Multiple sequence alignment - TraesCS5D01G510300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G510300 chr5D 100.000 4653 0 0 1 4653 535486818 535491470 0.000000e+00 8593.0
1 TraesCS5D01G510300 chr5D 79.444 1080 182 20 2915 3988 535631182 535632227 0.000000e+00 728.0
2 TraesCS5D01G510300 chr5D 76.494 987 194 34 2822 3794 535549718 535550680 2.150000e-138 503.0
3 TraesCS5D01G510300 chr5D 89.925 268 19 3 1 260 9737496 9737763 6.410000e-89 339.0
4 TraesCS5D01G510300 chr5D 100.000 154 0 0 5019 5172 535491836 535491989 8.480000e-73 285.0
5 TraesCS5D01G510300 chr5D 81.720 279 42 5 2343 2617 535861964 535862237 1.870000e-54 224.0
6 TraesCS5D01G510300 chr5D 80.797 276 47 6 2343 2616 535727746 535728017 1.460000e-50 211.0
7 TraesCS5D01G510300 chr5D 78.924 223 32 12 2350 2560 535712795 535713014 2.510000e-28 137.0
8 TraesCS5D01G510300 chr5B 95.535 3001 73 24 1289 4254 676161981 676164955 0.000000e+00 4743.0
9 TraesCS5D01G510300 chr5B 81.109 1281 222 16 2915 4178 676209799 676211076 0.000000e+00 1007.0
10 TraesCS5D01G510300 chr5B 92.997 357 10 2 829 1184 676161387 676161729 1.660000e-139 507.0
11 TraesCS5D01G510300 chr5B 82.375 539 69 18 262 792 676160869 676161389 3.670000e-121 446.0
12 TraesCS5D01G510300 chr5B 91.837 245 15 1 4276 4515 676164942 676165186 2.310000e-88 337.0
13 TraesCS5D01G510300 chr5B 81.793 368 49 12 2343 2707 676204429 676204781 5.070000e-75 292.0
14 TraesCS5D01G510300 chr5B 79.779 272 49 4 2348 2617 676271930 676272197 5.290000e-45 193.0
15 TraesCS5D01G510300 chr5B 80.303 132 19 6 2060 2186 579592397 579592268 5.510000e-15 93.5
16 TraesCS5D01G510300 chr5B 86.667 60 6 2 446 504 382566351 382566409 1.200000e-06 65.8
17 TraesCS5D01G510300 chr4A 90.746 670 38 10 733 1393 636582261 636581607 0.000000e+00 872.0
18 TraesCS5D01G510300 chr4A 81.455 275 47 4 2343 2616 636218527 636218256 6.740000e-54 222.0
19 TraesCS5D01G510300 chr4A 79.643 280 46 9 2343 2617 636044508 636044235 1.900000e-44 191.0
20 TraesCS5D01G510300 chr3D 79.391 854 150 18 2896 3736 404853187 404852347 3.470000e-161 579.0
21 TraesCS5D01G510300 chr3B 90.262 267 21 4 1 263 745476729 745476464 1.380000e-90 344.0
22 TraesCS5D01G510300 chr3B 100.000 28 0 0 1295 1322 207748464 207748437 9.000000e-03 52.8
23 TraesCS5D01G510300 chr6D 90.458 262 22 3 1 260 73442519 73442259 4.960000e-90 342.0
24 TraesCS5D01G510300 chr2D 90.421 261 22 2 1 259 401105705 401105964 1.780000e-89 340.0
25 TraesCS5D01G510300 chr2D 88.889 279 21 4 1 269 139178025 139177747 8.300000e-88 335.0
26 TraesCS5D01G510300 chr2D 81.522 92 9 6 505 592 645993077 645993164 9.290000e-08 69.4
27 TraesCS5D01G510300 chrUn 89.850 266 21 2 1 260 108473876 108474141 2.310000e-88 337.0
28 TraesCS5D01G510300 chrUn 77.670 206 26 9 1703 1888 97100694 97100899 1.970000e-19 108.0
29 TraesCS5D01G510300 chr7D 90.347 259 22 3 1 258 207171112 207170856 2.310000e-88 337.0
30 TraesCS5D01G510300 chr7D 89.850 266 20 3 1 260 571615584 571615848 8.300000e-88 335.0
31 TraesCS5D01G510300 chr7D 100.000 28 0 0 1301 1328 543241585 543241558 9.000000e-03 52.8
32 TraesCS5D01G510300 chr4D 89.773 264 23 3 1 260 116249984 116250247 8.300000e-88 335.0
33 TraesCS5D01G510300 chr1D 76.882 372 56 20 1838 2187 54172994 54172631 3.180000e-42 183.0
34 TraesCS5D01G510300 chr1D 80.645 93 16 2 505 596 19553287 19553378 2.580000e-08 71.3
35 TraesCS5D01G510300 chr2B 79.006 181 26 5 425 594 184603019 184603198 4.230000e-21 113.0
36 TraesCS5D01G510300 chr2B 79.006 181 25 6 425 593 184652564 184652743 1.520000e-20 111.0
37 TraesCS5D01G510300 chr2B 78.453 181 26 6 425 593 184636892 184637071 7.080000e-19 106.0
38 TraesCS5D01G510300 chr2B 85.882 85 11 1 2102 2186 777966523 777966606 7.130000e-14 89.8
39 TraesCS5D01G510300 chr2B 84.706 85 12 1 2102 2186 778028211 778028294 3.320000e-12 84.2
40 TraesCS5D01G510300 chr2B 82.979 94 13 3 508 599 789540714 789540622 1.190000e-11 82.4
41 TraesCS5D01G510300 chr2B 91.071 56 3 2 1283 1338 622914058 622914005 2.000000e-09 75.0
42 TraesCS5D01G510300 chr1B 85.714 84 11 1 2102 2185 629179964 629179882 2.570000e-13 87.9
43 TraesCS5D01G510300 chr1A 84.091 88 12 2 2102 2188 7318335 7318249 3.320000e-12 84.2
44 TraesCS5D01G510300 chr1A 87.500 72 9 0 1703 1774 7318729 7318658 3.320000e-12 84.2
45 TraesCS5D01G510300 chr1A 81.818 88 15 1 2102 2189 565749750 565749664 7.180000e-09 73.1
46 TraesCS5D01G510300 chr7A 78.626 131 21 7 2060 2185 289117318 289117190 4.290000e-11 80.5
47 TraesCS5D01G510300 chr7B 90.000 50 5 0 1280 1329 65664588 65664539 1.200000e-06 65.8
48 TraesCS5D01G510300 chr6A 95.000 40 2 0 1291 1330 565476073 565476112 4.320000e-06 63.9
49 TraesCS5D01G510300 chr6B 94.872 39 2 0 1291 1329 637038215 637038253 1.560000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G510300 chr5D 535486818 535491989 5171 False 4439.00 8593 100.000 1 5172 2 chr5D.!!$F7 5171
1 TraesCS5D01G510300 chr5D 535631182 535632227 1045 False 728.00 728 79.444 2915 3988 1 chr5D.!!$F3 1073
2 TraesCS5D01G510300 chr5D 535549718 535550680 962 False 503.00 503 76.494 2822 3794 1 chr5D.!!$F2 972
3 TraesCS5D01G510300 chr5B 676160869 676165186 4317 False 1508.25 4743 90.686 262 4515 4 chr5B.!!$F5 4253
4 TraesCS5D01G510300 chr5B 676209799 676211076 1277 False 1007.00 1007 81.109 2915 4178 1 chr5B.!!$F3 1263
5 TraesCS5D01G510300 chr4A 636581607 636582261 654 True 872.00 872 90.746 733 1393 1 chr4A.!!$R3 660
6 TraesCS5D01G510300 chr3D 404852347 404853187 840 True 579.00 579 79.391 2896 3736 1 chr3D.!!$R1 840

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
230 231 0.026285 GATAGATTTTGCGTGCGCGT 59.974 50.0 22.18 0.0 45.51 6.01 F
1212 1240 0.037232 AGAAAGGTGCGTACAGAGCC 60.037 55.0 5.86 0.0 0.00 4.70 F
1943 2144 1.312371 ATTTGCGGGGGACATTGACG 61.312 55.0 0.00 0.0 0.00 4.35 F
3138 3344 0.181114 GTGCCTAGATCACCCATGCA 59.819 55.0 0.00 0.0 0.00 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1922 2123 0.038890 TCAATGTCCCCCGCAAATGA 59.961 50.0 0.00 0.0 0.00 2.57 R
2095 2297 1.019805 GCACCACCGCTTAACTCTCC 61.020 60.0 0.00 0.0 0.00 3.71 R
3431 3647 0.604578 GCCCAATTGAGCAAGAGCAA 59.395 50.0 7.12 0.0 45.49 3.91 R
4387 4625 0.100503 AGCAAAACGCACCAGACAAC 59.899 50.0 0.00 0.0 46.13 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.541224 ATCCACTACCTCGCCATCT 57.459 52.632 0.00 0.00 0.00 2.90
19 20 1.794714 ATCCACTACCTCGCCATCTT 58.205 50.000 0.00 0.00 0.00 2.40
20 21 0.824109 TCCACTACCTCGCCATCTTG 59.176 55.000 0.00 0.00 0.00 3.02
21 22 0.811616 CCACTACCTCGCCATCTTGC 60.812 60.000 0.00 0.00 0.00 4.01
22 23 0.176680 CACTACCTCGCCATCTTGCT 59.823 55.000 0.00 0.00 0.00 3.91
23 24 0.176680 ACTACCTCGCCATCTTGCTG 59.823 55.000 0.00 0.00 0.00 4.41
24 25 0.531532 CTACCTCGCCATCTTGCTGG 60.532 60.000 0.00 0.00 39.45 4.85
25 26 0.975556 TACCTCGCCATCTTGCTGGA 60.976 55.000 0.00 0.00 38.69 3.86
26 27 1.147824 CCTCGCCATCTTGCTGGAT 59.852 57.895 0.00 0.00 38.69 3.41
27 28 0.883814 CCTCGCCATCTTGCTGGATC 60.884 60.000 0.00 0.00 38.69 3.36
28 29 0.179065 CTCGCCATCTTGCTGGATCA 60.179 55.000 0.00 0.00 38.69 2.92
29 30 0.252761 TCGCCATCTTGCTGGATCAA 59.747 50.000 0.00 0.00 38.69 2.57
30 31 0.661552 CGCCATCTTGCTGGATCAAG 59.338 55.000 0.00 0.00 43.53 3.02
35 36 2.119801 TCTTGCTGGATCAAGAAGGC 57.880 50.000 0.00 0.00 46.56 4.35
36 37 0.731417 CTTGCTGGATCAAGAAGGCG 59.269 55.000 0.00 0.00 44.61 5.52
37 38 0.036732 TTGCTGGATCAAGAAGGCGT 59.963 50.000 0.00 0.00 0.00 5.68
38 39 0.674581 TGCTGGATCAAGAAGGCGTG 60.675 55.000 0.00 0.00 0.00 5.34
39 40 1.372087 GCTGGATCAAGAAGGCGTGG 61.372 60.000 0.00 0.00 0.00 4.94
40 41 0.250234 CTGGATCAAGAAGGCGTGGA 59.750 55.000 0.00 0.00 0.00 4.02
41 42 0.036388 TGGATCAAGAAGGCGTGGAC 60.036 55.000 0.00 0.00 0.00 4.02
42 43 1.084370 GGATCAAGAAGGCGTGGACG 61.084 60.000 0.00 0.00 43.27 4.79
43 44 0.389948 GATCAAGAAGGCGTGGACGT 60.390 55.000 0.52 0.00 42.22 4.34
44 45 0.389948 ATCAAGAAGGCGTGGACGTC 60.390 55.000 7.13 7.13 45.56 4.34
52 53 4.039357 CGTGGACGTCACCGAGCT 62.039 66.667 18.91 0.00 43.23 4.09
53 54 2.430921 GTGGACGTCACCGAGCTG 60.431 66.667 18.91 0.00 40.39 4.24
54 55 2.596338 TGGACGTCACCGAGCTGA 60.596 61.111 18.91 0.00 37.88 4.26
55 56 2.197605 TGGACGTCACCGAGCTGAA 61.198 57.895 18.91 0.00 37.88 3.02
56 57 1.733399 GGACGTCACCGAGCTGAAC 60.733 63.158 18.91 0.00 37.88 3.18
57 58 2.050351 ACGTCACCGAGCTGAACG 60.050 61.111 0.00 0.00 37.88 3.95
58 59 2.050351 CGTCACCGAGCTGAACGT 60.050 61.111 0.00 0.00 35.63 3.99
59 60 2.365068 CGTCACCGAGCTGAACGTG 61.365 63.158 0.00 0.00 35.63 4.49
60 61 1.299926 GTCACCGAGCTGAACGTGT 60.300 57.895 0.00 0.00 0.00 4.49
61 62 1.299850 TCACCGAGCTGAACGTGTG 60.300 57.895 0.00 0.00 35.24 3.82
62 63 2.661866 ACCGAGCTGAACGTGTGC 60.662 61.111 0.00 0.00 0.00 4.57
63 64 2.356313 CCGAGCTGAACGTGTGCT 60.356 61.111 9.46 9.46 40.02 4.40
64 65 2.661566 CCGAGCTGAACGTGTGCTG 61.662 63.158 13.62 7.28 37.16 4.41
65 66 1.661509 CGAGCTGAACGTGTGCTGA 60.662 57.895 13.62 0.00 37.16 4.26
66 67 1.215014 CGAGCTGAACGTGTGCTGAA 61.215 55.000 13.62 0.00 37.16 3.02
67 68 0.233332 GAGCTGAACGTGTGCTGAAC 59.767 55.000 13.62 0.00 37.16 3.18
68 69 1.083401 GCTGAACGTGTGCTGAACG 60.083 57.895 0.00 5.11 46.32 3.95
69 70 1.083401 CTGAACGTGTGCTGAACGC 60.083 57.895 0.00 0.00 44.80 4.84
74 75 3.414700 GTGTGCTGAACGCGGAGG 61.415 66.667 12.47 0.00 43.27 4.30
75 76 3.923864 TGTGCTGAACGCGGAGGT 61.924 61.111 12.47 0.00 43.27 3.85
76 77 3.414700 GTGCTGAACGCGGAGGTG 61.415 66.667 12.47 0.00 43.27 4.00
87 88 2.505557 GGAGGTGCCGTACGTTCG 60.506 66.667 15.21 7.68 0.00 3.95
94 95 2.872925 CCGTACGTTCGGCACTCG 60.873 66.667 20.80 0.00 43.96 4.18
102 103 2.967397 TCGGCACTCGATCGGTTT 59.033 55.556 16.41 0.00 43.74 3.27
103 104 1.445410 TCGGCACTCGATCGGTTTG 60.445 57.895 16.41 10.86 43.74 2.93
104 105 1.445410 CGGCACTCGATCGGTTTGA 60.445 57.895 16.41 0.00 42.43 2.69
105 106 1.683790 CGGCACTCGATCGGTTTGAC 61.684 60.000 16.41 10.99 42.43 3.18
106 107 1.359459 GGCACTCGATCGGTTTGACC 61.359 60.000 16.41 11.04 34.05 4.02
119 120 3.948851 GGTTTGACCGTGAAGAAAGTTC 58.051 45.455 0.00 0.00 0.00 3.01
120 121 3.545426 GGTTTGACCGTGAAGAAAGTTCG 60.545 47.826 0.00 0.00 0.00 3.95
121 122 2.875087 TGACCGTGAAGAAAGTTCGA 57.125 45.000 0.00 0.00 0.00 3.71
122 123 2.739292 TGACCGTGAAGAAAGTTCGAG 58.261 47.619 0.00 0.00 0.00 4.04
123 124 2.100252 TGACCGTGAAGAAAGTTCGAGT 59.900 45.455 0.00 0.00 0.00 4.18
124 125 3.316029 TGACCGTGAAGAAAGTTCGAGTA 59.684 43.478 0.00 0.00 0.00 2.59
125 126 3.636381 ACCGTGAAGAAAGTTCGAGTAC 58.364 45.455 0.00 0.00 0.00 2.73
126 127 3.067180 ACCGTGAAGAAAGTTCGAGTACA 59.933 43.478 0.00 0.00 0.00 2.90
127 128 4.235360 CCGTGAAGAAAGTTCGAGTACAT 58.765 43.478 0.00 0.00 0.00 2.29
128 129 4.323868 CCGTGAAGAAAGTTCGAGTACATC 59.676 45.833 0.00 0.00 0.00 3.06
129 130 4.915667 CGTGAAGAAAGTTCGAGTACATCA 59.084 41.667 0.00 0.00 0.00 3.07
130 131 5.401376 CGTGAAGAAAGTTCGAGTACATCAA 59.599 40.000 0.00 0.00 0.00 2.57
131 132 6.582264 GTGAAGAAAGTTCGAGTACATCAAC 58.418 40.000 0.00 0.00 0.00 3.18
132 133 5.694910 TGAAGAAAGTTCGAGTACATCAACC 59.305 40.000 0.00 0.00 0.00 3.77
133 134 4.235360 AGAAAGTTCGAGTACATCAACCG 58.765 43.478 0.00 0.00 0.00 4.44
134 135 1.992170 AGTTCGAGTACATCAACCGC 58.008 50.000 0.00 0.00 0.00 5.68
135 136 0.638746 GTTCGAGTACATCAACCGCG 59.361 55.000 0.00 0.00 0.00 6.46
136 137 0.241749 TTCGAGTACATCAACCGCGT 59.758 50.000 4.92 0.00 0.00 6.01
137 138 0.241749 TCGAGTACATCAACCGCGTT 59.758 50.000 4.92 0.00 0.00 4.84
138 139 0.365523 CGAGTACATCAACCGCGTTG 59.634 55.000 4.92 10.14 43.99 4.10
139 140 1.425412 GAGTACATCAACCGCGTTGT 58.575 50.000 16.97 9.99 43.23 3.32
140 141 1.389106 GAGTACATCAACCGCGTTGTC 59.611 52.381 16.97 6.54 43.23 3.18
141 142 1.141645 GTACATCAACCGCGTTGTCA 58.858 50.000 16.97 4.13 43.23 3.58
142 143 1.527736 GTACATCAACCGCGTTGTCAA 59.472 47.619 16.97 3.56 43.23 3.18
143 144 1.018148 ACATCAACCGCGTTGTCAAA 58.982 45.000 16.97 3.28 43.23 2.69
144 145 1.268335 ACATCAACCGCGTTGTCAAAC 60.268 47.619 16.97 0.00 43.23 2.93
152 153 4.205584 GTTGTCAAACGCTTCCGC 57.794 55.556 0.00 0.00 38.22 5.54
153 154 1.647084 GTTGTCAAACGCTTCCGCT 59.353 52.632 0.00 0.00 38.22 5.52
154 155 0.028902 GTTGTCAAACGCTTCCGCTT 59.971 50.000 0.00 0.00 38.22 4.68
155 156 1.262151 GTTGTCAAACGCTTCCGCTTA 59.738 47.619 0.00 0.00 38.22 3.09
156 157 0.863144 TGTCAAACGCTTCCGCTTAC 59.137 50.000 0.00 0.00 38.22 2.34
157 158 0.179258 GTCAAACGCTTCCGCTTACG 60.179 55.000 0.00 0.00 38.22 3.18
158 159 0.318869 TCAAACGCTTCCGCTTACGA 60.319 50.000 0.00 0.00 43.93 3.43
159 160 0.719465 CAAACGCTTCCGCTTACGAT 59.281 50.000 0.00 0.00 43.93 3.73
160 161 0.997196 AAACGCTTCCGCTTACGATC 59.003 50.000 0.00 0.00 43.93 3.69
161 162 0.172803 AACGCTTCCGCTTACGATCT 59.827 50.000 0.00 0.00 43.93 2.75
162 163 1.019673 ACGCTTCCGCTTACGATCTA 58.980 50.000 0.00 0.00 43.93 1.98
163 164 1.268437 ACGCTTCCGCTTACGATCTAC 60.268 52.381 0.00 0.00 43.93 2.59
164 165 4.735890 ACGCTTCCGCTTACGATCTACG 62.736 54.545 0.00 0.00 43.93 3.51
165 166 1.003116 GCTTCCGCTTACGATCTACGA 60.003 52.381 0.00 0.00 45.77 3.43
166 167 2.906153 CTTCCGCTTACGATCTACGAG 58.094 52.381 0.00 0.00 45.77 4.18
167 168 1.224075 TCCGCTTACGATCTACGAGG 58.776 55.000 0.00 0.00 45.77 4.63
168 169 1.202568 TCCGCTTACGATCTACGAGGA 60.203 52.381 0.00 0.00 45.77 3.71
169 170 1.805345 CCGCTTACGATCTACGAGGAT 59.195 52.381 0.00 0.00 45.77 3.24
170 171 2.998670 CCGCTTACGATCTACGAGGATA 59.001 50.000 0.00 0.00 45.77 2.59
171 172 3.181522 CCGCTTACGATCTACGAGGATAC 60.182 52.174 0.00 0.00 45.77 2.24
172 173 3.481628 CGCTTACGATCTACGAGGATACG 60.482 52.174 0.00 0.00 45.77 3.06
173 174 5.892877 CGCTTACGATCTACGAGGATACGT 61.893 50.000 0.00 0.00 45.10 3.57
174 175 4.623167 GCTTACGATCTACGAGGATACGTA 59.377 45.833 0.00 0.00 44.72 3.57
182 183 2.983229 ACGAGGATACGTAGACACACT 58.017 47.619 0.08 0.00 44.72 3.55
183 184 2.935201 ACGAGGATACGTAGACACACTC 59.065 50.000 0.08 1.79 44.72 3.51
184 185 3.196463 CGAGGATACGTAGACACACTCT 58.804 50.000 0.08 0.00 46.39 3.24
185 186 3.245754 CGAGGATACGTAGACACACTCTC 59.754 52.174 0.08 0.00 46.39 3.20
186 187 3.543665 AGGATACGTAGACACACTCTCC 58.456 50.000 0.08 0.00 46.39 3.71
187 188 2.617774 GGATACGTAGACACACTCTCCC 59.382 54.545 0.08 0.00 0.00 4.30
188 189 2.119801 TACGTAGACACACTCTCCCC 57.880 55.000 0.00 0.00 0.00 4.81
189 190 0.611340 ACGTAGACACACTCTCCCCC 60.611 60.000 0.00 0.00 0.00 5.40
190 191 0.323542 CGTAGACACACTCTCCCCCT 60.324 60.000 0.00 0.00 0.00 4.79
191 192 1.476477 GTAGACACACTCTCCCCCTC 58.524 60.000 0.00 0.00 0.00 4.30
192 193 0.034380 TAGACACACTCTCCCCCTCG 60.034 60.000 0.00 0.00 0.00 4.63
193 194 1.606889 GACACACTCTCCCCCTCGT 60.607 63.158 0.00 0.00 0.00 4.18
194 195 1.152312 ACACACTCTCCCCCTCGTT 60.152 57.895 0.00 0.00 0.00 3.85
195 196 0.113776 ACACACTCTCCCCCTCGTTA 59.886 55.000 0.00 0.00 0.00 3.18
196 197 1.273098 ACACACTCTCCCCCTCGTTAT 60.273 52.381 0.00 0.00 0.00 1.89
197 198 1.831736 CACACTCTCCCCCTCGTTATT 59.168 52.381 0.00 0.00 0.00 1.40
198 199 3.028850 CACACTCTCCCCCTCGTTATTA 58.971 50.000 0.00 0.00 0.00 0.98
199 200 3.641906 CACACTCTCCCCCTCGTTATTAT 59.358 47.826 0.00 0.00 0.00 1.28
200 201 3.641906 ACACTCTCCCCCTCGTTATTATG 59.358 47.826 0.00 0.00 0.00 1.90
201 202 2.633481 ACTCTCCCCCTCGTTATTATGC 59.367 50.000 0.00 0.00 0.00 3.14
202 203 2.632996 CTCTCCCCCTCGTTATTATGCA 59.367 50.000 0.00 0.00 0.00 3.96
203 204 3.248024 TCTCCCCCTCGTTATTATGCAT 58.752 45.455 3.79 3.79 0.00 3.96
204 205 3.260884 TCTCCCCCTCGTTATTATGCATC 59.739 47.826 0.19 0.00 0.00 3.91
205 206 3.248024 TCCCCCTCGTTATTATGCATCT 58.752 45.455 0.19 0.00 0.00 2.90
206 207 3.260884 TCCCCCTCGTTATTATGCATCTC 59.739 47.826 0.19 0.00 0.00 2.75
207 208 3.600388 CCCCTCGTTATTATGCATCTCC 58.400 50.000 0.19 0.00 0.00 3.71
208 209 3.007940 CCCCTCGTTATTATGCATCTCCA 59.992 47.826 0.19 0.00 0.00 3.86
209 210 4.323792 CCCCTCGTTATTATGCATCTCCAT 60.324 45.833 0.19 0.00 0.00 3.41
210 211 4.633126 CCCTCGTTATTATGCATCTCCATG 59.367 45.833 0.19 0.00 0.00 3.66
211 212 4.633126 CCTCGTTATTATGCATCTCCATGG 59.367 45.833 4.97 4.97 0.00 3.66
212 213 5.482006 CTCGTTATTATGCATCTCCATGGA 58.518 41.667 15.27 15.27 34.38 3.41
213 214 6.053632 TCGTTATTATGCATCTCCATGGAT 57.946 37.500 16.63 1.02 43.17 3.41
214 215 7.181569 TCGTTATTATGCATCTCCATGGATA 57.818 36.000 16.63 8.92 41.14 2.59
215 216 7.267857 TCGTTATTATGCATCTCCATGGATAG 58.732 38.462 16.63 9.32 42.43 2.08
216 217 7.124147 TCGTTATTATGCATCTCCATGGATAGA 59.876 37.037 16.63 10.76 42.43 1.98
217 218 7.930325 CGTTATTATGCATCTCCATGGATAGAT 59.070 37.037 16.63 12.78 42.43 1.98
218 219 9.624373 GTTATTATGCATCTCCATGGATAGATT 57.376 33.333 16.63 3.61 42.43 2.40
221 222 6.835819 ATGCATCTCCATGGATAGATTTTG 57.164 37.500 16.63 6.79 39.19 2.44
222 223 4.521639 TGCATCTCCATGGATAGATTTTGC 59.478 41.667 16.63 16.18 29.93 3.68
223 224 4.379186 GCATCTCCATGGATAGATTTTGCG 60.379 45.833 16.63 4.61 29.93 4.85
224 225 4.422073 TCTCCATGGATAGATTTTGCGT 57.578 40.909 16.63 0.00 0.00 5.24
225 226 4.129380 TCTCCATGGATAGATTTTGCGTG 58.871 43.478 16.63 0.00 0.00 5.34
226 227 2.618241 TCCATGGATAGATTTTGCGTGC 59.382 45.455 11.44 0.00 0.00 5.34
227 228 2.602933 CCATGGATAGATTTTGCGTGCG 60.603 50.000 5.56 0.00 0.00 5.34
228 229 0.376852 TGGATAGATTTTGCGTGCGC 59.623 50.000 9.85 9.85 42.35 6.09
229 230 0.654472 GGATAGATTTTGCGTGCGCG 60.654 55.000 16.86 16.86 45.51 6.86
230 231 0.026285 GATAGATTTTGCGTGCGCGT 59.974 50.000 22.18 0.00 45.51 6.01
231 232 1.256895 GATAGATTTTGCGTGCGCGTA 59.743 47.619 22.18 14.97 45.51 4.42
232 233 0.643310 TAGATTTTGCGTGCGCGTAG 59.357 50.000 22.18 0.00 45.51 3.51
233 234 1.131826 GATTTTGCGTGCGCGTAGT 59.868 52.632 22.18 6.80 45.51 2.73
234 235 0.452122 GATTTTGCGTGCGCGTAGTT 60.452 50.000 22.18 5.21 45.51 2.24
235 236 0.040781 ATTTTGCGTGCGCGTAGTTT 60.041 45.000 22.18 2.07 45.51 2.66
236 237 0.248134 TTTTGCGTGCGCGTAGTTTT 60.248 45.000 22.18 0.00 45.51 2.43
237 238 0.248134 TTTGCGTGCGCGTAGTTTTT 60.248 45.000 22.18 0.00 45.51 1.94
255 256 2.517650 TTTTCCATGCAACGTTTCCC 57.482 45.000 0.00 0.00 0.00 3.97
256 257 1.403814 TTTCCATGCAACGTTTCCCA 58.596 45.000 0.00 0.00 0.00 4.37
257 258 1.403814 TTCCATGCAACGTTTCCCAA 58.596 45.000 0.00 0.00 0.00 4.12
258 259 0.671251 TCCATGCAACGTTTCCCAAC 59.329 50.000 0.00 0.00 0.00 3.77
259 260 0.387202 CCATGCAACGTTTCCCAACA 59.613 50.000 0.00 0.00 32.54 3.33
260 261 1.486439 CATGCAACGTTTCCCAACAC 58.514 50.000 0.00 0.00 32.54 3.32
267 268 2.291365 ACGTTTCCCAACACTTACACC 58.709 47.619 0.00 0.00 32.54 4.16
275 276 2.664568 CCAACACTTACACCGTGTATCG 59.335 50.000 12.14 9.07 44.25 2.92
289 290 4.487948 CGTGTATCGTAAGGTGAAAAGGA 58.512 43.478 0.00 0.00 38.47 3.36
303 304 5.179555 GGTGAAAAGGACACAAGACATAGAC 59.820 44.000 0.00 0.00 39.65 2.59
314 315 7.105588 ACACAAGACATAGACATGCTCATAAA 58.894 34.615 0.00 0.00 35.39 1.40
342 343 9.998106 TTTACTCAAGTCTACAAGCTAAAGAAT 57.002 29.630 0.00 0.00 0.00 2.40
347 348 8.982723 TCAAGTCTACAAGCTAAAGAATATCCT 58.017 33.333 0.00 0.00 0.00 3.24
349 350 9.606631 AAGTCTACAAGCTAAAGAATATCCTTG 57.393 33.333 0.00 0.00 36.62 3.61
354 355 8.507524 ACAAGCTAAAGAATATCCTTGGTAAC 57.492 34.615 0.00 0.00 35.29 2.50
355 356 7.280205 ACAAGCTAAAGAATATCCTTGGTAACG 59.720 37.037 0.00 0.00 42.51 3.18
357 358 6.985059 AGCTAAAGAATATCCTTGGTAACGAC 59.015 38.462 0.00 0.00 42.51 4.34
360 361 6.540438 AAGAATATCCTTGGTAACGACTCA 57.460 37.500 0.00 0.00 42.51 3.41
366 367 3.576982 TCCTTGGTAACGACTCAACTCAT 59.423 43.478 0.00 0.00 42.51 2.90
368 369 5.103000 CCTTGGTAACGACTCAACTCATAG 58.897 45.833 0.00 0.00 42.51 2.23
379 380 6.745450 CGACTCAACTCATAGAAGAGAGAAAC 59.255 42.308 0.00 0.00 38.98 2.78
380 381 7.531857 ACTCAACTCATAGAAGAGAGAAACA 57.468 36.000 0.00 0.00 38.98 2.83
381 382 7.375053 ACTCAACTCATAGAAGAGAGAAACAC 58.625 38.462 0.00 0.00 38.98 3.32
382 383 7.014711 ACTCAACTCATAGAAGAGAGAAACACA 59.985 37.037 0.00 0.00 38.98 3.72
383 384 7.901029 TCAACTCATAGAAGAGAGAAACACAT 58.099 34.615 0.00 0.00 38.98 3.21
384 385 8.031864 TCAACTCATAGAAGAGAGAAACACATC 58.968 37.037 0.00 0.00 38.98 3.06
386 387 6.438741 ACTCATAGAAGAGAGAAACACATCCA 59.561 38.462 0.00 0.00 38.98 3.41
387 388 7.038729 ACTCATAGAAGAGAGAAACACATCCAA 60.039 37.037 0.00 0.00 38.98 3.53
388 389 7.326454 TCATAGAAGAGAGAAACACATCCAAG 58.674 38.462 0.00 0.00 0.00 3.61
389 390 4.322567 AGAAGAGAGAAACACATCCAAGC 58.677 43.478 0.00 0.00 0.00 4.01
390 391 3.777106 AGAGAGAAACACATCCAAGCA 57.223 42.857 0.00 0.00 0.00 3.91
409 410 3.406498 AGCAGGAGGTATTACCCCTAGAT 59.594 47.826 17.54 11.01 39.75 1.98
429 431 2.754254 GGGCATGGAACCGGGTTC 60.754 66.667 27.96 27.96 41.32 3.62
464 470 9.815936 AATACAATTTTAGTAAAAACGGTCGAG 57.184 29.630 11.92 0.41 37.41 4.04
470 476 7.712264 TTTAGTAAAAACGGTCGAGAAATCA 57.288 32.000 0.00 0.00 0.00 2.57
472 478 6.404712 AGTAAAAACGGTCGAGAAATCATC 57.595 37.500 0.00 0.00 0.00 2.92
474 480 3.328382 AAACGGTCGAGAAATCATCCA 57.672 42.857 0.00 0.00 0.00 3.41
475 481 3.543680 AACGGTCGAGAAATCATCCAT 57.456 42.857 0.00 0.00 0.00 3.41
477 483 3.873910 ACGGTCGAGAAATCATCCATTT 58.126 40.909 0.00 0.00 37.41 2.32
515 521 7.894708 TCTGAATTTTAATGGTCTTTGCATGA 58.105 30.769 0.00 0.00 0.00 3.07
521 527 7.579589 TTTAATGGTCTTTGCATGAATTTCG 57.420 32.000 0.00 0.00 0.00 3.46
526 532 4.161333 GTCTTTGCATGAATTTCGTCTGG 58.839 43.478 0.00 0.00 0.00 3.86
530 536 5.697473 TTGCATGAATTTCGTCTGGTTAA 57.303 34.783 0.00 0.00 0.00 2.01
545 551 9.226606 TCGTCTGGTTAATTCAAATAGTTGATT 57.773 29.630 6.42 0.23 43.29 2.57
561 567 6.052840 AGTTGATTAAATGTATGCGAGCAG 57.947 37.500 3.58 0.00 0.00 4.24
562 568 5.586243 AGTTGATTAAATGTATGCGAGCAGT 59.414 36.000 3.58 0.00 0.00 4.40
572 578 1.153958 GCGAGCAGTTTTGGATGGC 60.154 57.895 0.00 0.00 0.00 4.40
580 586 2.917897 TTTTGGATGGCCGGCTCCT 61.918 57.895 29.08 14.77 36.79 3.69
584 590 4.575973 GATGGCCGGCTCCTGCAT 62.576 66.667 28.56 20.54 41.91 3.96
585 591 4.133373 ATGGCCGGCTCCTGCATT 62.133 61.111 28.56 2.78 41.91 3.56
587 593 2.124320 GGCCGGCTCCTGCATTAA 60.124 61.111 28.56 0.00 41.91 1.40
591 597 0.947244 CCGGCTCCTGCATTAATGTC 59.053 55.000 16.61 9.60 41.91 3.06
593 599 0.947244 GGCTCCTGCATTAATGTCCG 59.053 55.000 16.61 5.96 41.91 4.79
594 600 1.668419 GCTCCTGCATTAATGTCCGT 58.332 50.000 16.61 0.00 39.41 4.69
596 602 2.905075 CTCCTGCATTAATGTCCGTGA 58.095 47.619 16.61 6.30 0.00 4.35
597 603 2.609459 CTCCTGCATTAATGTCCGTGAC 59.391 50.000 16.61 0.00 0.00 3.67
599 605 2.352651 CCTGCATTAATGTCCGTGACTG 59.647 50.000 16.61 2.85 33.15 3.51
600 606 3.261580 CTGCATTAATGTCCGTGACTGA 58.738 45.455 16.61 0.00 33.15 3.41
601 607 3.872696 TGCATTAATGTCCGTGACTGAT 58.127 40.909 16.61 0.00 33.15 2.90
603 609 4.332543 TGCATTAATGTCCGTGACTGATTC 59.667 41.667 16.61 0.00 33.15 2.52
604 610 4.260784 GCATTAATGTCCGTGACTGATTCC 60.261 45.833 16.61 0.00 33.15 3.01
605 611 4.819105 TTAATGTCCGTGACTGATTCCT 57.181 40.909 5.77 0.00 33.15 3.36
606 612 3.703001 AATGTCCGTGACTGATTCCTT 57.297 42.857 5.77 0.00 33.15 3.36
607 613 2.743636 TGTCCGTGACTGATTCCTTC 57.256 50.000 5.77 0.00 33.15 3.46
608 614 2.248248 TGTCCGTGACTGATTCCTTCT 58.752 47.619 5.77 0.00 33.15 2.85
609 615 2.029020 TGTCCGTGACTGATTCCTTCTG 60.029 50.000 5.77 0.00 33.15 3.02
610 616 2.028930 GTCCGTGACTGATTCCTTCTGT 60.029 50.000 0.00 0.00 39.03 3.41
612 618 2.611518 CGTGACTGATTCCTTCTGTCC 58.388 52.381 9.27 2.44 46.97 4.02
613 619 2.611518 GTGACTGATTCCTTCTGTCCG 58.388 52.381 9.27 0.00 46.97 4.79
614 620 1.066858 TGACTGATTCCTTCTGTCCGC 60.067 52.381 9.27 0.00 46.97 5.54
615 621 0.108615 ACTGATTCCTTCTGTCCGCG 60.109 55.000 0.00 0.00 31.46 6.46
616 622 0.807667 CTGATTCCTTCTGTCCGCGG 60.808 60.000 22.12 22.12 0.00 6.46
617 623 1.254975 TGATTCCTTCTGTCCGCGGA 61.255 55.000 27.28 27.28 0.00 5.54
636 642 3.189287 CGGAAGCATATTTATGGGTGAGC 59.811 47.826 0.10 0.00 34.32 4.26
641 647 3.304659 GCATATTTATGGGTGAGCGTTGG 60.305 47.826 0.10 0.00 34.32 3.77
643 649 2.107950 TTTATGGGTGAGCGTTGGAG 57.892 50.000 0.00 0.00 0.00 3.86
646 652 1.496060 ATGGGTGAGCGTTGGAGATA 58.504 50.000 0.00 0.00 0.00 1.98
654 660 3.709653 TGAGCGTTGGAGATACCCTAAAT 59.290 43.478 0.00 0.00 38.00 1.40
664 670 7.918076 TGGAGATACCCTAAATCCATAATGAC 58.082 38.462 0.00 0.00 35.16 3.06
710 716 0.951558 ATGGCATTTCCCGAATACGC 59.048 50.000 0.00 0.00 38.29 4.42
718 724 1.847818 TCCCGAATACGCGAGAATTG 58.152 50.000 15.93 0.00 38.29 2.32
796 802 7.088589 AGAATGTGTGCTTGTAATTATCCAC 57.911 36.000 0.00 0.00 0.00 4.02
808 814 6.110707 TGTAATTATCCACTTTCGAGGGTTC 58.889 40.000 0.00 0.00 0.00 3.62
810 816 4.467198 TTATCCACTTTCGAGGGTTCTC 57.533 45.455 0.00 0.00 36.69 2.87
848 854 8.880878 TTGGTTTACTCCAAAATAGAAAAAGC 57.119 30.769 0.00 0.00 43.40 3.51
928 956 3.157949 CCTCCCCGGAGAAGCCTC 61.158 72.222 12.54 0.00 44.53 4.70
1170 1198 3.155167 GCCGGACGATTCCTCCCT 61.155 66.667 5.05 0.00 40.23 4.20
1209 1237 1.629043 AGGAGAAAGGTGCGTACAGA 58.371 50.000 5.86 0.00 0.00 3.41
1210 1238 1.546476 AGGAGAAAGGTGCGTACAGAG 59.454 52.381 5.86 0.00 0.00 3.35
1211 1239 1.351153 GAGAAAGGTGCGTACAGAGC 58.649 55.000 5.86 0.00 0.00 4.09
1212 1240 0.037232 AGAAAGGTGCGTACAGAGCC 60.037 55.000 5.86 0.00 0.00 4.70
1269 1297 7.855409 GCAATCGCATGATACTGTTGTAAATTA 59.145 33.333 0.00 0.00 38.36 1.40
1379 1554 4.113815 TGGGGGAATCTGCGGCTG 62.114 66.667 0.00 0.00 0.00 4.85
1410 1585 3.983741 TGGTTGGGCTAATTTTGTTTCG 58.016 40.909 0.00 0.00 0.00 3.46
1416 1591 3.504520 GGGCTAATTTTGTTTCGACAGGA 59.495 43.478 0.00 0.00 0.00 3.86
1436 1611 5.884792 CAGGAGATTCATAAGTTTTGAGCCT 59.115 40.000 0.00 1.24 0.00 4.58
1468 1643 5.229423 TGGTGCAAAGCTTTATTCACAATC 58.771 37.500 25.95 16.23 0.00 2.67
1599 1778 9.546428 CTGTCTGAATAACCATGATACATGTTA 57.454 33.333 2.30 9.01 0.00 2.41
1600 1779 9.898152 TGTCTGAATAACCATGATACATGTTAA 57.102 29.630 2.30 0.00 0.00 2.01
1628 1807 5.713025 TCAAAGCACTAATCTGCCATTTTC 58.287 37.500 0.00 0.00 37.96 2.29
1644 1823 6.016276 TGCCATTTTCTTTCTTAGTTCACCTC 60.016 38.462 0.00 0.00 0.00 3.85
1647 1826 8.293157 CCATTTTCTTTCTTAGTTCACCTCTTC 58.707 37.037 0.00 0.00 0.00 2.87
1650 1829 8.438676 TTTCTTTCTTAGTTCACCTCTTCTTG 57.561 34.615 0.00 0.00 0.00 3.02
1651 1830 7.125792 TCTTTCTTAGTTCACCTCTTCTTGT 57.874 36.000 0.00 0.00 0.00 3.16
1652 1831 6.986817 TCTTTCTTAGTTCACCTCTTCTTGTG 59.013 38.462 0.00 0.00 0.00 3.33
1653 1832 5.871396 TCTTAGTTCACCTCTTCTTGTGT 57.129 39.130 0.00 0.00 34.14 3.72
1654 1833 5.601662 TCTTAGTTCACCTCTTCTTGTGTG 58.398 41.667 0.00 0.00 34.14 3.82
1655 1834 3.914426 AGTTCACCTCTTCTTGTGTGT 57.086 42.857 0.00 0.00 34.14 3.72
1656 1835 3.535561 AGTTCACCTCTTCTTGTGTGTG 58.464 45.455 0.00 0.00 34.14 3.82
1657 1836 3.055094 AGTTCACCTCTTCTTGTGTGTGT 60.055 43.478 0.00 0.00 34.14 3.72
1658 1837 2.905075 TCACCTCTTCTTGTGTGTGTG 58.095 47.619 0.00 0.00 34.14 3.82
1659 1838 2.236146 TCACCTCTTCTTGTGTGTGTGT 59.764 45.455 0.00 0.00 34.14 3.72
1660 1839 2.352651 CACCTCTTCTTGTGTGTGTGTG 59.647 50.000 0.00 0.00 0.00 3.82
1666 1845 1.803555 TCTTGTGTGTGTGTGTGTGTG 59.196 47.619 0.00 0.00 0.00 3.82
1682 1861 5.511377 GTGTGTGTGTGTGTTGAAACATTAG 59.489 40.000 0.00 0.00 41.59 1.73
1683 1862 5.034152 GTGTGTGTGTGTTGAAACATTAGG 58.966 41.667 0.00 0.00 41.59 2.69
1693 1872 9.132923 TGTGTTGAAACATTAGGGTTATTGTAA 57.867 29.630 0.00 0.00 41.59 2.41
1819 2000 4.096003 CCACCATCCTCGCCGGTT 62.096 66.667 1.90 0.00 0.00 4.44
1820 2001 2.819595 CACCATCCTCGCCGGTTG 60.820 66.667 1.90 0.00 33.13 3.77
1832 2033 2.513897 CGGTTGAGCGAATCCCCC 60.514 66.667 0.00 0.00 0.00 5.40
1849 2050 2.722201 CCGGTAGGTCTCCAGCACC 61.722 68.421 0.00 0.00 0.00 5.01
1860 2061 3.190849 CAGCACCGCACCTCATCG 61.191 66.667 0.00 0.00 0.00 3.84
1922 2123 2.486796 GGTACGTCCCGAAGTAGCT 58.513 57.895 11.22 0.00 39.49 3.32
1943 2144 1.312371 ATTTGCGGGGGACATTGACG 61.312 55.000 0.00 0.00 0.00 4.35
1948 2149 4.090588 GGGGACATTGACGCGGGA 62.091 66.667 12.47 0.00 0.00 5.14
1956 2157 1.389609 ATTGACGCGGGATAGACGGT 61.390 55.000 12.47 0.00 0.00 4.83
2055 2256 3.124560 GGTGATAAGGAAAGAGTAGCGC 58.875 50.000 0.00 0.00 0.00 5.92
2065 2266 3.550437 AAGAGTAGCGCTGGAATGAAT 57.450 42.857 22.90 0.00 0.00 2.57
2095 2297 4.935885 GCACTTCTGTGACAGGATAAAG 57.064 45.455 13.33 11.05 46.55 1.85
2117 2319 1.226030 GAGTTAAGCGGTGGTGCGTT 61.226 55.000 0.00 0.00 40.67 4.84
2179 2381 1.335324 CGGTCGACCAGTTCTAAACGT 60.335 52.381 32.80 0.00 36.23 3.99
2232 2434 9.230122 TGAAGACTAATTAAATGAATCTGCACA 57.770 29.630 0.00 0.00 0.00 4.57
2292 2494 6.654161 GTCTAGTTGTTCTACTCTGTACCTCA 59.346 42.308 0.00 0.00 0.00 3.86
2328 2530 9.393512 CTCATGTTTCTCCTTTATTTCTCTGAT 57.606 33.333 0.00 0.00 0.00 2.90
2396 2598 3.149899 AGCGATTCTTGCTGTGAGG 57.850 52.632 0.00 0.00 42.14 3.86
2541 2743 3.901222 TCAGACACATCCAACACTTAGGA 59.099 43.478 0.00 0.00 38.50 2.94
2618 2820 7.038154 TGTATTCTAATTTGCTATTGTGGGC 57.962 36.000 0.00 0.00 0.00 5.36
2619 2821 5.535753 ATTCTAATTTGCTATTGTGGGCC 57.464 39.130 0.00 0.00 0.00 5.80
2620 2822 4.249638 TCTAATTTGCTATTGTGGGCCT 57.750 40.909 4.53 0.00 0.00 5.19
2647 2849 6.707161 GTGGCCGTGTTACCATTTCTATATTA 59.293 38.462 0.00 0.00 38.46 0.98
2648 2850 7.389607 GTGGCCGTGTTACCATTTCTATATTAT 59.610 37.037 0.00 0.00 38.46 1.28
2649 2851 7.940137 TGGCCGTGTTACCATTTCTATATTATT 59.060 33.333 0.00 0.00 0.00 1.40
2650 2852 8.789762 GGCCGTGTTACCATTTCTATATTATTT 58.210 33.333 0.00 0.00 0.00 1.40
3138 3344 0.181114 GTGCCTAGATCACCCATGCA 59.819 55.000 0.00 0.00 0.00 3.96
3262 3468 6.351033 GGATGGAACCACCTTTTATTTCCTTC 60.351 42.308 0.00 0.00 38.71 3.46
3337 3552 5.635120 AGGCTTGGTTTCTCTTATTTCAGT 58.365 37.500 0.00 0.00 0.00 3.41
3431 3647 9.911788 ATGTGGAATGTGAAGATTACTTATTCT 57.088 29.630 0.00 0.00 36.39 2.40
3445 3661 7.928307 TTACTTATTCTTGCTCTTGCTCAAT 57.072 32.000 0.00 0.00 40.48 2.57
3595 3813 2.862536 CGACATAGACCATGAGCAAGTG 59.137 50.000 0.00 0.00 38.10 3.16
3807 4033 1.192146 TCCCAACTCTTCCCGTCAGG 61.192 60.000 0.00 0.00 37.24 3.86
3820 4046 4.286707 TCCCGTCAGGAAAGATATTCTCA 58.713 43.478 0.00 0.00 43.78 3.27
4018 4244 8.564574 CAGTTTGTAAGCAAGTTAAATGGTAGA 58.435 33.333 0.00 0.00 35.82 2.59
4178 4407 4.492570 CGGAACTGCAAACGTGATATCTTC 60.493 45.833 3.98 0.00 0.00 2.87
4254 4487 4.996434 GCGCCGGGATGATCTGGG 62.996 72.222 2.18 2.91 33.82 4.45
4255 4488 3.233980 CGCCGGGATGATCTGGGA 61.234 66.667 2.18 0.00 33.82 4.37
4256 4489 2.746359 GCCGGGATGATCTGGGAG 59.254 66.667 2.18 0.00 33.82 4.30
4257 4490 2.888447 GCCGGGATGATCTGGGAGG 61.888 68.421 2.18 0.00 33.82 4.30
4258 4491 1.460305 CCGGGATGATCTGGGAGGT 60.460 63.158 0.00 0.00 0.00 3.85
4259 4492 1.476007 CCGGGATGATCTGGGAGGTC 61.476 65.000 0.00 0.00 0.00 3.85
4260 4493 1.476007 CGGGATGATCTGGGAGGTCC 61.476 65.000 0.00 0.00 0.00 4.46
4270 4503 3.681473 GGAGGTCCCGCCAAAAAG 58.319 61.111 0.69 0.00 40.61 2.27
4271 4504 1.074248 GGAGGTCCCGCCAAAAAGA 59.926 57.895 0.69 0.00 40.61 2.52
4272 4505 0.960861 GGAGGTCCCGCCAAAAAGAG 60.961 60.000 0.69 0.00 40.61 2.85
4273 4506 0.960861 GAGGTCCCGCCAAAAAGAGG 60.961 60.000 0.00 0.00 40.61 3.69
4274 4507 1.977009 GGTCCCGCCAAAAAGAGGG 60.977 63.158 0.00 0.00 45.10 4.30
4280 4513 2.641197 GCCAAAAAGAGGGCGAGAA 58.359 52.632 0.00 0.00 40.93 2.87
4293 4526 1.829349 GCGAGAAGATCATGGCGCAG 61.829 60.000 10.83 0.00 43.45 5.18
4333 4571 0.111061 TGCCTTCCAGATGTGTTGCT 59.889 50.000 0.00 0.00 0.00 3.91
4357 4595 1.168714 GATGGCCCTGTTCTTGTCAC 58.831 55.000 0.00 0.00 0.00 3.67
4387 4625 1.600023 TTGCTTGTTGGTACCTTCCG 58.400 50.000 14.36 0.00 0.00 4.30
4390 4628 1.265905 GCTTGTTGGTACCTTCCGTTG 59.734 52.381 14.36 0.00 0.00 4.10
4426 4664 1.587054 CTCTGTCCCTGACACCGAC 59.413 63.158 0.00 0.00 37.67 4.79
4428 4666 1.290324 CTGTCCCTGACACCGACAG 59.710 63.158 11.06 11.06 45.33 3.51
4464 4702 0.669625 GCTGGGAGCGTTTTCGTAGT 60.670 55.000 0.00 0.00 46.03 2.73
4471 4709 3.121092 GGAGCGTTTTCGTAGTCTGTTTC 60.121 47.826 0.00 0.00 46.03 2.78
4477 4715 5.220529 CGTTTTCGTAGTCTGTTTCCTGTTT 60.221 40.000 0.00 0.00 38.65 2.83
4488 4726 5.245075 TCTGTTTCCTGTTTCTGTTGGTTTT 59.755 36.000 0.00 0.00 0.00 2.43
4491 4729 5.730296 TTCCTGTTTCTGTTGGTTTTGAA 57.270 34.783 0.00 0.00 0.00 2.69
4494 4732 4.159506 CCTGTTTCTGTTGGTTTTGAAGGA 59.840 41.667 0.00 0.00 0.00 3.36
4519 4757 4.449131 AGGTTTAAATACCTAGCGCTTCC 58.551 43.478 18.68 0.00 46.65 3.46
4520 4758 4.163649 AGGTTTAAATACCTAGCGCTTCCT 59.836 41.667 18.68 0.00 46.65 3.36
4521 4759 5.364735 AGGTTTAAATACCTAGCGCTTCCTA 59.635 40.000 18.68 2.22 46.65 2.94
4522 4760 6.042897 AGGTTTAAATACCTAGCGCTTCCTAT 59.957 38.462 18.68 4.84 46.65 2.57
4523 4761 6.368243 GGTTTAAATACCTAGCGCTTCCTATC 59.632 42.308 18.68 0.00 35.23 2.08
4524 4762 6.659745 TTAAATACCTAGCGCTTCCTATCA 57.340 37.500 18.68 0.00 0.00 2.15
4525 4763 5.546621 AAATACCTAGCGCTTCCTATCAA 57.453 39.130 18.68 0.00 0.00 2.57
4526 4764 5.746990 AATACCTAGCGCTTCCTATCAAT 57.253 39.130 18.68 0.00 0.00 2.57
4527 4765 6.852420 AATACCTAGCGCTTCCTATCAATA 57.148 37.500 18.68 0.00 0.00 1.90
4528 4766 4.792521 ACCTAGCGCTTCCTATCAATAG 57.207 45.455 18.68 1.64 0.00 1.73
4529 4767 4.408276 ACCTAGCGCTTCCTATCAATAGA 58.592 43.478 18.68 0.00 32.05 1.98
4530 4768 4.833380 ACCTAGCGCTTCCTATCAATAGAA 59.167 41.667 18.68 0.00 32.05 2.10
4531 4769 5.304614 ACCTAGCGCTTCCTATCAATAGAAA 59.695 40.000 18.68 0.00 32.05 2.52
4532 4770 6.014156 ACCTAGCGCTTCCTATCAATAGAAAT 60.014 38.462 18.68 0.00 32.05 2.17
4533 4771 7.178628 ACCTAGCGCTTCCTATCAATAGAAATA 59.821 37.037 18.68 0.00 32.05 1.40
4534 4772 8.200792 CCTAGCGCTTCCTATCAATAGAAATAT 58.799 37.037 18.68 0.00 32.05 1.28
4535 4773 7.840342 AGCGCTTCCTATCAATAGAAATATG 57.160 36.000 2.64 0.00 32.05 1.78
4536 4774 7.390027 AGCGCTTCCTATCAATAGAAATATGT 58.610 34.615 2.64 0.00 32.05 2.29
4537 4775 8.531982 AGCGCTTCCTATCAATAGAAATATGTA 58.468 33.333 2.64 0.00 32.05 2.29
4538 4776 9.319143 GCGCTTCCTATCAATAGAAATATGTAT 57.681 33.333 0.00 0.00 32.05 2.29
4558 4796 8.792830 ATGTATATATGCGCTCTAATTTTGGT 57.207 30.769 9.73 0.00 0.00 3.67
4559 4797 8.615878 TGTATATATGCGCTCTAATTTTGGTT 57.384 30.769 9.73 0.00 0.00 3.67
4560 4798 8.717821 TGTATATATGCGCTCTAATTTTGGTTC 58.282 33.333 9.73 0.00 0.00 3.62
4561 4799 7.986085 ATATATGCGCTCTAATTTTGGTTCT 57.014 32.000 9.73 0.00 0.00 3.01
4562 4800 6.699575 ATATGCGCTCTAATTTTGGTTCTT 57.300 33.333 9.73 0.00 0.00 2.52
4563 4801 4.846779 TGCGCTCTAATTTTGGTTCTTT 57.153 36.364 9.73 0.00 0.00 2.52
4564 4802 4.545610 TGCGCTCTAATTTTGGTTCTTTG 58.454 39.130 9.73 0.00 0.00 2.77
4565 4803 3.364920 GCGCTCTAATTTTGGTTCTTTGC 59.635 43.478 0.00 0.00 0.00 3.68
4566 4804 4.798574 CGCTCTAATTTTGGTTCTTTGCT 58.201 39.130 0.00 0.00 0.00 3.91
4567 4805 5.222631 CGCTCTAATTTTGGTTCTTTGCTT 58.777 37.500 0.00 0.00 0.00 3.91
4568 4806 6.378582 CGCTCTAATTTTGGTTCTTTGCTTA 58.621 36.000 0.00 0.00 0.00 3.09
4569 4807 6.524586 CGCTCTAATTTTGGTTCTTTGCTTAG 59.475 38.462 0.00 0.00 0.00 2.18
4570 4808 7.573096 CGCTCTAATTTTGGTTCTTTGCTTAGA 60.573 37.037 0.00 0.00 0.00 2.10
4571 4809 7.752686 GCTCTAATTTTGGTTCTTTGCTTAGAG 59.247 37.037 10.25 10.25 41.60 2.43
4572 4810 8.110860 TCTAATTTTGGTTCTTTGCTTAGAGG 57.889 34.615 0.00 0.00 0.00 3.69
4573 4811 6.731292 AATTTTGGTTCTTTGCTTAGAGGT 57.269 33.333 0.00 0.00 0.00 3.85
4574 4812 7.833285 AATTTTGGTTCTTTGCTTAGAGGTA 57.167 32.000 0.00 0.00 0.00 3.08
4575 4813 6.628919 TTTTGGTTCTTTGCTTAGAGGTAC 57.371 37.500 0.00 0.00 0.00 3.34
4590 4828 2.320781 AGGTACTCTGTGCTTGTCTGT 58.679 47.619 0.00 0.00 0.00 3.41
4591 4829 3.497332 AGGTACTCTGTGCTTGTCTGTA 58.503 45.455 0.00 0.00 0.00 2.74
4592 4830 4.090090 AGGTACTCTGTGCTTGTCTGTAT 58.910 43.478 0.00 0.00 0.00 2.29
4593 4831 4.528596 AGGTACTCTGTGCTTGTCTGTATT 59.471 41.667 0.00 0.00 0.00 1.89
4594 4832 5.715279 AGGTACTCTGTGCTTGTCTGTATTA 59.285 40.000 0.00 0.00 0.00 0.98
4595 4833 6.210784 AGGTACTCTGTGCTTGTCTGTATTAA 59.789 38.462 0.00 0.00 0.00 1.40
4596 4834 6.310711 GGTACTCTGTGCTTGTCTGTATTAAC 59.689 42.308 0.00 0.00 0.00 2.01
4597 4835 5.853936 ACTCTGTGCTTGTCTGTATTAACA 58.146 37.500 0.00 0.00 0.00 2.41
4598 4836 6.467677 ACTCTGTGCTTGTCTGTATTAACAT 58.532 36.000 0.00 0.00 34.37 2.71
4599 4837 6.369890 ACTCTGTGCTTGTCTGTATTAACATG 59.630 38.462 0.00 0.00 34.37 3.21
4600 4838 5.643348 TCTGTGCTTGTCTGTATTAACATGG 59.357 40.000 0.00 0.00 34.37 3.66
4601 4839 5.555966 TGTGCTTGTCTGTATTAACATGGA 58.444 37.500 0.00 0.00 34.37 3.41
4602 4840 6.000840 TGTGCTTGTCTGTATTAACATGGAA 58.999 36.000 0.00 0.00 34.37 3.53
4603 4841 6.488344 TGTGCTTGTCTGTATTAACATGGAAA 59.512 34.615 0.00 0.00 34.37 3.13
4604 4842 7.176515 TGTGCTTGTCTGTATTAACATGGAAAT 59.823 33.333 0.00 0.00 34.37 2.17
4605 4843 8.673711 GTGCTTGTCTGTATTAACATGGAAATA 58.326 33.333 0.00 0.00 34.37 1.40
4606 4844 9.237187 TGCTTGTCTGTATTAACATGGAAATAA 57.763 29.630 0.00 0.00 34.37 1.40
4610 4848 9.461312 TGTCTGTATTAACATGGAAATAAAGCT 57.539 29.630 11.82 0.00 34.37 3.74
4626 4864 9.696917 GAAATAAAGCTTTTCCATTGAGAAGAA 57.303 29.630 18.47 0.00 35.29 2.52
4630 4868 8.599055 AAAGCTTTTCCATTGAGAAGAAATTC 57.401 30.769 5.69 0.00 35.29 2.17
4631 4869 7.536159 AGCTTTTCCATTGAGAAGAAATTCT 57.464 32.000 1.61 0.00 35.29 2.40
4632 4870 7.376615 AGCTTTTCCATTGAGAAGAAATTCTG 58.623 34.615 0.00 0.00 35.29 3.02
4633 4871 6.589139 GCTTTTCCATTGAGAAGAAATTCTGG 59.411 38.462 0.00 0.00 35.29 3.86
4634 4872 5.649782 TTCCATTGAGAAGAAATTCTGGC 57.350 39.130 0.00 0.00 0.00 4.85
4635 4873 4.665451 TCCATTGAGAAGAAATTCTGGCA 58.335 39.130 0.00 0.00 0.00 4.92
4636 4874 5.078949 TCCATTGAGAAGAAATTCTGGCAA 58.921 37.500 0.00 2.35 0.00 4.52
4637 4875 5.718130 TCCATTGAGAAGAAATTCTGGCAAT 59.282 36.000 0.00 4.58 0.00 3.56
4638 4876 6.211986 TCCATTGAGAAGAAATTCTGGCAATT 59.788 34.615 12.44 0.00 0.00 2.32
4639 4877 6.534079 CCATTGAGAAGAAATTCTGGCAATTC 59.466 38.462 12.44 0.38 0.00 2.17
4640 4878 6.906157 TTGAGAAGAAATTCTGGCAATTCT 57.094 33.333 0.00 0.00 33.73 2.40
4641 4879 6.906157 TGAGAAGAAATTCTGGCAATTCTT 57.094 33.333 13.63 13.63 42.95 2.52
4647 4885 8.599055 AAGAAATTCTGGCAATTCTTCTTTTC 57.401 30.769 0.00 0.00 37.52 2.29
4648 4886 7.157347 AGAAATTCTGGCAATTCTTCTTTTCC 58.843 34.615 0.00 0.00 0.00 3.13
4649 4887 6.676990 AATTCTGGCAATTCTTCTTTTCCT 57.323 33.333 0.00 0.00 0.00 3.36
4650 4888 5.712152 TTCTGGCAATTCTTCTTTTCCTC 57.288 39.130 0.00 0.00 0.00 3.71
4651 4889 4.990526 TCTGGCAATTCTTCTTTTCCTCT 58.009 39.130 0.00 0.00 0.00 3.69
4652 4890 6.126863 TCTGGCAATTCTTCTTTTCCTCTA 57.873 37.500 0.00 0.00 0.00 2.43
5054 5292 9.869757 AAATATAAGTTACAAACAGGATTTGGC 57.130 29.630 4.55 0.00 33.92 4.52
5055 5293 3.915437 AGTTACAAACAGGATTTGGCG 57.085 42.857 4.55 0.00 33.92 5.69
5056 5294 3.482436 AGTTACAAACAGGATTTGGCGA 58.518 40.909 4.55 0.00 33.92 5.54
5057 5295 4.079253 AGTTACAAACAGGATTTGGCGAT 58.921 39.130 4.55 0.00 33.92 4.58
5058 5296 4.156008 AGTTACAAACAGGATTTGGCGATC 59.844 41.667 4.55 0.00 33.92 3.69
5059 5297 1.818674 ACAAACAGGATTTGGCGATCC 59.181 47.619 10.75 10.75 44.91 3.36
5066 5304 3.692791 GGATTTGGCGATCCTTAACAC 57.307 47.619 11.30 0.00 41.96 3.32
5067 5305 3.013921 GGATTTGGCGATCCTTAACACA 58.986 45.455 11.30 0.00 41.96 3.72
5068 5306 3.632145 GGATTTGGCGATCCTTAACACAT 59.368 43.478 11.30 0.00 41.96 3.21
5069 5307 4.819630 GGATTTGGCGATCCTTAACACATA 59.180 41.667 11.30 0.00 41.96 2.29
5070 5308 5.298276 GGATTTGGCGATCCTTAACACATAA 59.702 40.000 11.30 0.00 41.96 1.90
5071 5309 5.811399 TTTGGCGATCCTTAACACATAAG 57.189 39.130 0.00 0.00 40.67 1.73
5072 5310 4.481368 TGGCGATCCTTAACACATAAGT 57.519 40.909 0.00 0.00 39.56 2.24
5073 5311 4.839121 TGGCGATCCTTAACACATAAGTT 58.161 39.130 0.00 0.00 39.56 2.66
5074 5312 4.634004 TGGCGATCCTTAACACATAAGTTG 59.366 41.667 0.00 0.00 39.56 3.16
5075 5313 4.495844 GGCGATCCTTAACACATAAGTTGC 60.496 45.833 0.00 0.00 39.56 4.17
5076 5314 4.495844 GCGATCCTTAACACATAAGTTGCC 60.496 45.833 0.00 0.00 39.56 4.52
5077 5315 4.876107 CGATCCTTAACACATAAGTTGCCT 59.124 41.667 0.00 0.00 39.56 4.75
5078 5316 6.046593 CGATCCTTAACACATAAGTTGCCTA 58.953 40.000 0.00 0.00 39.56 3.93
5079 5317 6.201044 CGATCCTTAACACATAAGTTGCCTAG 59.799 42.308 0.00 0.00 39.56 3.02
5080 5318 6.368779 TCCTTAACACATAAGTTGCCTAGT 57.631 37.500 0.00 0.00 39.56 2.57
5081 5319 6.775708 TCCTTAACACATAAGTTGCCTAGTT 58.224 36.000 0.00 0.00 39.56 2.24
5082 5320 7.228590 TCCTTAACACATAAGTTGCCTAGTTT 58.771 34.615 0.00 0.00 39.56 2.66
5083 5321 7.722285 TCCTTAACACATAAGTTGCCTAGTTTT 59.278 33.333 0.00 0.00 39.56 2.43
5084 5322 7.807907 CCTTAACACATAAGTTGCCTAGTTTTG 59.192 37.037 0.00 0.00 39.56 2.44
5085 5323 5.121221 ACACATAAGTTGCCTAGTTTTGC 57.879 39.130 0.00 0.00 0.00 3.68
5086 5324 4.582656 ACACATAAGTTGCCTAGTTTTGCA 59.417 37.500 0.00 0.00 35.27 4.08
5087 5325 5.068460 ACACATAAGTTGCCTAGTTTTGCAA 59.932 36.000 0.00 0.00 44.64 4.08
5091 5329 1.703411 TTGCCTAGTTTTGCAAGCCT 58.297 45.000 0.00 2.09 42.19 4.58
5092 5330 2.577606 TGCCTAGTTTTGCAAGCCTA 57.422 45.000 0.00 3.23 33.87 3.93
5093 5331 2.436417 TGCCTAGTTTTGCAAGCCTAG 58.564 47.619 19.83 19.83 33.87 3.02
5094 5332 1.133216 GCCTAGTTTTGCAAGCCTAGC 59.867 52.381 20.75 15.17 0.00 3.42
5095 5333 2.436417 CCTAGTTTTGCAAGCCTAGCA 58.564 47.619 20.75 0.00 40.85 3.49
5096 5334 2.162408 CCTAGTTTTGCAAGCCTAGCAC 59.838 50.000 20.75 4.75 42.54 4.40
5097 5335 1.691196 AGTTTTGCAAGCCTAGCACA 58.309 45.000 0.00 0.00 42.54 4.57
5098 5336 1.610522 AGTTTTGCAAGCCTAGCACAG 59.389 47.619 0.00 0.00 42.54 3.66
5099 5337 1.338020 GTTTTGCAAGCCTAGCACAGT 59.662 47.619 0.00 0.00 42.54 3.55
5100 5338 0.953727 TTTGCAAGCCTAGCACAGTG 59.046 50.000 0.00 0.00 42.54 3.66
5101 5339 0.108396 TTGCAAGCCTAGCACAGTGA 59.892 50.000 4.15 0.00 42.54 3.41
5102 5340 0.325933 TGCAAGCCTAGCACAGTGAT 59.674 50.000 4.15 0.00 37.02 3.06
5103 5341 1.012841 GCAAGCCTAGCACAGTGATC 58.987 55.000 4.15 0.00 0.00 2.92
5104 5342 1.406614 GCAAGCCTAGCACAGTGATCT 60.407 52.381 4.15 0.00 0.00 2.75
5105 5343 2.548875 CAAGCCTAGCACAGTGATCTC 58.451 52.381 4.15 0.00 0.00 2.75
5106 5344 1.118838 AGCCTAGCACAGTGATCTCC 58.881 55.000 4.15 0.00 0.00 3.71
5107 5345 1.118838 GCCTAGCACAGTGATCTCCT 58.881 55.000 4.15 0.00 0.00 3.69
5108 5346 1.202510 GCCTAGCACAGTGATCTCCTG 60.203 57.143 4.15 10.32 36.01 3.86
5109 5347 2.106566 CCTAGCACAGTGATCTCCTGT 58.893 52.381 4.15 11.40 43.76 4.00
5110 5348 2.499289 CCTAGCACAGTGATCTCCTGTT 59.501 50.000 13.74 5.94 41.10 3.16
5111 5349 2.758736 AGCACAGTGATCTCCTGTTC 57.241 50.000 13.74 10.44 41.10 3.18
5112 5350 1.277557 AGCACAGTGATCTCCTGTTCC 59.722 52.381 13.74 9.36 41.10 3.62
5113 5351 1.277557 GCACAGTGATCTCCTGTTCCT 59.722 52.381 13.74 0.00 41.10 3.36
5114 5352 2.934364 GCACAGTGATCTCCTGTTCCTG 60.934 54.545 13.74 6.46 41.10 3.86
5115 5353 2.301296 CACAGTGATCTCCTGTTCCTGT 59.699 50.000 13.74 0.00 41.10 4.00
5116 5354 3.511540 CACAGTGATCTCCTGTTCCTGTA 59.488 47.826 13.74 0.00 41.10 2.74
5117 5355 4.161189 CACAGTGATCTCCTGTTCCTGTAT 59.839 45.833 13.74 0.00 41.10 2.29
5118 5356 4.161189 ACAGTGATCTCCTGTTCCTGTATG 59.839 45.833 11.40 0.00 40.14 2.39
5119 5357 3.133721 AGTGATCTCCTGTTCCTGTATGC 59.866 47.826 0.00 0.00 0.00 3.14
5120 5358 3.133721 GTGATCTCCTGTTCCTGTATGCT 59.866 47.826 0.00 0.00 0.00 3.79
5121 5359 3.133542 TGATCTCCTGTTCCTGTATGCTG 59.866 47.826 0.00 0.00 0.00 4.41
5122 5360 2.540383 TCTCCTGTTCCTGTATGCTGT 58.460 47.619 0.00 0.00 0.00 4.40
5123 5361 3.708451 TCTCCTGTTCCTGTATGCTGTA 58.292 45.455 0.00 0.00 0.00 2.74
5124 5362 3.447586 TCTCCTGTTCCTGTATGCTGTAC 59.552 47.826 0.00 0.00 0.00 2.90
5125 5363 3.169908 TCCTGTTCCTGTATGCTGTACA 58.830 45.455 0.00 0.00 0.00 2.90
5126 5364 3.056107 TCCTGTTCCTGTATGCTGTACAC 60.056 47.826 0.00 0.00 0.00 2.90
5127 5365 3.055819 CCTGTTCCTGTATGCTGTACACT 60.056 47.826 0.00 0.00 0.00 3.55
5128 5366 4.159693 CCTGTTCCTGTATGCTGTACACTA 59.840 45.833 0.00 0.00 0.00 2.74
5129 5367 5.068234 TGTTCCTGTATGCTGTACACTAC 57.932 43.478 0.00 0.00 0.00 2.73
5130 5368 4.770531 TGTTCCTGTATGCTGTACACTACT 59.229 41.667 0.00 0.00 0.00 2.57
5131 5369 5.947566 TGTTCCTGTATGCTGTACACTACTA 59.052 40.000 0.00 0.00 0.00 1.82
5132 5370 6.605995 TGTTCCTGTATGCTGTACACTACTAT 59.394 38.462 0.00 0.00 0.00 2.12
5133 5371 7.776500 TGTTCCTGTATGCTGTACACTACTATA 59.224 37.037 0.00 0.00 0.00 1.31
5134 5372 8.627403 GTTCCTGTATGCTGTACACTACTATAA 58.373 37.037 0.00 0.00 0.00 0.98
5135 5373 8.162878 TCCTGTATGCTGTACACTACTATAAC 57.837 38.462 0.00 0.00 0.00 1.89
5136 5374 7.776500 TCCTGTATGCTGTACACTACTATAACA 59.224 37.037 0.00 0.00 0.00 2.41
5137 5375 8.410912 CCTGTATGCTGTACACTACTATAACAA 58.589 37.037 0.00 0.00 0.00 2.83
5138 5376 9.452065 CTGTATGCTGTACACTACTATAACAAG 57.548 37.037 0.00 0.00 0.00 3.16
5139 5377 7.919091 TGTATGCTGTACACTACTATAACAAGC 59.081 37.037 0.00 0.00 0.00 4.01
5140 5378 5.657474 TGCTGTACACTACTATAACAAGCC 58.343 41.667 0.00 0.00 0.00 4.35
5141 5379 5.186215 TGCTGTACACTACTATAACAAGCCA 59.814 40.000 0.00 0.00 0.00 4.75
5142 5380 6.127168 TGCTGTACACTACTATAACAAGCCAT 60.127 38.462 0.00 0.00 0.00 4.40
5143 5381 6.761714 GCTGTACACTACTATAACAAGCCATT 59.238 38.462 0.00 0.00 0.00 3.16
5144 5382 7.280205 GCTGTACACTACTATAACAAGCCATTT 59.720 37.037 0.00 0.00 0.00 2.32
5145 5383 9.162764 CTGTACACTACTATAACAAGCCATTTT 57.837 33.333 0.00 0.00 0.00 1.82
5146 5384 9.509956 TGTACACTACTATAACAAGCCATTTTT 57.490 29.630 0.00 0.00 0.00 1.94
5168 5406 7.798596 TTTTGGCTCAGAAGATTATCATCTC 57.201 36.000 0.00 0.00 39.00 2.75
5169 5407 6.744175 TTGGCTCAGAAGATTATCATCTCT 57.256 37.500 0.00 0.00 39.00 3.10
5170 5408 6.099159 TGGCTCAGAAGATTATCATCTCTG 57.901 41.667 10.69 10.69 39.00 3.35
5171 5409 5.601729 TGGCTCAGAAGATTATCATCTCTGT 59.398 40.000 14.33 0.00 39.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.811616 GCAAGATGGCGAGGTAGTGG 60.812 60.000 0.00 0.00 0.00 4.00
3 4 0.176680 AGCAAGATGGCGAGGTAGTG 59.823 55.000 0.00 0.00 39.27 2.74
4 5 0.176680 CAGCAAGATGGCGAGGTAGT 59.823 55.000 0.00 0.00 39.27 2.73
8 9 0.883814 GATCCAGCAAGATGGCGAGG 60.884 60.000 0.00 0.00 40.41 4.63
9 10 0.179065 TGATCCAGCAAGATGGCGAG 60.179 55.000 0.00 0.00 40.41 5.03
10 11 0.252761 TTGATCCAGCAAGATGGCGA 59.747 50.000 0.00 0.00 40.41 5.54
11 12 0.661552 CTTGATCCAGCAAGATGGCG 59.338 55.000 0.00 0.00 46.31 5.69
12 13 2.048444 TCTTGATCCAGCAAGATGGC 57.952 50.000 3.12 0.00 46.73 4.40
17 18 0.731417 CGCCTTCTTGATCCAGCAAG 59.269 55.000 0.00 0.00 45.10 4.01
18 19 0.036732 ACGCCTTCTTGATCCAGCAA 59.963 50.000 0.00 0.00 0.00 3.91
19 20 0.674581 CACGCCTTCTTGATCCAGCA 60.675 55.000 0.00 0.00 0.00 4.41
20 21 1.372087 CCACGCCTTCTTGATCCAGC 61.372 60.000 0.00 0.00 0.00 4.85
21 22 0.250234 TCCACGCCTTCTTGATCCAG 59.750 55.000 0.00 0.00 0.00 3.86
22 23 0.036388 GTCCACGCCTTCTTGATCCA 60.036 55.000 0.00 0.00 0.00 3.41
23 24 1.084370 CGTCCACGCCTTCTTGATCC 61.084 60.000 0.00 0.00 0.00 3.36
24 25 0.389948 ACGTCCACGCCTTCTTGATC 60.390 55.000 0.00 0.00 44.43 2.92
25 26 0.389948 GACGTCCACGCCTTCTTGAT 60.390 55.000 3.51 0.00 44.43 2.57
26 27 1.006571 GACGTCCACGCCTTCTTGA 60.007 57.895 3.51 0.00 44.43 3.02
27 28 1.300620 TGACGTCCACGCCTTCTTG 60.301 57.895 14.12 0.00 44.43 3.02
28 29 1.300697 GTGACGTCCACGCCTTCTT 60.301 57.895 14.12 0.00 44.43 2.52
29 30 2.338984 GTGACGTCCACGCCTTCT 59.661 61.111 14.12 0.00 44.43 2.85
30 31 2.737376 GGTGACGTCCACGCCTTC 60.737 66.667 14.12 0.00 46.62 3.46
42 43 1.299926 ACACGTTCAGCTCGGTGAC 60.300 57.895 9.25 0.00 0.00 3.67
43 44 1.299850 CACACGTTCAGCTCGGTGA 60.300 57.895 9.25 0.00 34.24 4.02
44 45 2.943345 GCACACGTTCAGCTCGGTG 61.943 63.158 9.18 9.18 34.88 4.94
45 46 2.661866 GCACACGTTCAGCTCGGT 60.662 61.111 0.00 0.00 0.00 4.69
46 47 2.356313 AGCACACGTTCAGCTCGG 60.356 61.111 0.64 0.00 32.05 4.63
47 48 1.215014 TTCAGCACACGTTCAGCTCG 61.215 55.000 3.38 0.00 36.26 5.03
48 49 0.233332 GTTCAGCACACGTTCAGCTC 59.767 55.000 3.38 0.00 36.26 4.09
49 50 1.490693 CGTTCAGCACACGTTCAGCT 61.491 55.000 0.64 0.64 39.63 4.24
50 51 1.083401 CGTTCAGCACACGTTCAGC 60.083 57.895 0.00 0.00 32.80 4.26
70 71 2.505557 CGAACGTACGGCACCTCC 60.506 66.667 21.06 0.00 0.00 4.30
71 72 2.505557 CCGAACGTACGGCACCTC 60.506 66.667 21.06 6.84 46.20 3.85
78 79 2.174107 TCGAGTGCCGAACGTACG 59.826 61.111 15.01 15.01 45.43 3.67
86 87 1.445410 TCAAACCGATCGAGTGCCG 60.445 57.895 18.66 0.27 40.25 5.69
87 88 1.359459 GGTCAAACCGATCGAGTGCC 61.359 60.000 18.66 12.13 0.00 5.01
88 89 2.079049 GGTCAAACCGATCGAGTGC 58.921 57.895 18.66 7.43 0.00 4.40
98 99 3.545426 CGAACTTTCTTCACGGTCAAACC 60.545 47.826 0.00 0.00 34.05 3.27
99 100 3.307782 TCGAACTTTCTTCACGGTCAAAC 59.692 43.478 0.00 0.00 0.00 2.93
100 101 3.523547 TCGAACTTTCTTCACGGTCAAA 58.476 40.909 0.00 0.00 0.00 2.69
101 102 3.120792 CTCGAACTTTCTTCACGGTCAA 58.879 45.455 0.00 0.00 0.00 3.18
102 103 2.100252 ACTCGAACTTTCTTCACGGTCA 59.900 45.455 0.00 0.00 0.00 4.02
103 104 2.740452 ACTCGAACTTTCTTCACGGTC 58.260 47.619 0.00 0.00 0.00 4.79
104 105 2.884894 ACTCGAACTTTCTTCACGGT 57.115 45.000 0.00 0.00 0.00 4.83
105 106 3.635331 TGTACTCGAACTTTCTTCACGG 58.365 45.455 0.00 0.00 0.00 4.94
106 107 4.915667 TGATGTACTCGAACTTTCTTCACG 59.084 41.667 0.00 0.00 0.00 4.35
107 108 6.346678 GGTTGATGTACTCGAACTTTCTTCAC 60.347 42.308 0.00 0.00 0.00 3.18
108 109 5.694910 GGTTGATGTACTCGAACTTTCTTCA 59.305 40.000 0.00 0.00 0.00 3.02
109 110 5.164080 CGGTTGATGTACTCGAACTTTCTTC 60.164 44.000 0.00 0.00 0.00 2.87
110 111 4.684703 CGGTTGATGTACTCGAACTTTCTT 59.315 41.667 0.00 0.00 0.00 2.52
111 112 4.235360 CGGTTGATGTACTCGAACTTTCT 58.765 43.478 0.00 0.00 0.00 2.52
112 113 3.181533 GCGGTTGATGTACTCGAACTTTC 60.182 47.826 0.00 0.00 0.00 2.62
113 114 2.735134 GCGGTTGATGTACTCGAACTTT 59.265 45.455 0.00 0.00 0.00 2.66
114 115 2.334838 GCGGTTGATGTACTCGAACTT 58.665 47.619 0.00 0.00 0.00 2.66
115 116 1.731424 CGCGGTTGATGTACTCGAACT 60.731 52.381 0.00 0.00 0.00 3.01
116 117 0.638746 CGCGGTTGATGTACTCGAAC 59.361 55.000 0.00 0.00 0.00 3.95
117 118 0.241749 ACGCGGTTGATGTACTCGAA 59.758 50.000 12.47 0.00 0.00 3.71
118 119 0.241749 AACGCGGTTGATGTACTCGA 59.758 50.000 12.47 0.00 0.00 4.04
119 120 0.365523 CAACGCGGTTGATGTACTCG 59.634 55.000 12.47 0.00 45.28 4.18
120 121 1.389106 GACAACGCGGTTGATGTACTC 59.611 52.381 22.26 9.04 45.28 2.59
121 122 1.269883 TGACAACGCGGTTGATGTACT 60.270 47.619 22.26 4.65 45.28 2.73
122 123 1.141645 TGACAACGCGGTTGATGTAC 58.858 50.000 22.26 9.55 45.28 2.90
123 124 1.867166 TTGACAACGCGGTTGATGTA 58.133 45.000 22.26 7.55 45.28 2.29
124 125 1.018148 TTTGACAACGCGGTTGATGT 58.982 45.000 22.26 13.84 45.28 3.06
125 126 1.394697 GTTTGACAACGCGGTTGATG 58.605 50.000 22.26 11.18 45.28 3.07
126 127 3.837669 GTTTGACAACGCGGTTGAT 57.162 47.368 22.26 10.59 45.28 2.57
145 146 1.396644 CGTAGATCGTAAGCGGAAGC 58.603 55.000 0.00 0.00 46.19 3.86
146 147 2.349627 CCTCGTAGATCGTAAGCGGAAG 60.350 54.545 0.00 0.00 40.80 3.46
147 148 1.600957 CCTCGTAGATCGTAAGCGGAA 59.399 52.381 0.00 0.00 40.80 4.30
148 149 1.202568 TCCTCGTAGATCGTAAGCGGA 60.203 52.381 0.00 0.00 40.80 5.54
149 150 1.224075 TCCTCGTAGATCGTAAGCGG 58.776 55.000 0.00 0.00 40.80 5.52
150 151 3.481628 CGTATCCTCGTAGATCGTAAGCG 60.482 52.174 0.00 0.00 40.80 4.68
151 152 3.431572 ACGTATCCTCGTAGATCGTAAGC 59.568 47.826 0.00 0.00 42.35 3.09
161 162 4.115516 GAGTGTGTCTACGTATCCTCGTA 58.884 47.826 0.00 0.00 43.80 3.43
162 163 2.935201 GAGTGTGTCTACGTATCCTCGT 59.065 50.000 0.00 0.00 45.97 4.18
163 164 3.196463 AGAGTGTGTCTACGTATCCTCG 58.804 50.000 0.00 0.00 31.71 4.63
164 165 3.560896 GGAGAGTGTGTCTACGTATCCTC 59.439 52.174 0.00 0.00 34.71 3.71
165 166 3.543665 GGAGAGTGTGTCTACGTATCCT 58.456 50.000 0.00 0.00 34.71 3.24
166 167 2.617774 GGGAGAGTGTGTCTACGTATCC 59.382 54.545 0.00 0.00 36.91 2.59
167 168 2.617774 GGGGAGAGTGTGTCTACGTATC 59.382 54.545 0.00 0.00 36.91 2.24
168 169 2.652590 GGGGAGAGTGTGTCTACGTAT 58.347 52.381 0.00 0.00 36.91 3.06
169 170 1.340405 GGGGGAGAGTGTGTCTACGTA 60.340 57.143 0.00 0.00 36.91 3.57
170 171 0.611340 GGGGGAGAGTGTGTCTACGT 60.611 60.000 0.00 0.00 36.91 3.57
171 172 0.323542 AGGGGGAGAGTGTGTCTACG 60.324 60.000 0.00 0.00 36.91 3.51
172 173 1.476477 GAGGGGGAGAGTGTGTCTAC 58.524 60.000 0.00 0.00 34.71 2.59
173 174 0.034380 CGAGGGGGAGAGTGTGTCTA 60.034 60.000 0.00 0.00 34.71 2.59
174 175 1.304547 CGAGGGGGAGAGTGTGTCT 60.305 63.158 0.00 0.00 38.71 3.41
175 176 1.186267 AACGAGGGGGAGAGTGTGTC 61.186 60.000 0.00 0.00 0.00 3.67
176 177 0.113776 TAACGAGGGGGAGAGTGTGT 59.886 55.000 0.00 0.00 0.00 3.72
177 178 1.486211 ATAACGAGGGGGAGAGTGTG 58.514 55.000 0.00 0.00 0.00 3.82
178 179 2.249309 AATAACGAGGGGGAGAGTGT 57.751 50.000 0.00 0.00 0.00 3.55
179 180 3.555168 GCATAATAACGAGGGGGAGAGTG 60.555 52.174 0.00 0.00 0.00 3.51
180 181 2.633481 GCATAATAACGAGGGGGAGAGT 59.367 50.000 0.00 0.00 0.00 3.24
181 182 2.632996 TGCATAATAACGAGGGGGAGAG 59.367 50.000 0.00 0.00 0.00 3.20
182 183 2.684943 TGCATAATAACGAGGGGGAGA 58.315 47.619 0.00 0.00 0.00 3.71
183 184 3.261897 AGATGCATAATAACGAGGGGGAG 59.738 47.826 0.00 0.00 0.00 4.30
184 185 3.248024 AGATGCATAATAACGAGGGGGA 58.752 45.455 0.00 0.00 0.00 4.81
185 186 3.600388 GAGATGCATAATAACGAGGGGG 58.400 50.000 0.00 0.00 0.00 5.40
186 187 3.007940 TGGAGATGCATAATAACGAGGGG 59.992 47.826 0.00 0.00 0.00 4.79
187 188 4.271696 TGGAGATGCATAATAACGAGGG 57.728 45.455 0.00 0.00 0.00 4.30
188 189 4.633126 CCATGGAGATGCATAATAACGAGG 59.367 45.833 5.56 0.00 0.00 4.63
189 190 5.482006 TCCATGGAGATGCATAATAACGAG 58.518 41.667 11.44 0.00 0.00 4.18
190 191 5.482163 TCCATGGAGATGCATAATAACGA 57.518 39.130 11.44 0.00 0.00 3.85
191 192 7.267857 TCTATCCATGGAGATGCATAATAACG 58.732 38.462 21.33 0.00 0.00 3.18
192 193 9.624373 AATCTATCCATGGAGATGCATAATAAC 57.376 33.333 21.33 0.00 32.66 1.89
195 196 8.967918 CAAAATCTATCCATGGAGATGCATAAT 58.032 33.333 21.33 2.02 32.66 1.28
196 197 7.094075 GCAAAATCTATCCATGGAGATGCATAA 60.094 37.037 21.39 3.67 32.66 1.90
197 198 6.376299 GCAAAATCTATCCATGGAGATGCATA 59.624 38.462 21.39 8.30 32.66 3.14
198 199 5.185249 GCAAAATCTATCCATGGAGATGCAT 59.815 40.000 21.39 0.00 32.66 3.96
199 200 4.521639 GCAAAATCTATCCATGGAGATGCA 59.478 41.667 21.39 6.23 32.66 3.96
200 201 4.379186 CGCAAAATCTATCCATGGAGATGC 60.379 45.833 21.33 19.35 32.66 3.91
201 202 4.758674 ACGCAAAATCTATCCATGGAGATG 59.241 41.667 21.33 11.34 32.66 2.90
202 203 4.758674 CACGCAAAATCTATCCATGGAGAT 59.241 41.667 21.33 15.11 33.75 2.75
203 204 4.129380 CACGCAAAATCTATCCATGGAGA 58.871 43.478 21.33 15.39 0.00 3.71
204 205 3.304257 GCACGCAAAATCTATCCATGGAG 60.304 47.826 21.33 7.68 0.00 3.86
205 206 2.618241 GCACGCAAAATCTATCCATGGA 59.382 45.455 18.88 18.88 0.00 3.41
206 207 2.602933 CGCACGCAAAATCTATCCATGG 60.603 50.000 4.97 4.97 0.00 3.66
207 208 2.642995 CGCACGCAAAATCTATCCATG 58.357 47.619 0.00 0.00 0.00 3.66
208 209 1.002468 GCGCACGCAAAATCTATCCAT 60.002 47.619 10.65 0.00 41.49 3.41
209 210 0.376852 GCGCACGCAAAATCTATCCA 59.623 50.000 10.65 0.00 41.49 3.41
210 211 0.654472 CGCGCACGCAAAATCTATCC 60.654 55.000 16.04 0.00 42.06 2.59
211 212 0.026285 ACGCGCACGCAAAATCTATC 59.974 50.000 16.04 0.00 45.53 2.08
212 213 1.257936 CTACGCGCACGCAAAATCTAT 59.742 47.619 16.04 0.00 45.53 1.98
213 214 0.643310 CTACGCGCACGCAAAATCTA 59.357 50.000 16.04 0.00 45.53 1.98
214 215 1.289109 ACTACGCGCACGCAAAATCT 61.289 50.000 16.04 0.00 45.53 2.40
215 216 0.452122 AACTACGCGCACGCAAAATC 60.452 50.000 16.04 0.00 45.53 2.17
216 217 0.040781 AAACTACGCGCACGCAAAAT 60.041 45.000 16.04 0.00 45.53 1.82
217 218 0.248134 AAAACTACGCGCACGCAAAA 60.248 45.000 16.04 0.00 45.53 2.44
218 219 0.248134 AAAAACTACGCGCACGCAAA 60.248 45.000 16.04 0.92 45.53 3.68
219 220 1.352404 AAAAACTACGCGCACGCAA 59.648 47.368 16.04 1.30 45.53 4.85
220 221 3.015677 AAAAACTACGCGCACGCA 58.984 50.000 16.04 0.00 45.53 5.24
235 236 2.168521 TGGGAAACGTTGCATGGAAAAA 59.831 40.909 8.91 0.00 0.00 1.94
236 237 1.757118 TGGGAAACGTTGCATGGAAAA 59.243 42.857 8.91 0.00 0.00 2.29
237 238 1.403814 TGGGAAACGTTGCATGGAAA 58.596 45.000 8.91 0.00 0.00 3.13
238 239 1.067821 GTTGGGAAACGTTGCATGGAA 59.932 47.619 8.91 0.00 0.00 3.53
239 240 0.671251 GTTGGGAAACGTTGCATGGA 59.329 50.000 8.91 0.00 0.00 3.41
240 241 0.387202 TGTTGGGAAACGTTGCATGG 59.613 50.000 8.91 0.00 0.00 3.66
241 242 1.066908 AGTGTTGGGAAACGTTGCATG 59.933 47.619 8.91 0.00 0.00 4.06
242 243 1.398692 AGTGTTGGGAAACGTTGCAT 58.601 45.000 8.91 0.00 0.00 3.96
243 244 1.178276 AAGTGTTGGGAAACGTTGCA 58.822 45.000 8.91 0.00 0.00 4.08
244 245 2.097791 TGTAAGTGTTGGGAAACGTTGC 59.902 45.455 0.00 0.00 0.00 4.17
245 246 3.487879 GGTGTAAGTGTTGGGAAACGTTG 60.488 47.826 0.00 0.00 0.00 4.10
246 247 2.684374 GGTGTAAGTGTTGGGAAACGTT 59.316 45.455 0.00 0.00 0.00 3.99
247 248 2.291365 GGTGTAAGTGTTGGGAAACGT 58.709 47.619 0.00 0.00 0.00 3.99
248 249 1.262151 CGGTGTAAGTGTTGGGAAACG 59.738 52.381 0.00 0.00 0.00 3.60
249 250 2.032426 CACGGTGTAAGTGTTGGGAAAC 59.968 50.000 0.00 0.00 35.08 2.78
250 251 2.290464 CACGGTGTAAGTGTTGGGAAA 58.710 47.619 0.00 0.00 35.08 3.13
251 252 1.956297 CACGGTGTAAGTGTTGGGAA 58.044 50.000 0.00 0.00 35.08 3.97
252 253 3.690487 CACGGTGTAAGTGTTGGGA 57.310 52.632 0.00 0.00 35.08 4.37
275 276 4.879545 TGTCTTGTGTCCTTTTCACCTTAC 59.120 41.667 0.00 0.00 35.25 2.34
289 290 4.541973 TGAGCATGTCTATGTCTTGTGT 57.458 40.909 0.00 0.00 36.65 3.72
314 315 9.998106 TCTTTAGCTTGTAGACTTGAGTAAATT 57.002 29.630 0.00 0.00 0.00 1.82
321 322 8.982723 AGGATATTCTTTAGCTTGTAGACTTGA 58.017 33.333 0.00 0.00 0.00 3.02
342 343 4.768448 TGAGTTGAGTCGTTACCAAGGATA 59.232 41.667 0.00 0.00 0.00 2.59
347 348 5.970317 TCTATGAGTTGAGTCGTTACCAA 57.030 39.130 0.00 0.00 0.00 3.67
349 350 6.093771 TCTCTTCTATGAGTTGAGTCGTTACC 59.906 42.308 0.00 0.00 35.68 2.85
354 355 6.429791 TTCTCTCTTCTATGAGTTGAGTCG 57.570 41.667 0.00 0.00 35.68 4.18
355 356 7.540745 GTGTTTCTCTCTTCTATGAGTTGAGTC 59.459 40.741 0.00 0.00 35.68 3.36
357 358 7.374272 TGTGTTTCTCTCTTCTATGAGTTGAG 58.626 38.462 0.00 0.00 35.68 3.02
360 361 7.038729 TGGATGTGTTTCTCTCTTCTATGAGTT 60.039 37.037 0.00 0.00 35.68 3.01
366 367 5.012046 TGCTTGGATGTGTTTCTCTCTTCTA 59.988 40.000 0.00 0.00 0.00 2.10
368 369 4.067896 TGCTTGGATGTGTTTCTCTCTTC 58.932 43.478 0.00 0.00 0.00 2.87
379 380 3.287867 AATACCTCCTGCTTGGATGTG 57.712 47.619 14.01 4.33 45.16 3.21
380 381 3.136626 GGTAATACCTCCTGCTTGGATGT 59.863 47.826 1.41 10.68 45.16 3.06
381 382 3.496870 GGGTAATACCTCCTGCTTGGATG 60.497 52.174 9.58 0.70 45.16 3.51
382 383 2.711547 GGGTAATACCTCCTGCTTGGAT 59.288 50.000 9.58 0.00 45.16 3.41
383 384 2.124411 GGGTAATACCTCCTGCTTGGA 58.876 52.381 9.58 0.00 43.58 3.53
384 385 1.143073 GGGGTAATACCTCCTGCTTGG 59.857 57.143 9.58 0.00 38.64 3.61
386 387 2.588925 AGGGGTAATACCTCCTGCTT 57.411 50.000 15.65 0.00 40.56 3.91
387 388 2.795960 TCTAGGGGTAATACCTCCTGCT 59.204 50.000 21.98 2.60 40.56 4.24
388 389 3.255634 TCTAGGGGTAATACCTCCTGC 57.744 52.381 21.98 2.72 40.56 4.85
389 390 5.520751 CCTATCTAGGGGTAATACCTCCTG 58.479 50.000 21.98 14.75 40.56 3.86
390 391 5.817483 CCTATCTAGGGGTAATACCTCCT 57.183 47.826 18.89 18.89 40.56 3.69
409 410 3.093835 CCCGGTTCCATGCCCCTA 61.094 66.667 0.00 0.00 0.00 3.53
438 444 9.815936 CTCGACCGTTTTTACTAAAATTGTATT 57.184 29.630 0.00 0.00 35.80 1.89
440 446 8.586570 TCTCGACCGTTTTTACTAAAATTGTA 57.413 30.769 0.00 0.00 35.80 2.41
441 447 7.481275 TCTCGACCGTTTTTACTAAAATTGT 57.519 32.000 0.00 0.00 35.80 2.71
442 448 8.770850 TTTCTCGACCGTTTTTACTAAAATTG 57.229 30.769 0.00 0.00 35.80 2.32
456 462 3.543680 AATGGATGATTTCTCGACCGT 57.456 42.857 0.00 0.00 0.00 4.83
457 463 5.466728 ACATAAATGGATGATTTCTCGACCG 59.533 40.000 0.00 0.00 35.74 4.79
545 551 4.697828 TCCAAAACTGCTCGCATACATTTA 59.302 37.500 0.00 0.00 0.00 1.40
557 563 1.978617 CCGGCCATCCAAAACTGCT 60.979 57.895 2.24 0.00 0.00 4.24
558 564 2.573340 CCGGCCATCCAAAACTGC 59.427 61.111 2.24 0.00 0.00 4.40
561 567 2.710902 GGAGCCGGCCATCCAAAAC 61.711 63.158 25.72 6.72 35.54 2.43
562 568 2.362375 GGAGCCGGCCATCCAAAA 60.362 61.111 25.72 0.00 35.54 2.44
572 578 0.947244 GACATTAATGCAGGAGCCGG 59.053 55.000 15.48 0.00 41.13 6.13
580 586 3.326836 TCAGTCACGGACATTAATGCA 57.673 42.857 15.48 0.00 34.60 3.96
584 590 4.819105 AGGAATCAGTCACGGACATTAA 57.181 40.909 6.78 0.00 34.60 1.40
585 591 4.466370 AGAAGGAATCAGTCACGGACATTA 59.534 41.667 6.78 0.00 34.60 1.90
587 593 2.834549 AGAAGGAATCAGTCACGGACAT 59.165 45.455 6.78 0.00 34.60 3.06
591 597 2.611518 GACAGAAGGAATCAGTCACGG 58.388 52.381 0.00 0.00 42.45 4.94
593 599 2.611518 CGGACAGAAGGAATCAGTCAC 58.388 52.381 3.88 0.00 44.12 3.67
594 600 1.066858 GCGGACAGAAGGAATCAGTCA 60.067 52.381 3.88 0.00 44.12 3.41
596 602 0.108615 CGCGGACAGAAGGAATCAGT 60.109 55.000 0.00 0.00 0.00 3.41
597 603 0.807667 CCGCGGACAGAAGGAATCAG 60.808 60.000 24.07 0.00 0.00 2.90
599 605 0.108329 TTCCGCGGACAGAAGGAATC 60.108 55.000 31.19 0.00 37.79 2.52
600 606 0.108138 CTTCCGCGGACAGAAGGAAT 60.108 55.000 31.19 0.00 41.34 3.01
601 607 1.292223 CTTCCGCGGACAGAAGGAA 59.708 57.895 31.19 9.90 40.12 3.36
603 609 2.815647 GCTTCCGCGGACAGAAGG 60.816 66.667 31.19 14.44 39.91 3.46
604 610 0.179111 TATGCTTCCGCGGACAGAAG 60.179 55.000 31.19 23.69 41.99 2.85
605 611 0.464036 ATATGCTTCCGCGGACAGAA 59.536 50.000 31.19 22.52 39.65 3.02
606 612 0.464036 AATATGCTTCCGCGGACAGA 59.536 50.000 31.19 21.59 39.65 3.41
607 613 1.299541 AAATATGCTTCCGCGGACAG 58.700 50.000 31.19 26.77 39.65 3.51
608 614 2.605837 TAAATATGCTTCCGCGGACA 57.394 45.000 31.19 24.47 39.65 4.02
609 615 2.159627 CCATAAATATGCTTCCGCGGAC 59.840 50.000 31.19 18.84 39.65 4.79
610 616 2.422597 CCATAAATATGCTTCCGCGGA 58.577 47.619 27.28 27.28 39.65 5.54
611 617 1.468520 CCCATAAATATGCTTCCGCGG 59.531 52.381 22.12 22.12 39.65 6.46
612 618 2.095768 CACCCATAAATATGCTTCCGCG 60.096 50.000 0.00 0.00 39.65 6.46
613 619 3.146066 TCACCCATAAATATGCTTCCGC 58.854 45.455 0.00 0.00 32.40 5.54
614 620 3.189287 GCTCACCCATAAATATGCTTCCG 59.811 47.826 0.00 0.00 32.40 4.30
615 621 3.189287 CGCTCACCCATAAATATGCTTCC 59.811 47.826 0.00 0.00 32.40 3.46
616 622 3.815401 ACGCTCACCCATAAATATGCTTC 59.185 43.478 0.00 0.00 32.40 3.86
617 623 3.820557 ACGCTCACCCATAAATATGCTT 58.179 40.909 0.00 0.00 32.40 3.91
619 625 3.304659 CCAACGCTCACCCATAAATATGC 60.305 47.826 0.00 0.00 32.40 3.14
628 634 0.535335 GTATCTCCAACGCTCACCCA 59.465 55.000 0.00 0.00 0.00 4.51
633 639 3.814005 TTTAGGGTATCTCCAACGCTC 57.186 47.619 0.00 0.00 40.27 5.03
635 641 3.181458 TGGATTTAGGGTATCTCCAACGC 60.181 47.826 0.00 0.00 38.11 4.84
636 642 4.682778 TGGATTTAGGGTATCTCCAACG 57.317 45.455 0.00 0.00 38.11 4.10
682 688 5.514274 TCGGGAAATGCCATTAGAATTTC 57.486 39.130 0.00 0.00 38.84 2.17
685 691 5.181245 CGTATTCGGGAAATGCCATTAGAAT 59.819 40.000 11.96 11.96 38.95 2.40
691 697 0.951558 GCGTATTCGGGAAATGCCAT 59.048 50.000 0.00 0.00 38.95 4.40
710 716 1.016130 AGACGCCACTGCAATTCTCG 61.016 55.000 0.00 0.00 37.32 4.04
718 724 2.231215 AATCAGATAGACGCCACTGC 57.769 50.000 0.00 0.00 0.00 4.40
721 727 4.323553 AGGTTAATCAGATAGACGCCAC 57.676 45.455 0.00 0.00 0.00 5.01
722 728 5.353394 AAAGGTTAATCAGATAGACGCCA 57.647 39.130 0.00 0.00 0.00 5.69
761 767 3.070734 AGCACACATTCTTCTGTCTCTGT 59.929 43.478 0.00 0.00 0.00 3.41
796 802 1.623811 TCCCAAGAGAACCCTCGAAAG 59.376 52.381 0.00 0.00 44.08 2.62
808 814 7.290110 AGTAAACCAAAGAATTTCCCAAGAG 57.710 36.000 0.00 0.00 35.03 2.85
810 816 6.041523 TGGAGTAAACCAAAGAATTTCCCAAG 59.958 38.462 0.00 0.00 35.03 3.61
846 852 2.257409 ATTCCGAATGCCCACGAGCT 62.257 55.000 0.00 0.00 0.00 4.09
848 854 0.461870 TCATTCCGAATGCCCACGAG 60.462 55.000 15.21 0.00 38.77 4.18
919 947 1.067250 CTAGCTGCGGAGGCTTCTC 59.933 63.158 5.93 0.00 40.74 2.87
920 948 2.430610 CCTAGCTGCGGAGGCTTCT 61.431 63.158 5.93 0.00 40.74 2.85
921 949 2.107953 CCTAGCTGCGGAGGCTTC 59.892 66.667 5.93 0.00 40.74 3.86
922 950 3.474570 CCCTAGCTGCGGAGGCTT 61.475 66.667 15.72 0.00 40.74 4.35
923 951 4.787280 ACCCTAGCTGCGGAGGCT 62.787 66.667 15.72 6.09 43.02 4.58
924 952 1.968050 TAAACCCTAGCTGCGGAGGC 61.968 60.000 15.72 0.00 40.52 4.70
925 953 0.179081 GTAAACCCTAGCTGCGGAGG 60.179 60.000 14.57 14.57 0.00 4.30
926 954 0.179081 GGTAAACCCTAGCTGCGGAG 60.179 60.000 0.00 0.00 0.00 4.63
927 955 1.902556 GGTAAACCCTAGCTGCGGA 59.097 57.895 7.84 0.00 0.00 5.54
928 956 1.520787 CGGTAAACCCTAGCTGCGG 60.521 63.158 0.00 0.00 0.00 5.69
1236 1264 3.940640 CATGCGATTGCCGACCGG 61.941 66.667 0.00 0.00 41.78 5.28
1237 1265 0.943835 TATCATGCGATTGCCGACCG 60.944 55.000 1.50 0.00 41.78 4.79
1238 1266 0.512952 GTATCATGCGATTGCCGACC 59.487 55.000 1.50 0.00 41.78 4.79
1239 1267 1.193203 CAGTATCATGCGATTGCCGAC 59.807 52.381 1.50 0.00 41.78 4.79
1240 1268 1.202521 ACAGTATCATGCGATTGCCGA 60.203 47.619 1.50 0.00 41.78 5.54
1285 1313 6.991485 AATTGACGCTGATTTTGTACAAAG 57.009 33.333 19.72 10.43 0.00 2.77
1379 1554 2.801077 AGCCCAACCATTACTACACC 57.199 50.000 0.00 0.00 0.00 4.16
1410 1585 6.183360 GGCTCAAAACTTATGAATCTCCTGTC 60.183 42.308 0.00 0.00 0.00 3.51
1416 1591 6.715280 TCTCAGGCTCAAAACTTATGAATCT 58.285 36.000 0.00 0.00 0.00 2.40
1436 1611 3.920231 AGCTTTGCACCATATCTCTCA 57.080 42.857 0.00 0.00 0.00 3.27
1509 1684 4.141937 CCTCTCCAATCGTATGAAGGTTCA 60.142 45.833 6.67 0.00 42.14 3.18
1556 1735 2.605366 GACAGCGGATTTCTAGAGTTGC 59.395 50.000 0.00 0.00 0.00 4.17
1599 1778 5.010922 TGGCAGATTAGTGCTTTGAACATTT 59.989 36.000 0.00 0.00 43.45 2.32
1600 1779 4.523943 TGGCAGATTAGTGCTTTGAACATT 59.476 37.500 0.00 0.00 43.45 2.71
1628 1807 6.763610 ACACAAGAAGAGGTGAACTAAGAAAG 59.236 38.462 0.00 0.00 38.38 2.62
1644 1823 2.483877 ACACACACACACACACAAGAAG 59.516 45.455 0.00 0.00 0.00 2.85
1647 1826 1.535028 ACACACACACACACACACAAG 59.465 47.619 0.00 0.00 0.00 3.16
1650 1829 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1651 1830 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1652 1831 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1653 1832 1.265365 CAACACACACACACACACACA 59.735 47.619 0.00 0.00 0.00 3.72
1654 1833 1.533299 TCAACACACACACACACACAC 59.467 47.619 0.00 0.00 0.00 3.82
1655 1834 1.884235 TCAACACACACACACACACA 58.116 45.000 0.00 0.00 0.00 3.72
1656 1835 2.977169 GTTTCAACACACACACACACAC 59.023 45.455 0.00 0.00 0.00 3.82
1657 1836 2.618709 TGTTTCAACACACACACACACA 59.381 40.909 0.00 0.00 33.17 3.72
1658 1837 3.275400 TGTTTCAACACACACACACAC 57.725 42.857 0.00 0.00 33.17 3.82
1659 1838 4.511617 AATGTTTCAACACACACACACA 57.488 36.364 0.00 0.00 42.51 3.72
1660 1839 5.034152 CCTAATGTTTCAACACACACACAC 58.966 41.667 0.00 0.00 42.51 3.82
1666 1845 7.430441 ACAATAACCCTAATGTTTCAACACAC 58.570 34.615 0.00 0.00 42.51 3.82
1693 1872 6.995686 TCACCGCCATGATGTTTATTAATACT 59.004 34.615 0.00 0.00 0.00 2.12
1720 1899 4.240096 CAAATTGAGAGAATTGTGGTGCC 58.760 43.478 0.00 0.00 0.00 5.01
1817 1998 1.963464 TACCGGGGGATTCGCTCAAC 61.963 60.000 6.32 0.00 0.00 3.18
1818 1999 1.682451 CTACCGGGGGATTCGCTCAA 61.682 60.000 6.32 0.00 0.00 3.02
1819 2000 2.042741 TACCGGGGGATTCGCTCA 60.043 61.111 6.32 0.00 0.00 4.26
1820 2001 2.735237 CTACCGGGGGATTCGCTC 59.265 66.667 6.32 0.00 0.00 5.03
1832 2033 2.893398 GGTGCTGGAGACCTACCG 59.107 66.667 0.00 0.00 0.00 4.02
1849 2050 3.250323 CAGCGTCGATGAGGTGCG 61.250 66.667 9.31 0.00 0.00 5.34
1860 2061 3.503363 GTCATGGCCTGCAGCGTC 61.503 66.667 8.66 3.83 45.17 5.19
1914 2115 1.017387 CCCCGCAAATGAGCTACTTC 58.983 55.000 0.00 0.00 0.00 3.01
1922 2123 0.038890 TCAATGTCCCCCGCAAATGA 59.961 50.000 0.00 0.00 0.00 2.57
1943 2144 4.603946 GCCCACCGTCTATCCCGC 62.604 72.222 0.00 0.00 0.00 6.13
1948 2149 1.602237 CAACCTGCCCACCGTCTAT 59.398 57.895 0.00 0.00 0.00 1.98
2055 2256 1.045407 CCCATGGCCATTCATTCCAG 58.955 55.000 17.92 1.41 32.78 3.86
2076 2277 5.087323 TCTCCTTTATCCTGTCACAGAAGT 58.913 41.667 6.30 0.00 32.44 3.01
2095 2297 1.019805 GCACCACCGCTTAACTCTCC 61.020 60.000 0.00 0.00 0.00 3.71
2132 2334 4.386951 CCGCCGGTCATGTCCACA 62.387 66.667 9.71 0.00 0.00 4.17
2159 2361 1.334054 CGTTTAGAACTGGTCGACCG 58.666 55.000 28.70 23.92 39.43 4.79
2179 2381 6.371595 ACATGGCAAAATATTGAAGGGAAA 57.628 33.333 0.00 0.00 38.94 3.13
2252 2454 5.243954 ACAACTAGACAAGTCATCTGCTGTA 59.756 40.000 0.00 0.00 37.50 2.74
2292 2494 6.882768 AGGAGAAACATGAGAAGGAAGTAT 57.117 37.500 0.00 0.00 0.00 2.12
2341 2543 6.312399 TCGTCTTTACTCGTAAAACTGGTA 57.688 37.500 4.08 0.00 34.95 3.25
2396 2598 7.880713 AGAATTACCTTGAGAAAGAAAGGACTC 59.119 37.037 8.39 0.00 44.93 3.36
2541 2743 4.333649 CGTCACATTACCTGAATCAGCAAT 59.666 41.667 4.40 3.82 0.00 3.56
2596 2798 6.372931 AGGCCCACAATAGCAAATTAGAATA 58.627 36.000 0.00 0.00 0.00 1.75
2618 2820 1.228003 TGGTAACACGGCCACAAGG 60.228 57.895 2.24 0.00 46.17 3.61
2619 2821 4.466133 TGGTAACACGGCCACAAG 57.534 55.556 2.24 0.00 46.17 3.16
3337 3552 1.712056 TTGTCACTTCCTTCCGGAGA 58.288 50.000 3.34 0.00 41.25 3.71
3431 3647 0.604578 GCCCAATTGAGCAAGAGCAA 59.395 50.000 7.12 0.00 45.49 3.91
3445 3661 1.078988 GTATCGAACACGGGCCCAA 60.079 57.895 24.92 0.00 0.00 4.12
3595 3813 3.877508 GCACCCCATTGATACACTTAGTC 59.122 47.826 0.00 0.00 0.00 2.59
3807 4033 4.571176 GGAACGGGTGTGAGAATATCTTTC 59.429 45.833 0.00 0.00 0.00 2.62
3820 4046 2.358247 GCGACATGGAACGGGTGT 60.358 61.111 0.00 0.00 0.00 4.16
3955 4181 2.223572 CCTTGCGGCAAACTCATAATCC 60.224 50.000 17.13 0.00 0.00 3.01
4018 4244 5.650266 TGGAAACTTGTCACTAAATGTGTGT 59.350 36.000 0.00 0.00 46.27 3.72
4178 4407 6.038271 ACAAACACCTAACTTTGCTGAGTAAG 59.962 38.462 0.00 0.00 31.63 2.34
4241 4474 1.476007 GGACCTCCCAGATCATCCCG 61.476 65.000 0.00 0.00 34.14 5.14
4242 4475 2.457759 GGACCTCCCAGATCATCCC 58.542 63.158 0.00 0.00 34.14 3.85
4253 4486 0.960861 CTCTTTTTGGCGGGACCTCC 60.961 60.000 0.00 0.00 40.22 4.30
4254 4487 0.960861 CCTCTTTTTGGCGGGACCTC 60.961 60.000 0.00 0.00 40.22 3.85
4255 4488 1.074951 CCTCTTTTTGGCGGGACCT 59.925 57.895 0.00 0.00 40.22 3.85
4256 4489 1.977009 CCCTCTTTTTGGCGGGACC 60.977 63.158 0.00 0.00 39.08 4.46
4257 4490 2.636412 GCCCTCTTTTTGGCGGGAC 61.636 63.158 0.00 0.00 39.08 4.46
4258 4491 2.282887 GCCCTCTTTTTGGCGGGA 60.283 61.111 0.00 0.00 39.08 5.14
4262 4495 0.523519 CTTCTCGCCCTCTTTTTGGC 59.476 55.000 0.00 0.00 44.41 4.52
4263 4496 2.185004 TCTTCTCGCCCTCTTTTTGG 57.815 50.000 0.00 0.00 0.00 3.28
4264 4497 3.338249 TGATCTTCTCGCCCTCTTTTTG 58.662 45.455 0.00 0.00 0.00 2.44
4265 4498 3.703001 TGATCTTCTCGCCCTCTTTTT 57.297 42.857 0.00 0.00 0.00 1.94
4266 4499 3.539604 CATGATCTTCTCGCCCTCTTTT 58.460 45.455 0.00 0.00 0.00 2.27
4267 4500 2.158842 CCATGATCTTCTCGCCCTCTTT 60.159 50.000 0.00 0.00 0.00 2.52
4268 4501 1.415659 CCATGATCTTCTCGCCCTCTT 59.584 52.381 0.00 0.00 0.00 2.85
4269 4502 1.047002 CCATGATCTTCTCGCCCTCT 58.953 55.000 0.00 0.00 0.00 3.69
4270 4503 0.602372 GCCATGATCTTCTCGCCCTC 60.602 60.000 0.00 0.00 0.00 4.30
4271 4504 1.449353 GCCATGATCTTCTCGCCCT 59.551 57.895 0.00 0.00 0.00 5.19
4272 4505 1.958205 CGCCATGATCTTCTCGCCC 60.958 63.158 0.00 0.00 0.00 6.13
4273 4506 2.602322 GCGCCATGATCTTCTCGCC 61.602 63.158 0.00 0.00 37.02 5.54
4274 4507 1.829349 CTGCGCCATGATCTTCTCGC 61.829 60.000 4.18 13.64 42.47 5.03
4277 4510 2.219458 CAATCTGCGCCATGATCTTCT 58.781 47.619 4.18 0.00 0.00 2.85
4280 4513 2.048444 AACAATCTGCGCCATGATCT 57.952 45.000 4.18 0.00 0.00 2.75
4293 4526 3.866910 CAGTGGCCAATGCATAAACAATC 59.133 43.478 21.78 0.00 40.13 2.67
4333 4571 2.158475 ACAAGAACAGGGCCATCAAGAA 60.158 45.455 6.18 0.00 0.00 2.52
4357 4595 2.428171 CCAACAAGCAATATCCTGGGTG 59.572 50.000 0.00 0.00 0.00 4.61
4387 4625 0.100503 AGCAAAACGCACCAGACAAC 59.899 50.000 0.00 0.00 46.13 3.32
4390 4628 4.922791 GAGCAAAACGCACCAGAC 57.077 55.556 0.00 0.00 46.13 3.51
4426 4664 3.166489 GCTACTGCTACCCTACAACTG 57.834 52.381 0.00 0.00 36.03 3.16
4464 4702 3.963129 ACCAACAGAAACAGGAAACAGA 58.037 40.909 0.00 0.00 0.00 3.41
4471 4709 4.159506 TCCTTCAAAACCAACAGAAACAGG 59.840 41.667 0.00 0.00 0.00 4.00
4477 4715 4.144297 CCTCATCCTTCAAAACCAACAGA 58.856 43.478 0.00 0.00 0.00 3.41
4532 4770 9.884636 ACCAAAATTAGAGCGCATATATACATA 57.115 29.630 11.47 0.00 0.00 2.29
4533 4771 8.792830 ACCAAAATTAGAGCGCATATATACAT 57.207 30.769 11.47 0.00 0.00 2.29
4534 4772 8.615878 AACCAAAATTAGAGCGCATATATACA 57.384 30.769 11.47 0.00 0.00 2.29
4535 4773 8.936864 AGAACCAAAATTAGAGCGCATATATAC 58.063 33.333 11.47 0.00 0.00 1.47
4536 4774 9.502091 AAGAACCAAAATTAGAGCGCATATATA 57.498 29.630 11.47 0.00 0.00 0.86
4537 4775 7.986085 AGAACCAAAATTAGAGCGCATATAT 57.014 32.000 11.47 0.00 0.00 0.86
4538 4776 7.801716 AAGAACCAAAATTAGAGCGCATATA 57.198 32.000 11.47 0.00 0.00 0.86
4539 4777 6.699575 AAGAACCAAAATTAGAGCGCATAT 57.300 33.333 11.47 0.00 0.00 1.78
4540 4778 6.321717 CAAAGAACCAAAATTAGAGCGCATA 58.678 36.000 11.47 0.00 0.00 3.14
4541 4779 5.163513 CAAAGAACCAAAATTAGAGCGCAT 58.836 37.500 11.47 0.00 0.00 4.73
4542 4780 4.545610 CAAAGAACCAAAATTAGAGCGCA 58.454 39.130 11.47 0.00 0.00 6.09
4543 4781 3.364920 GCAAAGAACCAAAATTAGAGCGC 59.635 43.478 0.00 0.00 0.00 5.92
4544 4782 4.798574 AGCAAAGAACCAAAATTAGAGCG 58.201 39.130 0.00 0.00 0.00 5.03
4545 4783 7.593825 TCTAAGCAAAGAACCAAAATTAGAGC 58.406 34.615 0.00 0.00 0.00 4.09
4546 4784 8.239998 CCTCTAAGCAAAGAACCAAAATTAGAG 58.760 37.037 10.31 10.31 42.05 2.43
4547 4785 7.724061 ACCTCTAAGCAAAGAACCAAAATTAGA 59.276 33.333 0.00 0.00 0.00 2.10
4548 4786 7.886338 ACCTCTAAGCAAAGAACCAAAATTAG 58.114 34.615 0.00 0.00 0.00 1.73
4549 4787 7.833285 ACCTCTAAGCAAAGAACCAAAATTA 57.167 32.000 0.00 0.00 0.00 1.40
4550 4788 6.731292 ACCTCTAAGCAAAGAACCAAAATT 57.269 33.333 0.00 0.00 0.00 1.82
4551 4789 7.004691 AGTACCTCTAAGCAAAGAACCAAAAT 58.995 34.615 0.00 0.00 0.00 1.82
4552 4790 6.362248 AGTACCTCTAAGCAAAGAACCAAAA 58.638 36.000 0.00 0.00 0.00 2.44
4553 4791 5.937111 AGTACCTCTAAGCAAAGAACCAAA 58.063 37.500 0.00 0.00 0.00 3.28
4554 4792 5.307196 AGAGTACCTCTAAGCAAAGAACCAA 59.693 40.000 0.00 0.00 39.28 3.67
4555 4793 4.838986 AGAGTACCTCTAAGCAAAGAACCA 59.161 41.667 0.00 0.00 39.28 3.67
4556 4794 5.172205 CAGAGTACCTCTAAGCAAAGAACC 58.828 45.833 0.00 0.00 38.99 3.62
4557 4795 5.635700 CACAGAGTACCTCTAAGCAAAGAAC 59.364 44.000 0.00 0.00 38.99 3.01
4558 4796 5.784177 CACAGAGTACCTCTAAGCAAAGAA 58.216 41.667 0.00 0.00 38.99 2.52
4559 4797 4.322049 GCACAGAGTACCTCTAAGCAAAGA 60.322 45.833 10.44 0.00 38.99 2.52
4560 4798 3.929610 GCACAGAGTACCTCTAAGCAAAG 59.070 47.826 10.44 0.00 38.99 2.77
4561 4799 3.578716 AGCACAGAGTACCTCTAAGCAAA 59.421 43.478 15.17 0.00 38.99 3.68
4562 4800 3.165875 AGCACAGAGTACCTCTAAGCAA 58.834 45.455 15.17 0.00 38.99 3.91
4563 4801 2.808919 AGCACAGAGTACCTCTAAGCA 58.191 47.619 15.17 0.00 38.99 3.91
4564 4802 3.056465 ACAAGCACAGAGTACCTCTAAGC 60.056 47.826 8.30 8.30 38.99 3.09
4565 4803 4.461081 AGACAAGCACAGAGTACCTCTAAG 59.539 45.833 0.00 0.00 38.99 2.18
4566 4804 4.218635 CAGACAAGCACAGAGTACCTCTAA 59.781 45.833 0.00 0.00 38.99 2.10
4567 4805 3.759086 CAGACAAGCACAGAGTACCTCTA 59.241 47.826 0.00 0.00 38.99 2.43
4568 4806 2.560542 CAGACAAGCACAGAGTACCTCT 59.439 50.000 0.00 0.00 42.11 3.69
4569 4807 2.297597 ACAGACAAGCACAGAGTACCTC 59.702 50.000 0.00 0.00 0.00 3.85
4570 4808 2.320781 ACAGACAAGCACAGAGTACCT 58.679 47.619 0.00 0.00 0.00 3.08
4571 4809 2.821991 ACAGACAAGCACAGAGTACC 57.178 50.000 0.00 0.00 0.00 3.34
4572 4810 6.866770 TGTTAATACAGACAAGCACAGAGTAC 59.133 38.462 0.00 0.00 0.00 2.73
4573 4811 6.988522 TGTTAATACAGACAAGCACAGAGTA 58.011 36.000 0.00 0.00 0.00 2.59
4574 4812 5.853936 TGTTAATACAGACAAGCACAGAGT 58.146 37.500 0.00 0.00 0.00 3.24
4575 4813 6.183360 CCATGTTAATACAGACAAGCACAGAG 60.183 42.308 0.00 0.00 37.77 3.35
4576 4814 5.643348 CCATGTTAATACAGACAAGCACAGA 59.357 40.000 0.00 0.00 37.77 3.41
4577 4815 5.643348 TCCATGTTAATACAGACAAGCACAG 59.357 40.000 0.00 0.00 37.77 3.66
4578 4816 5.555966 TCCATGTTAATACAGACAAGCACA 58.444 37.500 0.00 0.00 37.77 4.57
4579 4817 6.494893 TTCCATGTTAATACAGACAAGCAC 57.505 37.500 0.00 0.00 37.77 4.40
4580 4818 7.701539 ATTTCCATGTTAATACAGACAAGCA 57.298 32.000 0.00 0.00 37.77 3.91
4584 4822 9.461312 AGCTTTATTTCCATGTTAATACAGACA 57.539 29.630 11.47 0.00 37.77 3.41
4600 4838 9.696917 TTCTTCTCAATGGAAAAGCTTTATTTC 57.303 29.630 13.10 6.47 36.32 2.17
4604 4842 9.696917 GAATTTCTTCTCAATGGAAAAGCTTTA 57.303 29.630 13.10 0.00 33.58 1.85
4605 4843 8.427276 AGAATTTCTTCTCAATGGAAAAGCTTT 58.573 29.630 5.69 5.69 37.09 3.51
4606 4844 7.871463 CAGAATTTCTTCTCAATGGAAAAGCTT 59.129 33.333 0.00 0.00 39.78 3.74
4607 4845 7.376615 CAGAATTTCTTCTCAATGGAAAAGCT 58.623 34.615 0.00 0.00 39.78 3.74
4608 4846 6.589139 CCAGAATTTCTTCTCAATGGAAAAGC 59.411 38.462 0.00 0.00 39.78 3.51
4609 4847 6.589139 GCCAGAATTTCTTCTCAATGGAAAAG 59.411 38.462 0.00 0.00 39.78 2.27
4610 4848 6.041865 TGCCAGAATTTCTTCTCAATGGAAAA 59.958 34.615 0.00 0.00 39.78 2.29
4611 4849 5.539574 TGCCAGAATTTCTTCTCAATGGAAA 59.460 36.000 0.00 0.00 39.78 3.13
4612 4850 5.078949 TGCCAGAATTTCTTCTCAATGGAA 58.921 37.500 0.00 0.00 39.78 3.53
4613 4851 4.665451 TGCCAGAATTTCTTCTCAATGGA 58.335 39.130 0.00 0.00 39.78 3.41
4614 4852 5.395682 TTGCCAGAATTTCTTCTCAATGG 57.604 39.130 0.00 0.00 39.78 3.16
4615 4853 7.321153 AGAATTGCCAGAATTTCTTCTCAATG 58.679 34.615 13.69 0.00 39.78 2.82
4616 4854 7.477945 AGAATTGCCAGAATTTCTTCTCAAT 57.522 32.000 0.00 4.39 39.78 2.57
4617 4855 6.906157 AGAATTGCCAGAATTTCTTCTCAA 57.094 33.333 0.00 2.30 39.78 3.02
4618 4856 6.718454 AGAAGAATTGCCAGAATTTCTTCTCA 59.282 34.615 16.86 0.00 39.78 3.27
4619 4857 7.155655 AGAAGAATTGCCAGAATTTCTTCTC 57.844 36.000 16.86 0.00 39.78 2.87
4620 4858 7.536159 AAGAAGAATTGCCAGAATTTCTTCT 57.464 32.000 16.86 16.86 42.77 2.85
4621 4859 8.599055 AAAAGAAGAATTGCCAGAATTTCTTC 57.401 30.769 13.63 13.63 34.34 2.87
4622 4860 7.658982 GGAAAAGAAGAATTGCCAGAATTTCTT 59.341 33.333 0.00 0.00 0.00 2.52
4623 4861 7.015974 AGGAAAAGAAGAATTGCCAGAATTTCT 59.984 33.333 0.00 0.00 0.00 2.52
4624 4862 7.157347 AGGAAAAGAAGAATTGCCAGAATTTC 58.843 34.615 0.00 0.00 0.00 2.17
4625 4863 7.015974 AGAGGAAAAGAAGAATTGCCAGAATTT 59.984 33.333 0.00 0.00 0.00 1.82
4626 4864 6.496218 AGAGGAAAAGAAGAATTGCCAGAATT 59.504 34.615 0.00 0.00 0.00 2.17
4627 4865 6.015282 AGAGGAAAAGAAGAATTGCCAGAAT 58.985 36.000 0.00 0.00 0.00 2.40
4628 4866 5.388654 AGAGGAAAAGAAGAATTGCCAGAA 58.611 37.500 0.00 0.00 0.00 3.02
4629 4867 4.990526 AGAGGAAAAGAAGAATTGCCAGA 58.009 39.130 0.00 0.00 0.00 3.86
5028 5266 9.869757 GCCAAATCCTGTTTGTAACTTATATTT 57.130 29.630 0.55 0.00 0.00 1.40
5029 5267 8.188139 CGCCAAATCCTGTTTGTAACTTATATT 58.812 33.333 0.55 0.00 0.00 1.28
5030 5268 7.554835 TCGCCAAATCCTGTTTGTAACTTATAT 59.445 33.333 0.55 0.00 0.00 0.86
5031 5269 6.879993 TCGCCAAATCCTGTTTGTAACTTATA 59.120 34.615 0.55 0.00 0.00 0.98
5032 5270 5.708230 TCGCCAAATCCTGTTTGTAACTTAT 59.292 36.000 0.55 0.00 0.00 1.73
5033 5271 5.064558 TCGCCAAATCCTGTTTGTAACTTA 58.935 37.500 0.55 0.00 0.00 2.24
5034 5272 3.886505 TCGCCAAATCCTGTTTGTAACTT 59.113 39.130 0.55 0.00 0.00 2.66
5035 5273 3.482436 TCGCCAAATCCTGTTTGTAACT 58.518 40.909 0.55 0.00 0.00 2.24
5036 5274 3.907894 TCGCCAAATCCTGTTTGTAAC 57.092 42.857 0.55 0.00 0.00 2.50
5037 5275 3.442273 GGATCGCCAAATCCTGTTTGTAA 59.558 43.478 1.15 0.00 41.78 2.41
5038 5276 3.013921 GGATCGCCAAATCCTGTTTGTA 58.986 45.455 1.15 0.00 41.78 2.41
5039 5277 1.818674 GGATCGCCAAATCCTGTTTGT 59.181 47.619 1.15 0.00 41.78 2.83
5040 5278 2.566952 GGATCGCCAAATCCTGTTTG 57.433 50.000 1.15 0.00 41.78 2.93
5046 5284 3.013921 TGTGTTAAGGATCGCCAAATCC 58.986 45.455 0.20 0.20 44.81 3.01
5047 5285 4.900635 ATGTGTTAAGGATCGCCAAATC 57.099 40.909 0.00 0.00 36.29 2.17
5048 5286 5.885912 ACTTATGTGTTAAGGATCGCCAAAT 59.114 36.000 0.00 0.00 41.46 2.32
5049 5287 5.250200 ACTTATGTGTTAAGGATCGCCAAA 58.750 37.500 0.00 0.00 41.46 3.28
5050 5288 4.839121 ACTTATGTGTTAAGGATCGCCAA 58.161 39.130 0.00 0.00 41.46 4.52
5051 5289 4.481368 ACTTATGTGTTAAGGATCGCCA 57.519 40.909 0.00 0.00 41.46 5.69
5052 5290 4.495844 GCAACTTATGTGTTAAGGATCGCC 60.496 45.833 0.00 0.00 41.46 5.54
5053 5291 4.495844 GGCAACTTATGTGTTAAGGATCGC 60.496 45.833 0.00 0.00 41.46 4.58
5054 5292 5.156804 GGCAACTTATGTGTTAAGGATCG 57.843 43.478 0.00 0.00 41.46 3.69
5071 5309 1.341209 AGGCTTGCAAAACTAGGCAAC 59.659 47.619 11.05 0.00 46.77 4.17
5072 5310 1.703411 AGGCTTGCAAAACTAGGCAA 58.297 45.000 11.05 4.41 46.77 4.52
5073 5311 2.436417 CTAGGCTTGCAAAACTAGGCA 58.564 47.619 21.10 5.49 46.77 4.75
5074 5312 1.133216 GCTAGGCTTGCAAAACTAGGC 59.867 52.381 26.05 16.61 45.12 3.93
5075 5313 2.162408 GTGCTAGGCTTGCAAAACTAGG 59.838 50.000 24.50 14.97 42.41 3.02
5076 5314 2.813754 TGTGCTAGGCTTGCAAAACTAG 59.186 45.455 24.50 23.11 42.41 2.57
5077 5315 2.813754 CTGTGCTAGGCTTGCAAAACTA 59.186 45.455 24.50 8.62 42.41 2.24
5078 5316 1.610522 CTGTGCTAGGCTTGCAAAACT 59.389 47.619 24.50 4.12 42.41 2.66
5079 5317 1.338020 ACTGTGCTAGGCTTGCAAAAC 59.662 47.619 24.50 13.31 42.41 2.43
5080 5318 1.337703 CACTGTGCTAGGCTTGCAAAA 59.662 47.619 24.50 14.90 42.41 2.44
5081 5319 0.953727 CACTGTGCTAGGCTTGCAAA 59.046 50.000 24.50 18.73 42.41 3.68
5082 5320 0.108396 TCACTGTGCTAGGCTTGCAA 59.892 50.000 24.50 13.79 42.41 4.08
5083 5321 0.325933 ATCACTGTGCTAGGCTTGCA 59.674 50.000 19.51 19.51 38.19 4.08
5084 5322 1.012841 GATCACTGTGCTAGGCTTGC 58.987 55.000 14.14 14.14 0.00 4.01
5085 5323 2.548875 GAGATCACTGTGCTAGGCTTG 58.451 52.381 2.12 0.00 0.00 4.01
5086 5324 1.484240 GGAGATCACTGTGCTAGGCTT 59.516 52.381 2.12 0.00 0.00 4.35
5087 5325 1.118838 GGAGATCACTGTGCTAGGCT 58.881 55.000 2.12 0.00 0.00 4.58
5088 5326 1.118838 AGGAGATCACTGTGCTAGGC 58.881 55.000 2.12 0.00 0.00 3.93
5089 5327 2.106566 ACAGGAGATCACTGTGCTAGG 58.893 52.381 18.68 0.00 46.67 3.02
5096 5334 4.691175 CATACAGGAACAGGAGATCACTG 58.309 47.826 13.89 13.89 41.64 3.66
5097 5335 3.133721 GCATACAGGAACAGGAGATCACT 59.866 47.826 0.00 0.00 0.00 3.41
5098 5336 3.133721 AGCATACAGGAACAGGAGATCAC 59.866 47.826 0.00 0.00 0.00 3.06
5099 5337 3.133542 CAGCATACAGGAACAGGAGATCA 59.866 47.826 0.00 0.00 0.00 2.92
5100 5338 3.133721 ACAGCATACAGGAACAGGAGATC 59.866 47.826 0.00 0.00 0.00 2.75
5101 5339 3.110705 ACAGCATACAGGAACAGGAGAT 58.889 45.455 0.00 0.00 0.00 2.75
5102 5340 2.540383 ACAGCATACAGGAACAGGAGA 58.460 47.619 0.00 0.00 0.00 3.71
5103 5341 3.195610 TGTACAGCATACAGGAACAGGAG 59.804 47.826 0.00 0.00 0.00 3.69
5104 5342 3.056107 GTGTACAGCATACAGGAACAGGA 60.056 47.826 0.00 0.00 0.00 3.86
5105 5343 3.055819 AGTGTACAGCATACAGGAACAGG 60.056 47.826 0.00 0.00 0.00 4.00
5106 5344 4.193826 AGTGTACAGCATACAGGAACAG 57.806 45.455 0.00 0.00 0.00 3.16
5107 5345 4.770531 AGTAGTGTACAGCATACAGGAACA 59.229 41.667 0.00 0.00 0.00 3.18
5108 5346 5.326200 AGTAGTGTACAGCATACAGGAAC 57.674 43.478 0.00 1.71 0.00 3.62
5109 5347 8.627403 GTTATAGTAGTGTACAGCATACAGGAA 58.373 37.037 0.00 0.00 0.00 3.36
5110 5348 7.776500 TGTTATAGTAGTGTACAGCATACAGGA 59.224 37.037 0.00 0.00 0.00 3.86
5111 5349 7.937649 TGTTATAGTAGTGTACAGCATACAGG 58.062 38.462 0.00 0.00 0.00 4.00
5112 5350 9.452065 CTTGTTATAGTAGTGTACAGCATACAG 57.548 37.037 0.00 0.00 0.00 2.74
5113 5351 7.919091 GCTTGTTATAGTAGTGTACAGCATACA 59.081 37.037 0.00 0.00 0.00 2.29
5114 5352 7.381678 GGCTTGTTATAGTAGTGTACAGCATAC 59.618 40.741 0.00 0.07 0.00 2.39
5115 5353 7.068962 TGGCTTGTTATAGTAGTGTACAGCATA 59.931 37.037 0.00 0.00 0.00 3.14
5116 5354 6.127168 TGGCTTGTTATAGTAGTGTACAGCAT 60.127 38.462 0.00 0.00 0.00 3.79
5117 5355 5.186215 TGGCTTGTTATAGTAGTGTACAGCA 59.814 40.000 0.00 0.00 0.00 4.41
5118 5356 5.657474 TGGCTTGTTATAGTAGTGTACAGC 58.343 41.667 0.00 0.00 0.00 4.40
5119 5357 8.718102 AAATGGCTTGTTATAGTAGTGTACAG 57.282 34.615 0.00 0.00 0.00 2.74
5120 5358 9.509956 AAAAATGGCTTGTTATAGTAGTGTACA 57.490 29.630 0.00 0.00 0.00 2.90
5143 5381 8.051535 AGAGATGATAATCTTCTGAGCCAAAAA 58.948 33.333 0.00 0.00 31.94 1.94
5144 5382 7.498239 CAGAGATGATAATCTTCTGAGCCAAAA 59.502 37.037 11.39 0.00 31.94 2.44
5145 5383 6.990939 CAGAGATGATAATCTTCTGAGCCAAA 59.009 38.462 11.39 0.00 31.94 3.28
5146 5384 6.099413 ACAGAGATGATAATCTTCTGAGCCAA 59.901 38.462 18.89 0.00 31.94 4.52
5147 5385 5.601729 ACAGAGATGATAATCTTCTGAGCCA 59.398 40.000 18.89 0.00 31.94 4.75
5148 5386 6.100404 ACAGAGATGATAATCTTCTGAGCC 57.900 41.667 18.89 0.00 31.94 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.