Multiple sequence alignment - TraesCS5D01G510100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G510100 chr5D 100.000 5162 0 0 1 5162 535126390 535131551 0.000000e+00 9533.0
1 TraesCS5D01G510100 chr5D 88.043 184 13 7 4918 5094 341436094 341436275 5.240000e-50 209.0
2 TraesCS5D01G510100 chr5D 86.765 136 16 2 169 303 9065266 9065132 3.220000e-32 150.0
3 TraesCS5D01G510100 chr5B 94.381 3328 119 32 1087 4380 675879845 675883138 0.000000e+00 5048.0
4 TraesCS5D01G510100 chr5B 89.127 607 31 12 4463 5044 675883323 675883919 0.000000e+00 723.0
5 TraesCS5D01G510100 chr5B 85.382 301 28 11 1 299 383024172 383024458 1.090000e-76 298.0
6 TraesCS5D01G510100 chr5B 89.130 184 11 7 4918 5094 655681058 655681239 2.420000e-53 220.0
7 TraesCS5D01G510100 chr5B 97.619 42 1 0 4420 4461 675883224 675883265 7.170000e-09 73.1
8 TraesCS5D01G510100 chr4A 90.513 3858 148 89 671 4455 636659166 636655454 0.000000e+00 4896.0
9 TraesCS5D01G510100 chr4A 90.361 664 44 10 4484 5146 636655191 636654547 0.000000e+00 854.0
10 TraesCS5D01G510100 chr4A 86.532 297 24 7 2 296 616714851 616715133 3.880000e-81 313.0
11 TraesCS5D01G510100 chr6B 88.079 302 34 2 1 300 578906947 578906646 1.770000e-94 357.0
12 TraesCS5D01G510100 chr4D 86.333 300 25 6 1 299 28463719 28464003 3.880000e-81 313.0
13 TraesCS5D01G510100 chr2D 85.662 272 25 5 1 272 579199669 579199412 1.830000e-69 274.0
14 TraesCS5D01G510100 chr3A 83.775 302 33 9 2 300 633048332 633048620 6.590000e-69 272.0
15 TraesCS5D01G510100 chr2A 82.392 301 28 13 1 300 598939637 598939361 6.680000e-59 239.0
16 TraesCS5D01G510100 chr2A 89.130 184 11 7 4918 5094 123337195 123337014 2.420000e-53 220.0
17 TraesCS5D01G510100 chr1D 82.060 301 30 11 1 300 22191988 22192265 8.640000e-58 235.0
18 TraesCS5D01G510100 chr1A 89.674 184 10 7 4918 5094 428882259 428882440 5.200000e-55 226.0
19 TraesCS5D01G510100 chr2B 83.465 254 26 7 1 250 516536736 516536495 6.730000e-54 222.0
20 TraesCS5D01G510100 chr2B 81.250 304 30 8 1 299 135711401 135711120 2.420000e-53 220.0
21 TraesCS5D01G510100 chr2B 77.049 305 49 13 1 298 257073993 257074283 6.920000e-34 156.0
22 TraesCS5D01G510100 chr3D 89.130 184 11 7 4918 5094 564092737 564092918 2.420000e-53 220.0
23 TraesCS5D01G510100 chr7A 80.071 281 38 8 20 299 173506741 173506478 5.270000e-45 193.0
24 TraesCS5D01G510100 chr4B 79.032 310 41 14 1 299 310271030 310271326 1.900000e-44 191.0
25 TraesCS5D01G510100 chr7B 79.085 306 36 15 1 300 32018796 32019079 8.830000e-43 185.0
26 TraesCS5D01G510100 chr5A 80.620 258 30 11 53 305 112047466 112047708 1.140000e-41 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G510100 chr5D 535126390 535131551 5161 False 9533.000000 9533 100.000 1 5162 1 chr5D.!!$F2 5161
1 TraesCS5D01G510100 chr5B 675879845 675883919 4074 False 1948.033333 5048 93.709 1087 5044 3 chr5B.!!$F3 3957
2 TraesCS5D01G510100 chr4A 636654547 636659166 4619 True 2875.000000 4896 90.437 671 5146 2 chr4A.!!$R1 4475

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
651 652 0.025001 CGTAAGATTTGACGCGGCAG 59.975 55.0 17.30 0.0 43.02 4.85 F
746 747 0.243636 CCACAGAAACATTTCCGGGC 59.756 55.0 0.00 0.0 37.92 6.13 F
970 1011 0.248866 GTCGCACCAAACCAAACCAG 60.249 55.0 0.00 0.0 0.00 4.00 F
2229 2305 0.170561 GTCACTCGGTGATGCGTACT 59.829 55.0 9.47 0.0 44.63 2.73 F
2775 2857 0.878416 TTTGCTGGTGATGGTAACGC 59.122 50.0 0.00 0.0 42.51 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1706 1774 0.108662 CCTCTGCACGCACACAGATA 60.109 55.000 0.55 0.00 41.84 1.98 R
1883 1957 2.027625 GTTGGCGACGAAGAGGGTG 61.028 63.158 0.00 0.00 0.00 4.61 R
2432 2508 2.202878 TGGGATCTTACAGCGCGC 60.203 61.111 26.66 26.66 0.00 6.86 R
3577 3669 0.452184 CTGAGTACCGCATCTCACGT 59.548 55.000 0.00 0.00 36.04 4.49 R
4342 4452 0.321298 TTCTAACTGGTTCGGCAGGC 60.321 55.000 0.00 0.00 0.00 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.359230 GCAAGCTCTTCGGCCTGT 60.359 61.111 0.00 0.00 0.00 4.00
18 19 1.079127 GCAAGCTCTTCGGCCTGTA 60.079 57.895 0.00 0.00 0.00 2.74
19 20 1.086634 GCAAGCTCTTCGGCCTGTAG 61.087 60.000 0.00 0.00 0.00 2.74
20 21 0.460987 CAAGCTCTTCGGCCTGTAGG 60.461 60.000 0.00 0.00 38.53 3.18
30 31 4.393155 CCTGTAGGCGTGGCAGCA 62.393 66.667 10.33 0.00 39.27 4.41
31 32 2.816958 CTGTAGGCGTGGCAGCAG 60.817 66.667 10.33 0.00 39.27 4.24
34 35 4.328025 TAGGCGTGGCAGCAGCAA 62.328 61.111 2.65 0.00 44.61 3.91
35 36 3.626996 TAGGCGTGGCAGCAGCAAT 62.627 57.895 2.65 2.85 44.61 3.56
36 37 4.060038 GGCGTGGCAGCAGCAATT 62.060 61.111 2.65 0.00 44.61 2.32
37 38 2.048877 GCGTGGCAGCAGCAATTT 60.049 55.556 2.65 0.00 44.61 1.82
38 39 1.665599 GCGTGGCAGCAGCAATTTT 60.666 52.632 2.65 0.00 44.61 1.82
39 40 1.223417 GCGTGGCAGCAGCAATTTTT 61.223 50.000 2.65 0.00 44.61 1.94
65 66 9.581289 TTTCCCTTTTAGTAGATCATGTTTTGA 57.419 29.630 0.00 0.00 39.12 2.69
66 67 9.581289 TTCCCTTTTAGTAGATCATGTTTTGAA 57.419 29.630 0.00 0.00 38.03 2.69
67 68 9.753674 TCCCTTTTAGTAGATCATGTTTTGAAT 57.246 29.630 0.00 0.00 38.03 2.57
78 79 9.932207 AGATCATGTTTTGAATATGCAAAAAGA 57.068 25.926 20.91 18.23 45.93 2.52
79 80 9.962759 GATCATGTTTTGAATATGCAAAAAGAC 57.037 29.630 20.91 11.75 45.93 3.01
80 81 8.309163 TCATGTTTTGAATATGCAAAAAGACC 57.691 30.769 20.91 10.72 45.93 3.85
81 82 6.761731 TGTTTTGAATATGCAAAAAGACCG 57.238 33.333 20.91 0.00 45.93 4.79
82 83 5.176590 TGTTTTGAATATGCAAAAAGACCGC 59.823 36.000 20.91 9.79 45.93 5.68
83 84 4.511617 TTGAATATGCAAAAAGACCGCA 57.488 36.364 0.00 0.00 40.50 5.69
84 85 4.095410 TGAATATGCAAAAAGACCGCAG 57.905 40.909 0.00 0.00 39.39 5.18
85 86 3.755905 TGAATATGCAAAAAGACCGCAGA 59.244 39.130 0.00 0.00 39.39 4.26
86 87 4.217334 TGAATATGCAAAAAGACCGCAGAA 59.783 37.500 0.00 0.00 39.39 3.02
87 88 2.422276 ATGCAAAAAGACCGCAGAAC 57.578 45.000 0.00 0.00 39.39 3.01
88 89 0.028770 TGCAAAAAGACCGCAGAACG 59.971 50.000 0.00 0.00 43.15 3.95
89 90 1.268778 GCAAAAAGACCGCAGAACGC 61.269 55.000 0.00 0.00 41.76 4.84
90 91 0.660300 CAAAAAGACCGCAGAACGCC 60.660 55.000 0.00 0.00 41.76 5.68
91 92 0.818040 AAAAAGACCGCAGAACGCCT 60.818 50.000 0.00 0.00 41.76 5.52
92 93 0.034337 AAAAGACCGCAGAACGCCTA 59.966 50.000 0.00 0.00 41.76 3.93
93 94 0.034337 AAAGACCGCAGAACGCCTAA 59.966 50.000 0.00 0.00 41.76 2.69
94 95 0.034337 AAGACCGCAGAACGCCTAAA 59.966 50.000 0.00 0.00 41.76 1.85
95 96 0.249398 AGACCGCAGAACGCCTAAAT 59.751 50.000 0.00 0.00 41.76 1.40
96 97 1.479323 AGACCGCAGAACGCCTAAATA 59.521 47.619 0.00 0.00 41.76 1.40
97 98 2.102588 AGACCGCAGAACGCCTAAATAT 59.897 45.455 0.00 0.00 41.76 1.28
98 99 2.475487 GACCGCAGAACGCCTAAATATC 59.525 50.000 0.00 0.00 41.76 1.63
99 100 1.455786 CCGCAGAACGCCTAAATATCG 59.544 52.381 0.00 0.00 41.76 2.92
100 101 1.136611 CGCAGAACGCCTAAATATCGC 60.137 52.381 0.00 0.00 37.30 4.58
101 102 1.194772 GCAGAACGCCTAAATATCGCC 59.805 52.381 0.00 0.00 32.94 5.54
102 103 1.455786 CAGAACGCCTAAATATCGCCG 59.544 52.381 0.00 0.00 0.00 6.46
103 104 1.338973 AGAACGCCTAAATATCGCCGA 59.661 47.619 0.00 0.00 0.00 5.54
104 105 2.129607 GAACGCCTAAATATCGCCGAA 58.870 47.619 0.00 0.00 0.00 4.30
105 106 2.450609 ACGCCTAAATATCGCCGAAT 57.549 45.000 0.00 0.00 0.00 3.34
106 107 2.334838 ACGCCTAAATATCGCCGAATC 58.665 47.619 0.00 0.00 0.00 2.52
107 108 2.029290 ACGCCTAAATATCGCCGAATCT 60.029 45.455 0.00 0.00 0.00 2.40
108 109 3.192001 ACGCCTAAATATCGCCGAATCTA 59.808 43.478 0.00 0.00 0.00 1.98
109 110 4.142227 ACGCCTAAATATCGCCGAATCTAT 60.142 41.667 0.00 0.00 0.00 1.98
110 111 4.207224 CGCCTAAATATCGCCGAATCTATG 59.793 45.833 0.00 0.00 0.00 2.23
111 112 5.109903 GCCTAAATATCGCCGAATCTATGT 58.890 41.667 0.00 0.00 0.00 2.29
112 113 5.232414 GCCTAAATATCGCCGAATCTATGTC 59.768 44.000 0.00 0.00 0.00 3.06
113 114 5.455849 CCTAAATATCGCCGAATCTATGTCG 59.544 44.000 0.00 0.00 38.24 4.35
114 115 4.436242 AATATCGCCGAATCTATGTCGT 57.564 40.909 0.00 0.00 36.77 4.34
115 116 2.051879 ATCGCCGAATCTATGTCGTG 57.948 50.000 0.00 0.00 36.77 4.35
116 117 0.736636 TCGCCGAATCTATGTCGTGT 59.263 50.000 0.00 0.00 36.77 4.49
117 118 1.133598 TCGCCGAATCTATGTCGTGTT 59.866 47.619 0.00 0.00 36.77 3.32
118 119 1.924524 CGCCGAATCTATGTCGTGTTT 59.075 47.619 0.00 0.00 36.77 2.83
119 120 2.285026 CGCCGAATCTATGTCGTGTTTG 60.285 50.000 0.00 0.00 36.77 2.93
120 121 2.536928 GCCGAATCTATGTCGTGTTTGC 60.537 50.000 0.00 0.00 36.77 3.68
121 122 2.030457 CCGAATCTATGTCGTGTTTGCC 59.970 50.000 0.00 0.00 36.77 4.52
122 123 2.285026 CGAATCTATGTCGTGTTTGCCG 60.285 50.000 0.00 0.00 33.80 5.69
123 124 2.665649 ATCTATGTCGTGTTTGCCGA 57.334 45.000 0.00 0.00 0.00 5.54
124 125 2.442212 TCTATGTCGTGTTTGCCGAA 57.558 45.000 0.00 0.00 35.89 4.30
125 126 2.333926 TCTATGTCGTGTTTGCCGAAG 58.666 47.619 0.00 0.00 35.89 3.79
140 141 1.696988 CGAAGGTTGGCCGAATTTTG 58.303 50.000 0.00 0.00 40.50 2.44
141 142 1.668628 CGAAGGTTGGCCGAATTTTGG 60.669 52.381 0.00 0.00 40.50 3.28
142 143 1.616374 GAAGGTTGGCCGAATTTTGGA 59.384 47.619 6.88 0.00 40.50 3.53
143 144 1.937191 AGGTTGGCCGAATTTTGGAT 58.063 45.000 6.88 0.00 40.50 3.41
144 145 1.550072 AGGTTGGCCGAATTTTGGATG 59.450 47.619 6.88 0.00 40.50 3.51
145 146 1.548269 GGTTGGCCGAATTTTGGATGA 59.452 47.619 6.88 0.00 0.00 2.92
146 147 2.417243 GGTTGGCCGAATTTTGGATGAG 60.417 50.000 6.88 0.00 0.00 2.90
147 148 2.214376 TGGCCGAATTTTGGATGAGT 57.786 45.000 6.88 0.00 0.00 3.41
148 149 3.358111 TGGCCGAATTTTGGATGAGTA 57.642 42.857 6.88 0.00 0.00 2.59
149 150 3.897239 TGGCCGAATTTTGGATGAGTAT 58.103 40.909 6.88 0.00 0.00 2.12
150 151 3.631686 TGGCCGAATTTTGGATGAGTATG 59.368 43.478 6.88 0.00 0.00 2.39
151 152 3.632145 GGCCGAATTTTGGATGAGTATGT 59.368 43.478 6.88 0.00 0.00 2.29
152 153 4.097892 GGCCGAATTTTGGATGAGTATGTT 59.902 41.667 6.88 0.00 0.00 2.71
153 154 5.394115 GGCCGAATTTTGGATGAGTATGTTT 60.394 40.000 6.88 0.00 0.00 2.83
154 155 6.099341 GCCGAATTTTGGATGAGTATGTTTT 58.901 36.000 6.88 0.00 0.00 2.43
155 156 6.589907 GCCGAATTTTGGATGAGTATGTTTTT 59.410 34.615 6.88 0.00 0.00 1.94
156 157 7.757624 GCCGAATTTTGGATGAGTATGTTTTTA 59.242 33.333 6.88 0.00 0.00 1.52
157 158 9.632807 CCGAATTTTGGATGAGTATGTTTTTAA 57.367 29.630 0.00 0.00 0.00 1.52
181 182 8.496872 AAAAATATTTACAAAACGTCGACAGG 57.503 30.769 17.16 2.29 0.00 4.00
182 183 5.789710 ATATTTACAAAACGTCGACAGGG 57.210 39.130 17.16 1.48 0.00 4.45
183 184 1.868469 TTACAAAACGTCGACAGGGG 58.132 50.000 17.16 1.08 0.00 4.79
184 185 0.033781 TACAAAACGTCGACAGGGGG 59.966 55.000 17.16 4.20 0.00 5.40
185 186 2.281276 AAAACGTCGACAGGGGGC 60.281 61.111 17.16 0.00 0.00 5.80
186 187 4.675029 AAACGTCGACAGGGGGCG 62.675 66.667 17.16 1.70 0.00 6.13
221 222 3.467226 GGAACCCGATCGCCCTCA 61.467 66.667 10.32 0.00 0.00 3.86
222 223 2.202892 GAACCCGATCGCCCTCAC 60.203 66.667 10.32 0.00 0.00 3.51
223 224 4.143333 AACCCGATCGCCCTCACG 62.143 66.667 10.32 0.00 0.00 4.35
228 229 4.508128 GATCGCCCTCACGCCGAA 62.508 66.667 0.00 0.00 34.42 4.30
229 230 4.077184 ATCGCCCTCACGCCGAAA 62.077 61.111 0.00 0.00 34.42 3.46
230 231 3.385749 ATCGCCCTCACGCCGAAAT 62.386 57.895 0.00 0.00 34.42 2.17
231 232 2.869503 ATCGCCCTCACGCCGAAATT 62.870 55.000 0.00 0.00 34.42 1.82
232 233 1.812093 CGCCCTCACGCCGAAATTA 60.812 57.895 0.00 0.00 0.00 1.40
233 234 1.157870 CGCCCTCACGCCGAAATTAT 61.158 55.000 0.00 0.00 0.00 1.28
234 235 0.586802 GCCCTCACGCCGAAATTATC 59.413 55.000 0.00 0.00 0.00 1.75
244 245 1.462791 CGAAATTATCGCCGGTTTGC 58.537 50.000 1.90 0.00 45.89 3.68
245 246 1.835121 GAAATTATCGCCGGTTTGCC 58.165 50.000 1.90 0.00 0.00 4.52
246 247 0.458260 AAATTATCGCCGGTTTGCCC 59.542 50.000 1.90 0.00 0.00 5.36
247 248 1.388837 AATTATCGCCGGTTTGCCCC 61.389 55.000 1.90 0.00 0.00 5.80
248 249 3.999297 TTATCGCCGGTTTGCCCCC 62.999 63.158 1.90 0.00 0.00 5.40
262 263 3.861797 CCCCAGGGCGTCGCTATT 61.862 66.667 18.11 0.00 0.00 1.73
263 264 2.189521 CCCAGGGCGTCGCTATTT 59.810 61.111 18.11 0.00 0.00 1.40
264 265 1.887707 CCCAGGGCGTCGCTATTTC 60.888 63.158 18.11 0.00 0.00 2.17
265 266 1.887707 CCAGGGCGTCGCTATTTCC 60.888 63.158 18.11 9.30 0.00 3.13
266 267 1.153449 CAGGGCGTCGCTATTTCCA 60.153 57.895 18.11 0.00 0.00 3.53
267 268 1.144057 AGGGCGTCGCTATTTCCAG 59.856 57.895 18.11 0.00 0.00 3.86
268 269 2.534903 GGGCGTCGCTATTTCCAGC 61.535 63.158 18.11 0.00 38.23 4.85
269 270 2.534903 GGCGTCGCTATTTCCAGCC 61.535 63.158 18.11 0.00 38.37 4.85
270 271 2.534903 GCGTCGCTATTTCCAGCCC 61.535 63.158 10.68 0.00 38.37 5.19
271 272 1.887707 CGTCGCTATTTCCAGCCCC 60.888 63.158 0.00 0.00 38.37 5.80
272 273 1.527370 GTCGCTATTTCCAGCCCCT 59.473 57.895 0.00 0.00 38.37 4.79
273 274 0.815615 GTCGCTATTTCCAGCCCCTG 60.816 60.000 0.00 0.00 38.37 4.45
295 296 2.892425 CCGAACGGCTGGAGATGC 60.892 66.667 0.00 0.00 0.00 3.91
296 297 2.185350 CGAACGGCTGGAGATGCT 59.815 61.111 0.00 0.00 0.00 3.79
297 298 1.880340 CGAACGGCTGGAGATGCTC 60.880 63.158 0.00 0.00 0.00 4.26
298 299 1.519719 GAACGGCTGGAGATGCTCT 59.480 57.895 0.00 0.00 0.00 4.09
299 300 0.747255 GAACGGCTGGAGATGCTCTA 59.253 55.000 0.00 0.00 0.00 2.43
300 301 1.342819 GAACGGCTGGAGATGCTCTAT 59.657 52.381 0.00 0.00 0.00 1.98
301 302 0.678395 ACGGCTGGAGATGCTCTATG 59.322 55.000 0.00 0.00 0.00 2.23
302 303 0.964700 CGGCTGGAGATGCTCTATGA 59.035 55.000 0.00 0.00 0.00 2.15
303 304 1.549620 CGGCTGGAGATGCTCTATGAT 59.450 52.381 0.00 0.00 0.00 2.45
304 305 2.417107 CGGCTGGAGATGCTCTATGATC 60.417 54.545 0.00 0.00 0.00 2.92
305 306 2.093553 GGCTGGAGATGCTCTATGATCC 60.094 54.545 0.00 0.00 0.00 3.36
306 307 2.417107 GCTGGAGATGCTCTATGATCCG 60.417 54.545 0.00 0.00 0.00 4.18
307 308 2.824936 CTGGAGATGCTCTATGATCCGT 59.175 50.000 0.00 0.00 0.00 4.69
308 309 3.234353 TGGAGATGCTCTATGATCCGTT 58.766 45.455 0.00 0.00 0.00 4.44
309 310 3.643320 TGGAGATGCTCTATGATCCGTTT 59.357 43.478 0.00 0.00 0.00 3.60
310 311 3.993081 GGAGATGCTCTATGATCCGTTTG 59.007 47.826 0.00 0.00 0.00 2.93
311 312 4.502259 GGAGATGCTCTATGATCCGTTTGT 60.502 45.833 0.00 0.00 0.00 2.83
312 313 4.375272 AGATGCTCTATGATCCGTTTGTG 58.625 43.478 0.00 0.00 0.00 3.33
313 314 2.905075 TGCTCTATGATCCGTTTGTGG 58.095 47.619 0.00 0.00 0.00 4.17
314 315 2.236146 TGCTCTATGATCCGTTTGTGGT 59.764 45.455 0.00 0.00 0.00 4.16
315 316 2.609459 GCTCTATGATCCGTTTGTGGTG 59.391 50.000 0.00 0.00 0.00 4.17
316 317 3.198068 CTCTATGATCCGTTTGTGGTGG 58.802 50.000 0.00 0.00 0.00 4.61
317 318 1.670811 CTATGATCCGTTTGTGGTGGC 59.329 52.381 0.00 0.00 0.00 5.01
318 319 0.038166 ATGATCCGTTTGTGGTGGCT 59.962 50.000 0.00 0.00 0.00 4.75
319 320 0.179004 TGATCCGTTTGTGGTGGCTT 60.179 50.000 0.00 0.00 0.00 4.35
320 321 0.958822 GATCCGTTTGTGGTGGCTTT 59.041 50.000 0.00 0.00 0.00 3.51
321 322 0.673437 ATCCGTTTGTGGTGGCTTTG 59.327 50.000 0.00 0.00 0.00 2.77
322 323 0.681564 TCCGTTTGTGGTGGCTTTGT 60.682 50.000 0.00 0.00 0.00 2.83
323 324 0.248866 CCGTTTGTGGTGGCTTTGTC 60.249 55.000 0.00 0.00 0.00 3.18
324 325 0.591236 CGTTTGTGGTGGCTTTGTCG 60.591 55.000 0.00 0.00 0.00 4.35
325 326 0.736053 GTTTGTGGTGGCTTTGTCGA 59.264 50.000 0.00 0.00 0.00 4.20
326 327 1.336755 GTTTGTGGTGGCTTTGTCGAT 59.663 47.619 0.00 0.00 0.00 3.59
327 328 1.234821 TTGTGGTGGCTTTGTCGATC 58.765 50.000 0.00 0.00 0.00 3.69
328 329 0.396435 TGTGGTGGCTTTGTCGATCT 59.604 50.000 0.00 0.00 0.00 2.75
329 330 1.079503 GTGGTGGCTTTGTCGATCTC 58.920 55.000 0.00 0.00 0.00 2.75
330 331 0.684535 TGGTGGCTTTGTCGATCTCA 59.315 50.000 0.00 0.00 0.00 3.27
331 332 1.071542 TGGTGGCTTTGTCGATCTCAA 59.928 47.619 0.00 0.00 0.00 3.02
332 333 1.734465 GGTGGCTTTGTCGATCTCAAG 59.266 52.381 0.00 0.00 0.00 3.02
333 334 2.612972 GGTGGCTTTGTCGATCTCAAGA 60.613 50.000 0.00 0.00 0.00 3.02
334 335 3.265791 GTGGCTTTGTCGATCTCAAGAT 58.734 45.455 0.00 0.00 37.51 2.40
335 336 3.686726 GTGGCTTTGTCGATCTCAAGATT 59.313 43.478 0.00 0.00 34.37 2.40
336 337 4.154918 GTGGCTTTGTCGATCTCAAGATTT 59.845 41.667 0.00 0.00 34.37 2.17
337 338 4.154737 TGGCTTTGTCGATCTCAAGATTTG 59.845 41.667 0.00 0.00 34.37 2.32
338 339 4.094212 GCTTTGTCGATCTCAAGATTTGC 58.906 43.478 0.00 0.00 34.37 3.68
339 340 4.142730 GCTTTGTCGATCTCAAGATTTGCT 60.143 41.667 0.00 0.00 34.37 3.91
340 341 4.934075 TTGTCGATCTCAAGATTTGCTG 57.066 40.909 0.00 0.00 34.37 4.41
341 342 3.264947 TGTCGATCTCAAGATTTGCTGG 58.735 45.455 0.00 0.00 34.37 4.85
342 343 2.031437 GTCGATCTCAAGATTTGCTGGC 59.969 50.000 0.00 0.00 34.37 4.85
343 344 2.093288 TCGATCTCAAGATTTGCTGGCT 60.093 45.455 0.00 0.00 34.37 4.75
344 345 2.681848 CGATCTCAAGATTTGCTGGCTT 59.318 45.455 0.00 0.00 34.37 4.35
345 346 3.873361 CGATCTCAAGATTTGCTGGCTTA 59.127 43.478 0.00 0.00 34.37 3.09
346 347 4.260538 CGATCTCAAGATTTGCTGGCTTAC 60.261 45.833 0.00 0.00 34.37 2.34
347 348 3.347216 TCTCAAGATTTGCTGGCTTACC 58.653 45.455 0.00 0.00 0.00 2.85
348 349 2.424956 CTCAAGATTTGCTGGCTTACCC 59.575 50.000 0.00 0.00 33.59 3.69
349 350 2.041620 TCAAGATTTGCTGGCTTACCCT 59.958 45.455 0.00 0.00 33.59 4.34
350 351 3.265737 TCAAGATTTGCTGGCTTACCCTA 59.734 43.478 0.00 0.00 33.59 3.53
351 352 4.079787 TCAAGATTTGCTGGCTTACCCTAT 60.080 41.667 0.00 0.00 33.59 2.57
352 353 4.092116 AGATTTGCTGGCTTACCCTATC 57.908 45.455 0.00 0.00 33.59 2.08
353 354 2.325583 TTTGCTGGCTTACCCTATCG 57.674 50.000 0.00 0.00 33.59 2.92
354 355 1.491668 TTGCTGGCTTACCCTATCGA 58.508 50.000 0.00 0.00 33.59 3.59
355 356 1.491668 TGCTGGCTTACCCTATCGAA 58.508 50.000 0.00 0.00 33.59 3.71
356 357 1.412710 TGCTGGCTTACCCTATCGAAG 59.587 52.381 0.00 0.00 33.59 3.79
357 358 1.270358 GCTGGCTTACCCTATCGAAGG 60.270 57.143 0.00 0.00 46.09 3.46
358 359 2.040178 CTGGCTTACCCTATCGAAGGT 58.960 52.381 9.73 9.73 44.90 3.50
359 360 1.760613 TGGCTTACCCTATCGAAGGTG 59.239 52.381 13.72 7.59 44.90 4.00
360 361 1.540580 GGCTTACCCTATCGAAGGTGC 60.541 57.143 13.72 9.84 44.90 5.01
361 362 1.413077 GCTTACCCTATCGAAGGTGCT 59.587 52.381 13.72 0.34 44.90 4.40
362 363 2.546162 GCTTACCCTATCGAAGGTGCTC 60.546 54.545 13.72 1.46 44.90 4.26
363 364 1.315690 TACCCTATCGAAGGTGCTCG 58.684 55.000 13.72 1.85 44.90 5.03
364 365 0.683504 ACCCTATCGAAGGTGCTCGT 60.684 55.000 4.49 0.00 44.90 4.18
365 366 1.315690 CCCTATCGAAGGTGCTCGTA 58.684 55.000 11.21 0.00 44.90 3.43
366 367 1.001597 CCCTATCGAAGGTGCTCGTAC 60.002 57.143 11.21 0.00 44.90 3.67
367 368 1.674441 CCTATCGAAGGTGCTCGTACA 59.326 52.381 0.00 0.00 40.94 2.90
368 369 2.287069 CCTATCGAAGGTGCTCGTACAG 60.287 54.545 0.00 0.00 40.94 2.74
369 370 0.456221 ATCGAAGGTGCTCGTACAGG 59.544 55.000 0.00 0.00 39.84 4.00
370 371 0.892358 TCGAAGGTGCTCGTACAGGT 60.892 55.000 0.00 0.00 39.84 4.00
371 372 0.732880 CGAAGGTGCTCGTACAGGTG 60.733 60.000 0.00 0.00 34.08 4.00
372 373 0.389948 GAAGGTGCTCGTACAGGTGG 60.390 60.000 0.00 0.00 0.00 4.61
373 374 0.830444 AAGGTGCTCGTACAGGTGGA 60.830 55.000 0.00 0.00 0.00 4.02
374 375 1.215647 GGTGCTCGTACAGGTGGAG 59.784 63.158 0.00 0.00 0.00 3.86
375 376 1.533469 GGTGCTCGTACAGGTGGAGT 61.533 60.000 0.00 0.00 0.00 3.85
376 377 0.388649 GTGCTCGTACAGGTGGAGTG 60.389 60.000 0.00 0.00 0.00 3.51
377 378 0.826256 TGCTCGTACAGGTGGAGTGT 60.826 55.000 0.00 0.00 0.00 3.55
378 379 0.388649 GCTCGTACAGGTGGAGTGTG 60.389 60.000 0.00 0.00 0.00 3.82
379 380 0.388649 CTCGTACAGGTGGAGTGTGC 60.389 60.000 0.00 0.00 0.00 4.57
380 381 1.733041 CGTACAGGTGGAGTGTGCG 60.733 63.158 0.00 0.00 45.31 5.34
381 382 1.366366 GTACAGGTGGAGTGTGCGT 59.634 57.895 0.00 0.00 0.00 5.24
382 383 0.944311 GTACAGGTGGAGTGTGCGTG 60.944 60.000 0.00 0.00 0.00 5.34
383 384 1.396607 TACAGGTGGAGTGTGCGTGT 61.397 55.000 0.00 0.00 35.73 4.49
384 385 2.108976 AGGTGGAGTGTGCGTGTG 59.891 61.111 0.00 0.00 0.00 3.82
385 386 2.108157 GGTGGAGTGTGCGTGTGA 59.892 61.111 0.00 0.00 0.00 3.58
386 387 1.956170 GGTGGAGTGTGCGTGTGAG 60.956 63.158 0.00 0.00 0.00 3.51
387 388 1.227263 GTGGAGTGTGCGTGTGAGT 60.227 57.895 0.00 0.00 0.00 3.41
388 389 1.227234 TGGAGTGTGCGTGTGAGTG 60.227 57.895 0.00 0.00 0.00 3.51
389 390 1.227263 GGAGTGTGCGTGTGAGTGT 60.227 57.895 0.00 0.00 0.00 3.55
390 391 0.810031 GGAGTGTGCGTGTGAGTGTT 60.810 55.000 0.00 0.00 0.00 3.32
391 392 0.577269 GAGTGTGCGTGTGAGTGTTC 59.423 55.000 0.00 0.00 0.00 3.18
392 393 0.108377 AGTGTGCGTGTGAGTGTTCA 60.108 50.000 0.00 0.00 0.00 3.18
403 404 3.217599 TGAGTGTTCACATAGACGAGC 57.782 47.619 5.74 0.00 0.00 5.03
404 405 2.556622 TGAGTGTTCACATAGACGAGCA 59.443 45.455 5.74 0.00 0.00 4.26
405 406 3.193479 TGAGTGTTCACATAGACGAGCAT 59.807 43.478 5.74 0.00 0.00 3.79
406 407 3.515630 AGTGTTCACATAGACGAGCATG 58.484 45.455 5.74 0.00 0.00 4.06
407 408 2.029728 GTGTTCACATAGACGAGCATGC 59.970 50.000 10.51 10.51 0.00 4.06
408 409 1.256376 GTTCACATAGACGAGCATGCG 59.744 52.381 13.01 0.84 37.29 4.73
410 411 0.573987 CACATAGACGAGCATGCGTG 59.426 55.000 13.01 11.40 45.72 5.34
411 412 0.173481 ACATAGACGAGCATGCGTGT 59.827 50.000 16.23 16.23 45.72 4.49
412 413 0.573987 CATAGACGAGCATGCGTGTG 59.426 55.000 20.27 10.60 45.72 3.82
413 414 0.173481 ATAGACGAGCATGCGTGTGT 59.827 50.000 20.27 18.36 45.72 3.72
414 415 0.806241 TAGACGAGCATGCGTGTGTA 59.194 50.000 20.27 17.45 45.72 2.90
415 416 0.732880 AGACGAGCATGCGTGTGTAC 60.733 55.000 20.27 8.15 45.72 2.90
433 434 1.978542 ACGTGAGTGTCTATGTTCGC 58.021 50.000 0.00 0.00 46.97 4.70
434 435 1.268625 ACGTGAGTGTCTATGTTCGCA 59.731 47.619 0.00 0.00 46.97 5.10
435 436 2.287970 ACGTGAGTGTCTATGTTCGCAA 60.288 45.455 0.00 0.00 46.97 4.85
436 437 2.090658 CGTGAGTGTCTATGTTCGCAAC 59.909 50.000 0.00 0.00 0.00 4.17
437 438 2.090658 GTGAGTGTCTATGTTCGCAACG 59.909 50.000 0.00 0.00 0.00 4.10
438 439 2.287970 TGAGTGTCTATGTTCGCAACGT 60.288 45.455 0.00 0.00 0.00 3.99
439 440 2.058798 AGTGTCTATGTTCGCAACGTG 58.941 47.619 0.00 0.00 0.00 4.49
440 441 1.790623 GTGTCTATGTTCGCAACGTGT 59.209 47.619 0.00 0.00 0.00 4.49
441 442 2.220133 GTGTCTATGTTCGCAACGTGTT 59.780 45.455 0.00 0.00 0.00 3.32
442 443 2.867368 TGTCTATGTTCGCAACGTGTTT 59.133 40.909 0.00 0.00 0.00 2.83
443 444 4.049869 TGTCTATGTTCGCAACGTGTTTA 58.950 39.130 0.00 0.00 0.00 2.01
444 445 4.507021 TGTCTATGTTCGCAACGTGTTTAA 59.493 37.500 0.00 0.00 0.00 1.52
445 446 5.006455 TGTCTATGTTCGCAACGTGTTTAAA 59.994 36.000 0.00 0.00 0.00 1.52
446 447 5.902981 GTCTATGTTCGCAACGTGTTTAAAA 59.097 36.000 0.00 0.00 0.00 1.52
447 448 6.084551 GTCTATGTTCGCAACGTGTTTAAAAG 59.915 38.462 0.00 0.00 0.00 2.27
448 449 4.337985 TGTTCGCAACGTGTTTAAAAGA 57.662 36.364 0.00 0.00 0.00 2.52
449 450 4.720090 TGTTCGCAACGTGTTTAAAAGAA 58.280 34.783 0.00 0.00 0.00 2.52
450 451 5.152097 TGTTCGCAACGTGTTTAAAAGAAA 58.848 33.333 0.00 0.00 0.00 2.52
451 452 5.284188 TGTTCGCAACGTGTTTAAAAGAAAG 59.716 36.000 0.00 0.00 0.00 2.62
452 453 5.219226 TCGCAACGTGTTTAAAAGAAAGA 57.781 34.783 0.00 0.00 0.00 2.52
453 454 5.812652 TCGCAACGTGTTTAAAAGAAAGAT 58.187 33.333 0.00 0.00 0.00 2.40
454 455 5.679355 TCGCAACGTGTTTAAAAGAAAGATG 59.321 36.000 0.00 0.00 0.00 2.90
455 456 5.454232 CGCAACGTGTTTAAAAGAAAGATGT 59.546 36.000 0.00 0.00 0.00 3.06
456 457 6.557711 CGCAACGTGTTTAAAAGAAAGATGTG 60.558 38.462 0.00 0.00 0.00 3.21
457 458 6.291585 GCAACGTGTTTAAAAGAAAGATGTGG 60.292 38.462 0.00 0.00 0.00 4.17
458 459 5.278604 ACGTGTTTAAAAGAAAGATGTGGC 58.721 37.500 0.00 0.00 0.00 5.01
459 460 5.067283 ACGTGTTTAAAAGAAAGATGTGGCT 59.933 36.000 0.00 0.00 0.00 4.75
460 461 6.261381 ACGTGTTTAAAAGAAAGATGTGGCTA 59.739 34.615 0.00 0.00 0.00 3.93
461 462 6.797033 CGTGTTTAAAAGAAAGATGTGGCTAG 59.203 38.462 0.00 0.00 0.00 3.42
462 463 6.582672 GTGTTTAAAAGAAAGATGTGGCTAGC 59.417 38.462 6.04 6.04 0.00 3.42
463 464 6.490040 TGTTTAAAAGAAAGATGTGGCTAGCT 59.510 34.615 15.72 0.00 0.00 3.32
464 465 7.014230 TGTTTAAAAGAAAGATGTGGCTAGCTT 59.986 33.333 15.72 0.00 0.00 3.74
465 466 7.524717 TTAAAAGAAAGATGTGGCTAGCTTT 57.475 32.000 15.72 5.86 33.62 3.51
466 467 6.410942 AAAAGAAAGATGTGGCTAGCTTTT 57.589 33.333 15.72 6.44 31.88 2.27
467 468 5.382618 AAGAAAGATGTGGCTAGCTTTTG 57.617 39.130 15.72 0.00 31.30 2.44
468 469 4.401925 AGAAAGATGTGGCTAGCTTTTGT 58.598 39.130 15.72 2.62 31.30 2.83
469 470 4.457257 AGAAAGATGTGGCTAGCTTTTGTC 59.543 41.667 15.72 7.07 31.30 3.18
470 471 3.710209 AGATGTGGCTAGCTTTTGTCT 57.290 42.857 15.72 9.19 0.00 3.41
471 472 4.826274 AGATGTGGCTAGCTTTTGTCTA 57.174 40.909 15.72 0.00 0.00 2.59
472 473 4.764172 AGATGTGGCTAGCTTTTGTCTAG 58.236 43.478 15.72 0.00 37.25 2.43
473 474 4.467795 AGATGTGGCTAGCTTTTGTCTAGA 59.532 41.667 15.72 0.00 36.50 2.43
474 475 4.826274 TGTGGCTAGCTTTTGTCTAGAT 57.174 40.909 15.72 0.00 36.50 1.98
475 476 4.507710 TGTGGCTAGCTTTTGTCTAGATG 58.492 43.478 15.72 0.00 36.50 2.90
476 477 4.222810 TGTGGCTAGCTTTTGTCTAGATGA 59.777 41.667 15.72 0.00 36.50 2.92
477 478 4.808364 GTGGCTAGCTTTTGTCTAGATGAG 59.192 45.833 15.72 0.00 36.50 2.90
478 479 4.711846 TGGCTAGCTTTTGTCTAGATGAGA 59.288 41.667 15.72 0.00 36.50 3.27
479 480 5.187772 TGGCTAGCTTTTGTCTAGATGAGAA 59.812 40.000 15.72 0.00 36.50 2.87
480 481 6.109359 GGCTAGCTTTTGTCTAGATGAGAAA 58.891 40.000 15.72 0.00 36.50 2.52
481 482 6.765512 GGCTAGCTTTTGTCTAGATGAGAAAT 59.234 38.462 15.72 0.00 37.69 2.17
482 483 7.928706 GGCTAGCTTTTGTCTAGATGAGAAATA 59.071 37.037 15.72 0.00 37.69 1.40
483 484 9.319143 GCTAGCTTTTGTCTAGATGAGAAATAA 57.681 33.333 7.70 0.00 37.69 1.40
485 486 8.499403 AGCTTTTGTCTAGATGAGAAATAACC 57.501 34.615 0.00 0.00 37.69 2.85
486 487 8.103305 AGCTTTTGTCTAGATGAGAAATAACCA 58.897 33.333 0.00 0.00 37.69 3.67
487 488 8.897752 GCTTTTGTCTAGATGAGAAATAACCAT 58.102 33.333 0.00 0.00 37.69 3.55
489 490 9.739276 TTTTGTCTAGATGAGAAATAACCATGT 57.261 29.630 0.00 0.00 37.69 3.21
490 491 8.948631 TTGTCTAGATGAGAAATAACCATGTC 57.051 34.615 0.00 0.00 35.37 3.06
491 492 8.311395 TGTCTAGATGAGAAATAACCATGTCT 57.689 34.615 0.00 0.00 35.37 3.41
492 493 8.417106 TGTCTAGATGAGAAATAACCATGTCTC 58.583 37.037 0.00 2.60 43.44 3.36
499 500 8.948631 TGAGAAATAACCATGTCTCATCTAAC 57.051 34.615 7.22 0.00 46.38 2.34
500 501 8.762645 TGAGAAATAACCATGTCTCATCTAACT 58.237 33.333 7.22 0.00 46.38 2.24
501 502 9.255304 GAGAAATAACCATGTCTCATCTAACTC 57.745 37.037 4.37 0.00 42.89 3.01
502 503 7.923344 AGAAATAACCATGTCTCATCTAACTCG 59.077 37.037 0.00 0.00 0.00 4.18
503 504 6.716934 ATAACCATGTCTCATCTAACTCGT 57.283 37.500 0.00 0.00 0.00 4.18
504 505 7.818997 ATAACCATGTCTCATCTAACTCGTA 57.181 36.000 0.00 0.00 0.00 3.43
505 506 5.502153 ACCATGTCTCATCTAACTCGTAC 57.498 43.478 0.00 0.00 0.00 3.67
506 507 4.035324 ACCATGTCTCATCTAACTCGTACG 59.965 45.833 9.53 9.53 0.00 3.67
507 508 3.670311 TGTCTCATCTAACTCGTACGC 57.330 47.619 11.24 0.00 0.00 4.42
508 509 2.353889 TGTCTCATCTAACTCGTACGCC 59.646 50.000 11.24 0.00 0.00 5.68
509 510 1.596260 TCTCATCTAACTCGTACGCCG 59.404 52.381 11.24 6.62 38.13 6.46
510 511 1.329906 CTCATCTAACTCGTACGCCGT 59.670 52.381 11.24 7.32 37.94 5.68
511 512 1.739466 TCATCTAACTCGTACGCCGTT 59.261 47.619 20.80 20.80 37.94 4.44
512 513 1.844357 CATCTAACTCGTACGCCGTTG 59.156 52.381 23.79 16.56 37.94 4.10
513 514 0.168788 TCTAACTCGTACGCCGTTGG 59.831 55.000 23.79 21.73 37.94 3.77
514 515 0.168788 CTAACTCGTACGCCGTTGGA 59.831 55.000 23.79 10.80 37.94 3.53
515 516 0.810648 TAACTCGTACGCCGTTGGAT 59.189 50.000 23.79 8.20 37.94 3.41
516 517 0.037975 AACTCGTACGCCGTTGGATT 60.038 50.000 17.84 0.00 37.94 3.01
517 518 0.037975 ACTCGTACGCCGTTGGATTT 60.038 50.000 11.24 0.00 37.94 2.17
518 519 1.073177 CTCGTACGCCGTTGGATTTT 58.927 50.000 11.24 0.00 37.94 1.82
519 520 2.261345 CTCGTACGCCGTTGGATTTTA 58.739 47.619 11.24 0.00 37.94 1.52
520 521 1.991965 TCGTACGCCGTTGGATTTTAC 59.008 47.619 11.24 0.00 37.94 2.01
521 522 1.266501 CGTACGCCGTTGGATTTTACG 60.267 52.381 0.52 0.00 37.50 3.18
522 523 0.720590 TACGCCGTTGGATTTTACGC 59.279 50.000 0.00 0.00 36.49 4.42
523 524 1.229315 ACGCCGTTGGATTTTACGCA 61.229 50.000 0.00 0.00 36.49 5.24
524 525 0.520412 CGCCGTTGGATTTTACGCAG 60.520 55.000 0.00 0.00 36.49 5.18
525 526 0.800012 GCCGTTGGATTTTACGCAGA 59.200 50.000 0.00 0.00 36.49 4.26
526 527 1.202031 GCCGTTGGATTTTACGCAGAG 60.202 52.381 0.00 0.00 36.49 3.35
527 528 2.343101 CCGTTGGATTTTACGCAGAGA 58.657 47.619 0.00 0.00 36.49 3.10
528 529 2.936498 CCGTTGGATTTTACGCAGAGAT 59.064 45.455 0.00 0.00 36.49 2.75
529 530 3.374058 CCGTTGGATTTTACGCAGAGATT 59.626 43.478 0.00 0.00 36.49 2.40
530 531 4.142687 CCGTTGGATTTTACGCAGAGATTT 60.143 41.667 0.00 0.00 36.49 2.17
531 532 4.788100 CGTTGGATTTTACGCAGAGATTTG 59.212 41.667 0.00 0.00 0.00 2.32
532 533 5.616866 CGTTGGATTTTACGCAGAGATTTGT 60.617 40.000 0.00 0.00 0.00 2.83
533 534 5.295431 TGGATTTTACGCAGAGATTTGTG 57.705 39.130 0.00 0.00 34.79 3.33
534 535 5.000591 TGGATTTTACGCAGAGATTTGTGA 58.999 37.500 0.00 0.00 32.97 3.58
535 536 5.122239 TGGATTTTACGCAGAGATTTGTGAG 59.878 40.000 0.00 0.00 32.97 3.51
536 537 5.447818 GGATTTTACGCAGAGATTTGTGAGG 60.448 44.000 0.00 0.00 32.97 3.86
537 538 3.953712 TTACGCAGAGATTTGTGAGGA 57.046 42.857 0.00 0.00 32.97 3.71
538 539 4.471904 TTACGCAGAGATTTGTGAGGAT 57.528 40.909 0.00 0.00 32.97 3.24
539 540 3.340814 ACGCAGAGATTTGTGAGGATT 57.659 42.857 0.00 0.00 32.97 3.01
540 541 3.679389 ACGCAGAGATTTGTGAGGATTT 58.321 40.909 0.00 0.00 32.97 2.17
541 542 4.074970 ACGCAGAGATTTGTGAGGATTTT 58.925 39.130 0.00 0.00 32.97 1.82
542 543 4.520492 ACGCAGAGATTTGTGAGGATTTTT 59.480 37.500 0.00 0.00 32.97 1.94
570 571 9.877222 TGGTCTGATTAGTCAAATAGTATAGGA 57.123 33.333 0.00 0.00 33.05 2.94
608 609 9.086758 ACGGGTAAAATAGTATATGAGTTAGCT 57.913 33.333 0.00 0.00 0.00 3.32
609 610 9.355215 CGGGTAAAATAGTATATGAGTTAGCTG 57.645 37.037 0.00 0.00 0.00 4.24
618 619 8.299990 AGTATATGAGTTAGCTGAGACTTTGT 57.700 34.615 0.00 0.00 0.00 2.83
619 620 8.754080 AGTATATGAGTTAGCTGAGACTTTGTT 58.246 33.333 0.00 0.00 0.00 2.83
622 623 6.406692 TGAGTTAGCTGAGACTTTGTTAGT 57.593 37.500 0.00 0.00 40.71 2.24
623 624 6.817184 TGAGTTAGCTGAGACTTTGTTAGTT 58.183 36.000 0.00 0.00 37.17 2.24
624 625 6.924060 TGAGTTAGCTGAGACTTTGTTAGTTC 59.076 38.462 0.00 0.00 37.17 3.01
625 626 7.056844 AGTTAGCTGAGACTTTGTTAGTTCT 57.943 36.000 0.00 0.00 37.17 3.01
626 627 7.149307 AGTTAGCTGAGACTTTGTTAGTTCTC 58.851 38.462 0.00 0.00 37.17 2.87
627 628 5.537300 AGCTGAGACTTTGTTAGTTCTCA 57.463 39.130 0.00 0.00 38.03 3.27
628 629 5.918608 AGCTGAGACTTTGTTAGTTCTCAA 58.081 37.500 2.08 0.00 38.93 3.02
629 630 6.349300 AGCTGAGACTTTGTTAGTTCTCAAA 58.651 36.000 2.08 0.00 38.93 2.69
630 631 6.995091 AGCTGAGACTTTGTTAGTTCTCAAAT 59.005 34.615 2.08 0.00 38.93 2.32
631 632 7.172361 AGCTGAGACTTTGTTAGTTCTCAAATC 59.828 37.037 2.08 0.00 38.93 2.17
632 633 7.572168 GCTGAGACTTTGTTAGTTCTCAAATCC 60.572 40.741 2.08 0.00 38.93 3.01
633 634 6.423905 TGAGACTTTGTTAGTTCTCAAATCCG 59.576 38.462 0.00 0.00 37.72 4.18
634 635 6.289064 AGACTTTGTTAGTTCTCAAATCCGT 58.711 36.000 0.00 0.00 37.17 4.69
635 636 7.439381 AGACTTTGTTAGTTCTCAAATCCGTA 58.561 34.615 0.00 0.00 37.17 4.02
636 637 7.929785 AGACTTTGTTAGTTCTCAAATCCGTAA 59.070 33.333 0.00 0.00 37.17 3.18
637 638 8.084590 ACTTTGTTAGTTCTCAAATCCGTAAG 57.915 34.615 0.00 0.00 31.29 2.34
638 639 7.929785 ACTTTGTTAGTTCTCAAATCCGTAAGA 59.070 33.333 0.00 0.00 33.30 2.10
639 640 8.842358 TTTGTTAGTTCTCAAATCCGTAAGAT 57.158 30.769 0.00 0.00 43.02 2.40
648 649 1.567504 ATCCGTAAGATTTGACGCGG 58.432 50.000 12.47 0.00 43.02 6.46
649 650 1.079875 TCCGTAAGATTTGACGCGGC 61.080 55.000 12.47 8.67 39.11 6.53
650 651 1.355796 CCGTAAGATTTGACGCGGCA 61.356 55.000 12.71 12.71 43.02 5.69
651 652 0.025001 CGTAAGATTTGACGCGGCAG 59.975 55.000 17.30 0.00 43.02 4.85
652 653 1.355971 GTAAGATTTGACGCGGCAGA 58.644 50.000 17.30 12.66 0.00 4.26
653 654 1.730064 GTAAGATTTGACGCGGCAGAA 59.270 47.619 17.30 13.50 0.00 3.02
654 655 1.234821 AAGATTTGACGCGGCAGAAA 58.765 45.000 17.30 8.48 0.00 2.52
655 656 1.234821 AGATTTGACGCGGCAGAAAA 58.765 45.000 17.30 7.55 0.00 2.29
656 657 1.069227 AGATTTGACGCGGCAGAAAAC 60.069 47.619 17.30 6.64 0.00 2.43
657 658 0.665835 ATTTGACGCGGCAGAAAACA 59.334 45.000 17.30 0.00 0.00 2.83
658 659 0.665835 TTTGACGCGGCAGAAAACAT 59.334 45.000 17.30 0.00 0.00 2.71
659 660 1.514003 TTGACGCGGCAGAAAACATA 58.486 45.000 17.30 0.00 0.00 2.29
660 661 1.732941 TGACGCGGCAGAAAACATAT 58.267 45.000 12.71 0.00 0.00 1.78
661 662 2.894902 TGACGCGGCAGAAAACATATA 58.105 42.857 12.71 0.00 0.00 0.86
662 663 3.462982 TGACGCGGCAGAAAACATATAT 58.537 40.909 12.71 0.00 0.00 0.86
663 664 4.623002 TGACGCGGCAGAAAACATATATA 58.377 39.130 12.71 0.00 0.00 0.86
664 665 4.446385 TGACGCGGCAGAAAACATATATAC 59.554 41.667 12.71 0.00 0.00 1.47
665 666 3.427528 ACGCGGCAGAAAACATATATACG 59.572 43.478 12.47 0.00 0.00 3.06
666 667 3.427528 CGCGGCAGAAAACATATATACGT 59.572 43.478 0.00 0.00 0.00 3.57
667 668 4.084745 CGCGGCAGAAAACATATATACGTT 60.085 41.667 0.00 0.00 0.00 3.99
668 669 5.137403 GCGGCAGAAAACATATATACGTTG 58.863 41.667 0.00 0.00 0.00 4.10
669 670 5.675970 CGGCAGAAAACATATATACGTTGG 58.324 41.667 0.00 0.00 0.00 3.77
732 733 1.927210 CGCGAAATCGGATCCACAG 59.073 57.895 13.41 0.00 40.23 3.66
733 734 0.527600 CGCGAAATCGGATCCACAGA 60.528 55.000 13.41 0.85 40.23 3.41
734 735 1.651987 GCGAAATCGGATCCACAGAA 58.348 50.000 13.41 0.00 40.23 3.02
736 737 2.223044 GCGAAATCGGATCCACAGAAAC 60.223 50.000 13.41 0.00 40.23 2.78
738 739 3.623060 CGAAATCGGATCCACAGAAACAT 59.377 43.478 13.41 0.00 35.37 2.71
739 740 4.094887 CGAAATCGGATCCACAGAAACATT 59.905 41.667 13.41 0.00 35.37 2.71
741 742 5.567138 AATCGGATCCACAGAAACATTTC 57.433 39.130 13.41 0.00 37.45 2.17
742 743 3.343617 TCGGATCCACAGAAACATTTCC 58.656 45.455 13.41 0.00 37.92 3.13
743 744 2.095853 CGGATCCACAGAAACATTTCCG 59.904 50.000 13.41 0.00 37.92 4.30
744 745 2.423538 GGATCCACAGAAACATTTCCGG 59.576 50.000 6.95 0.00 37.92 5.14
745 746 1.904287 TCCACAGAAACATTTCCGGG 58.096 50.000 0.00 0.00 37.92 5.73
746 747 0.243636 CCACAGAAACATTTCCGGGC 59.756 55.000 0.00 0.00 37.92 6.13
772 775 4.591852 GAGACATCGACCGCTACG 57.408 61.111 0.00 0.00 0.00 3.51
785 788 4.415332 CTACGCACGGCACCGAGT 62.415 66.667 17.40 14.22 42.83 4.18
786 789 4.710695 TACGCACGGCACCGAGTG 62.711 66.667 17.40 17.01 43.81 3.51
812 833 4.724697 CGCGCGCAACAGTCCAAG 62.725 66.667 32.61 6.38 0.00 3.61
813 834 4.389576 GCGCGCAACAGTCCAAGG 62.390 66.667 29.10 0.00 0.00 3.61
814 835 2.664851 CGCGCAACAGTCCAAGGA 60.665 61.111 8.75 0.00 0.00 3.36
828 849 3.240134 AAGGACACGCTGACCGCAT 62.240 57.895 0.00 0.00 41.76 4.73
874 895 3.292159 GCCGGACCAAAAAGGCGT 61.292 61.111 5.05 0.00 43.14 5.68
908 929 2.203153 CCCAATTACTCCGCCCCG 60.203 66.667 0.00 0.00 0.00 5.73
910 931 2.189521 CAATTACTCCGCCCCGCT 59.810 61.111 0.00 0.00 0.00 5.52
911 932 2.180204 CAATTACTCCGCCCCGCTG 61.180 63.158 0.00 0.00 0.00 5.18
912 933 4.547367 ATTACTCCGCCCCGCTGC 62.547 66.667 0.00 0.00 0.00 5.25
962 1003 4.659874 CACCGCGTCGCACCAAAC 62.660 66.667 18.75 0.00 0.00 2.93
965 1006 3.943034 CGCGTCGCACCAAACCAA 61.943 61.111 18.75 0.00 0.00 3.67
967 1008 1.942223 GCGTCGCACCAAACCAAAC 60.942 57.895 13.44 0.00 0.00 2.93
968 1009 1.298788 CGTCGCACCAAACCAAACC 60.299 57.895 0.00 0.00 0.00 3.27
969 1010 1.810532 GTCGCACCAAACCAAACCA 59.189 52.632 0.00 0.00 0.00 3.67
970 1011 0.248866 GTCGCACCAAACCAAACCAG 60.249 55.000 0.00 0.00 0.00 4.00
1000 1051 1.390125 CCACTCCCTCCCACTCTCT 59.610 63.158 0.00 0.00 0.00 3.10
1041 1092 2.683572 GCGGCCTTTTCCCCCAAT 60.684 61.111 0.00 0.00 0.00 3.16
1042 1093 2.290287 GCGGCCTTTTCCCCCAATT 61.290 57.895 0.00 0.00 0.00 2.32
1043 1094 1.897423 CGGCCTTTTCCCCCAATTC 59.103 57.895 0.00 0.00 0.00 2.17
1044 1095 0.614697 CGGCCTTTTCCCCCAATTCT 60.615 55.000 0.00 0.00 0.00 2.40
1045 1096 1.656587 GGCCTTTTCCCCCAATTCTT 58.343 50.000 0.00 0.00 0.00 2.52
1046 1097 1.985159 GGCCTTTTCCCCCAATTCTTT 59.015 47.619 0.00 0.00 0.00 2.52
1047 1098 2.375174 GGCCTTTTCCCCCAATTCTTTT 59.625 45.455 0.00 0.00 0.00 2.27
1048 1099 3.559171 GGCCTTTTCCCCCAATTCTTTTC 60.559 47.826 0.00 0.00 0.00 2.29
1049 1100 3.559171 GCCTTTTCCCCCAATTCTTTTCC 60.559 47.826 0.00 0.00 0.00 3.13
1050 1101 3.009033 CCTTTTCCCCCAATTCTTTTCCC 59.991 47.826 0.00 0.00 0.00 3.97
1051 1102 2.335681 TTCCCCCAATTCTTTTCCCC 57.664 50.000 0.00 0.00 0.00 4.81
1052 1103 1.478043 TCCCCCAATTCTTTTCCCCT 58.522 50.000 0.00 0.00 0.00 4.79
1053 1104 1.361197 TCCCCCAATTCTTTTCCCCTC 59.639 52.381 0.00 0.00 0.00 4.30
1054 1105 1.622449 CCCCCAATTCTTTTCCCCTCC 60.622 57.143 0.00 0.00 0.00 4.30
1055 1106 1.622449 CCCCAATTCTTTTCCCCTCCC 60.622 57.143 0.00 0.00 0.00 4.30
1056 1107 1.622449 CCCAATTCTTTTCCCCTCCCC 60.622 57.143 0.00 0.00 0.00 4.81
1536 1587 1.457079 CCCCACCCTCCTAGGTACG 60.457 68.421 9.08 0.00 38.39 3.67
1537 1588 1.309006 CCCACCCTCCTAGGTACGT 59.691 63.158 9.08 0.00 38.39 3.57
1538 1589 0.552848 CCCACCCTCCTAGGTACGTA 59.447 60.000 9.08 0.00 38.39 3.57
1539 1590 1.685148 CCACCCTCCTAGGTACGTAC 58.315 60.000 17.56 17.56 38.39 3.67
1540 1591 1.213926 CCACCCTCCTAGGTACGTACT 59.786 57.143 24.07 13.10 38.39 2.73
1541 1592 2.439507 CCACCCTCCTAGGTACGTACTA 59.560 54.545 24.07 13.49 38.39 1.82
1542 1593 3.471680 CACCCTCCTAGGTACGTACTAC 58.528 54.545 24.07 9.57 38.39 2.73
1543 1594 2.439880 ACCCTCCTAGGTACGTACTACC 59.560 54.545 24.07 11.75 45.19 3.18
1544 1595 2.224646 CCCTCCTAGGTACGTACTACCC 60.225 59.091 24.07 8.69 45.93 3.69
1545 1596 2.439507 CCTCCTAGGTACGTACTACCCA 59.560 54.545 24.07 0.00 45.93 4.51
1546 1597 3.073650 CCTCCTAGGTACGTACTACCCAT 59.926 52.174 24.07 7.34 45.93 4.00
1550 1601 2.659428 AGGTACGTACTACCCATCCAC 58.341 52.381 24.07 4.60 45.93 4.02
1617 1678 0.814010 ATATTCTTCCACCCGCACGC 60.814 55.000 0.00 0.00 0.00 5.34
1649 1711 1.969064 CGCACGGATTGGTTTGGGA 60.969 57.895 0.00 0.00 0.00 4.37
1706 1774 5.379706 AGCCAGCTAGGTTTGATCTAATT 57.620 39.130 0.00 0.00 40.61 1.40
1712 1780 8.153550 CCAGCTAGGTTTGATCTAATTATCTGT 58.846 37.037 0.00 0.00 0.00 3.41
1937 2011 1.597461 CGTCCTGGGGAAGAAGGTC 59.403 63.158 0.00 0.00 33.09 3.85
2229 2305 0.170561 GTCACTCGGTGATGCGTACT 59.829 55.000 9.47 0.00 44.63 2.73
2309 2385 4.694509 CCATTCAGCAGACCTATAATGAGC 59.305 45.833 0.00 0.00 32.10 4.26
2321 2397 1.022451 TAATGAGCGCCGAACCAACC 61.022 55.000 2.29 0.00 0.00 3.77
2457 2533 3.272574 CTGTAAGATCCCACACAGCAT 57.727 47.619 0.00 0.00 34.07 3.79
2499 2575 6.320164 TCTTTTAGCTTTCTGTTGTTGCCTAA 59.680 34.615 0.00 0.00 0.00 2.69
2595 2671 7.849804 ATTCACCAGACTAAATGTGTATCAC 57.150 36.000 0.00 0.00 34.56 3.06
2608 2685 2.733026 GTGTATCACGGCGTACTGTTTT 59.267 45.455 14.22 0.00 31.05 2.43
2609 2686 3.184986 GTGTATCACGGCGTACTGTTTTT 59.815 43.478 14.22 0.00 31.05 1.94
2775 2857 0.878416 TTTGCTGGTGATGGTAACGC 59.122 50.000 0.00 0.00 42.51 4.84
2833 2915 4.520492 GTCAGTGGTTTTGGATTCTCACAT 59.480 41.667 0.00 0.00 0.00 3.21
2985 3069 2.915349 AGCTGTGTCTATGGCTCATTG 58.085 47.619 0.00 0.00 0.00 2.82
3215 3301 7.472543 CCACTTGTTTTCTTGGCTGTATATAC 58.527 38.462 5.89 5.89 0.00 1.47
3416 3505 1.064979 ACCAAACCAGTCGAAGTTGGT 60.065 47.619 10.74 10.74 45.21 3.67
3428 3517 2.549754 CGAAGTTGGTTCACTCAGCATT 59.450 45.455 0.00 0.00 34.44 3.56
3455 3544 4.772100 TGGAAGGGTGATTTTGATTTCTCC 59.228 41.667 0.00 0.00 0.00 3.71
3469 3558 6.474140 TGATTTCTCCGCTGTAGGTAAATA 57.526 37.500 0.00 0.00 32.40 1.40
3577 3669 2.616330 CCAAGAAGCAGCGCGGAAA 61.616 57.895 13.03 0.00 0.00 3.13
3637 3729 2.828549 GTCCGCCGGCATTTCCAT 60.829 61.111 28.98 0.00 34.01 3.41
3864 3956 2.256461 CGCCTGCAGCAGTTTTCC 59.744 61.111 21.26 3.34 44.04 3.13
4046 4139 4.746535 GGAACCTCTTCTTCCTTCCTAG 57.253 50.000 0.00 0.00 35.23 3.02
4107 4205 3.615496 ACCGTAAATTGATTCGTTCTCGG 59.385 43.478 0.00 0.00 40.00 4.63
4272 4371 7.851228 TGTCTGTAACTGATATGTTCATCCTT 58.149 34.615 0.00 0.00 32.72 3.36
4277 4376 5.456921 ACTGATATGTTCATCCTTTGGGT 57.543 39.130 0.00 0.00 32.72 4.51
4298 4397 1.271656 GTGTCAGGTAACGCCACTAGT 59.728 52.381 0.00 0.00 46.39 2.57
4323 4422 2.567985 TGAAAAAGAGGGGAACACGAC 58.432 47.619 0.00 0.00 0.00 4.34
4329 4428 3.998672 GGGGAACACGACCAGCGA 61.999 66.667 0.00 0.00 44.57 4.93
4342 4452 2.079158 ACCAGCGAACTTGATGATGTG 58.921 47.619 0.00 0.00 0.00 3.21
4385 4495 6.395426 TTTGAAGTTCTGAACTACGGAGTA 57.605 37.500 22.30 3.59 45.11 2.59
4412 4576 1.710816 AAATTTCCGGCAGAACCCAA 58.289 45.000 0.00 0.00 32.95 4.12
4413 4577 1.256812 AATTTCCGGCAGAACCCAAG 58.743 50.000 0.00 0.00 32.95 3.61
4414 4578 1.250840 ATTTCCGGCAGAACCCAAGC 61.251 55.000 0.00 0.00 32.95 4.01
4415 4579 2.351924 TTTCCGGCAGAACCCAAGCT 62.352 55.000 0.00 0.00 32.95 3.74
4416 4580 1.485294 TTCCGGCAGAACCCAAGCTA 61.485 55.000 0.00 0.00 33.26 3.32
4417 4581 1.002624 CCGGCAGAACCCAAGCTAA 60.003 57.895 0.00 0.00 33.26 3.09
4418 4582 0.394352 CCGGCAGAACCCAAGCTAAT 60.394 55.000 0.00 0.00 33.26 1.73
4419 4583 1.134220 CCGGCAGAACCCAAGCTAATA 60.134 52.381 0.00 0.00 33.26 0.98
4529 4939 5.009210 GGTGTTGTCCTAGTAATGTGCAAAA 59.991 40.000 0.00 0.00 0.00 2.44
4581 4991 7.778470 AGGAGAAGCTCTTAACAATTTATCG 57.222 36.000 0.00 0.00 0.00 2.92
4591 5001 8.958175 TCTTAACAATTTATCGCGTCATTTTT 57.042 26.923 5.77 2.93 0.00 1.94
4615 5025 5.289917 TGTTGAAACAAATATCGCGTCAT 57.710 34.783 5.77 0.00 35.67 3.06
4616 5026 5.694816 TGTTGAAACAAATATCGCGTCATT 58.305 33.333 5.77 3.91 35.67 2.57
4617 5027 6.146216 TGTTGAAACAAATATCGCGTCATTT 58.854 32.000 5.77 10.27 35.67 2.32
4618 5028 6.638873 TGTTGAAACAAATATCGCGTCATTTT 59.361 30.769 5.77 0.00 35.67 1.82
4619 5029 6.846870 TGAAACAAATATCGCGTCATTTTC 57.153 33.333 5.77 8.33 0.00 2.29
4622 5032 8.231161 TGAAACAAATATCGCGTCATTTTCTTA 58.769 29.630 5.77 0.00 0.00 2.10
4648 5077 9.665719 ATTACTGAAAAAGTTGTGGAAATTGTT 57.334 25.926 0.00 0.00 40.56 2.83
4713 5142 2.956964 CCCGCGCTCGTCTTCATC 60.957 66.667 5.56 0.00 0.00 2.92
5047 5481 5.832539 ACTGACTCCCCATTTCTATATGG 57.167 43.478 0.00 0.00 43.90 2.74
5089 5523 3.655486 TCCGTTGAATCGCTCAGTTAAA 58.345 40.909 0.00 0.00 34.81 1.52
5097 5531 4.606457 ATCGCTCAGTTAAATTCACTGC 57.394 40.909 11.34 2.73 41.37 4.40
5126 5560 1.134670 CCAGCCTTCAGTAGCCAGTAC 60.135 57.143 0.00 0.00 0.00 2.73
5147 5581 3.143675 GCACATGGCTCTTTCTCGA 57.856 52.632 0.00 0.00 40.25 4.04
5148 5582 1.442769 GCACATGGCTCTTTCTCGAA 58.557 50.000 0.00 0.00 40.25 3.71
5149 5583 2.012673 GCACATGGCTCTTTCTCGAAT 58.987 47.619 0.00 0.00 40.25 3.34
5150 5584 3.198068 GCACATGGCTCTTTCTCGAATA 58.802 45.455 0.00 0.00 40.25 1.75
5151 5585 3.623060 GCACATGGCTCTTTCTCGAATAA 59.377 43.478 0.00 0.00 40.25 1.40
5152 5586 4.260538 GCACATGGCTCTTTCTCGAATAAG 60.261 45.833 0.00 0.00 40.25 1.73
5153 5587 3.873952 ACATGGCTCTTTCTCGAATAAGC 59.126 43.478 0.00 5.64 0.00 3.09
5154 5588 3.610040 TGGCTCTTTCTCGAATAAGCA 57.390 42.857 12.73 0.00 32.87 3.91
5155 5589 4.142609 TGGCTCTTTCTCGAATAAGCAT 57.857 40.909 12.73 0.00 32.87 3.79
5156 5590 3.873361 TGGCTCTTTCTCGAATAAGCATG 59.127 43.478 12.73 0.00 32.87 4.06
5157 5591 4.122776 GGCTCTTTCTCGAATAAGCATGA 58.877 43.478 0.00 0.00 32.87 3.07
5158 5592 4.754114 GGCTCTTTCTCGAATAAGCATGAT 59.246 41.667 0.00 0.00 32.87 2.45
5159 5593 5.107143 GGCTCTTTCTCGAATAAGCATGATC 60.107 44.000 0.00 0.00 32.87 2.92
5160 5594 5.695816 GCTCTTTCTCGAATAAGCATGATCT 59.304 40.000 0.00 0.00 32.07 2.75
5161 5595 6.865726 GCTCTTTCTCGAATAAGCATGATCTA 59.134 38.462 0.00 0.00 32.07 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.079127 TACAGGCCGAAGAGCTTGC 60.079 57.895 0.00 0.00 43.20 4.01
1 2 0.460987 CCTACAGGCCGAAGAGCTTG 60.461 60.000 0.00 0.00 44.81 4.01
2 3 1.901085 CCTACAGGCCGAAGAGCTT 59.099 57.895 0.00 0.00 0.00 3.74
3 4 3.622514 CCTACAGGCCGAAGAGCT 58.377 61.111 0.00 0.00 0.00 4.09
13 14 4.393155 TGCTGCCACGCCTACAGG 62.393 66.667 0.00 0.00 38.53 4.00
14 15 2.816958 CTGCTGCCACGCCTACAG 60.817 66.667 0.00 0.00 34.48 2.74
17 18 3.626996 ATTGCTGCTGCCACGCCTA 62.627 57.895 13.47 0.00 38.71 3.93
19 20 3.578515 AAATTGCTGCTGCCACGCC 62.579 57.895 13.47 0.00 38.71 5.68
20 21 1.223417 AAAAATTGCTGCTGCCACGC 61.223 50.000 13.47 0.00 38.71 5.34
21 22 2.903284 AAAAATTGCTGCTGCCACG 58.097 47.368 13.47 0.00 38.71 4.94
39 40 9.581289 TCAAAACATGATCTACTAAAAGGGAAA 57.419 29.630 0.00 0.00 31.50 3.13
40 41 9.581289 TTCAAAACATGATCTACTAAAAGGGAA 57.419 29.630 0.00 0.00 38.03 3.97
41 42 9.753674 ATTCAAAACATGATCTACTAAAAGGGA 57.246 29.630 0.00 0.00 38.03 4.20
52 53 9.932207 TCTTTTTGCATATTCAAAACATGATCT 57.068 25.926 12.02 0.00 43.24 2.75
53 54 9.962759 GTCTTTTTGCATATTCAAAACATGATC 57.037 29.630 12.02 0.00 43.24 2.92
54 55 8.938906 GGTCTTTTTGCATATTCAAAACATGAT 58.061 29.630 12.02 0.00 43.24 2.45
55 56 7.116090 CGGTCTTTTTGCATATTCAAAACATGA 59.884 33.333 12.02 8.64 43.24 3.07
56 57 7.228840 CGGTCTTTTTGCATATTCAAAACATG 58.771 34.615 12.02 6.84 43.24 3.21
57 58 6.128580 GCGGTCTTTTTGCATATTCAAAACAT 60.129 34.615 12.02 0.00 43.24 2.71
58 59 5.176590 GCGGTCTTTTTGCATATTCAAAACA 59.823 36.000 12.02 1.10 43.24 2.83
59 60 5.176590 TGCGGTCTTTTTGCATATTCAAAAC 59.823 36.000 12.02 3.32 43.24 2.43
60 61 5.292765 TGCGGTCTTTTTGCATATTCAAAA 58.707 33.333 8.88 8.88 42.25 2.44
61 62 4.876125 TGCGGTCTTTTTGCATATTCAAA 58.124 34.783 0.00 0.00 32.86 2.69
62 63 4.217334 TCTGCGGTCTTTTTGCATATTCAA 59.783 37.500 0.00 0.00 38.07 2.69
63 64 3.755905 TCTGCGGTCTTTTTGCATATTCA 59.244 39.130 0.00 0.00 38.07 2.57
64 65 4.355543 TCTGCGGTCTTTTTGCATATTC 57.644 40.909 0.00 0.00 38.07 1.75
65 66 4.485163 GTTCTGCGGTCTTTTTGCATATT 58.515 39.130 0.00 0.00 38.07 1.28
66 67 3.426159 CGTTCTGCGGTCTTTTTGCATAT 60.426 43.478 0.00 0.00 38.07 1.78
67 68 2.095969 CGTTCTGCGGTCTTTTTGCATA 60.096 45.455 0.00 0.00 38.07 3.14
68 69 1.334960 CGTTCTGCGGTCTTTTTGCAT 60.335 47.619 0.00 0.00 38.07 3.96
69 70 0.028770 CGTTCTGCGGTCTTTTTGCA 59.971 50.000 0.00 0.00 36.85 4.08
70 71 1.268778 GCGTTCTGCGGTCTTTTTGC 61.269 55.000 0.00 0.00 41.69 3.68
71 72 2.783440 GCGTTCTGCGGTCTTTTTG 58.217 52.632 0.00 0.00 41.69 2.44
81 82 1.194772 GGCGATATTTAGGCGTTCTGC 59.805 52.381 0.00 0.00 45.38 4.26
88 89 5.109903 ACATAGATTCGGCGATATTTAGGC 58.890 41.667 11.76 0.00 0.00 3.93
89 90 5.455849 CGACATAGATTCGGCGATATTTAGG 59.544 44.000 11.76 10.78 32.66 2.69
90 91 6.021390 CACGACATAGATTCGGCGATATTTAG 60.021 42.308 11.76 2.24 40.92 1.85
91 92 5.798434 CACGACATAGATTCGGCGATATTTA 59.202 40.000 11.76 7.51 40.92 1.40
92 93 4.621460 CACGACATAGATTCGGCGATATTT 59.379 41.667 11.76 5.45 40.92 1.40
93 94 4.166523 CACGACATAGATTCGGCGATATT 58.833 43.478 11.76 1.20 40.92 1.28
94 95 3.190744 ACACGACATAGATTCGGCGATAT 59.809 43.478 11.76 7.38 40.92 1.63
95 96 2.551032 ACACGACATAGATTCGGCGATA 59.449 45.455 11.76 0.00 40.92 2.92
96 97 1.337071 ACACGACATAGATTCGGCGAT 59.663 47.619 11.76 0.10 40.92 4.58
97 98 0.736636 ACACGACATAGATTCGGCGA 59.263 50.000 4.99 4.99 40.92 5.54
98 99 1.556564 AACACGACATAGATTCGGCG 58.443 50.000 0.00 0.00 40.92 6.46
99 100 2.536928 GCAAACACGACATAGATTCGGC 60.537 50.000 0.00 0.00 40.92 5.54
100 101 2.030457 GGCAAACACGACATAGATTCGG 59.970 50.000 0.00 0.00 40.92 4.30
101 102 2.285026 CGGCAAACACGACATAGATTCG 60.285 50.000 0.00 0.00 42.36 3.34
102 103 2.927477 TCGGCAAACACGACATAGATTC 59.073 45.455 0.00 0.00 35.12 2.52
103 104 2.967362 TCGGCAAACACGACATAGATT 58.033 42.857 0.00 0.00 35.12 2.40
104 105 2.665649 TCGGCAAACACGACATAGAT 57.334 45.000 0.00 0.00 35.12 1.98
105 106 2.333926 CTTCGGCAAACACGACATAGA 58.666 47.619 0.00 0.00 40.45 1.98
106 107 1.393539 CCTTCGGCAAACACGACATAG 59.606 52.381 0.00 0.00 40.45 2.23
107 108 1.270412 ACCTTCGGCAAACACGACATA 60.270 47.619 0.00 0.00 40.45 2.29
108 109 0.534203 ACCTTCGGCAAACACGACAT 60.534 50.000 0.00 0.00 40.45 3.06
109 110 0.745128 AACCTTCGGCAAACACGACA 60.745 50.000 0.00 0.00 40.45 4.35
110 111 0.316689 CAACCTTCGGCAAACACGAC 60.317 55.000 0.00 0.00 40.45 4.34
111 112 1.440938 CCAACCTTCGGCAAACACGA 61.441 55.000 0.00 0.00 38.78 4.35
112 113 1.008995 CCAACCTTCGGCAAACACG 60.009 57.895 0.00 0.00 0.00 4.49
120 121 0.601057 AAAATTCGGCCAACCTTCGG 59.399 50.000 2.24 0.00 0.00 4.30
121 122 1.668628 CCAAAATTCGGCCAACCTTCG 60.669 52.381 2.24 0.00 0.00 3.79
122 123 1.616374 TCCAAAATTCGGCCAACCTTC 59.384 47.619 2.24 0.00 0.00 3.46
123 124 1.710816 TCCAAAATTCGGCCAACCTT 58.289 45.000 2.24 0.00 0.00 3.50
124 125 1.550072 CATCCAAAATTCGGCCAACCT 59.450 47.619 2.24 0.00 0.00 3.50
125 126 1.548269 TCATCCAAAATTCGGCCAACC 59.452 47.619 2.24 0.00 0.00 3.77
126 127 2.231235 ACTCATCCAAAATTCGGCCAAC 59.769 45.455 2.24 0.00 0.00 3.77
127 128 2.524306 ACTCATCCAAAATTCGGCCAA 58.476 42.857 2.24 0.00 0.00 4.52
128 129 2.214376 ACTCATCCAAAATTCGGCCA 57.786 45.000 2.24 0.00 0.00 5.36
129 130 3.632145 ACATACTCATCCAAAATTCGGCC 59.368 43.478 0.00 0.00 0.00 6.13
130 131 4.900635 ACATACTCATCCAAAATTCGGC 57.099 40.909 0.00 0.00 0.00 5.54
131 132 9.632807 TTAAAAACATACTCATCCAAAATTCGG 57.367 29.630 0.00 0.00 0.00 4.30
155 156 9.596677 CCTGTCGACGTTTTGTAAATATTTTTA 57.403 29.630 11.62 0.00 0.00 1.52
156 157 7.592164 CCCTGTCGACGTTTTGTAAATATTTTT 59.408 33.333 11.62 0.00 0.00 1.94
157 158 7.079475 CCCTGTCGACGTTTTGTAAATATTTT 58.921 34.615 11.62 0.00 0.00 1.82
158 159 6.348704 CCCCTGTCGACGTTTTGTAAATATTT 60.349 38.462 11.62 5.89 0.00 1.40
159 160 5.122711 CCCCTGTCGACGTTTTGTAAATATT 59.877 40.000 11.62 0.00 0.00 1.28
160 161 4.632688 CCCCTGTCGACGTTTTGTAAATAT 59.367 41.667 11.62 0.00 0.00 1.28
161 162 3.995705 CCCCTGTCGACGTTTTGTAAATA 59.004 43.478 11.62 0.00 0.00 1.40
162 163 2.809696 CCCCTGTCGACGTTTTGTAAAT 59.190 45.455 11.62 0.00 0.00 1.40
163 164 2.211806 CCCCTGTCGACGTTTTGTAAA 58.788 47.619 11.62 0.00 0.00 2.01
164 165 1.540797 CCCCCTGTCGACGTTTTGTAA 60.541 52.381 11.62 0.00 0.00 2.41
165 166 0.033781 CCCCCTGTCGACGTTTTGTA 59.966 55.000 11.62 0.00 0.00 2.41
166 167 1.227734 CCCCCTGTCGACGTTTTGT 60.228 57.895 11.62 0.00 0.00 2.83
167 168 2.613506 GCCCCCTGTCGACGTTTTG 61.614 63.158 11.62 0.38 0.00 2.44
168 169 2.281276 GCCCCCTGTCGACGTTTT 60.281 61.111 11.62 0.00 0.00 2.43
169 170 4.675029 CGCCCCCTGTCGACGTTT 62.675 66.667 11.62 0.00 0.00 3.60
196 197 4.115199 ATCGGGTTCCCAGCTGCC 62.115 66.667 8.66 3.56 0.00 4.85
197 198 2.514824 GATCGGGTTCCCAGCTGC 60.515 66.667 8.66 0.00 0.00 5.25
198 199 2.202932 CGATCGGGTTCCCAGCTG 60.203 66.667 6.78 6.78 0.00 4.24
199 200 4.162690 GCGATCGGGTTCCCAGCT 62.163 66.667 18.30 0.00 0.00 4.24
201 202 4.547367 GGGCGATCGGGTTCCCAG 62.547 72.222 19.95 1.53 38.62 4.45
203 204 4.237207 GAGGGCGATCGGGTTCCC 62.237 72.222 18.30 18.07 39.05 3.97
204 205 3.467226 TGAGGGCGATCGGGTTCC 61.467 66.667 18.30 9.14 0.00 3.62
205 206 2.202892 GTGAGGGCGATCGGGTTC 60.203 66.667 18.30 0.00 0.00 3.62
206 207 4.143333 CGTGAGGGCGATCGGGTT 62.143 66.667 18.30 0.00 0.00 4.11
215 216 0.586802 GATAATTTCGGCGTGAGGGC 59.413 55.000 6.85 0.00 37.98 5.19
216 217 0.859232 CGATAATTTCGGCGTGAGGG 59.141 55.000 6.85 0.00 44.28 4.30
225 226 4.998883 GGGCAAACCGGCGATAATTTCG 62.999 54.545 9.30 5.89 43.77 3.46
226 227 1.535226 GGGCAAACCGGCGATAATTTC 60.535 52.381 9.30 0.00 42.43 2.17
227 228 0.458260 GGGCAAACCGGCGATAATTT 59.542 50.000 9.30 0.06 42.43 1.82
228 229 1.388837 GGGGCAAACCGGCGATAATT 61.389 55.000 9.30 0.00 42.43 1.40
229 230 1.826487 GGGGCAAACCGGCGATAAT 60.826 57.895 9.30 0.00 42.43 1.28
230 231 2.438795 GGGGCAAACCGGCGATAA 60.439 61.111 9.30 0.00 42.43 1.75
231 232 4.493049 GGGGGCAAACCGGCGATA 62.493 66.667 9.30 0.00 42.43 2.92
245 246 3.400599 AAATAGCGACGCCCTGGGG 62.401 63.158 17.79 7.28 38.57 4.96
246 247 1.887707 GAAATAGCGACGCCCTGGG 60.888 63.158 17.79 8.86 0.00 4.45
247 248 1.887707 GGAAATAGCGACGCCCTGG 60.888 63.158 17.79 0.00 0.00 4.45
248 249 1.153449 TGGAAATAGCGACGCCCTG 60.153 57.895 17.79 0.00 0.00 4.45
249 250 1.144057 CTGGAAATAGCGACGCCCT 59.856 57.895 17.79 0.65 0.00 5.19
250 251 2.534903 GCTGGAAATAGCGACGCCC 61.535 63.158 17.79 10.76 33.46 6.13
251 252 2.534903 GGCTGGAAATAGCGACGCC 61.535 63.158 17.79 0.00 44.60 5.68
252 253 2.534903 GGGCTGGAAATAGCGACGC 61.535 63.158 13.03 13.03 44.60 5.19
253 254 1.887707 GGGGCTGGAAATAGCGACG 60.888 63.158 0.00 0.00 44.60 5.12
254 255 0.815615 CAGGGGCTGGAAATAGCGAC 60.816 60.000 0.00 0.00 44.60 5.19
255 256 1.526887 CAGGGGCTGGAAATAGCGA 59.473 57.895 0.00 0.00 44.60 4.93
256 257 4.147701 CAGGGGCTGGAAATAGCG 57.852 61.111 0.00 0.00 44.60 4.26
278 279 2.892425 GCATCTCCAGCCGTTCGG 60.892 66.667 6.90 6.90 0.00 4.30
279 280 1.880340 GAGCATCTCCAGCCGTTCG 60.880 63.158 0.00 0.00 0.00 3.95
280 281 4.116878 GAGCATCTCCAGCCGTTC 57.883 61.111 0.00 0.00 0.00 3.95
291 292 3.496130 CCACAAACGGATCATAGAGCATC 59.504 47.826 0.00 0.00 0.00 3.91
292 293 3.118261 ACCACAAACGGATCATAGAGCAT 60.118 43.478 0.00 0.00 0.00 3.79
293 294 2.236146 ACCACAAACGGATCATAGAGCA 59.764 45.455 0.00 0.00 0.00 4.26
294 295 2.609459 CACCACAAACGGATCATAGAGC 59.391 50.000 0.00 0.00 0.00 4.09
295 296 3.198068 CCACCACAAACGGATCATAGAG 58.802 50.000 0.00 0.00 0.00 2.43
296 297 2.679639 GCCACCACAAACGGATCATAGA 60.680 50.000 0.00 0.00 0.00 1.98
297 298 1.670811 GCCACCACAAACGGATCATAG 59.329 52.381 0.00 0.00 0.00 2.23
298 299 1.280710 AGCCACCACAAACGGATCATA 59.719 47.619 0.00 0.00 0.00 2.15
299 300 0.038166 AGCCACCACAAACGGATCAT 59.962 50.000 0.00 0.00 0.00 2.45
300 301 0.179004 AAGCCACCACAAACGGATCA 60.179 50.000 0.00 0.00 0.00 2.92
301 302 0.958822 AAAGCCACCACAAACGGATC 59.041 50.000 0.00 0.00 0.00 3.36
302 303 0.673437 CAAAGCCACCACAAACGGAT 59.327 50.000 0.00 0.00 0.00 4.18
303 304 0.681564 ACAAAGCCACCACAAACGGA 60.682 50.000 0.00 0.00 0.00 4.69
304 305 0.248866 GACAAAGCCACCACAAACGG 60.249 55.000 0.00 0.00 0.00 4.44
305 306 0.591236 CGACAAAGCCACCACAAACG 60.591 55.000 0.00 0.00 0.00 3.60
306 307 0.736053 TCGACAAAGCCACCACAAAC 59.264 50.000 0.00 0.00 0.00 2.93
307 308 1.606668 GATCGACAAAGCCACCACAAA 59.393 47.619 0.00 0.00 0.00 2.83
308 309 1.202758 AGATCGACAAAGCCACCACAA 60.203 47.619 0.00 0.00 0.00 3.33
309 310 0.396435 AGATCGACAAAGCCACCACA 59.604 50.000 0.00 0.00 0.00 4.17
310 311 1.079503 GAGATCGACAAAGCCACCAC 58.920 55.000 0.00 0.00 0.00 4.16
311 312 0.684535 TGAGATCGACAAAGCCACCA 59.315 50.000 0.00 0.00 0.00 4.17
312 313 1.734465 CTTGAGATCGACAAAGCCACC 59.266 52.381 9.02 0.00 0.00 4.61
313 314 2.688507 TCTTGAGATCGACAAAGCCAC 58.311 47.619 9.02 0.00 0.00 5.01
314 315 3.616956 ATCTTGAGATCGACAAAGCCA 57.383 42.857 9.02 0.00 0.00 4.75
315 316 4.656041 CAAATCTTGAGATCGACAAAGCC 58.344 43.478 9.02 0.00 32.75 4.35
316 317 4.094212 GCAAATCTTGAGATCGACAAAGC 58.906 43.478 9.02 5.83 32.75 3.51
317 318 5.322310 CAGCAAATCTTGAGATCGACAAAG 58.678 41.667 9.02 2.75 32.75 2.77
318 319 4.154737 CCAGCAAATCTTGAGATCGACAAA 59.845 41.667 9.02 3.06 32.75 2.83
319 320 3.686241 CCAGCAAATCTTGAGATCGACAA 59.314 43.478 0.00 7.81 32.75 3.18
320 321 3.264947 CCAGCAAATCTTGAGATCGACA 58.735 45.455 0.00 0.00 32.75 4.35
321 322 2.031437 GCCAGCAAATCTTGAGATCGAC 59.969 50.000 0.00 0.00 32.75 4.20
322 323 2.093288 AGCCAGCAAATCTTGAGATCGA 60.093 45.455 0.00 0.00 32.75 3.59
323 324 2.286872 AGCCAGCAAATCTTGAGATCG 58.713 47.619 0.00 0.00 32.75 3.69
324 325 4.036144 GGTAAGCCAGCAAATCTTGAGATC 59.964 45.833 0.00 0.00 32.29 2.75
325 326 3.950395 GGTAAGCCAGCAAATCTTGAGAT 59.050 43.478 0.00 0.00 33.43 2.75
326 327 3.347216 GGTAAGCCAGCAAATCTTGAGA 58.653 45.455 0.00 0.00 34.09 3.27
327 328 2.424956 GGGTAAGCCAGCAAATCTTGAG 59.575 50.000 0.00 0.00 36.17 3.02
328 329 2.041620 AGGGTAAGCCAGCAAATCTTGA 59.958 45.455 0.00 0.00 36.17 3.02
329 330 2.450476 AGGGTAAGCCAGCAAATCTTG 58.550 47.619 0.00 0.00 36.17 3.02
330 331 2.907458 AGGGTAAGCCAGCAAATCTT 57.093 45.000 0.00 0.00 36.17 2.40
331 332 3.495100 CGATAGGGTAAGCCAGCAAATCT 60.495 47.826 0.00 0.00 36.17 2.40
332 333 2.808543 CGATAGGGTAAGCCAGCAAATC 59.191 50.000 0.00 0.00 36.17 2.17
333 334 2.438021 TCGATAGGGTAAGCCAGCAAAT 59.562 45.455 0.00 0.00 36.17 2.32
334 335 1.834896 TCGATAGGGTAAGCCAGCAAA 59.165 47.619 0.00 0.00 36.17 3.68
335 336 1.491668 TCGATAGGGTAAGCCAGCAA 58.508 50.000 0.00 0.00 36.17 3.91
336 337 1.412710 CTTCGATAGGGTAAGCCAGCA 59.587 52.381 0.00 0.00 36.17 4.41
337 338 1.270358 CCTTCGATAGGGTAAGCCAGC 60.270 57.143 5.92 0.00 40.67 4.85
338 339 2.821991 CCTTCGATAGGGTAAGCCAG 57.178 55.000 5.92 0.00 40.67 4.85
348 349 2.287069 CCTGTACGAGCACCTTCGATAG 60.287 54.545 2.12 0.00 43.03 2.08
349 350 1.674441 CCTGTACGAGCACCTTCGATA 59.326 52.381 2.12 0.00 43.03 2.92
350 351 0.456221 CCTGTACGAGCACCTTCGAT 59.544 55.000 2.12 0.00 43.03 3.59
351 352 0.892358 ACCTGTACGAGCACCTTCGA 60.892 55.000 2.12 0.00 43.03 3.71
352 353 0.732880 CACCTGTACGAGCACCTTCG 60.733 60.000 0.00 0.00 45.70 3.79
353 354 0.389948 CCACCTGTACGAGCACCTTC 60.390 60.000 0.00 0.00 0.00 3.46
354 355 0.830444 TCCACCTGTACGAGCACCTT 60.830 55.000 0.00 0.00 0.00 3.50
355 356 1.228769 TCCACCTGTACGAGCACCT 60.229 57.895 0.00 0.00 0.00 4.00
356 357 1.215647 CTCCACCTGTACGAGCACC 59.784 63.158 0.00 0.00 0.00 5.01
357 358 0.388649 CACTCCACCTGTACGAGCAC 60.389 60.000 0.00 0.00 0.00 4.40
358 359 0.826256 ACACTCCACCTGTACGAGCA 60.826 55.000 0.00 0.00 0.00 4.26
359 360 0.388649 CACACTCCACCTGTACGAGC 60.389 60.000 0.00 0.00 0.00 5.03
360 361 0.388649 GCACACTCCACCTGTACGAG 60.389 60.000 0.00 0.00 0.00 4.18
361 362 1.663739 GCACACTCCACCTGTACGA 59.336 57.895 0.00 0.00 0.00 3.43
362 363 1.733041 CGCACACTCCACCTGTACG 60.733 63.158 0.00 0.00 0.00 3.67
363 364 0.944311 CACGCACACTCCACCTGTAC 60.944 60.000 0.00 0.00 0.00 2.90
364 365 1.365999 CACGCACACTCCACCTGTA 59.634 57.895 0.00 0.00 0.00 2.74
365 366 2.108976 CACGCACACTCCACCTGT 59.891 61.111 0.00 0.00 0.00 4.00
366 367 2.108976 ACACGCACACTCCACCTG 59.891 61.111 0.00 0.00 0.00 4.00
367 368 2.108976 CACACGCACACTCCACCT 59.891 61.111 0.00 0.00 0.00 4.00
368 369 1.956170 CTCACACGCACACTCCACC 60.956 63.158 0.00 0.00 0.00 4.61
369 370 1.227263 ACTCACACGCACACTCCAC 60.227 57.895 0.00 0.00 0.00 4.02
370 371 1.227234 CACTCACACGCACACTCCA 60.227 57.895 0.00 0.00 0.00 3.86
371 372 0.810031 AACACTCACACGCACACTCC 60.810 55.000 0.00 0.00 0.00 3.85
372 373 0.577269 GAACACTCACACGCACACTC 59.423 55.000 0.00 0.00 0.00 3.51
373 374 0.108377 TGAACACTCACACGCACACT 60.108 50.000 0.00 0.00 0.00 3.55
374 375 2.379054 TGAACACTCACACGCACAC 58.621 52.632 0.00 0.00 0.00 3.82
375 376 4.921834 TGAACACTCACACGCACA 57.078 50.000 0.00 0.00 0.00 4.57
383 384 2.556622 TGCTCGTCTATGTGAACACTCA 59.443 45.455 6.51 0.00 0.00 3.41
384 385 3.217599 TGCTCGTCTATGTGAACACTC 57.782 47.619 6.51 0.00 0.00 3.51
385 386 3.515630 CATGCTCGTCTATGTGAACACT 58.484 45.455 6.51 0.00 0.00 3.55
386 387 2.029728 GCATGCTCGTCTATGTGAACAC 59.970 50.000 11.37 0.00 0.00 3.32
387 388 2.270923 GCATGCTCGTCTATGTGAACA 58.729 47.619 11.37 0.00 0.00 3.18
388 389 1.256376 CGCATGCTCGTCTATGTGAAC 59.744 52.381 17.13 0.00 37.05 3.18
389 390 1.135112 ACGCATGCTCGTCTATGTGAA 60.135 47.619 17.13 0.00 38.44 3.18
390 391 0.455815 ACGCATGCTCGTCTATGTGA 59.544 50.000 17.13 0.00 38.44 3.58
391 392 0.573987 CACGCATGCTCGTCTATGTG 59.426 55.000 17.13 9.77 41.21 3.21
392 393 0.173481 ACACGCATGCTCGTCTATGT 59.827 50.000 17.13 0.00 41.21 2.29
393 394 0.573987 CACACGCATGCTCGTCTATG 59.426 55.000 17.13 0.00 41.21 2.23
394 395 0.173481 ACACACGCATGCTCGTCTAT 59.827 50.000 17.13 0.00 41.21 1.98
395 396 0.806241 TACACACGCATGCTCGTCTA 59.194 50.000 17.13 1.81 41.21 2.59
396 397 0.732880 GTACACACGCATGCTCGTCT 60.733 55.000 17.13 2.81 41.21 4.18
397 398 1.702299 GTACACACGCATGCTCGTC 59.298 57.895 17.13 0.00 41.21 4.20
398 399 2.086426 CGTACACACGCATGCTCGT 61.086 57.895 17.13 9.64 42.05 4.18
399 400 2.689183 CGTACACACGCATGCTCG 59.311 61.111 17.13 8.93 42.05 5.03
408 409 4.156664 ACATAGACACTCACGTACACAC 57.843 45.455 0.00 0.00 0.00 3.82
409 410 4.612033 CGAACATAGACACTCACGTACACA 60.612 45.833 0.00 0.00 0.00 3.72
410 411 3.844657 CGAACATAGACACTCACGTACAC 59.155 47.826 0.00 0.00 0.00 2.90
411 412 3.668757 GCGAACATAGACACTCACGTACA 60.669 47.826 0.00 0.00 0.00 2.90
412 413 2.844804 GCGAACATAGACACTCACGTAC 59.155 50.000 0.00 0.00 0.00 3.67
413 414 2.485038 TGCGAACATAGACACTCACGTA 59.515 45.455 0.00 0.00 0.00 3.57
414 415 1.268625 TGCGAACATAGACACTCACGT 59.731 47.619 0.00 0.00 0.00 4.49
415 416 1.977188 TGCGAACATAGACACTCACG 58.023 50.000 0.00 0.00 0.00 4.35
416 417 2.090658 CGTTGCGAACATAGACACTCAC 59.909 50.000 0.00 0.00 0.00 3.51
417 418 2.287970 ACGTTGCGAACATAGACACTCA 60.288 45.455 0.00 0.00 0.00 3.41
418 419 2.090658 CACGTTGCGAACATAGACACTC 59.909 50.000 0.00 0.00 0.00 3.51
419 420 2.058798 CACGTTGCGAACATAGACACT 58.941 47.619 0.00 0.00 0.00 3.55
420 421 1.790623 ACACGTTGCGAACATAGACAC 59.209 47.619 0.00 0.00 0.00 3.67
421 422 2.143008 ACACGTTGCGAACATAGACA 57.857 45.000 0.00 0.00 0.00 3.41
422 423 3.515071 AAACACGTTGCGAACATAGAC 57.485 42.857 0.00 0.00 0.00 2.59
423 424 5.654317 TTTAAACACGTTGCGAACATAGA 57.346 34.783 0.00 0.00 0.00 1.98
424 425 6.130723 TCTTTTAAACACGTTGCGAACATAG 58.869 36.000 0.00 0.00 0.00 2.23
425 426 6.045698 TCTTTTAAACACGTTGCGAACATA 57.954 33.333 0.00 0.00 0.00 2.29
426 427 4.911053 TCTTTTAAACACGTTGCGAACAT 58.089 34.783 0.00 0.00 0.00 2.71
427 428 4.337985 TCTTTTAAACACGTTGCGAACA 57.662 36.364 0.00 0.00 0.00 3.18
428 429 5.508922 TCTTTCTTTTAAACACGTTGCGAAC 59.491 36.000 0.00 0.00 0.00 3.95
429 430 5.629097 TCTTTCTTTTAAACACGTTGCGAA 58.371 33.333 0.00 0.00 0.00 4.70
430 431 5.219226 TCTTTCTTTTAAACACGTTGCGA 57.781 34.783 0.00 0.00 0.00 5.10
431 432 5.454232 ACATCTTTCTTTTAAACACGTTGCG 59.546 36.000 0.00 0.00 0.00 4.85
432 433 6.291585 CCACATCTTTCTTTTAAACACGTTGC 60.292 38.462 0.00 0.00 0.00 4.17
433 434 6.291585 GCCACATCTTTCTTTTAAACACGTTG 60.292 38.462 0.00 0.00 0.00 4.10
434 435 5.746721 GCCACATCTTTCTTTTAAACACGTT 59.253 36.000 0.00 0.00 0.00 3.99
435 436 5.067283 AGCCACATCTTTCTTTTAAACACGT 59.933 36.000 0.00 0.00 0.00 4.49
436 437 5.519722 AGCCACATCTTTCTTTTAAACACG 58.480 37.500 0.00 0.00 0.00 4.49
437 438 6.582672 GCTAGCCACATCTTTCTTTTAAACAC 59.417 38.462 2.29 0.00 0.00 3.32
438 439 6.490040 AGCTAGCCACATCTTTCTTTTAAACA 59.510 34.615 12.13 0.00 0.00 2.83
439 440 6.914259 AGCTAGCCACATCTTTCTTTTAAAC 58.086 36.000 12.13 0.00 0.00 2.01
440 441 7.524717 AAGCTAGCCACATCTTTCTTTTAAA 57.475 32.000 12.13 0.00 0.00 1.52
441 442 7.524717 AAAGCTAGCCACATCTTTCTTTTAA 57.475 32.000 12.13 0.00 0.00 1.52
442 443 7.014230 ACAAAAGCTAGCCACATCTTTCTTTTA 59.986 33.333 12.13 0.00 33.05 1.52
443 444 6.183360 ACAAAAGCTAGCCACATCTTTCTTTT 60.183 34.615 12.13 4.70 34.16 2.27
444 445 5.302823 ACAAAAGCTAGCCACATCTTTCTTT 59.697 36.000 12.13 0.00 0.00 2.52
445 446 4.829492 ACAAAAGCTAGCCACATCTTTCTT 59.171 37.500 12.13 0.00 0.00 2.52
446 447 4.401925 ACAAAAGCTAGCCACATCTTTCT 58.598 39.130 12.13 0.00 0.00 2.52
447 448 4.457257 AGACAAAAGCTAGCCACATCTTTC 59.543 41.667 12.13 0.00 0.00 2.62
448 449 4.401925 AGACAAAAGCTAGCCACATCTTT 58.598 39.130 12.13 0.91 0.00 2.52
449 450 4.026356 AGACAAAAGCTAGCCACATCTT 57.974 40.909 12.13 0.00 0.00 2.40
450 451 3.710209 AGACAAAAGCTAGCCACATCT 57.290 42.857 12.13 5.71 0.00 2.90
451 452 4.759782 TCTAGACAAAAGCTAGCCACATC 58.240 43.478 12.13 3.28 36.22 3.06
452 453 4.826274 TCTAGACAAAAGCTAGCCACAT 57.174 40.909 12.13 0.00 36.22 3.21
453 454 4.222810 TCATCTAGACAAAAGCTAGCCACA 59.777 41.667 12.13 0.00 36.22 4.17
454 455 4.759782 TCATCTAGACAAAAGCTAGCCAC 58.240 43.478 12.13 0.00 36.22 5.01
455 456 4.711846 TCTCATCTAGACAAAAGCTAGCCA 59.288 41.667 12.13 0.00 36.22 4.75
456 457 5.269505 TCTCATCTAGACAAAAGCTAGCC 57.730 43.478 12.13 0.00 36.22 3.93
457 458 7.784633 ATTTCTCATCTAGACAAAAGCTAGC 57.215 36.000 6.62 6.62 36.22 3.42
459 460 9.601217 GGTTATTTCTCATCTAGACAAAAGCTA 57.399 33.333 0.00 0.00 32.51 3.32
460 461 8.103305 TGGTTATTTCTCATCTAGACAAAAGCT 58.897 33.333 0.00 0.00 32.51 3.74
461 462 8.268850 TGGTTATTTCTCATCTAGACAAAAGC 57.731 34.615 0.00 0.00 32.51 3.51
463 464 9.739276 ACATGGTTATTTCTCATCTAGACAAAA 57.261 29.630 0.00 0.00 32.51 2.44
464 465 9.383519 GACATGGTTATTTCTCATCTAGACAAA 57.616 33.333 0.00 0.00 32.51 2.83
465 466 8.762645 AGACATGGTTATTTCTCATCTAGACAA 58.237 33.333 0.00 0.00 32.51 3.18
466 467 8.311395 AGACATGGTTATTTCTCATCTAGACA 57.689 34.615 0.00 0.00 32.51 3.41
467 468 8.417106 TGAGACATGGTTATTTCTCATCTAGAC 58.583 37.037 7.22 0.00 42.33 2.59
468 469 8.539117 TGAGACATGGTTATTTCTCATCTAGA 57.461 34.615 7.22 0.00 42.33 2.43
475 476 9.255304 GAGTTAGATGAGACATGGTTATTTCTC 57.745 37.037 0.00 0.00 39.50 2.87
476 477 7.923344 CGAGTTAGATGAGACATGGTTATTTCT 59.077 37.037 0.00 0.00 0.00 2.52
477 478 7.707035 ACGAGTTAGATGAGACATGGTTATTTC 59.293 37.037 0.00 0.00 0.00 2.17
478 479 7.556844 ACGAGTTAGATGAGACATGGTTATTT 58.443 34.615 0.00 0.00 0.00 1.40
479 480 7.113658 ACGAGTTAGATGAGACATGGTTATT 57.886 36.000 0.00 0.00 0.00 1.40
480 481 6.716934 ACGAGTTAGATGAGACATGGTTAT 57.283 37.500 0.00 0.00 0.00 1.89
481 482 6.238293 CGTACGAGTTAGATGAGACATGGTTA 60.238 42.308 10.44 0.00 0.00 2.85
482 483 5.448768 CGTACGAGTTAGATGAGACATGGTT 60.449 44.000 10.44 0.00 0.00 3.67
483 484 4.035324 CGTACGAGTTAGATGAGACATGGT 59.965 45.833 10.44 0.00 0.00 3.55
484 485 4.528504 CGTACGAGTTAGATGAGACATGG 58.471 47.826 10.44 0.00 0.00 3.66
485 486 3.969352 GCGTACGAGTTAGATGAGACATG 59.031 47.826 21.65 0.00 0.00 3.21
486 487 3.003482 GGCGTACGAGTTAGATGAGACAT 59.997 47.826 21.65 0.00 0.00 3.06
487 488 2.353889 GGCGTACGAGTTAGATGAGACA 59.646 50.000 21.65 0.00 0.00 3.41
488 489 2.984458 GGCGTACGAGTTAGATGAGAC 58.016 52.381 21.65 0.00 0.00 3.36
502 503 1.527591 GCGTAAAATCCAACGGCGTAC 60.528 52.381 15.20 3.79 39.46 3.67
503 504 0.720590 GCGTAAAATCCAACGGCGTA 59.279 50.000 15.20 0.00 39.46 4.42
504 505 1.229315 TGCGTAAAATCCAACGGCGT 61.229 50.000 6.77 6.77 39.46 5.68
505 506 0.520412 CTGCGTAAAATCCAACGGCG 60.520 55.000 4.80 4.80 39.46 6.46
506 507 0.800012 TCTGCGTAAAATCCAACGGC 59.200 50.000 0.00 0.00 39.46 5.68
507 508 2.343101 TCTCTGCGTAAAATCCAACGG 58.657 47.619 0.00 0.00 39.46 4.44
508 509 4.600012 AATCTCTGCGTAAAATCCAACG 57.400 40.909 0.00 0.00 41.92 4.10
509 510 5.569059 CACAAATCTCTGCGTAAAATCCAAC 59.431 40.000 0.00 0.00 0.00 3.77
510 511 5.471797 TCACAAATCTCTGCGTAAAATCCAA 59.528 36.000 0.00 0.00 0.00 3.53
511 512 5.000591 TCACAAATCTCTGCGTAAAATCCA 58.999 37.500 0.00 0.00 0.00 3.41
512 513 5.447818 CCTCACAAATCTCTGCGTAAAATCC 60.448 44.000 0.00 0.00 0.00 3.01
513 514 5.351465 TCCTCACAAATCTCTGCGTAAAATC 59.649 40.000 0.00 0.00 0.00 2.17
514 515 5.245531 TCCTCACAAATCTCTGCGTAAAAT 58.754 37.500 0.00 0.00 0.00 1.82
515 516 4.637276 TCCTCACAAATCTCTGCGTAAAA 58.363 39.130 0.00 0.00 0.00 1.52
516 517 4.265904 TCCTCACAAATCTCTGCGTAAA 57.734 40.909 0.00 0.00 0.00 2.01
517 518 3.953712 TCCTCACAAATCTCTGCGTAA 57.046 42.857 0.00 0.00 0.00 3.18
518 519 4.471904 AATCCTCACAAATCTCTGCGTA 57.528 40.909 0.00 0.00 0.00 4.42
519 520 3.340814 AATCCTCACAAATCTCTGCGT 57.659 42.857 0.00 0.00 0.00 5.24
520 521 4.691860 AAAATCCTCACAAATCTCTGCG 57.308 40.909 0.00 0.00 0.00 5.18
544 545 9.877222 TCCTATACTATTTGACTAATCAGACCA 57.123 33.333 0.00 0.00 35.83 4.02
582 583 9.086758 AGCTAACTCATATACTATTTTACCCGT 57.913 33.333 0.00 0.00 0.00 5.28
583 584 9.355215 CAGCTAACTCATATACTATTTTACCCG 57.645 37.037 0.00 0.00 0.00 5.28
592 593 9.409918 ACAAAGTCTCAGCTAACTCATATACTA 57.590 33.333 0.00 0.00 0.00 1.82
593 594 8.299990 ACAAAGTCTCAGCTAACTCATATACT 57.700 34.615 0.00 0.00 0.00 2.12
594 595 8.934507 AACAAAGTCTCAGCTAACTCATATAC 57.065 34.615 0.00 0.00 0.00 1.47
596 597 8.754080 ACTAACAAAGTCTCAGCTAACTCATAT 58.246 33.333 0.00 0.00 30.33 1.78
597 598 8.123639 ACTAACAAAGTCTCAGCTAACTCATA 57.876 34.615 0.00 0.00 30.33 2.15
598 599 6.998802 ACTAACAAAGTCTCAGCTAACTCAT 58.001 36.000 0.00 0.00 30.33 2.90
599 600 6.406692 ACTAACAAAGTCTCAGCTAACTCA 57.593 37.500 0.00 0.00 30.33 3.41
600 601 7.149307 AGAACTAACAAAGTCTCAGCTAACTC 58.851 38.462 0.00 0.00 37.50 3.01
601 602 7.056844 AGAACTAACAAAGTCTCAGCTAACT 57.943 36.000 0.00 0.00 37.50 2.24
602 603 6.924060 TGAGAACTAACAAAGTCTCAGCTAAC 59.076 38.462 0.00 0.00 37.50 2.34
603 604 7.050970 TGAGAACTAACAAAGTCTCAGCTAA 57.949 36.000 0.00 0.00 37.50 3.09
604 605 6.650427 TGAGAACTAACAAAGTCTCAGCTA 57.350 37.500 0.00 0.00 37.50 3.32
605 606 5.537300 TGAGAACTAACAAAGTCTCAGCT 57.463 39.130 0.00 0.00 37.50 4.24
606 607 6.604735 TTTGAGAACTAACAAAGTCTCAGC 57.395 37.500 2.79 0.00 40.39 4.26
607 608 7.359598 CGGATTTGAGAACTAACAAAGTCTCAG 60.360 40.741 2.79 0.00 40.39 3.35
608 609 6.423905 CGGATTTGAGAACTAACAAAGTCTCA 59.576 38.462 0.00 0.00 39.00 3.27
609 610 6.424207 ACGGATTTGAGAACTAACAAAGTCTC 59.576 38.462 0.00 0.00 37.50 3.36
610 611 6.289064 ACGGATTTGAGAACTAACAAAGTCT 58.711 36.000 0.00 0.00 37.50 3.24
611 612 6.541111 ACGGATTTGAGAACTAACAAAGTC 57.459 37.500 0.00 0.00 37.50 3.01
612 613 7.929785 TCTTACGGATTTGAGAACTAACAAAGT 59.070 33.333 0.00 0.00 41.49 2.66
613 614 8.306680 TCTTACGGATTTGAGAACTAACAAAG 57.693 34.615 0.00 0.00 38.94 2.77
614 615 8.842358 ATCTTACGGATTTGAGAACTAACAAA 57.158 30.769 0.00 0.00 39.67 2.83
615 616 8.842358 AATCTTACGGATTTGAGAACTAACAA 57.158 30.769 0.00 0.00 41.42 2.83
628 629 1.931172 CCGCGTCAAATCTTACGGATT 59.069 47.619 4.92 0.00 45.61 3.01
629 630 1.567504 CCGCGTCAAATCTTACGGAT 58.432 50.000 4.92 0.00 43.19 4.18
630 631 1.079875 GCCGCGTCAAATCTTACGGA 61.080 55.000 4.92 0.00 43.19 4.69
631 632 1.347221 GCCGCGTCAAATCTTACGG 59.653 57.895 4.92 0.00 43.37 4.02
632 633 0.025001 CTGCCGCGTCAAATCTTACG 59.975 55.000 4.92 0.00 41.92 3.18
633 634 1.355971 TCTGCCGCGTCAAATCTTAC 58.644 50.000 4.92 0.00 0.00 2.34
634 635 2.087501 TTCTGCCGCGTCAAATCTTA 57.912 45.000 4.92 0.00 0.00 2.10
635 636 1.234821 TTTCTGCCGCGTCAAATCTT 58.765 45.000 4.92 0.00 0.00 2.40
636 637 1.069227 GTTTTCTGCCGCGTCAAATCT 60.069 47.619 4.92 0.00 0.00 2.40
637 638 1.327507 GTTTTCTGCCGCGTCAAATC 58.672 50.000 4.92 0.00 0.00 2.17
638 639 0.665835 TGTTTTCTGCCGCGTCAAAT 59.334 45.000 4.92 0.00 0.00 2.32
639 640 0.665835 ATGTTTTCTGCCGCGTCAAA 59.334 45.000 4.92 0.00 0.00 2.69
640 641 1.514003 TATGTTTTCTGCCGCGTCAA 58.486 45.000 4.92 0.00 0.00 3.18
641 642 1.732941 ATATGTTTTCTGCCGCGTCA 58.267 45.000 4.92 0.00 0.00 4.35
642 643 4.432503 CGTATATATGTTTTCTGCCGCGTC 60.433 45.833 4.92 0.00 0.00 5.19
643 644 3.427528 CGTATATATGTTTTCTGCCGCGT 59.572 43.478 4.92 0.00 0.00 6.01
644 645 3.427528 ACGTATATATGTTTTCTGCCGCG 59.572 43.478 0.00 0.00 0.00 6.46
645 646 4.985044 ACGTATATATGTTTTCTGCCGC 57.015 40.909 1.51 0.00 0.00 6.53
646 647 5.464057 TCCAACGTATATATGTTTTCTGCCG 59.536 40.000 16.16 5.20 33.41 5.69
647 648 6.854496 TCCAACGTATATATGTTTTCTGCC 57.146 37.500 16.16 0.00 33.41 4.85
648 649 7.130269 GGTTCCAACGTATATATGTTTTCTGC 58.870 38.462 16.16 7.34 33.41 4.26
649 650 8.203937 TGGTTCCAACGTATATATGTTTTCTG 57.796 34.615 16.16 7.39 33.41 3.02
650 651 8.795842 TTGGTTCCAACGTATATATGTTTTCT 57.204 30.769 16.16 0.00 33.41 2.52
651 652 9.498307 CTTTGGTTCCAACGTATATATGTTTTC 57.502 33.333 16.16 8.10 33.41 2.29
652 653 7.971722 GCTTTGGTTCCAACGTATATATGTTTT 59.028 33.333 16.16 0.00 33.41 2.43
653 654 7.477494 GCTTTGGTTCCAACGTATATATGTTT 58.523 34.615 16.16 1.75 33.41 2.83
654 655 6.238266 CGCTTTGGTTCCAACGTATATATGTT 60.238 38.462 13.54 13.54 35.92 2.71
655 656 5.235616 CGCTTTGGTTCCAACGTATATATGT 59.764 40.000 3.56 1.51 0.00 2.29
656 657 5.333798 CCGCTTTGGTTCCAACGTATATATG 60.334 44.000 3.56 0.12 0.00 1.78
657 658 4.753107 CCGCTTTGGTTCCAACGTATATAT 59.247 41.667 3.56 0.00 0.00 0.86
658 659 4.121317 CCGCTTTGGTTCCAACGTATATA 58.879 43.478 3.56 0.00 0.00 0.86
659 660 2.940410 CCGCTTTGGTTCCAACGTATAT 59.060 45.455 3.56 0.00 0.00 0.86
660 661 2.348660 CCGCTTTGGTTCCAACGTATA 58.651 47.619 3.56 0.00 0.00 1.47
661 662 1.161843 CCGCTTTGGTTCCAACGTAT 58.838 50.000 3.56 0.00 0.00 3.06
662 663 1.508808 GCCGCTTTGGTTCCAACGTA 61.509 55.000 3.56 0.00 41.21 3.57
663 664 2.841160 GCCGCTTTGGTTCCAACGT 61.841 57.895 3.56 0.00 41.21 3.99
664 665 2.050442 GCCGCTTTGGTTCCAACG 60.050 61.111 3.56 3.85 41.21 4.10
665 666 1.285950 GAGCCGCTTTGGTTCCAAC 59.714 57.895 3.56 0.00 41.86 3.77
666 667 3.758172 GAGCCGCTTTGGTTCCAA 58.242 55.556 0.00 0.00 41.86 3.53
669 670 2.954611 GTGGAGCCGCTTTGGTTC 59.045 61.111 0.00 0.00 46.63 3.62
715 716 1.651987 TTCTGTGGATCCGATTTCGC 58.348 50.000 7.39 0.00 38.18 4.70
730 731 0.447801 CTCGCCCGGAAATGTTTCTG 59.552 55.000 0.73 7.23 41.99 3.02
732 733 0.446616 GACTCGCCCGGAAATGTTTC 59.553 55.000 0.73 0.00 36.46 2.78
733 734 0.958876 GGACTCGCCCGGAAATGTTT 60.959 55.000 0.73 0.00 0.00 2.83
734 735 1.376812 GGACTCGCCCGGAAATGTT 60.377 57.895 0.73 0.00 0.00 2.71
736 737 2.106683 GTGGACTCGCCCGGAAATG 61.107 63.158 0.73 0.00 34.97 2.32
738 739 4.367023 CGTGGACTCGCCCGGAAA 62.367 66.667 0.73 0.00 34.97 3.13
742 743 4.477975 GTCTCGTGGACTCGCCCG 62.478 72.222 4.56 0.00 41.46 6.13
743 744 2.615262 GATGTCTCGTGGACTCGCCC 62.615 65.000 11.17 0.00 44.74 6.13
744 745 1.226717 GATGTCTCGTGGACTCGCC 60.227 63.158 11.17 0.00 44.74 5.54
745 746 1.583967 CGATGTCTCGTGGACTCGC 60.584 63.158 11.17 0.00 44.74 5.03
746 747 0.247735 GTCGATGTCTCGTGGACTCG 60.248 60.000 17.03 17.03 45.25 4.18
768 771 4.415332 ACTCGGTGCCGTGCGTAG 62.415 66.667 10.60 2.85 40.74 3.51
865 886 2.828874 TCGTTTTTCGACGCCTTTTT 57.171 40.000 0.00 0.00 44.01 1.94
874 895 3.704609 GCGGCCGTCGTTTTTCGA 61.705 61.111 28.70 0.00 46.83 3.71
963 1004 4.025401 GTGCGTCGGGCTGGTTTG 62.025 66.667 0.00 0.00 44.05 2.93
986 1034 2.637640 GGGGAGAGAGTGGGAGGGA 61.638 68.421 0.00 0.00 0.00 4.20
987 1035 2.041405 GGGGAGAGAGTGGGAGGG 60.041 72.222 0.00 0.00 0.00 4.30
989 1037 1.075600 GAGGGGGAGAGAGTGGGAG 60.076 68.421 0.00 0.00 0.00 4.30
990 1038 2.637640 GGAGGGGGAGAGAGTGGGA 61.638 68.421 0.00 0.00 0.00 4.37
1000 1051 3.707189 GGGAAGGGAGGAGGGGGA 61.707 72.222 0.00 0.00 0.00 4.81
1038 1089 2.624293 GGAGGGGAGGGGAAAAGAATTG 60.624 54.545 0.00 0.00 0.00 2.32
1039 1090 1.646447 GGAGGGGAGGGGAAAAGAATT 59.354 52.381 0.00 0.00 0.00 2.17
1040 1091 1.309876 GGAGGGGAGGGGAAAAGAAT 58.690 55.000 0.00 0.00 0.00 2.40
1041 1092 0.849540 GGGAGGGGAGGGGAAAAGAA 60.850 60.000 0.00 0.00 0.00 2.52
1042 1093 1.230182 GGGAGGGGAGGGGAAAAGA 60.230 63.158 0.00 0.00 0.00 2.52
1043 1094 0.851332 AAGGGAGGGGAGGGGAAAAG 60.851 60.000 0.00 0.00 0.00 2.27
1044 1095 0.849540 GAAGGGAGGGGAGGGGAAAA 60.850 60.000 0.00 0.00 0.00 2.29
1045 1096 1.230182 GAAGGGAGGGGAGGGGAAA 60.230 63.158 0.00 0.00 0.00 3.13
1046 1097 2.191846 AGAAGGGAGGGGAGGGGAA 61.192 63.158 0.00 0.00 0.00 3.97
1047 1098 2.543637 AGAAGGGAGGGGAGGGGA 60.544 66.667 0.00 0.00 0.00 4.81
1048 1099 2.040359 GAGAAGGGAGGGGAGGGG 60.040 72.222 0.00 0.00 0.00 4.79
1049 1100 1.946063 TACGAGAAGGGAGGGGAGGG 61.946 65.000 0.00 0.00 0.00 4.30
1050 1101 0.756070 GTACGAGAAGGGAGGGGAGG 60.756 65.000 0.00 0.00 0.00 4.30
1051 1102 1.102222 CGTACGAGAAGGGAGGGGAG 61.102 65.000 10.44 0.00 0.00 4.30
1052 1103 1.077212 CGTACGAGAAGGGAGGGGA 60.077 63.158 10.44 0.00 0.00 4.81
1053 1104 2.783288 GCGTACGAGAAGGGAGGGG 61.783 68.421 21.65 0.00 0.00 4.79
1054 1105 2.806237 GCGTACGAGAAGGGAGGG 59.194 66.667 21.65 0.00 0.00 4.30
1055 1106 2.408022 CGCGTACGAGAAGGGAGG 59.592 66.667 21.65 0.00 43.93 4.30
1056 1107 2.408022 CCGCGTACGAGAAGGGAG 59.592 66.667 21.65 0.00 43.93 4.30
1536 1587 1.332144 TGCGGGTGGATGGGTAGTAC 61.332 60.000 0.00 0.00 0.00 2.73
1537 1588 0.399376 ATGCGGGTGGATGGGTAGTA 60.399 55.000 0.00 0.00 0.00 1.82
1538 1589 1.279025 AATGCGGGTGGATGGGTAGT 61.279 55.000 0.00 0.00 0.00 2.73
1539 1590 0.535102 GAATGCGGGTGGATGGGTAG 60.535 60.000 0.00 0.00 0.00 3.18
1540 1591 1.529796 GAATGCGGGTGGATGGGTA 59.470 57.895 0.00 0.00 0.00 3.69
1541 1592 2.275418 GAATGCGGGTGGATGGGT 59.725 61.111 0.00 0.00 0.00 4.51
1542 1593 2.901840 CGAATGCGGGTGGATGGG 60.902 66.667 0.00 0.00 0.00 4.00
1543 1594 3.585990 GCGAATGCGGGTGGATGG 61.586 66.667 0.00 0.00 38.16 3.51
1566 1617 2.642807 TGTAACAGAAGGGGGAGGAAAG 59.357 50.000 0.00 0.00 0.00 2.62
1567 1618 2.708759 TGTAACAGAAGGGGGAGGAAA 58.291 47.619 0.00 0.00 0.00 3.13
1649 1711 3.236896 GCAATCCATCCCATCCATTTCT 58.763 45.455 0.00 0.00 0.00 2.52
1687 1755 8.986847 CACAGATAATTAGATCAAACCTAGCTG 58.013 37.037 0.00 0.99 0.00 4.24
1706 1774 0.108662 CCTCTGCACGCACACAGATA 60.109 55.000 0.55 0.00 41.84 1.98
1882 1956 3.876589 TTGGCGACGAAGAGGGTGC 62.877 63.158 0.00 0.00 0.00 5.01
1883 1957 2.027625 GTTGGCGACGAAGAGGGTG 61.028 63.158 0.00 0.00 0.00 4.61
2229 2305 5.333492 CCGTGTTATACTTTGCGTCTTTCAA 60.333 40.000 0.00 0.00 0.00 2.69
2309 2385 2.736682 GACGATGGTTGGTTCGGCG 61.737 63.158 0.00 0.00 39.61 6.46
2432 2508 2.202878 TGGGATCTTACAGCGCGC 60.203 61.111 26.66 26.66 0.00 6.86
2491 2567 7.307455 GGTCGATTTAAGATCATCTTAGGCAAC 60.307 40.741 7.20 4.47 39.80 4.17
2499 2575 6.536582 CACAGTTGGTCGATTTAAGATCATCT 59.463 38.462 0.00 0.00 31.15 2.90
2608 2685 8.871629 TTGCTTAGGTAAATGGAAGTATGAAA 57.128 30.769 0.00 0.00 0.00 2.69
2609 2686 8.871629 TTTGCTTAGGTAAATGGAAGTATGAA 57.128 30.769 0.00 0.00 0.00 2.57
2672 2749 7.059945 GTCGACAAAACATGAGAACATCATTTC 59.940 37.037 11.55 0.00 46.97 2.17
2775 2857 3.310774 CAGAAAATACTCCACATCCAGCG 59.689 47.826 0.00 0.00 0.00 5.18
2833 2915 3.449018 TGGAAGTTTTGCCAGCTTGTAAA 59.551 39.130 0.00 0.00 0.00 2.01
2985 3069 2.481471 GCCGGCAATACAGAAGGGC 61.481 63.158 24.80 0.00 0.00 5.19
3144 3228 2.643551 ACAGCAAGTTATGAATCCCCG 58.356 47.619 0.00 0.00 0.00 5.73
3215 3301 6.828273 TCAATATCCAGGGTATCAAACACAAG 59.172 38.462 0.00 0.00 31.97 3.16
3309 3395 7.933215 TCCCCAAAAATTACTTAGTAGCTTC 57.067 36.000 0.00 0.00 0.00 3.86
3403 3492 2.797156 CTGAGTGAACCAACTTCGACTG 59.203 50.000 0.00 0.00 0.00 3.51
3428 3517 4.591321 ATCAAAATCACCCTTCCAGCTA 57.409 40.909 0.00 0.00 0.00 3.32
3434 3523 4.675408 GCGGAGAAATCAAAATCACCCTTC 60.675 45.833 0.00 0.00 0.00 3.46
3455 3544 7.064253 AGCAGTTTTAACTATTTACCTACAGCG 59.936 37.037 0.00 0.00 37.08 5.18
3577 3669 0.452184 CTGAGTACCGCATCTCACGT 59.548 55.000 0.00 0.00 36.04 4.49
3637 3729 3.317150 GACAATGACAGTGATGTCGTCA 58.683 45.455 10.34 0.00 43.35 4.35
3655 3747 5.985530 CAGCTCGTGATTTATGAATAGGACA 59.014 40.000 0.00 0.00 0.00 4.02
3864 3956 6.146347 CCAAGAGAAAAGTAAGACGAGGAAAG 59.854 42.308 0.00 0.00 0.00 2.62
4044 4137 4.141620 GGCTCCCTCATCAACATCTTTCTA 60.142 45.833 0.00 0.00 0.00 2.10
4045 4138 3.371380 GGCTCCCTCATCAACATCTTTCT 60.371 47.826 0.00 0.00 0.00 2.52
4046 4139 2.948315 GGCTCCCTCATCAACATCTTTC 59.052 50.000 0.00 0.00 0.00 2.62
4175 4273 8.575589 ACTGCAACAAACATATGAGATAACAAA 58.424 29.630 10.38 0.00 0.00 2.83
4188 4286 4.887071 TCTCCAGTTAACTGCAACAAACAT 59.113 37.500 27.05 0.00 42.47 2.71
4191 4289 5.221224 CCAATCTCCAGTTAACTGCAACAAA 60.221 40.000 27.05 10.87 42.47 2.83
4234 4332 9.757227 ATCAGTTACAGACATAATTAAGAGCTC 57.243 33.333 5.27 5.27 0.00 4.09
4254 4353 5.653769 CACCCAAAGGATGAACATATCAGTT 59.346 40.000 0.00 0.00 37.88 3.16
4272 4371 0.533308 GCGTTACCTGACACACCCAA 60.533 55.000 0.00 0.00 0.00 4.12
4277 4376 1.271379 CTAGTGGCGTTACCTGACACA 59.729 52.381 1.39 0.00 40.22 3.72
4298 4397 2.227194 GTTCCCCTCTTTTTCAAGCGA 58.773 47.619 0.00 0.00 0.00 4.93
4323 4422 1.202110 GCACATCATCAAGTTCGCTGG 60.202 52.381 0.00 0.00 0.00 4.85
4329 4428 1.180029 GGCAGGCACATCATCAAGTT 58.820 50.000 0.00 0.00 0.00 2.66
4342 4452 0.321298 TTCTAACTGGTTCGGCAGGC 60.321 55.000 0.00 0.00 0.00 4.85
4385 4495 2.305927 TCTGCCGGAAATTTTCTCTCCT 59.694 45.455 5.05 0.00 0.00 3.69
4484 4894 2.809696 CGACCCAACATACTCCGTTTTT 59.190 45.455 0.00 0.00 0.00 1.94
4485 4895 2.419667 CGACCCAACATACTCCGTTTT 58.580 47.619 0.00 0.00 0.00 2.43
4486 4896 1.338389 CCGACCCAACATACTCCGTTT 60.338 52.381 0.00 0.00 0.00 3.60
4504 4914 2.671396 GCACATTACTAGGACAACACCG 59.329 50.000 0.00 0.00 34.73 4.94
4548 4958 9.520515 TTGTTAAGAGCTTCTCCTAAATGAATT 57.479 29.630 0.00 0.00 0.00 2.17
4594 5004 6.611380 AAATGACGCGATATTTGTTTCAAC 57.389 33.333 15.93 0.00 0.00 3.18
4595 5005 7.081349 AGAAAATGACGCGATATTTGTTTCAA 58.919 30.769 15.93 0.00 0.00 2.69
4601 5011 9.864034 AGTAATAAGAAAATGACGCGATATTTG 57.136 29.630 15.93 0.00 0.00 2.32
4602 5012 9.864034 CAGTAATAAGAAAATGACGCGATATTT 57.136 29.630 15.93 15.81 0.00 1.40
4603 5013 9.256477 TCAGTAATAAGAAAATGACGCGATATT 57.744 29.630 15.93 10.09 0.00 1.28
4604 5014 8.812147 TCAGTAATAAGAAAATGACGCGATAT 57.188 30.769 15.93 3.08 0.00 1.63
4606 5016 7.534085 TTCAGTAATAAGAAAATGACGCGAT 57.466 32.000 15.93 0.00 0.00 4.58
4608 5018 8.429739 TTTTTCAGTAATAAGAAAATGACGCG 57.570 30.769 3.53 3.53 41.67 6.01
4609 5019 9.394477 ACTTTTTCAGTAATAAGAAAATGACGC 57.606 29.630 15.70 0.00 41.67 5.19
4622 5032 9.665719 AACAATTTCCACAACTTTTTCAGTAAT 57.334 25.926 0.00 0.00 32.94 1.89
4680 5109 2.570284 GGGGTTTTCCGCCTTGTGG 61.570 63.158 0.00 0.00 45.68 4.17
4751 5181 0.988145 CTCCATGGAACCCTAGGCCA 60.988 60.000 17.00 8.85 35.91 5.36
5047 5481 4.098196 GGAGACACCACCTAATCAGTAGAC 59.902 50.000 0.00 0.00 38.79 2.59
5061 5495 0.669318 GCGATTCAACGGAGACACCA 60.669 55.000 0.00 0.00 38.90 4.17
5089 5523 2.493278 GCTGGGTAAATGTGCAGTGAAT 59.507 45.455 0.00 0.00 0.00 2.57
5097 5531 2.795329 ACTGAAGGCTGGGTAAATGTG 58.205 47.619 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.