTCAA 59.705 57.895 17.18 0.00 46.79 3.02
75 76 0.321298 GGCGAGTAGTTGCCCTCAAA 60.321 55.000 17.18 0.00 46.79 2.69
76 77 1.679032 GGCGAGTAGTTGCCCTCAAAT 60.679 52.381 17.18 0.00 46.79 2.32
77 78 2.084546 GCGAGTAGTTGCCCTCAAATT 58.915 47.619 0.00 0.00 33.37 1.82
78 79 2.488153 GCGAGTAGTTGCCCTCAAATTT 59.512 45.455 0.00 0.00 33.37 1.82
79 80 3.057526 GCGAGTAGTTGCCCTCAAATTTT 60.058 43.478 0.00 0.00 33.37 1.82
80 81 4.558697 GCGAGTAGTTGCCCTCAAATTTTT 60.559 41.667 0.00 0.00 33.37 1.94
81 82 5.154222 CGAGTAGTTGCCCTCAAATTTTTC 58.846 41.667 0.00 0.00 33.37 2.29
82 83 5.121221 AGTAGTTGCCCTCAAATTTTTCG 57.879 39.130 0.00 0.00 33.37 3.46
83 84 4.583073 AGTAGTTGCCCTCAAATTTTTCGT 59.417 37.500 0.00 0.00 33.37 3.85
84 85 3.977427 AGTTGCCCTCAAATTTTTCGTC 58.023 40.909 0.00 0.00 33.37 4.20
85 86 3.057019 GTTGCCCTCAAATTTTTCGTCC 58.943 45.455 0.00 0.00 33.37 4.79
86 87 2.593026 TGCCCTCAAATTTTTCGTCCT 58.407 42.857 0.00 0.00 0.00 3.85
87 88 2.556622 TGCCCTCAAATTTTTCGTCCTC 59.443 45.455 0.00 0.00 0.00 3.71
88 89 2.414161 GCCCTCAAATTTTTCGTCCTCG 60.414 50.000 0.00 0.00 38.55 4.63
89 90 2.414161 CCCTCAAATTTTTCGTCCTCGC 60.414 50.000 0.00 0.00 36.96 5.03
90 91 2.495939 CTCAAATTTTTCGTCCTCGCG 58.504 47.619 0.00 0.00 36.96 5.87
91 92 1.195900 TCAAATTTTTCGTCCTCGCGG 59.804 47.619 6.13 0.00 36.96 6.46
92 93 0.519961 AAATTTTTCGTCCTCGCGGG 59.480 50.000 6.13 0.59 36.96 6.13
93 94 1.918868 AATTTTTCGTCCTCGCGGGC 61.919 55.000 6.13 2.35 36.96 6.13
108 109 4.839706 GGCGCCCCCATTGTGGAT 62.840 66.667 18.11 0.00 40.96 3.41
109 110 3.219198 GCGCCCCCATTGTGGATC 61.219 66.667 0.00 0.00 40.96 3.36
110 111 2.275089 CGCCCCCATTGTGGATCA 59.725 61.111 0.00 0.00 40.96 2.92
111 112 1.152694 CGCCCCCATTGTGGATCAT 60.153 57.895 0.00 0.00 40.96 2.45
112 113 1.457823 CGCCCCCATTGTGGATCATG 61.458 60.000 0.00 0.00 40.96 3.07
113 114 0.397535 GCCCCCATTGTGGATCATGT 60.398 55.000 0.00 0.00 40.96 3.21
114 115 1.966295 GCCCCCATTGTGGATCATGTT 60.966 52.381 0.00 0.00 40.96 2.71
115 116 2.034124 CCCCCATTGTGGATCATGTTC 58.966 52.381 0.00 0.00 40.96 3.18
116 117 2.623765 CCCCCATTGTGGATCATGTTCA 60.624 50.000 6.14 0.00 40.96 3.18
117 118 2.428171 CCCCATTGTGGATCATGTTCAC 59.572 50.000 6.14 7.33 40.96 3.18
118 119 2.428171 CCCATTGTGGATCATGTTCACC 59.572 50.000 6.14 0.67 40.96 4.02
119 120 3.090790 CCATTGTGGATCATGTTCACCA 58.909 45.455 6.14 3.08 40.96 4.17
120 121 3.702548 CCATTGTGGATCATGTTCACCAT 59.297 43.478 6.14 2.42 40.96 3.55
121 122 4.202080 CCATTGTGGATCATGTTCACCATC 60.202 45.833 6.14 0.00 40.96 3.51
122 123 2.631267 TGTGGATCATGTTCACCATCG 58.369 47.619 6.14 0.00 34.87 3.84
123 124 1.331756 GTGGATCATGTTCACCATCGC 59.668 52.381 6.14 0.00 34.87 4.58
124 125 0.947244 GGATCATGTTCACCATCGCC 59.053 55.000 6.14 0.00 0.00 5.54
125 126 1.475751 GGATCATGTTCACCATCGCCT 60.476 52.381 6.14 0.00 0.00 5.52
126 127 1.869767 GATCATGTTCACCATCGCCTC 59.130 52.381 0.00 0.00 0.00 4.70
127 128 0.612744 TCATGTTCACCATCGCCTCA 59.387 50.000 0.00 0.00 0.00 3.86
128 129 1.210234 TCATGTTCACCATCGCCTCAT 59.790 47.619 0.00 0.00 0.00 2.90
129 130 1.600957 CATGTTCACCATCGCCTCATC 59.399 52.381 0.00 0.00 0.00 2.92
130 131 0.460109 TGTTCACCATCGCCTCATCG 60.460 55.000 0.00 0.00 0.00 3.84
131 132 1.143838 TTCACCATCGCCTCATCGG 59.856 57.895 0.00 0.00 0.00 4.18
132 133 1.613317 TTCACCATCGCCTCATCGGT 61.613 55.000 0.00 0.00 34.25 4.69
133 134 1.884464 CACCATCGCCTCATCGGTG 60.884 63.158 0.00 0.00 44.95 4.94
139 140 4.554036 GCCTCATCGGTGGCCTCC 62.554 72.222 14.20 14.20 45.75 4.30
140 141 2.765807 CCTCATCGGTGGCCTCCT 60.766 66.667 21.24 0.68 0.00 3.69
141 142 2.370445 CCTCATCGGTGGCCTCCTT 61.370 63.158 21.24 6.33 0.00 3.36
142 143 1.144936 CTCATCGGTGGCCTCCTTC 59.855 63.158 21.24 0.00 0.00 3.46
143 144 2.190578 CATCGGTGGCCTCCTTCC 59.809 66.667 21.24 6.82 0.00 3.46
144 145 2.285368 ATCGGTGGCCTCCTTCCA 60.285 61.111 21.24 3.45 0.00 3.53
145 146 2.370445 ATCGGTGGCCTCCTTCCAG 61.370 63.158 21.24 5.85 33.63 3.86
146 147 4.785453 CGGTGGCCTCCTTCCAGC 62.785 72.222 21.24 0.00 45.79 4.85
147 148 3.334054 GGTGGCCTCCTTCCAGCT 61.334 66.667 16.91 0.00 45.78 4.24
148 149 2.759795 GTGGCCTCCTTCCAGCTT 59.240 61.111 3.32 0.00 33.63 3.74
149 150 1.676967 GTGGCCTCCTTCCAGCTTG 60.677 63.158 3.32 0.00 33.63 4.01
150 151 2.044551 GGCCTCCTTCCAGCTTGG 60.045 66.667 0.00 0.00 39.43 3.61
151 152 2.044551 GCCTCCTTCCAGCTTGGG 60.045 66.667 2.86 0.00 38.32 4.12
152 153 2.679716 CCTCCTTCCAGCTTGGGG 59.320 66.667 2.86 0.00 38.32 4.96
153 154 2.679716 CTCCTTCCAGCTTGGGGG 59.320 66.667 2.86 5.85 38.32 5.40
154 155 1.925455 CTCCTTCCAGCTTGGGGGA 60.925 63.158 12.87 12.87 38.32 4.81
155 156 1.919600 CTCCTTCCAGCTTGGGGGAG 61.920 65.000 19.35 19.35 44.52 4.30
156 157 2.679716 CTTCCAGCTTGGGGGAGG 59.320 66.667 2.86 0.00 38.32 4.30
157 158 3.651980 CTTCCAGCTTGGGGGAGGC 62.652 68.421 2.86 0.00 38.32 4.70
159 160 3.747579 CCAGCTTGGGGGAGGCAT 61.748 66.667 0.00 0.00 32.67 4.40
160 161 2.361771 CAGCTTGGGGGAGGCATT 59.638 61.111 0.00 0.00 0.00 3.56
161 162 1.755783 CAGCTTGGGGGAGGCATTC 60.756 63.158 0.00 0.00 0.00 2.67
162 163 1.932757 AGCTTGGGGGAGGCATTCT 60.933 57.895 0.00 0.00 0.00 2.40
163 164 1.000866 GCTTGGGGGAGGCATTCTT 59.999 57.895 0.00 0.00 0.00 2.52
164 165 1.039785 GCTTGGGGGAGGCATTCTTC 61.040 60.000 0.00 0.00 0.00 2.87
165 166 0.396278 CTTGGGGGAGGCATTCTTCC 60.396 60.000 0.00 0.00 40.64 3.46
166 167 2.193248 GGGGGAGGCATTCTTCCG 59.807 66.667 0.00 0.00 42.41 4.30
167 168 2.375345 GGGGGAGGCATTCTTCCGA 61.375 63.158 0.00 0.00 42.41 4.55
168 169 1.607612 GGGGAGGCATTCTTCCGAA 59.392 57.895 0.00 0.00 42.41 4.30
169 170 0.748367 GGGGAGGCATTCTTCCGAAC 60.748 60.000 0.00 0.00 42.41 3.95
170 171 0.035439 GGGAGGCATTCTTCCGAACA 60.035 55.000 0.00 0.00 29.94 3.18
171 172 1.373570 GGAGGCATTCTTCCGAACAG 58.626 55.000 0.00 0.00 30.67 3.16
172 173 1.339151 GGAGGCATTCTTCCGAACAGT 60.339 52.381 0.00 0.00 30.67 3.55
173 174 1.734465 GAGGCATTCTTCCGAACAGTG 59.266 52.381 0.00 0.00 30.67 3.66
174 175 1.347707 AGGCATTCTTCCGAACAGTGA 59.652 47.619 0.00 0.00 30.67 3.41
175 176 2.026822 AGGCATTCTTCCGAACAGTGAT 60.027 45.455 0.00 0.00 30.67 3.06
176 177 2.352960 GGCATTCTTCCGAACAGTGATC 59.647 50.000 0.00 0.00 30.67 2.92
177 178 2.029728 GCATTCTTCCGAACAGTGATCG 59.970 50.000 15.22 15.22 39.92 3.69
178 179 3.511699 CATTCTTCCGAACAGTGATCGA 58.488 45.455 22.72 7.47 42.76 3.59
179 180 2.921634 TCTTCCGAACAGTGATCGAG 57.078 50.000 22.72 13.50 42.76 4.04
180 181 1.472878 TCTTCCGAACAGTGATCGAGG 59.527 52.381 22.72 12.26 42.76 4.63
181 182 1.472878 CTTCCGAACAGTGATCGAGGA 59.527 52.381 22.72 10.46 42.76 3.71
182 183 1.095600 TCCGAACAGTGATCGAGGAG 58.904 55.000 22.72 7.32 42.76 3.69
183 184 0.526524 CCGAACAGTGATCGAGGAGC 60.527 60.000 22.72 0.00 42.76 4.70
184 185 0.863538 CGAACAGTGATCGAGGAGCG 60.864 60.000 17.00 0.00 42.76 5.03
185 186 1.142778 GAACAGTGATCGAGGAGCGC 61.143 60.000 0.00 0.00 40.61 5.92
186 187 2.279120 CAGTGATCGAGGAGCGCC 60.279 66.667 2.29 0.00 40.61 6.53
187 188 3.893763 AGTGATCGAGGAGCGCCG 61.894 66.667 2.29 0.00 40.61 6.46
188 189 4.933064 GTGATCGAGGAGCGCCGG 62.933 72.222 2.29 0.00 40.61 6.13
190 191 4.632458 GATCGAGGAGCGCCGGAC 62.632 72.222 5.05 0.00 40.61 4.79
202 203 4.194720 CCGGACGAGGGCTCTTCG 62.195 72.222 0.00 0.00 0.00 3.79
203 204 4.194720 CGGACGAGGGCTCTTCGG 62.195 72.222 9.68 0.00 0.00 4.30
204 205 2.754658 GGACGAGGGCTCTTCGGA 60.755 66.667 9.68 0.00 0.00 4.55
205 206 2.490685 GACGAGGGCTCTTCGGAC 59.509 66.667 9.68 1.37 0.00 4.79
206 207 3.398353 GACGAGGGCTCTTCGGACG 62.398 68.421 9.68 0.55 0.00 4.79
207 208 4.194720 CGAGGGCTCTTCGGACGG 62.195 72.222 0.00 0.00 0.00 4.79
208 209 2.754658 GAGGGCTCTTCGGACGGA 60.755 66.667 0.00 0.00 0.00 4.69
209 210 2.283676 AGGGCTCTTCGGACGGAA 60.284 61.111 0.00 0.00 0.00 4.30
210 211 1.885163 GAGGGCTCTTCGGACGGAAA 61.885 60.000 0.00 0.00 33.34 3.13
211 212 1.740664 GGGCTCTTCGGACGGAAAC 60.741 63.158 0.00 0.00 33.34 2.78
212 213 1.740664 GGCTCTTCGGACGGAAACC 60.741 63.158 0.00 0.00 33.34 3.27
229 230 3.900892 CGTGGGCGGACGAGCTAT 61.901 66.667 1.76 0.00 42.10 2.97
230 231 2.279517 GTGGGCGGACGAGCTATG 60.280 66.667 0.00 0.00 37.29 2.23
231 232 3.536917 TGGGCGGACGAGCTATGG 61.537 66.667 0.00 0.00 37.29 2.74
232 233 4.971125 GGGCGGACGAGCTATGGC 62.971 72.222 0.00 0.00 37.29 4.40
233 234 4.971125 GGCGGACGAGCTATGGCC 62.971 72.222 0.00 0.00 39.73 5.36
234 235 4.221422 GCGGACGAGCTATGGCCA 62.221 66.667 8.56 8.56 39.73 5.36
235 236 2.279517 CGGACGAGCTATGGCCAC 60.280 66.667 8.16 0.00 39.73 5.01
236 237 2.786495 CGGACGAGCTATGGCCACT 61.786 63.158 8.16 0.00 39.73 4.00
237 238 1.227380 GGACGAGCTATGGCCACTG 60.227 63.158 8.16 4.72 39.73 3.66
238 239 1.517832 GACGAGCTATGGCCACTGT 59.482 57.895 8.16 0.00 39.73 3.55
239 240 0.807667 GACGAGCTATGGCCACTGTG 60.808 60.000 8.16 0.00 39.73 3.66
240 241 1.257750 ACGAGCTATGGCCACTGTGA 61.258 55.000 8.16 0.00 39.73 3.58
241 242 0.807667 CGAGCTATGGCCACTGTGAC 60.808 60.000 8.16 0.00 39.73 3.67
242 243 0.539051 GAGCTATGGCCACTGTGACT 59.461 55.000 8.16 0.00 39.73 3.41
243 244 0.539051 AGCTATGGCCACTGTGACTC 59.461 55.000 8.16 0.00 39.73 3.36
244 245 0.462759 GCTATGGCCACTGTGACTCC 60.463 60.000 8.16 7.93 0.00 3.85
245 246 0.904649 CTATGGCCACTGTGACTCCA 59.095 55.000 8.16 13.18 0.00 3.86
246 247 1.487976 CTATGGCCACTGTGACTCCAT 59.512 52.381 22.77 22.77 40.35 3.41
247 248 0.034767 ATGGCCACTGTGACTCCATG 60.035 55.000 8.16 2.14 36.29 3.66
248 249 1.126948 TGGCCACTGTGACTCCATGA 61.127 55.000 9.86 0.00 0.00 3.07
249 250 0.036732 GGCCACTGTGACTCCATGAA 59.963 55.000 9.86 0.00 0.00 2.57
250 251 1.160137 GCCACTGTGACTCCATGAAC 58.840 55.000 9.86 0.00 0.00 3.18
251 252 1.543208 GCCACTGTGACTCCATGAACA 60.543 52.381 9.86 0.00 0.00 3.18
252 253 2.849942 CCACTGTGACTCCATGAACAA 58.150 47.619 9.86 0.00 0.00 2.83
253 254 2.810274 CCACTGTGACTCCATGAACAAG 59.190 50.000 9.86 0.00 0.00 3.16
254 255 3.470709 CACTGTGACTCCATGAACAAGT 58.529 45.455 0.32 0.00 0.00 3.16
255 256 4.503123 CCACTGTGACTCCATGAACAAGTA 60.503 45.833 9.86 0.00 0.00 2.24
256 257 4.449068 CACTGTGACTCCATGAACAAGTAC 59.551 45.833 0.32 0.00 0.00 2.73
257 258 4.345257 ACTGTGACTCCATGAACAAGTACT 59.655 41.667 0.00 0.00 0.00 2.73
258 259 5.163301 ACTGTGACTCCATGAACAAGTACTT 60.163 40.000 1.12 1.12 0.00 2.24
259 260 6.041637 ACTGTGACTCCATGAACAAGTACTTA 59.958 38.462 8.04 0.00 0.00 2.24
260 261 6.455647 TGTGACTCCATGAACAAGTACTTAG 58.544 40.000 8.04 5.71 0.00 2.18
261 262 6.041637 TGTGACTCCATGAACAAGTACTTAGT 59.958 38.462 8.04 5.46 0.00 2.24
262 263 6.366332 GTGACTCCATGAACAAGTACTTAGTG 59.634 42.308 8.04 0.00 0.00 2.74
263 264 6.041637 TGACTCCATGAACAAGTACTTAGTGT 59.958 38.462 8.04 0.00 0.00 3.55
264 265 6.827727 ACTCCATGAACAAGTACTTAGTGTT 58.172 36.000 8.04 9.47 38.17 3.32
265 266 6.706270 ACTCCATGAACAAGTACTTAGTGTTG 59.294 38.462 14.59 7.77 35.67 3.33
266 267 6.822442 TCCATGAACAAGTACTTAGTGTTGA 58.178 36.000 14.59 8.08 35.67 3.18
267 268 6.929049 TCCATGAACAAGTACTTAGTGTTGAG 59.071 38.462 14.59 5.81 35.67 3.02
268 269 6.147821 CCATGAACAAGTACTTAGTGTTGAGG 59.852 42.308 14.59 9.01 35.67 3.86
269 270 6.229936 TGAACAAGTACTTAGTGTTGAGGT 57.770 37.500 14.59 0.59 35.67 3.85
270 271 6.278363 TGAACAAGTACTTAGTGTTGAGGTC 58.722 40.000 14.59 6.34 35.67 3.85
271 272 4.868067 ACAAGTACTTAGTGTTGAGGTCG 58.132 43.478 8.04 0.00 0.00 4.79
272 273 4.581824 ACAAGTACTTAGTGTTGAGGTCGA 59.418 41.667 8.04 0.00 0.00 4.20
273 274 4.762956 AGTACTTAGTGTTGAGGTCGAC 57.237 45.455 7.13 7.13 0.00 4.20
274 275 2.701073 ACTTAGTGTTGAGGTCGACG 57.299 50.000 9.92 0.00 32.90 5.12
275 276 2.224606 ACTTAGTGTTGAGGTCGACGA 58.775 47.619 9.92 0.00 32.90 4.20
276 277 2.031333 ACTTAGTGTTGAGGTCGACGAC 60.031 50.000 19.70 19.70 32.90 4.34
277 278 1.596603 TAGTGTTGAGGTCGACGACA 58.403 50.000 27.77 9.25 33.68 4.35
278 279 0.959553 AGTGTTGAGGTCGACGACAT 59.040 50.000 27.77 22.52 34.73 3.06
279 280 2.156917 AGTGTTGAGGTCGACGACATA 58.843 47.619 27.77 11.55 34.73 2.29
280 281 2.095364 AGTGTTGAGGTCGACGACATAC 60.095 50.000 27.77 17.63 34.73 2.39
282 283 1.129251 GTTGAGGTCGACGACATACGA 59.871 52.381 27.77 15.13 45.77 3.43
287 288 2.153039 TCGACGACATACGACACGT 58.847 52.632 0.00 1.91 45.77 4.49
288 289 0.179243 TCGACGACATACGACACGTG 60.179 55.000 15.48 15.48 45.77 4.49
289 290 0.451628 CGACGACATACGACACGTGT 60.452 55.000 23.64 23.64 45.77 4.49
290 291 1.678360 GACGACATACGACACGTGTT 58.322 50.000 24.26 10.64 45.77 3.32
291 292 1.381100 GACGACATACGACACGTGTTG 59.619 52.381 30.17 30.17 45.77 3.33
292 293 1.268692 ACGACATACGACACGTGTTGT 60.269 47.619 36.60 36.60 45.77 3.32
293 294 1.782569 CGACATACGACACGTGTTGTT 59.217 47.619 38.77 25.33 45.77 2.83
294 295 2.160195 CGACATACGACACGTGTTGTTC 60.160 50.000 38.77 29.46 45.77 3.18
295 296 3.047796 GACATACGACACGTGTTGTTCT 58.952 45.455 38.77 26.09 42.36 3.01
296 297 3.047796 ACATACGACACGTGTTGTTCTC 58.952 45.455 38.77 18.19 42.36 2.87
297 298 3.243301 ACATACGACACGTGTTGTTCTCT 60.243 43.478 38.77 21.84 42.36 3.10
298 299 4.023792 ACATACGACACGTGTTGTTCTCTA 60.024 41.667 38.77 24.70 42.36 2.43
299 300 2.996155 ACGACACGTGTTGTTCTCTAG 58.004 47.619 31.50 13.12 39.53 2.43
300 301 2.287427 ACGACACGTGTTGTTCTCTAGG 60.287 50.000 31.50 10.19 39.53 3.02
301 302 2.059541 GACACGTGTTGTTCTCTAGGC 58.940 52.381 24.26 0.85 39.17 3.93
302 303 1.060713 CACGTGTTGTTCTCTAGGCG 58.939 55.000 7.58 0.00 0.00 5.52
303 304 0.666577 ACGTGTTGTTCTCTAGGCGC 60.667 55.000 0.00 0.00 0.00 6.53
304 305 0.388649 CGTGTTGTTCTCTAGGCGCT 60.389 55.000 7.64 0.00 0.00 5.92
305 306 1.351153 GTGTTGTTCTCTAGGCGCTC 58.649 55.000 7.64 0.00 0.00 5.03
306 307 0.246635 TGTTGTTCTCTAGGCGCTCC 59.753 55.000 7.64 0.00 0.00 4.70
307 308 0.460459 GTTGTTCTCTAGGCGCTCCC 60.460 60.000 7.64 0.00 0.00 4.30
309 310 1.038130 TGTTCTCTAGGCGCTCCCTC 61.038 60.000 7.64 0.00 44.96 4.30
310 311 1.455959 TTCTCTAGGCGCTCCCTCC 60.456 63.158 7.64 0.00 44.96 4.30
311 312 3.291383 CTCTAGGCGCTCCCTCCG 61.291 72.222 7.64 0.00 44.96 4.63
312 313 3.776347 CTCTAGGCGCTCCCTCCGA 62.776 68.421 7.64 0.00 44.96 4.55
313 314 2.598985 CTAGGCGCTCCCTCCGAT 60.599 66.667 7.64 0.00 44.96 4.18
314 315 2.123425 TAGGCGCTCCCTCCGATT 60.123 61.111 7.64 0.00 44.96 3.34
315 316 1.749334 CTAGGCGCTCCCTCCGATTT 61.749 60.000 7.64 0.00 44.96 2.17
316 317 1.335132 TAGGCGCTCCCTCCGATTTT 61.335 55.000 7.64 0.00 44.96 1.82
317 318 1.749258 GGCGCTCCCTCCGATTTTT 60.749 57.895 7.64 0.00 0.00 1.94
336 337 2.402640 TTTTATTTTTCCGCACGCGT 57.597 40.000 5.58 5.58 37.81 6.01
337 338 2.402640 TTTATTTTTCCGCACGCGTT 57.597 40.000 10.22 0.00 37.81 4.84
338 339 2.402640 TTATTTTTCCGCACGCGTTT 57.597 40.000 10.22 0.00 37.81 3.60
339 340 2.402640 TATTTTTCCGCACGCGTTTT 57.597 40.000 10.22 0.00 37.81 2.43
340 341 1.125270 ATTTTTCCGCACGCGTTTTC 58.875 45.000 10.22 0.04 37.81 2.29
342 343 2.968330 TTTTCCGCACGCGTTTTCGG 62.968 55.000 28.08 28.08 44.29 4.30
345 346 4.659874 CGCACGCGTTTTCGGCTT 62.660 61.111 10.22 0.00 44.29 4.35
346 347 2.353030 GCACGCGTTTTCGGCTTT 60.353 55.556 10.22 0.00 44.29 3.51
347 348 1.942223 GCACGCGTTTTCGGCTTTT 60.942 52.632 10.22 0.00 44.29 2.27
348 349 1.476235 GCACGCGTTTTCGGCTTTTT 61.476 50.000 10.22 0.00 44.29 1.94
349 350 1.744374 CACGCGTTTTCGGCTTTTTA 58.256 45.000 10.22 0.00 44.29 1.52
350 351 1.706597 CACGCGTTTTCGGCTTTTTAG 59.293 47.619 10.22 0.00 44.29 1.85
351 352 1.598601 ACGCGTTTTCGGCTTTTTAGA 59.401 42.857 5.58 0.00 44.29 2.10
352 353 2.224784 ACGCGTTTTCGGCTTTTTAGAT 59.775 40.909 5.58 0.00 44.29 1.98
353 354 2.588106 CGCGTTTTCGGCTTTTTAGATG 59.412 45.455 0.00 0.00 44.29 2.90
354 355 2.914838 GCGTTTTCGGCTTTTTAGATGG 59.085 45.455 0.00 0.00 44.29 3.51
355 356 3.610821 GCGTTTTCGGCTTTTTAGATGGT 60.611 43.478 0.00 0.00 44.29 3.55
356 357 4.542735 CGTTTTCGGCTTTTTAGATGGTT 58.457 39.130 0.00 0.00 39.94 3.67
357 358 4.979815 CGTTTTCGGCTTTTTAGATGGTTT 59.020 37.500 0.00 0.00 39.94 3.27
358 359 5.460748 CGTTTTCGGCTTTTTAGATGGTTTT 59.539 36.000 0.00 0.00 39.94 2.43
359 360 6.019398 CGTTTTCGGCTTTTTAGATGGTTTTT 60.019 34.615 0.00 0.00 39.94 1.94
383 384 2.768833 GGTTTGTCACCGGTCTTTTC 57.231 50.000 2.59 0.00 35.12 2.29
384 385 2.294979 GGTTTGTCACCGGTCTTTTCT 58.705 47.619 2.59 0.00 35.12 2.52
385 386 3.469739 GGTTTGTCACCGGTCTTTTCTA 58.530 45.455 2.59 0.00 35.12 2.10
386 387 3.497262 GGTTTGTCACCGGTCTTTTCTAG 59.503 47.826 2.59 0.00 35.12 2.43
387 388 3.396260 TTGTCACCGGTCTTTTCTAGG 57.604 47.619 2.59 0.00 0.00 3.02
388 389 2.322658 TGTCACCGGTCTTTTCTAGGT 58.677 47.619 2.59 0.00 35.24 3.08
389 390 2.701951 TGTCACCGGTCTTTTCTAGGTT 59.298 45.455 2.59 0.00 32.04 3.50
390 391 3.135167 TGTCACCGGTCTTTTCTAGGTTT 59.865 43.478 2.59 0.00 32.04 3.27
391 392 4.132336 GTCACCGGTCTTTTCTAGGTTTT 58.868 43.478 2.59 0.00 32.04 2.43
392 393 4.212847 GTCACCGGTCTTTTCTAGGTTTTC 59.787 45.833 2.59 0.00 32.04 2.29
393 394 3.185797 CACCGGTCTTTTCTAGGTTTTCG 59.814 47.826 2.59 0.00 32.04 3.46
394 395 3.070015 ACCGGTCTTTTCTAGGTTTTCGA 59.930 43.478 0.00 0.00 0.00 3.71
395 396 3.431233 CCGGTCTTTTCTAGGTTTTCGAC 59.569 47.826 0.00 0.00 0.00 4.20
396 397 4.053295 CGGTCTTTTCTAGGTTTTCGACA 58.947 43.478 0.00 0.00 0.00 4.35
397 398 4.689345 CGGTCTTTTCTAGGTTTTCGACAT 59.311 41.667 0.00 0.00 0.00 3.06
398 399 5.178809 CGGTCTTTTCTAGGTTTTCGACATT 59.821 40.000 0.00 0.00 0.00 2.71
399 400 6.293244 CGGTCTTTTCTAGGTTTTCGACATTT 60.293 38.462 0.00 0.00 0.00 2.32
400 401 7.423199 GGTCTTTTCTAGGTTTTCGACATTTT 58.577 34.615 0.00 0.00 0.00 1.82
401 402 7.378728 GGTCTTTTCTAGGTTTTCGACATTTTG 59.621 37.037 0.00 0.00 0.00 2.44
402 403 7.913821 GTCTTTTCTAGGTTTTCGACATTTTGT 59.086 33.333 0.00 0.00 0.00 2.83
403 404 8.463607 TCTTTTCTAGGTTTTCGACATTTTGTT 58.536 29.630 0.00 0.00 0.00 2.83
404 405 8.989653 TTTTCTAGGTTTTCGACATTTTGTTT 57.010 26.923 0.00 0.00 0.00 2.83
405 406 8.989653 TTTCTAGGTTTTCGACATTTTGTTTT 57.010 26.923 0.00 0.00 0.00 2.43
406 407 7.979115 TCTAGGTTTTCGACATTTTGTTTTG 57.021 32.000 0.00 0.00 0.00 2.44
407 408 6.975772 TCTAGGTTTTCGACATTTTGTTTTGG 59.024 34.615 0.00 0.00 0.00 3.28
408 409 5.725362 AGGTTTTCGACATTTTGTTTTGGA 58.275 33.333 0.00 0.00 0.00 3.53
409 410 6.166982 AGGTTTTCGACATTTTGTTTTGGAA 58.833 32.000 0.00 0.00 0.00 3.53
410 411 6.651225 AGGTTTTCGACATTTTGTTTTGGAAA 59.349 30.769 0.00 0.00 0.00 3.13
411 412 7.173390 AGGTTTTCGACATTTTGTTTTGGAAAA 59.827 29.630 0.00 0.00 30.72 2.29
412 413 7.803659 GGTTTTCGACATTTTGTTTTGGAAAAA 59.196 29.630 0.00 0.00 32.78 1.94
468 469 3.887621 TTTCTTCCGTGAGAGGTATGG 57.112 47.619 0.00 0.00 0.00 2.74
469 470 1.112113 TCTTCCGTGAGAGGTATGGC 58.888 55.000 0.00 0.00 0.00 4.40
470 471 1.115467 CTTCCGTGAGAGGTATGGCT 58.885 55.000 0.00 0.00 0.00 4.75
471 472 1.482593 CTTCCGTGAGAGGTATGGCTT 59.517 52.381 0.00 0.00 0.00 4.35
472 473 1.568504 TCCGTGAGAGGTATGGCTTT 58.431 50.000 0.00 0.00 0.00 3.51
473 474 1.207089 TCCGTGAGAGGTATGGCTTTG 59.793 52.381 0.00 0.00 0.00 2.77
474 475 1.009829 CGTGAGAGGTATGGCTTTGC 58.990 55.000 0.00 0.00 0.00 3.68
475 476 1.406069 CGTGAGAGGTATGGCTTTGCT 60.406 52.381 0.00 0.00 0.00 3.91
476 477 2.716217 GTGAGAGGTATGGCTTTGCTT 58.284 47.619 0.00 0.00 0.00 3.91
477 478 3.084786 GTGAGAGGTATGGCTTTGCTTT 58.915 45.455 0.00 0.00 0.00 3.51
478 479 3.127721 GTGAGAGGTATGGCTTTGCTTTC 59.872 47.826 0.00 0.00 0.00 2.62
479 480 2.352960 GAGAGGTATGGCTTTGCTTTCG 59.647 50.000 0.00 0.00 0.00 3.46
480 481 0.811281 AGGTATGGCTTTGCTTTCGC 59.189 50.000 0.00 0.00 0.00 4.70
481 482 0.523335 GGTATGGCTTTGCTTTCGCG 60.523 55.000 0.00 0.00 39.65 5.87
482 483 0.446222 GTATGGCTTTGCTTTCGCGA 59.554 50.000 3.71 3.71 39.65 5.87
483 484 0.726827 TATGGCTTTGCTTTCGCGAG 59.273 50.000 9.59 0.00 39.65 5.03
484 485 0.955428 ATGGCTTTGCTTTCGCGAGA 60.955 50.000 9.59 3.35 39.65 4.04
485 486 1.133458 GGCTTTGCTTTCGCGAGAG 59.867 57.895 21.42 21.42 43.69 3.20
486 487 1.291877 GGCTTTGCTTTCGCGAGAGA 61.292 55.000 28.81 12.02 43.69 3.10
487 488 0.179238 GCTTTGCTTTCGCGAGAGAC 60.179 55.000 28.81 19.47 43.69 3.36
488 489 1.139989 CTTTGCTTTCGCGAGAGACA 58.860 50.000 28.81 21.57 43.69 3.41
489 490 0.859232 TTTGCTTTCGCGAGAGACAC 59.141 50.000 28.81 12.61 43.69 3.67
490 491 1.275471 TTGCTTTCGCGAGAGACACG 61.275 55.000 28.81 4.66 43.69 4.49
491 492 1.442184 GCTTTCGCGAGAGACACGA 60.442 57.895 28.81 0.00 43.69 4.35
492 493 0.798771 GCTTTCGCGAGAGACACGAT 60.799 55.000 28.81 0.00 43.69 3.73
493 494 1.618861 CTTTCGCGAGAGACACGATT 58.381 50.000 21.21 0.00 43.69 3.34
494 495 1.986378 CTTTCGCGAGAGACACGATTT 59.014 47.619 21.21 0.00 43.69 2.17
495 496 2.060326 TTCGCGAGAGACACGATTTT 57.940 45.000 9.59 0.00 43.69 1.82
496 497 1.336877 TCGCGAGAGACACGATTTTG 58.663 50.000 3.71 0.00 34.84 2.44
497 498 0.246912 CGCGAGAGACACGATTTTGC 60.247 55.000 0.00 0.00 0.00 3.68
498 499 1.071605 GCGAGAGACACGATTTTGCT 58.928 50.000 0.00 0.00 0.00 3.91
499 500 1.461127 GCGAGAGACACGATTTTGCTT 59.539 47.619 0.00 0.00 0.00 3.91
500 501 2.096218 GCGAGAGACACGATTTTGCTTT 60.096 45.455 0.00 0.00 0.00 3.51
501 502 3.726436 CGAGAGACACGATTTTGCTTTC 58.274 45.455 0.00 0.00 0.00 2.62
502 503 3.184379 CGAGAGACACGATTTTGCTTTCA 59.816 43.478 0.00 0.00 0.00 2.69
503 504 4.458708 GAGAGACACGATTTTGCTTTCAC 58.541 43.478 0.00 0.00 0.00 3.18
504 505 3.059597 AGAGACACGATTTTGCTTTCACG 60.060 43.478 0.00 0.00 0.00 4.35
505 506 2.869801 AGACACGATTTTGCTTTCACGA 59.130 40.909 0.00 0.00 0.00 4.35
506 507 3.059597 AGACACGATTTTGCTTTCACGAG 60.060 43.478 0.00 0.00 0.00 4.18
507 508 2.869801 ACACGATTTTGCTTTCACGAGA 59.130 40.909 0.00 0.00 0.00 4.04
508 509 3.059597 ACACGATTTTGCTTTCACGAGAG 60.060 43.478 0.00 0.00 0.00 3.20
509 510 2.480419 ACGATTTTGCTTTCACGAGAGG 59.520 45.455 0.00 0.00 0.00 3.69
510 511 2.726066 CGATTTTGCTTTCACGAGAGGC 60.726 50.000 0.00 0.00 0.00 4.70
511 512 1.674359 TTTTGCTTTCACGAGAGGCA 58.326 45.000 8.05 8.05 34.29 4.75
512 513 0.944386 TTTGCTTTCACGAGAGGCAC 59.056 50.000 10.78 0.00 35.28 5.01
513 514 0.179059 TTGCTTTCACGAGAGGCACA 60.179 50.000 10.78 3.02 35.28 4.57
514 515 0.179059 TGCTTTCACGAGAGGCACAA 60.179 50.000 8.05 0.00 32.29 3.33
515 516 0.235926 GCTTTCACGAGAGGCACAAC 59.764 55.000 0.00 0.00 0.00 3.32
516 517 0.868406 CTTTCACGAGAGGCACAACC 59.132 55.000 0.00 0.00 39.61 3.77
517 518 0.878523 TTTCACGAGAGGCACAACCG 60.879 55.000 0.00 0.00 46.52 4.44
518 519 2.023414 TTCACGAGAGGCACAACCGT 62.023 55.000 0.00 0.00 46.52 4.83
519 520 2.029073 ACGAGAGGCACAACCGTG 59.971 61.111 0.00 0.00 46.52 4.94
575 576 3.650369 TTTTTCCGCGAGTGCCTC 58.350 55.556 8.23 0.00 38.08 4.70
576 577 1.070786 TTTTTCCGCGAGTGCCTCT 59.929 52.632 8.23 0.00 38.08 3.69
577 578 0.949105 TTTTTCCGCGAGTGCCTCTC 60.949 55.000 8.23 0.00 38.08 3.20
624 625 2.559698 TTTTTCCGTGAGAGGCATGA 57.440 45.000 0.00 0.00 35.44 3.07
625 626 2.787473 TTTTCCGTGAGAGGCATGAT 57.213 45.000 0.00 0.00 35.44 2.45
626 627 2.787473 TTTCCGTGAGAGGCATGATT 57.213 45.000 0.00 0.00 35.44 2.57
627 628 2.787473 TTCCGTGAGAGGCATGATTT 57.213 45.000 0.00 0.00 35.44 2.17
628 629 2.787473 TCCGTGAGAGGCATGATTTT 57.213 45.000 0.00 0.00 35.44 1.82
629 630 2.358957 TCCGTGAGAGGCATGATTTTG 58.641 47.619 0.00 0.00 35.44 2.44
630 631 1.202222 CCGTGAGAGGCATGATTTTGC 60.202 52.381 0.00 0.00 42.01 3.68
631 632 1.741706 CGTGAGAGGCATGATTTTGCT 59.258 47.619 0.00 0.00 42.38 3.91
632 633 2.163010 CGTGAGAGGCATGATTTTGCTT 59.837 45.455 0.00 0.00 42.38 3.91
633 634 3.730061 CGTGAGAGGCATGATTTTGCTTC 60.730 47.826 0.00 0.80 46.00 3.86
634 635 2.756760 TGAGAGGCATGATTTTGCTTCC 59.243 45.455 0.00 0.00 46.61 3.46
635 636 1.747355 AGAGGCATGATTTTGCTTCCG 59.253 47.619 0.00 0.00 46.61 4.30
636 637 0.174162 AGGCATGATTTTGCTTCCGC 59.826 50.000 0.00 0.00 42.38 5.54
637 638 1.141591 GGCATGATTTTGCTTCCGCG 61.142 55.000 0.00 0.00 42.38 6.46
638 639 0.179166 GCATGATTTTGCTTCCGCGA 60.179 50.000 8.23 0.00 39.57 5.87
639 640 1.818850 CATGATTTTGCTTCCGCGAG 58.181 50.000 8.23 0.00 39.65 5.03
640 641 1.398041 CATGATTTTGCTTCCGCGAGA 59.602 47.619 8.23 0.00 39.65 4.04
641 642 1.078709 TGATTTTGCTTCCGCGAGAG 58.921 50.000 8.23 5.93 39.65 3.20
642 643 0.375106 GATTTTGCTTCCGCGAGAGG 59.625 55.000 8.23 4.88 39.65 3.69
643 644 0.036388 ATTTTGCTTCCGCGAGAGGA 60.036 50.000 8.23 2.69 39.65 3.71
648 649 2.260434 TTCCGCGAGAGGAAACGG 59.740 61.111 8.23 0.00 46.36 4.44
651 652 4.255126 CGCGAGAGGAAACGGAAA 57.745 55.556 0.00 0.00 0.00 3.13
652 653 2.524300 CGCGAGAGGAAACGGAAAA 58.476 52.632 0.00 0.00 0.00 2.29
653 654 0.863144 CGCGAGAGGAAACGGAAAAA 59.137 50.000 0.00 0.00 0.00 1.94
654 655 1.136336 CGCGAGAGGAAACGGAAAAAG 60.136 52.381 0.00 0.00 0.00 2.27
655 656 1.197036 GCGAGAGGAAACGGAAAAAGG 59.803 52.381 0.00 0.00 0.00 3.11
656 657 2.490991 CGAGAGGAAACGGAAAAAGGT 58.509 47.619 0.00 0.00 0.00 3.50
657 658 2.223377 CGAGAGGAAACGGAAAAAGGTG 59.777 50.000 0.00 0.00 0.00 4.00
661 662 2.949644 AGGAAACGGAAAAAGGTGTCTG 59.050 45.455 0.00 0.00 0.00 3.51
664 665 2.951229 ACGGAAAAAGGTGTCTGGAT 57.049 45.000 0.00 0.00 0.00 3.41
668 669 4.941873 ACGGAAAAAGGTGTCTGGATATTC 59.058 41.667 0.00 0.00 0.00 1.75
698 699 1.107114 CGTCTCTCTGTGGGCTGTAT 58.893 55.000 0.00 0.00 0.00 2.29
700 701 2.688446 CGTCTCTCTGTGGGCTGTATTA 59.312 50.000 0.00 0.00 0.00 0.98
701 702 3.130516 CGTCTCTCTGTGGGCTGTATTAA 59.869 47.826 0.00 0.00 0.00 1.40
726 727 2.291209 TATGGCATGGGCTGTATTGG 57.709 50.000 10.98 0.00 40.87 3.16
729 730 1.109323 GGCATGGGCTGTATTGGTCC 61.109 60.000 0.00 0.00 40.87 4.46
731 732 1.142870 GCATGGGCTGTATTGGTCCTA 59.857 52.381 0.00 0.00 36.96 2.94
735 736 3.897239 TGGGCTGTATTGGTCCTATTTG 58.103 45.455 0.00 0.00 0.00 2.32
737 738 4.264172 TGGGCTGTATTGGTCCTATTTGTT 60.264 41.667 0.00 0.00 0.00 2.83
738 739 4.709886 GGGCTGTATTGGTCCTATTTGTTT 59.290 41.667 0.00 0.00 0.00 2.83
739 740 5.186992 GGGCTGTATTGGTCCTATTTGTTTT 59.813 40.000 0.00 0.00 0.00 2.43
740 741 6.295632 GGGCTGTATTGGTCCTATTTGTTTTT 60.296 38.462 0.00 0.00 0.00 1.94
761 762 0.404040 TTAGGGGTGACAAAGGGCTG 59.596 55.000 0.00 0.00 0.00 4.85
774 779 3.232279 GGGCTGGATCTAGACCACT 57.768 57.895 25.47 0.00 45.76 4.00
776 781 0.755686 GGCTGGATCTAGACCACTGG 59.244 60.000 10.75 0.00 33.57 4.00
953 988 3.501911 CCAATCCCATCCCCGGCT 61.502 66.667 0.00 0.00 0.00 5.52
961 996 4.220163 ATCCCCGGCTAGGCGAGA 62.220 66.667 37.12 30.63 39.21 4.04
1094 1129 1.146930 CCACCCCGATCACCATCAG 59.853 63.158 0.00 0.00 0.00 2.90
1205 1240 1.891919 TCAACGACACAGGCAAGGC 60.892 57.895 0.00 0.00 0.00 4.35
1236 1294 1.821216 GTGGCTTCTTCGATTTGGGA 58.179 50.000 0.00 0.00 0.00 4.37
1245 1303 1.208706 TCGATTTGGGATGGTGGCTA 58.791 50.000 0.00 0.00 0.00 3.93
1301 1364 3.324108 GGTACAAGCCCGGGGTGA 61.324 66.667 29.25 12.41 0.00 4.02
1468 1590 5.633830 TTCTGCTTGAGGTCAATTGATTC 57.366 39.130 12.12 12.80 35.02 2.52
1549 1673 6.092122 TGTGCGATTAGGTTGTTCTAGAATTG 59.908 38.462 8.75 0.00 0.00 2.32
1552 1676 7.820386 TGCGATTAGGTTGTTCTAGAATTGTTA 59.180 33.333 8.75 0.00 0.00 2.41
1576 1773 2.559668 CAGTCTGATGCATTGTTGGGTT 59.440 45.455 0.00 0.00 0.00 4.11
1632 1842 1.609072 CGTGAGTGGACTCTGTTCTGA 59.391 52.381 8.24 0.00 43.25 3.27
1646 1856 6.016777 ACTCTGTTCTGATGTGGATTGTTTTC 60.017 38.462 0.00 0.00 0.00 2.29
1671 1881 4.698201 AAGGTGGTTTTATTGGGGTTTG 57.302 40.909 0.00 0.00 0.00 2.93
1714 2128 0.442699 CGCCGAGTAAGCAAACCTTC 59.557 55.000 0.00 0.00 34.95 3.46
1726 2140 4.075682 AGCAAACCTTCTTAGCTCTTTCC 58.924 43.478 0.00 0.00 0.00 3.13
1831 2274 4.082026 GCCAACATCTGCAAAGGACTAAAT 60.082 41.667 0.00 0.00 0.00 1.40
1834 2277 7.601856 CCAACATCTGCAAAGGACTAAATAAA 58.398 34.615 0.00 0.00 0.00 1.40
1836 2279 9.643693 CAACATCTGCAAAGGACTAAATAAAAT 57.356 29.630 0.00 0.00 0.00 1.82
1841 2284 9.174166 TCTGCAAAGGACTAAATAAAATACTCC 57.826 33.333 0.00 0.00 0.00 3.85
1842 2285 8.288689 TGCAAAGGACTAAATAAAATACTCCC 57.711 34.615 0.00 0.00 0.00 4.30
1843 2286 8.113462 TGCAAAGGACTAAATAAAATACTCCCT 58.887 33.333 0.00 0.00 0.00 4.20
1844 2287 8.622157 GCAAAGGACTAAATAAAATACTCCCTC 58.378 37.037 0.00 0.00 0.00 4.30
1845 2288 9.907229 CAAAGGACTAAATAAAATACTCCCTCT 57.093 33.333 0.00 0.00 0.00 3.69
1846 2289 9.907229 AAAGGACTAAATAAAATACTCCCTCTG 57.093 33.333 0.00 0.00 0.00 3.35
1847 2290 8.035448 AGGACTAAATAAAATACTCCCTCTGG 57.965 38.462 0.00 0.00 0.00 3.86
1848 2291 7.628101 AGGACTAAATAAAATACTCCCTCTGGT 59.372 37.037 0.00 0.00 0.00 4.00
1849 2292 7.932491 GGACTAAATAAAATACTCCCTCTGGTC 59.068 40.741 0.00 0.00 0.00 4.02
1850 2293 7.803131 ACTAAATAAAATACTCCCTCTGGTCC 58.197 38.462 0.00 0.00 0.00 4.46
1851 2294 6.652205 AAATAAAATACTCCCTCTGGTCCA 57.348 37.500 0.00 0.00 0.00 4.02
1852 2295 6.848562 AATAAAATACTCCCTCTGGTCCAT 57.151 37.500 0.00 0.00 0.00 3.41
1853 2296 7.947782 AATAAAATACTCCCTCTGGTCCATA 57.052 36.000 0.00 0.00 0.00 2.74
1854 2297 8.525729 AATAAAATACTCCCTCTGGTCCATAT 57.474 34.615 0.00 0.00 0.00 1.78
1855 2298 6.848562 AAAATACTCCCTCTGGTCCATATT 57.151 37.500 0.00 0.00 0.00 1.28
1856 2299 7.947782 AAAATACTCCCTCTGGTCCATATTA 57.052 36.000 0.00 0.00 0.00 0.98
1857 2300 7.947782 AAATACTCCCTCTGGTCCATATTAA 57.052 36.000 0.00 0.00 0.00 1.40
1858 2301 8.525729 AAATACTCCCTCTGGTCCATATTAAT 57.474 34.615 0.00 0.00 0.00 1.40
1859 2302 8.525729 AATACTCCCTCTGGTCCATATTAATT 57.474 34.615 0.00 0.00 0.00 1.40
1860 2303 6.192970 ACTCCCTCTGGTCCATATTAATTG 57.807 41.667 0.00 0.00 0.00 2.32
1861 2304 5.672194 ACTCCCTCTGGTCCATATTAATTGT 59.328 40.000 0.00 0.00 0.00 2.71
1862 2305 6.849697 ACTCCCTCTGGTCCATATTAATTGTA 59.150 38.462 0.00 0.00 0.00 2.41
1863 2306 7.517604 ACTCCCTCTGGTCCATATTAATTGTAT 59.482 37.037 0.00 0.00 0.00 2.29
1864 2307 8.287904 TCCCTCTGGTCCATATTAATTGTATT 57.712 34.615 0.00 0.00 0.00 1.89
1865 2308 9.400208 TCCCTCTGGTCCATATTAATTGTATTA 57.600 33.333 0.00 0.00 0.00 0.98
1866 2309 9.449719 CCCTCTGGTCCATATTAATTGTATTAC 57.550 37.037 0.00 0.00 0.00 1.89
1904 2347 8.967664 AATCCATGACAATTAATTTGGATTGG 57.032 30.769 28.35 18.49 46.73 3.16
1905 2348 7.730672 TCCATGACAATTAATTTGGATTGGA 57.269 32.000 13.14 11.67 39.80 3.53
1906 2349 7.784037 TCCATGACAATTAATTTGGATTGGAG 58.216 34.615 13.14 0.00 39.80 3.86
1907 2350 6.987992 CCATGACAATTAATTTGGATTGGAGG 59.012 38.462 10.04 0.00 39.80 4.30
1908 2351 6.543430 TGACAATTAATTTGGATTGGAGGG 57.457 37.500 0.00 0.00 39.80 4.30
1909 2352 6.259893 TGACAATTAATTTGGATTGGAGGGA 58.740 36.000 0.00 0.00 39.80 4.20
1910 2353 6.380846 TGACAATTAATTTGGATTGGAGGGAG 59.619 38.462 0.00 0.00 39.80 4.30
1935 2378 9.209175 AGTAATACTTCTTTAGTTCTGCACAAG 57.791 33.333 0.00 0.00 38.33 3.16
2210 2678 0.033699 AGGGGCTGGAGCTCAAAATC 60.034 55.000 17.19 0.00 45.20 2.17
2256 2724 1.131638 TGGTGGTGAAGTGCTTCTCT 58.868 50.000 12.44 0.00 40.14 3.10
2512 2981 3.736252 CGGATGTTCATATCTTCACCGAC 59.264 47.826 0.00 0.00 40.16 4.79
2513 2982 4.693283 GGATGTTCATATCTTCACCGACA 58.307 43.478 0.00 0.00 0.00 4.35
2514 2983 4.747108 GGATGTTCATATCTTCACCGACAG 59.253 45.833 0.00 0.00 0.00 3.51
2580 3070 8.612619 CCTGTTGAATATTATTAGTGACACACC 58.387 37.037 8.59 0.00 34.49 4.16
2584 3097 6.478673 TGAATATTATTAGTGACACACCGCTG 59.521 38.462 8.59 0.00 34.49 5.18
2629 3142 0.535780 TTTGTCAGGTCAGCAGGCTG 60.536 55.000 14.97 14.97 44.86 4.85
2739 3252 3.580022 TGAACAATCTGAGAAGCCTGAGA 59.420 43.478 0.00 0.00 37.08 3.27
3046 3581 8.502387 GCTGATGATGTTGTAGGAAGATAAATC 58.498 37.037 0.00 0.00 0.00 2.17
3186 4012 6.985653 ACATAGTAAGCATGGATGTAGTCT 57.014 37.500 0.00 0.00 0.00 3.24
3209 4035 9.793252 GTCTGTTAGAATGATTGTTTTATGCAT 57.207 29.630 3.79 3.79 0.00 3.96
3261 4087 2.704464 TGGCAAGATGATGTCTGAGG 57.296 50.000 0.00 0.00 37.23 3.86
3352 4191 8.128582 TCACATGATGTTTCTCTTGTAAACAAC 58.871 33.333 0.00 4.20 46.59 3.32
3535 4374 4.036262 GTCACTCTAAAATGTGTTGGTGCA 59.964 41.667 0.00 0.00 35.82 4.57
3576 4415 6.675728 GCTCGGAAGATTTCATAAACAGAACC 60.676 42.308 0.00 0.00 40.84 3.62
3718 4602 9.790389 CCCTCAATTGTATATCGTAGATCTAAC 57.210 37.037 3.40 0.00 45.12 2.34
3889 4775 0.802994 ACAAATCGCGCATGCCATTG 60.803 50.000 13.15 12.18 31.96 2.82
3894 4781 0.179097 TCGCGCATGCCATTGTACTA 60.179 50.000 13.15 0.00 38.08 1.82
3909 4796 6.072673 CCATTGTACTAAGTGTCAAAAGGTCC 60.073 42.308 0.00 0.00 0.00 4.46
3952 4847 6.225318 AGATGAAGCTAGCAAGAAGATCATC 58.775 40.000 18.83 19.71 38.18 2.92
4045 5259 1.273759 TTCTGCTCAGCTCAGTCCAT 58.726 50.000 0.00 0.00 33.48 3.41
4047 5261 2.460669 TCTGCTCAGCTCAGTCCATTA 58.539 47.619 0.00 0.00 33.48 1.90
4048 5262 3.036819 TCTGCTCAGCTCAGTCCATTAT 58.963 45.455 0.00 0.00 33.48 1.28
4049 5263 4.218312 TCTGCTCAGCTCAGTCCATTATA 58.782 43.478 0.00 0.00 33.48 0.98
4050 5264 4.038522 TCTGCTCAGCTCAGTCCATTATAC 59.961 45.833 0.00 0.00 33.48 1.47
4098 5430 8.924511 TTATCCCTCTGAATTCATTTATCCAC 57.075 34.615 8.96 0.00 0.00 4.02
4133 5465 7.120285 ACAAGTGAATATCATGTCAACAAGAGG 59.880 37.037 0.00 0.00 0.00 3.69
4136 5468 5.819379 TGAATATCATGTCAACAAGAGGAGC 59.181 40.000 0.00 0.00 0.00 4.70
4140 5472 2.936919 TGTCAACAAGAGGAGCACAT 57.063 45.000 0.00 0.00 0.00 3.21
4204 5553 4.141756 GGTGAACATCCAGATCAGAGACAT 60.142 45.833 0.00 0.00 28.79 3.06
4223 5572 1.673665 GACCCAGCTGCAGTTCAGG 60.674 63.158 16.64 14.52 43.06 3.86
4224 5573 2.360852 CCCAGCTGCAGTTCAGGG 60.361 66.667 16.64 13.45 43.06 4.45
4225 5574 2.752358 CCAGCTGCAGTTCAGGGA 59.248 61.111 16.64 0.00 43.06 4.20
4421 5782 3.941188 CCTGTGGTGCCGGTCACT 61.941 66.667 22.54 0.00 44.98 3.41
4460 5821 1.898094 AGAACTGCACATGCCGCAA 60.898 52.632 11.18 0.00 39.30 4.85
4480 5841 4.796290 GCAATTGCATGATCAGCTTAGCAT 60.796 41.667 25.36 0.00 41.59 3.79
4485 5846 5.370679 TGCATGATCAGCTTAGCATAAGAA 58.629 37.500 7.07 0.00 0.00 2.52
4486 5847 5.237996 TGCATGATCAGCTTAGCATAAGAAC 59.762 40.000 7.07 0.00 0.00 3.01
4487 5848 5.469421 GCATGATCAGCTTAGCATAAGAACT 59.531 40.000 7.07 0.00 0.00 3.01
4488 5849 6.017275 GCATGATCAGCTTAGCATAAGAACTT 60.017 38.462 7.07 0.00 0.00 2.66
4489 5850 7.172190 GCATGATCAGCTTAGCATAAGAACTTA 59.828 37.037 7.07 0.00 0.00 2.24
4490 5851 9.049523 CATGATCAGCTTAGCATAAGAACTTAA 57.950 33.333 7.07 0.00 0.00 1.85
4491 5852 8.654230 TGATCAGCTTAGCATAAGAACTTAAG 57.346 34.615 7.07 0.00 0.00 1.85
4492 5853 8.478066 TGATCAGCTTAGCATAAGAACTTAAGA 58.522 33.333 10.09 0.00 0.00 2.10
4526 5887 9.185192 GAATTCGACTGTTTGATTTGAAATTCT 57.815 29.630 0.00 0.00 0.00 2.40
4566 5927 7.953158 TTCTAGAGACATGTCTTGAACAAAG 57.047 36.000 28.46 16.00 42.37 2.77
4567 5928 7.055667 TCTAGAGACATGTCTTGAACAAAGT 57.944 36.000 28.46 3.10 42.37 2.66
4568 5929 7.500992 TCTAGAGACATGTCTTGAACAAAGTT 58.499 34.615 28.46 2.55 42.37 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.993449 AGAAGAGAGGTTCGTCGTTC 57.007 50.000 0.00 0.00 39.04 3.95
3 4 3.562567 AAGAAGAAGAGAGGTTCGTCG 57.437 47.619 0.00 0.00 39.21 5.12
5 6 3.394719 GCAAAGAAGAAGAGAGGTTCGT 58.605 45.455 0.00 0.00 0.00 3.85
6 7 2.410053 CGCAAAGAAGAAGAGAGGTTCG 59.590 50.000 0.00 0.00 0.00 3.95
7 8 3.394719 ACGCAAAGAAGAAGAGAGGTTC 58.605 45.455 0.00 0.00 0.00 3.62
8 9 3.070302 AGACGCAAAGAAGAAGAGAGGTT 59.930 43.478 0.00 0.00 0.00 3.50
9 10 2.630580 AGACGCAAAGAAGAAGAGAGGT 59.369 45.455 0.00 0.00 0.00 3.85
10 11 2.992543 CAGACGCAAAGAAGAAGAGAGG 59.007 50.000 0.00 0.00 0.00 3.69
11 12 3.648009 ACAGACGCAAAGAAGAAGAGAG 58.352 45.455 0.00 0.00 0.00 3.20
12 13 3.735237 ACAGACGCAAAGAAGAAGAGA 57.265 42.857 0.00 0.00 0.00 3.10
13 14 4.264145 CGATACAGACGCAAAGAAGAAGAG 59.736 45.833 0.00 0.00 0.00 2.85
14 15 4.082949 TCGATACAGACGCAAAGAAGAAGA 60.083 41.667 0.00 0.00 0.00 2.87
15 16 4.166523 TCGATACAGACGCAAAGAAGAAG 58.833 43.478 0.00 0.00 0.00 2.85
16 17 4.166523 CTCGATACAGACGCAAAGAAGAA 58.833 43.478 0.00 0.00 0.00 2.52
17 18 3.190744 ACTCGATACAGACGCAAAGAAGA 59.809 43.478 0.00 0.00 0.00 2.87
18 19 3.502920 ACTCGATACAGACGCAAAGAAG 58.497 45.455 0.00 0.00 0.00 2.85
19 20 3.570926 ACTCGATACAGACGCAAAGAA 57.429 42.857 0.00 0.00 0.00 2.52
20 21 4.598062 CATACTCGATACAGACGCAAAGA 58.402 43.478 0.00 0.00 0.00 2.52
21 22 3.180584 GCATACTCGATACAGACGCAAAG 59.819 47.826 0.00 0.00 0.00 2.77
22 23 3.113322 GCATACTCGATACAGACGCAAA 58.887 45.455 0.00 0.00 0.00 3.68
23 24 2.727777 GCATACTCGATACAGACGCAA 58.272 47.619 0.00 0.00 0.00 4.85
24 25 1.333791 CGCATACTCGATACAGACGCA 60.334 52.381 0.00 0.00 0.00 5.24
25 26 1.319172 CGCATACTCGATACAGACGC 58.681 55.000 0.00 0.00 0.00 5.19
26 27 1.951792 CCGCATACTCGATACAGACG 58.048 55.000 0.00 0.00 0.00 4.18
27 28 1.267261 AGCCGCATACTCGATACAGAC 59.733 52.381 0.00 0.00 0.00 3.51
28 29 1.535896 GAGCCGCATACTCGATACAGA 59.464 52.381 0.00 0.00 0.00 3.41
29 30 1.401670 GGAGCCGCATACTCGATACAG 60.402 57.143 0.00 0.00 34.87 2.74
30 31 0.596577 GGAGCCGCATACTCGATACA 59.403 55.000 0.00 0.00 34.87 2.29
31 32 0.596577 TGGAGCCGCATACTCGATAC 59.403 55.000 0.00 0.00 34.87 2.24
32 33 1.000607 GTTGGAGCCGCATACTCGATA 60.001 52.381 0.00 0.00 34.87 2.92
33 34 0.249489 GTTGGAGCCGCATACTCGAT 60.249 55.000 0.00 0.00 34.87 3.59
34 35 1.141019 GTTGGAGCCGCATACTCGA 59.859 57.895 0.00 0.00 34.87 4.04
35 36 1.141881 AGTTGGAGCCGCATACTCG 59.858 57.895 0.00 0.00 34.87 4.18
36 37 1.432270 GCAGTTGGAGCCGCATACTC 61.432 60.000 0.00 0.00 0.00 2.59
37 38 1.450312 GCAGTTGGAGCCGCATACT 60.450 57.895 0.00 0.00 0.00 2.12
38 39 2.813179 CGCAGTTGGAGCCGCATAC 61.813 63.158 0.00 0.00 0.00 2.39
39 40 2.511373 CGCAGTTGGAGCCGCATA 60.511 61.111 0.00 0.00 0.00 3.14
45 46 3.642778 TACTCGCCGCAGTTGGAGC 62.643 63.158 1.60 0.00 0.00 4.70
46 47 1.517257 CTACTCGCCGCAGTTGGAG 60.517 63.158 1.60 0.00 0.00 3.86
47 48 1.812686 AACTACTCGCCGCAGTTGGA 61.813 55.000 1.60 0.00 31.47 3.53
48 49 1.374252 AACTACTCGCCGCAGTTGG 60.374 57.895 1.60 0.00 31.47 3.77
49 50 1.781555 CAACTACTCGCCGCAGTTG 59.218 57.895 10.24 10.24 42.13 3.16
50 51 2.027625 GCAACTACTCGCCGCAGTT 61.028 57.895 1.60 0.00 32.82 3.16
51 52 2.432628 GCAACTACTCGCCGCAGT 60.433 61.111 0.00 0.00 0.00 4.40
52 53 3.188786 GGCAACTACTCGCCGCAG 61.189 66.667 0.00 0.00 38.82 5.18
57 58 1.739067 ATTTGAGGGCAACTACTCGC 58.261 50.000 0.00 0.00 36.53 5.03
58 59 4.766404 AAAATTTGAGGGCAACTACTCG 57.234 40.909 0.00 0.00 36.53 4.18
59 60 5.154222 CGAAAAATTTGAGGGCAACTACTC 58.846 41.667 0.00 0.00 32.79 2.59
60 61 4.583073 ACGAAAAATTTGAGGGCAACTACT 59.417 37.500 0.00 0.00 32.79 2.57
61 62 4.866921 ACGAAAAATTTGAGGGCAACTAC 58.133 39.130 0.00 0.00 32.79 2.73
62 63 4.022676 GGACGAAAAATTTGAGGGCAACTA 60.023 41.667 0.00 0.00 32.79 2.24
63 64 3.243737 GGACGAAAAATTTGAGGGCAACT 60.244 43.478 0.00 0.00 32.79 3.16
64 65 3.057019 GGACGAAAAATTTGAGGGCAAC 58.943 45.455 0.00 0.00 32.79 4.17
65 66 2.962421 AGGACGAAAAATTTGAGGGCAA 59.038 40.909 0.00 0.00 0.00 4.52
66 67 2.556622 GAGGACGAAAAATTTGAGGGCA 59.443 45.455 0.00 0.00 0.00 5.36
67 68 2.414161 CGAGGACGAAAAATTTGAGGGC 60.414 50.000 0.00 0.00 42.66 5.19
68 69 2.414161 GCGAGGACGAAAAATTTGAGGG 60.414 50.000 0.00 0.00 42.66 4.30
69 70 2.724839 CGCGAGGACGAAAAATTTGAGG 60.725 50.000 0.00 0.00 42.66 3.86
70 71 2.495939 CGCGAGGACGAAAAATTTGAG 58.504 47.619 0.00 0.00 42.66 3.02
71 72 2.587612 CGCGAGGACGAAAAATTTGA 57.412 45.000 0.00 0.00 42.66 2.69
91 92 4.839706 ATCCACAATGGGGGCGCC 62.840 66.667 21.18 21.18 38.32 6.53
92 93 3.219198 GATCCACAATGGGGGCGC 61.219 66.667 0.00 0.00 38.32 6.53
93 94 1.152694 ATGATCCACAATGGGGGCG 60.153 57.895 0.00 0.00 38.32 6.13
94 95 0.397535 ACATGATCCACAATGGGGGC 60.398 55.000 0.00 0.00 38.32 5.80
95 96 2.034124 GAACATGATCCACAATGGGGG 58.966 52.381 0.00 0.00 38.32 5.40
96 97 2.428171 GTGAACATGATCCACAATGGGG 59.572 50.000 0.00 0.00 38.32 4.96
97 98 2.428171 GGTGAACATGATCCACAATGGG 59.572 50.000 0.00 0.00 38.32 4.00
98 99 3.090790 TGGTGAACATGATCCACAATGG 58.909 45.455 0.00 0.00 39.43 3.16
99 100 4.496840 CGATGGTGAACATGATCCACAATG 60.497 45.833 0.00 0.00 40.72 2.82
100 101 3.628942 CGATGGTGAACATGATCCACAAT 59.371 43.478 0.00 3.14 40.72 2.71
101 102 3.009026 CGATGGTGAACATGATCCACAA 58.991 45.455 0.00 0.00 40.72 3.33
102 103 2.631267 CGATGGTGAACATGATCCACA 58.369 47.619 0.00 0.00 40.72 4.17
103 104 1.331756 GCGATGGTGAACATGATCCAC 59.668 52.381 0.00 4.05 40.72 4.02
104 105 1.667236 GCGATGGTGAACATGATCCA 58.333 50.000 0.00 2.54 40.72 3.41
105 106 0.947244 GGCGATGGTGAACATGATCC 59.053 55.000 0.00 0.00 40.72 3.36
106 107 1.869767 GAGGCGATGGTGAACATGATC 59.130 52.381 0.00 0.00 40.72 2.92
107 108 1.210234 TGAGGCGATGGTGAACATGAT 59.790 47.619 0.00 0.00 40.72 2.45
108 109 0.612744 TGAGGCGATGGTGAACATGA 59.387 50.000 0.00 0.00 40.72 3.07
109 110 1.600957 GATGAGGCGATGGTGAACATG 59.399 52.381 0.00 0.00 40.72 3.21
110 111 1.807755 CGATGAGGCGATGGTGAACAT 60.808 52.381 0.00 0.00 44.18 2.71
111 112 0.460109 CGATGAGGCGATGGTGAACA 60.460 55.000 0.00 0.00 0.00 3.18
112 113 1.154205 CCGATGAGGCGATGGTGAAC 61.154 60.000 0.00 0.00 0.00 3.18
113 114 1.143838 CCGATGAGGCGATGGTGAA 59.856 57.895 0.00 0.00 0.00 3.18
114 115 2.058001 ACCGATGAGGCGATGGTGA 61.058 57.895 0.00 0.00 46.52 4.02
115 116 1.884464 CACCGATGAGGCGATGGTG 60.884 63.158 0.00 0.00 46.52 4.17
116 117 2.501128 CACCGATGAGGCGATGGT 59.499 61.111 0.00 0.00 46.52 3.55
117 118 2.280389 CCACCGATGAGGCGATGG 60.280 66.667 0.00 0.00 46.52 3.51
118 119 2.969238 GCCACCGATGAGGCGATG 60.969 66.667 0.00 0.00 46.52 3.84
124 125 1.144936 GAAGGAGGCCACCGATGAG 59.855 63.158 14.10 0.00 34.73 2.90
125 126 2.367202 GGAAGGAGGCCACCGATGA 61.367 63.158 14.10 0.00 34.73 2.92
126 127 2.190578 GGAAGGAGGCCACCGATG 59.809 66.667 14.10 0.00 34.73 3.84
127 128 2.285368 TGGAAGGAGGCCACCGAT 60.285 61.111 14.10 6.93 34.73 4.18
128 129 3.003173 CTGGAAGGAGGCCACCGA 61.003 66.667 14.10 0.00 34.73 4.69
129 130 4.785453 GCTGGAAGGAGGCCACCG 62.785 72.222 14.10 0.00 34.73 4.94
130 131 2.911926 AAGCTGGAAGGAGGCCACC 61.912 63.158 11.96 11.96 0.00 4.61
131 132 1.676967 CAAGCTGGAAGGAGGCCAC 60.677 63.158 5.01 0.00 0.00 5.01
132 133 2.759114 CAAGCTGGAAGGAGGCCA 59.241 61.111 5.01 0.00 0.00 5.36
133 134 2.044551 CCAAGCTGGAAGGAGGCC 60.045 66.667 0.00 0.00 40.96 5.19
134 135 2.044551 CCCAAGCTGGAAGGAGGC 60.045 66.667 4.00 0.00 40.96 4.70
135 136 2.679716 CCCCAAGCTGGAAGGAGG 59.320 66.667 4.00 0.00 40.96 4.30
136 137 1.919600 CTCCCCCAAGCTGGAAGGAG 61.920 65.000 18.05 18.05 45.22 3.69
137 138 1.925455 CTCCCCCAAGCTGGAAGGA 60.925 63.158 4.00 8.19 40.96 3.36
138 139 2.679716 CTCCCCCAAGCTGGAAGG 59.320 66.667 4.00 4.84 40.96 3.46
139 140 2.679716 CCTCCCCCAAGCTGGAAG 59.320 66.667 4.00 0.00 40.96 3.46
140 141 3.661648 GCCTCCCCCAAGCTGGAA 61.662 66.667 4.00 0.00 40.96 3.53
142 143 3.307089 AATGCCTCCCCCAAGCTGG 62.307 63.158 0.00 0.00 37.25 4.85
143 144 1.755783 GAATGCCTCCCCCAAGCTG 60.756 63.158 0.00 0.00 0.00 4.24
144 145 1.513087 AAGAATGCCTCCCCCAAGCT 61.513 55.000 0.00 0.00 0.00 3.74
145 146 1.000866 AAGAATGCCTCCCCCAAGC 59.999 57.895 0.00 0.00 0.00 4.01
146 147 0.396278 GGAAGAATGCCTCCCCCAAG 60.396 60.000 0.00 0.00 0.00 3.61
147 148 1.697297 GGAAGAATGCCTCCCCCAA 59.303 57.895 0.00 0.00 0.00 4.12
148 149 2.679342 CGGAAGAATGCCTCCCCCA 61.679 63.158 0.00 0.00 0.00 4.96
149 150 1.921869 TTCGGAAGAATGCCTCCCCC 61.922 60.000 0.00 0.00 46.92 5.40
150 151 1.607612 TTCGGAAGAATGCCTCCCC 59.392 57.895 0.00 0.00 46.92 4.81
160 161 1.472878 CCTCGATCACTGTTCGGAAGA 59.527 52.381 9.15 0.00 37.22 2.87
161 162 1.472878 TCCTCGATCACTGTTCGGAAG 59.527 52.381 9.15 1.74 37.22 3.46
162 163 1.472878 CTCCTCGATCACTGTTCGGAA 59.527 52.381 9.15 0.00 37.22 4.30
163 164 1.095600 CTCCTCGATCACTGTTCGGA 58.904 55.000 9.15 0.61 37.22 4.55
164 165 0.526524 GCTCCTCGATCACTGTTCGG 60.527 60.000 9.15 1.79 37.22 4.30
165 166 0.863538 CGCTCCTCGATCACTGTTCG 60.864 60.000 3.50 3.50 41.67 3.95
166 167 1.142778 GCGCTCCTCGATCACTGTTC 61.143 60.000 0.00 0.00 41.67 3.18
167 168 1.153745 GCGCTCCTCGATCACTGTT 60.154 57.895 0.00 0.00 41.67 3.16
168 169 2.492090 GCGCTCCTCGATCACTGT 59.508 61.111 0.00 0.00 41.67 3.55
169 170 2.279120 GGCGCTCCTCGATCACTG 60.279 66.667 7.64 0.00 41.67 3.66
170 171 3.893763 CGGCGCTCCTCGATCACT 61.894 66.667 7.64 0.00 41.67 3.41
171 172 4.933064 CCGGCGCTCCTCGATCAC 62.933 72.222 7.64 0.00 41.67 3.06
173 174 4.632458 GTCCGGCGCTCCTCGATC 62.632 72.222 7.64 0.00 41.67 3.69
185 186 4.194720 CGAAGAGCCCTCGTCCGG 62.195 72.222 0.00 0.00 35.19 5.14
186 187 4.194720 CCGAAGAGCCCTCGTCCG 62.195 72.222 5.80 3.71 35.19 4.79
187 188 2.754658 TCCGAAGAGCCCTCGTCC 60.755 66.667 5.80 0.00 35.19 4.79
188 189 2.490685 GTCCGAAGAGCCCTCGTC 59.509 66.667 1.78 1.78 35.27 4.20
189 190 3.441290 CGTCCGAAGAGCCCTCGT 61.441 66.667 0.00 0.00 34.09 4.18
190 191 4.194720 CCGTCCGAAGAGCCCTCG 62.195 72.222 0.00 0.00 34.09 4.63
191 192 1.885163 TTTCCGTCCGAAGAGCCCTC 61.885 60.000 0.00 0.00 0.00 4.30
192 193 1.911766 TTTCCGTCCGAAGAGCCCT 60.912 57.895 0.00 0.00 0.00 5.19
193 194 1.740664 GTTTCCGTCCGAAGAGCCC 60.741 63.158 0.00 0.00 0.00 5.19
194 195 1.740664 GGTTTCCGTCCGAAGAGCC 60.741 63.158 0.00 0.00 0.00 4.70
195 196 3.872027 GGTTTCCGTCCGAAGAGC 58.128 61.111 0.00 0.00 0.00 4.09
212 213 3.900892 ATAGCTCGTCCGCCCACG 61.901 66.667 0.00 0.00 41.36 4.94
213 214 2.279517 CATAGCTCGTCCGCCCAC 60.280 66.667 0.00 0.00 0.00 4.61
214 215 3.536917 CCATAGCTCGTCCGCCCA 61.537 66.667 0.00 0.00 0.00 5.36
215 216 4.971125 GCCATAGCTCGTCCGCCC 62.971 72.222 0.00 0.00 35.50 6.13
216 217 4.971125 GGCCATAGCTCGTCCGCC 62.971 72.222 0.00 0.00 39.73 6.13
217 218 4.221422 TGGCCATAGCTCGTCCGC 62.221 66.667 0.00 0.00 39.73 5.54
218 219 2.279517 GTGGCCATAGCTCGTCCG 60.280 66.667 9.72 0.00 39.73 4.79
219 220 1.227380 CAGTGGCCATAGCTCGTCC 60.227 63.158 9.72 0.00 39.73 4.79
220 221 0.807667 CACAGTGGCCATAGCTCGTC 60.808 60.000 9.72 0.00 39.73 4.20
221 222 1.219124 CACAGTGGCCATAGCTCGT 59.781 57.895 9.72 0.00 39.73 4.18
222 223 0.807667 GTCACAGTGGCCATAGCTCG 60.808 60.000 9.72 0.00 39.73 5.03
223 224 0.539051 AGTCACAGTGGCCATAGCTC 59.461 55.000 9.72 0.00 39.73 4.09
224 225 0.539051 GAGTCACAGTGGCCATAGCT 59.461 55.000 9.72 0.00 39.73 3.32
225 226 0.462759 GGAGTCACAGTGGCCATAGC 60.463 60.000 9.72 0.00 38.76 2.97
226 227 0.904649 TGGAGTCACAGTGGCCATAG 59.095 55.000 9.72 7.37 0.00 2.23
227 228 1.210234 CATGGAGTCACAGTGGCCATA 59.790 52.381 9.72 0.48 37.24 2.74
228 229 0.034767 CATGGAGTCACAGTGGCCAT 60.035 55.000 9.72 14.25 39.81 4.40
229 230 1.126948 TCATGGAGTCACAGTGGCCA 61.127 55.000 0.00 0.00 0.00 5.36
230 231 0.036732 TTCATGGAGTCACAGTGGCC 59.963 55.000 0.09 0.00 0.00 5.36
231 232 1.160137 GTTCATGGAGTCACAGTGGC 58.840 55.000 0.00 0.00 0.00 5.01
232 233 2.549064 TGTTCATGGAGTCACAGTGG 57.451 50.000 0.00 0.00 0.00 4.00
233 234 3.470709 ACTTGTTCATGGAGTCACAGTG 58.529 45.455 0.00 0.00 0.00 3.66
234 235 3.845781 ACTTGTTCATGGAGTCACAGT 57.154 42.857 0.00 0.00 0.00 3.55
235 236 4.887748 AGTACTTGTTCATGGAGTCACAG 58.112 43.478 0.00 0.00 0.00 3.66
236 237 4.955811 AGTACTTGTTCATGGAGTCACA 57.044 40.909 0.00 0.00 0.00 3.58
237 238 6.366332 CACTAAGTACTTGTTCATGGAGTCAC 59.634 42.308 18.56 0.00 0.00 3.67
238 239 6.041637 ACACTAAGTACTTGTTCATGGAGTCA 59.958 38.462 18.56 0.00 0.00 3.41
239 240 6.456501 ACACTAAGTACTTGTTCATGGAGTC 58.543 40.000 18.56 0.00 0.00 3.36
240 241 6.420913 ACACTAAGTACTTGTTCATGGAGT 57.579 37.500 18.56 7.89 0.00 3.85
241 242 6.929049 TCAACACTAAGTACTTGTTCATGGAG 59.071 38.462 18.56 7.25 30.98 3.86
242 243 6.822442 TCAACACTAAGTACTTGTTCATGGA 58.178 36.000 18.56 5.65 30.98 3.41
243 244 6.147821 CCTCAACACTAAGTACTTGTTCATGG 59.852 42.308 18.56 11.19 30.98 3.66
244 245 6.706270 ACCTCAACACTAAGTACTTGTTCATG 59.294 38.462 18.56 11.32 30.98 3.07
245 246 6.827727 ACCTCAACACTAAGTACTTGTTCAT 58.172 36.000 18.56 0.00 30.98 2.57
246 247 6.229936 ACCTCAACACTAAGTACTTGTTCA 57.770 37.500 18.56 0.27 30.98 3.18
247 248 5.401674 CGACCTCAACACTAAGTACTTGTTC 59.598 44.000 18.56 2.17 30.98 3.18
248 249 5.068198 TCGACCTCAACACTAAGTACTTGTT 59.932 40.000 18.56 11.65 33.69 2.83
249 250 4.581824 TCGACCTCAACACTAAGTACTTGT 59.418 41.667 18.56 11.03 0.00 3.16
250 251 4.916249 GTCGACCTCAACACTAAGTACTTG 59.084 45.833 18.56 10.41 0.00 3.16
251 252 4.320057 CGTCGACCTCAACACTAAGTACTT 60.320 45.833 13.68 13.68 0.00 2.24
252 253 3.188048 CGTCGACCTCAACACTAAGTACT 59.812 47.826 10.58 0.00 0.00 2.73
253 254 3.187227 TCGTCGACCTCAACACTAAGTAC 59.813 47.826 10.58 0.00 0.00 2.73
254 255 3.187227 GTCGTCGACCTCAACACTAAGTA 59.813 47.826 14.60 0.00 0.00 2.24
255 256 2.031333 GTCGTCGACCTCAACACTAAGT 60.031 50.000 14.60 0.00 0.00 2.24
256 257 2.031420 TGTCGTCGACCTCAACACTAAG 60.031 50.000 22.05 0.00 0.00 2.18
257 258 1.948834 TGTCGTCGACCTCAACACTAA 59.051 47.619 22.05 0.00 0.00 2.24
258 259 1.596603 TGTCGTCGACCTCAACACTA 58.403 50.000 22.05 0.00 0.00 2.74
259 260 0.959553 ATGTCGTCGACCTCAACACT 59.040 50.000 22.05 0.00 0.00 3.55
260 261 2.248487 GTATGTCGTCGACCTCAACAC 58.752 52.381 22.05 4.45 0.00 3.32
261 262 1.135888 CGTATGTCGTCGACCTCAACA 60.136 52.381 22.05 9.80 34.52 3.33
262 263 1.129251 TCGTATGTCGTCGACCTCAAC 59.871 52.381 22.05 13.08 40.80 3.18
263 264 1.129251 GTCGTATGTCGTCGACCTCAA 59.871 52.381 22.05 4.23 46.83 3.02
264 265 0.723414 GTCGTATGTCGTCGACCTCA 59.277 55.000 22.05 9.78 46.83 3.86
265 266 3.505782 GTCGTATGTCGTCGACCTC 57.494 57.895 22.05 11.26 46.83 3.85
269 270 0.179243 CACGTGTCGTATGTCGTCGA 60.179 55.000 7.58 0.00 38.32 4.20
270 271 0.451628 ACACGTGTCGTATGTCGTCG 60.452 55.000 17.22 0.00 38.32 5.12
271 272 1.381100 CAACACGTGTCGTATGTCGTC 59.619 52.381 23.61 0.00 38.32 4.20
272 273 1.268692 ACAACACGTGTCGTATGTCGT 60.269 47.619 23.61 0.00 38.32 4.34
273 274 1.401530 ACAACACGTGTCGTATGTCG 58.598 50.000 23.61 5.81 38.32 4.35
274 275 3.047796 AGAACAACACGTGTCGTATGTC 58.952 45.455 23.61 11.70 40.60 3.06
275 276 3.047796 GAGAACAACACGTGTCGTATGT 58.952 45.455 23.61 19.28 40.60 2.29
276 277 3.305964 AGAGAACAACACGTGTCGTATG 58.694 45.455 23.61 18.58 40.60 2.39
277 278 3.637998 AGAGAACAACACGTGTCGTAT 57.362 42.857 23.61 9.49 40.60 3.06
278 279 3.058708 CCTAGAGAACAACACGTGTCGTA 60.059 47.826 23.61 0.00 40.60 3.43
279 280 2.287427 CCTAGAGAACAACACGTGTCGT 60.287 50.000 23.61 15.32 40.60 4.34
280 281 2.316792 CCTAGAGAACAACACGTGTCG 58.683 52.381 23.61 14.49 40.60 4.35
281 282 2.059541 GCCTAGAGAACAACACGTGTC 58.940 52.381 23.61 9.49 40.60 3.67
282 283 1.602165 CGCCTAGAGAACAACACGTGT 60.602 52.381 17.22 17.22 44.64 4.49
283 284 1.060713 CGCCTAGAGAACAACACGTG 58.939 55.000 15.48 15.48 0.00 4.49
284 285 0.666577 GCGCCTAGAGAACAACACGT 60.667 55.000 0.00 0.00 0.00 4.49
285 286 0.388649 AGCGCCTAGAGAACAACACG 60.389 55.000 2.29 0.00 0.00 4.49
286 287 1.351153 GAGCGCCTAGAGAACAACAC 58.649 55.000 2.29 0.00 0.00 3.32
287 288 0.246635 GGAGCGCCTAGAGAACAACA 59.753 55.000 2.29 0.00 0.00 3.33
288 289 0.460459 GGGAGCGCCTAGAGAACAAC 60.460 60.000 2.29 0.00 0.00 3.32
289 290 0.614979 AGGGAGCGCCTAGAGAACAA 60.615 55.000 2.29 0.00 0.00 2.83
290 291 1.000486 AGGGAGCGCCTAGAGAACA 60.000 57.895 2.29 0.00 0.00 3.18
291 292 1.737201 GAGGGAGCGCCTAGAGAAC 59.263 63.158 2.29 0.00 0.00 3.01
292 293 1.455959 GGAGGGAGCGCCTAGAGAA 60.456 63.158 2.29 0.00 0.00 2.87
293 294 2.196229 GGAGGGAGCGCCTAGAGA 59.804 66.667 2.29 0.00 0.00 3.10
294 295 3.291383 CGGAGGGAGCGCCTAGAG 61.291 72.222 2.29 0.00 0.00 2.43
295 296 2.642183 AATCGGAGGGAGCGCCTAGA 62.642 60.000 2.29 1.37 0.00 2.43
296 297 1.749334 AAATCGGAGGGAGCGCCTAG 61.749 60.000 2.29 0.00 0.00 3.02
297 298 1.335132 AAAATCGGAGGGAGCGCCTA 61.335 55.000 2.29 0.00 0.00 3.93
298 299 2.198304 AAAAATCGGAGGGAGCGCCT 62.198 55.000 2.29 0.00 0.00 5.52
299 300 1.749258 AAAAATCGGAGGGAGCGCC 60.749 57.895 2.29 0.00 0.00 6.53
300 301 3.905249 AAAAATCGGAGGGAGCGC 58.095 55.556 0.00 0.00 0.00 5.92
316 317 2.728922 ACGCGTGCGGAAAAATAAAAA 58.271 38.095 12.93 0.00 44.69 1.94
317 318 2.402640 ACGCGTGCGGAAAAATAAAA 57.597 40.000 12.93 0.00 44.69 1.52
318 319 2.402640 AACGCGTGCGGAAAAATAAA 57.597 40.000 14.98 0.00 44.69 1.40
319 320 2.402640 AAACGCGTGCGGAAAAATAA 57.597 40.000 14.98 0.00 44.69 1.40
320 321 2.308811 GAAAACGCGTGCGGAAAAATA 58.691 42.857 14.98 0.00 44.69 1.40
321 322 1.125270 GAAAACGCGTGCGGAAAAAT 58.875 45.000 14.98 0.00 44.69 1.82
322 323 1.194896 CGAAAACGCGTGCGGAAAAA 61.195 50.000 14.98 0.00 44.69 1.94
323 324 1.651730 CGAAAACGCGTGCGGAAAA 60.652 52.632 14.98 0.00 44.69 2.29
324 325 2.052941 CGAAAACGCGTGCGGAAA 60.053 55.556 14.98 0.00 44.69 3.13
325 326 4.003011 CCGAAAACGCGTGCGGAA 62.003 61.111 31.93 0.00 46.29 4.30
328 329 4.659874 AAGCCGAAAACGCGTGCG 62.660 61.111 14.98 17.33 46.03 5.34
329 330 1.476235 AAAAAGCCGAAAACGCGTGC 61.476 50.000 14.98 12.13 0.00 5.34
330 331 1.706597 CTAAAAAGCCGAAAACGCGTG 59.293 47.619 14.98 0.00 0.00 5.34
331 332 1.598601 TCTAAAAAGCCGAAAACGCGT 59.401 42.857 5.58 5.58 0.00 6.01
332 333 2.303707 TCTAAAAAGCCGAAAACGCG 57.696 45.000 3.53 3.53 0.00 6.01
333 334 2.914838 CCATCTAAAAAGCCGAAAACGC 59.085 45.455 0.00 0.00 0.00 4.84
334 335 4.155310 ACCATCTAAAAAGCCGAAAACG 57.845 40.909 0.00 0.00 0.00 3.60
335 336 6.838198 AAAACCATCTAAAAAGCCGAAAAC 57.162 33.333 0.00 0.00 0.00 2.43
364 365 2.294979 AGAAAAGACCGGTGACAAACC 58.705 47.619 14.63 0.00 46.60 3.27
365 366 3.497262 CCTAGAAAAGACCGGTGACAAAC 59.503 47.826 14.63 0.00 0.00 2.93
366 367 3.135167 ACCTAGAAAAGACCGGTGACAAA 59.865 43.478 14.63 0.00 0.00 2.83
367 368 2.701951 ACCTAGAAAAGACCGGTGACAA 59.298 45.455 14.63 0.00 0.00 3.18
368 369 2.322658 ACCTAGAAAAGACCGGTGACA 58.677 47.619 14.63 0.00 0.00 3.58
369 370 3.397849 AACCTAGAAAAGACCGGTGAC 57.602 47.619 14.63 0.00 0.00 3.67
370 371 4.383173 GAAAACCTAGAAAAGACCGGTGA 58.617 43.478 14.63 0.00 0.00 4.02
371 372 3.185797 CGAAAACCTAGAAAAGACCGGTG 59.814 47.826 14.63 0.00 0.00 4.94
372 373 3.070015 TCGAAAACCTAGAAAAGACCGGT 59.930 43.478 6.92 6.92 0.00 5.28
373 374 3.431233 GTCGAAAACCTAGAAAAGACCGG 59.569 47.826 0.00 0.00 0.00 5.28
374 375 4.053295 TGTCGAAAACCTAGAAAAGACCG 58.947 43.478 0.00 0.00 0.00 4.79
375 376 6.555812 AATGTCGAAAACCTAGAAAAGACC 57.444 37.500 0.00 0.00 0.00 3.85
376 377 7.913821 ACAAAATGTCGAAAACCTAGAAAAGAC 59.086 33.333 0.00 0.00 0.00 3.01
377 378 7.992008 ACAAAATGTCGAAAACCTAGAAAAGA 58.008 30.769 0.00 0.00 0.00 2.52
378 379 8.628882 AACAAAATGTCGAAAACCTAGAAAAG 57.371 30.769 0.00 0.00 0.00 2.27
379 380 8.989653 AAACAAAATGTCGAAAACCTAGAAAA 57.010 26.923 0.00 0.00 0.00 2.29
380 381 8.865001 CAAAACAAAATGTCGAAAACCTAGAAA 58.135 29.630 0.00 0.00 0.00 2.52
381 382 7.489757 CCAAAACAAAATGTCGAAAACCTAGAA 59.510 33.333 0.00 0.00 0.00 2.10
382 383 6.975772 CCAAAACAAAATGTCGAAAACCTAGA 59.024 34.615 0.00 0.00 0.00 2.43
383 384 6.975772 TCCAAAACAAAATGTCGAAAACCTAG 59.024 34.615 0.00 0.00 0.00 3.02
384 385 6.864342 TCCAAAACAAAATGTCGAAAACCTA 58.136 32.000 0.00 0.00 0.00 3.08
385 386 5.725362 TCCAAAACAAAATGTCGAAAACCT 58.275 33.333 0.00 0.00 0.00 3.50
386 387 6.410243 TTCCAAAACAAAATGTCGAAAACC 57.590 33.333 0.00 0.00 0.00 3.27
387 388 8.715191 TTTTTCCAAAACAAAATGTCGAAAAC 57.285 26.923 0.00 0.00 29.33 2.43
446 447 4.575885 CCATACCTCTCACGGAAGAAAAA 58.424 43.478 0.00 0.00 0.00 1.94
447 448 3.618997 GCCATACCTCTCACGGAAGAAAA 60.619 47.826 0.00 0.00 0.00 2.29
448 449 2.093658 GCCATACCTCTCACGGAAGAAA 60.094 50.000 0.00 0.00 0.00 2.52
449 450 1.480954 GCCATACCTCTCACGGAAGAA 59.519 52.381 0.00 0.00 0.00 2.52
450 451 1.112113 GCCATACCTCTCACGGAAGA 58.888 55.000 0.00 0.00 0.00 2.87
451 452 1.115467 AGCCATACCTCTCACGGAAG 58.885 55.000 0.00 0.00 0.00 3.46
452 453 1.568504 AAGCCATACCTCTCACGGAA 58.431 50.000 0.00 0.00 0.00 4.30
453 454 1.207089 CAAAGCCATACCTCTCACGGA 59.793 52.381 0.00 0.00 0.00 4.69
454 455 1.656652 CAAAGCCATACCTCTCACGG 58.343 55.000 0.00 0.00 0.00 4.94
455 456 1.009829 GCAAAGCCATACCTCTCACG 58.990 55.000 0.00 0.00 0.00 4.35
456 457 2.409948 AGCAAAGCCATACCTCTCAC 57.590 50.000 0.00 0.00 0.00 3.51
457 458 3.347216 GAAAGCAAAGCCATACCTCTCA 58.653 45.455 0.00 0.00 0.00 3.27
458 459 2.352960 CGAAAGCAAAGCCATACCTCTC 59.647 50.000 0.00 0.00 0.00 3.20
459 460 2.359900 CGAAAGCAAAGCCATACCTCT 58.640 47.619 0.00 0.00 0.00 3.69
460 461 2.832672 CGAAAGCAAAGCCATACCTC 57.167 50.000 0.00 0.00 0.00 3.85
479 480 1.071605 AGCAAAATCGTGTCTCTCGC 58.928 50.000 0.00 0.00 0.00 5.03
480 481 3.184379 TGAAAGCAAAATCGTGTCTCTCG 59.816 43.478 0.00 0.00 0.00 4.04
481 482 4.458708 GTGAAAGCAAAATCGTGTCTCTC 58.541 43.478 0.00 0.00 0.00 3.20
482 483 3.059597 CGTGAAAGCAAAATCGTGTCTCT 60.060 43.478 0.00 0.00 0.00 3.10
483 484 3.059868 TCGTGAAAGCAAAATCGTGTCTC 60.060 43.478 0.00 0.00 0.00 3.36
484 485 2.869801 TCGTGAAAGCAAAATCGTGTCT 59.130 40.909 0.00 0.00 0.00 3.41
485 486 3.059868 TCTCGTGAAAGCAAAATCGTGTC 60.060 43.478 0.00 0.00 0.00 3.67
486 487 2.869801 TCTCGTGAAAGCAAAATCGTGT 59.130 40.909 0.00 0.00 0.00 4.49
487 488 3.473367 CTCTCGTGAAAGCAAAATCGTG 58.527 45.455 0.00 0.00 0.00 4.35
488 489 2.480419 CCTCTCGTGAAAGCAAAATCGT 59.520 45.455 0.00 0.00 0.00 3.73
489 490 2.726066 GCCTCTCGTGAAAGCAAAATCG 60.726 50.000 4.73 0.00 0.00 3.34
490 491 2.226437 TGCCTCTCGTGAAAGCAAAATC 59.774 45.455 8.84 0.00 31.30 2.17
491 492 2.030805 GTGCCTCTCGTGAAAGCAAAAT 60.031 45.455 11.96 0.00 34.62 1.82
492 493 1.333619 GTGCCTCTCGTGAAAGCAAAA 59.666 47.619 11.96 0.00 34.62 2.44
493 494 0.944386 GTGCCTCTCGTGAAAGCAAA 59.056 50.000 11.96 0.00 34.62 3.68
494 495 0.179059 TGTGCCTCTCGTGAAAGCAA 60.179 50.000 11.96 3.11 34.62 3.91
495 496 0.179059 TTGTGCCTCTCGTGAAAGCA 60.179 50.000 7.54 7.54 31.63 3.91
496 497 0.235926 GTTGTGCCTCTCGTGAAAGC 59.764 55.000 2.99 2.99 0.00 3.51
497 498 0.868406 GGTTGTGCCTCTCGTGAAAG 59.132 55.000 0.00 0.00 0.00 2.62
498 499 0.878523 CGGTTGTGCCTCTCGTGAAA 60.879 55.000 0.00 0.00 34.25 2.69
499 500 1.300620 CGGTTGTGCCTCTCGTGAA 60.301 57.895 0.00 0.00 34.25 3.18
500 501 2.338620 CGGTTGTGCCTCTCGTGA 59.661 61.111 0.00 0.00 34.25 4.35
501 502 2.029073 ACGGTTGTGCCTCTCGTG 59.971 61.111 0.00 0.00 32.60 4.35
502 503 2.029073 CACGGTTGTGCCTCTCGT 59.971 61.111 0.00 0.00 39.67 4.18
605 606 2.559698 TCATGCCTCTCACGGAAAAA 57.440 45.000 0.00 0.00 0.00 1.94
606 607 2.787473 ATCATGCCTCTCACGGAAAA 57.213 45.000 0.00 0.00 0.00 2.29
607 608 2.787473 AATCATGCCTCTCACGGAAA 57.213 45.000 0.00 0.00 0.00 3.13
608 609 2.749076 CAAAATCATGCCTCTCACGGAA 59.251 45.455 0.00 0.00 0.00 4.30
609 610 2.358957 CAAAATCATGCCTCTCACGGA 58.641 47.619 0.00 0.00 0.00 4.69
610 611 1.202222 GCAAAATCATGCCTCTCACGG 60.202 52.381 0.00 0.00 40.49 4.94
611 612 2.184385 GCAAAATCATGCCTCTCACG 57.816 50.000 0.00 0.00 40.49 4.35
630 631 1.805945 CCGTTTCCTCTCGCGGAAG 60.806 63.158 6.13 3.71 46.33 3.46
631 632 2.260434 CCGTTTCCTCTCGCGGAA 59.740 61.111 6.13 0.00 46.33 4.30
633 634 0.947180 TTTTCCGTTTCCTCTCGCGG 60.947 55.000 6.13 0.00 44.95 6.46
634 635 0.863144 TTTTTCCGTTTCCTCTCGCG 59.137 50.000 0.00 0.00 0.00 5.87
635 636 1.197036 CCTTTTTCCGTTTCCTCTCGC 59.803 52.381 0.00 0.00 0.00 5.03
636 637 2.223377 CACCTTTTTCCGTTTCCTCTCG 59.777 50.000 0.00 0.00 0.00 4.04
637 638 3.211865 ACACCTTTTTCCGTTTCCTCTC 58.788 45.455 0.00 0.00 0.00 3.20
638 639 3.118000 AGACACCTTTTTCCGTTTCCTCT 60.118 43.478 0.00 0.00 0.00 3.69
639 640 3.003378 CAGACACCTTTTTCCGTTTCCTC 59.997 47.826 0.00 0.00 0.00 3.71
640 641 2.949644 CAGACACCTTTTTCCGTTTCCT 59.050 45.455 0.00 0.00 0.00 3.36
641 642 2.034179 CCAGACACCTTTTTCCGTTTCC 59.966 50.000 0.00 0.00 0.00 3.13
642 643 2.946990 TCCAGACACCTTTTTCCGTTTC 59.053 45.455 0.00 0.00 0.00 2.78
643 644 3.007473 TCCAGACACCTTTTTCCGTTT 57.993 42.857 0.00 0.00 0.00 3.60
644 645 2.721425 TCCAGACACCTTTTTCCGTT 57.279 45.000 0.00 0.00 0.00 4.44
645 646 2.951229 ATCCAGACACCTTTTTCCGT 57.049 45.000 0.00 0.00 0.00 4.69
646 647 4.941263 TGAATATCCAGACACCTTTTTCCG 59.059 41.667 0.00 0.00 0.00 4.30
647 648 6.238484 CGATGAATATCCAGACACCTTTTTCC 60.238 42.308 0.00 0.00 0.00 3.13
648 649 6.238484 CCGATGAATATCCAGACACCTTTTTC 60.238 42.308 0.00 0.00 0.00 2.29
649 650 5.590259 CCGATGAATATCCAGACACCTTTTT 59.410 40.000 0.00 0.00 0.00 1.94
650 651 5.126067 CCGATGAATATCCAGACACCTTTT 58.874 41.667 0.00 0.00 0.00 2.27
651 652 4.164221 ACCGATGAATATCCAGACACCTTT 59.836 41.667 0.00 0.00 0.00 3.11
652 653 3.711704 ACCGATGAATATCCAGACACCTT 59.288 43.478 0.00 0.00 0.00 3.50
653 654 3.070159 CACCGATGAATATCCAGACACCT 59.930 47.826 0.00 0.00 0.00 4.00
654 655 3.181465 ACACCGATGAATATCCAGACACC 60.181 47.826 0.00 0.00 0.00 4.16
655 656 4.051922 GACACCGATGAATATCCAGACAC 58.948 47.826 0.00 0.00 0.00 3.67
656 657 3.704061 TGACACCGATGAATATCCAGACA 59.296 43.478 0.00 0.00 0.00 3.41
657 658 4.051922 GTGACACCGATGAATATCCAGAC 58.948 47.826 0.00 0.00 0.00 3.51
661 662 3.050619 GACGTGACACCGATGAATATCC 58.949 50.000 0.00 0.00 0.00 2.59
664 665 3.014623 AGAGACGTGACACCGATGAATA 58.985 45.455 0.00 0.00 0.00 1.75
668 669 0.805614 AGAGAGACGTGACACCGATG 59.194 55.000 0.00 0.00 0.00 3.84
713 714 4.079212 ACAAATAGGACCAATACAGCCCAT 60.079 41.667 0.00 0.00 0.00 4.00
716 717 5.914898 AAACAAATAGGACCAATACAGCC 57.085 39.130 0.00 0.00 0.00 4.85
739 740 2.090999 AGCCCTTTGTCACCCCTAAAAA 60.091 45.455 0.00 0.00 0.00 1.94
740 741 1.501604 AGCCCTTTGTCACCCCTAAAA 59.498 47.619 0.00 0.00 0.00 1.52
741 742 1.154430 AGCCCTTTGTCACCCCTAAA 58.846 50.000 0.00 0.00 0.00 1.85
742 743 0.404040 CAGCCCTTTGTCACCCCTAA 59.596 55.000 0.00 0.00 0.00 2.69
743 744 1.497309 CCAGCCCTTTGTCACCCCTA 61.497 60.000 0.00 0.00 0.00 3.53
744 745 2.845345 CCAGCCCTTTGTCACCCCT 61.845 63.158 0.00 0.00 0.00 4.79
745 746 2.155197 ATCCAGCCCTTTGTCACCCC 62.155 60.000 0.00 0.00 0.00 4.95
746 747 0.681243 GATCCAGCCCTTTGTCACCC 60.681 60.000 0.00 0.00 0.00 4.61
747 748 0.329596 AGATCCAGCCCTTTGTCACC 59.670 55.000 0.00 0.00 0.00 4.02
748 749 2.501723 TCTAGATCCAGCCCTTTGTCAC 59.498 50.000 0.00 0.00 0.00 3.67
749 750 2.501723 GTCTAGATCCAGCCCTTTGTCA 59.498 50.000 0.00 0.00 0.00 3.58
761 762 1.071385 CATGCCCAGTGGTCTAGATCC 59.929 57.143 8.74 2.60 0.00 3.36
811 816 1.750399 CCCAATGGGCGAGTTGAGG 60.750 63.158 4.89 0.00 35.35 3.86
928 960 2.823829 GATGGGATTGGTCGTGCGC 61.824 63.158 0.00 0.00 0.00 6.09
953 988 1.682344 TTGGCTGCTCTCTCGCCTA 60.682 57.895 0.00 0.00 44.09 3.93
961 996 2.659610 GAGACGGTTGGCTGCTCT 59.340 61.111 0.00 0.00 0.00 4.09
1123 1158 4.451150 GGACATCTCGTGCGGGCA 62.451 66.667 0.00 0.00 0.00 5.36
1218 1275 2.368439 CATCCCAAATCGAAGAAGCCA 58.632 47.619 0.00 0.00 43.58 4.75
1236 1294 1.619432 CCCACCACAATTAGCCACCAT 60.619 52.381 0.00 0.00 0.00 3.55
1245 1303 0.948678 CGAACGAACCCACCACAATT 59.051 50.000 0.00 0.00 0.00 2.32
1468 1590 4.898829 TCCATAGAAAACATGGCAATCG 57.101 40.909 0.00 0.00 42.36 3.34
1513 1637 0.613260 AATCGCACAACCTCTGGCTA 59.387 50.000 0.00 0.00 0.00 3.93
1549 1673 5.391310 CCAACAATGCATCAGACTGACTAAC 60.391 44.000 7.47 0.00 0.00 2.34
1552 1676 3.079578 CCAACAATGCATCAGACTGACT 58.920 45.455 7.47 0.00 0.00 3.41
1576 1773 3.131933 CACCAACTGAAACAACCCATTGA 59.868 43.478 0.00 0.00 39.30 2.57
1632 1842 5.358922 CACCTTTGTGAAAACAATCCACAT 58.641 37.500 0.00 0.00 45.76 3.21
1646 1856 3.389656 ACCCCAATAAAACCACCTTTGTG 59.610 43.478 0.00 0.00 42.39 3.33
1671 1881 5.783111 ACAGTGAATTCAGCCAAATTAACC 58.217 37.500 8.80 0.00 32.43 2.85
1714 2128 4.836825 TGAGTTCATGGGAAAGAGCTAAG 58.163 43.478 0.00 0.00 34.13 2.18
1726 2140 3.630769 CCACAAGGATCATGAGTTCATGG 59.369 47.826 19.05 1.03 44.83 3.66
1831 2274 7.947782 AATATGGACCAGAGGGAGTATTTTA 57.052 36.000 0.00 0.00 38.05 1.52
1834 2277 8.386264 CAATTAATATGGACCAGAGGGAGTATT 58.614 37.037 0.00 0.06 38.05 1.89
1836 2279 6.849697 ACAATTAATATGGACCAGAGGGAGTA 59.150 38.462 0.00 0.00 38.05 2.59
1837 2280 5.672194 ACAATTAATATGGACCAGAGGGAGT 59.328 40.000 0.00 0.00 38.05 3.85
1838 2281 6.192970 ACAATTAATATGGACCAGAGGGAG 57.807 41.667 0.00 0.00 38.05 4.30
1839 2282 7.888514 ATACAATTAATATGGACCAGAGGGA 57.111 36.000 0.00 0.00 38.05 4.20
1840 2283 9.449719 GTAATACAATTAATATGGACCAGAGGG 57.550 37.037 0.00 0.00 41.29 4.30
1880 2323 8.321621 TCCAATCCAAATTAATTGTCATGGAT 57.678 30.769 19.75 19.75 46.72 3.41
1881 2324 7.147689 CCTCCAATCCAAATTAATTGTCATGGA 60.148 37.037 17.58 17.58 40.90 3.41
1882 2325 6.987992 CCTCCAATCCAAATTAATTGTCATGG 59.012 38.462 9.50 9.50 37.32 3.66
1883 2326 6.987992 CCCTCCAATCCAAATTAATTGTCATG 59.012 38.462 0.39 0.00 37.32 3.07
1884 2327 6.902416 TCCCTCCAATCCAAATTAATTGTCAT 59.098 34.615 0.39 0.00 37.32 3.06
1885 2328 6.259893 TCCCTCCAATCCAAATTAATTGTCA 58.740 36.000 0.39 0.00 37.32 3.58
1886 2329 6.381133 ACTCCCTCCAATCCAAATTAATTGTC 59.619 38.462 0.39 0.00 37.32 3.18
1887 2330 6.263754 ACTCCCTCCAATCCAAATTAATTGT 58.736 36.000 0.39 0.00 37.32 2.71
1888 2331 6.796785 ACTCCCTCCAATCCAAATTAATTG 57.203 37.500 0.39 0.00 38.84 2.32
1890 2333 9.588096 GTATTACTCCCTCCAATCCAAATTAAT 57.412 33.333 0.00 0.00 0.00 1.40
1891 2334 8.787818 AGTATTACTCCCTCCAATCCAAATTAA 58.212 33.333 0.00 0.00 0.00 1.40
1892 2335 8.344939 AGTATTACTCCCTCCAATCCAAATTA 57.655 34.615 0.00 0.00 0.00 1.40
1893 2336 7.226059 AGTATTACTCCCTCCAATCCAAATT 57.774 36.000 0.00 0.00 0.00 1.82
1894 2337 6.848562 AGTATTACTCCCTCCAATCCAAAT 57.151 37.500 0.00 0.00 0.00 2.32
1895 2338 6.447084 AGAAGTATTACTCCCTCCAATCCAAA 59.553 38.462 0.00 0.00 0.00 3.28
1896 2339 5.970640 AGAAGTATTACTCCCTCCAATCCAA 59.029 40.000 0.00 0.00 0.00 3.53
1897 2340 5.538877 AGAAGTATTACTCCCTCCAATCCA 58.461 41.667 0.00 0.00 0.00 3.41
1898 2341 6.502074 AAGAAGTATTACTCCCTCCAATCC 57.498 41.667 0.00 0.00 0.00 3.01
1899 2342 8.706521 ACTAAAGAAGTATTACTCCCTCCAATC 58.293 37.037 0.00 0.00 36.36 2.67
1900 2343 8.625467 ACTAAAGAAGTATTACTCCCTCCAAT 57.375 34.615 0.00 0.00 36.36 3.16
1901 2344 8.445361 AACTAAAGAAGTATTACTCCCTCCAA 57.555 34.615 0.00 0.00 37.50 3.53
1902 2345 7.899709 AGAACTAAAGAAGTATTACTCCCTCCA 59.100 37.037 0.00 0.00 37.50 3.86
1903 2346 8.198778 CAGAACTAAAGAAGTATTACTCCCTCC 58.801 40.741 0.00 0.00 37.50 4.30
1904 2347 7.707464 GCAGAACTAAAGAAGTATTACTCCCTC 59.293 40.741 0.00 0.00 37.50 4.30
1905 2348 7.180408 TGCAGAACTAAAGAAGTATTACTCCCT 59.820 37.037 0.00 0.00 37.50 4.20
1906 2349 7.278203 GTGCAGAACTAAAGAAGTATTACTCCC 59.722 40.741 0.00 0.00 37.50 4.30
1907 2350 7.817962 TGTGCAGAACTAAAGAAGTATTACTCC 59.182 37.037 0.00 0.00 37.50 3.85
1908 2351 8.758633 TGTGCAGAACTAAAGAAGTATTACTC 57.241 34.615 0.00 0.00 37.50 2.59
1909 2352 9.209175 CTTGTGCAGAACTAAAGAAGTATTACT 57.791 33.333 0.00 0.00 37.50 2.24
1910 2353 9.204570 TCTTGTGCAGAACTAAAGAAGTATTAC 57.795 33.333 0.00 0.00 37.50 1.89
1935 2378 7.144722 TCAGTAACAACAATGACCATCAATC 57.855 36.000 0.00 0.00 0.00 2.67
2210 2678 2.109181 GGAGATCCCCGGCTTTCG 59.891 66.667 0.00 0.00 38.88 3.46
2256 2724 7.913789 AGTGTACTGTTTATATTGGGAACTCA 58.086 34.615 0.00 0.00 0.00 3.41
2512 2981 2.550830 ACAAACCACCAGCTCTACTG 57.449 50.000 0.00 0.00 46.77 2.74
2513 2982 2.029290 CGTACAAACCACCAGCTCTACT 60.029 50.000 0.00 0.00 0.00 2.57
2514 2983 2.288640 ACGTACAAACCACCAGCTCTAC 60.289 50.000 0.00 0.00 0.00 2.59
2527 3017 3.942748 ACTTCAAGCTGGAAACGTACAAA 59.057 39.130 4.77 0.00 0.00 2.83
2614 3127 2.745698 CACAGCCTGCTGACCTGA 59.254 61.111 24.88 0.00 46.30 3.86
2629 3142 1.927174 CAGCAACTACAGATACGCCAC 59.073 52.381 0.00 0.00 0.00 5.01
2739 3252 5.071519 CACCAAGATCCTCTGGAGACATTAT 59.928 44.000 11.94 0.00 41.51 1.28
3046 3581 3.501950 GGAAAAAGTGCTAGAATTGCCG 58.498 45.455 0.00 0.00 0.00 5.69
3171 3997 5.939764 TTCTAACAGACTACATCCATGCT 57.060 39.130 0.00 0.00 0.00 3.79
3186 4012 9.926158 AACATGCATAAAACAATCATTCTAACA 57.074 25.926 0.00 0.00 0.00 2.41
3209 4035 2.038557 GGACTAGGTTGGCAGAAGAACA 59.961 50.000 0.00 0.00 0.00 3.18
3261 4087 1.578206 GAAGGAAAGGCAGACACGGC 61.578 60.000 0.00 0.00 0.00 5.68
3352 4191 0.538057 TGAACAGAAGGCCCTGCAAG 60.538 55.000 8.77 0.00 37.68 4.01
3436 4275 7.278646 TCCTTGATGTTTCGAAGTGATTCTATG 59.721 37.037 0.00 0.00 0.00 2.23
3535 4374 2.093764 CCGAGCAAGATTCTTCACTCCT 60.094 50.000 15.47 1.94 0.00 3.69
3576 4415 5.247792 TCCATCCTAGATGAGGTTCATGATG 59.752 44.000 6.15 3.85 46.76 3.07
3718 4602 4.450419 CAGGAAACAGAAGTAGTTGCTCTG 59.550 45.833 0.00 0.00 34.85 3.35
3818 4704 8.585436 GCTAGTAAGAAGTAAGAAGTAAAAGCG 58.415 37.037 0.00 0.00 0.00 4.68
3889 4775 4.874970 TCGGACCTTTTGACACTTAGTAC 58.125 43.478 0.00 0.00 0.00 2.73
3894 4781 2.949644 CCTTTCGGACCTTTTGACACTT 59.050 45.455 0.00 0.00 0.00 3.16
3909 4796 7.377766 TCATCTTCTTTTCCATTACCTTTCG 57.622 36.000 0.00 0.00 0.00 3.46
3990 4885 5.643777 GCTATGAAATGTGTGTTAGGTGAGT 59.356 40.000 0.00 0.00 0.00 3.41
4045 5259 3.135225 GCCTGTGTGTGTGTGTGTATAA 58.865 45.455 0.00 0.00 0.00 0.98
4047 5261 1.134250 TGCCTGTGTGTGTGTGTGTAT 60.134 47.619 0.00 0.00 0.00 2.29
4048 5262 0.250513 TGCCTGTGTGTGTGTGTGTA 59.749 50.000 0.00 0.00 0.00 2.90
4049 5263 1.002746 TGCCTGTGTGTGTGTGTGT 60.003 52.632 0.00 0.00 0.00 3.72
4050 5264 1.304509 TGTGCCTGTGTGTGTGTGTG 61.305 55.000 0.00 0.00 0.00 3.82
4098 5430 7.044181 ACATGATATTCACTTGTGTACAGAGG 58.956 38.462 0.00 0.00 0.00 3.69
4133 5465 1.333931 CATCCATGTGCTGATGTGCTC 59.666 52.381 0.00 0.00 34.90 4.26
4136 5468 3.938653 GCATCCATGTGCTGATGTG 57.061 52.632 10.24 0.00 41.82 3.21
4204 5553 1.071987 CTGAACTGCAGCTGGGTCA 59.928 57.895 17.12 12.97 37.90 4.02
4415 5776 1.375523 CTACAACCCGGCAGTGACC 60.376 63.158 0.00 0.00 0.00 4.02
4419 5780 4.388499 CGGCTACAACCCGGCAGT 62.388 66.667 0.00 0.00 41.99 4.40
4455 5816 0.384309 AGCTGATCATGCAATTGCGG 59.616 50.000 24.58 18.92 45.83 5.69
4457 5818 3.050619 GCTAAGCTGATCATGCAATTGC 58.949 45.455 23.69 23.69 42.50 3.56
4460 5821 6.002082 TCTTATGCTAAGCTGATCATGCAAT 58.998 36.000 16.20 9.14 34.07 3.56
4485 5846 8.142551 ACAGTCGAATTCTTACACTTCTTAAGT 58.857 33.333 3.52 0.00 44.06 2.24
4486 5847 8.522178 ACAGTCGAATTCTTACACTTCTTAAG 57.478 34.615 3.52 0.00 0.00 1.85
4487 5848 8.882415 AACAGTCGAATTCTTACACTTCTTAA 57.118 30.769 3.52 0.00 0.00 1.85
4488 5849 8.761497 CAAACAGTCGAATTCTTACACTTCTTA 58.239 33.333 3.52 0.00 0.00 2.10
4489 5850 7.494625 TCAAACAGTCGAATTCTTACACTTCTT 59.505 33.333 3.52 0.00 0.00 2.52
4490 5851 6.984474 TCAAACAGTCGAATTCTTACACTTCT 59.016 34.615 3.52 0.00 0.00 2.85
4491 5852 7.173863 TCAAACAGTCGAATTCTTACACTTC 57.826 36.000 3.52 0.00 0.00 3.01
4492 5853 7.730364 ATCAAACAGTCGAATTCTTACACTT 57.270 32.000 3.52 0.00 0.00 3.16
4505 5866 7.431960 TGTCAAGAATTTCAAATCAAACAGTCG 59.568 33.333 0.00 0.00 0.00 4.18
4526 5887 7.093354 GTCTCTAGAACACATGATCTTGTCAA 58.907 38.462 11.10 0.00 40.97 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.