Multiple sequence alignment - TraesCS5D01G513100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G513100 chr5D 100.000 5359 0 0 1 5359 537226375 537221017 0.000000e+00 9897.0
1 TraesCS5D01G513100 chr5D 80.379 1743 297 35 2646 4363 458181772 458180050 0.000000e+00 1282.0
2 TraesCS5D01G513100 chr5D 88.999 809 87 2 3572 4379 458095577 458094770 0.000000e+00 1000.0
3 TraesCS5D01G513100 chr5D 86.902 878 103 8 2643 3510 458096560 458095685 0.000000e+00 974.0
4 TraesCS5D01G513100 chr5D 79.041 1064 127 61 1372 2413 458097594 458096605 4.530000e-180 641.0
5 TraesCS5D01G513100 chr5D 75.791 632 107 36 1786 2413 458182536 458181947 1.470000e-70 278.0
6 TraesCS5D01G513100 chr5D 84.071 226 28 5 1462 1683 458182850 458182629 1.510000e-50 211.0
7 TraesCS5D01G513100 chr5D 80.368 163 24 6 1040 1201 458098041 458097886 3.390000e-22 117.0
8 TraesCS5D01G513100 chr5B 94.175 4927 137 58 478 5359 677822542 677817721 0.000000e+00 7371.0
9 TraesCS5D01G513100 chr5B 87.170 1707 163 30 2820 4471 560443006 560441301 0.000000e+00 1888.0
10 TraesCS5D01G513100 chr5B 83.285 688 113 2 2824 3510 561063343 561062657 2.720000e-177 632.0
11 TraesCS5D01G513100 chr5B 78.531 1062 145 52 1372 2413 560444251 560443253 5.900000e-174 621.0
12 TraesCS5D01G513100 chr5B 79.630 594 81 29 1462 2044 561064559 561063995 1.810000e-104 390.0
13 TraesCS5D01G513100 chr5B 89.011 182 17 1 1506 1687 560732080 560731902 6.990000e-54 222.0
14 TraesCS5D01G513100 chr5B 80.982 163 23 6 1040 1201 560444634 560444479 7.290000e-24 122.0
15 TraesCS5D01G513100 chr5A 84.992 1999 240 39 2643 4595 575707773 575705789 0.000000e+00 1975.0
16 TraesCS5D01G513100 chr5A 80.693 1559 275 19 2824 4363 576086424 576084873 0.000000e+00 1188.0
17 TraesCS5D01G513100 chr5A 80.693 1559 275 19 2824 4363 576271007 576272558 0.000000e+00 1188.0
18 TraesCS5D01G513100 chr5A 79.408 1554 300 18 2824 4363 575902579 575901032 0.000000e+00 1079.0
19 TraesCS5D01G513100 chr5A 79.022 1063 135 52 1372 2413 575708813 575707818 0.000000e+00 647.0
20 TraesCS5D01G513100 chr5A 75.731 581 105 26 1787 2358 575903535 575902982 5.320000e-65 259.0
21 TraesCS5D01G513100 chr5A 85.892 241 26 4 1786 2025 576087466 576087233 3.200000e-62 250.0
22 TraesCS5D01G513100 chr5A 91.209 182 13 1 1506 1687 575903787 575903609 1.490000e-60 244.0
23 TraesCS5D01G513100 chr5A 85.398 226 25 5 1462 1683 576087784 576087563 1.500000e-55 228.0
24 TraesCS5D01G513100 chr5A 86.364 110 12 3 281 387 540320805 540320696 3.390000e-22 117.0
25 TraesCS5D01G513100 chr4A 93.069 1010 57 2 3582 4578 632944753 632943744 0.000000e+00 1465.0
26 TraesCS5D01G513100 chr4A 89.640 917 66 20 2619 3510 632945756 632944844 0.000000e+00 1140.0
27 TraesCS5D01G513100 chr4A 82.225 782 125 14 3586 4360 584679905 584680679 0.000000e+00 662.0
28 TraesCS5D01G513100 chr4A 82.225 782 125 14 3586 4360 584735022 584734248 0.000000e+00 662.0
29 TraesCS5D01G513100 chr4A 80.317 757 93 30 1739 2477 632949971 632949253 6.150000e-144 521.0
30 TraesCS5D01G513100 chr4A 89.058 329 30 3 1357 1685 632950414 632950092 2.320000e-108 403.0
31 TraesCS5D01G513100 chr4A 86.246 349 29 10 980 1314 632951290 632950947 1.420000e-95 361.0
32 TraesCS5D01G513100 chr4A 91.429 70 6 0 855 924 632951368 632951299 4.420000e-16 97.1
33 TraesCS5D01G513100 chr3B 82.301 791 130 7 3583 4366 43233459 43232672 0.000000e+00 676.0
34 TraesCS5D01G513100 chr4B 76.220 1148 229 36 3244 4360 27396732 27395598 7.790000e-158 568.0
35 TraesCS5D01G513100 chr4B 96.970 33 1 0 1 33 213141296 213141264 7.500000e-04 56.5
36 TraesCS5D01G513100 chrUn 84.000 225 30 6 293 512 314819658 314819435 1.510000e-50 211.0
37 TraesCS5D01G513100 chr6B 84.000 225 30 6 293 512 2514146 2513923 1.510000e-50 211.0
38 TraesCS5D01G513100 chr6B 84.000 225 30 6 293 512 2525774 2525551 1.510000e-50 211.0
39 TraesCS5D01G513100 chr6B 84.000 225 30 6 293 512 2537921 2537698 1.510000e-50 211.0
40 TraesCS5D01G513100 chr6B 100.000 30 0 0 298 327 77460000 77459971 7.500000e-04 56.5
41 TraesCS5D01G513100 chr3A 100.000 34 0 0 1 34 174290188 174290221 4.480000e-06 63.9
42 TraesCS5D01G513100 chr4D 90.476 42 4 0 2750 2791 301735423 301735464 7.500000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G513100 chr5D 537221017 537226375 5358 True 9897.000000 9897 100.000000 1 5359 1 chr5D.!!$R1 5358
1 TraesCS5D01G513100 chr5D 458094770 458098041 3271 True 683.000000 1000 83.827500 1040 4379 4 chr5D.!!$R2 3339
2 TraesCS5D01G513100 chr5D 458180050 458182850 2800 True 590.333333 1282 80.080333 1462 4363 3 chr5D.!!$R3 2901
3 TraesCS5D01G513100 chr5B 677817721 677822542 4821 True 7371.000000 7371 94.175000 478 5359 1 chr5B.!!$R2 4881
4 TraesCS5D01G513100 chr5B 560441301 560444634 3333 True 877.000000 1888 82.227667 1040 4471 3 chr5B.!!$R3 3431
5 TraesCS5D01G513100 chr5B 561062657 561064559 1902 True 511.000000 632 81.457500 1462 3510 2 chr5B.!!$R4 2048
6 TraesCS5D01G513100 chr5A 575705789 575708813 3024 True 1311.000000 1975 82.007000 1372 4595 2 chr5A.!!$R2 3223
7 TraesCS5D01G513100 chr5A 576271007 576272558 1551 False 1188.000000 1188 80.693000 2824 4363 1 chr5A.!!$F1 1539
8 TraesCS5D01G513100 chr5A 576084873 576087784 2911 True 555.333333 1188 83.994333 1462 4363 3 chr5A.!!$R4 2901
9 TraesCS5D01G513100 chr5A 575901032 575903787 2755 True 527.333333 1079 82.116000 1506 4363 3 chr5A.!!$R3 2857
10 TraesCS5D01G513100 chr4A 632943744 632951368 7624 True 664.516667 1465 88.293167 855 4578 6 chr4A.!!$R2 3723
11 TraesCS5D01G513100 chr4A 584679905 584680679 774 False 662.000000 662 82.225000 3586 4360 1 chr4A.!!$F1 774
12 TraesCS5D01G513100 chr4A 584734248 584735022 774 True 662.000000 662 82.225000 3586 4360 1 chr4A.!!$R1 774
13 TraesCS5D01G513100 chr3B 43232672 43233459 787 True 676.000000 676 82.301000 3583 4366 1 chr3B.!!$R1 783
14 TraesCS5D01G513100 chr4B 27395598 27396732 1134 True 568.000000 568 76.220000 3244 4360 1 chr4B.!!$R1 1116

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.031449 TTGCTTTTACCACGCTTGCC 59.969 50.000 0.00 0.00 0.00 4.52 F
672 675 0.109086 CCACGTGCCTCTGACTGTAG 60.109 60.000 10.91 0.00 0.00 2.74 F
675 678 0.174389 CGTGCCTCTGACTGTAGCAT 59.826 55.000 0.00 0.00 35.62 3.79 F
908 911 0.318441 TTGGTCTTGGAGCTCTCACG 59.682 55.000 14.64 7.91 0.00 4.35 F
1080 1096 0.755698 TCCCTAAGAAGGCGCTCGAT 60.756 55.000 7.64 0.00 42.14 3.59 F
1623 2141 1.081376 CGTCTTCGTCGCCAACTCT 60.081 57.895 0.00 0.00 0.00 3.24 F
1662 2180 1.167851 AGTACAGCTACAACCGCGTA 58.832 50.000 4.92 0.00 0.00 4.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1431 1943 0.612229 TCAGCAGGCTCTTCTTCAGG 59.388 55.000 0.00 0.00 0.00 3.86 R
2162 2791 1.007734 GAACTGCTCGTCACGTGGA 60.008 57.895 17.00 4.94 0.00 4.02 R
2296 2931 3.516615 GTGTAGAGCTTGAGGATGTCAC 58.483 50.000 0.00 0.00 33.71 3.67 R
2816 6861 4.077188 GAACTCCTGCACGCACGC 62.077 66.667 0.00 0.00 0.00 5.34 R
3412 7583 3.884774 TGCTTGCCCGGGAACACT 61.885 61.111 29.31 0.00 0.00 3.55 R
3686 7948 0.542938 AGTCTGCTACCCACTGCTCA 60.543 55.000 0.00 0.00 0.00 4.26 R
4490 8806 3.852286 ACGACGATGCATTAACCAGTAA 58.148 40.909 0.00 0.00 0.00 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.552604 TTGAGATTGCTTTTACCACGC 57.447 42.857 0.00 0.00 0.00 5.34
21 22 2.778299 TGAGATTGCTTTTACCACGCT 58.222 42.857 0.00 0.00 0.00 5.07
22 23 3.146066 TGAGATTGCTTTTACCACGCTT 58.854 40.909 0.00 0.00 0.00 4.68
23 24 3.058293 TGAGATTGCTTTTACCACGCTTG 60.058 43.478 0.00 0.00 0.00 4.01
24 25 1.985684 GATTGCTTTTACCACGCTTGC 59.014 47.619 0.00 0.00 0.00 4.01
25 26 0.031449 TTGCTTTTACCACGCTTGCC 59.969 50.000 0.00 0.00 0.00 4.52
26 27 1.442017 GCTTTTACCACGCTTGCCG 60.442 57.895 0.00 0.00 44.21 5.69
27 28 1.442017 CTTTTACCACGCTTGCCGC 60.442 57.895 0.00 0.00 41.76 6.53
36 37 3.802507 GCTTGCCGCGTGGTAATA 58.197 55.556 19.09 0.00 39.28 0.98
37 38 2.317230 GCTTGCCGCGTGGTAATAT 58.683 52.632 19.09 0.00 39.28 1.28
38 39 0.661020 GCTTGCCGCGTGGTAATATT 59.339 50.000 19.09 0.00 39.28 1.28
39 40 1.333791 GCTTGCCGCGTGGTAATATTC 60.334 52.381 19.09 5.54 39.28 1.75
40 41 2.210116 CTTGCCGCGTGGTAATATTCT 58.790 47.619 19.09 0.00 39.28 2.40
41 42 2.319136 TGCCGCGTGGTAATATTCTT 57.681 45.000 17.91 0.00 37.67 2.52
42 43 2.634600 TGCCGCGTGGTAATATTCTTT 58.365 42.857 17.91 0.00 37.67 2.52
43 44 3.011119 TGCCGCGTGGTAATATTCTTTT 58.989 40.909 17.91 0.00 37.67 2.27
44 45 3.064271 TGCCGCGTGGTAATATTCTTTTC 59.936 43.478 17.91 0.00 37.67 2.29
45 46 3.311596 GCCGCGTGGTAATATTCTTTTCT 59.688 43.478 17.91 0.00 37.67 2.52
46 47 4.201881 GCCGCGTGGTAATATTCTTTTCTT 60.202 41.667 17.91 0.00 37.67 2.52
47 48 5.675323 GCCGCGTGGTAATATTCTTTTCTTT 60.675 40.000 17.91 0.00 37.67 2.52
48 49 6.319399 CCGCGTGGTAATATTCTTTTCTTTT 58.681 36.000 6.91 0.00 0.00 2.27
49 50 7.465989 CCGCGTGGTAATATTCTTTTCTTTTA 58.534 34.615 6.91 0.00 0.00 1.52
50 51 7.427318 CCGCGTGGTAATATTCTTTTCTTTTAC 59.573 37.037 6.91 0.00 0.00 2.01
51 52 8.173130 CGCGTGGTAATATTCTTTTCTTTTACT 58.827 33.333 0.00 0.00 0.00 2.24
52 53 9.836076 GCGTGGTAATATTCTTTTCTTTTACTT 57.164 29.630 0.00 0.00 0.00 2.24
59 60 6.877611 ATTCTTTTCTTTTACTTGGCTCGA 57.122 33.333 0.00 0.00 0.00 4.04
60 61 6.877611 TTCTTTTCTTTTACTTGGCTCGAT 57.122 33.333 0.00 0.00 0.00 3.59
61 62 6.241207 TCTTTTCTTTTACTTGGCTCGATG 57.759 37.500 0.00 0.00 0.00 3.84
62 63 4.419522 TTTCTTTTACTTGGCTCGATGC 57.580 40.909 0.00 0.00 41.94 3.91
63 64 3.052455 TCTTTTACTTGGCTCGATGCA 57.948 42.857 8.71 0.00 45.15 3.96
64 65 3.609853 TCTTTTACTTGGCTCGATGCAT 58.390 40.909 0.00 0.00 45.15 3.96
65 66 4.009675 TCTTTTACTTGGCTCGATGCATT 58.990 39.130 0.00 0.00 45.15 3.56
66 67 4.458989 TCTTTTACTTGGCTCGATGCATTT 59.541 37.500 0.00 0.00 45.15 2.32
67 68 5.645929 TCTTTTACTTGGCTCGATGCATTTA 59.354 36.000 0.00 0.00 45.15 1.40
68 69 5.888691 TTTACTTGGCTCGATGCATTTAA 57.111 34.783 0.00 0.00 45.15 1.52
69 70 6.449635 TTTACTTGGCTCGATGCATTTAAT 57.550 33.333 0.00 0.00 45.15 1.40
70 71 4.558538 ACTTGGCTCGATGCATTTAATC 57.441 40.909 0.00 0.00 45.15 1.75
71 72 3.947196 ACTTGGCTCGATGCATTTAATCA 59.053 39.130 0.00 0.00 45.15 2.57
72 73 4.036027 ACTTGGCTCGATGCATTTAATCAG 59.964 41.667 0.00 0.00 45.15 2.90
73 74 2.291465 TGGCTCGATGCATTTAATCAGC 59.709 45.455 0.00 2.49 45.15 4.26
74 75 2.551459 GGCTCGATGCATTTAATCAGCT 59.449 45.455 0.00 0.00 45.15 4.24
75 76 3.004106 GGCTCGATGCATTTAATCAGCTT 59.996 43.478 0.00 0.00 45.15 3.74
76 77 3.973135 GCTCGATGCATTTAATCAGCTTG 59.027 43.478 0.00 0.00 42.31 4.01
77 78 4.497006 GCTCGATGCATTTAATCAGCTTGT 60.497 41.667 0.00 0.00 42.31 3.16
78 79 5.277490 GCTCGATGCATTTAATCAGCTTGTA 60.277 40.000 0.00 0.00 42.31 2.41
79 80 6.048073 TCGATGCATTTAATCAGCTTGTAC 57.952 37.500 0.00 0.00 0.00 2.90
80 81 5.007626 TCGATGCATTTAATCAGCTTGTACC 59.992 40.000 0.00 0.00 0.00 3.34
81 82 5.220835 CGATGCATTTAATCAGCTTGTACCA 60.221 40.000 0.00 0.00 0.00 3.25
82 83 6.513884 CGATGCATTTAATCAGCTTGTACCAT 60.514 38.462 0.00 0.00 0.00 3.55
83 84 6.528537 TGCATTTAATCAGCTTGTACCATT 57.471 33.333 0.00 0.00 0.00 3.16
84 85 7.637631 TGCATTTAATCAGCTTGTACCATTA 57.362 32.000 0.00 0.00 0.00 1.90
85 86 7.706159 TGCATTTAATCAGCTTGTACCATTAG 58.294 34.615 0.00 0.00 0.00 1.73
86 87 7.555914 TGCATTTAATCAGCTTGTACCATTAGA 59.444 33.333 0.00 0.00 0.00 2.10
87 88 7.857885 GCATTTAATCAGCTTGTACCATTAGAC 59.142 37.037 0.00 0.00 0.00 2.59
88 89 7.534085 TTTAATCAGCTTGTACCATTAGACG 57.466 36.000 0.00 0.00 0.00 4.18
89 90 4.737855 ATCAGCTTGTACCATTAGACGT 57.262 40.909 0.00 0.00 0.00 4.34
90 91 5.847111 ATCAGCTTGTACCATTAGACGTA 57.153 39.130 0.00 0.00 0.00 3.57
91 92 5.648178 TCAGCTTGTACCATTAGACGTAA 57.352 39.130 0.00 0.00 0.00 3.18
107 108 2.440501 CGTAAGTCGCCATCAAAATGC 58.559 47.619 0.00 0.00 0.00 3.56
108 109 2.159585 CGTAAGTCGCCATCAAAATGCA 60.160 45.455 0.00 0.00 0.00 3.96
109 110 3.487376 CGTAAGTCGCCATCAAAATGCAT 60.487 43.478 0.00 0.00 0.00 3.96
110 111 2.857592 AGTCGCCATCAAAATGCATC 57.142 45.000 0.00 0.00 0.00 3.91
111 112 1.064505 AGTCGCCATCAAAATGCATCG 59.935 47.619 0.00 0.00 0.00 3.84
112 113 1.093972 TCGCCATCAAAATGCATCGT 58.906 45.000 0.00 0.00 0.00 3.73
113 114 1.472082 TCGCCATCAAAATGCATCGTT 59.528 42.857 0.00 0.00 0.00 3.85
114 115 1.584761 CGCCATCAAAATGCATCGTTG 59.415 47.619 14.15 14.15 0.00 4.10
115 116 2.609350 GCCATCAAAATGCATCGTTGT 58.391 42.857 17.86 7.31 0.00 3.32
116 117 2.599973 GCCATCAAAATGCATCGTTGTC 59.400 45.455 17.86 7.05 0.00 3.18
117 118 3.181397 CCATCAAAATGCATCGTTGTCC 58.819 45.455 17.86 0.00 0.00 4.02
118 119 3.119388 CCATCAAAATGCATCGTTGTCCT 60.119 43.478 17.86 6.43 0.00 3.85
119 120 3.829886 TCAAAATGCATCGTTGTCCTC 57.170 42.857 17.86 0.00 0.00 3.71
120 121 3.411446 TCAAAATGCATCGTTGTCCTCT 58.589 40.909 17.86 0.00 0.00 3.69
121 122 3.189080 TCAAAATGCATCGTTGTCCTCTG 59.811 43.478 17.86 0.00 0.00 3.35
122 123 2.768253 AATGCATCGTTGTCCTCTGA 57.232 45.000 0.00 0.00 0.00 3.27
123 124 2.996249 ATGCATCGTTGTCCTCTGAT 57.004 45.000 0.00 0.00 0.00 2.90
124 125 4.406648 AATGCATCGTTGTCCTCTGATA 57.593 40.909 0.00 0.00 0.00 2.15
125 126 3.443099 TGCATCGTTGTCCTCTGATAG 57.557 47.619 0.00 0.00 0.00 2.08
127 128 2.546795 GCATCGTTGTCCTCTGATAGGG 60.547 54.545 0.00 0.00 46.55 3.53
128 129 1.776662 TCGTTGTCCTCTGATAGGGG 58.223 55.000 0.00 0.00 46.55 4.79
129 130 1.286849 TCGTTGTCCTCTGATAGGGGA 59.713 52.381 0.00 0.00 46.55 4.81
130 131 1.683917 CGTTGTCCTCTGATAGGGGAG 59.316 57.143 0.00 0.00 46.55 4.30
131 132 2.043227 GTTGTCCTCTGATAGGGGAGG 58.957 57.143 0.00 0.00 46.55 4.30
132 133 0.563173 TGTCCTCTGATAGGGGAGGG 59.437 60.000 0.00 0.00 46.55 4.30
133 134 0.563672 GTCCTCTGATAGGGGAGGGT 59.436 60.000 0.00 0.00 46.55 4.34
134 135 0.861155 TCCTCTGATAGGGGAGGGTC 59.139 60.000 8.82 0.00 46.55 4.46
135 136 0.178918 CCTCTGATAGGGGAGGGTCC 60.179 65.000 0.00 0.00 43.78 4.46
136 137 0.863956 CTCTGATAGGGGAGGGTCCT 59.136 60.000 0.00 0.00 36.57 3.85
137 138 1.221781 CTCTGATAGGGGAGGGTCCTT 59.778 57.143 0.00 0.00 36.57 3.36
138 139 2.451273 CTCTGATAGGGGAGGGTCCTTA 59.549 54.545 0.00 0.00 36.57 2.69
139 140 2.451273 TCTGATAGGGGAGGGTCCTTAG 59.549 54.545 0.00 0.00 36.57 2.18
140 141 2.451273 CTGATAGGGGAGGGTCCTTAGA 59.549 54.545 0.00 0.00 36.57 2.10
141 142 2.451273 TGATAGGGGAGGGTCCTTAGAG 59.549 54.545 0.00 0.00 36.57 2.43
142 143 2.315503 TAGGGGAGGGTCCTTAGAGA 57.684 55.000 0.00 0.00 36.57 3.10
143 144 1.638959 AGGGGAGGGTCCTTAGAGAT 58.361 55.000 0.00 0.00 36.57 2.75
144 145 1.505977 AGGGGAGGGTCCTTAGAGATC 59.494 57.143 0.00 0.00 36.57 2.75
145 146 1.505977 GGGGAGGGTCCTTAGAGATCT 59.494 57.143 0.00 0.00 36.57 2.75
146 147 2.604139 GGGAGGGTCCTTAGAGATCTG 58.396 57.143 0.00 0.00 36.57 2.90
147 148 1.967779 GGAGGGTCCTTAGAGATCTGC 59.032 57.143 0.00 0.00 32.53 4.26
148 149 1.967779 GAGGGTCCTTAGAGATCTGCC 59.032 57.143 0.00 0.00 0.00 4.85
149 150 1.292242 AGGGTCCTTAGAGATCTGCCA 59.708 52.381 0.00 0.00 0.00 4.92
150 151 2.090267 AGGGTCCTTAGAGATCTGCCAT 60.090 50.000 0.00 0.00 0.00 4.40
151 152 3.142977 AGGGTCCTTAGAGATCTGCCATA 59.857 47.826 0.00 0.00 0.00 2.74
152 153 3.513515 GGGTCCTTAGAGATCTGCCATAG 59.486 52.174 0.00 0.00 0.00 2.23
153 154 4.156477 GGTCCTTAGAGATCTGCCATAGT 58.844 47.826 0.00 0.00 0.00 2.12
154 155 4.591072 GGTCCTTAGAGATCTGCCATAGTT 59.409 45.833 0.00 0.00 0.00 2.24
155 156 5.510520 GGTCCTTAGAGATCTGCCATAGTTG 60.511 48.000 0.00 0.00 0.00 3.16
156 157 4.590647 TCCTTAGAGATCTGCCATAGTTGG 59.409 45.833 0.00 0.00 46.66 3.77
157 158 4.590647 CCTTAGAGATCTGCCATAGTTGGA 59.409 45.833 0.00 0.00 46.92 3.53
158 159 5.279406 CCTTAGAGATCTGCCATAGTTGGAG 60.279 48.000 0.00 0.00 46.92 3.86
159 160 3.921104 AGAGATCTGCCATAGTTGGAGA 58.079 45.455 0.00 0.00 46.92 3.71
160 161 4.491675 AGAGATCTGCCATAGTTGGAGAT 58.508 43.478 0.00 0.00 46.92 2.75
161 162 5.649265 AGAGATCTGCCATAGTTGGAGATA 58.351 41.667 0.00 0.00 46.92 1.98
162 163 6.262980 AGAGATCTGCCATAGTTGGAGATAT 58.737 40.000 0.00 0.00 46.92 1.63
163 164 6.730038 AGAGATCTGCCATAGTTGGAGATATT 59.270 38.462 0.00 0.00 46.92 1.28
164 165 6.945218 AGATCTGCCATAGTTGGAGATATTC 58.055 40.000 0.00 0.00 46.92 1.75
165 166 6.499699 AGATCTGCCATAGTTGGAGATATTCA 59.500 38.462 0.00 0.00 46.92 2.57
166 167 6.106648 TCTGCCATAGTTGGAGATATTCAG 57.893 41.667 0.00 0.00 46.92 3.02
167 168 4.645535 TGCCATAGTTGGAGATATTCAGC 58.354 43.478 0.00 0.00 46.92 4.26
168 169 4.349048 TGCCATAGTTGGAGATATTCAGCT 59.651 41.667 0.00 0.00 46.92 4.24
169 170 5.543790 TGCCATAGTTGGAGATATTCAGCTA 59.456 40.000 0.00 0.00 46.92 3.32
170 171 6.105333 GCCATAGTTGGAGATATTCAGCTAG 58.895 44.000 0.00 0.00 46.92 3.42
171 172 6.105333 CCATAGTTGGAGATATTCAGCTAGC 58.895 44.000 6.62 6.62 46.92 3.42
172 173 6.295518 CCATAGTTGGAGATATTCAGCTAGCA 60.296 42.308 18.83 0.00 46.92 3.49
173 174 5.822132 AGTTGGAGATATTCAGCTAGCAT 57.178 39.130 18.83 4.24 0.00 3.79
174 175 6.924913 AGTTGGAGATATTCAGCTAGCATA 57.075 37.500 18.83 6.60 0.00 3.14
175 176 7.493499 AGTTGGAGATATTCAGCTAGCATAT 57.507 36.000 18.83 11.41 0.00 1.78
176 177 7.329499 AGTTGGAGATATTCAGCTAGCATATG 58.671 38.462 18.83 6.82 0.00 1.78
177 178 5.668471 TGGAGATATTCAGCTAGCATATGC 58.332 41.667 20.36 20.36 42.49 3.14
178 179 5.188359 TGGAGATATTCAGCTAGCATATGCA 59.812 40.000 28.62 13.96 45.16 3.96
179 180 5.523188 GGAGATATTCAGCTAGCATATGCAC 59.477 44.000 28.62 17.28 45.16 4.57
180 181 6.046290 AGATATTCAGCTAGCATATGCACA 57.954 37.500 28.62 15.15 45.16 4.57
181 182 6.107343 AGATATTCAGCTAGCATATGCACAG 58.893 40.000 28.62 23.58 45.16 3.66
182 183 3.825143 TTCAGCTAGCATATGCACAGA 57.175 42.857 28.62 16.35 45.16 3.41
183 184 3.825143 TCAGCTAGCATATGCACAGAA 57.175 42.857 28.62 11.50 45.16 3.02
184 185 3.725490 TCAGCTAGCATATGCACAGAAG 58.275 45.455 28.62 18.38 45.16 2.85
185 186 2.806818 CAGCTAGCATATGCACAGAAGG 59.193 50.000 28.62 13.42 45.16 3.46
186 187 2.149578 GCTAGCATATGCACAGAAGGG 58.850 52.381 28.62 10.26 45.16 3.95
187 188 2.775890 CTAGCATATGCACAGAAGGGG 58.224 52.381 28.62 4.81 45.16 4.79
188 189 0.921896 AGCATATGCACAGAAGGGGT 59.078 50.000 28.62 1.58 45.16 4.95
189 190 2.126882 AGCATATGCACAGAAGGGGTA 58.873 47.619 28.62 0.00 45.16 3.69
190 191 2.158755 AGCATATGCACAGAAGGGGTAC 60.159 50.000 28.62 0.00 45.16 3.34
191 192 2.421388 GCATATGCACAGAAGGGGTACA 60.421 50.000 22.84 0.00 41.59 2.90
192 193 3.206150 CATATGCACAGAAGGGGTACAC 58.794 50.000 0.00 0.00 0.00 2.90
193 194 1.064003 ATGCACAGAAGGGGTACACA 58.936 50.000 0.00 0.00 0.00 3.72
194 195 0.396435 TGCACAGAAGGGGTACACAG 59.604 55.000 0.00 0.00 0.00 3.66
195 196 0.685097 GCACAGAAGGGGTACACAGA 59.315 55.000 0.00 0.00 0.00 3.41
196 197 1.338200 GCACAGAAGGGGTACACAGAG 60.338 57.143 0.00 0.00 0.00 3.35
197 198 1.276421 CACAGAAGGGGTACACAGAGG 59.724 57.143 0.00 0.00 0.00 3.69
198 199 1.132817 ACAGAAGGGGTACACAGAGGT 60.133 52.381 0.00 0.00 0.00 3.85
199 200 1.550976 CAGAAGGGGTACACAGAGGTC 59.449 57.143 0.00 0.00 0.00 3.85
200 201 0.903236 GAAGGGGTACACAGAGGTCC 59.097 60.000 0.00 0.00 0.00 4.46
201 202 0.903454 AAGGGGTACACAGAGGTCCG 60.903 60.000 0.00 0.00 0.00 4.79
202 203 1.304713 GGGGTACACAGAGGTCCGA 60.305 63.158 0.00 0.00 0.00 4.55
203 204 0.901580 GGGGTACACAGAGGTCCGAA 60.902 60.000 0.00 0.00 0.00 4.30
204 205 0.971386 GGGTACACAGAGGTCCGAAA 59.029 55.000 0.00 0.00 0.00 3.46
205 206 1.553704 GGGTACACAGAGGTCCGAAAT 59.446 52.381 0.00 0.00 0.00 2.17
206 207 2.418334 GGGTACACAGAGGTCCGAAATC 60.418 54.545 0.00 0.00 0.00 2.17
207 208 2.418334 GGTACACAGAGGTCCGAAATCC 60.418 54.545 0.00 0.00 0.00 3.01
208 209 1.348064 ACACAGAGGTCCGAAATCCA 58.652 50.000 0.00 0.00 0.00 3.41
209 210 1.909302 ACACAGAGGTCCGAAATCCAT 59.091 47.619 0.00 0.00 0.00 3.41
210 211 2.283298 CACAGAGGTCCGAAATCCATG 58.717 52.381 0.00 0.00 0.00 3.66
211 212 1.909302 ACAGAGGTCCGAAATCCATGT 59.091 47.619 0.00 0.00 0.00 3.21
212 213 2.283298 CAGAGGTCCGAAATCCATGTG 58.717 52.381 0.00 0.00 0.00 3.21
213 214 1.909302 AGAGGTCCGAAATCCATGTGT 59.091 47.619 0.00 0.00 0.00 3.72
214 215 2.305927 AGAGGTCCGAAATCCATGTGTT 59.694 45.455 0.00 0.00 0.00 3.32
215 216 3.517901 AGAGGTCCGAAATCCATGTGTTA 59.482 43.478 0.00 0.00 0.00 2.41
216 217 4.164221 AGAGGTCCGAAATCCATGTGTTAT 59.836 41.667 0.00 0.00 0.00 1.89
217 218 5.365605 AGAGGTCCGAAATCCATGTGTTATA 59.634 40.000 0.00 0.00 0.00 0.98
218 219 5.996644 AGGTCCGAAATCCATGTGTTATAA 58.003 37.500 0.00 0.00 0.00 0.98
219 220 6.601332 AGGTCCGAAATCCATGTGTTATAAT 58.399 36.000 0.00 0.00 0.00 1.28
220 221 6.486657 AGGTCCGAAATCCATGTGTTATAATG 59.513 38.462 0.00 0.00 0.00 1.90
221 222 6.293955 GGTCCGAAATCCATGTGTTATAATGG 60.294 42.308 0.00 0.00 44.06 3.16
222 223 5.240623 TCCGAAATCCATGTGTTATAATGGC 59.759 40.000 0.00 0.00 42.67 4.40
223 224 5.009510 CCGAAATCCATGTGTTATAATGGCA 59.990 40.000 0.00 0.00 42.67 4.92
224 225 6.460814 CCGAAATCCATGTGTTATAATGGCAA 60.461 38.462 0.00 0.00 42.67 4.52
225 226 6.638063 CGAAATCCATGTGTTATAATGGCAAG 59.362 38.462 0.00 0.00 42.67 4.01
226 227 4.916983 TCCATGTGTTATAATGGCAAGC 57.083 40.909 0.00 0.00 42.67 4.01
227 228 3.636300 TCCATGTGTTATAATGGCAAGCC 59.364 43.478 3.61 3.61 42.67 4.35
228 229 3.638160 CCATGTGTTATAATGGCAAGCCT 59.362 43.478 12.96 0.00 37.15 4.58
229 230 4.261741 CCATGTGTTATAATGGCAAGCCTC 60.262 45.833 12.96 0.00 37.15 4.70
230 231 3.287222 TGTGTTATAATGGCAAGCCTCC 58.713 45.455 12.96 0.00 36.94 4.30
231 232 2.290641 GTGTTATAATGGCAAGCCTCCG 59.709 50.000 12.96 0.00 36.94 4.63
232 233 1.266989 GTTATAATGGCAAGCCTCCGC 59.733 52.381 12.96 0.00 36.94 5.54
239 240 4.473520 CAAGCCTCCGCCACCGAT 62.474 66.667 0.00 0.00 36.29 4.18
240 241 4.162690 AAGCCTCCGCCACCGATC 62.163 66.667 0.00 0.00 36.29 3.69
243 244 4.271816 CCTCCGCCACCGATCGAG 62.272 72.222 18.66 9.42 36.29 4.04
244 245 3.209812 CTCCGCCACCGATCGAGA 61.210 66.667 18.66 2.46 36.29 4.04
245 246 2.518587 TCCGCCACCGATCGAGAT 60.519 61.111 18.66 0.00 36.29 2.75
246 247 2.076622 CTCCGCCACCGATCGAGATT 62.077 60.000 18.66 0.00 36.29 2.40
247 248 1.227263 CCGCCACCGATCGAGATTT 60.227 57.895 18.66 0.00 36.29 2.17
248 249 1.490693 CCGCCACCGATCGAGATTTG 61.491 60.000 18.66 0.27 36.29 2.32
249 250 1.490693 CGCCACCGATCGAGATTTGG 61.491 60.000 18.66 14.72 36.29 3.28
250 251 1.776034 GCCACCGATCGAGATTTGGC 61.776 60.000 18.66 20.05 42.57 4.52
251 252 0.461870 CCACCGATCGAGATTTGGCA 60.462 55.000 18.66 0.00 0.00 4.92
252 253 0.652592 CACCGATCGAGATTTGGCAC 59.347 55.000 18.66 0.00 0.00 5.01
253 254 0.462047 ACCGATCGAGATTTGGCACC 60.462 55.000 18.66 0.00 0.00 5.01
254 255 1.160329 CCGATCGAGATTTGGCACCC 61.160 60.000 18.66 0.00 0.00 4.61
255 256 1.490693 CGATCGAGATTTGGCACCCG 61.491 60.000 10.26 0.00 0.00 5.28
256 257 1.776034 GATCGAGATTTGGCACCCGC 61.776 60.000 0.00 0.00 37.44 6.13
257 258 2.257409 ATCGAGATTTGGCACCCGCT 62.257 55.000 0.00 0.00 38.60 5.52
258 259 2.753966 CGAGATTTGGCACCCGCTG 61.754 63.158 0.00 0.00 38.60 5.18
259 260 2.361610 AGATTTGGCACCCGCTGG 60.362 61.111 0.00 0.00 38.60 4.85
260 261 2.361104 GATTTGGCACCCGCTGGA 60.361 61.111 0.00 0.00 38.60 3.86
261 262 1.976474 GATTTGGCACCCGCTGGAA 60.976 57.895 0.00 0.00 38.60 3.53
262 263 1.531739 GATTTGGCACCCGCTGGAAA 61.532 55.000 0.00 0.00 38.60 3.13
263 264 1.118356 ATTTGGCACCCGCTGGAAAA 61.118 50.000 0.00 0.00 38.60 2.29
264 265 1.743321 TTTGGCACCCGCTGGAAAAG 61.743 55.000 0.00 0.00 38.60 2.27
275 276 3.070429 GCTGGAAAAGCGGATGTTATG 57.930 47.619 0.00 0.00 43.45 1.90
276 277 2.423538 GCTGGAAAAGCGGATGTTATGT 59.576 45.455 0.00 0.00 43.45 2.29
277 278 3.731867 GCTGGAAAAGCGGATGTTATGTG 60.732 47.826 0.00 0.00 43.45 3.21
278 279 3.417101 TGGAAAAGCGGATGTTATGTGT 58.583 40.909 0.00 0.00 0.00 3.72
279 280 3.823873 TGGAAAAGCGGATGTTATGTGTT 59.176 39.130 0.00 0.00 0.00 3.32
280 281 4.165779 GGAAAAGCGGATGTTATGTGTTG 58.834 43.478 0.00 0.00 0.00 3.33
281 282 4.320935 GGAAAAGCGGATGTTATGTGTTGT 60.321 41.667 0.00 0.00 0.00 3.32
282 283 3.829886 AAGCGGATGTTATGTGTTGTG 57.170 42.857 0.00 0.00 0.00 3.33
283 284 2.778299 AGCGGATGTTATGTGTTGTGT 58.222 42.857 0.00 0.00 0.00 3.72
284 285 3.146066 AGCGGATGTTATGTGTTGTGTT 58.854 40.909 0.00 0.00 0.00 3.32
285 286 3.058293 AGCGGATGTTATGTGTTGTGTTG 60.058 43.478 0.00 0.00 0.00 3.33
286 287 3.304391 GCGGATGTTATGTGTTGTGTTGT 60.304 43.478 0.00 0.00 0.00 3.32
287 288 4.083749 GCGGATGTTATGTGTTGTGTTGTA 60.084 41.667 0.00 0.00 0.00 2.41
288 289 5.379003 CGGATGTTATGTGTTGTGTTGTAC 58.621 41.667 0.00 0.00 0.00 2.90
289 290 5.178623 CGGATGTTATGTGTTGTGTTGTACT 59.821 40.000 0.00 0.00 0.00 2.73
290 291 6.599437 GGATGTTATGTGTTGTGTTGTACTC 58.401 40.000 0.00 0.00 0.00 2.59
291 292 5.994887 TGTTATGTGTTGTGTTGTACTCC 57.005 39.130 0.00 0.00 0.00 3.85
292 293 4.817464 TGTTATGTGTTGTGTTGTACTCCC 59.183 41.667 0.00 0.00 0.00 4.30
293 294 3.857157 ATGTGTTGTGTTGTACTCCCT 57.143 42.857 0.00 0.00 0.00 4.20
294 295 3.188159 TGTGTTGTGTTGTACTCCCTC 57.812 47.619 0.00 0.00 0.00 4.30
295 296 2.158871 TGTGTTGTGTTGTACTCCCTCC 60.159 50.000 0.00 0.00 0.00 4.30
296 297 2.104281 GTGTTGTGTTGTACTCCCTCCT 59.896 50.000 0.00 0.00 0.00 3.69
297 298 2.775384 TGTTGTGTTGTACTCCCTCCTT 59.225 45.455 0.00 0.00 0.00 3.36
298 299 3.201266 TGTTGTGTTGTACTCCCTCCTTT 59.799 43.478 0.00 0.00 0.00 3.11
299 300 4.204799 GTTGTGTTGTACTCCCTCCTTTT 58.795 43.478 0.00 0.00 0.00 2.27
300 301 4.513406 TGTGTTGTACTCCCTCCTTTTT 57.487 40.909 0.00 0.00 0.00 1.94
301 302 5.633655 TGTGTTGTACTCCCTCCTTTTTA 57.366 39.130 0.00 0.00 0.00 1.52
302 303 6.195600 TGTGTTGTACTCCCTCCTTTTTAT 57.804 37.500 0.00 0.00 0.00 1.40
303 304 7.319052 TGTGTTGTACTCCCTCCTTTTTATA 57.681 36.000 0.00 0.00 0.00 0.98
304 305 7.747690 TGTGTTGTACTCCCTCCTTTTTATAA 58.252 34.615 0.00 0.00 0.00 0.98
305 306 8.387813 TGTGTTGTACTCCCTCCTTTTTATAAT 58.612 33.333 0.00 0.00 0.00 1.28
306 307 8.674607 GTGTTGTACTCCCTCCTTTTTATAATG 58.325 37.037 0.00 0.00 0.00 1.90
307 308 8.387813 TGTTGTACTCCCTCCTTTTTATAATGT 58.612 33.333 0.00 0.00 0.00 2.71
308 309 9.895138 GTTGTACTCCCTCCTTTTTATAATGTA 57.105 33.333 0.00 0.00 0.00 2.29
310 311 9.275572 TGTACTCCCTCCTTTTTATAATGTAGT 57.724 33.333 0.00 0.00 0.00 2.73
311 312 9.543783 GTACTCCCTCCTTTTTATAATGTAGTG 57.456 37.037 0.00 0.00 0.00 2.74
312 313 7.054751 ACTCCCTCCTTTTTATAATGTAGTGC 58.945 38.462 0.00 0.00 0.00 4.40
313 314 6.053005 TCCCTCCTTTTTATAATGTAGTGCG 58.947 40.000 0.00 0.00 0.00 5.34
314 315 5.820947 CCCTCCTTTTTATAATGTAGTGCGT 59.179 40.000 0.00 0.00 0.00 5.24
315 316 6.987992 CCCTCCTTTTTATAATGTAGTGCGTA 59.012 38.462 0.00 0.00 0.00 4.42
316 317 7.660208 CCCTCCTTTTTATAATGTAGTGCGTAT 59.340 37.037 0.00 0.00 0.00 3.06
317 318 9.701098 CCTCCTTTTTATAATGTAGTGCGTATA 57.299 33.333 0.00 0.00 0.00 1.47
433 434 7.496529 AACGAATCCTATGATATGTGTTTGG 57.503 36.000 0.00 0.00 0.00 3.28
434 435 5.470098 ACGAATCCTATGATATGTGTTTGGC 59.530 40.000 0.00 0.00 0.00 4.52
435 436 5.469760 CGAATCCTATGATATGTGTTTGGCA 59.530 40.000 0.00 0.00 0.00 4.92
436 437 6.149973 CGAATCCTATGATATGTGTTTGGCAT 59.850 38.462 0.00 0.00 0.00 4.40
437 438 7.308770 CGAATCCTATGATATGTGTTTGGCATT 60.309 37.037 0.00 0.00 0.00 3.56
438 439 6.882610 TCCTATGATATGTGTTTGGCATTC 57.117 37.500 0.00 0.00 0.00 2.67
439 440 6.604171 TCCTATGATATGTGTTTGGCATTCT 58.396 36.000 0.00 0.00 0.00 2.40
440 441 7.744733 TCCTATGATATGTGTTTGGCATTCTA 58.255 34.615 0.00 0.00 0.00 2.10
441 442 8.217111 TCCTATGATATGTGTTTGGCATTCTAA 58.783 33.333 0.00 0.00 0.00 2.10
442 443 8.849168 CCTATGATATGTGTTTGGCATTCTAAA 58.151 33.333 0.00 0.00 0.00 1.85
445 446 8.065473 TGATATGTGTTTGGCATTCTAAATGT 57.935 30.769 0.00 0.00 0.00 2.71
446 447 9.183368 TGATATGTGTTTGGCATTCTAAATGTA 57.817 29.630 0.00 0.00 0.00 2.29
450 451 9.723601 ATGTGTTTGGCATTCTAAATGTATTTT 57.276 25.926 0.00 0.00 0.00 1.82
451 452 9.553064 TGTGTTTGGCATTCTAAATGTATTTTT 57.447 25.926 0.00 0.00 0.00 1.94
492 493 6.972328 GTCAAAGTTTGTGATGCTTGACTTTA 59.028 34.615 15.08 0.00 36.06 1.85
494 495 8.031864 TCAAAGTTTGTGATGCTTGACTTTAAA 58.968 29.630 15.08 0.00 36.06 1.52
602 605 5.816919 TGGACGTCACAAGAAAGATTTTTC 58.183 37.500 18.91 0.46 42.44 2.29
664 667 3.402681 CATCCCCCACGTGCCTCT 61.403 66.667 10.91 0.00 0.00 3.69
666 669 3.924013 ATCCCCCACGTGCCTCTGA 62.924 63.158 10.91 1.98 0.00 3.27
667 670 4.394712 CCCCCACGTGCCTCTGAC 62.395 72.222 10.91 0.00 0.00 3.51
668 671 3.314331 CCCCACGTGCCTCTGACT 61.314 66.667 10.91 0.00 0.00 3.41
669 672 2.047844 CCCACGTGCCTCTGACTG 60.048 66.667 10.91 0.00 0.00 3.51
670 673 2.737180 CCACGTGCCTCTGACTGT 59.263 61.111 10.91 0.00 0.00 3.55
671 674 1.532604 CCCACGTGCCTCTGACTGTA 61.533 60.000 10.91 0.00 0.00 2.74
672 675 0.109086 CCACGTGCCTCTGACTGTAG 60.109 60.000 10.91 0.00 0.00 2.74
673 676 0.734253 CACGTGCCTCTGACTGTAGC 60.734 60.000 0.82 0.00 0.00 3.58
674 677 1.179174 ACGTGCCTCTGACTGTAGCA 61.179 55.000 0.00 0.00 0.00 3.49
675 678 0.174389 CGTGCCTCTGACTGTAGCAT 59.826 55.000 0.00 0.00 35.62 3.79
676 679 1.404717 CGTGCCTCTGACTGTAGCATT 60.405 52.381 0.00 0.00 35.62 3.56
677 680 2.704572 GTGCCTCTGACTGTAGCATTT 58.295 47.619 0.00 0.00 35.62 2.32
678 681 3.077359 GTGCCTCTGACTGTAGCATTTT 58.923 45.455 0.00 0.00 35.62 1.82
679 682 3.503748 GTGCCTCTGACTGTAGCATTTTT 59.496 43.478 0.00 0.00 35.62 1.94
680 683 3.753272 TGCCTCTGACTGTAGCATTTTTC 59.247 43.478 0.00 0.00 0.00 2.29
681 684 3.753272 GCCTCTGACTGTAGCATTTTTCA 59.247 43.478 0.00 0.00 0.00 2.69
682 685 4.397417 GCCTCTGACTGTAGCATTTTTCAT 59.603 41.667 0.00 0.00 0.00 2.57
683 686 5.675575 GCCTCTGACTGTAGCATTTTTCATG 60.676 44.000 0.00 0.00 0.00 3.07
684 687 5.300969 TCTGACTGTAGCATTTTTCATGC 57.699 39.130 0.00 0.00 44.85 4.06
685 688 4.761227 TCTGACTGTAGCATTTTTCATGCA 59.239 37.500 9.39 0.00 46.77 3.96
686 689 4.797471 TGACTGTAGCATTTTTCATGCAC 58.203 39.130 9.39 6.14 46.77 4.57
687 690 4.277921 TGACTGTAGCATTTTTCATGCACA 59.722 37.500 9.39 9.71 46.77 4.57
688 691 4.549458 ACTGTAGCATTTTTCATGCACAC 58.451 39.130 9.39 7.01 46.77 3.82
689 692 4.037803 ACTGTAGCATTTTTCATGCACACA 59.962 37.500 9.39 10.62 46.77 3.72
690 693 5.136816 TGTAGCATTTTTCATGCACACAT 57.863 34.783 9.39 0.00 46.77 3.21
691 694 5.162794 TGTAGCATTTTTCATGCACACATC 58.837 37.500 9.39 0.00 46.77 3.06
692 695 4.260139 AGCATTTTTCATGCACACATCA 57.740 36.364 9.39 0.00 46.77 3.07
693 696 4.242475 AGCATTTTTCATGCACACATCAG 58.758 39.130 9.39 0.00 46.77 2.90
694 697 3.991773 GCATTTTTCATGCACACATCAGT 59.008 39.130 1.87 0.00 44.00 3.41
710 713 4.156556 ACATCAGTGTATGCATTTGTGTCC 59.843 41.667 3.54 0.00 36.63 4.02
747 750 2.940158 CCATGCATCAGGAATTCAGGA 58.060 47.619 7.93 4.27 0.00 3.86
759 762 3.633525 GGAATTCAGGATGCATGCTTGTA 59.366 43.478 19.19 7.04 34.76 2.41
765 768 3.558829 CAGGATGCATGCTTGTAGTAGTG 59.441 47.826 19.19 0.74 0.00 2.74
795 798 5.122519 GTTGAGATCTTTTCCTGAGATCCC 58.877 45.833 9.76 0.57 46.88 3.85
808 811 7.321717 TCCTGAGATCCCCTAAATAATCAAG 57.678 40.000 0.00 0.00 0.00 3.02
814 817 7.616313 AGATCCCCTAAATAATCAAGTCGATC 58.384 38.462 0.00 0.00 31.11 3.69
817 820 4.929808 CCCTAAATAATCAAGTCGATCGGG 59.070 45.833 16.41 2.77 31.11 5.14
892 895 2.358322 ATAAATAGCCACCCGGTTGG 57.642 50.000 14.91 14.91 39.98 3.77
905 908 0.390472 CGGTTGGTCTTGGAGCTCTC 60.390 60.000 14.64 4.40 0.00 3.20
906 909 0.687354 GGTTGGTCTTGGAGCTCTCA 59.313 55.000 14.64 7.25 0.00 3.27
907 910 1.609320 GGTTGGTCTTGGAGCTCTCAC 60.609 57.143 14.64 5.12 0.00 3.51
908 911 0.318441 TTGGTCTTGGAGCTCTCACG 59.682 55.000 14.64 7.91 0.00 4.35
936 939 1.434773 CCTCCCTCCATCCCTCTCATA 59.565 57.143 0.00 0.00 0.00 2.15
937 940 2.045605 CCTCCCTCCATCCCTCTCATAT 59.954 54.545 0.00 0.00 0.00 1.78
938 941 3.273351 CCTCCCTCCATCCCTCTCATATA 59.727 52.174 0.00 0.00 0.00 0.86
939 942 4.078101 CCTCCCTCCATCCCTCTCATATAT 60.078 50.000 0.00 0.00 0.00 0.86
942 945 5.035556 CCCTCCATCCCTCTCATATATTGT 58.964 45.833 0.00 0.00 0.00 2.71
953 956 6.025749 TCTCATATATTGTCCTTAGCCACG 57.974 41.667 0.00 0.00 0.00 4.94
972 975 2.280389 ACAGCACCAGAGCACGTG 60.280 61.111 12.28 12.28 36.85 4.49
1080 1096 0.755698 TCCCTAAGAAGGCGCTCGAT 60.756 55.000 7.64 0.00 42.14 3.59
1211 1227 1.985895 CTCACCACTCCCTTTAACCCT 59.014 52.381 0.00 0.00 0.00 4.34
1223 1239 1.497309 TTAACCCTCCCCACAGCCAG 61.497 60.000 0.00 0.00 0.00 4.85
1424 1936 3.056328 GGCAAACCTGGAGCCGTC 61.056 66.667 0.00 0.00 38.86 4.79
1454 1969 1.825281 AAGAAGAGCCTGCTGAGCGT 61.825 55.000 0.00 0.00 34.64 5.07
1504 2022 1.352352 CCTTCAACTGGTCCATGGAGT 59.648 52.381 16.81 7.04 0.00 3.85
1623 2141 1.081376 CGTCTTCGTCGCCAACTCT 60.081 57.895 0.00 0.00 0.00 3.24
1662 2180 1.167851 AGTACAGCTACAACCGCGTA 58.832 50.000 4.92 0.00 0.00 4.42
1695 2213 2.299993 ACGTGAGTACTCCATGCATG 57.700 50.000 20.19 20.19 46.88 4.06
1697 2215 1.740043 CGTGAGTACTCCATGCATGCA 60.740 52.381 25.04 25.04 0.00 3.96
1967 2570 3.706373 TCCTCGGTGGCTCCAAGC 61.706 66.667 6.39 0.00 41.46 4.01
2317 2952 3.516615 GTGACATCCTCAAGCTCTACAC 58.483 50.000 0.00 0.00 0.00 2.90
2429 3070 1.843376 CCCCATGGCCCTAGACGAT 60.843 63.158 6.09 0.00 0.00 3.73
2557 6591 9.883142 ACTCGTTATTACTACTCAAGTACTAGT 57.117 33.333 0.00 0.00 40.48 2.57
2776 6821 2.374170 CAGTCCATCCATCCATCCATGA 59.626 50.000 0.00 0.00 0.00 3.07
2777 6822 3.010250 CAGTCCATCCATCCATCCATGAT 59.990 47.826 0.00 0.00 0.00 2.45
2778 6823 3.266254 AGTCCATCCATCCATCCATGATC 59.734 47.826 0.00 0.00 0.00 2.92
2779 6824 2.579400 TCCATCCATCCATCCATGATCC 59.421 50.000 0.00 0.00 0.00 3.36
2780 6825 2.310647 CCATCCATCCATCCATGATCCA 59.689 50.000 0.00 0.00 0.00 3.41
2784 6829 4.702196 TCCATCCATCCATGATCCATCTA 58.298 43.478 0.00 0.00 0.00 1.98
2785 6830 5.294473 TCCATCCATCCATGATCCATCTAT 58.706 41.667 0.00 0.00 0.00 1.98
3641 7903 2.815211 GTGCGGCTGCTGATCGAA 60.815 61.111 20.27 0.00 43.34 3.71
4405 8709 0.976641 CTAGTGTGGGAGTTCTGCCA 59.023 55.000 8.92 8.92 0.00 4.92
4524 8840 5.617609 TGCATCGTCGTTTAGAGAAAATTG 58.382 37.500 0.00 0.00 0.00 2.32
4679 9002 6.381420 TGGTCCAAGTTCAAGTTTTCCAAATA 59.619 34.615 0.00 0.00 0.00 1.40
4746 9069 7.602265 TGATATCATTTGACTGAAACTCGACAA 59.398 33.333 0.00 0.00 0.00 3.18
4755 9078 7.406553 TGACTGAAACTCGACAAAAACTAATG 58.593 34.615 0.00 0.00 0.00 1.90
4785 9109 8.250332 TGCTACAGACAAGAAAACAAAGAAAAT 58.750 29.630 0.00 0.00 0.00 1.82
4800 9124 6.367695 ACAAAGAAAATAAAACATAAGCCGGC 59.632 34.615 21.89 21.89 0.00 6.13
4833 9157 8.686334 ACATATGACATCAAACATTAAGTTCCC 58.314 33.333 10.38 0.00 40.26 3.97
4835 9159 7.781324 ATGACATCAAACATTAAGTTCCCTT 57.219 32.000 0.00 0.00 40.26 3.95
4843 9167 5.763876 ACATTAAGTTCCCTTAGTGAGCT 57.236 39.130 10.68 0.00 41.14 4.09
5039 9363 9.014297 CATTAAGAGGTTTATTCAGGTTGAAGT 57.986 33.333 0.00 0.00 40.05 3.01
5058 9382 6.548321 TGAAGTTTCTCTTTGGGGCTAAATA 58.452 36.000 0.00 0.00 36.40 1.40
5101 9425 1.471287 CTGTGTTGTCATGATGCCCAG 59.529 52.381 0.00 0.00 0.00 4.45
5103 9427 1.307355 TGTTGTCATGATGCCCAGCG 61.307 55.000 0.00 0.00 0.00 5.18
5149 9473 2.289444 GCGGGCATCTAAGGCTGTTATA 60.289 50.000 0.00 0.00 42.05 0.98
5194 9518 4.762251 GGTAACAGGAAGCAAGTGAGATTT 59.238 41.667 0.00 0.00 0.00 2.17
5196 9520 5.444663 AACAGGAAGCAAGTGAGATTTTC 57.555 39.130 0.00 0.00 0.00 2.29
5207 9531 6.672147 CAAGTGAGATTTTCGGAAGATGTTT 58.328 36.000 0.00 0.00 41.60 2.83
5212 9536 6.040391 TGAGATTTTCGGAAGATGTTTGGTTT 59.960 34.615 0.00 0.00 41.60 3.27
5316 9640 5.180271 GGATGGTTGTCAAATCAAATGCAT 58.820 37.500 0.00 0.00 27.92 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.146066 AGCGTGGTAAAAGCAATCTCAA 58.854 40.909 0.00 0.00 35.46 3.02
1 2 2.778299 AGCGTGGTAAAAGCAATCTCA 58.222 42.857 0.00 0.00 35.46 3.27
2 3 3.492313 CAAGCGTGGTAAAAGCAATCTC 58.508 45.455 0.00 0.00 35.46 2.75
3 4 2.351738 GCAAGCGTGGTAAAAGCAATCT 60.352 45.455 0.79 0.00 35.46 2.40
4 5 1.985684 GCAAGCGTGGTAAAAGCAATC 59.014 47.619 0.79 0.00 35.46 2.67
5 6 1.336795 GGCAAGCGTGGTAAAAGCAAT 60.337 47.619 0.79 0.00 35.46 3.56
6 7 0.031449 GGCAAGCGTGGTAAAAGCAA 59.969 50.000 0.79 0.00 35.46 3.91
7 8 1.657556 GGCAAGCGTGGTAAAAGCA 59.342 52.632 0.79 0.00 35.46 3.91
8 9 1.442017 CGGCAAGCGTGGTAAAAGC 60.442 57.895 0.79 0.00 0.00 3.51
9 10 1.442017 GCGGCAAGCGTGGTAAAAG 60.442 57.895 0.79 0.00 35.41 2.27
10 11 2.640421 GCGGCAAGCGTGGTAAAA 59.360 55.556 0.79 0.00 35.41 1.52
19 20 0.661020 AATATTACCACGCGGCAAGC 59.339 50.000 12.47 0.00 43.95 4.01
20 21 2.210116 AGAATATTACCACGCGGCAAG 58.790 47.619 12.47 0.00 34.57 4.01
21 22 2.319136 AGAATATTACCACGCGGCAA 57.681 45.000 12.47 0.00 34.57 4.52
22 23 2.319136 AAGAATATTACCACGCGGCA 57.681 45.000 12.47 0.00 34.57 5.69
23 24 3.311596 AGAAAAGAATATTACCACGCGGC 59.688 43.478 12.47 0.00 34.57 6.53
24 25 5.479716 AAGAAAAGAATATTACCACGCGG 57.520 39.130 12.47 0.00 38.77 6.46
25 26 8.173130 AGTAAAAGAAAAGAATATTACCACGCG 58.827 33.333 3.53 3.53 0.00 6.01
26 27 9.836076 AAGTAAAAGAAAAGAATATTACCACGC 57.164 29.630 0.00 0.00 0.00 5.34
33 34 9.010029 TCGAGCCAAGTAAAAGAAAAGAATATT 57.990 29.630 0.00 0.00 0.00 1.28
34 35 8.561738 TCGAGCCAAGTAAAAGAAAAGAATAT 57.438 30.769 0.00 0.00 0.00 1.28
35 36 7.972832 TCGAGCCAAGTAAAAGAAAAGAATA 57.027 32.000 0.00 0.00 0.00 1.75
36 37 6.877611 TCGAGCCAAGTAAAAGAAAAGAAT 57.122 33.333 0.00 0.00 0.00 2.40
37 38 6.668323 CATCGAGCCAAGTAAAAGAAAAGAA 58.332 36.000 0.00 0.00 0.00 2.52
38 39 5.334879 GCATCGAGCCAAGTAAAAGAAAAGA 60.335 40.000 0.00 0.00 37.23 2.52
39 40 4.853743 GCATCGAGCCAAGTAAAAGAAAAG 59.146 41.667 0.00 0.00 37.23 2.27
40 41 4.277174 TGCATCGAGCCAAGTAAAAGAAAA 59.723 37.500 0.00 0.00 44.83 2.29
41 42 3.818210 TGCATCGAGCCAAGTAAAAGAAA 59.182 39.130 0.00 0.00 44.83 2.52
42 43 3.407698 TGCATCGAGCCAAGTAAAAGAA 58.592 40.909 0.00 0.00 44.83 2.52
43 44 3.052455 TGCATCGAGCCAAGTAAAAGA 57.948 42.857 0.00 0.00 44.83 2.52
44 45 4.361451 AATGCATCGAGCCAAGTAAAAG 57.639 40.909 0.00 0.00 44.83 2.27
45 46 4.782019 AAATGCATCGAGCCAAGTAAAA 57.218 36.364 0.00 0.00 44.83 1.52
46 47 5.888691 TTAAATGCATCGAGCCAAGTAAA 57.111 34.783 0.00 0.00 44.83 2.01
47 48 5.588246 TGATTAAATGCATCGAGCCAAGTAA 59.412 36.000 0.00 0.00 44.83 2.24
48 49 5.122519 TGATTAAATGCATCGAGCCAAGTA 58.877 37.500 0.00 0.00 44.83 2.24
49 50 3.947196 TGATTAAATGCATCGAGCCAAGT 59.053 39.130 0.00 0.00 44.83 3.16
50 51 4.534168 CTGATTAAATGCATCGAGCCAAG 58.466 43.478 0.00 0.00 44.83 3.61
51 52 3.243168 GCTGATTAAATGCATCGAGCCAA 60.243 43.478 0.00 0.00 44.83 4.52
52 53 2.291465 GCTGATTAAATGCATCGAGCCA 59.709 45.455 0.00 0.00 44.83 4.75
53 54 2.551459 AGCTGATTAAATGCATCGAGCC 59.449 45.455 0.00 0.00 44.83 4.70
54 55 3.892918 AGCTGATTAAATGCATCGAGC 57.107 42.857 0.00 1.69 45.96 5.03
55 56 5.165911 ACAAGCTGATTAAATGCATCGAG 57.834 39.130 0.00 0.00 0.00 4.04
56 57 5.007626 GGTACAAGCTGATTAAATGCATCGA 59.992 40.000 0.00 0.00 0.00 3.59
57 58 5.207768 GGTACAAGCTGATTAAATGCATCG 58.792 41.667 0.00 0.00 0.00 3.84
58 59 6.135290 TGGTACAAGCTGATTAAATGCATC 57.865 37.500 0.00 0.00 31.92 3.91
68 69 7.894251 GACTTACGTCTAATGGTACAAGCTGAT 60.894 40.741 0.00 0.00 38.56 2.90
69 70 6.624423 GACTTACGTCTAATGGTACAAGCTGA 60.624 42.308 0.00 0.00 38.56 4.26
70 71 5.515626 GACTTACGTCTAATGGTACAAGCTG 59.484 44.000 0.00 0.00 38.56 4.24
71 72 5.648572 GACTTACGTCTAATGGTACAAGCT 58.351 41.667 0.00 0.00 38.56 3.74
72 73 4.498323 CGACTTACGTCTAATGGTACAAGC 59.502 45.833 0.00 0.00 39.18 4.01
73 74 4.498323 GCGACTTACGTCTAATGGTACAAG 59.502 45.833 0.00 0.00 43.66 3.16
74 75 4.414852 GCGACTTACGTCTAATGGTACAA 58.585 43.478 0.00 0.00 43.66 2.41
75 76 3.181497 GGCGACTTACGTCTAATGGTACA 60.181 47.826 0.00 0.00 43.75 2.90
76 77 3.366719 GGCGACTTACGTCTAATGGTAC 58.633 50.000 0.00 0.00 43.76 3.34
77 78 3.698029 GGCGACTTACGTCTAATGGTA 57.302 47.619 0.00 0.00 43.76 3.25
78 79 2.573941 GGCGACTTACGTCTAATGGT 57.426 50.000 0.00 0.00 43.76 3.55
86 87 2.159572 GCATTTTGATGGCGACTTACGT 60.160 45.455 0.00 0.00 44.60 3.57
87 88 2.159585 TGCATTTTGATGGCGACTTACG 60.160 45.455 0.00 0.00 45.66 3.18
88 89 3.485947 TGCATTTTGATGGCGACTTAC 57.514 42.857 0.00 0.00 0.00 2.34
89 90 3.242706 CGATGCATTTTGATGGCGACTTA 60.243 43.478 0.00 0.00 0.00 2.24
90 91 2.478370 CGATGCATTTTGATGGCGACTT 60.478 45.455 0.00 0.00 0.00 3.01
91 92 1.064505 CGATGCATTTTGATGGCGACT 59.935 47.619 0.00 0.00 0.00 4.18
92 93 1.202177 ACGATGCATTTTGATGGCGAC 60.202 47.619 0.00 0.00 0.00 5.19
93 94 1.093972 ACGATGCATTTTGATGGCGA 58.906 45.000 0.00 0.00 0.00 5.54
94 95 1.584761 CAACGATGCATTTTGATGGCG 59.415 47.619 14.04 7.25 0.00 5.69
95 96 2.599973 GACAACGATGCATTTTGATGGC 59.400 45.455 22.28 10.66 0.00 4.40
96 97 3.119388 AGGACAACGATGCATTTTGATGG 60.119 43.478 22.28 4.60 0.00 3.51
97 98 4.100529 GAGGACAACGATGCATTTTGATG 58.899 43.478 22.28 13.44 0.00 3.07
98 99 4.012374 AGAGGACAACGATGCATTTTGAT 58.988 39.130 22.28 11.48 0.00 2.57
99 100 3.189080 CAGAGGACAACGATGCATTTTGA 59.811 43.478 22.28 0.00 0.00 2.69
100 101 3.189080 TCAGAGGACAACGATGCATTTTG 59.811 43.478 16.52 16.52 0.00 2.44
101 102 3.411446 TCAGAGGACAACGATGCATTTT 58.589 40.909 0.00 0.00 0.00 1.82
102 103 3.057969 TCAGAGGACAACGATGCATTT 57.942 42.857 0.00 0.00 0.00 2.32
103 104 2.768253 TCAGAGGACAACGATGCATT 57.232 45.000 0.00 0.00 0.00 3.56
104 105 2.996249 ATCAGAGGACAACGATGCAT 57.004 45.000 0.00 0.00 0.00 3.96
105 106 3.443099 CTATCAGAGGACAACGATGCA 57.557 47.619 0.00 0.00 0.00 3.96
117 118 0.863956 AGGACCCTCCCCTATCAGAG 59.136 60.000 0.00 0.00 37.19 3.35
118 119 1.330155 AAGGACCCTCCCCTATCAGA 58.670 55.000 0.00 0.00 37.19 3.27
119 120 2.451273 TCTAAGGACCCTCCCCTATCAG 59.549 54.545 0.00 0.00 37.19 2.90
120 121 2.451273 CTCTAAGGACCCTCCCCTATCA 59.549 54.545 0.00 0.00 37.19 2.15
121 122 2.723010 TCTCTAAGGACCCTCCCCTATC 59.277 54.545 0.00 0.00 37.19 2.08
122 123 2.816113 TCTCTAAGGACCCTCCCCTAT 58.184 52.381 0.00 0.00 37.19 2.57
123 124 2.315503 TCTCTAAGGACCCTCCCCTA 57.684 55.000 0.00 0.00 37.19 3.53
124 125 1.505977 GATCTCTAAGGACCCTCCCCT 59.494 57.143 0.00 0.00 37.19 4.79
125 126 1.505977 AGATCTCTAAGGACCCTCCCC 59.494 57.143 0.00 0.00 37.19 4.81
126 127 2.604139 CAGATCTCTAAGGACCCTCCC 58.396 57.143 0.00 0.00 37.19 4.30
127 128 1.967779 GCAGATCTCTAAGGACCCTCC 59.032 57.143 0.00 0.00 36.58 4.30
128 129 1.967779 GGCAGATCTCTAAGGACCCTC 59.032 57.143 0.00 0.00 0.00 4.30
129 130 1.292242 TGGCAGATCTCTAAGGACCCT 59.708 52.381 0.00 0.00 0.00 4.34
130 131 1.794714 TGGCAGATCTCTAAGGACCC 58.205 55.000 0.00 0.00 0.00 4.46
131 132 4.156477 ACTATGGCAGATCTCTAAGGACC 58.844 47.826 0.00 0.00 0.00 4.46
132 133 5.510520 CCAACTATGGCAGATCTCTAAGGAC 60.511 48.000 0.00 0.00 40.58 3.85
133 134 4.590647 CCAACTATGGCAGATCTCTAAGGA 59.409 45.833 0.00 0.00 40.58 3.36
134 135 4.892433 CCAACTATGGCAGATCTCTAAGG 58.108 47.826 0.00 0.00 40.58 2.69
148 149 6.695429 TGCTAGCTGAATATCTCCAACTATG 58.305 40.000 17.23 0.00 0.00 2.23
149 150 6.924913 TGCTAGCTGAATATCTCCAACTAT 57.075 37.500 17.23 0.00 0.00 2.12
150 151 6.924913 ATGCTAGCTGAATATCTCCAACTA 57.075 37.500 17.23 0.00 0.00 2.24
151 152 5.822132 ATGCTAGCTGAATATCTCCAACT 57.178 39.130 17.23 0.00 0.00 3.16
152 153 6.036953 GCATATGCTAGCTGAATATCTCCAAC 59.963 42.308 20.64 0.00 38.21 3.77
153 154 6.111382 GCATATGCTAGCTGAATATCTCCAA 58.889 40.000 20.64 0.00 38.21 3.53
154 155 5.188359 TGCATATGCTAGCTGAATATCTCCA 59.812 40.000 27.13 5.43 42.66 3.86
155 156 5.523188 GTGCATATGCTAGCTGAATATCTCC 59.477 44.000 27.13 3.19 42.66 3.71
156 157 6.104665 TGTGCATATGCTAGCTGAATATCTC 58.895 40.000 27.13 5.98 42.66 2.75
157 158 6.046290 TGTGCATATGCTAGCTGAATATCT 57.954 37.500 27.13 0.00 42.66 1.98
158 159 6.104665 TCTGTGCATATGCTAGCTGAATATC 58.895 40.000 27.13 6.26 42.66 1.63
159 160 6.046290 TCTGTGCATATGCTAGCTGAATAT 57.954 37.500 27.13 8.18 42.66 1.28
160 161 5.473066 TCTGTGCATATGCTAGCTGAATA 57.527 39.130 27.13 5.99 42.66 1.75
161 162 4.347360 TCTGTGCATATGCTAGCTGAAT 57.653 40.909 27.13 3.62 42.66 2.57
162 163 3.825143 TCTGTGCATATGCTAGCTGAA 57.175 42.857 27.13 3.32 42.66 3.02
163 164 3.493873 CCTTCTGTGCATATGCTAGCTGA 60.494 47.826 27.13 20.69 42.66 4.26
164 165 2.806818 CCTTCTGTGCATATGCTAGCTG 59.193 50.000 27.13 19.10 42.66 4.24
165 166 2.224475 CCCTTCTGTGCATATGCTAGCT 60.224 50.000 27.13 4.07 42.66 3.32
166 167 2.149578 CCCTTCTGTGCATATGCTAGC 58.850 52.381 27.13 17.33 42.66 3.42
167 168 2.105477 ACCCCTTCTGTGCATATGCTAG 59.895 50.000 27.13 23.03 42.66 3.42
168 169 2.126882 ACCCCTTCTGTGCATATGCTA 58.873 47.619 27.13 15.59 42.66 3.49
169 170 0.921896 ACCCCTTCTGTGCATATGCT 59.078 50.000 27.13 1.01 42.66 3.79
170 171 2.222027 GTACCCCTTCTGTGCATATGC 58.778 52.381 21.09 21.09 42.50 3.14
171 172 3.206150 GTGTACCCCTTCTGTGCATATG 58.794 50.000 0.00 0.00 31.07 1.78
172 173 2.843730 TGTGTACCCCTTCTGTGCATAT 59.156 45.455 0.00 0.00 31.07 1.78
173 174 2.236146 CTGTGTACCCCTTCTGTGCATA 59.764 50.000 0.00 0.00 31.07 3.14
174 175 1.003580 CTGTGTACCCCTTCTGTGCAT 59.996 52.381 0.00 0.00 31.07 3.96
175 176 0.396435 CTGTGTACCCCTTCTGTGCA 59.604 55.000 0.00 0.00 0.00 4.57
176 177 0.685097 TCTGTGTACCCCTTCTGTGC 59.315 55.000 0.00 0.00 0.00 4.57
177 178 1.276421 CCTCTGTGTACCCCTTCTGTG 59.724 57.143 0.00 0.00 0.00 3.66
178 179 1.132817 ACCTCTGTGTACCCCTTCTGT 60.133 52.381 0.00 0.00 0.00 3.41
179 180 1.550976 GACCTCTGTGTACCCCTTCTG 59.449 57.143 0.00 0.00 0.00 3.02
180 181 1.552719 GGACCTCTGTGTACCCCTTCT 60.553 57.143 0.00 0.00 0.00 2.85
181 182 0.903236 GGACCTCTGTGTACCCCTTC 59.097 60.000 0.00 0.00 0.00 3.46
182 183 0.903454 CGGACCTCTGTGTACCCCTT 60.903 60.000 0.00 0.00 0.00 3.95
183 184 1.305046 CGGACCTCTGTGTACCCCT 60.305 63.158 0.00 0.00 0.00 4.79
184 185 0.901580 TTCGGACCTCTGTGTACCCC 60.902 60.000 0.00 0.00 0.00 4.95
185 186 0.971386 TTTCGGACCTCTGTGTACCC 59.029 55.000 0.00 0.00 0.00 3.69
186 187 2.418334 GGATTTCGGACCTCTGTGTACC 60.418 54.545 0.00 0.00 0.00 3.34
187 188 2.232941 TGGATTTCGGACCTCTGTGTAC 59.767 50.000 0.00 0.00 0.00 2.90
188 189 2.531771 TGGATTTCGGACCTCTGTGTA 58.468 47.619 0.00 0.00 0.00 2.90
189 190 1.348064 TGGATTTCGGACCTCTGTGT 58.652 50.000 0.00 0.00 0.00 3.72
190 191 2.283298 CATGGATTTCGGACCTCTGTG 58.717 52.381 0.00 0.00 0.00 3.66
191 192 1.909302 ACATGGATTTCGGACCTCTGT 59.091 47.619 0.00 0.00 0.00 3.41
192 193 2.283298 CACATGGATTTCGGACCTCTG 58.717 52.381 0.00 0.00 0.00 3.35
193 194 1.909302 ACACATGGATTTCGGACCTCT 59.091 47.619 0.00 0.00 0.00 3.69
194 195 2.403252 ACACATGGATTTCGGACCTC 57.597 50.000 0.00 0.00 0.00 3.85
195 196 2.879103 AACACATGGATTTCGGACCT 57.121 45.000 0.00 0.00 0.00 3.85
196 197 6.293955 CCATTATAACACATGGATTTCGGACC 60.294 42.308 0.00 0.00 42.49 4.46
197 198 6.668323 CCATTATAACACATGGATTTCGGAC 58.332 40.000 0.00 0.00 42.49 4.79
198 199 5.240623 GCCATTATAACACATGGATTTCGGA 59.759 40.000 6.96 0.00 42.49 4.55
199 200 5.009510 TGCCATTATAACACATGGATTTCGG 59.990 40.000 6.96 0.00 42.49 4.30
200 201 6.070897 TGCCATTATAACACATGGATTTCG 57.929 37.500 6.96 0.00 42.49 3.46
201 202 6.421801 GCTTGCCATTATAACACATGGATTTC 59.578 38.462 6.96 0.00 42.49 2.17
202 203 6.282930 GCTTGCCATTATAACACATGGATTT 58.717 36.000 6.96 0.00 42.49 2.17
203 204 5.221501 GGCTTGCCATTATAACACATGGATT 60.222 40.000 6.79 0.00 42.49 3.01
204 205 4.281688 GGCTTGCCATTATAACACATGGAT 59.718 41.667 6.79 0.00 42.49 3.41
205 206 3.636300 GGCTTGCCATTATAACACATGGA 59.364 43.478 6.79 0.00 42.49 3.41
206 207 3.638160 AGGCTTGCCATTATAACACATGG 59.362 43.478 14.54 0.00 42.73 3.66
207 208 4.261741 GGAGGCTTGCCATTATAACACATG 60.262 45.833 14.54 0.00 0.00 3.21
208 209 3.891366 GGAGGCTTGCCATTATAACACAT 59.109 43.478 14.54 0.00 0.00 3.21
209 210 3.287222 GGAGGCTTGCCATTATAACACA 58.713 45.455 14.54 0.00 0.00 3.72
210 211 2.290641 CGGAGGCTTGCCATTATAACAC 59.709 50.000 14.54 0.00 0.00 3.32
211 212 2.571212 CGGAGGCTTGCCATTATAACA 58.429 47.619 14.54 0.00 0.00 2.41
212 213 1.266989 GCGGAGGCTTGCCATTATAAC 59.733 52.381 14.54 0.00 35.83 1.89
213 214 1.604604 GCGGAGGCTTGCCATTATAA 58.395 50.000 14.54 0.00 35.83 0.98
214 215 3.322514 GCGGAGGCTTGCCATTATA 57.677 52.632 14.54 0.00 35.83 0.98
215 216 4.164258 GCGGAGGCTTGCCATTAT 57.836 55.556 14.54 0.00 35.83 1.28
226 227 4.271816 CTCGATCGGTGGCGGAGG 62.272 72.222 16.41 0.00 0.00 4.30
227 228 2.076622 AATCTCGATCGGTGGCGGAG 62.077 60.000 16.41 3.17 0.00 4.63
228 229 1.672854 AAATCTCGATCGGTGGCGGA 61.673 55.000 16.41 4.98 0.00 5.54
229 230 1.227263 AAATCTCGATCGGTGGCGG 60.227 57.895 16.41 0.00 0.00 6.13
230 231 1.490693 CCAAATCTCGATCGGTGGCG 61.491 60.000 16.41 0.00 0.00 5.69
231 232 1.776034 GCCAAATCTCGATCGGTGGC 61.776 60.000 22.32 22.32 44.23 5.01
232 233 0.461870 TGCCAAATCTCGATCGGTGG 60.462 55.000 16.41 15.10 0.00 4.61
233 234 0.652592 GTGCCAAATCTCGATCGGTG 59.347 55.000 16.41 8.93 0.00 4.94
234 235 0.462047 GGTGCCAAATCTCGATCGGT 60.462 55.000 16.41 0.00 0.00 4.69
235 236 1.160329 GGGTGCCAAATCTCGATCGG 61.160 60.000 16.41 6.26 0.00 4.18
236 237 1.490693 CGGGTGCCAAATCTCGATCG 61.491 60.000 9.36 9.36 0.00 3.69
237 238 1.776034 GCGGGTGCCAAATCTCGATC 61.776 60.000 0.00 0.00 33.98 3.69
238 239 1.819632 GCGGGTGCCAAATCTCGAT 60.820 57.895 0.00 0.00 33.98 3.59
239 240 2.435938 GCGGGTGCCAAATCTCGA 60.436 61.111 0.00 0.00 33.98 4.04
240 241 2.436646 AGCGGGTGCCAAATCTCG 60.437 61.111 0.00 0.00 44.31 4.04
241 242 2.409870 CCAGCGGGTGCCAAATCTC 61.410 63.158 0.70 0.00 44.31 2.75
242 243 2.361610 CCAGCGGGTGCCAAATCT 60.362 61.111 0.70 0.00 44.31 2.40
243 244 1.531739 TTTCCAGCGGGTGCCAAATC 61.532 55.000 1.81 0.00 44.31 2.17
244 245 1.118356 TTTTCCAGCGGGTGCCAAAT 61.118 50.000 1.81 0.00 44.31 2.32
245 246 1.743321 CTTTTCCAGCGGGTGCCAAA 61.743 55.000 1.81 0.35 44.31 3.28
246 247 2.123683 TTTTCCAGCGGGTGCCAA 60.124 55.556 1.81 0.00 44.31 4.52
247 248 2.597217 CTTTTCCAGCGGGTGCCA 60.597 61.111 1.81 0.00 44.31 4.92
248 249 4.056125 GCTTTTCCAGCGGGTGCC 62.056 66.667 1.81 0.00 44.31 5.01
255 256 2.423538 ACATAACATCCGCTTTTCCAGC 59.576 45.455 0.00 0.00 46.31 4.85
256 257 3.440173 ACACATAACATCCGCTTTTCCAG 59.560 43.478 0.00 0.00 0.00 3.86
257 258 3.417101 ACACATAACATCCGCTTTTCCA 58.583 40.909 0.00 0.00 0.00 3.53
258 259 4.165779 CAACACATAACATCCGCTTTTCC 58.834 43.478 0.00 0.00 0.00 3.13
259 260 4.616802 CACAACACATAACATCCGCTTTTC 59.383 41.667 0.00 0.00 0.00 2.29
260 261 4.037446 ACACAACACATAACATCCGCTTTT 59.963 37.500 0.00 0.00 0.00 2.27
261 262 3.568007 ACACAACACATAACATCCGCTTT 59.432 39.130 0.00 0.00 0.00 3.51
262 263 3.146066 ACACAACACATAACATCCGCTT 58.854 40.909 0.00 0.00 0.00 4.68
263 264 2.778299 ACACAACACATAACATCCGCT 58.222 42.857 0.00 0.00 0.00 5.52
264 265 3.233578 CAACACAACACATAACATCCGC 58.766 45.455 0.00 0.00 0.00 5.54
265 266 4.481930 ACAACACAACACATAACATCCG 57.518 40.909 0.00 0.00 0.00 4.18
266 267 6.348213 GGAGTACAACACAACACATAACATCC 60.348 42.308 0.00 0.00 0.00 3.51
267 268 6.348213 GGGAGTACAACACAACACATAACATC 60.348 42.308 0.00 0.00 0.00 3.06
268 269 5.472137 GGGAGTACAACACAACACATAACAT 59.528 40.000 0.00 0.00 0.00 2.71
269 270 4.817464 GGGAGTACAACACAACACATAACA 59.183 41.667 0.00 0.00 0.00 2.41
270 271 5.061179 AGGGAGTACAACACAACACATAAC 58.939 41.667 0.00 0.00 0.00 1.89
271 272 5.298989 AGGGAGTACAACACAACACATAA 57.701 39.130 0.00 0.00 0.00 1.90
272 273 4.262721 GGAGGGAGTACAACACAACACATA 60.263 45.833 0.00 0.00 0.00 2.29
273 274 3.496160 GGAGGGAGTACAACACAACACAT 60.496 47.826 0.00 0.00 0.00 3.21
274 275 2.158871 GGAGGGAGTACAACACAACACA 60.159 50.000 0.00 0.00 0.00 3.72
275 276 2.104281 AGGAGGGAGTACAACACAACAC 59.896 50.000 0.00 0.00 0.00 3.32
276 277 2.404559 AGGAGGGAGTACAACACAACA 58.595 47.619 0.00 0.00 0.00 3.33
277 278 3.487120 AAGGAGGGAGTACAACACAAC 57.513 47.619 0.00 0.00 0.00 3.32
278 279 4.513406 AAAAGGAGGGAGTACAACACAA 57.487 40.909 0.00 0.00 0.00 3.33
279 280 4.513406 AAAAAGGAGGGAGTACAACACA 57.487 40.909 0.00 0.00 0.00 3.72
280 281 8.674607 CATTATAAAAAGGAGGGAGTACAACAC 58.325 37.037 0.00 0.00 0.00 3.32
281 282 8.387813 ACATTATAAAAAGGAGGGAGTACAACA 58.612 33.333 0.00 0.00 0.00 3.33
282 283 8.803397 ACATTATAAAAAGGAGGGAGTACAAC 57.197 34.615 0.00 0.00 0.00 3.32
284 285 9.275572 ACTACATTATAAAAAGGAGGGAGTACA 57.724 33.333 0.00 0.00 0.00 2.90
285 286 9.543783 CACTACATTATAAAAAGGAGGGAGTAC 57.456 37.037 0.00 0.00 0.00 2.73
286 287 8.208903 GCACTACATTATAAAAAGGAGGGAGTA 58.791 37.037 2.54 0.00 0.00 2.59
287 288 7.054751 GCACTACATTATAAAAAGGAGGGAGT 58.945 38.462 2.54 0.00 0.00 3.85
288 289 6.202954 CGCACTACATTATAAAAAGGAGGGAG 59.797 42.308 2.54 0.00 0.00 4.30
289 290 6.053005 CGCACTACATTATAAAAAGGAGGGA 58.947 40.000 2.54 0.00 0.00 4.20
290 291 5.820947 ACGCACTACATTATAAAAAGGAGGG 59.179 40.000 0.00 0.00 0.00 4.30
291 292 6.920569 ACGCACTACATTATAAAAAGGAGG 57.079 37.500 0.00 0.00 0.00 4.30
407 408 9.051679 CCAAACACATATCATAGGATTCGTTAA 57.948 33.333 0.00 0.00 34.89 2.01
408 409 7.172532 GCCAAACACATATCATAGGATTCGTTA 59.827 37.037 0.00 0.00 34.89 3.18
409 410 6.017109 GCCAAACACATATCATAGGATTCGTT 60.017 38.462 0.00 0.00 34.89 3.85
410 411 5.470098 GCCAAACACATATCATAGGATTCGT 59.530 40.000 0.00 0.00 34.89 3.85
411 412 5.469760 TGCCAAACACATATCATAGGATTCG 59.530 40.000 0.00 0.00 34.89 3.34
412 413 6.882610 TGCCAAACACATATCATAGGATTC 57.117 37.500 0.00 0.00 34.89 2.52
413 414 7.727186 AGAATGCCAAACACATATCATAGGATT 59.273 33.333 0.00 0.00 34.89 3.01
414 415 7.236529 AGAATGCCAAACACATATCATAGGAT 58.763 34.615 0.00 0.00 37.55 3.24
415 416 6.604171 AGAATGCCAAACACATATCATAGGA 58.396 36.000 0.00 0.00 0.00 2.94
416 417 6.889301 AGAATGCCAAACACATATCATAGG 57.111 37.500 0.00 0.00 0.00 2.57
419 420 8.698210 ACATTTAGAATGCCAAACACATATCAT 58.302 29.630 0.80 0.00 0.00 2.45
420 421 8.065473 ACATTTAGAATGCCAAACACATATCA 57.935 30.769 0.80 0.00 0.00 2.15
424 425 9.723601 AAAATACATTTAGAATGCCAAACACAT 57.276 25.926 0.80 0.00 0.00 3.21
425 426 9.553064 AAAAATACATTTAGAATGCCAAACACA 57.447 25.926 0.80 0.00 0.00 3.72
463 464 6.634436 GTCAAGCATCACAAACTTTGACTAAG 59.366 38.462 8.55 0.00 39.87 2.18
464 465 6.318648 AGTCAAGCATCACAAACTTTGACTAA 59.681 34.615 14.03 0.00 33.77 2.24
465 466 5.822519 AGTCAAGCATCACAAACTTTGACTA 59.177 36.000 14.03 0.00 33.77 2.59
466 467 4.641989 AGTCAAGCATCACAAACTTTGACT 59.358 37.500 8.55 10.83 32.23 3.41
467 468 4.925068 AGTCAAGCATCACAAACTTTGAC 58.075 39.130 8.55 6.98 0.00 3.18
468 469 5.581126 AAGTCAAGCATCACAAACTTTGA 57.419 34.783 8.55 0.00 0.00 2.69
469 470 7.754069 TTAAAGTCAAGCATCACAAACTTTG 57.246 32.000 8.19 0.00 37.48 2.77
470 471 8.770438 TTTTAAAGTCAAGCATCACAAACTTT 57.230 26.923 0.00 0.00 39.51 2.66
471 472 8.770438 TTTTTAAAGTCAAGCATCACAAACTT 57.230 26.923 0.00 0.00 0.00 2.66
602 605 3.668191 GTCACACACACACACACAAAAAG 59.332 43.478 0.00 0.00 0.00 2.27
603 606 3.633235 GTCACACACACACACACAAAAA 58.367 40.909 0.00 0.00 0.00 1.94
604 607 2.349912 CGTCACACACACACACACAAAA 60.350 45.455 0.00 0.00 0.00 2.44
605 608 1.195674 CGTCACACACACACACACAAA 59.804 47.619 0.00 0.00 0.00 2.83
606 609 0.793250 CGTCACACACACACACACAA 59.207 50.000 0.00 0.00 0.00 3.33
640 643 1.306997 ACGTGGGGGATGTCTGGAT 60.307 57.895 0.00 0.00 0.00 3.41
664 667 4.277921 TGTGCATGAAAAATGCTACAGTCA 59.722 37.500 11.27 0.00 44.79 3.41
666 669 4.037803 TGTGTGCATGAAAAATGCTACAGT 59.962 37.500 11.27 0.00 44.79 3.55
667 670 4.548494 TGTGTGCATGAAAAATGCTACAG 58.452 39.130 11.27 0.00 44.79 2.74
668 671 4.581077 TGTGTGCATGAAAAATGCTACA 57.419 36.364 11.27 12.40 44.79 2.74
669 672 5.162794 TGATGTGTGCATGAAAAATGCTAC 58.837 37.500 11.27 10.36 44.79 3.58
670 673 5.047872 ACTGATGTGTGCATGAAAAATGCTA 60.048 36.000 11.27 0.00 44.79 3.49
671 674 4.242475 CTGATGTGTGCATGAAAAATGCT 58.758 39.130 11.27 0.00 44.79 3.79
672 675 3.991773 ACTGATGTGTGCATGAAAAATGC 59.008 39.130 0.00 3.37 44.76 3.56
673 676 5.509605 CACTGATGTGTGCATGAAAAATG 57.490 39.130 0.00 0.00 39.24 2.32
687 690 4.156556 GGACACAAATGCATACACTGATGT 59.843 41.667 0.00 0.00 43.30 3.06
688 691 4.439153 GGGACACAAATGCATACACTGATG 60.439 45.833 0.00 0.00 0.00 3.07
689 692 3.696051 GGGACACAAATGCATACACTGAT 59.304 43.478 0.00 0.00 0.00 2.90
690 693 3.081061 GGGACACAAATGCATACACTGA 58.919 45.455 0.00 0.00 0.00 3.41
691 694 2.159531 CGGGACACAAATGCATACACTG 60.160 50.000 0.00 0.00 0.00 3.66
692 695 2.083774 CGGGACACAAATGCATACACT 58.916 47.619 0.00 0.00 0.00 3.55
693 696 2.080693 TCGGGACACAAATGCATACAC 58.919 47.619 0.00 0.00 0.00 2.90
694 697 2.481289 TCGGGACACAAATGCATACA 57.519 45.000 0.00 0.00 0.00 2.29
710 713 0.250858 TGGCATGGGCTGATTATCGG 60.251 55.000 0.00 0.00 40.87 4.18
735 738 2.307768 AGCATGCATCCTGAATTCCTG 58.692 47.619 21.98 0.00 0.00 3.86
736 739 2.693591 CAAGCATGCATCCTGAATTCCT 59.306 45.455 21.98 0.00 0.00 3.36
737 740 2.429610 ACAAGCATGCATCCTGAATTCC 59.570 45.455 21.98 0.00 0.00 3.01
738 741 3.795623 ACAAGCATGCATCCTGAATTC 57.204 42.857 21.98 0.00 0.00 2.17
739 742 4.275810 ACTACAAGCATGCATCCTGAATT 58.724 39.130 21.98 0.00 0.00 2.17
740 743 3.894759 ACTACAAGCATGCATCCTGAAT 58.105 40.909 21.98 0.00 0.00 2.57
741 744 3.354948 ACTACAAGCATGCATCCTGAA 57.645 42.857 21.98 0.00 0.00 3.02
742 745 3.452264 ACTACTACAAGCATGCATCCTGA 59.548 43.478 21.98 0.00 0.00 3.86
747 750 2.989909 TGCACTACTACAAGCATGCAT 58.010 42.857 21.98 4.57 38.11 3.96
759 762 5.220710 AGATCTCAACAAGTTGCACTACT 57.779 39.130 8.04 0.00 40.24 2.57
765 768 5.009010 TCAGGAAAAGATCTCAACAAGTTGC 59.991 40.000 8.04 0.00 40.24 4.17
780 783 8.220559 TGATTATTTAGGGGATCTCAGGAAAAG 58.779 37.037 0.00 0.00 0.00 2.27
795 798 4.389077 GCCCGATCGACTTGATTATTTAGG 59.611 45.833 18.66 4.76 37.47 2.69
808 811 2.202756 GGACAGTGCCCGATCGAC 60.203 66.667 18.66 7.04 0.00 4.20
892 895 1.011451 GTGCGTGAGAGCTCCAAGAC 61.011 60.000 10.93 7.60 38.13 3.01
905 908 3.883744 GAGGGAGGGTGTGTGCGTG 62.884 68.421 0.00 0.00 0.00 5.34
906 909 3.626924 GAGGGAGGGTGTGTGCGT 61.627 66.667 0.00 0.00 0.00 5.24
907 910 4.394712 GGAGGGAGGGTGTGTGCG 62.395 72.222 0.00 0.00 0.00 5.34
908 911 2.543067 GATGGAGGGAGGGTGTGTGC 62.543 65.000 0.00 0.00 0.00 4.57
936 939 2.093181 TGTGCGTGGCTAAGGACAATAT 60.093 45.455 7.93 0.00 34.15 1.28
937 940 1.276705 TGTGCGTGGCTAAGGACAATA 59.723 47.619 7.93 0.00 34.15 1.90
938 941 0.036164 TGTGCGTGGCTAAGGACAAT 59.964 50.000 7.93 0.00 34.15 2.71
939 942 0.602638 CTGTGCGTGGCTAAGGACAA 60.603 55.000 11.45 0.00 36.36 3.18
942 945 2.047274 GCTGTGCGTGGCTAAGGA 60.047 61.111 0.00 0.00 0.00 3.36
953 956 3.720193 CGTGCTCTGGTGCTGTGC 61.720 66.667 0.00 0.00 0.00 4.57
972 975 0.097150 GAATCGAAAAGGGAGCACGC 59.903 55.000 0.00 0.00 0.00 5.34
1141 1157 0.908656 ATGAGCTGGCAGGTGACTCT 60.909 55.000 25.83 6.87 40.21 3.24
1211 1227 3.640407 GCACTCTGGCTGTGGGGA 61.640 66.667 7.65 0.00 36.08 4.81
1349 1381 1.959226 GCACCACACCACCGTACAG 60.959 63.158 0.00 0.00 0.00 2.74
1355 1387 3.289834 CAGCTGCACCACACCACC 61.290 66.667 0.00 0.00 0.00 4.61
1431 1943 0.612229 TCAGCAGGCTCTTCTTCAGG 59.388 55.000 0.00 0.00 0.00 3.86
1472 1987 1.137513 GTTGAAGGTCACCTCGAACG 58.862 55.000 0.00 0.00 35.97 3.95
1700 2218 2.417787 GCAAGCAAAATCCATGGGAGAC 60.418 50.000 13.02 0.00 34.05 3.36
1701 2219 1.826720 GCAAGCAAAATCCATGGGAGA 59.173 47.619 13.02 0.00 34.05 3.71
2162 2791 1.007734 GAACTGCTCGTCACGTGGA 60.008 57.895 17.00 4.94 0.00 4.02
2296 2931 3.516615 GTGTAGAGCTTGAGGATGTCAC 58.483 50.000 0.00 0.00 33.71 3.67
2495 4128 9.517868 GGTATATGTAGTGTGTAGAAGGAGTAT 57.482 37.037 0.00 0.00 0.00 2.12
2496 4129 8.721479 AGGTATATGTAGTGTGTAGAAGGAGTA 58.279 37.037 0.00 0.00 0.00 2.59
2497 4130 7.584532 AGGTATATGTAGTGTGTAGAAGGAGT 58.415 38.462 0.00 0.00 0.00 3.85
2498 4131 9.570468 TTAGGTATATGTAGTGTGTAGAAGGAG 57.430 37.037 0.00 0.00 0.00 3.69
2499 4132 9.925545 TTTAGGTATATGTAGTGTGTAGAAGGA 57.074 33.333 0.00 0.00 0.00 3.36
2784 6829 6.916387 GCACGCGGTTGAGTACATATATATAT 59.084 38.462 12.47 0.00 0.00 0.86
2785 6830 6.260377 GCACGCGGTTGAGTACATATATATA 58.740 40.000 12.47 0.00 0.00 0.86
2816 6861 4.077188 GAACTCCTGCACGCACGC 62.077 66.667 0.00 0.00 0.00 5.34
3412 7583 3.884774 TGCTTGCCCGGGAACACT 61.885 61.111 29.31 0.00 0.00 3.55
3641 7903 2.414594 GCGGCGTACGGGTAATCT 59.585 61.111 18.39 0.00 44.51 2.40
3686 7948 0.542938 AGTCTGCTACCCACTGCTCA 60.543 55.000 0.00 0.00 0.00 4.26
4490 8806 3.852286 ACGACGATGCATTAACCAGTAA 58.148 40.909 0.00 0.00 0.00 2.24
4524 8840 7.418337 TCTTATTATTGGGAAAAAGAAGGGC 57.582 36.000 0.00 0.00 0.00 5.19
4785 9109 4.062677 AGTATCGCCGGCTTATGTTTTA 57.937 40.909 26.68 0.00 0.00 1.52
5039 9363 8.215736 GGTACTATATTTAGCCCCAAAGAGAAA 58.784 37.037 0.00 0.00 0.00 2.52
5058 9382 6.042552 CAGAATGTTGGGATCTCTGGTACTAT 59.957 42.308 0.00 0.00 31.77 2.12
5122 9446 2.162681 GCCTTAGATGCCCGCATAATT 58.837 47.619 1.33 0.00 36.70 1.40
5149 9473 5.891551 ACCCGCTTTTCATTGATAACCTAAT 59.108 36.000 0.00 0.00 0.00 1.73
5170 9494 2.038557 TCTCACTTGCTTCCTGTTACCC 59.961 50.000 0.00 0.00 0.00 3.69
5194 9518 3.292460 ACCAAACCAAACATCTTCCGAA 58.708 40.909 0.00 0.00 0.00 4.30
5196 9520 4.277423 AGTTACCAAACCAAACATCTTCCG 59.723 41.667 0.00 0.00 36.15 4.30
5207 9531 2.041081 CCATGGGAGAGTTACCAAACCA 59.959 50.000 2.85 0.00 40.73 3.67
5212 9536 1.004277 GTTGCCATGGGAGAGTTACCA 59.996 52.381 15.13 0.00 41.76 3.25
5285 9609 2.495155 TGACAACCATCCCAGACATG 57.505 50.000 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.