Multiple sequence alignment - TraesCS5D01G509100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G509100 chr5D 100.000 4909 0 0 1 4909 534009062 534004154 0.000000e+00 9066.0
1 TraesCS5D01G509100 chr5D 78.166 687 124 20 2599 3271 65904794 65904120 9.830000e-112 414.0
2 TraesCS5D01G509100 chr5D 86.061 165 23 0 3745 3909 65904029 65903865 1.400000e-40 178.0
3 TraesCS5D01G509100 chr5D 100.000 40 0 0 3896 3935 534005128 534005089 1.900000e-09 75.0
4 TraesCS5D01G509100 chr5D 100.000 40 0 0 3935 3974 534005167 534005128 1.900000e-09 75.0
5 TraesCS5D01G509100 chr4A 94.447 1963 101 6 1648 3606 637921726 637923684 0.000000e+00 3014.0
6 TraesCS5D01G509100 chr4A 85.593 826 51 29 766 1571 637920764 637921541 0.000000e+00 804.0
7 TraesCS5D01G509100 chr4A 98.387 248 4 0 4662 4909 637929618 637929865 2.100000e-118 436.0
8 TraesCS5D01G509100 chr4A 88.251 366 30 8 3935 4290 637923954 637924316 4.540000e-115 425.0
9 TraesCS5D01G509100 chr4A 87.554 233 22 5 3709 3935 637923763 637923994 3.770000e-66 263.0
10 TraesCS5D01G509100 chr4A 100.000 31 0 0 760 790 603947649 603947619 1.910000e-04 58.4
11 TraesCS5D01G509100 chr5B 92.857 1904 123 13 1743 3642 674270450 674268556 0.000000e+00 2750.0
12 TraesCS5D01G509100 chr5B 85.647 1268 98 26 372 1599 674271789 674270566 0.000000e+00 1256.0
13 TraesCS5D01G509100 chr5B 80.794 1083 94 47 3935 4909 674268343 674267267 0.000000e+00 743.0
14 TraesCS5D01G509100 chr5B 73.819 1482 274 84 1839 3271 65187920 65189336 2.660000e-132 483.0
15 TraesCS5D01G509100 chr5B 91.304 230 16 4 3709 3935 674268530 674268302 1.330000e-80 311.0
16 TraesCS5D01G509100 chr5B 86.310 168 23 0 3742 3909 65189549 65189716 3.020000e-42 183.0
17 TraesCS5D01G509100 chr5B 90.400 125 12 0 1158 1282 65185834 65185958 1.090000e-36 165.0
18 TraesCS5D01G509100 chr7D 93.699 365 11 6 1 354 616100630 616100267 2.010000e-148 536.0
19 TraesCS5D01G509100 chr7D 100.000 42 0 0 1624 1665 592075581 592075622 1.470000e-10 78.7
20 TraesCS5D01G509100 chr7D 100.000 30 0 0 760 789 234553725 234553696 6.860000e-04 56.5
21 TraesCS5D01G509100 chr3B 97.581 248 5 1 96 342 706012696 706012943 1.630000e-114 424.0
22 TraesCS5D01G509100 chr3B 95.000 40 2 0 753 792 744731032 744730993 4.100000e-06 63.9
23 TraesCS5D01G509100 chr7B 96.371 248 7 2 96 342 244598502 244598256 1.650000e-109 407.0
24 TraesCS5D01G509100 chr7B 100.000 41 0 0 1625 1665 670286332 670286292 5.270000e-10 76.8
25 TraesCS5D01G509100 chr7B 92.857 42 3 0 748 789 206509285 206509244 1.480000e-05 62.1
26 TraesCS5D01G509100 chr5A 77.522 694 128 19 2590 3271 55162694 55162017 4.610000e-105 392.0
27 TraesCS5D01G509100 chr5A 86.667 165 22 0 3745 3909 55161926 55161762 3.020000e-42 183.0
28 TraesCS5D01G509100 chr5A 88.321 137 16 0 1161 1297 55165567 55165431 1.090000e-36 165.0
29 TraesCS5D01G509100 chr5A 97.674 43 1 0 1625 1667 605241818 605241776 1.900000e-09 75.0
30 TraesCS5D01G509100 chr6A 82.677 254 31 10 96 340 41670034 41670283 3.850000e-51 213.0
31 TraesCS5D01G509100 chrUn 82.661 248 31 10 96 334 30700722 30700966 4.980000e-50 209.0
32 TraesCS5D01G509100 chrUn 95.652 46 1 1 1625 1669 12636191 12636236 6.820000e-09 73.1
33 TraesCS5D01G509100 chr2A 82.449 245 31 10 103 339 40835649 40835409 2.320000e-48 204.0
34 TraesCS5D01G509100 chr6D 82.609 230 32 6 111 335 332958750 332958976 3.880000e-46 196.0
35 TraesCS5D01G509100 chr6D 100.000 29 0 0 760 788 457634709 457634737 2.000000e-03 54.7
36 TraesCS5D01G509100 chr2B 84.466 206 22 10 141 343 401816780 401816582 1.390000e-45 195.0
37 TraesCS5D01G509100 chr2B 81.212 165 31 0 3745 3909 116849252 116849088 3.080000e-27 134.0
38 TraesCS5D01G509100 chr2B 85.714 63 9 0 1603 1665 68226791 68226853 3.170000e-07 67.6
39 TraesCS5D01G509100 chr2B 100.000 34 0 0 757 790 468705017 468704984 4.100000e-06 63.9
40 TraesCS5D01G509100 chr1D 80.488 246 36 10 97 338 59456890 59457127 1.400000e-40 178.0
41 TraesCS5D01G509100 chr1D 100.000 29 0 0 760 788 97910395 97910367 2.000000e-03 54.7
42 TraesCS5D01G509100 chr7A 100.000 42 0 0 1624 1665 501064791 501064832 1.470000e-10 78.7
43 TraesCS5D01G509100 chr6B 100.000 42 0 0 1625 1666 437482965 437482924 1.470000e-10 78.7
44 TraesCS5D01G509100 chr3A 100.000 41 0 0 1625 1665 80090182 80090142 5.270000e-10 76.8
45 TraesCS5D01G509100 chr4D 97.619 42 1 0 1625 1666 40845311 40845352 6.820000e-09 73.1
46 TraesCS5D01G509100 chr3D 100.000 29 0 0 760 788 553932100 553932128 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G509100 chr5D 534004154 534009062 4908 True 3072.000000 9066 100.000000 1 4909 3 chr5D.!!$R2 4908
1 TraesCS5D01G509100 chr5D 65903865 65904794 929 True 296.000000 414 82.113500 2599 3909 2 chr5D.!!$R1 1310
2 TraesCS5D01G509100 chr4A 637920764 637924316 3552 False 1126.500000 3014 88.961250 766 4290 4 chr4A.!!$F2 3524
3 TraesCS5D01G509100 chr5B 674267267 674271789 4522 True 1265.000000 2750 87.650500 372 4909 4 chr5B.!!$R1 4537
4 TraesCS5D01G509100 chr5B 65185834 65189716 3882 False 277.000000 483 83.509667 1158 3909 3 chr5B.!!$F1 2751
5 TraesCS5D01G509100 chr5A 55161762 55165567 3805 True 246.666667 392 84.170000 1161 3909 3 chr5A.!!$R2 2748

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
989 1017 0.042581 CCCTAAACCTTTGCCCCCAT 59.957 55.0 0.0 0.0 0.0 4.00 F
1543 1860 0.034863 GGGGGCGATTTTGTGAGGTA 60.035 55.0 0.0 0.0 0.0 3.08 F
3143 5277 0.966179 GCAAGGGTGGTGTAAAAGGG 59.034 55.0 0.0 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2699 4822 0.753111 GACATCCCCCTCCACAATGC 60.753 60.0 0.00 0.0 0.00 3.56 R
3305 5439 0.550914 ATATTCGCTGGGGCTCCAAA 59.449 50.0 6.84 0.0 43.51 3.28 R
4530 6900 0.036732 TCCTTCATGCAAAGTCGCCT 59.963 50.0 0.00 0.0 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 4.966787 GGCGGTGTTGGGGAAGCA 62.967 66.667 0.00 0.00 0.00 3.91
58 59 3.670377 GCGGTGTTGGGGAAGCAC 61.670 66.667 0.00 0.00 0.00 4.40
59 60 3.353836 CGGTGTTGGGGAAGCACG 61.354 66.667 0.00 0.00 34.25 5.34
60 61 2.983592 GGTGTTGGGGAAGCACGG 60.984 66.667 0.00 0.00 34.25 4.94
61 62 2.983592 GTGTTGGGGAAGCACGGG 60.984 66.667 0.00 0.00 0.00 5.28
62 63 3.172106 TGTTGGGGAAGCACGGGA 61.172 61.111 0.00 0.00 0.00 5.14
63 64 2.359975 GTTGGGGAAGCACGGGAG 60.360 66.667 0.00 0.00 0.00 4.30
64 65 3.646715 TTGGGGAAGCACGGGAGG 61.647 66.667 0.00 0.00 0.00 4.30
67 68 4.097361 GGGAAGCACGGGAGGGAC 62.097 72.222 0.00 0.00 32.31 4.46
68 69 4.452733 GGAAGCACGGGAGGGACG 62.453 72.222 0.00 0.00 32.31 4.79
69 70 4.452733 GAAGCACGGGAGGGACGG 62.453 72.222 0.00 0.00 32.31 4.79
71 72 4.779733 AGCACGGGAGGGACGGAT 62.780 66.667 0.00 0.00 32.31 4.18
72 73 4.222847 GCACGGGAGGGACGGATC 62.223 72.222 0.00 0.00 32.31 3.36
73 74 3.537874 CACGGGAGGGACGGATCC 61.538 72.222 0.00 0.00 45.42 3.36
122 123 4.893601 GGTAGAAGCGGGCGCCTC 62.894 72.222 28.56 16.35 43.17 4.70
123 124 4.893601 GTAGAAGCGGGCGCCTCC 62.894 72.222 28.56 17.47 43.17 4.30
143 144 4.783621 GCGGTGGCAGCAGATGGA 62.784 66.667 17.80 0.00 39.62 3.41
144 145 2.191375 CGGTGGCAGCAGATGGAT 59.809 61.111 17.80 0.00 0.00 3.41
145 146 1.890979 CGGTGGCAGCAGATGGATC 60.891 63.158 17.80 0.00 0.00 3.36
146 147 1.530771 GGTGGCAGCAGATGGATCT 59.469 57.895 12.58 0.00 37.72 2.75
147 148 0.534652 GGTGGCAGCAGATGGATCTC 60.535 60.000 12.58 0.00 34.22 2.75
148 149 0.879400 GTGGCAGCAGATGGATCTCG 60.879 60.000 0.00 0.00 34.22 4.04
149 150 1.044790 TGGCAGCAGATGGATCTCGA 61.045 55.000 0.00 0.00 34.22 4.04
150 151 0.319727 GGCAGCAGATGGATCTCGAG 60.320 60.000 5.93 5.93 34.22 4.04
151 152 0.672889 GCAGCAGATGGATCTCGAGA 59.327 55.000 19.19 19.19 34.22 4.04
152 153 1.336148 GCAGCAGATGGATCTCGAGAG 60.336 57.143 21.52 6.25 34.22 3.20
153 154 1.270274 CAGCAGATGGATCTCGAGAGG 59.730 57.143 21.52 5.24 34.22 3.69
154 155 0.602562 GCAGATGGATCTCGAGAGGG 59.397 60.000 21.52 5.91 34.22 4.30
155 156 1.255882 CAGATGGATCTCGAGAGGGG 58.744 60.000 21.52 2.28 34.22 4.79
156 157 0.541764 AGATGGATCTCGAGAGGGGC 60.542 60.000 21.52 9.70 29.30 5.80
157 158 1.872197 GATGGATCTCGAGAGGGGCG 61.872 65.000 21.52 0.00 0.00 6.13
158 159 3.984749 GGATCTCGAGAGGGGCGC 61.985 72.222 21.52 0.00 0.00 6.53
159 160 4.335584 GATCTCGAGAGGGGCGCG 62.336 72.222 21.52 0.00 41.42 6.86
186 187 4.052229 ACGCGAGTTGGGGAGACG 62.052 66.667 15.93 0.00 46.40 4.18
187 188 4.796231 CGCGAGTTGGGGAGACGG 62.796 72.222 0.00 0.00 0.00 4.79
188 189 3.379445 GCGAGTTGGGGAGACGGA 61.379 66.667 0.00 0.00 0.00 4.69
189 190 2.722201 GCGAGTTGGGGAGACGGAT 61.722 63.158 0.00 0.00 0.00 4.18
190 191 1.437986 CGAGTTGGGGAGACGGATC 59.562 63.158 0.00 0.00 0.00 3.36
191 192 1.823976 GAGTTGGGGAGACGGATCC 59.176 63.158 0.00 0.00 38.76 3.36
192 193 2.017559 GAGTTGGGGAGACGGATCCG 62.018 65.000 32.20 32.20 40.56 4.18
355 356 0.359205 CGTTTCTTTCGCTCGTCTCG 59.641 55.000 0.00 0.00 0.00 4.04
356 357 1.406447 GTTTCTTTCGCTCGTCTCGT 58.594 50.000 0.00 0.00 0.00 4.18
357 358 1.122680 GTTTCTTTCGCTCGTCTCGTG 59.877 52.381 0.00 0.00 0.00 4.35
358 359 0.309922 TTCTTTCGCTCGTCTCGTGT 59.690 50.000 0.00 0.00 0.00 4.49
359 360 1.150827 TCTTTCGCTCGTCTCGTGTA 58.849 50.000 0.00 0.00 0.00 2.90
360 361 1.128136 TCTTTCGCTCGTCTCGTGTAG 59.872 52.381 0.00 0.00 0.00 2.74
361 362 0.870393 TTTCGCTCGTCTCGTGTAGT 59.130 50.000 0.00 0.00 0.00 2.73
362 363 0.441533 TTCGCTCGTCTCGTGTAGTC 59.558 55.000 0.00 0.00 0.00 2.59
363 364 0.668401 TCGCTCGTCTCGTGTAGTCA 60.668 55.000 0.00 0.00 0.00 3.41
364 365 0.374063 CGCTCGTCTCGTGTAGTCAT 59.626 55.000 0.00 0.00 0.00 3.06
365 366 1.816370 GCTCGTCTCGTGTAGTCATG 58.184 55.000 0.00 0.00 0.00 3.07
366 367 1.532090 GCTCGTCTCGTGTAGTCATGG 60.532 57.143 0.00 0.00 0.00 3.66
367 368 1.064208 CTCGTCTCGTGTAGTCATGGG 59.936 57.143 0.00 0.00 32.69 4.00
368 369 0.809385 CGTCTCGTGTAGTCATGGGT 59.191 55.000 0.00 0.00 33.17 4.51
369 370 1.467543 CGTCTCGTGTAGTCATGGGTG 60.468 57.143 0.00 0.00 33.17 4.61
370 371 1.135083 GTCTCGTGTAGTCATGGGTGG 60.135 57.143 0.00 0.00 33.17 4.61
371 372 0.895530 CTCGTGTAGTCATGGGTGGT 59.104 55.000 0.00 0.00 0.00 4.16
372 373 0.606096 TCGTGTAGTCATGGGTGGTG 59.394 55.000 0.00 0.00 0.00 4.17
373 374 0.320374 CGTGTAGTCATGGGTGGTGT 59.680 55.000 0.00 0.00 0.00 4.16
374 375 1.546923 CGTGTAGTCATGGGTGGTGTA 59.453 52.381 0.00 0.00 0.00 2.90
375 376 2.673043 CGTGTAGTCATGGGTGGTGTAC 60.673 54.545 0.00 0.00 0.00 2.90
376 377 2.300723 GTGTAGTCATGGGTGGTGTACA 59.699 50.000 0.00 0.00 0.00 2.90
377 378 3.055385 GTGTAGTCATGGGTGGTGTACAT 60.055 47.826 0.00 0.00 0.00 2.29
378 379 2.787473 AGTCATGGGTGGTGTACATG 57.213 50.000 0.00 0.00 42.44 3.21
391 392 3.128938 GGTGTACATGTTAGCTCTCTCGT 59.871 47.826 2.30 0.00 0.00 4.18
392 393 4.099120 GTGTACATGTTAGCTCTCTCGTG 58.901 47.826 2.30 0.00 0.00 4.35
415 416 2.727123 TGTATGGTTGTGCCCCTATG 57.273 50.000 0.00 0.00 36.04 2.23
420 421 3.080300 TGGTTGTGCCCCTATGTAAAG 57.920 47.619 0.00 0.00 36.04 1.85
421 422 2.377193 TGGTTGTGCCCCTATGTAAAGT 59.623 45.455 0.00 0.00 36.04 2.66
428 429 5.906495 TGTGCCCCTATGTAAAGTCCTAATA 59.094 40.000 0.00 0.00 0.00 0.98
429 430 6.561070 TGTGCCCCTATGTAAAGTCCTAATAT 59.439 38.462 0.00 0.00 0.00 1.28
430 431 7.735777 TGTGCCCCTATGTAAAGTCCTAATATA 59.264 37.037 0.00 0.00 0.00 0.86
432 433 9.346515 TGCCCCTATGTAAAGTCCTAATATATT 57.653 33.333 2.97 2.97 0.00 1.28
509 510 9.077885 AGTTGGAGTGCATTTTTCTTCTATAAA 57.922 29.630 0.00 0.00 0.00 1.40
525 526 8.531982 TCTTCTATAAATGGTATTCGGGAGATG 58.468 37.037 0.00 0.00 39.57 2.90
527 528 8.430573 TCTATAAATGGTATTCGGGAGATGAA 57.569 34.615 0.00 0.00 39.57 2.57
537 538 8.297426 GGTATTCGGGAGATGAATTTTAATTCC 58.703 37.037 11.54 0.00 43.19 3.01
556 557 3.930336 TCCAGATAGTTTGCAGTGACAG 58.070 45.455 0.00 0.00 0.00 3.51
562 563 3.874392 AGTTTGCAGTGACAGCTTTTT 57.126 38.095 0.82 0.00 0.00 1.94
570 571 1.678101 GTGACAGCTTTTTCTGGTGCT 59.322 47.619 0.00 0.00 38.36 4.40
606 607 2.144482 AAACTCAACTACACGGGTCG 57.856 50.000 0.00 0.00 0.00 4.79
609 610 1.228521 TCAACTACACGGGTCGGGA 60.229 57.895 0.00 0.00 32.98 5.14
637 638 3.015145 ATGGCCCGTACCCAAGCT 61.015 61.111 0.00 0.00 35.67 3.74
648 649 3.181524 CGTACCCAAGCTAAATGTGTTCG 60.182 47.826 0.00 0.00 0.00 3.95
650 651 4.010667 ACCCAAGCTAAATGTGTTCGTA 57.989 40.909 0.00 0.00 0.00 3.43
660 661 3.975168 ATGTGTTCGTAGCTAAGGGTT 57.025 42.857 6.84 0.00 0.00 4.11
680 681 6.010850 GGGTTTTTGTTCCCTCTTTATCTCT 58.989 40.000 0.00 0.00 40.48 3.10
683 684 8.512956 GGTTTTTGTTCCCTCTTTATCTCTAAC 58.487 37.037 0.00 0.00 0.00 2.34
685 686 9.635404 TTTTTGTTCCCTCTTTATCTCTAACAA 57.365 29.630 0.00 0.00 34.72 2.83
751 752 6.612247 TTAAGAACATTTTCGAAGCACTCA 57.388 33.333 0.00 0.00 36.78 3.41
752 753 4.474226 AGAACATTTTCGAAGCACTCAC 57.526 40.909 0.00 0.00 36.78 3.51
755 756 3.733337 ACATTTTCGAAGCACTCACTCT 58.267 40.909 0.00 0.00 0.00 3.24
757 758 2.890808 TTTCGAAGCACTCACTCTGT 57.109 45.000 0.00 0.00 0.00 3.41
760 761 0.389166 CGAAGCACTCACTCTGTCCC 60.389 60.000 0.00 0.00 0.00 4.46
761 762 0.681733 GAAGCACTCACTCTGTCCCA 59.318 55.000 0.00 0.00 0.00 4.37
772 773 5.063204 TCACTCTGTCCCAAAATAAGTGTG 58.937 41.667 0.00 0.00 35.37 3.82
804 805 5.788450 AGTTCAAATGAAACCACAACAACA 58.212 33.333 0.00 0.00 35.58 3.33
827 828 7.949434 ACAATTTTAGTACGGAGGGAGTATAG 58.051 38.462 0.00 0.00 0.00 1.31
841 853 8.537858 GGAGGGAGTATAGTTTAGAGTTCAAAA 58.462 37.037 0.00 0.00 0.00 2.44
948 975 4.854924 CGCACCCATCCATCCGCA 62.855 66.667 0.00 0.00 0.00 5.69
988 1016 1.467432 CCCTAAACCTTTGCCCCCA 59.533 57.895 0.00 0.00 0.00 4.96
989 1017 0.042581 CCCTAAACCTTTGCCCCCAT 59.957 55.000 0.00 0.00 0.00 4.00
991 1019 1.831106 CCTAAACCTTTGCCCCCATTC 59.169 52.381 0.00 0.00 0.00 2.67
1151 1196 4.200283 CGTCTCCTGCTCCGGCTC 62.200 72.222 0.00 0.00 39.59 4.70
1152 1197 4.200283 GTCTCCTGCTCCGGCTCG 62.200 72.222 0.00 0.00 39.59 5.03
1320 1365 3.262915 CACCTCCACTCTTCCTCATCTTT 59.737 47.826 0.00 0.00 0.00 2.52
1324 1369 3.328931 TCCACTCTTCCTCATCTTTGCTT 59.671 43.478 0.00 0.00 0.00 3.91
1327 1372 2.422832 CTCTTCCTCATCTTTGCTTGCC 59.577 50.000 0.00 0.00 0.00 4.52
1333 1378 2.824341 CTCATCTTTGCTTGCCTTTCCT 59.176 45.455 0.00 0.00 0.00 3.36
1334 1379 2.559668 TCATCTTTGCTTGCCTTTCCTG 59.440 45.455 0.00 0.00 0.00 3.86
1335 1380 0.675633 TCTTTGCTTGCCTTTCCTGC 59.324 50.000 0.00 0.00 0.00 4.85
1336 1381 0.677842 CTTTGCTTGCCTTTCCTGCT 59.322 50.000 0.00 0.00 0.00 4.24
1337 1382 1.888512 CTTTGCTTGCCTTTCCTGCTA 59.111 47.619 0.00 0.00 0.00 3.49
1338 1383 1.247567 TTGCTTGCCTTTCCTGCTAC 58.752 50.000 0.00 0.00 0.00 3.58
1339 1384 0.401738 TGCTTGCCTTTCCTGCTACT 59.598 50.000 0.00 0.00 0.00 2.57
1400 1704 2.426522 CCGGAATTCAGAGTTTGAGCA 58.573 47.619 7.93 0.00 37.07 4.26
1405 1709 5.397326 GGAATTCAGAGTTTGAGCATTGAC 58.603 41.667 7.93 0.00 37.07 3.18
1407 1711 5.624344 ATTCAGAGTTTGAGCATTGACAG 57.376 39.130 0.00 0.00 37.07 3.51
1469 1777 0.039035 GGTTGTACAGGGGAATGCCA 59.961 55.000 0.00 0.00 35.15 4.92
1534 1851 0.909610 TCAGTGAGAGGGGGCGATTT 60.910 55.000 0.00 0.00 0.00 2.17
1537 1854 0.322546 GTGAGAGGGGGCGATTTTGT 60.323 55.000 0.00 0.00 0.00 2.83
1539 1856 0.035439 GAGAGGGGGCGATTTTGTGA 60.035 55.000 0.00 0.00 0.00 3.58
1540 1857 0.035056 AGAGGGGGCGATTTTGTGAG 60.035 55.000 0.00 0.00 0.00 3.51
1541 1858 1.000896 AGGGGGCGATTTTGTGAGG 60.001 57.895 0.00 0.00 0.00 3.86
1542 1859 1.304134 GGGGGCGATTTTGTGAGGT 60.304 57.895 0.00 0.00 0.00 3.85
1543 1860 0.034863 GGGGGCGATTTTGTGAGGTA 60.035 55.000 0.00 0.00 0.00 3.08
1544 1861 1.092348 GGGGCGATTTTGTGAGGTAC 58.908 55.000 0.00 0.00 0.00 3.34
1560 1880 6.207417 TGTGAGGTACTACTACTGTTTGGTAC 59.793 42.308 0.00 7.03 41.55 3.34
1571 1900 8.958119 ACTACTGTTTGGTACATATATGTTGG 57.042 34.615 22.90 6.90 41.97 3.77
1578 1907 3.502211 GGTACATATATGTTGGCAGGTGC 59.498 47.826 22.90 0.00 41.97 5.01
1589 1918 1.301716 GCAGGTGCGGAAAGTGAGA 60.302 57.895 0.00 0.00 0.00 3.27
1603 1932 7.095355 GCGGAAAGTGAGAGTTTCTTATTGTTA 60.095 37.037 0.00 0.00 37.60 2.41
1604 1933 8.770828 CGGAAAGTGAGAGTTTCTTATTGTTAA 58.229 33.333 0.00 0.00 37.60 2.01
1609 1938 9.403583 AGTGAGAGTTTCTTATTGTTAAAACCA 57.596 29.630 0.00 0.00 33.18 3.67
1623 1952 7.972623 TGTTAAAACCATTTTTGTAGTGTCG 57.027 32.000 0.00 0.00 35.62 4.35
1625 1954 8.671921 TGTTAAAACCATTTTTGTAGTGTCGTA 58.328 29.630 0.00 0.00 35.62 3.43
1626 1955 9.161684 GTTAAAACCATTTTTGTAGTGTCGTAG 57.838 33.333 0.00 0.00 35.62 3.51
1627 1956 6.930667 AAACCATTTTTGTAGTGTCGTAGT 57.069 33.333 0.00 0.00 0.00 2.73
1628 1957 5.917541 ACCATTTTTGTAGTGTCGTAGTG 57.082 39.130 0.00 0.00 0.00 2.74
1630 1959 5.464389 ACCATTTTTGTAGTGTCGTAGTGTC 59.536 40.000 0.00 0.00 0.00 3.67
1631 1960 5.464057 CCATTTTTGTAGTGTCGTAGTGTCA 59.536 40.000 0.00 0.00 0.00 3.58
1632 1961 6.018588 CCATTTTTGTAGTGTCGTAGTGTCAA 60.019 38.462 0.00 0.00 0.00 3.18
1634 1963 6.964741 TTTTGTAGTGTCGTAGTGTCAAAA 57.035 33.333 0.00 0.00 33.31 2.44
1636 1965 7.542534 TTTGTAGTGTCGTAGTGTCAAAAAT 57.457 32.000 0.00 0.00 0.00 1.82
1637 1966 6.519353 TGTAGTGTCGTAGTGTCAAAAATG 57.481 37.500 0.00 0.00 0.00 2.32
1638 1967 5.464057 TGTAGTGTCGTAGTGTCAAAAATGG 59.536 40.000 0.00 0.00 0.00 3.16
1640 1969 4.510340 AGTGTCGTAGTGTCAAAAATGGTC 59.490 41.667 0.00 0.00 0.00 4.02
1641 1970 4.510340 GTGTCGTAGTGTCAAAAATGGTCT 59.490 41.667 0.00 0.00 0.00 3.85
1642 1971 5.007332 GTGTCGTAGTGTCAAAAATGGTCTT 59.993 40.000 0.00 0.00 0.00 3.01
1646 1975 6.932400 TCGTAGTGTCAAAAATGGTCTTACAT 59.068 34.615 0.00 0.00 0.00 2.29
1774 3879 9.230932 GTCGTGTATTTGACTAGTTATTACTCC 57.769 37.037 0.00 0.00 35.78 3.85
1820 3926 5.512473 TGTGTTGCCGTGTTAGTAAAATTC 58.488 37.500 0.00 0.00 0.00 2.17
1831 3938 7.306983 CGTGTTAGTAAAATTCGGTCTTCTGTT 60.307 37.037 0.00 0.00 0.00 3.16
1841 3948 5.682943 TCGGTCTTCTGTTATTTTGTTGG 57.317 39.130 0.00 0.00 0.00 3.77
1948 4055 2.574369 TCGGGATTGACCTGGTATGTTT 59.426 45.455 0.00 0.00 44.73 2.83
1954 4061 5.123979 GGATTGACCTGGTATGTTTTCACTC 59.876 44.000 0.00 0.00 35.41 3.51
1955 4062 4.698201 TGACCTGGTATGTTTTCACTCA 57.302 40.909 0.00 0.00 0.00 3.41
2063 4172 6.073819 TGAGTGTCAATGACATTGTAACTTCG 60.074 38.462 25.47 5.98 44.63 3.79
2159 4270 7.578310 ACTGTCAATATTGCTGCTCATTTAT 57.422 32.000 10.76 0.00 0.00 1.40
2164 4275 8.080417 GTCAATATTGCTGCTCATTTATCACAT 58.920 33.333 10.76 0.00 0.00 3.21
2294 4405 1.342175 TGGATGGATGCCAGCAATCAA 60.342 47.619 0.00 0.00 42.36 2.57
2305 4416 5.653507 TGCCAGCAATCAAATTGTATTCTC 58.346 37.500 0.00 0.00 42.20 2.87
2340 4451 7.340743 AGAGGTGAGATATTCTGGGATAATACG 59.659 40.741 0.00 0.00 0.00 3.06
2367 4478 9.307121 CAGATTTATAAACTGTCAGAGTACCTG 57.693 37.037 6.91 5.31 44.27 4.00
2380 4502 6.015282 TCAGAGTACCTGATGATCTATGCAT 58.985 40.000 3.79 3.79 46.38 3.96
2385 4507 7.780064 AGTACCTGATGATCTATGCATATCAC 58.220 38.462 13.17 8.82 35.06 3.06
2391 4513 7.545489 TGATGATCTATGCATATCACTCTGAC 58.455 38.462 13.17 4.08 35.06 3.51
2451 4573 7.323420 TCTAGATACATGGACAAAGTCAACTG 58.677 38.462 0.00 0.00 33.68 3.16
2595 4718 8.258007 ACTGCATAACTCAGTTAGCTATTGTTA 58.742 33.333 15.61 1.28 41.61 2.41
2604 4727 9.250624 CTCAGTTAGCTATTGTTAATACAGACC 57.749 37.037 0.00 0.00 35.28 3.85
2699 4822 6.113411 AGGATAAGGTCATTGACGGTAAAAG 58.887 40.000 10.56 0.00 32.65 2.27
3045 5173 4.755411 CAGGTTAGCTTATTCTGACGGAA 58.245 43.478 0.00 0.00 38.41 4.30
3064 5192 4.993584 CGGAAGTCTCATATCTCCAATTGG 59.006 45.833 19.08 19.08 0.00 3.16
3143 5277 0.966179 GCAAGGGTGGTGTAAAAGGG 59.034 55.000 0.00 0.00 0.00 3.95
3230 5364 1.231221 CGAAAATTGTCACCGGGTCA 58.769 50.000 6.32 0.00 0.00 4.02
3305 5439 6.964807 TCCATTAGCTTGTCATGCATATTT 57.035 33.333 12.76 0.00 0.00 1.40
3376 5510 5.765182 GGTTGATGATTCGGTATCCATCTTT 59.235 40.000 0.00 0.00 31.87 2.52
3420 5555 4.202284 GCCCAATGGTATTAGGACGTTAGA 60.202 45.833 0.00 0.00 0.00 2.10
3512 5772 3.947834 GCTGGCATGTGTATTAAAGGACT 59.052 43.478 0.00 0.00 0.00 3.85
3532 5792 5.574443 GGACTTGCAATGTTAAGCTTGAATC 59.426 40.000 9.86 0.00 0.00 2.52
3533 5793 6.088016 ACTTGCAATGTTAAGCTTGAATCA 57.912 33.333 9.86 3.32 0.00 2.57
3571 5831 4.760204 AGCTAGGTAAAACATCACACAACC 59.240 41.667 0.00 0.00 0.00 3.77
3572 5832 4.517453 GCTAGGTAAAACATCACACAACCA 59.483 41.667 0.00 0.00 0.00 3.67
3592 5852 5.815581 ACCAAACAAGCATAGGATTCTGTA 58.184 37.500 0.00 0.00 0.00 2.74
3593 5853 5.648092 ACCAAACAAGCATAGGATTCTGTAC 59.352 40.000 0.00 0.00 0.00 2.90
3606 5866 4.384647 GGATTCTGTACAGCCCAGAGAAAT 60.385 45.833 18.45 9.65 39.91 2.17
3608 5868 5.755409 TTCTGTACAGCCCAGAGAAATAA 57.245 39.130 18.45 0.00 39.91 1.40
3609 5869 5.957771 TCTGTACAGCCCAGAGAAATAAT 57.042 39.130 18.45 0.00 34.12 1.28
3610 5870 6.313519 TCTGTACAGCCCAGAGAAATAATT 57.686 37.500 18.45 0.00 34.12 1.40
3611 5871 6.115446 TCTGTACAGCCCAGAGAAATAATTG 58.885 40.000 18.45 0.00 34.12 2.32
3612 5872 6.061022 TGTACAGCCCAGAGAAATAATTGA 57.939 37.500 0.00 0.00 0.00 2.57
3613 5873 5.880332 TGTACAGCCCAGAGAAATAATTGAC 59.120 40.000 0.00 0.00 0.00 3.18
3614 5874 4.922206 ACAGCCCAGAGAAATAATTGACA 58.078 39.130 0.00 0.00 0.00 3.58
3615 5875 4.702131 ACAGCCCAGAGAAATAATTGACAC 59.298 41.667 0.00 0.00 0.00 3.67
3618 5878 5.649831 AGCCCAGAGAAATAATTGACACTTC 59.350 40.000 0.00 0.00 0.00 3.01
3621 5881 7.363268 GCCCAGAGAAATAATTGACACTTCATT 60.363 37.037 0.00 0.00 0.00 2.57
3623 5883 9.350357 CCAGAGAAATAATTGACACTTCATTTG 57.650 33.333 0.00 0.00 29.98 2.32
3626 5886 9.897744 GAGAAATAATTGACACTTCATTTGACA 57.102 29.630 0.00 0.00 29.98 3.58
3658 5918 2.394545 TTACACACTGAGTCGACACG 57.605 50.000 19.50 10.41 0.00 4.49
3659 5919 1.585297 TACACACTGAGTCGACACGA 58.415 50.000 19.50 0.00 0.00 4.35
3660 5920 0.952280 ACACACTGAGTCGACACGAT 59.048 50.000 19.50 0.25 38.42 3.73
3661 5921 1.337071 ACACACTGAGTCGACACGATT 59.663 47.619 19.50 0.00 38.42 3.34
3662 5922 2.223735 ACACACTGAGTCGACACGATTT 60.224 45.455 19.50 0.00 38.42 2.17
3663 5923 2.405357 CACACTGAGTCGACACGATTTC 59.595 50.000 19.50 5.79 38.42 2.17
3664 5924 2.293677 ACACTGAGTCGACACGATTTCT 59.706 45.455 19.50 0.00 38.42 2.52
3665 5925 3.243434 ACACTGAGTCGACACGATTTCTT 60.243 43.478 19.50 0.00 38.42 2.52
3666 5926 3.736252 CACTGAGTCGACACGATTTCTTT 59.264 43.478 19.50 0.00 38.42 2.52
3667 5927 3.736252 ACTGAGTCGACACGATTTCTTTG 59.264 43.478 19.50 3.26 38.42 2.77
3668 5928 3.713288 TGAGTCGACACGATTTCTTTGT 58.287 40.909 19.50 0.00 38.42 2.83
3669 5929 4.862350 TGAGTCGACACGATTTCTTTGTA 58.138 39.130 19.50 0.00 38.42 2.41
3670 5930 5.466819 TGAGTCGACACGATTTCTTTGTAT 58.533 37.500 19.50 0.00 38.42 2.29
3671 5931 5.344933 TGAGTCGACACGATTTCTTTGTATG 59.655 40.000 19.50 0.00 38.42 2.39
3672 5932 5.227908 AGTCGACACGATTTCTTTGTATGT 58.772 37.500 19.50 0.00 38.42 2.29
3673 5933 5.694910 AGTCGACACGATTTCTTTGTATGTT 59.305 36.000 19.50 0.00 38.42 2.71
3674 5934 6.202188 AGTCGACACGATTTCTTTGTATGTTT 59.798 34.615 19.50 0.00 38.42 2.83
3675 5935 6.299966 GTCGACACGATTTCTTTGTATGTTTG 59.700 38.462 11.55 0.00 38.42 2.93
3676 5936 5.058008 CGACACGATTTCTTTGTATGTTTGC 59.942 40.000 0.00 0.00 0.00 3.68
3677 5937 6.072112 ACACGATTTCTTTGTATGTTTGCT 57.928 33.333 0.00 0.00 0.00 3.91
3678 5938 6.503524 ACACGATTTCTTTGTATGTTTGCTT 58.496 32.000 0.00 0.00 0.00 3.91
3679 5939 6.417635 ACACGATTTCTTTGTATGTTTGCTTG 59.582 34.615 0.00 0.00 0.00 4.01
3680 5940 5.402270 ACGATTTCTTTGTATGTTTGCTTGC 59.598 36.000 0.00 0.00 0.00 4.01
3681 5941 5.401972 CGATTTCTTTGTATGTTTGCTTGCA 59.598 36.000 0.00 0.00 0.00 4.08
3682 5942 6.089820 CGATTTCTTTGTATGTTTGCTTGCAT 59.910 34.615 0.00 0.00 0.00 3.96
3683 5943 6.768029 TTTCTTTGTATGTTTGCTTGCATC 57.232 33.333 0.00 0.00 0.00 3.91
3684 5944 4.808558 TCTTTGTATGTTTGCTTGCATCC 58.191 39.130 0.00 0.00 0.00 3.51
3685 5945 4.280425 TCTTTGTATGTTTGCTTGCATCCA 59.720 37.500 0.00 0.00 0.00 3.41
3686 5946 4.804868 TTGTATGTTTGCTTGCATCCAT 57.195 36.364 10.72 10.72 0.00 3.41
3687 5947 4.374843 TGTATGTTTGCTTGCATCCATC 57.625 40.909 9.66 5.06 0.00 3.51
3688 5948 2.973694 ATGTTTGCTTGCATCCATCC 57.026 45.000 0.00 0.00 0.00 3.51
3689 5949 1.630223 TGTTTGCTTGCATCCATCCA 58.370 45.000 0.00 0.00 0.00 3.41
3690 5950 1.546923 TGTTTGCTTGCATCCATCCAG 59.453 47.619 0.00 0.00 0.00 3.86
3691 5951 1.547372 GTTTGCTTGCATCCATCCAGT 59.453 47.619 0.00 0.00 0.00 4.00
3692 5952 1.927487 TTGCTTGCATCCATCCAGTT 58.073 45.000 0.00 0.00 0.00 3.16
3694 5954 2.250031 TGCTTGCATCCATCCAGTTTT 58.750 42.857 0.00 0.00 0.00 2.43
3697 5957 4.282957 TGCTTGCATCCATCCAGTTTTTAA 59.717 37.500 0.00 0.00 0.00 1.52
3701 5961 4.282957 TGCATCCATCCAGTTTTTAAGCAA 59.717 37.500 0.00 0.00 0.00 3.91
3702 5962 5.046448 TGCATCCATCCAGTTTTTAAGCAAT 60.046 36.000 0.00 0.00 0.00 3.56
3717 5977 2.608467 GCAATGTGCTTGTCTGTCTC 57.392 50.000 0.00 0.00 40.96 3.36
3720 5980 3.144506 CAATGTGCTTGTCTGTCTCCTT 58.855 45.455 0.00 0.00 0.00 3.36
3721 5981 4.318332 CAATGTGCTTGTCTGTCTCCTTA 58.682 43.478 0.00 0.00 0.00 2.69
3722 5982 3.667497 TGTGCTTGTCTGTCTCCTTAG 57.333 47.619 0.00 0.00 0.00 2.18
3723 5983 2.289072 TGTGCTTGTCTGTCTCCTTAGC 60.289 50.000 0.00 0.00 0.00 3.09
3728 6027 4.083590 GCTTGTCTGTCTCCTTAGCTTTTG 60.084 45.833 0.00 0.00 0.00 2.44
3735 6034 6.828785 TCTGTCTCCTTAGCTTTTGTTTTTCT 59.171 34.615 0.00 0.00 0.00 2.52
3749 6048 6.431198 TTGTTTTTCTGACACTTGTAGGTC 57.569 37.500 0.00 0.00 34.63 3.85
3767 6066 0.947960 TCGGCAAAATTGAAGACGCA 59.052 45.000 0.00 0.00 0.00 5.24
3903 6202 2.288025 GGCGAGGGGGTTCAGTACA 61.288 63.158 0.00 0.00 0.00 2.90
3917 6216 4.884458 TCAGTACATCTGAGAGCTTACG 57.116 45.455 0.00 0.00 46.77 3.18
3921 6220 3.319137 ACATCTGAGAGCTTACGCAAA 57.681 42.857 0.00 0.00 39.10 3.68
3925 6224 3.664107 TCTGAGAGCTTACGCAAACATT 58.336 40.909 0.00 0.00 39.10 2.71
3926 6225 3.679980 TCTGAGAGCTTACGCAAACATTC 59.320 43.478 0.00 0.00 39.10 2.67
3927 6226 3.398406 TGAGAGCTTACGCAAACATTCA 58.602 40.909 0.00 0.00 39.10 2.57
3929 6228 4.274705 TGAGAGCTTACGCAAACATTCAAA 59.725 37.500 0.00 0.00 39.10 2.69
3930 6229 4.537015 AGAGCTTACGCAAACATTCAAAC 58.463 39.130 0.00 0.00 39.10 2.93
3931 6230 4.275936 AGAGCTTACGCAAACATTCAAACT 59.724 37.500 0.00 0.00 39.10 2.66
3932 6231 4.932146 AGCTTACGCAAACATTCAAACTT 58.068 34.783 0.00 0.00 39.10 2.66
3933 6232 4.976116 AGCTTACGCAAACATTCAAACTTC 59.024 37.500 0.00 0.00 39.10 3.01
3934 6233 4.976116 GCTTACGCAAACATTCAAACTTCT 59.024 37.500 0.00 0.00 35.78 2.85
3935 6234 5.458779 GCTTACGCAAACATTCAAACTTCTT 59.541 36.000 0.00 0.00 35.78 2.52
3936 6235 6.345015 GCTTACGCAAACATTCAAACTTCTTC 60.345 38.462 0.00 0.00 35.78 2.87
3937 6236 4.992688 ACGCAAACATTCAAACTTCTTCA 58.007 34.783 0.00 0.00 0.00 3.02
3938 6237 5.036737 ACGCAAACATTCAAACTTCTTCAG 58.963 37.500 0.00 0.00 0.00 3.02
3939 6238 5.036737 CGCAAACATTCAAACTTCTTCAGT 58.963 37.500 0.00 0.00 37.30 3.41
3940 6239 6.183360 ACGCAAACATTCAAACTTCTTCAGTA 60.183 34.615 0.00 0.00 32.94 2.74
3941 6240 6.140737 CGCAAACATTCAAACTTCTTCAGTAC 59.859 38.462 0.00 0.00 32.94 2.73
3942 6241 6.972328 GCAAACATTCAAACTTCTTCAGTACA 59.028 34.615 0.00 0.00 32.94 2.90
3943 6242 7.649306 GCAAACATTCAAACTTCTTCAGTACAT 59.351 33.333 0.00 0.00 32.94 2.29
3944 6243 9.173939 CAAACATTCAAACTTCTTCAGTACATC 57.826 33.333 0.00 0.00 32.94 3.06
3945 6244 8.682936 AACATTCAAACTTCTTCAGTACATCT 57.317 30.769 0.00 0.00 32.94 2.90
3946 6245 8.092521 ACATTCAAACTTCTTCAGTACATCTG 57.907 34.615 0.00 0.00 44.85 2.90
3956 6255 4.884458 TCAGTACATCTGAGAGCTTACG 57.116 45.455 0.00 0.00 46.77 3.18
3957 6256 3.065510 TCAGTACATCTGAGAGCTTACGC 59.934 47.826 0.00 0.00 46.77 4.42
3958 6257 3.017442 AGTACATCTGAGAGCTTACGCA 58.983 45.455 0.00 0.00 39.10 5.24
3959 6258 3.444034 AGTACATCTGAGAGCTTACGCAA 59.556 43.478 0.00 0.00 39.10 4.85
3960 6259 3.319137 ACATCTGAGAGCTTACGCAAA 57.681 42.857 0.00 0.00 39.10 3.68
3961 6260 2.996621 ACATCTGAGAGCTTACGCAAAC 59.003 45.455 0.00 0.00 39.10 2.93
3962 6261 2.812358 TCTGAGAGCTTACGCAAACA 57.188 45.000 0.00 0.00 39.10 2.83
3963 6262 3.319137 TCTGAGAGCTTACGCAAACAT 57.681 42.857 0.00 0.00 39.10 2.71
3964 6263 3.664107 TCTGAGAGCTTACGCAAACATT 58.336 40.909 0.00 0.00 39.10 2.71
3965 6264 3.679980 TCTGAGAGCTTACGCAAACATTC 59.320 43.478 0.00 0.00 39.10 2.67
3979 6278 5.345741 CGCAAACATTCAAACTTCTAATGGG 59.654 40.000 0.00 0.00 35.40 4.00
4000 6299 4.096984 GGGTGAGAATTGTTTAGCTGATGG 59.903 45.833 0.00 0.00 0.00 3.51
4001 6300 4.096984 GGTGAGAATTGTTTAGCTGATGGG 59.903 45.833 0.00 0.00 0.00 4.00
4002 6301 3.696051 TGAGAATTGTTTAGCTGATGGGC 59.304 43.478 0.00 0.00 0.00 5.36
4003 6302 3.696051 GAGAATTGTTTAGCTGATGGGCA 59.304 43.478 0.00 0.00 34.17 5.36
4004 6303 4.088634 AGAATTGTTTAGCTGATGGGCAA 58.911 39.130 0.00 0.00 34.17 4.52
4005 6304 4.527816 AGAATTGTTTAGCTGATGGGCAAA 59.472 37.500 0.00 0.00 34.17 3.68
4006 6305 3.940209 TTGTTTAGCTGATGGGCAAAG 57.060 42.857 0.00 0.00 34.17 2.77
4007 6306 2.875296 TGTTTAGCTGATGGGCAAAGT 58.125 42.857 0.00 0.00 34.17 2.66
4052 6359 3.722728 AATCTTACGGGGCTAAGTACG 57.277 47.619 0.00 0.00 0.00 3.67
4053 6360 2.128771 TCTTACGGGGCTAAGTACGT 57.871 50.000 0.00 0.00 42.71 3.57
4054 6361 2.017049 TCTTACGGGGCTAAGTACGTC 58.983 52.381 0.00 0.00 40.38 4.34
4055 6362 0.732571 TTACGGGGCTAAGTACGTCG 59.267 55.000 0.00 0.00 40.38 5.12
4117 6437 5.982890 ACAGGAATAATGTTTCTGGGTTG 57.017 39.130 3.10 0.00 0.00 3.77
4169 6489 2.674852 CCATCCTGAACATCACTTCACG 59.325 50.000 0.00 0.00 0.00 4.35
4187 6507 0.734889 CGGTTGATGTGAATGCCTCC 59.265 55.000 0.00 0.00 0.00 4.30
4298 6619 4.766891 GGGGAGACTGAAATGAAACATTGA 59.233 41.667 0.00 0.00 0.00 2.57
4305 6626 4.309099 TGAAATGAAACATTGAGGCTTGC 58.691 39.130 0.00 0.00 0.00 4.01
4310 6631 3.254166 TGAAACATTGAGGCTTGCTTCTC 59.746 43.478 6.31 0.00 0.00 2.87
4316 6641 0.321475 GAGGCTTGCTTCTCTGTGCT 60.321 55.000 0.00 0.00 0.00 4.40
4325 6650 2.354503 GCTTCTCTGTGCTGAATGAGGA 60.355 50.000 0.00 0.00 0.00 3.71
4337 6669 5.163227 TGCTGAATGAGGAGCATCTAGAAAT 60.163 40.000 0.00 0.00 40.30 2.17
4375 6711 1.473965 CCAAGCGCATGGACTACAGAT 60.474 52.381 27.05 0.00 43.54 2.90
4376 6712 2.283298 CAAGCGCATGGACTACAGATT 58.717 47.619 11.47 0.00 0.00 2.40
4377 6713 2.679837 CAAGCGCATGGACTACAGATTT 59.320 45.455 11.47 0.00 0.00 2.17
4378 6714 2.991250 AGCGCATGGACTACAGATTTT 58.009 42.857 11.47 0.00 0.00 1.82
4379 6715 2.939103 AGCGCATGGACTACAGATTTTC 59.061 45.455 11.47 0.00 0.00 2.29
4380 6716 2.285834 GCGCATGGACTACAGATTTTCG 60.286 50.000 0.30 0.00 0.00 3.46
4382 6718 3.242091 CGCATGGACTACAGATTTTCGTG 60.242 47.826 0.00 0.00 0.00 4.35
4383 6719 3.063997 GCATGGACTACAGATTTTCGTGG 59.936 47.826 0.00 0.00 0.00 4.94
4384 6720 4.253685 CATGGACTACAGATTTTCGTGGT 58.746 43.478 0.00 0.00 0.00 4.16
4395 6735 1.246649 TTTCGTGGTCATGCATTGCT 58.753 45.000 10.49 0.00 0.00 3.91
4396 6736 2.106477 TTCGTGGTCATGCATTGCTA 57.894 45.000 10.49 0.00 0.00 3.49
4404 6744 4.191544 GGTCATGCATTGCTACAGAGTTA 58.808 43.478 10.49 0.00 0.00 2.24
4408 6748 2.993220 TGCATTGCTACAGAGTTACACG 59.007 45.455 10.49 0.00 0.00 4.49
4414 6754 3.056821 TGCTACAGAGTTACACGATTGCT 60.057 43.478 0.00 0.00 0.00 3.91
4437 6777 9.031360 TGCTACGCAACTTAATAAAGATAAGAG 57.969 33.333 0.67 0.00 34.76 2.85
4438 6778 9.032420 GCTACGCAACTTAATAAAGATAAGAGT 57.968 33.333 0.67 0.00 36.50 3.24
4481 6837 9.981114 AAAAACCGAGTTATTTGAATGATTTCT 57.019 25.926 0.00 0.00 32.78 2.52
4483 6839 9.626045 AAACCGAGTTATTTGAATGATTTCTTC 57.374 29.630 0.00 0.00 32.78 2.87
4485 6841 8.669243 ACCGAGTTATTTGAATGATTTCTTCTC 58.331 33.333 0.00 0.00 32.78 2.87
4487 6843 7.848051 CGAGTTATTTGAATGATTTCTTCTCCG 59.152 37.037 0.00 0.00 32.78 4.63
4488 6844 8.567285 AGTTATTTGAATGATTTCTTCTCCGT 57.433 30.769 0.00 0.00 32.78 4.69
4489 6845 9.667107 AGTTATTTGAATGATTTCTTCTCCGTA 57.333 29.630 0.00 0.00 32.78 4.02
4494 6850 9.624697 TTTGAATGATTTCTTCTCCGTATTTTG 57.375 29.630 0.00 0.00 32.78 2.44
4495 6851 7.250569 TGAATGATTTCTTCTCCGTATTTTGC 58.749 34.615 0.00 0.00 32.78 3.68
4507 6877 4.275689 TCCGTATTTTGCTTGCATCCATAG 59.724 41.667 0.00 0.00 0.00 2.23
4511 6881 4.454728 TTTTGCTTGCATCCATAGGAAC 57.545 40.909 0.00 0.00 34.34 3.62
4517 6887 5.046448 TGCTTGCATCCATAGGAACAAAATT 60.046 36.000 0.00 0.00 33.53 1.82
4533 6903 8.644619 GGAACAAAATTAATAAGAAACGAAGGC 58.355 33.333 0.00 0.00 0.00 4.35
4536 6906 7.536281 ACAAAATTAATAAGAAACGAAGGCGAC 59.464 33.333 0.00 0.00 41.64 5.19
4572 6955 8.571336 AGGAGAAAACAGAAACATTATGAACAG 58.429 33.333 0.00 0.00 0.00 3.16
4573 6956 7.809806 GGAGAAAACAGAAACATTATGAACAGG 59.190 37.037 0.00 0.00 0.00 4.00
4574 6957 8.463930 AGAAAACAGAAACATTATGAACAGGA 57.536 30.769 0.00 0.00 0.00 3.86
4575 6958 8.571336 AGAAAACAGAAACATTATGAACAGGAG 58.429 33.333 0.00 0.00 0.00 3.69
4576 6959 6.824305 AACAGAAACATTATGAACAGGAGG 57.176 37.500 0.00 0.00 0.00 4.30
4578 6961 4.096984 CAGAAACATTATGAACAGGAGGGC 59.903 45.833 0.00 0.00 0.00 5.19
4579 6962 2.736670 ACATTATGAACAGGAGGGCC 57.263 50.000 0.00 0.00 0.00 5.80
4607 6990 2.027073 GTCGAAGCACACGCCATGA 61.027 57.895 0.00 0.00 39.83 3.07
4608 6991 1.079197 TCGAAGCACACGCCATGAT 60.079 52.632 0.00 0.00 39.83 2.45
4611 6994 1.070376 CGAAGCACACGCCATGATATG 60.070 52.381 0.00 0.00 39.83 1.78
4613 6996 1.168407 AGCACACGCCATGATATGCC 61.168 55.000 0.00 0.00 39.83 4.40
4614 6997 1.446516 GCACACGCCATGATATGCCA 61.447 55.000 0.00 0.00 0.00 4.92
4615 6998 1.023502 CACACGCCATGATATGCCAA 58.976 50.000 0.00 0.00 0.00 4.52
4616 6999 1.024271 ACACGCCATGATATGCCAAC 58.976 50.000 0.00 0.00 0.00 3.77
4617 7000 0.041047 CACGCCATGATATGCCAACG 60.041 55.000 0.00 0.00 0.00 4.10
4618 7001 0.179059 ACGCCATGATATGCCAACGA 60.179 50.000 0.00 0.00 0.00 3.85
4619 7002 0.235665 CGCCATGATATGCCAACGAC 59.764 55.000 0.00 0.00 0.00 4.34
4620 7003 0.235665 GCCATGATATGCCAACGACG 59.764 55.000 0.00 0.00 0.00 5.12
4621 7004 1.581934 CCATGATATGCCAACGACGT 58.418 50.000 0.00 0.00 0.00 4.34
4622 7005 1.261354 CCATGATATGCCAACGACGTG 59.739 52.381 0.00 0.00 0.00 4.49
4623 7006 2.200899 CATGATATGCCAACGACGTGA 58.799 47.619 0.00 0.00 0.00 4.35
4624 7007 2.371910 TGATATGCCAACGACGTGAA 57.628 45.000 0.00 0.00 0.00 3.18
4625 7008 1.996898 TGATATGCCAACGACGTGAAC 59.003 47.619 0.00 0.00 0.00 3.18
4626 7009 1.996898 GATATGCCAACGACGTGAACA 59.003 47.619 0.00 0.00 0.00 3.18
4628 7011 1.227999 ATGCCAACGACGTGAACAGG 61.228 55.000 0.00 0.20 0.00 4.00
4629 7012 1.593209 GCCAACGACGTGAACAGGA 60.593 57.895 0.00 0.00 0.00 3.86
4630 7013 0.949105 GCCAACGACGTGAACAGGAT 60.949 55.000 0.00 0.00 0.00 3.24
4643 7026 4.166888 AGGATGTCGCCGCAGCAT 62.167 61.111 0.00 0.00 39.83 3.79
4644 7027 3.945434 GGATGTCGCCGCAGCATG 61.945 66.667 1.89 0.00 39.83 4.06
4645 7028 3.197790 GATGTCGCCGCAGCATGT 61.198 61.111 0.00 0.00 39.83 3.21
4646 7029 3.160557 GATGTCGCCGCAGCATGTC 62.161 63.158 0.00 0.00 39.83 3.06
4647 7030 3.956305 ATGTCGCCGCAGCATGTCA 62.956 57.895 0.00 0.00 39.83 3.58
4648 7031 3.857854 GTCGCCGCAGCATGTCAG 61.858 66.667 0.00 0.00 39.83 3.51
4649 7032 4.067913 TCGCCGCAGCATGTCAGA 62.068 61.111 0.00 0.00 39.83 3.27
4650 7033 2.893895 CGCCGCAGCATGTCAGAT 60.894 61.111 0.00 0.00 39.83 2.90
4651 7034 2.879070 CGCCGCAGCATGTCAGATC 61.879 63.158 0.00 0.00 39.83 2.75
4652 7035 2.879070 GCCGCAGCATGTCAGATCG 61.879 63.158 0.00 0.00 39.31 3.69
4653 7036 2.242572 CCGCAGCATGTCAGATCGG 61.243 63.158 0.00 0.00 39.31 4.18
4654 7037 2.879070 CGCAGCATGTCAGATCGGC 61.879 63.158 0.00 0.00 39.31 5.54
4656 7039 1.520120 CAGCATGTCAGATCGGCGT 60.520 57.895 6.85 0.00 0.00 5.68
4657 7040 1.227089 AGCATGTCAGATCGGCGTC 60.227 57.895 6.85 3.93 0.00 5.19
4658 7041 2.580470 GCATGTCAGATCGGCGTCG 61.580 63.158 1.15 1.15 37.82 5.12
4660 7043 2.415608 ATGTCAGATCGGCGTCGGT 61.416 57.895 10.62 0.00 36.95 4.69
4781 7166 3.717294 CTTGTAGGCGGCCACCCT 61.717 66.667 23.09 15.67 36.47 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 3.173240 GAGTTCCTCGCGTGCGTC 61.173 66.667 14.47 0.00 40.74 5.19
40 41 4.966787 TGCTTCCCCAACACCGCC 62.967 66.667 0.00 0.00 0.00 6.13
41 42 3.670377 GTGCTTCCCCAACACCGC 61.670 66.667 0.00 0.00 0.00 5.68
42 43 3.353836 CGTGCTTCCCCAACACCG 61.354 66.667 0.00 0.00 0.00 4.94
43 44 2.983592 CCGTGCTTCCCCAACACC 60.984 66.667 0.00 0.00 0.00 4.16
44 45 2.983592 CCCGTGCTTCCCCAACAC 60.984 66.667 0.00 0.00 0.00 3.32
45 46 3.172106 TCCCGTGCTTCCCCAACA 61.172 61.111 0.00 0.00 0.00 3.33
46 47 2.359975 CTCCCGTGCTTCCCCAAC 60.360 66.667 0.00 0.00 0.00 3.77
47 48 3.646715 CCTCCCGTGCTTCCCCAA 61.647 66.667 0.00 0.00 0.00 4.12
50 51 4.097361 GTCCCTCCCGTGCTTCCC 62.097 72.222 0.00 0.00 0.00 3.97
51 52 4.452733 CGTCCCTCCCGTGCTTCC 62.453 72.222 0.00 0.00 0.00 3.46
52 53 4.452733 CCGTCCCTCCCGTGCTTC 62.453 72.222 0.00 0.00 0.00 3.86
54 55 4.779733 ATCCGTCCCTCCCGTGCT 62.780 66.667 0.00 0.00 0.00 4.40
55 56 4.222847 GATCCGTCCCTCCCGTGC 62.223 72.222 0.00 0.00 0.00 5.34
56 57 3.537874 GGATCCGTCCCTCCCGTG 61.538 72.222 0.00 0.00 38.69 4.94
57 58 4.070265 TGGATCCGTCCCTCCCGT 62.070 66.667 7.39 0.00 44.41 5.28
58 59 3.537874 GTGGATCCGTCCCTCCCG 61.538 72.222 7.39 0.00 44.41 5.14
59 60 3.162154 GGTGGATCCGTCCCTCCC 61.162 72.222 7.39 0.00 44.41 4.30
60 61 3.162154 GGGTGGATCCGTCCCTCC 61.162 72.222 27.71 14.37 44.41 4.30
61 62 3.162154 GGGGTGGATCCGTCCCTC 61.162 72.222 31.08 22.04 44.41 4.30
105 106 4.893601 GAGGCGCCCGCTTCTACC 62.894 72.222 26.15 0.00 42.82 3.18
106 107 4.893601 GGAGGCGCCCGCTTCTAC 62.894 72.222 26.15 0.00 45.02 2.59
126 127 4.783621 TCCATCTGCTGCCACCGC 62.784 66.667 0.00 0.00 0.00 5.68
127 128 1.890979 GATCCATCTGCTGCCACCG 60.891 63.158 0.00 0.00 0.00 4.94
128 129 0.534652 GAGATCCATCTGCTGCCACC 60.535 60.000 0.00 0.00 37.25 4.61
129 130 0.879400 CGAGATCCATCTGCTGCCAC 60.879 60.000 0.00 0.00 37.25 5.01
130 131 1.044790 TCGAGATCCATCTGCTGCCA 61.045 55.000 0.00 0.00 37.25 4.92
131 132 0.319727 CTCGAGATCCATCTGCTGCC 60.320 60.000 6.58 0.00 37.25 4.85
132 133 0.672889 TCTCGAGATCCATCTGCTGC 59.327 55.000 12.08 0.00 37.25 5.25
133 134 1.270274 CCTCTCGAGATCCATCTGCTG 59.730 57.143 17.03 0.00 37.25 4.41
134 135 1.619654 CCTCTCGAGATCCATCTGCT 58.380 55.000 17.03 0.00 37.25 4.24
135 136 0.602562 CCCTCTCGAGATCCATCTGC 59.397 60.000 17.03 0.00 37.25 4.26
136 137 1.255882 CCCCTCTCGAGATCCATCTG 58.744 60.000 17.03 1.82 37.25 2.90
137 138 0.541764 GCCCCTCTCGAGATCCATCT 60.542 60.000 17.03 0.00 40.50 2.90
138 139 1.872197 CGCCCCTCTCGAGATCCATC 61.872 65.000 17.03 3.88 0.00 3.51
139 140 1.905843 CGCCCCTCTCGAGATCCAT 60.906 63.158 17.03 0.00 0.00 3.41
140 141 2.519541 CGCCCCTCTCGAGATCCA 60.520 66.667 17.03 0.00 0.00 3.41
141 142 3.984749 GCGCCCCTCTCGAGATCC 61.985 72.222 17.03 3.80 0.00 3.36
142 143 4.335584 CGCGCCCCTCTCGAGATC 62.336 72.222 17.03 4.94 0.00 2.75
159 160 3.591254 AACTCGCGTCTGCTTCCCC 62.591 63.158 5.77 0.00 39.65 4.81
160 161 2.048127 AACTCGCGTCTGCTTCCC 60.048 61.111 5.77 0.00 39.65 3.97
161 162 2.383527 CCAACTCGCGTCTGCTTCC 61.384 63.158 5.77 0.00 39.65 3.46
162 163 2.383527 CCCAACTCGCGTCTGCTTC 61.384 63.158 5.77 0.00 39.65 3.86
163 164 2.357517 CCCAACTCGCGTCTGCTT 60.358 61.111 5.77 0.00 39.65 3.91
164 165 4.379243 CCCCAACTCGCGTCTGCT 62.379 66.667 5.77 0.00 39.65 4.24
165 166 4.373116 TCCCCAACTCGCGTCTGC 62.373 66.667 5.77 0.00 37.91 4.26
166 167 2.125912 CTCCCCAACTCGCGTCTG 60.126 66.667 5.77 1.64 0.00 3.51
167 168 2.282958 TCTCCCCAACTCGCGTCT 60.283 61.111 5.77 0.00 0.00 4.18
168 169 2.126031 GTCTCCCCAACTCGCGTC 60.126 66.667 5.77 0.00 0.00 5.19
169 170 4.052229 CGTCTCCCCAACTCGCGT 62.052 66.667 5.77 0.00 0.00 6.01
170 171 4.796231 CCGTCTCCCCAACTCGCG 62.796 72.222 0.00 0.00 0.00 5.87
171 172 2.630592 GATCCGTCTCCCCAACTCGC 62.631 65.000 0.00 0.00 0.00 5.03
172 173 1.437986 GATCCGTCTCCCCAACTCG 59.562 63.158 0.00 0.00 0.00 4.18
173 174 1.823976 GGATCCGTCTCCCCAACTC 59.176 63.158 0.00 0.00 0.00 3.01
174 175 2.058595 CGGATCCGTCTCCCCAACT 61.059 63.158 26.35 0.00 34.35 3.16
175 176 2.499685 CGGATCCGTCTCCCCAAC 59.500 66.667 26.35 0.00 34.35 3.77
176 177 3.467226 GCGGATCCGTCTCCCCAA 61.467 66.667 33.33 0.00 42.09 4.12
336 337 0.359205 CGAGACGAGCGAAAGAAACG 59.641 55.000 0.00 0.00 0.00 3.60
337 338 1.122680 CACGAGACGAGCGAAAGAAAC 59.877 52.381 0.00 0.00 0.00 2.78
338 339 1.268896 ACACGAGACGAGCGAAAGAAA 60.269 47.619 0.00 0.00 0.00 2.52
339 340 0.309922 ACACGAGACGAGCGAAAGAA 59.690 50.000 0.00 0.00 0.00 2.52
340 341 1.128136 CTACACGAGACGAGCGAAAGA 59.872 52.381 0.00 0.00 0.00 2.52
341 342 1.136029 ACTACACGAGACGAGCGAAAG 60.136 52.381 0.00 0.00 0.00 2.62
342 343 0.870393 ACTACACGAGACGAGCGAAA 59.130 50.000 0.00 0.00 0.00 3.46
343 344 0.441533 GACTACACGAGACGAGCGAA 59.558 55.000 0.00 0.00 0.00 4.70
344 345 0.668401 TGACTACACGAGACGAGCGA 60.668 55.000 0.00 0.00 0.00 4.93
345 346 0.374063 ATGACTACACGAGACGAGCG 59.626 55.000 0.00 0.00 0.00 5.03
346 347 1.532090 CCATGACTACACGAGACGAGC 60.532 57.143 0.00 0.00 0.00 5.03
347 348 1.064208 CCCATGACTACACGAGACGAG 59.936 57.143 0.00 0.00 0.00 4.18
348 349 1.092348 CCCATGACTACACGAGACGA 58.908 55.000 0.00 0.00 0.00 4.20
349 350 0.809385 ACCCATGACTACACGAGACG 59.191 55.000 0.00 0.00 0.00 4.18
350 351 1.135083 CCACCCATGACTACACGAGAC 60.135 57.143 0.00 0.00 0.00 3.36
351 352 1.182667 CCACCCATGACTACACGAGA 58.817 55.000 0.00 0.00 0.00 4.04
352 353 0.895530 ACCACCCATGACTACACGAG 59.104 55.000 0.00 0.00 0.00 4.18
353 354 0.606096 CACCACCCATGACTACACGA 59.394 55.000 0.00 0.00 0.00 4.35
354 355 0.320374 ACACCACCCATGACTACACG 59.680 55.000 0.00 0.00 0.00 4.49
355 356 2.300723 TGTACACCACCCATGACTACAC 59.699 50.000 0.00 0.00 0.00 2.90
356 357 2.610873 TGTACACCACCCATGACTACA 58.389 47.619 0.00 0.00 0.00 2.74
357 358 3.055385 ACATGTACACCACCCATGACTAC 60.055 47.826 0.00 0.00 38.56 2.73
358 359 3.178046 ACATGTACACCACCCATGACTA 58.822 45.455 0.00 0.00 38.56 2.59
359 360 1.985159 ACATGTACACCACCCATGACT 59.015 47.619 0.00 0.00 38.56 3.41
360 361 2.489938 ACATGTACACCACCCATGAC 57.510 50.000 0.00 0.00 38.56 3.06
361 362 3.621214 GCTAACATGTACACCACCCATGA 60.621 47.826 0.00 0.00 38.56 3.07
362 363 2.682856 GCTAACATGTACACCACCCATG 59.317 50.000 0.00 0.00 41.31 3.66
363 364 2.576191 AGCTAACATGTACACCACCCAT 59.424 45.455 0.00 0.00 0.00 4.00
364 365 1.982226 AGCTAACATGTACACCACCCA 59.018 47.619 0.00 0.00 0.00 4.51
365 366 2.236395 AGAGCTAACATGTACACCACCC 59.764 50.000 0.00 0.00 0.00 4.61
366 367 3.195825 AGAGAGCTAACATGTACACCACC 59.804 47.826 0.00 0.00 0.00 4.61
367 368 4.425520 GAGAGAGCTAACATGTACACCAC 58.574 47.826 0.00 0.00 0.00 4.16
368 369 3.128764 CGAGAGAGCTAACATGTACACCA 59.871 47.826 0.00 0.00 0.00 4.17
369 370 3.128938 ACGAGAGAGCTAACATGTACACC 59.871 47.826 0.00 0.00 0.00 4.16
370 371 4.099120 CACGAGAGAGCTAACATGTACAC 58.901 47.826 0.00 0.00 0.00 2.90
371 372 4.007659 TCACGAGAGAGCTAACATGTACA 58.992 43.478 0.00 0.00 0.00 2.90
372 373 4.095185 AGTCACGAGAGAGCTAACATGTAC 59.905 45.833 0.00 0.00 0.00 2.90
373 374 4.262617 AGTCACGAGAGAGCTAACATGTA 58.737 43.478 0.00 0.00 0.00 2.29
374 375 3.085533 AGTCACGAGAGAGCTAACATGT 58.914 45.455 0.00 0.00 0.00 3.21
375 376 3.773860 AGTCACGAGAGAGCTAACATG 57.226 47.619 0.00 0.00 0.00 3.21
376 377 3.508012 ACAAGTCACGAGAGAGCTAACAT 59.492 43.478 0.00 0.00 0.00 2.71
377 378 2.885266 ACAAGTCACGAGAGAGCTAACA 59.115 45.455 0.00 0.00 0.00 2.41
378 379 3.562567 ACAAGTCACGAGAGAGCTAAC 57.437 47.619 0.00 0.00 0.00 2.34
391 392 1.546773 GGGGCACAACCATACAAGTCA 60.547 52.381 0.00 0.00 42.05 3.41
392 393 1.173913 GGGGCACAACCATACAAGTC 58.826 55.000 0.00 0.00 42.05 3.01
415 416 9.569122 TTGCCAGGAAATATATTAGGACTTTAC 57.431 33.333 0.00 0.00 0.00 2.01
420 421 6.003950 TGCTTGCCAGGAAATATATTAGGAC 58.996 40.000 0.00 0.00 0.00 3.85
421 422 6.199557 TGCTTGCCAGGAAATATATTAGGA 57.800 37.500 0.00 0.00 0.00 2.94
432 433 2.037901 TGACAATTTGCTTGCCAGGAA 58.962 42.857 0.00 0.00 38.50 3.36
509 510 8.940397 ATTAAAATTCATCTCCCGAATACCAT 57.060 30.769 0.00 0.00 32.79 3.55
525 526 9.860898 ACTGCAAACTATCTGGAATTAAAATTC 57.139 29.630 6.85 6.85 43.12 2.17
527 528 9.023962 TCACTGCAAACTATCTGGAATTAAAAT 57.976 29.630 0.00 0.00 0.00 1.82
537 538 3.332919 AGCTGTCACTGCAAACTATCTG 58.667 45.455 9.60 0.00 0.00 2.90
556 557 5.438761 TTCTTAGAAGCACCAGAAAAAGC 57.561 39.130 0.00 0.00 0.00 3.51
596 597 3.055719 GACGTCCCGACCCGTGTA 61.056 66.667 3.51 0.00 37.44 2.90
627 628 3.749609 ACGAACACATTTAGCTTGGGTAC 59.250 43.478 0.00 0.00 28.51 3.34
637 638 5.410355 ACCCTTAGCTACGAACACATTTA 57.590 39.130 0.00 0.00 0.00 1.40
648 649 4.778534 GGGAACAAAAACCCTTAGCTAC 57.221 45.455 0.00 0.00 42.56 3.58
660 661 9.635404 TTTGTTAGAGATAAAGAGGGAACAAAA 57.365 29.630 7.03 0.00 40.58 2.44
726 727 7.591426 GTGAGTGCTTCGAAAATGTTCTTAATT 59.409 33.333 0.00 0.00 0.00 1.40
729 730 5.758296 AGTGAGTGCTTCGAAAATGTTCTTA 59.242 36.000 0.00 0.00 0.00 2.10
746 747 5.180117 CACTTATTTTGGGACAGAGTGAGTG 59.820 44.000 0.00 0.00 39.37 3.51
751 752 4.141251 ACCACACTTATTTTGGGACAGAGT 60.141 41.667 0.00 0.00 42.39 3.24
752 753 4.216257 CACCACACTTATTTTGGGACAGAG 59.784 45.833 0.00 0.00 42.39 3.35
755 756 3.226777 CCACCACACTTATTTTGGGACA 58.773 45.455 0.00 0.00 34.41 4.02
757 758 3.603965 ACCACCACACTTATTTTGGGA 57.396 42.857 0.00 0.00 34.41 4.37
760 761 7.976734 TGAACTAAAACCACCACACTTATTTTG 59.023 33.333 0.00 0.00 0.00 2.44
761 762 8.068892 TGAACTAAAACCACCACACTTATTTT 57.931 30.769 0.00 0.00 0.00 1.82
772 773 6.838198 GGTTTCATTTGAACTAAAACCACC 57.162 37.500 9.75 0.36 45.22 4.61
804 805 8.544687 AACTATACTCCCTCCGTACTAAAATT 57.455 34.615 0.00 0.00 0.00 1.82
849 861 9.818796 GAAATTGTGCTTGTTTTTGTTAGAAAA 57.181 25.926 0.00 0.00 0.00 2.29
850 862 8.447053 GGAAATTGTGCTTGTTTTTGTTAGAAA 58.553 29.630 0.00 0.00 0.00 2.52
851 863 7.604164 TGGAAATTGTGCTTGTTTTTGTTAGAA 59.396 29.630 0.00 0.00 0.00 2.10
852 864 7.099764 TGGAAATTGTGCTTGTTTTTGTTAGA 58.900 30.769 0.00 0.00 0.00 2.10
853 865 7.301068 TGGAAATTGTGCTTGTTTTTGTTAG 57.699 32.000 0.00 0.00 0.00 2.34
854 866 7.856145 ATGGAAATTGTGCTTGTTTTTGTTA 57.144 28.000 0.00 0.00 0.00 2.41
855 867 6.756299 ATGGAAATTGTGCTTGTTTTTGTT 57.244 29.167 0.00 0.00 0.00 2.83
856 868 6.756299 AATGGAAATTGTGCTTGTTTTTGT 57.244 29.167 0.00 0.00 0.00 2.83
857 869 8.463456 AAAAATGGAAATTGTGCTTGTTTTTG 57.537 26.923 0.00 0.00 0.00 2.44
924 950 2.828549 GGATGGGTGCGCCGAATT 60.829 61.111 10.86 0.00 34.97 2.17
948 975 2.449031 TTTGGATGCTCTCGTGCGGT 62.449 55.000 0.00 0.00 35.36 5.68
1304 1349 3.119919 GCAAGCAAAGATGAGGAAGAGTG 60.120 47.826 0.00 0.00 0.00 3.51
1320 1365 0.401738 AGTAGCAGGAAAGGCAAGCA 59.598 50.000 0.00 0.00 0.00 3.91
1324 1369 2.627699 CCAAAAAGTAGCAGGAAAGGCA 59.372 45.455 0.00 0.00 0.00 4.75
1327 1372 3.823304 AGAGCCAAAAAGTAGCAGGAAAG 59.177 43.478 0.00 0.00 0.00 2.62
1353 1398 4.760047 CAAGAGGGACCGCCGGTG 62.760 72.222 16.53 8.42 35.25 4.94
1400 1704 1.004745 ACGGATTTCCTGCCTGTCAAT 59.995 47.619 0.00 0.00 0.00 2.57
1405 1709 0.962356 AGCAACGGATTTCCTGCCTG 60.962 55.000 7.10 0.00 37.77 4.85
1407 1711 1.459450 TAAGCAACGGATTTCCTGCC 58.541 50.000 7.10 0.00 37.77 4.85
1512 1828 2.665603 GCCCCCTCTCACTGACAC 59.334 66.667 0.00 0.00 0.00 3.67
1534 1851 5.599656 ACCAAACAGTAGTAGTACCTCACAA 59.400 40.000 4.02 0.00 0.00 3.33
1537 1854 6.306199 TGTACCAAACAGTAGTAGTACCTCA 58.694 40.000 4.02 0.00 32.32 3.86
1560 1880 1.536766 CCGCACCTGCCAACATATATG 59.463 52.381 11.29 11.29 37.91 1.78
1571 1900 1.294659 CTCTCACTTTCCGCACCTGC 61.295 60.000 0.00 0.00 37.78 4.85
1578 1907 6.787085 ACAATAAGAAACTCTCACTTTCCG 57.213 37.500 0.00 0.00 0.00 4.30
1603 1932 7.148205 ACACTACGACACTACAAAAATGGTTTT 60.148 33.333 0.00 0.00 37.43 2.43
1604 1933 6.316890 ACACTACGACACTACAAAAATGGTTT 59.683 34.615 0.00 0.00 0.00 3.27
1605 1934 5.818857 ACACTACGACACTACAAAAATGGTT 59.181 36.000 0.00 0.00 0.00 3.67
1606 1935 5.362263 ACACTACGACACTACAAAAATGGT 58.638 37.500 0.00 0.00 0.00 3.55
1608 1937 6.519353 TGACACTACGACACTACAAAAATG 57.481 37.500 0.00 0.00 0.00 2.32
1609 1938 7.542534 TTTGACACTACGACACTACAAAAAT 57.457 32.000 0.00 0.00 0.00 1.82
1610 1939 6.964741 TTTGACACTACGACACTACAAAAA 57.035 33.333 0.00 0.00 0.00 1.94
1611 1940 6.964741 TTTTGACACTACGACACTACAAAA 57.035 33.333 0.00 0.00 34.95 2.44
1614 1943 5.464057 CCATTTTTGACACTACGACACTACA 59.536 40.000 0.00 0.00 0.00 2.74
1615 1944 5.464389 ACCATTTTTGACACTACGACACTAC 59.536 40.000 0.00 0.00 0.00 2.73
1618 1947 4.510340 AGACCATTTTTGACACTACGACAC 59.490 41.667 0.00 0.00 0.00 3.67
1619 1948 4.699637 AGACCATTTTTGACACTACGACA 58.300 39.130 0.00 0.00 0.00 4.35
1620 1949 5.668558 AAGACCATTTTTGACACTACGAC 57.331 39.130 0.00 0.00 0.00 4.34
1621 1950 6.282167 TGTAAGACCATTTTTGACACTACGA 58.718 36.000 0.00 0.00 0.00 3.43
1622 1951 6.533819 TGTAAGACCATTTTTGACACTACG 57.466 37.500 0.00 0.00 0.00 3.51
1634 1963 3.761752 CCGTCCCAAAATGTAAGACCATT 59.238 43.478 0.00 0.00 36.62 3.16
1636 1965 2.372504 TCCGTCCCAAAATGTAAGACCA 59.627 45.455 0.00 0.00 0.00 4.02
1637 1966 3.007635 CTCCGTCCCAAAATGTAAGACC 58.992 50.000 0.00 0.00 0.00 3.85
1638 1967 3.007635 CCTCCGTCCCAAAATGTAAGAC 58.992 50.000 0.00 0.00 0.00 3.01
1640 1969 2.026636 TCCCTCCGTCCCAAAATGTAAG 60.027 50.000 0.00 0.00 0.00 2.34
1641 1970 1.986631 TCCCTCCGTCCCAAAATGTAA 59.013 47.619 0.00 0.00 0.00 2.41
1642 1971 1.557832 CTCCCTCCGTCCCAAAATGTA 59.442 52.381 0.00 0.00 0.00 2.29
1646 1975 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
1651 2297 2.108970 AGTCAAATACTCCCTCCGTCC 58.891 52.381 0.00 0.00 30.33 4.79
1652 2298 4.996788 TTAGTCAAATACTCCCTCCGTC 57.003 45.455 0.00 0.00 39.80 4.79
1820 3926 5.008217 TGTCCAACAAAATAACAGAAGACCG 59.992 40.000 0.00 0.00 0.00 4.79
1831 3938 4.044065 ACTCATCCCCTGTCCAACAAAATA 59.956 41.667 0.00 0.00 0.00 1.40
1841 3948 2.093447 CACAAGGTACTCATCCCCTGTC 60.093 54.545 0.00 0.00 38.49 3.51
1948 4055 4.154015 CGGCATGTATGAAAAGTGAGTGAA 59.846 41.667 0.00 0.00 0.00 3.18
1954 4061 4.545610 ACAAACGGCATGTATGAAAAGTG 58.454 39.130 0.00 0.00 0.00 3.16
1955 4062 4.277174 TGACAAACGGCATGTATGAAAAGT 59.723 37.500 0.00 0.00 0.00 2.66
2063 4172 1.212751 GAACAATGGCTTCGCACCC 59.787 57.895 0.00 0.00 0.00 4.61
2241 4352 8.253113 CCTTGATAACCTATGAAAGTGCAAAAT 58.747 33.333 0.00 0.00 0.00 1.82
2247 4358 8.408601 CAATTCCCTTGATAACCTATGAAAGTG 58.591 37.037 0.00 0.00 36.97 3.16
2305 4416 4.946160 ATATCTCACCTCTCCTCCTAGG 57.054 50.000 0.82 0.82 38.93 3.02
2340 4451 7.982354 AGGTACTCTGACAGTTTATAAATCTGC 59.018 37.037 19.23 14.79 36.43 4.26
2367 4478 7.545489 TGTCAGAGTGATATGCATAGATCATC 58.455 38.462 13.84 11.97 36.94 2.92
2380 4502 9.278978 GATCATCTAGTTACTGTCAGAGTGATA 57.721 37.037 6.91 0.00 35.96 2.15
2385 4507 6.514870 GCCAGATCATCTAGTTACTGTCAGAG 60.515 46.154 6.91 0.00 0.00 3.35
2391 4513 8.363390 TCAAATAGCCAGATCATCTAGTTACTG 58.637 37.037 0.00 0.00 0.00 2.74
2429 4551 5.934625 GTCAGTTGACTTTGTCCATGTATCT 59.065 40.000 5.04 0.00 41.65 1.98
2595 4718 2.231215 GCATCTCTGCGGTCTGTATT 57.769 50.000 0.00 0.00 38.92 1.89
2699 4822 0.753111 GACATCCCCCTCCACAATGC 60.753 60.000 0.00 0.00 0.00 3.56
2877 5004 4.812626 ACATTTTTCCGACTGTCGTTAACT 59.187 37.500 26.35 10.31 38.40 2.24
3045 5173 6.760440 ATGACCAATTGGAGATATGAGACT 57.240 37.500 31.22 3.28 38.94 3.24
3143 5277 2.372172 ACCACCAGTAATATGGGCTAGC 59.628 50.000 6.04 6.04 45.25 3.42
3305 5439 0.550914 ATATTCGCTGGGGCTCCAAA 59.449 50.000 6.84 0.00 43.51 3.28
3376 5510 6.500400 TGGGCTGGCTGATATTATAAGTTCTA 59.500 38.462 0.00 0.00 0.00 2.10
3512 5772 6.330004 TCTGATTCAAGCTTAACATTGCAA 57.670 33.333 0.00 0.00 0.00 4.08
3533 5793 0.870313 TAGCTCCCAGATCCCCATCT 59.130 55.000 0.00 0.00 40.32 2.90
3571 5831 6.676456 GCTGTACAGAATCCTATGCTTGTTTG 60.676 42.308 27.08 0.00 0.00 2.93
3572 5832 5.355350 GCTGTACAGAATCCTATGCTTGTTT 59.645 40.000 27.08 0.00 0.00 2.83
3592 5852 4.702131 GTGTCAATTATTTCTCTGGGCTGT 59.298 41.667 0.00 0.00 0.00 4.40
3593 5853 4.946157 AGTGTCAATTATTTCTCTGGGCTG 59.054 41.667 0.00 0.00 0.00 4.85
3638 5898 2.355444 TCGTGTCGACTCAGTGTGTAAA 59.645 45.455 17.92 0.00 0.00 2.01
3645 5905 3.644884 AAGAAATCGTGTCGACTCAGT 57.355 42.857 17.92 1.52 39.18 3.41
3646 5906 3.736252 ACAAAGAAATCGTGTCGACTCAG 59.264 43.478 17.92 9.72 39.18 3.35
3647 5907 3.713288 ACAAAGAAATCGTGTCGACTCA 58.287 40.909 17.92 4.79 39.18 3.41
3648 5908 5.345202 ACATACAAAGAAATCGTGTCGACTC 59.655 40.000 17.92 12.56 39.18 3.36
3649 5909 5.227908 ACATACAAAGAAATCGTGTCGACT 58.772 37.500 17.92 0.00 39.18 4.18
3650 5910 5.511088 ACATACAAAGAAATCGTGTCGAC 57.489 39.130 9.11 9.11 39.18 4.20
3651 5911 6.359545 CAAACATACAAAGAAATCGTGTCGA 58.640 36.000 0.00 0.00 41.13 4.20
3652 5912 5.058008 GCAAACATACAAAGAAATCGTGTCG 59.942 40.000 0.00 0.00 0.00 4.35
3653 5913 6.142817 AGCAAACATACAAAGAAATCGTGTC 58.857 36.000 0.00 0.00 0.00 3.67
3654 5914 6.072112 AGCAAACATACAAAGAAATCGTGT 57.928 33.333 0.00 0.00 0.00 4.49
3655 5915 6.614162 GCAAGCAAACATACAAAGAAATCGTG 60.614 38.462 0.00 0.00 0.00 4.35
3656 5916 5.402270 GCAAGCAAACATACAAAGAAATCGT 59.598 36.000 0.00 0.00 0.00 3.73
3657 5917 5.401972 TGCAAGCAAACATACAAAGAAATCG 59.598 36.000 0.00 0.00 0.00 3.34
3658 5918 6.768029 TGCAAGCAAACATACAAAGAAATC 57.232 33.333 0.00 0.00 0.00 2.17
3659 5919 6.369615 GGATGCAAGCAAACATACAAAGAAAT 59.630 34.615 0.00 0.00 0.00 2.17
3660 5920 5.695816 GGATGCAAGCAAACATACAAAGAAA 59.304 36.000 0.00 0.00 0.00 2.52
3661 5921 5.221402 TGGATGCAAGCAAACATACAAAGAA 60.221 36.000 0.00 0.00 34.17 2.52
3662 5922 4.280425 TGGATGCAAGCAAACATACAAAGA 59.720 37.500 0.00 0.00 34.17 2.52
3663 5923 4.558178 TGGATGCAAGCAAACATACAAAG 58.442 39.130 0.00 0.00 34.17 2.77
3664 5924 4.597404 TGGATGCAAGCAAACATACAAA 57.403 36.364 0.00 0.00 34.17 2.83
3665 5925 4.381825 GGATGGATGCAAGCAAACATACAA 60.382 41.667 15.40 0.00 40.43 2.41
3666 5926 3.130869 GGATGGATGCAAGCAAACATACA 59.869 43.478 15.40 0.88 41.26 2.29
3667 5927 3.130869 TGGATGGATGCAAGCAAACATAC 59.869 43.478 14.12 14.12 31.70 2.39
3668 5928 3.363627 TGGATGGATGCAAGCAAACATA 58.636 40.909 12.67 0.00 0.00 2.29
3669 5929 2.167693 CTGGATGGATGCAAGCAAACAT 59.832 45.455 12.58 12.58 0.00 2.71
3670 5930 1.546923 CTGGATGGATGCAAGCAAACA 59.453 47.619 0.00 1.53 0.00 2.83
3671 5931 1.547372 ACTGGATGGATGCAAGCAAAC 59.453 47.619 0.00 0.00 0.00 2.93
3672 5932 1.927487 ACTGGATGGATGCAAGCAAA 58.073 45.000 0.00 0.00 0.00 3.68
3673 5933 1.927487 AACTGGATGGATGCAAGCAA 58.073 45.000 0.00 0.00 0.00 3.91
3674 5934 1.927487 AAACTGGATGGATGCAAGCA 58.073 45.000 0.00 0.00 0.00 3.91
3675 5935 3.323751 AAAAACTGGATGGATGCAAGC 57.676 42.857 0.00 0.00 0.00 4.01
3676 5936 4.866486 GCTTAAAAACTGGATGGATGCAAG 59.134 41.667 0.00 0.00 0.00 4.01
3677 5937 4.282957 TGCTTAAAAACTGGATGGATGCAA 59.717 37.500 0.00 0.00 0.00 4.08
3678 5938 3.831333 TGCTTAAAAACTGGATGGATGCA 59.169 39.130 0.00 0.00 0.00 3.96
3679 5939 4.454728 TGCTTAAAAACTGGATGGATGC 57.545 40.909 0.00 0.00 0.00 3.91
3680 5940 6.311935 CACATTGCTTAAAAACTGGATGGATG 59.688 38.462 0.00 0.00 0.00 3.51
3681 5941 6.400568 CACATTGCTTAAAAACTGGATGGAT 58.599 36.000 0.00 0.00 0.00 3.41
3682 5942 5.782047 CACATTGCTTAAAAACTGGATGGA 58.218 37.500 0.00 0.00 0.00 3.41
3683 5943 4.389687 GCACATTGCTTAAAAACTGGATGG 59.610 41.667 0.00 0.00 40.96 3.51
3684 5944 5.520022 GCACATTGCTTAAAAACTGGATG 57.480 39.130 0.00 0.00 40.96 3.51
3701 5961 3.618507 GCTAAGGAGACAGACAAGCACAT 60.619 47.826 0.00 0.00 0.00 3.21
3702 5962 2.289072 GCTAAGGAGACAGACAAGCACA 60.289 50.000 0.00 0.00 0.00 4.57
3708 5968 4.689612 ACAAAAGCTAAGGAGACAGACA 57.310 40.909 0.00 0.00 0.00 3.41
3709 5969 6.378710 AAAACAAAAGCTAAGGAGACAGAC 57.621 37.500 0.00 0.00 0.00 3.51
3717 5977 6.564328 AGTGTCAGAAAAACAAAAGCTAAGG 58.436 36.000 0.00 0.00 0.00 2.69
3720 5980 6.919721 ACAAGTGTCAGAAAAACAAAAGCTA 58.080 32.000 0.00 0.00 0.00 3.32
3721 5981 5.783111 ACAAGTGTCAGAAAAACAAAAGCT 58.217 33.333 0.00 0.00 0.00 3.74
3722 5982 6.253512 CCTACAAGTGTCAGAAAAACAAAAGC 59.746 38.462 0.00 0.00 0.00 3.51
3723 5983 7.312899 ACCTACAAGTGTCAGAAAAACAAAAG 58.687 34.615 0.00 0.00 0.00 2.27
3728 6027 4.025145 CCGACCTACAAGTGTCAGAAAAAC 60.025 45.833 0.00 0.00 0.00 2.43
3735 6034 0.753867 TTGCCGACCTACAAGTGTCA 59.246 50.000 0.00 0.00 0.00 3.58
3749 6048 1.069296 TCTGCGTCTTCAATTTTGCCG 60.069 47.619 0.00 0.00 0.00 5.69
3767 6066 0.038251 TGAACGTTCGCAGCATCTCT 60.038 50.000 22.48 0.00 0.00 3.10
3913 6212 6.556212 TGAAGAAGTTTGAATGTTTGCGTAA 58.444 32.000 0.00 0.00 0.00 3.18
3917 6216 6.972328 TGTACTGAAGAAGTTTGAATGTTTGC 59.028 34.615 0.00 0.00 40.56 3.68
3951 6250 8.629986 CATTAGAAGTTTGAATGTTTGCGTAAG 58.370 33.333 3.60 0.00 43.44 2.34
3952 6251 7.593273 CCATTAGAAGTTTGAATGTTTGCGTAA 59.407 33.333 8.87 0.00 0.00 3.18
3953 6252 7.081349 CCATTAGAAGTTTGAATGTTTGCGTA 58.919 34.615 8.87 0.00 0.00 4.42
3954 6253 5.920273 CCATTAGAAGTTTGAATGTTTGCGT 59.080 36.000 8.87 0.00 0.00 5.24
3955 6254 5.345741 CCCATTAGAAGTTTGAATGTTTGCG 59.654 40.000 8.87 0.00 0.00 4.85
3956 6255 6.146021 CACCCATTAGAAGTTTGAATGTTTGC 59.854 38.462 8.87 0.00 0.00 3.68
3957 6256 7.432869 TCACCCATTAGAAGTTTGAATGTTTG 58.567 34.615 8.87 6.34 0.00 2.93
3958 6257 7.505585 TCTCACCCATTAGAAGTTTGAATGTTT 59.494 33.333 8.87 0.00 0.00 2.83
3959 6258 7.004086 TCTCACCCATTAGAAGTTTGAATGTT 58.996 34.615 8.87 0.00 0.00 2.71
3960 6259 6.542821 TCTCACCCATTAGAAGTTTGAATGT 58.457 36.000 8.87 0.00 0.00 2.71
3961 6260 7.452880 TTCTCACCCATTAGAAGTTTGAATG 57.547 36.000 4.47 4.47 0.00 2.67
3962 6261 8.526147 CAATTCTCACCCATTAGAAGTTTGAAT 58.474 33.333 0.00 0.00 35.32 2.57
3963 6262 7.505585 ACAATTCTCACCCATTAGAAGTTTGAA 59.494 33.333 0.00 0.00 35.32 2.69
3964 6263 7.004086 ACAATTCTCACCCATTAGAAGTTTGA 58.996 34.615 0.00 0.00 35.32 2.69
3965 6264 7.219484 ACAATTCTCACCCATTAGAAGTTTG 57.781 36.000 0.00 0.00 35.32 2.93
3979 6278 4.439289 GCCCATCAGCTAAACAATTCTCAC 60.439 45.833 0.00 0.00 0.00 3.51
4001 6300 3.642705 CAGAAAAACTGGGCTACTTTGC 58.357 45.455 0.00 0.00 42.39 3.68
4013 6312 5.872963 AGATTACGGGGTTACAGAAAAACT 58.127 37.500 0.00 0.00 0.00 2.66
4045 6352 5.938125 ACTACTTTTACTCCCGACGTACTTA 59.062 40.000 0.00 0.00 0.00 2.24
4051 6358 5.999483 GTAAACTACTTTTACTCCCGACG 57.001 43.478 0.60 0.00 44.37 5.12
4117 6437 0.317020 GTTTGCAGCGAGTTGTCACC 60.317 55.000 0.00 0.00 0.00 4.02
4149 6469 2.674852 CCGTGAAGTGATGTTCAGGATG 59.325 50.000 7.65 0.00 42.40 3.51
4169 6489 1.747355 CTGGAGGCATTCACATCAACC 59.253 52.381 0.00 0.00 0.00 3.77
4187 6507 5.428496 TCTCAAGAAAATTCAGCACACTG 57.572 39.130 0.00 0.00 45.95 3.66
4232 6552 1.076485 ATGGATGAACAGGCCAGGC 60.076 57.895 5.01 1.26 34.74 4.85
4282 6603 4.387862 GCAAGCCTCAATGTTTCATTTCAG 59.612 41.667 0.00 0.00 0.00 3.02
4291 6612 2.818432 CAGAGAAGCAAGCCTCAATGTT 59.182 45.455 0.00 0.00 32.07 2.71
4298 6619 0.605860 CAGCACAGAGAAGCAAGCCT 60.606 55.000 0.00 0.00 0.00 4.58
4305 6626 3.523547 CTCCTCATTCAGCACAGAGAAG 58.476 50.000 0.00 0.00 0.00 2.85
4310 6631 3.545724 TGCTCCTCATTCAGCACAG 57.454 52.632 0.00 0.00 40.80 3.66
4316 6641 7.415989 GCAAAATTTCTAGATGCTCCTCATTCA 60.416 37.037 7.82 0.00 35.05 2.57
4325 6650 3.956848 GGAGGGCAAAATTTCTAGATGCT 59.043 43.478 13.47 0.00 37.20 3.79
4337 6669 0.251608 GGTAAGCTGGGAGGGCAAAA 60.252 55.000 0.00 0.00 0.00 2.44
4375 6711 1.612950 AGCAATGCATGACCACGAAAA 59.387 42.857 8.35 0.00 0.00 2.29
4376 6712 1.246649 AGCAATGCATGACCACGAAA 58.753 45.000 8.35 0.00 0.00 3.46
4377 6713 1.737236 GTAGCAATGCATGACCACGAA 59.263 47.619 8.35 0.00 0.00 3.85
4378 6714 1.338579 TGTAGCAATGCATGACCACGA 60.339 47.619 8.35 0.00 0.00 4.35
4379 6715 1.063027 CTGTAGCAATGCATGACCACG 59.937 52.381 8.35 0.00 0.00 4.94
4380 6716 2.353889 CTCTGTAGCAATGCATGACCAC 59.646 50.000 8.35 0.00 0.00 4.16
4382 6718 2.636830 ACTCTGTAGCAATGCATGACC 58.363 47.619 8.35 0.00 0.00 4.02
4383 6719 4.631377 TGTAACTCTGTAGCAATGCATGAC 59.369 41.667 8.35 2.89 0.00 3.06
4384 6720 4.631377 GTGTAACTCTGTAGCAATGCATGA 59.369 41.667 8.35 0.00 0.00 3.07
4395 6735 4.655027 CGTAGCAATCGTGTAACTCTGTA 58.345 43.478 0.00 0.00 31.75 2.74
4396 6736 3.499048 CGTAGCAATCGTGTAACTCTGT 58.501 45.455 0.00 0.00 31.75 3.41
4425 6765 9.000486 TCGACGACATCATACTCTTATCTTTAT 58.000 33.333 0.00 0.00 0.00 1.40
4426 6766 8.374327 TCGACGACATCATACTCTTATCTTTA 57.626 34.615 0.00 0.00 0.00 1.85
4429 6769 5.410132 CCTCGACGACATCATACTCTTATCT 59.590 44.000 0.00 0.00 0.00 1.98
4430 6770 5.408909 TCCTCGACGACATCATACTCTTATC 59.591 44.000 0.00 0.00 0.00 1.75
4432 6772 4.700700 TCCTCGACGACATCATACTCTTA 58.299 43.478 0.00 0.00 0.00 2.10
4463 6819 8.567285 ACGGAGAAGAAATCATTCAAATAACT 57.433 30.769 0.00 0.00 38.06 2.24
4470 6826 7.121168 AGCAAAATACGGAGAAGAAATCATTCA 59.879 33.333 0.00 0.00 38.06 2.57
4474 6830 6.611381 CAAGCAAAATACGGAGAAGAAATCA 58.389 36.000 0.00 0.00 0.00 2.57
4476 6832 5.048083 TGCAAGCAAAATACGGAGAAGAAAT 60.048 36.000 0.00 0.00 0.00 2.17
4480 6836 3.829886 TGCAAGCAAAATACGGAGAAG 57.170 42.857 0.00 0.00 0.00 2.85
4481 6837 3.128589 GGATGCAAGCAAAATACGGAGAA 59.871 43.478 0.00 0.00 0.00 2.87
4483 6839 2.423185 TGGATGCAAGCAAAATACGGAG 59.577 45.455 0.00 0.00 0.00 4.63
4485 6841 2.937469 TGGATGCAAGCAAAATACGG 57.063 45.000 0.00 0.00 0.00 4.02
4487 6843 5.772825 TCCTATGGATGCAAGCAAAATAC 57.227 39.130 0.00 0.00 0.00 1.89
4488 6844 5.655974 TGTTCCTATGGATGCAAGCAAAATA 59.344 36.000 0.00 0.00 0.00 1.40
4489 6845 4.467082 TGTTCCTATGGATGCAAGCAAAAT 59.533 37.500 0.00 0.00 0.00 1.82
4490 6846 3.831333 TGTTCCTATGGATGCAAGCAAAA 59.169 39.130 0.00 0.00 0.00 2.44
4492 6848 3.084536 TGTTCCTATGGATGCAAGCAA 57.915 42.857 0.00 0.00 0.00 3.91
4494 6850 4.454728 TTTTGTTCCTATGGATGCAAGC 57.545 40.909 0.00 0.00 32.05 4.01
4507 6877 8.644619 GCCTTCGTTTCTTATTAATTTTGTTCC 58.355 33.333 0.00 0.00 0.00 3.62
4511 6881 7.749126 AGTCGCCTTCGTTTCTTATTAATTTTG 59.251 33.333 0.00 0.00 36.96 2.44
4517 6887 5.390145 GCAAAGTCGCCTTCGTTTCTTATTA 60.390 40.000 0.00 0.00 36.96 0.98
4524 6894 0.951558 ATGCAAAGTCGCCTTCGTTT 59.048 45.000 0.00 0.00 36.96 3.60
4530 6900 0.036732 TCCTTCATGCAAAGTCGCCT 59.963 50.000 0.00 0.00 0.00 5.52
4533 6903 4.222114 GTTTTCTCCTTCATGCAAAGTCG 58.778 43.478 0.00 0.00 0.00 4.18
4536 6906 5.443185 TCTGTTTTCTCCTTCATGCAAAG 57.557 39.130 0.00 0.00 0.00 2.77
4537 6907 5.850557 TTCTGTTTTCTCCTTCATGCAAA 57.149 34.783 0.00 0.00 0.00 3.68
4538 6908 5.126869 TGTTTCTGTTTTCTCCTTCATGCAA 59.873 36.000 0.00 0.00 0.00 4.08
4539 6909 4.644234 TGTTTCTGTTTTCTCCTTCATGCA 59.356 37.500 0.00 0.00 0.00 3.96
4540 6910 5.186996 TGTTTCTGTTTTCTCCTTCATGC 57.813 39.130 0.00 0.00 0.00 4.06
4541 6911 9.350357 CATAATGTTTCTGTTTTCTCCTTCATG 57.650 33.333 0.00 0.00 0.00 3.07
4542 6912 9.300681 TCATAATGTTTCTGTTTTCTCCTTCAT 57.699 29.630 0.00 0.00 0.00 2.57
4543 6913 8.690203 TCATAATGTTTCTGTTTTCTCCTTCA 57.310 30.769 0.00 0.00 0.00 3.02
4544 6914 9.399403 GTTCATAATGTTTCTGTTTTCTCCTTC 57.601 33.333 0.00 0.00 0.00 3.46
4545 6915 8.912988 TGTTCATAATGTTTCTGTTTTCTCCTT 58.087 29.630 0.00 0.00 0.00 3.36
4547 6917 7.809806 CCTGTTCATAATGTTTCTGTTTTCTCC 59.190 37.037 0.00 0.00 0.00 3.71
4578 6961 4.796231 CTTCGACCACCTCGCCGG 62.796 72.222 0.00 0.00 42.62 6.13
4585 6968 3.712881 GCGTGTGCTTCGACCACC 61.713 66.667 11.60 4.25 38.39 4.61
4587 6970 3.529341 ATGGCGTGTGCTTCGACCA 62.529 57.895 0.00 11.27 42.25 4.02
4592 6975 1.334419 GCATATCATGGCGTGTGCTTC 60.334 52.381 12.12 0.00 42.25 3.86
4607 6990 1.999735 CTGTTCACGTCGTTGGCATAT 59.000 47.619 0.00 0.00 0.00 1.78
4608 6991 1.424403 CTGTTCACGTCGTTGGCATA 58.576 50.000 0.00 0.00 0.00 3.14
4611 6994 0.949105 ATCCTGTTCACGTCGTTGGC 60.949 55.000 0.00 0.00 0.00 4.52
4613 6996 1.455786 GACATCCTGTTCACGTCGTTG 59.544 52.381 0.00 0.00 0.00 4.10
4614 6997 1.779569 GACATCCTGTTCACGTCGTT 58.220 50.000 0.00 0.00 0.00 3.85
4615 6998 0.386858 CGACATCCTGTTCACGTCGT 60.387 55.000 0.00 0.00 43.26 4.34
4616 6999 2.349843 CGACATCCTGTTCACGTCG 58.650 57.895 0.00 0.00 42.79 5.12
4617 7000 1.352156 GGCGACATCCTGTTCACGTC 61.352 60.000 0.00 0.00 0.00 4.34
4618 7001 1.374252 GGCGACATCCTGTTCACGT 60.374 57.895 0.00 0.00 0.00 4.49
4619 7002 2.444624 CGGCGACATCCTGTTCACG 61.445 63.158 0.00 0.00 0.00 4.35
4620 7003 2.740714 GCGGCGACATCCTGTTCAC 61.741 63.158 12.98 0.00 0.00 3.18
4621 7004 2.434185 GCGGCGACATCCTGTTCA 60.434 61.111 12.98 0.00 0.00 3.18
4622 7005 2.434185 TGCGGCGACATCCTGTTC 60.434 61.111 12.98 0.00 0.00 3.18
4623 7006 2.434884 CTGCGGCGACATCCTGTT 60.435 61.111 12.98 0.00 0.00 3.16
4626 7009 4.166888 ATGCTGCGGCGACATCCT 62.167 61.111 12.98 0.00 42.25 3.24
4628 7011 3.160557 GACATGCTGCGGCGACATC 62.161 63.158 12.98 4.55 42.25 3.06
4629 7012 3.197790 GACATGCTGCGGCGACAT 61.198 61.111 12.98 7.98 42.25 3.06
4630 7013 4.678499 TGACATGCTGCGGCGACA 62.678 61.111 12.98 7.54 42.25 4.35
4633 7016 2.879070 GATCTGACATGCTGCGGCG 61.879 63.158 13.96 0.51 42.25 6.46
4634 7017 2.879070 CGATCTGACATGCTGCGGC 61.879 63.158 11.65 11.65 39.26 6.53
4635 7018 2.242572 CCGATCTGACATGCTGCGG 61.243 63.158 0.00 0.00 0.00 5.69
4636 7019 2.879070 GCCGATCTGACATGCTGCG 61.879 63.158 0.00 0.00 0.00 5.18
4638 7021 1.485838 GACGCCGATCTGACATGCTG 61.486 60.000 0.00 0.00 0.00 4.41
4639 7022 1.227089 GACGCCGATCTGACATGCT 60.227 57.895 0.00 0.00 0.00 3.79
4641 7024 1.946156 CCGACGCCGATCTGACATG 60.946 63.158 0.00 0.00 38.22 3.21
4642 7025 2.337749 GACCGACGCCGATCTGACAT 62.338 60.000 0.00 0.00 38.22 3.06
4643 7026 3.047718 GACCGACGCCGATCTGACA 62.048 63.158 0.00 0.00 38.22 3.58
4644 7027 2.278013 GACCGACGCCGATCTGAC 60.278 66.667 0.00 0.00 38.22 3.51
4645 7028 3.872728 CGACCGACGCCGATCTGA 61.873 66.667 0.00 0.00 38.22 3.27
4646 7029 4.907034 CCGACCGACGCCGATCTG 62.907 72.222 9.01 0.00 41.07 2.90
4697 7082 2.514824 GCTGGATCAAGGACCGCC 60.515 66.667 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.