Multiple sequence alignment - TraesCS5D01G507900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G507900 chr5D 100.000 2603 0 0 1 2603 533115500 533112898 0.000000e+00 4807
1 TraesCS5D01G507900 chr4A 87.564 2139 151 44 1 2079 639024336 639026419 0.000000e+00 2370
2 TraesCS5D01G507900 chr4A 90.909 99 9 0 2065 2163 639032944 639033042 1.630000e-27 134
3 TraesCS5D01G507900 chr4A 94.444 72 4 0 2211 2282 625645240 625645311 7.610000e-21 111
4 TraesCS5D01G507900 chr5B 93.666 1042 48 6 857 1887 673045305 673044271 0.000000e+00 1543
5 TraesCS5D01G507900 chr5B 80.442 634 64 29 1 610 673046551 673045954 1.850000e-116 429
6 TraesCS5D01G507900 chr5B 83.234 334 42 11 2214 2540 252332838 252333164 7.040000e-76 294
7 TraesCS5D01G507900 chr5B 91.429 210 14 3 604 811 673045740 673045533 4.240000e-73 285
8 TraesCS5D01G507900 chr6A 87.202 336 36 3 2210 2540 22038991 22038658 2.450000e-100 375
9 TraesCS5D01G507900 chr6A 81.739 345 45 8 2201 2540 77504172 77504503 3.300000e-69 272
10 TraesCS5D01G507900 chr7A 85.965 342 37 8 2206 2540 80325618 80325955 3.190000e-94 355
11 TraesCS5D01G507900 chr7A 82.011 189 29 4 264 448 458712907 458712720 3.470000e-34 156
12 TraesCS5D01G507900 chr6D 86.053 337 35 8 2211 2540 143396297 143395966 4.120000e-93 351
13 TraesCS5D01G507900 chr6B 85.047 321 43 4 2222 2540 715297432 715297749 3.230000e-84 322
14 TraesCS5D01G507900 chr6B 84.118 170 21 4 276 442 537468248 537468082 2.680000e-35 159
15 TraesCS5D01G507900 chr5A 86.220 254 28 4 2293 2540 456478164 456477912 4.270000e-68 268
16 TraesCS5D01G507900 chr5A 83.851 161 20 5 292 448 618642613 618642771 5.800000e-32 148
17 TraesCS5D01G507900 chr5A 91.919 99 6 2 2211 2307 231064125 231064223 1.260000e-28 137
18 TraesCS5D01G507900 chr2B 84.387 269 30 9 2280 2540 737622238 737621974 1.200000e-63 254
19 TraesCS5D01G507900 chr7B 86.344 227 24 5 2211 2432 718078878 718078654 9.310000e-60 241
20 TraesCS5D01G507900 chr2A 88.462 156 14 3 2386 2540 738029330 738029178 4.420000e-43 185
21 TraesCS5D01G507900 chr2A 80.513 195 31 7 268 458 513261487 513261678 2.700000e-30 143
22 TraesCS5D01G507900 chr4D 81.773 203 30 6 261 461 4243309 4243112 2.070000e-36 163
23 TraesCS5D01G507900 chr2D 82.051 195 32 2 264 456 101690838 101690645 2.070000e-36 163
24 TraesCS5D01G507900 chr3D 80.829 193 31 4 268 456 565565483 565565673 2.090000e-31 147
25 TraesCS5D01G507900 chr3D 80.526 190 35 1 269 456 37995360 37995171 7.510000e-31 145
26 TraesCS5D01G507900 chr3A 89.286 84 9 0 2211 2294 611172315 611172398 3.540000e-19 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G507900 chr5D 533112898 533115500 2602 True 4807.000000 4807 100.000000 1 2603 1 chr5D.!!$R1 2602
1 TraesCS5D01G507900 chr4A 639024336 639026419 2083 False 2370.000000 2370 87.564000 1 2079 1 chr4A.!!$F2 2078
2 TraesCS5D01G507900 chr5B 673044271 673046551 2280 True 752.333333 1543 88.512333 1 1887 3 chr5B.!!$R1 1886

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
518 551 0.25361 TTGTGAGTTGGTTCCACCGT 59.746 50.0 0.0 0.0 42.58 4.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2185 2641 0.179034 ATGAAATGCCGAGGAGCTCC 60.179 55.0 26.22 26.22 0.0 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.871772 CTGGGTGCAGCTCGAAAAG 59.128 57.895 16.65 0.89 0.00 2.27
37 38 2.346803 GGTGCAGCTCGAAAAGTATGA 58.653 47.619 9.07 0.00 0.00 2.15
73 74 4.810491 ACTCGCTTTCGTAGGTTGTTTTAA 59.190 37.500 0.00 0.00 36.96 1.52
79 80 8.782327 CGCTTTCGTAGGTTGTTTTAATATTTC 58.218 33.333 0.00 0.00 0.00 2.17
197 205 7.823745 ATCCAATGGTATTTAATCTGGTGTC 57.176 36.000 0.00 0.00 0.00 3.67
214 222 4.142049 TGGTGTCATATAACTCGCATGTCA 60.142 41.667 0.00 0.00 0.00 3.58
216 224 5.466728 GGTGTCATATAACTCGCATGTCATT 59.533 40.000 0.00 0.00 0.00 2.57
262 271 3.995048 ACTTGCGCTCTTAACTAGGTTTC 59.005 43.478 9.73 0.00 0.00 2.78
263 272 3.955650 TGCGCTCTTAACTAGGTTTCT 57.044 42.857 9.73 0.00 0.00 2.52
266 275 5.786311 TGCGCTCTTAACTAGGTTTCTTTA 58.214 37.500 9.73 0.00 0.00 1.85
283 292 9.575783 GGTTTCTTTATTTTCAACACAGTACAA 57.424 29.630 0.00 0.00 0.00 2.41
303 312 3.371102 AACGCAGACGCTCATACATAT 57.629 42.857 0.00 0.00 45.53 1.78
313 322 5.296748 ACGCTCATACATATGCACATACAA 58.703 37.500 1.58 0.00 33.76 2.41
318 327 8.456471 GCTCATACATATGCACATACAATCATT 58.544 33.333 1.58 0.00 33.76 2.57
332 341 5.878332 ACAATCATTCTTATGAACGCACA 57.122 34.783 0.00 0.00 43.67 4.57
340 349 0.394938 TATGAACGCACACACACCCT 59.605 50.000 0.00 0.00 0.00 4.34
344 353 0.685097 AACGCACACACACCCTCTAT 59.315 50.000 0.00 0.00 0.00 1.98
352 364 3.309296 CACACACCCTCTATCCCTATGT 58.691 50.000 0.00 0.00 0.00 2.29
359 371 2.975489 CCTCTATCCCTATGTGCACCTT 59.025 50.000 15.69 4.36 0.00 3.50
363 375 1.271856 TCCCTATGTGCACCTTCGAA 58.728 50.000 15.69 0.00 0.00 3.71
404 416 2.724977 TTGAGATTGACGAACTCGCT 57.275 45.000 0.00 0.00 44.43 4.93
423 435 2.475852 GCTACAGACACCTTCGTAGTCG 60.476 54.545 0.00 0.00 37.36 4.18
424 436 0.879765 ACAGACACCTTCGTAGTCGG 59.120 55.000 0.00 0.00 37.36 4.79
445 457 3.277962 GGAACGTCTCCTCCCACTA 57.722 57.895 8.87 0.00 41.61 2.74
450 462 0.886563 CGTCTCCTCCCACTAAACGT 59.113 55.000 0.00 0.00 0.00 3.99
479 512 2.619590 GGGGAAATACGACCACCAATGT 60.620 50.000 0.00 0.00 0.00 2.71
488 521 2.993899 CGACCACCAATGTCAAGTCTAC 59.006 50.000 0.00 0.00 32.91 2.59
504 537 3.635373 AGTCTACGACTTGAACCTTGTGA 59.365 43.478 0.00 0.00 40.28 3.58
518 551 0.253610 TTGTGAGTTGGTTCCACCGT 59.746 50.000 0.00 0.00 42.58 4.83
636 889 5.113502 GCAAGTTGCAATCTTCACTAAGT 57.886 39.130 22.90 0.00 44.26 2.24
652 905 7.202016 TCACTAAGTTGAAGCTATGGTTTTG 57.798 36.000 0.00 0.00 0.00 2.44
706 959 6.459923 CACTTAGACATAGATAGGCCCTTTC 58.540 44.000 0.00 0.00 0.00 2.62
713 966 7.841222 AGACATAGATAGGCCCTTTCAAATTTT 59.159 33.333 0.00 0.00 0.00 1.82
714 967 7.785033 ACATAGATAGGCCCTTTCAAATTTTG 58.215 34.615 0.00 2.59 0.00 2.44
715 968 7.619302 ACATAGATAGGCCCTTTCAAATTTTGA 59.381 33.333 7.74 7.74 38.04 2.69
717 970 3.769739 AGGCCCTTTCAAATTTTGACC 57.230 42.857 11.30 9.04 39.87 4.02
718 971 3.044894 AGGCCCTTTCAAATTTTGACCA 58.955 40.909 11.30 1.30 39.87 4.02
719 972 3.138304 GGCCCTTTCAAATTTTGACCAC 58.862 45.455 11.30 0.88 39.87 4.16
720 973 3.181455 GGCCCTTTCAAATTTTGACCACT 60.181 43.478 11.30 0.00 39.87 4.00
778 1032 9.772973 ACATGCAGAAATAATATGATTGCATTT 57.227 25.926 7.67 1.01 45.42 2.32
868 1307 3.558109 GCTCTCCTTGAAACTTAGCCACT 60.558 47.826 0.00 0.00 0.00 4.00
920 1359 4.107051 GAGCGGGCACATGCACAC 62.107 66.667 6.95 0.00 46.93 3.82
921 1360 4.953010 AGCGGGCACATGCACACA 62.953 61.111 6.95 0.00 46.93 3.72
925 1364 1.304509 CGGGCACATGCACACATACA 61.305 55.000 6.95 0.00 46.93 2.29
1074 1519 3.847602 CTCCTCTCCAGCGCCCTG 61.848 72.222 2.29 0.00 38.85 4.45
1075 1520 4.704103 TCCTCTCCAGCGCCCTGT 62.704 66.667 2.29 0.00 37.38 4.00
1153 1598 2.818169 TTCTGCGTGGCCTTCCTGT 61.818 57.895 3.32 0.00 0.00 4.00
1281 1726 2.862541 CTGAACCTGGTCACCATCAAA 58.137 47.619 0.00 0.00 30.82 2.69
1631 2076 5.563475 GCCGCGAGAAATAGTACTAATACCA 60.563 44.000 8.23 0.00 30.88 3.25
1719 2175 4.222124 ACCAGGTTTTCTATGGTAGCTG 57.778 45.455 0.00 0.00 45.44 4.24
1755 2211 7.117241 TGATCAGTGCTTCTTTTAGTTTACG 57.883 36.000 0.00 0.00 0.00 3.18
1816 2272 1.202557 ACATTGTTTGGTGCTTGCCAG 60.203 47.619 0.00 0.00 40.01 4.85
1819 2275 0.459489 TGTTTGGTGCTTGCCAGTTC 59.541 50.000 0.00 0.00 40.01 3.01
1830 2286 3.734902 GCTTGCCAGTTCGGGATATTTTG 60.735 47.826 0.00 0.00 33.48 2.44
1912 2368 4.519540 TGAGCAGAAAATAAAACCAGCC 57.480 40.909 0.00 0.00 0.00 4.85
1935 2391 6.974622 GCCGAAAATATCAAAGAACACATGAT 59.025 34.615 0.00 0.00 37.54 2.45
2037 2493 6.127730 CCTTCCAAAGTCAAAACTTGTAGTGT 60.128 38.462 0.00 0.00 45.07 3.55
2038 2494 7.066525 CCTTCCAAAGTCAAAACTTGTAGTGTA 59.933 37.037 0.00 0.00 45.07 2.90
2039 2495 7.311364 TCCAAAGTCAAAACTTGTAGTGTAC 57.689 36.000 0.00 0.00 45.07 2.90
2040 2496 6.036300 TCCAAAGTCAAAACTTGTAGTGTACG 59.964 38.462 0.00 0.00 45.07 3.67
2041 2497 6.036300 CCAAAGTCAAAACTTGTAGTGTACGA 59.964 38.462 0.00 0.00 45.07 3.43
2042 2498 6.823678 AAGTCAAAACTTGTAGTGTACGAG 57.176 37.500 0.00 0.51 44.13 4.18
2079 2535 2.189342 GTAGCAGATGAGTTCACGCTC 58.811 52.381 5.98 0.00 36.87 5.03
2080 2536 0.108424 AGCAGATGAGTTCACGCTCC 60.108 55.000 0.00 0.00 31.73 4.70
2081 2537 0.390340 GCAGATGAGTTCACGCTCCA 60.390 55.000 0.00 0.00 34.74 3.86
2082 2538 1.941209 GCAGATGAGTTCACGCTCCAA 60.941 52.381 0.00 0.00 34.74 3.53
2083 2539 2.416747 CAGATGAGTTCACGCTCCAAA 58.583 47.619 0.00 0.00 34.74 3.28
2084 2540 3.005554 CAGATGAGTTCACGCTCCAAAT 58.994 45.455 0.00 0.00 34.74 2.32
2085 2541 4.183865 CAGATGAGTTCACGCTCCAAATA 58.816 43.478 0.00 0.00 34.74 1.40
2086 2542 4.631377 CAGATGAGTTCACGCTCCAAATAA 59.369 41.667 0.00 0.00 34.74 1.40
2087 2543 4.631813 AGATGAGTTCACGCTCCAAATAAC 59.368 41.667 0.00 0.00 34.74 1.89
2088 2544 3.734463 TGAGTTCACGCTCCAAATAACA 58.266 40.909 0.00 0.00 34.74 2.41
2089 2545 4.323417 TGAGTTCACGCTCCAAATAACAT 58.677 39.130 0.00 0.00 34.74 2.71
2090 2546 4.154015 TGAGTTCACGCTCCAAATAACATG 59.846 41.667 0.00 0.00 34.74 3.21
2091 2547 4.323417 AGTTCACGCTCCAAATAACATGA 58.677 39.130 0.00 0.00 0.00 3.07
2092 2548 4.154195 AGTTCACGCTCCAAATAACATGAC 59.846 41.667 0.00 0.00 0.00 3.06
2093 2549 3.669536 TCACGCTCCAAATAACATGACA 58.330 40.909 0.00 0.00 0.00 3.58
2094 2550 4.260985 TCACGCTCCAAATAACATGACAT 58.739 39.130 0.00 0.00 0.00 3.06
2095 2551 4.699735 TCACGCTCCAAATAACATGACATT 59.300 37.500 0.00 0.00 0.00 2.71
2096 2552 5.182950 TCACGCTCCAAATAACATGACATTT 59.817 36.000 0.00 1.48 0.00 2.32
2097 2553 5.286797 CACGCTCCAAATAACATGACATTTG 59.713 40.000 20.41 20.41 40.33 2.32
2098 2554 5.048083 ACGCTCCAAATAACATGACATTTGT 60.048 36.000 23.03 10.74 39.45 2.83
2099 2555 5.286797 CGCTCCAAATAACATGACATTTGTG 59.713 40.000 23.03 18.59 39.45 3.33
2100 2556 6.158598 GCTCCAAATAACATGACATTTGTGT 58.841 36.000 23.03 0.00 39.45 3.72
2101 2557 6.308766 GCTCCAAATAACATGACATTTGTGTC 59.691 38.462 23.03 1.76 39.45 3.67
2112 2568 5.404096 TGACATTTGTGTCATCAATCATGC 58.596 37.500 7.13 0.00 43.09 4.06
2113 2569 4.417506 ACATTTGTGTCATCAATCATGCG 58.582 39.130 0.00 0.00 31.70 4.73
2114 2570 4.156373 ACATTTGTGTCATCAATCATGCGA 59.844 37.500 0.00 0.00 31.70 5.10
2115 2571 4.968812 TTTGTGTCATCAATCATGCGAT 57.031 36.364 0.00 0.00 31.70 4.58
2116 2572 6.038492 ACATTTGTGTCATCAATCATGCGATA 59.962 34.615 0.00 0.00 31.70 2.92
2117 2573 5.662211 TTGTGTCATCAATCATGCGATAG 57.338 39.130 0.00 0.00 31.70 2.08
2118 2574 4.060205 TGTGTCATCAATCATGCGATAGG 58.940 43.478 0.00 0.00 31.70 2.57
2119 2575 4.060900 GTGTCATCAATCATGCGATAGGT 58.939 43.478 0.00 0.00 31.70 3.08
2120 2576 5.221422 TGTGTCATCAATCATGCGATAGGTA 60.221 40.000 0.00 0.00 31.70 3.08
2121 2577 5.347093 GTGTCATCAATCATGCGATAGGTAG 59.653 44.000 0.00 0.00 31.70 3.18
2122 2578 5.243730 TGTCATCAATCATGCGATAGGTAGA 59.756 40.000 0.00 0.00 31.70 2.59
2123 2579 5.804473 GTCATCAATCATGCGATAGGTAGAG 59.196 44.000 0.00 0.00 31.70 2.43
2124 2580 5.478332 TCATCAATCATGCGATAGGTAGAGT 59.522 40.000 0.00 0.00 31.70 3.24
2125 2581 5.126396 TCAATCATGCGATAGGTAGAGTG 57.874 43.478 0.00 0.00 0.00 3.51
2126 2582 4.584743 TCAATCATGCGATAGGTAGAGTGT 59.415 41.667 0.00 0.00 0.00 3.55
2127 2583 3.990318 TCATGCGATAGGTAGAGTGTG 57.010 47.619 0.00 0.00 0.00 3.82
2128 2584 3.551846 TCATGCGATAGGTAGAGTGTGA 58.448 45.455 0.00 0.00 0.00 3.58
2129 2585 3.565902 TCATGCGATAGGTAGAGTGTGAG 59.434 47.826 0.00 0.00 0.00 3.51
2130 2586 3.277142 TGCGATAGGTAGAGTGTGAGA 57.723 47.619 0.00 0.00 0.00 3.27
2131 2587 3.206964 TGCGATAGGTAGAGTGTGAGAG 58.793 50.000 0.00 0.00 0.00 3.20
2132 2588 3.207778 GCGATAGGTAGAGTGTGAGAGT 58.792 50.000 0.00 0.00 0.00 3.24
2133 2589 3.628487 GCGATAGGTAGAGTGTGAGAGTT 59.372 47.826 0.00 0.00 0.00 3.01
2134 2590 4.496673 GCGATAGGTAGAGTGTGAGAGTTG 60.497 50.000 0.00 0.00 0.00 3.16
2135 2591 4.636648 CGATAGGTAGAGTGTGAGAGTTGT 59.363 45.833 0.00 0.00 0.00 3.32
2136 2592 5.447954 CGATAGGTAGAGTGTGAGAGTTGTG 60.448 48.000 0.00 0.00 0.00 3.33
2137 2593 3.833732 AGGTAGAGTGTGAGAGTTGTGA 58.166 45.455 0.00 0.00 0.00 3.58
2138 2594 3.823873 AGGTAGAGTGTGAGAGTTGTGAG 59.176 47.826 0.00 0.00 0.00 3.51
2139 2595 3.821600 GGTAGAGTGTGAGAGTTGTGAGA 59.178 47.826 0.00 0.00 0.00 3.27
2140 2596 4.083003 GGTAGAGTGTGAGAGTTGTGAGAG 60.083 50.000 0.00 0.00 0.00 3.20
2141 2597 2.890311 AGAGTGTGAGAGTTGTGAGAGG 59.110 50.000 0.00 0.00 0.00 3.69
2142 2598 1.967066 AGTGTGAGAGTTGTGAGAGGG 59.033 52.381 0.00 0.00 0.00 4.30
2143 2599 1.964223 GTGTGAGAGTTGTGAGAGGGA 59.036 52.381 0.00 0.00 0.00 4.20
2144 2600 2.365617 GTGTGAGAGTTGTGAGAGGGAA 59.634 50.000 0.00 0.00 0.00 3.97
2145 2601 3.038280 TGTGAGAGTTGTGAGAGGGAAA 58.962 45.455 0.00 0.00 0.00 3.13
2146 2602 3.454447 TGTGAGAGTTGTGAGAGGGAAAA 59.546 43.478 0.00 0.00 0.00 2.29
2147 2603 4.080582 TGTGAGAGTTGTGAGAGGGAAAAA 60.081 41.667 0.00 0.00 0.00 1.94
2148 2604 5.066593 GTGAGAGTTGTGAGAGGGAAAAAT 58.933 41.667 0.00 0.00 0.00 1.82
2149 2605 6.183361 TGTGAGAGTTGTGAGAGGGAAAAATA 60.183 38.462 0.00 0.00 0.00 1.40
2150 2606 6.147985 GTGAGAGTTGTGAGAGGGAAAAATAC 59.852 42.308 0.00 0.00 0.00 1.89
2151 2607 6.183361 TGAGAGTTGTGAGAGGGAAAAATACA 60.183 38.462 0.00 0.00 0.00 2.29
2152 2608 5.998363 AGAGTTGTGAGAGGGAAAAATACAC 59.002 40.000 0.00 0.00 0.00 2.90
2153 2609 5.690865 AGTTGTGAGAGGGAAAAATACACA 58.309 37.500 0.00 0.00 35.51 3.72
2154 2610 6.126409 AGTTGTGAGAGGGAAAAATACACAA 58.874 36.000 0.00 0.00 41.93 3.33
2155 2611 6.605594 AGTTGTGAGAGGGAAAAATACACAAA 59.394 34.615 0.00 0.00 44.28 2.83
2156 2612 7.123547 AGTTGTGAGAGGGAAAAATACACAAAA 59.876 33.333 0.00 0.00 44.28 2.44
2157 2613 7.411486 TGTGAGAGGGAAAAATACACAAAAA 57.589 32.000 0.00 0.00 34.63 1.94
2178 2634 5.403558 AAAAATATAAGAGGGGGAGGGTG 57.596 43.478 0.00 0.00 0.00 4.61
2179 2635 2.743131 ATATAAGAGGGGGAGGGTGG 57.257 55.000 0.00 0.00 0.00 4.61
2180 2636 0.571236 TATAAGAGGGGGAGGGTGGG 59.429 60.000 0.00 0.00 0.00 4.61
2181 2637 1.243230 ATAAGAGGGGGAGGGTGGGA 61.243 60.000 0.00 0.00 0.00 4.37
2182 2638 1.898190 TAAGAGGGGGAGGGTGGGAG 61.898 65.000 0.00 0.00 0.00 4.30
2183 2639 4.825679 GAGGGGGAGGGTGGGAGG 62.826 77.778 0.00 0.00 0.00 4.30
2188 2644 4.825679 GGAGGGTGGGAGGGGGAG 62.826 77.778 0.00 0.00 0.00 4.30
2193 2649 4.423209 GTGGGAGGGGGAGCTCCT 62.423 72.222 31.36 13.11 39.58 3.69
2200 2656 3.483869 GGGGAGCTCCTCGGCATT 61.484 66.667 31.36 0.00 35.95 3.56
2201 2657 2.592308 GGGAGCTCCTCGGCATTT 59.408 61.111 31.36 0.00 35.95 2.32
2202 2658 1.524849 GGGAGCTCCTCGGCATTTC 60.525 63.158 31.36 8.41 35.95 2.17
2203 2659 1.221840 GGAGCTCCTCGGCATTTCA 59.778 57.895 26.25 0.00 34.17 2.69
2204 2660 0.179034 GGAGCTCCTCGGCATTTCAT 60.179 55.000 26.25 0.00 34.17 2.57
2205 2661 1.673168 GAGCTCCTCGGCATTTCATT 58.327 50.000 0.87 0.00 34.17 2.57
2206 2662 2.019984 GAGCTCCTCGGCATTTCATTT 58.980 47.619 0.87 0.00 34.17 2.32
2207 2663 2.424956 GAGCTCCTCGGCATTTCATTTT 59.575 45.455 0.87 0.00 34.17 1.82
2208 2664 3.620488 AGCTCCTCGGCATTTCATTTTA 58.380 40.909 0.00 0.00 34.17 1.52
2209 2665 4.016444 AGCTCCTCGGCATTTCATTTTAA 58.984 39.130 0.00 0.00 34.17 1.52
2210 2666 4.462483 AGCTCCTCGGCATTTCATTTTAAA 59.538 37.500 0.00 0.00 34.17 1.52
2211 2667 4.562789 GCTCCTCGGCATTTCATTTTAAAC 59.437 41.667 0.00 0.00 0.00 2.01
2212 2668 5.622233 GCTCCTCGGCATTTCATTTTAAACT 60.622 40.000 0.00 0.00 0.00 2.66
2213 2669 6.404293 GCTCCTCGGCATTTCATTTTAAACTA 60.404 38.462 0.00 0.00 0.00 2.24
2214 2670 7.083875 TCCTCGGCATTTCATTTTAAACTAG 57.916 36.000 0.00 0.00 0.00 2.57
2215 2671 6.657541 TCCTCGGCATTTCATTTTAAACTAGT 59.342 34.615 0.00 0.00 0.00 2.57
2216 2672 6.747280 CCTCGGCATTTCATTTTAAACTAGTG 59.253 38.462 0.00 0.00 0.00 2.74
2217 2673 6.616947 TCGGCATTTCATTTTAAACTAGTGG 58.383 36.000 0.00 0.00 0.00 4.00
2218 2674 6.207810 TCGGCATTTCATTTTAAACTAGTGGT 59.792 34.615 0.00 0.00 0.00 4.16
2219 2675 6.866248 CGGCATTTCATTTTAAACTAGTGGTT 59.134 34.615 0.00 0.00 40.28 3.67
2220 2676 7.148820 CGGCATTTCATTTTAAACTAGTGGTTG 60.149 37.037 0.00 0.00 38.29 3.77
2221 2677 7.117667 GGCATTTCATTTTAAACTAGTGGTTGG 59.882 37.037 0.00 0.00 38.29 3.77
2222 2678 7.117667 GCATTTCATTTTAAACTAGTGGTTGGG 59.882 37.037 0.00 0.00 38.29 4.12
2223 2679 6.658188 TTCATTTTAAACTAGTGGTTGGGG 57.342 37.500 0.00 0.00 38.29 4.96
2224 2680 4.525100 TCATTTTAAACTAGTGGTTGGGGC 59.475 41.667 0.00 0.00 38.29 5.80
2225 2681 2.188062 TTAAACTAGTGGTTGGGGCG 57.812 50.000 0.00 0.00 38.29 6.13
2226 2682 0.321830 TAAACTAGTGGTTGGGGCGC 60.322 55.000 0.00 0.00 38.29 6.53
2227 2683 3.562732 AACTAGTGGTTGGGGCGCC 62.563 63.158 21.18 21.18 36.70 6.53
2228 2684 4.028490 CTAGTGGTTGGGGCGCCA 62.028 66.667 30.85 20.22 0.00 5.69
2252 2708 4.760047 GGCGCCGCCTGAGAAGAA 62.760 66.667 23.30 0.00 46.69 2.52
2253 2709 3.191539 GCGCCGCCTGAGAAGAAG 61.192 66.667 0.00 0.00 0.00 2.85
2254 2710 3.191539 CGCCGCCTGAGAAGAAGC 61.192 66.667 0.00 0.00 0.00 3.86
2255 2711 2.267324 GCCGCCTGAGAAGAAGCT 59.733 61.111 0.00 0.00 0.00 3.74
2256 2712 2.105466 GCCGCCTGAGAAGAAGCTG 61.105 63.158 0.00 0.00 0.00 4.24
2257 2713 1.449246 CCGCCTGAGAAGAAGCTGG 60.449 63.158 0.00 0.00 0.00 4.85
2258 2714 1.449246 CGCCTGAGAAGAAGCTGGG 60.449 63.158 0.00 0.00 0.00 4.45
2259 2715 1.682257 GCCTGAGAAGAAGCTGGGT 59.318 57.895 0.00 0.00 0.00 4.51
2260 2716 0.676151 GCCTGAGAAGAAGCTGGGTG 60.676 60.000 0.00 0.00 0.00 4.61
2261 2717 0.689623 CCTGAGAAGAAGCTGGGTGT 59.310 55.000 0.00 0.00 0.00 4.16
2262 2718 1.072965 CCTGAGAAGAAGCTGGGTGTT 59.927 52.381 0.00 0.00 0.00 3.32
2263 2719 2.149578 CTGAGAAGAAGCTGGGTGTTG 58.850 52.381 0.00 0.00 0.00 3.33
2264 2720 0.877743 GAGAAGAAGCTGGGTGTTGC 59.122 55.000 0.00 0.00 0.00 4.17
2265 2721 0.538287 AGAAGAAGCTGGGTGTTGCC 60.538 55.000 0.00 0.00 0.00 4.52
2266 2722 0.823356 GAAGAAGCTGGGTGTTGCCA 60.823 55.000 0.00 0.00 39.65 4.92
2267 2723 0.825010 AAGAAGCTGGGTGTTGCCAG 60.825 55.000 0.00 0.00 39.65 4.85
2268 2724 2.203538 AAGCTGGGTGTTGCCAGG 60.204 61.111 0.00 0.00 39.65 4.45
2269 2725 2.983725 GAAGCTGGGTGTTGCCAGGT 62.984 60.000 0.00 0.00 45.01 4.00
2270 2726 1.715019 AAGCTGGGTGTTGCCAGGTA 61.715 55.000 0.00 0.00 42.78 3.08
2271 2727 1.675641 GCTGGGTGTTGCCAGGTAG 60.676 63.158 0.00 0.00 39.65 3.18
2272 2728 1.002134 CTGGGTGTTGCCAGGTAGG 60.002 63.158 0.00 0.00 39.65 3.18
2273 2729 1.462432 TGGGTGTTGCCAGGTAGGA 60.462 57.895 0.00 0.00 41.22 2.94
2274 2730 1.299976 GGGTGTTGCCAGGTAGGAG 59.700 63.158 0.00 0.00 41.22 3.69
2275 2731 1.299976 GGTGTTGCCAGGTAGGAGG 59.700 63.158 0.00 0.00 41.22 4.30
2283 2739 4.499116 AGGTAGGAGGCGCCCCAT 62.499 66.667 28.68 18.01 37.37 4.00
2284 2740 3.942439 GGTAGGAGGCGCCCCATC 61.942 72.222 28.68 18.93 37.37 3.51
2285 2741 3.942439 GTAGGAGGCGCCCCATCC 61.942 72.222 28.68 25.81 37.37 3.51
2286 2742 4.490606 TAGGAGGCGCCCCATCCA 62.491 66.667 29.09 15.71 37.37 3.41
2289 2745 4.115199 GAGGCGCCCCATCCACTT 62.115 66.667 26.15 0.00 0.00 3.16
2290 2746 3.645268 GAGGCGCCCCATCCACTTT 62.645 63.158 26.15 0.00 0.00 2.66
2291 2747 3.140814 GGCGCCCCATCCACTTTC 61.141 66.667 18.11 0.00 0.00 2.62
2292 2748 3.140814 GCGCCCCATCCACTTTCC 61.141 66.667 0.00 0.00 0.00 3.13
2293 2749 2.677228 CGCCCCATCCACTTTCCT 59.323 61.111 0.00 0.00 0.00 3.36
2294 2750 1.000896 CGCCCCATCCACTTTCCTT 60.001 57.895 0.00 0.00 0.00 3.36
2295 2751 0.611896 CGCCCCATCCACTTTCCTTT 60.612 55.000 0.00 0.00 0.00 3.11
2296 2752 1.644509 GCCCCATCCACTTTCCTTTT 58.355 50.000 0.00 0.00 0.00 2.27
2297 2753 1.977854 GCCCCATCCACTTTCCTTTTT 59.022 47.619 0.00 0.00 0.00 1.94
2298 2754 3.169908 GCCCCATCCACTTTCCTTTTTA 58.830 45.455 0.00 0.00 0.00 1.52
2299 2755 3.774766 GCCCCATCCACTTTCCTTTTTAT 59.225 43.478 0.00 0.00 0.00 1.40
2300 2756 4.959839 GCCCCATCCACTTTCCTTTTTATA 59.040 41.667 0.00 0.00 0.00 0.98
2301 2757 5.069119 GCCCCATCCACTTTCCTTTTTATAG 59.931 44.000 0.00 0.00 0.00 1.31
2302 2758 6.194967 CCCCATCCACTTTCCTTTTTATAGT 58.805 40.000 0.00 0.00 0.00 2.12
2303 2759 7.351166 CCCCATCCACTTTCCTTTTTATAGTA 58.649 38.462 0.00 0.00 0.00 1.82
2304 2760 8.004801 CCCCATCCACTTTCCTTTTTATAGTAT 58.995 37.037 0.00 0.00 0.00 2.12
2305 2761 8.850156 CCCATCCACTTTCCTTTTTATAGTATG 58.150 37.037 0.00 0.00 0.00 2.39
2306 2762 9.408648 CCATCCACTTTCCTTTTTATAGTATGT 57.591 33.333 0.00 0.00 0.00 2.29
2322 2778 5.907197 AGTATGTAGTTTGCATCATACGC 57.093 39.130 14.50 0.00 43.89 4.42
2323 2779 5.601662 AGTATGTAGTTTGCATCATACGCT 58.398 37.500 14.50 5.44 43.89 5.07
2324 2780 6.049149 AGTATGTAGTTTGCATCATACGCTT 58.951 36.000 14.50 0.00 43.89 4.68
2325 2781 7.207383 AGTATGTAGTTTGCATCATACGCTTA 58.793 34.615 14.50 0.00 43.89 3.09
2326 2782 7.872993 AGTATGTAGTTTGCATCATACGCTTAT 59.127 33.333 14.50 0.00 43.89 1.73
2327 2783 6.918892 TGTAGTTTGCATCATACGCTTATT 57.081 33.333 0.00 0.00 0.00 1.40
2328 2784 8.601845 ATGTAGTTTGCATCATACGCTTATTA 57.398 30.769 0.00 0.00 0.00 0.98
2329 2785 8.426881 TGTAGTTTGCATCATACGCTTATTAA 57.573 30.769 0.00 0.00 0.00 1.40
2330 2786 8.547894 TGTAGTTTGCATCATACGCTTATTAAG 58.452 33.333 0.00 0.00 0.00 1.85
2355 2811 3.879892 GCAAGAAGCTAGGATAAACCAGG 59.120 47.826 0.00 0.00 39.95 4.45
2356 2812 4.455606 CAAGAAGCTAGGATAAACCAGGG 58.544 47.826 0.00 0.00 42.04 4.45
2357 2813 4.008916 AGAAGCTAGGATAAACCAGGGA 57.991 45.455 0.00 0.00 42.04 4.20
2358 2814 4.571951 AGAAGCTAGGATAAACCAGGGAT 58.428 43.478 0.00 0.00 42.04 3.85
2359 2815 4.978388 AGAAGCTAGGATAAACCAGGGATT 59.022 41.667 0.00 0.00 42.04 3.01
2360 2816 5.433381 AGAAGCTAGGATAAACCAGGGATTT 59.567 40.000 0.00 0.00 42.04 2.17
2361 2817 5.311844 AGCTAGGATAAACCAGGGATTTC 57.688 43.478 0.00 0.00 42.04 2.17
2362 2818 4.726825 AGCTAGGATAAACCAGGGATTTCA 59.273 41.667 0.00 0.00 42.04 2.69
2363 2819 5.373854 AGCTAGGATAAACCAGGGATTTCAT 59.626 40.000 0.00 0.00 42.04 2.57
2364 2820 6.562608 AGCTAGGATAAACCAGGGATTTCATA 59.437 38.462 0.00 0.00 42.04 2.15
2365 2821 7.240616 AGCTAGGATAAACCAGGGATTTCATAT 59.759 37.037 0.00 0.00 42.04 1.78
2366 2822 7.554476 GCTAGGATAAACCAGGGATTTCATATC 59.446 40.741 0.00 0.00 42.04 1.63
2367 2823 7.406620 AGGATAAACCAGGGATTTCATATCA 57.593 36.000 0.00 0.00 42.04 2.15
2368 2824 8.004697 AGGATAAACCAGGGATTTCATATCAT 57.995 34.615 0.00 0.00 42.04 2.45
2369 2825 8.112183 AGGATAAACCAGGGATTTCATATCATC 58.888 37.037 0.00 0.00 42.04 2.92
2370 2826 7.890127 GGATAAACCAGGGATTTCATATCATCA 59.110 37.037 0.00 0.00 38.79 3.07
2371 2827 8.874744 ATAAACCAGGGATTTCATATCATCAG 57.125 34.615 0.00 0.00 0.00 2.90
2372 2828 5.252586 ACCAGGGATTTCATATCATCAGG 57.747 43.478 0.00 0.00 0.00 3.86
2373 2829 4.915809 ACCAGGGATTTCATATCATCAGGA 59.084 41.667 0.00 0.00 0.00 3.86
2374 2830 5.373555 ACCAGGGATTTCATATCATCAGGAA 59.626 40.000 0.00 0.00 0.00 3.36
2375 2831 5.709164 CCAGGGATTTCATATCATCAGGAAC 59.291 44.000 0.00 0.00 0.00 3.62
2376 2832 6.301486 CAGGGATTTCATATCATCAGGAACA 58.699 40.000 0.00 0.00 0.00 3.18
2377 2833 6.774170 CAGGGATTTCATATCATCAGGAACAA 59.226 38.462 0.00 0.00 0.00 2.83
2378 2834 7.286087 CAGGGATTTCATATCATCAGGAACAAA 59.714 37.037 0.00 0.00 0.00 2.83
2379 2835 7.840716 AGGGATTTCATATCATCAGGAACAAAA 59.159 33.333 0.00 0.00 0.00 2.44
2380 2836 8.645110 GGGATTTCATATCATCAGGAACAAAAT 58.355 33.333 0.00 0.00 0.00 1.82
2387 2843 9.865321 CATATCATCAGGAACAAAATTGAAAGT 57.135 29.630 0.00 0.00 0.00 2.66
2389 2845 8.822652 ATCATCAGGAACAAAATTGAAAGTTC 57.177 30.769 0.00 0.00 39.59 3.01
2390 2846 7.780064 TCATCAGGAACAAAATTGAAAGTTCA 58.220 30.769 0.00 0.00 41.49 3.18
2391 2847 8.423349 TCATCAGGAACAAAATTGAAAGTTCAT 58.577 29.630 0.00 0.00 41.49 2.57
2392 2848 9.048446 CATCAGGAACAAAATTGAAAGTTCATT 57.952 29.630 0.00 0.00 41.49 2.57
2394 2850 9.528018 TCAGGAACAAAATTGAAAGTTCATTAC 57.472 29.630 0.00 0.00 41.49 1.89
2395 2851 9.311916 CAGGAACAAAATTGAAAGTTCATTACA 57.688 29.630 0.00 0.00 41.49 2.41
2396 2852 9.313118 AGGAACAAAATTGAAAGTTCATTACAC 57.687 29.630 0.00 0.00 41.49 2.90
2397 2853 9.092876 GGAACAAAATTGAAAGTTCATTACACA 57.907 29.630 0.00 0.00 41.49 3.72
2405 2861 8.815141 TTGAAAGTTCATTACACATTTGATGG 57.185 30.769 0.00 0.00 37.00 3.51
2406 2862 8.175925 TGAAAGTTCATTACACATTTGATGGA 57.824 30.769 0.00 0.00 31.01 3.41
2407 2863 8.637099 TGAAAGTTCATTACACATTTGATGGAA 58.363 29.630 0.00 0.00 31.01 3.53
2408 2864 9.474920 GAAAGTTCATTACACATTTGATGGAAA 57.525 29.630 0.00 0.00 33.60 3.13
2409 2865 9.829507 AAAGTTCATTACACATTTGATGGAAAA 57.170 25.926 0.00 0.00 33.60 2.29
2410 2866 9.480053 AAGTTCATTACACATTTGATGGAAAAG 57.520 29.630 0.00 0.00 33.60 2.27
2411 2867 8.641541 AGTTCATTACACATTTGATGGAAAAGT 58.358 29.630 0.00 0.00 33.60 2.66
2412 2868 8.702438 GTTCATTACACATTTGATGGAAAAGTG 58.298 33.333 0.00 0.00 44.99 3.16
2413 2869 8.175925 TCATTACACATTTGATGGAAAAGTGA 57.824 30.769 8.93 0.00 43.10 3.41
2414 2870 8.081633 TCATTACACATTTGATGGAAAAGTGAC 58.918 33.333 8.93 0.00 43.10 3.67
2415 2871 5.850557 ACACATTTGATGGAAAAGTGACA 57.149 34.783 8.93 0.00 43.10 3.58
2416 2872 5.591099 ACACATTTGATGGAAAAGTGACAC 58.409 37.500 8.93 0.00 43.10 3.67
2417 2873 5.126869 ACACATTTGATGGAAAAGTGACACA 59.873 36.000 8.59 0.00 43.10 3.72
2418 2874 6.183360 ACACATTTGATGGAAAAGTGACACAT 60.183 34.615 8.59 0.00 43.10 3.21
2419 2875 6.144886 CACATTTGATGGAAAAGTGACACATG 59.855 38.462 8.59 0.00 43.10 3.21
2420 2876 3.921119 TGATGGAAAAGTGACACATGC 57.079 42.857 8.59 0.00 0.00 4.06
2421 2877 3.220940 TGATGGAAAAGTGACACATGCA 58.779 40.909 8.59 5.60 0.00 3.96
2422 2878 3.827876 TGATGGAAAAGTGACACATGCAT 59.172 39.130 8.59 10.11 0.00 3.96
2423 2879 3.921119 TGGAAAAGTGACACATGCATC 57.079 42.857 8.59 0.00 0.00 3.91
2424 2880 3.489355 TGGAAAAGTGACACATGCATCT 58.511 40.909 8.59 0.00 0.00 2.90
2425 2881 3.890756 TGGAAAAGTGACACATGCATCTT 59.109 39.130 8.59 0.00 0.00 2.40
2426 2882 4.232221 GGAAAAGTGACACATGCATCTTG 58.768 43.478 8.59 0.00 0.00 3.02
2427 2883 3.928727 AAAGTGACACATGCATCTTGG 57.071 42.857 8.59 0.00 0.00 3.61
2428 2884 1.171308 AGTGACACATGCATCTTGGC 58.829 50.000 8.59 0.00 0.00 4.52
2429 2885 1.171308 GTGACACATGCATCTTGGCT 58.829 50.000 11.23 0.00 34.04 4.75
2430 2886 1.131883 GTGACACATGCATCTTGGCTC 59.868 52.381 11.23 4.94 34.04 4.70
2431 2887 1.003928 TGACACATGCATCTTGGCTCT 59.996 47.619 11.23 0.00 34.04 4.09
2432 2888 2.236893 TGACACATGCATCTTGGCTCTA 59.763 45.455 11.23 0.00 34.04 2.43
2433 2889 3.273434 GACACATGCATCTTGGCTCTAA 58.727 45.455 0.00 0.00 34.04 2.10
2434 2890 3.012518 ACACATGCATCTTGGCTCTAAC 58.987 45.455 0.00 0.00 34.04 2.34
2435 2891 3.011818 CACATGCATCTTGGCTCTAACA 58.988 45.455 0.00 0.00 34.04 2.41
2436 2892 3.630769 CACATGCATCTTGGCTCTAACAT 59.369 43.478 0.00 0.00 34.04 2.71
2437 2893 3.881688 ACATGCATCTTGGCTCTAACATC 59.118 43.478 0.00 0.00 34.04 3.06
2438 2894 3.632643 TGCATCTTGGCTCTAACATCA 57.367 42.857 0.00 0.00 34.04 3.07
2439 2895 3.273434 TGCATCTTGGCTCTAACATCAC 58.727 45.455 0.00 0.00 34.04 3.06
2440 2896 3.273434 GCATCTTGGCTCTAACATCACA 58.727 45.455 0.00 0.00 0.00 3.58
2441 2897 3.881688 GCATCTTGGCTCTAACATCACAT 59.118 43.478 0.00 0.00 0.00 3.21
2442 2898 4.337555 GCATCTTGGCTCTAACATCACATT 59.662 41.667 0.00 0.00 0.00 2.71
2443 2899 5.732528 GCATCTTGGCTCTAACATCACATTG 60.733 44.000 0.00 0.00 0.00 2.82
2444 2900 5.164620 TCTTGGCTCTAACATCACATTGA 57.835 39.130 0.00 0.00 0.00 2.57
2445 2901 5.748402 TCTTGGCTCTAACATCACATTGAT 58.252 37.500 0.00 0.00 37.65 2.57
2446 2902 6.888105 TCTTGGCTCTAACATCACATTGATA 58.112 36.000 0.00 0.00 34.28 2.15
2447 2903 7.337938 TCTTGGCTCTAACATCACATTGATAA 58.662 34.615 0.00 0.00 34.28 1.75
2448 2904 7.828717 TCTTGGCTCTAACATCACATTGATAAA 59.171 33.333 0.00 0.00 34.28 1.40
2449 2905 7.558161 TGGCTCTAACATCACATTGATAAAG 57.442 36.000 0.00 0.00 34.28 1.85
2450 2906 7.337938 TGGCTCTAACATCACATTGATAAAGA 58.662 34.615 0.00 0.00 34.28 2.52
2451 2907 7.496920 TGGCTCTAACATCACATTGATAAAGAG 59.503 37.037 12.75 12.75 38.21 2.85
2452 2908 7.497249 GGCTCTAACATCACATTGATAAAGAGT 59.503 37.037 15.76 0.00 37.87 3.24
2453 2909 9.534565 GCTCTAACATCACATTGATAAAGAGTA 57.465 33.333 15.76 0.00 37.87 2.59
2458 2914 9.725019 AACATCACATTGATAAAGAGTACTGAA 57.275 29.630 0.00 0.00 34.28 3.02
2459 2915 9.725019 ACATCACATTGATAAAGAGTACTGAAA 57.275 29.630 0.00 0.00 34.28 2.69
2470 2926 9.890629 ATAAAGAGTACTGAAATAATCTGCACA 57.109 29.630 0.00 0.00 30.22 4.57
2471 2927 8.621532 AAAGAGTACTGAAATAATCTGCACAA 57.378 30.769 0.00 0.00 30.22 3.33
2472 2928 8.621532 AAGAGTACTGAAATAATCTGCACAAA 57.378 30.769 0.00 0.00 30.22 2.83
2473 2929 8.621532 AGAGTACTGAAATAATCTGCACAAAA 57.378 30.769 0.00 0.00 28.66 2.44
2474 2930 9.066892 AGAGTACTGAAATAATCTGCACAAAAA 57.933 29.630 0.00 0.00 28.66 1.94
2475 2931 9.118236 GAGTACTGAAATAATCTGCACAAAAAC 57.882 33.333 0.00 0.00 0.00 2.43
2476 2932 8.629158 AGTACTGAAATAATCTGCACAAAAACA 58.371 29.630 0.00 0.00 0.00 2.83
2477 2933 9.243637 GTACTGAAATAATCTGCACAAAAACAA 57.756 29.630 0.00 0.00 0.00 2.83
2478 2934 8.356533 ACTGAAATAATCTGCACAAAAACAAG 57.643 30.769 0.00 0.00 0.00 3.16
2479 2935 7.439056 ACTGAAATAATCTGCACAAAAACAAGG 59.561 33.333 0.00 0.00 0.00 3.61
2480 2936 7.495901 TGAAATAATCTGCACAAAAACAAGGA 58.504 30.769 0.00 0.00 0.00 3.36
2481 2937 7.437862 TGAAATAATCTGCACAAAAACAAGGAC 59.562 33.333 0.00 0.00 0.00 3.85
2482 2938 4.734398 AATCTGCACAAAAACAAGGACA 57.266 36.364 0.00 0.00 0.00 4.02
2483 2939 4.734398 ATCTGCACAAAAACAAGGACAA 57.266 36.364 0.00 0.00 0.00 3.18
2484 2940 4.527509 TCTGCACAAAAACAAGGACAAA 57.472 36.364 0.00 0.00 0.00 2.83
2485 2941 4.887748 TCTGCACAAAAACAAGGACAAAA 58.112 34.783 0.00 0.00 0.00 2.44
2486 2942 5.300752 TCTGCACAAAAACAAGGACAAAAA 58.699 33.333 0.00 0.00 0.00 1.94
2487 2943 5.178438 TCTGCACAAAAACAAGGACAAAAAC 59.822 36.000 0.00 0.00 0.00 2.43
2488 2944 4.816385 TGCACAAAAACAAGGACAAAAACA 59.184 33.333 0.00 0.00 0.00 2.83
2489 2945 5.143660 GCACAAAAACAAGGACAAAAACAC 58.856 37.500 0.00 0.00 0.00 3.32
2490 2946 5.049749 GCACAAAAACAAGGACAAAAACACT 60.050 36.000 0.00 0.00 0.00 3.55
2491 2947 6.361899 CACAAAAACAAGGACAAAAACACTG 58.638 36.000 0.00 0.00 0.00 3.66
2492 2948 6.201806 CACAAAAACAAGGACAAAAACACTGA 59.798 34.615 0.00 0.00 0.00 3.41
2493 2949 6.423604 ACAAAAACAAGGACAAAAACACTGAG 59.576 34.615 0.00 0.00 0.00 3.35
2494 2950 3.782889 ACAAGGACAAAAACACTGAGC 57.217 42.857 0.00 0.00 0.00 4.26
2495 2951 2.097466 ACAAGGACAAAAACACTGAGCG 59.903 45.455 0.00 0.00 0.00 5.03
2496 2952 2.038387 AGGACAAAAACACTGAGCGT 57.962 45.000 0.00 0.00 0.00 5.07
2504 2960 4.509756 CACTGAGCGTGGATGGAG 57.490 61.111 0.00 0.00 40.02 3.86
2505 2961 1.593787 CACTGAGCGTGGATGGAGT 59.406 57.895 0.00 0.00 40.02 3.85
2506 2962 0.738762 CACTGAGCGTGGATGGAGTG 60.739 60.000 0.00 0.00 40.02 3.51
2507 2963 1.153489 CTGAGCGTGGATGGAGTGG 60.153 63.158 0.00 0.00 0.00 4.00
2508 2964 2.512515 GAGCGTGGATGGAGTGGC 60.513 66.667 0.00 0.00 0.00 5.01
2509 2965 3.005539 AGCGTGGATGGAGTGGCT 61.006 61.111 0.00 0.00 0.00 4.75
2510 2966 2.821366 GCGTGGATGGAGTGGCTG 60.821 66.667 0.00 0.00 0.00 4.85
2511 2967 2.981302 CGTGGATGGAGTGGCTGA 59.019 61.111 0.00 0.00 0.00 4.26
2512 2968 1.524002 CGTGGATGGAGTGGCTGAT 59.476 57.895 0.00 0.00 0.00 2.90
2513 2969 0.531532 CGTGGATGGAGTGGCTGATC 60.532 60.000 0.00 0.00 0.00 2.92
2514 2970 0.835941 GTGGATGGAGTGGCTGATCT 59.164 55.000 0.00 0.00 0.00 2.75
2515 2971 1.211457 GTGGATGGAGTGGCTGATCTT 59.789 52.381 0.00 0.00 0.00 2.40
2516 2972 1.487976 TGGATGGAGTGGCTGATCTTC 59.512 52.381 0.00 0.00 0.00 2.87
2517 2973 1.487976 GGATGGAGTGGCTGATCTTCA 59.512 52.381 0.00 0.00 0.00 3.02
2518 2974 2.559440 GATGGAGTGGCTGATCTTCAC 58.441 52.381 0.00 0.05 0.00 3.18
2519 2975 0.615331 TGGAGTGGCTGATCTTCACC 59.385 55.000 0.00 0.00 32.29 4.02
2520 2976 0.908198 GGAGTGGCTGATCTTCACCT 59.092 55.000 0.00 0.00 32.29 4.00
2521 2977 1.134551 GGAGTGGCTGATCTTCACCTC 60.135 57.143 0.00 0.00 32.29 3.85
2522 2978 0.534412 AGTGGCTGATCTTCACCTCG 59.466 55.000 0.00 0.00 32.29 4.63
2523 2979 0.532573 GTGGCTGATCTTCACCTCGA 59.467 55.000 0.00 0.00 0.00 4.04
2524 2980 0.820226 TGGCTGATCTTCACCTCGAG 59.180 55.000 5.13 5.13 0.00 4.04
2525 2981 0.529555 GGCTGATCTTCACCTCGAGC 60.530 60.000 6.99 0.00 0.00 5.03
2526 2982 0.459489 GCTGATCTTCACCTCGAGCT 59.541 55.000 6.99 0.00 0.00 4.09
2527 2983 1.535860 GCTGATCTTCACCTCGAGCTC 60.536 57.143 6.99 2.73 0.00 4.09
2528 2984 1.747924 CTGATCTTCACCTCGAGCTCA 59.252 52.381 15.40 0.00 0.00 4.26
2529 2985 2.165234 CTGATCTTCACCTCGAGCTCAA 59.835 50.000 15.40 0.00 0.00 3.02
2530 2986 2.762887 TGATCTTCACCTCGAGCTCAAT 59.237 45.455 15.40 0.00 0.00 2.57
2531 2987 2.662006 TCTTCACCTCGAGCTCAATG 57.338 50.000 15.40 5.88 0.00 2.82
2532 2988 1.005340 CTTCACCTCGAGCTCAATGC 58.995 55.000 15.40 0.00 43.29 3.56
2533 2989 0.321346 TTCACCTCGAGCTCAATGCA 59.679 50.000 15.40 0.00 45.94 3.96
2534 2990 0.538584 TCACCTCGAGCTCAATGCAT 59.461 50.000 15.40 0.00 45.94 3.96
2535 2991 0.935898 CACCTCGAGCTCAATGCATC 59.064 55.000 15.40 0.00 45.94 3.91
2536 2992 0.179062 ACCTCGAGCTCAATGCATCC 60.179 55.000 15.40 0.00 45.94 3.51
2537 2993 0.179065 CCTCGAGCTCAATGCATCCA 60.179 55.000 15.40 0.00 45.94 3.41
2538 2994 0.935898 CTCGAGCTCAATGCATCCAC 59.064 55.000 15.40 0.00 45.94 4.02
2539 2995 0.538584 TCGAGCTCAATGCATCCACT 59.461 50.000 15.40 0.00 45.94 4.00
2540 2996 1.065926 TCGAGCTCAATGCATCCACTT 60.066 47.619 15.40 0.00 45.94 3.16
2541 2997 1.063616 CGAGCTCAATGCATCCACTTG 59.936 52.381 15.40 0.00 45.94 3.16
2542 2998 0.815734 AGCTCAATGCATCCACTTGC 59.184 50.000 0.00 0.00 45.94 4.01
2562 3018 1.863454 CATCAGTGCGATGTTAGAGCC 59.137 52.381 0.00 0.00 45.61 4.70
2563 3019 0.894835 TCAGTGCGATGTTAGAGCCA 59.105 50.000 0.00 0.00 0.00 4.75
2564 3020 1.134995 TCAGTGCGATGTTAGAGCCAG 60.135 52.381 0.00 0.00 0.00 4.85
2565 3021 0.898320 AGTGCGATGTTAGAGCCAGT 59.102 50.000 0.00 0.00 0.00 4.00
2566 3022 1.134965 AGTGCGATGTTAGAGCCAGTC 60.135 52.381 0.00 0.00 0.00 3.51
2567 3023 1.134965 GTGCGATGTTAGAGCCAGTCT 60.135 52.381 0.00 0.00 39.59 3.24
2568 3024 1.550524 TGCGATGTTAGAGCCAGTCTT 59.449 47.619 0.00 0.00 36.64 3.01
2569 3025 2.197577 GCGATGTTAGAGCCAGTCTTC 58.802 52.381 0.00 0.00 36.64 2.87
2570 3026 2.455032 CGATGTTAGAGCCAGTCTTCG 58.545 52.381 0.00 0.00 36.64 3.79
2571 3027 2.197577 GATGTTAGAGCCAGTCTTCGC 58.802 52.381 0.00 0.00 36.64 4.70
2572 3028 0.246635 TGTTAGAGCCAGTCTTCGCC 59.753 55.000 0.00 0.00 36.64 5.54
2573 3029 0.802607 GTTAGAGCCAGTCTTCGCCG 60.803 60.000 0.00 0.00 36.64 6.46
2574 3030 1.248785 TTAGAGCCAGTCTTCGCCGT 61.249 55.000 0.00 0.00 36.64 5.68
2575 3031 1.248785 TAGAGCCAGTCTTCGCCGTT 61.249 55.000 0.00 0.00 36.64 4.44
2576 3032 2.357517 AGCCAGTCTTCGCCGTTG 60.358 61.111 0.00 0.00 0.00 4.10
2577 3033 4.090057 GCCAGTCTTCGCCGTTGC 62.090 66.667 0.00 0.00 0.00 4.17
2578 3034 3.423154 CCAGTCTTCGCCGTTGCC 61.423 66.667 0.00 0.00 0.00 4.52
2579 3035 3.777925 CAGTCTTCGCCGTTGCCG 61.778 66.667 0.00 0.00 0.00 5.69
2592 3048 3.750639 CGTTGCCGGTAAACAATGTAT 57.249 42.857 6.53 0.00 0.00 2.29
2593 3049 3.676540 CGTTGCCGGTAAACAATGTATC 58.323 45.455 6.53 0.00 0.00 2.24
2594 3050 3.372822 CGTTGCCGGTAAACAATGTATCT 59.627 43.478 6.53 0.00 0.00 1.98
2595 3051 4.142773 CGTTGCCGGTAAACAATGTATCTT 60.143 41.667 6.53 0.00 0.00 2.40
2596 3052 5.618195 CGTTGCCGGTAAACAATGTATCTTT 60.618 40.000 6.53 0.00 0.00 2.52
2597 3053 5.968528 TGCCGGTAAACAATGTATCTTTT 57.031 34.783 1.90 0.00 0.00 2.27
2598 3054 6.334102 TGCCGGTAAACAATGTATCTTTTT 57.666 33.333 1.90 0.00 0.00 1.94
2599 3055 6.153067 TGCCGGTAAACAATGTATCTTTTTG 58.847 36.000 1.90 0.00 0.00 2.44
2600 3056 6.016192 TGCCGGTAAACAATGTATCTTTTTGA 60.016 34.615 1.90 0.00 0.00 2.69
2601 3057 6.526674 GCCGGTAAACAATGTATCTTTTTGAG 59.473 38.462 1.90 0.00 0.00 3.02
2602 3058 6.526674 CCGGTAAACAATGTATCTTTTTGAGC 59.473 38.462 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.948278 AGCGAGTATTTCCTTACAATCATAC 57.052 36.000 0.00 0.00 0.00 2.39
37 38 5.873164 ACGAAAGCGAGTATTTCCTTACAAT 59.127 36.000 0.00 0.00 41.64 2.71
73 74 9.274206 GGAAACTTAAGAATAGCGAGGAAATAT 57.726 33.333 10.09 0.00 0.00 1.28
79 80 4.127907 GGGGAAACTTAAGAATAGCGAGG 58.872 47.826 10.09 0.00 0.00 4.63
183 191 7.931407 TGCGAGTTATATGACACCAGATTAAAT 59.069 33.333 0.00 0.00 0.00 1.40
186 194 6.399639 TGCGAGTTATATGACACCAGATTA 57.600 37.500 0.00 0.00 0.00 1.75
262 271 7.219154 TGCGTTTGTACTGTGTTGAAAATAAAG 59.781 33.333 0.00 0.00 0.00 1.85
263 272 7.027760 TGCGTTTGTACTGTGTTGAAAATAAA 58.972 30.769 0.00 0.00 0.00 1.40
266 275 4.987832 TGCGTTTGTACTGTGTTGAAAAT 58.012 34.783 0.00 0.00 0.00 1.82
283 292 4.642699 GCATATGTATGAGCGTCTGCGTT 61.643 47.826 4.29 0.00 39.04 4.84
303 312 7.408910 CGTTCATAAGAATGATTGTATGTGCA 58.591 34.615 0.00 0.00 41.73 4.57
313 322 4.694982 TGTGTGTGCGTTCATAAGAATGAT 59.305 37.500 4.12 0.00 41.73 2.45
318 327 2.139917 GGTGTGTGTGCGTTCATAAGA 58.860 47.619 0.00 0.00 0.00 2.10
332 341 3.309296 CACATAGGGATAGAGGGTGTGT 58.691 50.000 0.00 0.00 32.92 3.72
340 349 2.628178 CGAAGGTGCACATAGGGATAGA 59.372 50.000 20.43 0.00 0.00 1.98
344 353 1.271856 TTCGAAGGTGCACATAGGGA 58.728 50.000 20.43 7.07 0.00 4.20
352 364 1.873903 GCTCAGTCTTTCGAAGGTGCA 60.874 52.381 7.20 0.00 0.00 4.57
359 371 0.039437 GTGTCGGCTCAGTCTTTCGA 60.039 55.000 0.00 0.00 0.00 3.71
363 375 0.969149 TGATGTGTCGGCTCAGTCTT 59.031 50.000 0.00 0.00 0.00 3.01
404 416 2.079158 CCGACTACGAAGGTGTCTGTA 58.921 52.381 0.00 0.00 42.66 2.74
450 462 2.101249 GGTCGTATTTCCCCGTGATGTA 59.899 50.000 0.00 0.00 0.00 2.29
458 470 2.021457 CATTGGTGGTCGTATTTCCCC 58.979 52.381 0.00 0.00 0.00 4.81
466 499 1.416401 AGACTTGACATTGGTGGTCGT 59.584 47.619 0.00 0.00 38.10 4.34
488 521 2.287915 CCAACTCACAAGGTTCAAGTCG 59.712 50.000 0.00 0.00 0.00 4.18
518 551 9.670442 ATTATACTCAGATGGTTAGGTTCCTTA 57.330 33.333 0.00 0.00 0.00 2.69
586 619 6.711277 TGCTCTAGCCTCTCATTTTCTAAAA 58.289 36.000 0.00 0.00 41.18 1.52
587 620 6.299805 TGCTCTAGCCTCTCATTTTCTAAA 57.700 37.500 0.00 0.00 41.18 1.85
596 629 1.326213 GCACCTGCTCTAGCCTCTCA 61.326 60.000 0.00 0.00 41.18 3.27
602 635 0.801251 CAACTTGCACCTGCTCTAGC 59.199 55.000 0.00 0.00 42.66 3.42
635 888 8.810652 TTGATTTACAAAACCATAGCTTCAAC 57.189 30.769 0.00 0.00 35.39 3.18
677 930 6.402222 GGCCTATCTATGTCTAAGTGGATTG 58.598 44.000 0.00 0.00 0.00 2.67
868 1307 0.937304 GAGTGTTTTGTGAGCGAGCA 59.063 50.000 0.00 0.00 0.00 4.26
920 1359 4.550422 AGAGCTGCATGTACGTATGTATG 58.450 43.478 1.02 5.87 32.11 2.39
921 1360 4.613850 CGAGAGCTGCATGTACGTATGTAT 60.614 45.833 1.02 0.00 32.11 2.29
925 1364 1.676529 ACGAGAGCTGCATGTACGTAT 59.323 47.619 1.02 0.00 0.00 3.06
1166 1611 4.436998 CGTCCACCGTCCTGCTCC 62.437 72.222 0.00 0.00 0.00 4.70
1257 1702 1.344953 TGGTGACCAGGTTCAGCTGT 61.345 55.000 14.67 0.00 43.19 4.40
1620 2065 4.563976 ACACGTGCGAATTGGTATTAGTAC 59.436 41.667 17.22 0.00 31.82 2.73
1652 2097 4.512944 AGAAGTACGTTACTCTGTGTCGAA 59.487 41.667 0.00 0.00 38.26 3.71
1719 2175 6.538021 AGAAGCACTGATCAAGATGAACATAC 59.462 38.462 0.00 0.00 28.76 2.39
1755 2211 8.443953 AGGAGATGACAAAGCTAATAAATGAC 57.556 34.615 0.00 0.00 0.00 3.06
1773 2229 8.272545 TGTCTCAATAATGACAAAAGGAGATG 57.727 34.615 0.00 0.00 39.82 2.90
1816 2272 9.522804 TTAATGCATTAACAAAATATCCCGAAC 57.477 29.630 24.63 0.00 0.00 3.95
1887 2343 7.096551 GGCTGGTTTTATTTTCTGCTCAATTA 58.903 34.615 0.00 0.00 0.00 1.40
1909 2365 5.957842 TGTGTTCTTTGATATTTTCGGCT 57.042 34.783 0.00 0.00 0.00 5.52
1912 2368 9.438291 GGTATCATGTGTTCTTTGATATTTTCG 57.562 33.333 0.00 0.00 35.46 3.46
1949 2405 9.545105 AGCAATCTCAAAACAAATAATGTCAAA 57.455 25.926 0.00 0.00 42.99 2.69
1950 2406 9.545105 AAGCAATCTCAAAACAAATAATGTCAA 57.455 25.926 0.00 0.00 42.99 3.18
1991 2447 6.715347 AGGTAAATGGATGAAAATAGGTGC 57.285 37.500 0.00 0.00 0.00 5.01
1994 2450 7.896383 TGGAAGGTAAATGGATGAAAATAGG 57.104 36.000 0.00 0.00 0.00 2.57
2037 2493 6.435430 ACCAACATTACGTATGTACTCGTA 57.565 37.500 0.00 11.94 46.75 3.43
2038 2494 5.314923 ACCAACATTACGTATGTACTCGT 57.685 39.130 13.46 13.46 46.75 4.18
2039 2495 5.397534 GCTACCAACATTACGTATGTACTCG 59.602 44.000 0.00 0.00 46.75 4.18
2040 2496 6.267817 TGCTACCAACATTACGTATGTACTC 58.732 40.000 0.00 0.00 46.75 2.59
2041 2497 6.095860 TCTGCTACCAACATTACGTATGTACT 59.904 38.462 0.00 0.00 46.75 2.73
2042 2498 6.267817 TCTGCTACCAACATTACGTATGTAC 58.732 40.000 0.00 0.00 46.75 2.90
2043 2499 6.453926 TCTGCTACCAACATTACGTATGTA 57.546 37.500 0.00 0.00 46.75 2.29
2045 2501 5.983118 TCATCTGCTACCAACATTACGTATG 59.017 40.000 0.00 0.00 40.26 2.39
2046 2502 6.156748 TCATCTGCTACCAACATTACGTAT 57.843 37.500 0.00 0.00 0.00 3.06
2065 2521 4.391830 TGTTATTTGGAGCGTGAACTCATC 59.608 41.667 0.00 0.00 38.50 2.92
2090 2546 7.729966 TATCGCATGATTGATGACACAAATGTC 60.730 37.037 0.00 0.37 44.25 3.06
2091 2547 4.156373 TCGCATGATTGATGACACAAATGT 59.844 37.500 0.00 0.00 43.71 2.71
2092 2548 4.664188 TCGCATGATTGATGACACAAATG 58.336 39.130 0.00 0.00 33.31 2.32
2093 2549 4.968812 TCGCATGATTGATGACACAAAT 57.031 36.364 0.00 0.00 33.31 2.32
2094 2550 4.968812 ATCGCATGATTGATGACACAAA 57.031 36.364 0.00 0.00 33.31 2.83
2095 2551 4.512571 CCTATCGCATGATTGATGACACAA 59.487 41.667 0.00 0.00 35.99 3.33
2096 2552 4.060205 CCTATCGCATGATTGATGACACA 58.940 43.478 0.00 0.00 35.99 3.72
2097 2553 4.060900 ACCTATCGCATGATTGATGACAC 58.939 43.478 0.00 0.00 35.99 3.67
2098 2554 4.341366 ACCTATCGCATGATTGATGACA 57.659 40.909 0.00 0.00 35.99 3.58
2099 2555 5.714047 TCTACCTATCGCATGATTGATGAC 58.286 41.667 0.00 0.00 35.99 3.06
2100 2556 5.478332 ACTCTACCTATCGCATGATTGATGA 59.522 40.000 0.00 0.00 35.99 2.92
2101 2557 5.575995 CACTCTACCTATCGCATGATTGATG 59.424 44.000 0.00 0.00 35.99 3.07
2102 2558 5.244851 ACACTCTACCTATCGCATGATTGAT 59.755 40.000 0.00 0.00 35.99 2.57
2103 2559 4.584743 ACACTCTACCTATCGCATGATTGA 59.415 41.667 0.00 0.00 35.99 2.57
2104 2560 4.683320 CACACTCTACCTATCGCATGATTG 59.317 45.833 0.00 0.00 35.99 2.67
2105 2561 4.584743 TCACACTCTACCTATCGCATGATT 59.415 41.667 0.00 0.00 35.99 2.57
2106 2562 4.145052 TCACACTCTACCTATCGCATGAT 58.855 43.478 0.00 0.00 38.67 2.45
2107 2563 3.551846 TCACACTCTACCTATCGCATGA 58.448 45.455 0.00 0.00 0.00 3.07
2108 2564 3.565902 TCTCACACTCTACCTATCGCATG 59.434 47.826 0.00 0.00 0.00 4.06
2109 2565 3.818210 CTCTCACACTCTACCTATCGCAT 59.182 47.826 0.00 0.00 0.00 4.73
2110 2566 3.206964 CTCTCACACTCTACCTATCGCA 58.793 50.000 0.00 0.00 0.00 5.10
2111 2567 3.207778 ACTCTCACACTCTACCTATCGC 58.792 50.000 0.00 0.00 0.00 4.58
2112 2568 4.636648 ACAACTCTCACACTCTACCTATCG 59.363 45.833 0.00 0.00 0.00 2.92
2113 2569 5.648526 TCACAACTCTCACACTCTACCTATC 59.351 44.000 0.00 0.00 0.00 2.08
2114 2570 5.571285 TCACAACTCTCACACTCTACCTAT 58.429 41.667 0.00 0.00 0.00 2.57
2115 2571 4.981812 TCACAACTCTCACACTCTACCTA 58.018 43.478 0.00 0.00 0.00 3.08
2116 2572 3.823873 CTCACAACTCTCACACTCTACCT 59.176 47.826 0.00 0.00 0.00 3.08
2117 2573 3.821600 TCTCACAACTCTCACACTCTACC 59.178 47.826 0.00 0.00 0.00 3.18
2118 2574 4.083003 CCTCTCACAACTCTCACACTCTAC 60.083 50.000 0.00 0.00 0.00 2.59
2119 2575 4.075682 CCTCTCACAACTCTCACACTCTA 58.924 47.826 0.00 0.00 0.00 2.43
2120 2576 2.890311 CCTCTCACAACTCTCACACTCT 59.110 50.000 0.00 0.00 0.00 3.24
2121 2577 2.029470 CCCTCTCACAACTCTCACACTC 60.029 54.545 0.00 0.00 0.00 3.51
2122 2578 1.967066 CCCTCTCACAACTCTCACACT 59.033 52.381 0.00 0.00 0.00 3.55
2123 2579 1.964223 TCCCTCTCACAACTCTCACAC 59.036 52.381 0.00 0.00 0.00 3.82
2124 2580 2.381752 TCCCTCTCACAACTCTCACA 57.618 50.000 0.00 0.00 0.00 3.58
2125 2581 3.753294 TTTCCCTCTCACAACTCTCAC 57.247 47.619 0.00 0.00 0.00 3.51
2126 2582 4.771114 TTTTTCCCTCTCACAACTCTCA 57.229 40.909 0.00 0.00 0.00 3.27
2127 2583 6.147985 GTGTATTTTTCCCTCTCACAACTCTC 59.852 42.308 0.00 0.00 0.00 3.20
2128 2584 5.998363 GTGTATTTTTCCCTCTCACAACTCT 59.002 40.000 0.00 0.00 0.00 3.24
2129 2585 5.763204 TGTGTATTTTTCCCTCTCACAACTC 59.237 40.000 0.00 0.00 32.66 3.01
2130 2586 5.690865 TGTGTATTTTTCCCTCTCACAACT 58.309 37.500 0.00 0.00 32.66 3.16
2131 2587 6.385649 TTGTGTATTTTTCCCTCTCACAAC 57.614 37.500 0.00 0.00 38.69 3.32
2132 2588 7.411486 TTTTGTGTATTTTTCCCTCTCACAA 57.589 32.000 0.00 0.00 40.73 3.33
2133 2589 7.411486 TTTTTGTGTATTTTTCCCTCTCACA 57.589 32.000 0.00 0.00 33.53 3.58
2156 2612 4.170053 CCACCCTCCCCCTCTTATATTTTT 59.830 45.833 0.00 0.00 0.00 1.94
2157 2613 3.727391 CCACCCTCCCCCTCTTATATTTT 59.273 47.826 0.00 0.00 0.00 1.82
2158 2614 3.336676 CCACCCTCCCCCTCTTATATTT 58.663 50.000 0.00 0.00 0.00 1.40
2159 2615 2.430894 CCCACCCTCCCCCTCTTATATT 60.431 54.545 0.00 0.00 0.00 1.28
2160 2616 1.154434 CCCACCCTCCCCCTCTTATAT 59.846 57.143 0.00 0.00 0.00 0.86
2161 2617 0.571236 CCCACCCTCCCCCTCTTATA 59.429 60.000 0.00 0.00 0.00 0.98
2162 2618 1.243230 TCCCACCCTCCCCCTCTTAT 61.243 60.000 0.00 0.00 0.00 1.73
2163 2619 1.869946 TCCCACCCTCCCCCTCTTA 60.870 63.158 0.00 0.00 0.00 2.10
2164 2620 3.216371 TCCCACCCTCCCCCTCTT 61.216 66.667 0.00 0.00 0.00 2.85
2165 2621 3.700350 CTCCCACCCTCCCCCTCT 61.700 72.222 0.00 0.00 0.00 3.69
2166 2622 4.825679 CCTCCCACCCTCCCCCTC 62.826 77.778 0.00 0.00 0.00 4.30
2171 2627 4.825679 CTCCCCCTCCCACCCTCC 62.826 77.778 0.00 0.00 0.00 4.30
2183 2639 2.949705 GAAATGCCGAGGAGCTCCCC 62.950 65.000 29.54 17.73 36.42 4.81
2184 2640 1.524849 GAAATGCCGAGGAGCTCCC 60.525 63.158 29.54 18.91 36.42 4.30
2185 2641 0.179034 ATGAAATGCCGAGGAGCTCC 60.179 55.000 26.22 26.22 0.00 4.70
2186 2642 1.673168 AATGAAATGCCGAGGAGCTC 58.327 50.000 4.71 4.71 0.00 4.09
2187 2643 2.134789 AAATGAAATGCCGAGGAGCT 57.865 45.000 0.00 0.00 0.00 4.09
2188 2644 2.947448 AAAATGAAATGCCGAGGAGC 57.053 45.000 0.00 0.00 0.00 4.70
2189 2645 5.954335 AGTTTAAAATGAAATGCCGAGGAG 58.046 37.500 0.00 0.00 0.00 3.69
2190 2646 5.975693 AGTTTAAAATGAAATGCCGAGGA 57.024 34.783 0.00 0.00 0.00 3.71
2191 2647 6.747280 CACTAGTTTAAAATGAAATGCCGAGG 59.253 38.462 0.00 0.00 0.00 4.63
2192 2648 6.747280 CCACTAGTTTAAAATGAAATGCCGAG 59.253 38.462 0.00 0.00 0.00 4.63
2193 2649 6.207810 ACCACTAGTTTAAAATGAAATGCCGA 59.792 34.615 0.00 0.00 0.00 5.54
2194 2650 6.386654 ACCACTAGTTTAAAATGAAATGCCG 58.613 36.000 0.00 0.00 0.00 5.69
2195 2651 7.117667 CCAACCACTAGTTTAAAATGAAATGCC 59.882 37.037 0.00 0.00 36.18 4.40
2196 2652 7.117667 CCCAACCACTAGTTTAAAATGAAATGC 59.882 37.037 0.00 0.00 36.18 3.56
2197 2653 7.602265 CCCCAACCACTAGTTTAAAATGAAATG 59.398 37.037 0.00 0.00 36.18 2.32
2198 2654 7.676004 CCCCAACCACTAGTTTAAAATGAAAT 58.324 34.615 0.00 0.00 36.18 2.17
2199 2655 6.463190 GCCCCAACCACTAGTTTAAAATGAAA 60.463 38.462 0.00 0.00 36.18 2.69
2200 2656 5.011227 GCCCCAACCACTAGTTTAAAATGAA 59.989 40.000 0.00 0.00 36.18 2.57
2201 2657 4.525100 GCCCCAACCACTAGTTTAAAATGA 59.475 41.667 0.00 0.00 36.18 2.57
2202 2658 4.617298 CGCCCCAACCACTAGTTTAAAATG 60.617 45.833 0.00 0.00 36.18 2.32
2203 2659 3.508402 CGCCCCAACCACTAGTTTAAAAT 59.492 43.478 0.00 0.00 36.18 1.82
2204 2660 2.885894 CGCCCCAACCACTAGTTTAAAA 59.114 45.455 0.00 0.00 36.18 1.52
2205 2661 2.506444 CGCCCCAACCACTAGTTTAAA 58.494 47.619 0.00 0.00 36.18 1.52
2206 2662 1.883209 GCGCCCCAACCACTAGTTTAA 60.883 52.381 0.00 0.00 36.18 1.52
2207 2663 0.321830 GCGCCCCAACCACTAGTTTA 60.322 55.000 0.00 0.00 36.18 2.01
2208 2664 1.602605 GCGCCCCAACCACTAGTTT 60.603 57.895 0.00 0.00 36.18 2.66
2209 2665 2.033602 GCGCCCCAACCACTAGTT 59.966 61.111 0.00 0.00 40.16 2.24
2210 2666 4.029809 GGCGCCCCAACCACTAGT 62.030 66.667 18.11 0.00 0.00 2.57
2211 2667 4.028490 TGGCGCCCCAACCACTAG 62.028 66.667 26.77 0.00 38.46 2.57
2236 2692 3.191539 CTTCTTCTCAGGCGGCGC 61.192 66.667 26.17 26.17 0.00 6.53
2237 2693 3.191539 GCTTCTTCTCAGGCGGCG 61.192 66.667 0.51 0.51 0.00 6.46
2238 2694 2.105466 CAGCTTCTTCTCAGGCGGC 61.105 63.158 0.00 0.00 0.00 6.53
2239 2695 1.449246 CCAGCTTCTTCTCAGGCGG 60.449 63.158 0.00 0.00 0.00 6.13
2240 2696 1.449246 CCCAGCTTCTTCTCAGGCG 60.449 63.158 0.00 0.00 0.00 5.52
2241 2697 0.676151 CACCCAGCTTCTTCTCAGGC 60.676 60.000 0.00 0.00 0.00 4.85
2242 2698 0.689623 ACACCCAGCTTCTTCTCAGG 59.310 55.000 0.00 0.00 0.00 3.86
2243 2699 2.149578 CAACACCCAGCTTCTTCTCAG 58.850 52.381 0.00 0.00 0.00 3.35
2244 2700 1.815408 GCAACACCCAGCTTCTTCTCA 60.815 52.381 0.00 0.00 0.00 3.27
2245 2701 0.877743 GCAACACCCAGCTTCTTCTC 59.122 55.000 0.00 0.00 0.00 2.87
2246 2702 0.538287 GGCAACACCCAGCTTCTTCT 60.538 55.000 0.00 0.00 0.00 2.85
2247 2703 0.823356 TGGCAACACCCAGCTTCTTC 60.823 55.000 0.00 0.00 46.17 2.87
2248 2704 0.825010 CTGGCAACACCCAGCTTCTT 60.825 55.000 0.00 0.00 45.28 2.52
2249 2705 1.228367 CTGGCAACACCCAGCTTCT 60.228 57.895 0.00 0.00 45.28 2.85
2250 2706 3.359002 CTGGCAACACCCAGCTTC 58.641 61.111 0.00 0.00 45.28 3.86
2255 2711 1.462432 TCCTACCTGGCAACACCCA 60.462 57.895 0.00 0.00 46.17 4.51
2256 2712 1.299976 CTCCTACCTGGCAACACCC 59.700 63.158 0.00 0.00 46.17 4.61
2257 2713 1.299976 CCTCCTACCTGGCAACACC 59.700 63.158 0.00 0.00 46.17 4.16
2266 2722 4.499116 ATGGGGCGCCTCCTACCT 62.499 66.667 26.97 8.25 34.39 3.08
2267 2723 3.942439 GATGGGGCGCCTCCTACC 61.942 72.222 26.97 18.28 34.39 3.18
2268 2724 3.942439 GGATGGGGCGCCTCCTAC 61.942 72.222 26.97 12.10 34.39 3.18
2269 2725 4.490606 TGGATGGGGCGCCTCCTA 62.491 66.667 26.97 6.24 34.39 2.94
2272 2728 3.645268 AAAGTGGATGGGGCGCCTC 62.645 63.158 28.56 25.91 0.00 4.70
2273 2729 3.645268 GAAAGTGGATGGGGCGCCT 62.645 63.158 28.56 6.33 0.00 5.52
2274 2730 3.140814 GAAAGTGGATGGGGCGCC 61.141 66.667 21.18 21.18 0.00 6.53
2275 2731 3.140814 GGAAAGTGGATGGGGCGC 61.141 66.667 0.00 0.00 0.00 6.53
2276 2732 0.611896 AAAGGAAAGTGGATGGGGCG 60.612 55.000 0.00 0.00 0.00 6.13
2277 2733 1.644509 AAAAGGAAAGTGGATGGGGC 58.355 50.000 0.00 0.00 0.00 5.80
2278 2734 6.194967 ACTATAAAAAGGAAAGTGGATGGGG 58.805 40.000 0.00 0.00 0.00 4.96
2279 2735 8.850156 CATACTATAAAAAGGAAAGTGGATGGG 58.150 37.037 0.00 0.00 0.00 4.00
2280 2736 9.408648 ACATACTATAAAAAGGAAAGTGGATGG 57.591 33.333 0.00 0.00 0.00 3.51
2296 2752 9.135843 GCGTATGATGCAAACTACATACTATAA 57.864 33.333 18.92 0.00 41.28 0.98
2297 2753 8.520351 AGCGTATGATGCAAACTACATACTATA 58.480 33.333 18.92 0.00 41.28 1.31
2298 2754 7.378966 AGCGTATGATGCAAACTACATACTAT 58.621 34.615 18.92 10.89 41.28 2.12
2299 2755 6.745116 AGCGTATGATGCAAACTACATACTA 58.255 36.000 18.92 0.00 41.28 1.82
2300 2756 5.601662 AGCGTATGATGCAAACTACATACT 58.398 37.500 18.92 6.86 41.28 2.12
2301 2757 5.907197 AGCGTATGATGCAAACTACATAC 57.093 39.130 14.97 14.97 40.56 2.39
2302 2758 8.601845 AATAAGCGTATGATGCAAACTACATA 57.398 30.769 0.00 0.00 31.07 2.29
2303 2759 7.496529 AATAAGCGTATGATGCAAACTACAT 57.503 32.000 0.00 0.00 31.07 2.29
2304 2760 6.918892 AATAAGCGTATGATGCAAACTACA 57.081 33.333 0.00 0.00 31.07 2.74
2305 2761 7.530861 GCTTAATAAGCGTATGATGCAAACTAC 59.469 37.037 9.41 0.00 45.74 2.73
2306 2762 7.572759 GCTTAATAAGCGTATGATGCAAACTA 58.427 34.615 9.41 0.00 45.74 2.24
2307 2763 6.430451 GCTTAATAAGCGTATGATGCAAACT 58.570 36.000 9.41 0.00 45.74 2.66
2308 2764 6.660486 GCTTAATAAGCGTATGATGCAAAC 57.340 37.500 9.41 0.00 45.74 2.93
2333 2789 3.879892 CCTGGTTTATCCTAGCTTCTTGC 59.120 47.826 0.00 0.00 38.42 4.01
2334 2790 4.164221 TCCCTGGTTTATCCTAGCTTCTTG 59.836 45.833 0.00 0.00 37.07 3.02
2335 2791 4.371681 TCCCTGGTTTATCCTAGCTTCTT 58.628 43.478 0.00 0.00 37.07 2.52
2336 2792 4.008916 TCCCTGGTTTATCCTAGCTTCT 57.991 45.455 0.00 0.00 37.07 2.85
2337 2793 4.984146 ATCCCTGGTTTATCCTAGCTTC 57.016 45.455 0.00 0.00 37.07 3.86
2338 2794 5.193728 TGAAATCCCTGGTTTATCCTAGCTT 59.806 40.000 0.00 0.00 37.07 3.74
2339 2795 4.726825 TGAAATCCCTGGTTTATCCTAGCT 59.273 41.667 0.00 0.00 37.07 3.32
2340 2796 5.048846 TGAAATCCCTGGTTTATCCTAGC 57.951 43.478 0.00 0.00 37.07 3.42
2341 2797 8.605947 TGATATGAAATCCCTGGTTTATCCTAG 58.394 37.037 0.00 0.00 37.07 3.02
2342 2798 8.518720 TGATATGAAATCCCTGGTTTATCCTA 57.481 34.615 0.00 0.00 37.07 2.94
2343 2799 7.406620 TGATATGAAATCCCTGGTTTATCCT 57.593 36.000 0.00 0.00 37.07 3.24
2344 2800 7.890127 TGATGATATGAAATCCCTGGTTTATCC 59.110 37.037 0.00 0.00 0.00 2.59
2345 2801 8.868522 TGATGATATGAAATCCCTGGTTTATC 57.131 34.615 0.00 0.00 0.00 1.75
2346 2802 7.892241 CCTGATGATATGAAATCCCTGGTTTAT 59.108 37.037 0.00 0.00 0.00 1.40
2347 2803 7.073598 TCCTGATGATATGAAATCCCTGGTTTA 59.926 37.037 0.00 0.00 0.00 2.01
2348 2804 6.073314 CCTGATGATATGAAATCCCTGGTTT 58.927 40.000 0.00 0.00 0.00 3.27
2349 2805 5.373555 TCCTGATGATATGAAATCCCTGGTT 59.626 40.000 0.00 0.00 0.00 3.67
2350 2806 4.915809 TCCTGATGATATGAAATCCCTGGT 59.084 41.667 0.00 0.00 0.00 4.00
2351 2807 5.509832 TCCTGATGATATGAAATCCCTGG 57.490 43.478 0.00 0.00 0.00 4.45
2352 2808 6.301486 TGTTCCTGATGATATGAAATCCCTG 58.699 40.000 0.00 0.00 0.00 4.45
2353 2809 6.520021 TGTTCCTGATGATATGAAATCCCT 57.480 37.500 0.00 0.00 0.00 4.20
2354 2810 7.587037 TTTGTTCCTGATGATATGAAATCCC 57.413 36.000 0.00 0.00 0.00 3.85
2361 2817 9.865321 ACTTTCAATTTTGTTCCTGATGATATG 57.135 29.630 0.00 0.00 0.00 1.78
2363 2819 9.912634 GAACTTTCAATTTTGTTCCTGATGATA 57.087 29.630 0.00 0.00 34.47 2.15
2364 2820 8.423349 TGAACTTTCAATTTTGTTCCTGATGAT 58.577 29.630 0.00 0.00 38.29 2.45
2365 2821 7.780064 TGAACTTTCAATTTTGTTCCTGATGA 58.220 30.769 0.00 0.00 38.29 2.92
2366 2822 8.597662 ATGAACTTTCAATTTTGTTCCTGATG 57.402 30.769 0.00 0.00 41.13 3.07
2368 2824 9.528018 GTAATGAACTTTCAATTTTGTTCCTGA 57.472 29.630 0.00 0.00 41.13 3.86
2369 2825 9.311916 TGTAATGAACTTTCAATTTTGTTCCTG 57.688 29.630 0.00 0.00 41.13 3.86
2370 2826 9.313118 GTGTAATGAACTTTCAATTTTGTTCCT 57.687 29.630 0.00 0.00 41.13 3.36
2371 2827 9.092876 TGTGTAATGAACTTTCAATTTTGTTCC 57.907 29.630 0.00 0.00 41.13 3.62
2379 2835 9.426837 CCATCAAATGTGTAATGAACTTTCAAT 57.573 29.630 0.00 0.00 41.13 2.57
2380 2836 8.637099 TCCATCAAATGTGTAATGAACTTTCAA 58.363 29.630 0.00 0.00 41.13 2.69
2381 2837 8.175925 TCCATCAAATGTGTAATGAACTTTCA 57.824 30.769 0.00 0.00 42.14 2.69
2382 2838 9.474920 TTTCCATCAAATGTGTAATGAACTTTC 57.525 29.630 0.00 0.00 0.00 2.62
2383 2839 9.829507 TTTTCCATCAAATGTGTAATGAACTTT 57.170 25.926 0.00 0.00 0.00 2.66
2384 2840 9.480053 CTTTTCCATCAAATGTGTAATGAACTT 57.520 29.630 0.00 0.00 0.00 2.66
2385 2841 8.641541 ACTTTTCCATCAAATGTGTAATGAACT 58.358 29.630 0.00 0.00 32.48 3.01
2386 2842 8.702438 CACTTTTCCATCAAATGTGTAATGAAC 58.298 33.333 5.40 0.00 41.80 3.18
2387 2843 8.637099 TCACTTTTCCATCAAATGTGTAATGAA 58.363 29.630 10.94 0.00 44.74 2.57
2388 2844 8.081633 GTCACTTTTCCATCAAATGTGTAATGA 58.918 33.333 10.94 0.00 44.74 2.57
2389 2845 7.866898 TGTCACTTTTCCATCAAATGTGTAATG 59.133 33.333 10.94 0.00 44.74 1.90
2390 2846 7.867403 GTGTCACTTTTCCATCAAATGTGTAAT 59.133 33.333 10.94 0.00 44.74 1.89
2391 2847 7.148000 TGTGTCACTTTTCCATCAAATGTGTAA 60.148 33.333 4.27 2.02 44.74 2.41
2392 2848 6.319911 TGTGTCACTTTTCCATCAAATGTGTA 59.680 34.615 4.27 2.84 44.74 2.90
2393 2849 5.126869 TGTGTCACTTTTCCATCAAATGTGT 59.873 36.000 4.27 0.00 44.74 3.72
2394 2850 5.590145 TGTGTCACTTTTCCATCAAATGTG 58.410 37.500 4.27 6.72 45.35 3.21
2395 2851 5.850557 TGTGTCACTTTTCCATCAAATGT 57.149 34.783 4.27 0.00 33.63 2.71
2396 2852 5.119588 GCATGTGTCACTTTTCCATCAAATG 59.880 40.000 4.27 0.00 0.00 2.32
2397 2853 5.221481 TGCATGTGTCACTTTTCCATCAAAT 60.221 36.000 4.27 0.00 0.00 2.32
2398 2854 4.099113 TGCATGTGTCACTTTTCCATCAAA 59.901 37.500 4.27 0.00 0.00 2.69
2399 2855 3.635836 TGCATGTGTCACTTTTCCATCAA 59.364 39.130 4.27 0.00 0.00 2.57
2400 2856 3.220940 TGCATGTGTCACTTTTCCATCA 58.779 40.909 4.27 0.00 0.00 3.07
2401 2857 3.921119 TGCATGTGTCACTTTTCCATC 57.079 42.857 4.27 0.00 0.00 3.51
2402 2858 4.084287 AGATGCATGTGTCACTTTTCCAT 58.916 39.130 2.46 1.19 0.00 3.41
2403 2859 3.489355 AGATGCATGTGTCACTTTTCCA 58.511 40.909 2.46 0.00 0.00 3.53
2404 2860 4.232221 CAAGATGCATGTGTCACTTTTCC 58.768 43.478 2.46 0.00 0.00 3.13
2405 2861 4.232221 CCAAGATGCATGTGTCACTTTTC 58.768 43.478 2.46 0.00 0.00 2.29
2406 2862 3.553508 GCCAAGATGCATGTGTCACTTTT 60.554 43.478 2.46 0.00 0.00 2.27
2407 2863 2.029649 GCCAAGATGCATGTGTCACTTT 60.030 45.455 2.46 0.00 0.00 2.66
2408 2864 1.542915 GCCAAGATGCATGTGTCACTT 59.457 47.619 2.46 0.00 0.00 3.16
2409 2865 1.171308 GCCAAGATGCATGTGTCACT 58.829 50.000 2.46 0.00 0.00 3.41
2410 2866 1.131883 GAGCCAAGATGCATGTGTCAC 59.868 52.381 2.46 0.00 0.00 3.67
2411 2867 1.003928 AGAGCCAAGATGCATGTGTCA 59.996 47.619 2.46 0.00 0.00 3.58
2412 2868 1.747709 AGAGCCAAGATGCATGTGTC 58.252 50.000 2.46 0.00 0.00 3.67
2413 2869 3.012518 GTTAGAGCCAAGATGCATGTGT 58.987 45.455 2.46 0.00 0.00 3.72
2414 2870 3.011818 TGTTAGAGCCAAGATGCATGTG 58.988 45.455 2.46 1.36 0.00 3.21
2415 2871 3.354948 TGTTAGAGCCAAGATGCATGT 57.645 42.857 2.46 0.00 0.00 3.21
2416 2872 3.881089 TGATGTTAGAGCCAAGATGCATG 59.119 43.478 2.46 0.00 0.00 4.06
2417 2873 3.881688 GTGATGTTAGAGCCAAGATGCAT 59.118 43.478 0.00 0.00 0.00 3.96
2418 2874 3.273434 GTGATGTTAGAGCCAAGATGCA 58.727 45.455 0.00 0.00 0.00 3.96
2419 2875 3.273434 TGTGATGTTAGAGCCAAGATGC 58.727 45.455 0.00 0.00 0.00 3.91
2420 2876 5.587443 TCAATGTGATGTTAGAGCCAAGATG 59.413 40.000 0.00 0.00 0.00 2.90
2421 2877 5.748402 TCAATGTGATGTTAGAGCCAAGAT 58.252 37.500 0.00 0.00 0.00 2.40
2422 2878 5.164620 TCAATGTGATGTTAGAGCCAAGA 57.835 39.130 0.00 0.00 0.00 3.02
2423 2879 7.558161 TTATCAATGTGATGTTAGAGCCAAG 57.442 36.000 0.94 0.00 37.70 3.61
2424 2880 7.828717 TCTTTATCAATGTGATGTTAGAGCCAA 59.171 33.333 0.94 0.00 37.70 4.52
2425 2881 7.337938 TCTTTATCAATGTGATGTTAGAGCCA 58.662 34.615 0.94 0.00 37.70 4.75
2426 2882 7.497249 ACTCTTTATCAATGTGATGTTAGAGCC 59.503 37.037 17.14 0.00 38.76 4.70
2427 2883 8.430801 ACTCTTTATCAATGTGATGTTAGAGC 57.569 34.615 17.14 0.00 38.76 4.09
2432 2888 9.725019 TTCAGTACTCTTTATCAATGTGATGTT 57.275 29.630 0.00 0.00 37.70 2.71
2433 2889 9.725019 TTTCAGTACTCTTTATCAATGTGATGT 57.275 29.630 0.00 0.00 37.70 3.06
2444 2900 9.890629 TGTGCAGATTATTTCAGTACTCTTTAT 57.109 29.630 0.00 0.00 29.64 1.40
2445 2901 9.719355 TTGTGCAGATTATTTCAGTACTCTTTA 57.281 29.630 0.00 0.00 29.64 1.85
2446 2902 8.621532 TTGTGCAGATTATTTCAGTACTCTTT 57.378 30.769 0.00 0.00 29.64 2.52
2447 2903 8.621532 TTTGTGCAGATTATTTCAGTACTCTT 57.378 30.769 0.00 0.00 29.64 2.85
2448 2904 8.621532 TTTTGTGCAGATTATTTCAGTACTCT 57.378 30.769 0.00 0.00 29.64 3.24
2449 2905 9.118236 GTTTTTGTGCAGATTATTTCAGTACTC 57.882 33.333 0.00 0.00 29.64 2.59
2450 2906 8.629158 TGTTTTTGTGCAGATTATTTCAGTACT 58.371 29.630 0.00 0.00 29.64 2.73
2451 2907 8.795786 TGTTTTTGTGCAGATTATTTCAGTAC 57.204 30.769 0.00 0.00 0.00 2.73
2452 2908 9.462174 CTTGTTTTTGTGCAGATTATTTCAGTA 57.538 29.630 0.00 0.00 0.00 2.74
2453 2909 7.439056 CCTTGTTTTTGTGCAGATTATTTCAGT 59.561 33.333 0.00 0.00 0.00 3.41
2454 2910 7.652909 TCCTTGTTTTTGTGCAGATTATTTCAG 59.347 33.333 0.00 0.00 0.00 3.02
2455 2911 7.437862 GTCCTTGTTTTTGTGCAGATTATTTCA 59.562 33.333 0.00 0.00 0.00 2.69
2456 2912 7.437862 TGTCCTTGTTTTTGTGCAGATTATTTC 59.562 33.333 0.00 0.00 0.00 2.17
2457 2913 7.271511 TGTCCTTGTTTTTGTGCAGATTATTT 58.728 30.769 0.00 0.00 0.00 1.40
2458 2914 6.815089 TGTCCTTGTTTTTGTGCAGATTATT 58.185 32.000 0.00 0.00 0.00 1.40
2459 2915 6.403866 TGTCCTTGTTTTTGTGCAGATTAT 57.596 33.333 0.00 0.00 0.00 1.28
2460 2916 5.843673 TGTCCTTGTTTTTGTGCAGATTA 57.156 34.783 0.00 0.00 0.00 1.75
2461 2917 4.734398 TGTCCTTGTTTTTGTGCAGATT 57.266 36.364 0.00 0.00 0.00 2.40
2462 2918 4.734398 TTGTCCTTGTTTTTGTGCAGAT 57.266 36.364 0.00 0.00 0.00 2.90
2463 2919 4.527509 TTTGTCCTTGTTTTTGTGCAGA 57.472 36.364 0.00 0.00 0.00 4.26
2464 2920 5.049818 TGTTTTTGTCCTTGTTTTTGTGCAG 60.050 36.000 0.00 0.00 0.00 4.41
2465 2921 4.816385 TGTTTTTGTCCTTGTTTTTGTGCA 59.184 33.333 0.00 0.00 0.00 4.57
2466 2922 5.049749 AGTGTTTTTGTCCTTGTTTTTGTGC 60.050 36.000 0.00 0.00 0.00 4.57
2467 2923 6.201806 TCAGTGTTTTTGTCCTTGTTTTTGTG 59.798 34.615 0.00 0.00 0.00 3.33
2468 2924 6.284459 TCAGTGTTTTTGTCCTTGTTTTTGT 58.716 32.000 0.00 0.00 0.00 2.83
2469 2925 6.618379 GCTCAGTGTTTTTGTCCTTGTTTTTG 60.618 38.462 0.00 0.00 0.00 2.44
2470 2926 5.408299 GCTCAGTGTTTTTGTCCTTGTTTTT 59.592 36.000 0.00 0.00 0.00 1.94
2471 2927 4.929211 GCTCAGTGTTTTTGTCCTTGTTTT 59.071 37.500 0.00 0.00 0.00 2.43
2472 2928 4.494484 GCTCAGTGTTTTTGTCCTTGTTT 58.506 39.130 0.00 0.00 0.00 2.83
2473 2929 3.427503 CGCTCAGTGTTTTTGTCCTTGTT 60.428 43.478 0.00 0.00 0.00 2.83
2474 2930 2.097466 CGCTCAGTGTTTTTGTCCTTGT 59.903 45.455 0.00 0.00 0.00 3.16
2475 2931 2.097466 ACGCTCAGTGTTTTTGTCCTTG 59.903 45.455 0.00 0.00 0.00 3.61
2476 2932 2.097466 CACGCTCAGTGTTTTTGTCCTT 59.903 45.455 0.00 0.00 45.51 3.36
2477 2933 1.670811 CACGCTCAGTGTTTTTGTCCT 59.329 47.619 0.00 0.00 45.51 3.85
2478 2934 2.105323 CACGCTCAGTGTTTTTGTCC 57.895 50.000 0.00 0.00 45.51 4.02
2488 2944 1.593787 CACTCCATCCACGCTCAGT 59.406 57.895 0.00 0.00 0.00 3.41
2489 2945 1.153489 CCACTCCATCCACGCTCAG 60.153 63.158 0.00 0.00 0.00 3.35
2490 2946 2.981302 CCACTCCATCCACGCTCA 59.019 61.111 0.00 0.00 0.00 4.26
2491 2947 2.512515 GCCACTCCATCCACGCTC 60.513 66.667 0.00 0.00 0.00 5.03
2492 2948 3.005539 AGCCACTCCATCCACGCT 61.006 61.111 0.00 0.00 0.00 5.07
2493 2949 2.599645 ATCAGCCACTCCATCCACGC 62.600 60.000 0.00 0.00 0.00 5.34
2494 2950 0.531532 GATCAGCCACTCCATCCACG 60.532 60.000 0.00 0.00 0.00 4.94
2495 2951 0.835941 AGATCAGCCACTCCATCCAC 59.164 55.000 0.00 0.00 0.00 4.02
2496 2952 1.487976 GAAGATCAGCCACTCCATCCA 59.512 52.381 0.00 0.00 0.00 3.41
2497 2953 1.487976 TGAAGATCAGCCACTCCATCC 59.512 52.381 0.00 0.00 0.00 3.51
2498 2954 2.559440 GTGAAGATCAGCCACTCCATC 58.441 52.381 0.00 0.00 0.00 3.51
2499 2955 1.211457 GGTGAAGATCAGCCACTCCAT 59.789 52.381 10.52 0.00 38.84 3.41
2500 2956 0.615331 GGTGAAGATCAGCCACTCCA 59.385 55.000 10.52 0.00 38.84 3.86
2501 2957 0.908198 AGGTGAAGATCAGCCACTCC 59.092 55.000 5.97 0.00 45.34 3.85
2502 2958 1.470632 CGAGGTGAAGATCAGCCACTC 60.471 57.143 5.97 4.94 45.34 3.51
2503 2959 0.534412 CGAGGTGAAGATCAGCCACT 59.466 55.000 5.97 0.00 45.34 4.00
2504 2960 0.532573 TCGAGGTGAAGATCAGCCAC 59.467 55.000 5.97 0.00 45.34 5.01
2505 2961 0.820226 CTCGAGGTGAAGATCAGCCA 59.180 55.000 3.91 0.00 45.34 4.75
2506 2962 0.529555 GCTCGAGGTGAAGATCAGCC 60.530 60.000 15.58 0.00 45.34 4.85
2507 2963 0.459489 AGCTCGAGGTGAAGATCAGC 59.541 55.000 17.85 1.46 44.62 4.26
2508 2964 1.747924 TGAGCTCGAGGTGAAGATCAG 59.252 52.381 23.97 0.00 0.00 2.90
2509 2965 1.839424 TGAGCTCGAGGTGAAGATCA 58.161 50.000 23.97 9.67 0.00 2.92
2510 2966 2.949451 TTGAGCTCGAGGTGAAGATC 57.051 50.000 23.97 6.84 0.00 2.75
2511 2967 2.741228 GCATTGAGCTCGAGGTGAAGAT 60.741 50.000 23.97 2.62 41.15 2.40
2512 2968 1.404717 GCATTGAGCTCGAGGTGAAGA 60.405 52.381 23.97 0.00 41.15 2.87
2513 2969 1.005340 GCATTGAGCTCGAGGTGAAG 58.995 55.000 23.97 14.17 41.15 3.02
2514 2970 0.321346 TGCATTGAGCTCGAGGTGAA 59.679 50.000 23.97 21.03 45.94 3.18
2515 2971 0.538584 ATGCATTGAGCTCGAGGTGA 59.461 50.000 23.97 11.63 45.94 4.02
2516 2972 0.935898 GATGCATTGAGCTCGAGGTG 59.064 55.000 23.97 8.67 45.94 4.00
2517 2973 0.179062 GGATGCATTGAGCTCGAGGT 60.179 55.000 18.67 18.67 45.94 3.85
2518 2974 0.179065 TGGATGCATTGAGCTCGAGG 60.179 55.000 15.58 11.38 45.94 4.63
2519 2975 0.935898 GTGGATGCATTGAGCTCGAG 59.064 55.000 8.45 8.45 45.94 4.04
2520 2976 0.538584 AGTGGATGCATTGAGCTCGA 59.461 50.000 6.01 6.01 45.94 4.04
2521 2977 1.063616 CAAGTGGATGCATTGAGCTCG 59.936 52.381 9.64 0.00 45.94 5.03
2522 2978 1.202268 GCAAGTGGATGCATTGAGCTC 60.202 52.381 6.82 6.82 45.70 4.09
2523 2979 0.815734 GCAAGTGGATGCATTGAGCT 59.184 50.000 0.00 0.00 45.70 4.09
2524 2980 3.340727 GCAAGTGGATGCATTGAGC 57.659 52.632 0.00 3.41 45.70 4.26
2543 2999 1.482182 TGGCTCTAACATCGCACTGAT 59.518 47.619 0.00 0.00 38.01 2.90
2544 3000 0.894835 TGGCTCTAACATCGCACTGA 59.105 50.000 0.00 0.00 0.00 3.41
2545 3001 1.284657 CTGGCTCTAACATCGCACTG 58.715 55.000 0.00 0.00 0.00 3.66
2546 3002 0.898320 ACTGGCTCTAACATCGCACT 59.102 50.000 0.00 0.00 0.00 4.40
2547 3003 1.134965 AGACTGGCTCTAACATCGCAC 60.135 52.381 0.00 0.00 0.00 5.34
2548 3004 1.186200 AGACTGGCTCTAACATCGCA 58.814 50.000 0.00 0.00 0.00 5.10
2549 3005 2.197577 GAAGACTGGCTCTAACATCGC 58.802 52.381 0.00 0.00 0.00 4.58
2550 3006 2.455032 CGAAGACTGGCTCTAACATCG 58.545 52.381 0.00 0.00 0.00 3.84
2551 3007 2.197577 GCGAAGACTGGCTCTAACATC 58.802 52.381 0.00 0.00 0.00 3.06
2552 3008 1.134670 GGCGAAGACTGGCTCTAACAT 60.135 52.381 0.00 0.00 0.00 2.71
2553 3009 0.246635 GGCGAAGACTGGCTCTAACA 59.753 55.000 0.00 0.00 0.00 2.41
2554 3010 0.802607 CGGCGAAGACTGGCTCTAAC 60.803 60.000 0.00 0.00 0.00 2.34
2555 3011 1.248785 ACGGCGAAGACTGGCTCTAA 61.249 55.000 16.62 0.00 0.00 2.10
2556 3012 1.248785 AACGGCGAAGACTGGCTCTA 61.249 55.000 16.62 0.00 0.00 2.43
2557 3013 2.574955 AACGGCGAAGACTGGCTCT 61.575 57.895 16.62 0.00 0.00 4.09
2558 3014 2.048127 AACGGCGAAGACTGGCTC 60.048 61.111 16.62 0.00 0.00 4.70
2559 3015 2.357517 CAACGGCGAAGACTGGCT 60.358 61.111 16.62 0.00 0.00 4.75
2560 3016 4.090057 GCAACGGCGAAGACTGGC 62.090 66.667 16.62 0.00 0.00 4.85
2561 3017 3.423154 GGCAACGGCGAAGACTGG 61.423 66.667 16.62 0.00 42.47 4.00
2573 3029 4.957759 AGATACATTGTTTACCGGCAAC 57.042 40.909 0.00 5.65 0.00 4.17
2574 3030 5.968528 AAAGATACATTGTTTACCGGCAA 57.031 34.783 0.00 0.00 0.00 4.52
2575 3031 5.968528 AAAAGATACATTGTTTACCGGCA 57.031 34.783 0.00 0.00 0.00 5.69
2576 3032 6.383415 TCAAAAAGATACATTGTTTACCGGC 58.617 36.000 0.00 0.00 0.00 6.13
2577 3033 6.526674 GCTCAAAAAGATACATTGTTTACCGG 59.473 38.462 0.00 0.00 0.00 5.28
2578 3034 7.492614 GCTCAAAAAGATACATTGTTTACCG 57.507 36.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.