Multiple sequence alignment - TraesCS5D01G507500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G507500 chr5D 100.000 2564 0 0 1 2564 532746208 532743645 0.000000e+00 4735.0
1 TraesCS5D01G507500 chr5D 92.368 642 23 11 1023 1646 532819799 532819166 0.000000e+00 891.0
2 TraesCS5D01G507500 chr5D 83.438 634 65 27 964 1567 533006133 533005510 1.040000e-153 553.0
3 TraesCS5D01G507500 chr5D 91.202 341 28 2 1223 1562 533000573 533000234 1.800000e-126 462.0
4 TraesCS5D01G507500 chr5D 86.006 343 23 8 466 802 532820346 532820023 6.790000e-91 344.0
5 TraesCS5D01G507500 chr5D 96.364 110 4 0 97 206 532754658 532754767 5.640000e-42 182.0
6 TraesCS5D01G507500 chr5D 86.000 150 10 5 962 1110 533000732 533000593 1.590000e-32 150.0
7 TraesCS5D01G507500 chr5D 100.000 60 0 0 803 862 532745345 532745286 7.500000e-21 111.0
8 TraesCS5D01G507500 chr5D 100.000 60 0 0 864 923 532745406 532745347 7.500000e-21 111.0
9 TraesCS5D01G507500 chr5D 87.013 77 10 0 2460 2536 532805416 532805340 1.260000e-13 87.9
10 TraesCS5D01G507500 chr5B 91.496 929 49 11 1023 1924 672865703 672864778 0.000000e+00 1251.0
11 TraesCS5D01G507500 chr5B 90.549 455 30 4 409 863 672866295 672865854 7.900000e-165 590.0
12 TraesCS5D01G507500 chr5B 81.818 737 74 36 855 1562 673036536 673035831 4.790000e-157 564.0
13 TraesCS5D01G507500 chr5B 92.669 341 20 3 1223 1562 672953676 672953340 1.070000e-133 486.0
14 TraesCS5D01G507500 chr5B 88.636 264 27 3 1919 2179 672862205 672861942 4.120000e-83 318.0
15 TraesCS5D01G507500 chr5B 89.041 219 7 1 210 411 672866640 672866422 3.270000e-64 255.0
16 TraesCS5D01G507500 chr5B 92.308 91 7 0 2282 2372 672859138 672859048 2.070000e-26 130.0
17 TraesCS5D01G507500 chr5B 89.286 56 6 0 2242 2297 672859207 672859152 1.270000e-08 71.3
18 TraesCS5D01G507500 chr4A 87.808 812 44 29 865 1646 639055350 639056136 0.000000e+00 900.0
19 TraesCS5D01G507500 chr4A 87.521 585 53 11 1723 2288 639056322 639056905 0.000000e+00 658.0
20 TraesCS5D01G507500 chr4A 84.665 626 63 18 964 1567 639041215 639041829 6.110000e-166 593.0
21 TraesCS5D01G507500 chr4A 84.665 626 63 18 964 1567 639043092 639043706 6.110000e-166 593.0
22 TraesCS5D01G507500 chr4A 91.086 359 30 2 1205 1562 639048445 639048802 3.840000e-133 484.0
23 TraesCS5D01G507500 chr4A 81.443 388 24 17 224 567 639054623 639055006 9.040000e-70 274.0
24 TraesCS5D01G507500 chr4A 91.045 134 8 1 725 858 639055275 639055404 7.290000e-41 178.0
25 TraesCS5D01G507500 chr4A 86.667 150 9 6 962 1110 639048304 639048443 3.420000e-34 156.0
26 TraesCS5D01G507500 chr7D 99.522 209 1 0 1 209 19556193 19555985 5.180000e-102 381.0
27 TraesCS5D01G507500 chr7D 97.273 110 3 0 97 206 19559851 19559960 1.210000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G507500 chr5D 532743645 532746208 2563 True 1652.333333 4735 100.000000 1 2564 3 chr5D.!!$R3 2563
1 TraesCS5D01G507500 chr5D 532819166 532820346 1180 True 617.500000 891 89.187000 466 1646 2 chr5D.!!$R4 1180
2 TraesCS5D01G507500 chr5D 533005510 533006133 623 True 553.000000 553 83.438000 964 1567 1 chr5D.!!$R2 603
3 TraesCS5D01G507500 chr5B 673035831 673036536 705 True 564.000000 564 81.818000 855 1562 1 chr5B.!!$R2 707
4 TraesCS5D01G507500 chr5B 672859048 672866640 7592 True 435.883333 1251 90.219333 210 2372 6 chr5B.!!$R3 2162
5 TraesCS5D01G507500 chr4A 639041215 639043706 2491 False 593.000000 593 84.665000 964 1567 2 chr4A.!!$F1 603
6 TraesCS5D01G507500 chr4A 639054623 639056905 2282 False 502.500000 900 86.954250 224 2288 4 chr4A.!!$F3 2064

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
930 1284 0.034089 ACAACAGCTAGCCCATTCCC 60.034 55.0 12.13 0.0 0.0 3.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2448 10208 0.098728 CACGGCGCCTAAAAGATTGG 59.901 55.0 26.68 7.01 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.557290 GAGGGGACGGTATGGCCC 61.557 72.222 0.00 0.00 41.28 5.80
18 19 4.424867 AGGGGACGGTATGGCCCA 62.425 66.667 8.34 0.00 43.89 5.36
19 20 3.873812 GGGGACGGTATGGCCCAG 61.874 72.222 8.34 0.00 43.89 4.45
20 21 2.766651 GGGACGGTATGGCCCAGA 60.767 66.667 0.00 0.00 41.64 3.86
21 22 2.808206 GGGACGGTATGGCCCAGAG 61.808 68.421 0.00 0.00 41.64 3.35
22 23 1.760875 GGACGGTATGGCCCAGAGA 60.761 63.158 0.00 0.00 0.00 3.10
23 24 1.122019 GGACGGTATGGCCCAGAGAT 61.122 60.000 0.00 0.00 0.00 2.75
24 25 0.318762 GACGGTATGGCCCAGAGATC 59.681 60.000 0.00 0.00 0.00 2.75
25 26 1.290324 CGGTATGGCCCAGAGATCG 59.710 63.158 0.00 0.00 0.00 3.69
26 27 1.674057 GGTATGGCCCAGAGATCGG 59.326 63.158 0.00 0.00 0.00 4.18
27 28 1.122019 GGTATGGCCCAGAGATCGGT 61.122 60.000 0.00 0.00 0.00 4.69
28 29 0.318762 GTATGGCCCAGAGATCGGTC 59.681 60.000 0.00 0.00 0.00 4.79
29 30 0.832135 TATGGCCCAGAGATCGGTCC 60.832 60.000 0.00 0.00 0.00 4.46
30 31 2.764128 GGCCCAGAGATCGGTCCA 60.764 66.667 0.00 0.00 0.00 4.02
31 32 2.801631 GGCCCAGAGATCGGTCCAG 61.802 68.421 0.00 0.00 0.00 3.86
32 33 1.758514 GCCCAGAGATCGGTCCAGA 60.759 63.158 0.00 0.00 0.00 3.86
33 34 1.118356 GCCCAGAGATCGGTCCAGAT 61.118 60.000 0.00 0.00 0.00 2.90
34 35 1.418334 CCCAGAGATCGGTCCAGATT 58.582 55.000 0.00 0.00 0.00 2.40
35 36 1.069823 CCCAGAGATCGGTCCAGATTG 59.930 57.143 0.00 0.00 0.00 2.67
36 37 1.759445 CCAGAGATCGGTCCAGATTGT 59.241 52.381 0.00 0.00 0.00 2.71
37 38 2.482664 CCAGAGATCGGTCCAGATTGTG 60.483 54.545 0.00 0.00 0.00 3.33
38 39 2.428530 CAGAGATCGGTCCAGATTGTGA 59.571 50.000 0.00 0.00 0.00 3.58
39 40 3.069300 CAGAGATCGGTCCAGATTGTGAT 59.931 47.826 0.00 0.00 0.00 3.06
40 41 3.069300 AGAGATCGGTCCAGATTGTGATG 59.931 47.826 0.00 0.00 0.00 3.07
41 42 3.033909 AGATCGGTCCAGATTGTGATGA 58.966 45.455 0.00 0.00 0.00 2.92
42 43 3.645212 AGATCGGTCCAGATTGTGATGAT 59.355 43.478 0.00 0.00 0.00 2.45
43 44 3.912496 TCGGTCCAGATTGTGATGATT 57.088 42.857 0.00 0.00 0.00 2.57
44 45 4.220693 TCGGTCCAGATTGTGATGATTT 57.779 40.909 0.00 0.00 0.00 2.17
45 46 4.191544 TCGGTCCAGATTGTGATGATTTC 58.808 43.478 0.00 0.00 0.00 2.17
46 47 3.313526 CGGTCCAGATTGTGATGATTTCC 59.686 47.826 0.00 0.00 0.00 3.13
47 48 4.530875 GGTCCAGATTGTGATGATTTCCT 58.469 43.478 0.00 0.00 0.00 3.36
48 49 4.578105 GGTCCAGATTGTGATGATTTCCTC 59.422 45.833 0.00 0.00 0.00 3.71
49 50 5.435291 GTCCAGATTGTGATGATTTCCTCT 58.565 41.667 0.00 0.00 0.00 3.69
50 51 5.526846 GTCCAGATTGTGATGATTTCCTCTC 59.473 44.000 0.00 0.00 0.00 3.20
51 52 4.820716 CCAGATTGTGATGATTTCCTCTCC 59.179 45.833 0.00 0.00 0.00 3.71
52 53 5.434408 CAGATTGTGATGATTTCCTCTCCA 58.566 41.667 0.00 0.00 0.00 3.86
53 54 6.062749 CAGATTGTGATGATTTCCTCTCCAT 58.937 40.000 0.00 0.00 0.00 3.41
54 55 7.222161 CAGATTGTGATGATTTCCTCTCCATA 58.778 38.462 0.00 0.00 0.00 2.74
55 56 7.883833 CAGATTGTGATGATTTCCTCTCCATAT 59.116 37.037 0.00 0.00 0.00 1.78
56 57 8.102047 AGATTGTGATGATTTCCTCTCCATATC 58.898 37.037 0.00 0.00 0.00 1.63
57 58 6.119240 TGTGATGATTTCCTCTCCATATCC 57.881 41.667 0.00 0.00 0.00 2.59
58 59 5.013495 TGTGATGATTTCCTCTCCATATCCC 59.987 44.000 0.00 0.00 0.00 3.85
59 60 5.250313 GTGATGATTTCCTCTCCATATCCCT 59.750 44.000 0.00 0.00 0.00 4.20
60 61 5.250082 TGATGATTTCCTCTCCATATCCCTG 59.750 44.000 0.00 0.00 0.00 4.45
61 62 3.328931 TGATTTCCTCTCCATATCCCTGC 59.671 47.826 0.00 0.00 0.00 4.85
62 63 1.734655 TTCCTCTCCATATCCCTGCC 58.265 55.000 0.00 0.00 0.00 4.85
63 64 0.567687 TCCTCTCCATATCCCTGCCA 59.432 55.000 0.00 0.00 0.00 4.92
64 65 1.061424 TCCTCTCCATATCCCTGCCAA 60.061 52.381 0.00 0.00 0.00 4.52
65 66 1.350351 CCTCTCCATATCCCTGCCAAG 59.650 57.143 0.00 0.00 0.00 3.61
66 67 2.053244 CTCTCCATATCCCTGCCAAGT 58.947 52.381 0.00 0.00 0.00 3.16
67 68 3.242867 CTCTCCATATCCCTGCCAAGTA 58.757 50.000 0.00 0.00 0.00 2.24
68 69 3.648067 CTCTCCATATCCCTGCCAAGTAA 59.352 47.826 0.00 0.00 0.00 2.24
69 70 3.648067 TCTCCATATCCCTGCCAAGTAAG 59.352 47.826 0.00 0.00 0.00 2.34
70 71 2.106511 TCCATATCCCTGCCAAGTAAGC 59.893 50.000 0.00 0.00 0.00 3.09
71 72 2.158623 CCATATCCCTGCCAAGTAAGCA 60.159 50.000 0.00 0.00 38.82 3.91
72 73 3.554934 CATATCCCTGCCAAGTAAGCAA 58.445 45.455 0.00 0.00 40.35 3.91
73 74 2.834638 ATCCCTGCCAAGTAAGCAAT 57.165 45.000 0.00 0.00 40.35 3.56
74 75 2.128771 TCCCTGCCAAGTAAGCAATC 57.871 50.000 0.00 0.00 40.35 2.67
75 76 1.106285 CCCTGCCAAGTAAGCAATCC 58.894 55.000 0.00 0.00 40.35 3.01
76 77 1.106285 CCTGCCAAGTAAGCAATCCC 58.894 55.000 0.00 0.00 40.35 3.85
77 78 1.616725 CCTGCCAAGTAAGCAATCCCA 60.617 52.381 0.00 0.00 40.35 4.37
78 79 2.381911 CTGCCAAGTAAGCAATCCCAT 58.618 47.619 0.00 0.00 40.35 4.00
79 80 2.762327 CTGCCAAGTAAGCAATCCCATT 59.238 45.455 0.00 0.00 40.35 3.16
80 81 2.760092 TGCCAAGTAAGCAATCCCATTC 59.240 45.455 0.00 0.00 37.28 2.67
81 82 3.026694 GCCAAGTAAGCAATCCCATTCT 58.973 45.455 0.00 0.00 0.00 2.40
82 83 3.067320 GCCAAGTAAGCAATCCCATTCTC 59.933 47.826 0.00 0.00 0.00 2.87
83 84 4.272489 CCAAGTAAGCAATCCCATTCTCA 58.728 43.478 0.00 0.00 0.00 3.27
84 85 4.096984 CCAAGTAAGCAATCCCATTCTCAC 59.903 45.833 0.00 0.00 0.00 3.51
85 86 4.574674 AGTAAGCAATCCCATTCTCACA 57.425 40.909 0.00 0.00 0.00 3.58
86 87 4.922206 AGTAAGCAATCCCATTCTCACAA 58.078 39.130 0.00 0.00 0.00 3.33
87 88 5.324409 AGTAAGCAATCCCATTCTCACAAA 58.676 37.500 0.00 0.00 0.00 2.83
88 89 4.525912 AAGCAATCCCATTCTCACAAAC 57.474 40.909 0.00 0.00 0.00 2.93
89 90 3.499338 AGCAATCCCATTCTCACAAACA 58.501 40.909 0.00 0.00 0.00 2.83
90 91 3.896888 AGCAATCCCATTCTCACAAACAA 59.103 39.130 0.00 0.00 0.00 2.83
91 92 4.344679 AGCAATCCCATTCTCACAAACAAA 59.655 37.500 0.00 0.00 0.00 2.83
92 93 4.448732 GCAATCCCATTCTCACAAACAAAC 59.551 41.667 0.00 0.00 0.00 2.93
93 94 5.599732 CAATCCCATTCTCACAAACAAACA 58.400 37.500 0.00 0.00 0.00 2.83
94 95 6.225318 CAATCCCATTCTCACAAACAAACAT 58.775 36.000 0.00 0.00 0.00 2.71
95 96 5.452078 TCCCATTCTCACAAACAAACATC 57.548 39.130 0.00 0.00 0.00 3.06
96 97 4.280677 TCCCATTCTCACAAACAAACATCC 59.719 41.667 0.00 0.00 0.00 3.51
97 98 4.039004 CCCATTCTCACAAACAAACATCCA 59.961 41.667 0.00 0.00 0.00 3.41
98 99 5.224888 CCATTCTCACAAACAAACATCCAG 58.775 41.667 0.00 0.00 0.00 3.86
99 100 3.988379 TCTCACAAACAAACATCCAGC 57.012 42.857 0.00 0.00 0.00 4.85
100 101 2.622942 TCTCACAAACAAACATCCAGCC 59.377 45.455 0.00 0.00 0.00 4.85
101 102 1.336440 TCACAAACAAACATCCAGCCG 59.664 47.619 0.00 0.00 0.00 5.52
102 103 0.673437 ACAAACAAACATCCAGCCGG 59.327 50.000 0.00 0.00 0.00 6.13
103 104 0.038343 CAAACAAACATCCAGCCGGG 60.038 55.000 2.18 0.00 38.37 5.73
111 112 2.366301 TCCAGCCGGGATTAGCCA 60.366 61.111 2.18 0.00 42.15 4.75
112 113 2.111878 CCAGCCGGGATTAGCCAG 59.888 66.667 2.18 0.00 40.01 4.85
118 119 3.923354 CGGGATTAGCCAGGATCAG 57.077 57.895 0.00 0.00 38.95 2.90
119 120 1.342074 CGGGATTAGCCAGGATCAGA 58.658 55.000 0.00 0.00 38.95 3.27
120 121 1.274728 CGGGATTAGCCAGGATCAGAG 59.725 57.143 0.00 0.00 38.95 3.35
121 122 2.614259 GGGATTAGCCAGGATCAGAGA 58.386 52.381 0.00 0.00 38.95 3.10
122 123 2.566724 GGGATTAGCCAGGATCAGAGAG 59.433 54.545 0.00 0.00 38.95 3.20
123 124 2.028203 GGATTAGCCAGGATCAGAGAGC 60.028 54.545 0.00 0.00 36.34 4.09
124 125 2.468301 TTAGCCAGGATCAGAGAGCT 57.532 50.000 0.00 0.00 0.00 4.09
125 126 1.993956 TAGCCAGGATCAGAGAGCTC 58.006 55.000 5.27 5.27 0.00 4.09
126 127 1.108727 AGCCAGGATCAGAGAGCTCG 61.109 60.000 8.37 0.00 34.09 5.03
127 128 2.040330 CCAGGATCAGAGAGCTCGG 58.960 63.158 8.37 2.24 34.09 4.63
128 129 1.462731 CCAGGATCAGAGAGCTCGGG 61.463 65.000 8.37 1.84 34.09 5.14
129 130 1.152567 AGGATCAGAGAGCTCGGGG 60.153 63.158 8.37 1.45 34.09 5.73
130 131 1.456705 GGATCAGAGAGCTCGGGGT 60.457 63.158 8.37 0.00 34.09 4.95
131 132 1.739049 GATCAGAGAGCTCGGGGTG 59.261 63.158 8.37 4.77 34.09 4.61
132 133 0.753479 GATCAGAGAGCTCGGGGTGA 60.753 60.000 8.37 10.12 34.09 4.02
133 134 1.040339 ATCAGAGAGCTCGGGGTGAC 61.040 60.000 8.37 0.00 34.09 3.67
134 135 1.979155 CAGAGAGCTCGGGGTGACA 60.979 63.158 8.37 0.00 34.09 3.58
135 136 1.228894 AGAGAGCTCGGGGTGACAA 60.229 57.895 8.37 0.00 34.09 3.18
136 137 0.616111 AGAGAGCTCGGGGTGACAAT 60.616 55.000 8.37 0.00 34.09 2.71
137 138 0.250513 GAGAGCTCGGGGTGACAATT 59.749 55.000 8.37 0.00 0.00 2.32
138 139 0.693049 AGAGCTCGGGGTGACAATTT 59.307 50.000 8.37 0.00 0.00 1.82
139 140 1.087501 GAGCTCGGGGTGACAATTTC 58.912 55.000 0.00 0.00 0.00 2.17
140 141 0.400213 AGCTCGGGGTGACAATTTCA 59.600 50.000 0.00 0.00 0.00 2.69
141 142 0.804989 GCTCGGGGTGACAATTTCAG 59.195 55.000 0.00 0.00 33.71 3.02
142 143 1.453155 CTCGGGGTGACAATTTCAGG 58.547 55.000 0.00 0.00 33.71 3.86
143 144 0.037590 TCGGGGTGACAATTTCAGGG 59.962 55.000 0.00 0.00 33.71 4.45
144 145 0.037590 CGGGGTGACAATTTCAGGGA 59.962 55.000 0.00 0.00 33.71 4.20
145 146 1.546773 CGGGGTGACAATTTCAGGGAA 60.547 52.381 0.00 0.00 33.71 3.97
146 147 2.820178 GGGGTGACAATTTCAGGGAAT 58.180 47.619 0.00 0.00 33.71 3.01
147 148 3.173151 GGGGTGACAATTTCAGGGAATT 58.827 45.455 0.00 0.00 33.71 2.17
148 149 3.195610 GGGGTGACAATTTCAGGGAATTC 59.804 47.826 0.00 0.00 33.71 2.17
149 150 3.831911 GGGTGACAATTTCAGGGAATTCA 59.168 43.478 7.93 0.00 33.71 2.57
150 151 4.283212 GGGTGACAATTTCAGGGAATTCAA 59.717 41.667 7.93 0.00 33.71 2.69
151 152 5.473039 GGTGACAATTTCAGGGAATTCAAG 58.527 41.667 7.93 0.00 33.71 3.02
152 153 5.011023 GGTGACAATTTCAGGGAATTCAAGT 59.989 40.000 7.93 0.00 33.71 3.16
153 154 6.462909 GGTGACAATTTCAGGGAATTCAAGTT 60.463 38.462 7.93 0.00 33.71 2.66
154 155 6.642540 GTGACAATTTCAGGGAATTCAAGTTC 59.357 38.462 7.93 0.00 33.71 3.01
155 156 6.323482 TGACAATTTCAGGGAATTCAAGTTCA 59.677 34.615 7.93 0.00 0.00 3.18
156 157 6.752168 ACAATTTCAGGGAATTCAAGTTCAG 58.248 36.000 7.93 0.00 0.00 3.02
157 158 5.990120 ATTTCAGGGAATTCAAGTTCAGG 57.010 39.130 7.93 0.00 0.00 3.86
158 159 3.439857 TCAGGGAATTCAAGTTCAGGG 57.560 47.619 7.93 0.00 0.00 4.45
159 160 2.716424 TCAGGGAATTCAAGTTCAGGGT 59.284 45.455 7.93 0.00 0.00 4.34
160 161 3.084786 CAGGGAATTCAAGTTCAGGGTC 58.915 50.000 7.93 0.00 0.00 4.46
161 162 2.989571 AGGGAATTCAAGTTCAGGGTCT 59.010 45.455 7.93 0.00 0.00 3.85
162 163 3.084786 GGGAATTCAAGTTCAGGGTCTG 58.915 50.000 7.93 0.00 0.00 3.51
163 164 3.244911 GGGAATTCAAGTTCAGGGTCTGA 60.245 47.826 7.93 0.00 38.87 3.27
164 165 4.568592 GGGAATTCAAGTTCAGGGTCTGAT 60.569 45.833 7.93 0.00 40.39 2.90
165 166 5.012893 GGAATTCAAGTTCAGGGTCTGATT 58.987 41.667 7.93 0.00 40.39 2.57
166 167 5.124617 GGAATTCAAGTTCAGGGTCTGATTC 59.875 44.000 7.93 0.00 40.39 2.52
167 168 4.705110 TTCAAGTTCAGGGTCTGATTCA 57.295 40.909 0.00 0.00 40.39 2.57
168 169 4.277515 TCAAGTTCAGGGTCTGATTCAG 57.722 45.455 7.38 7.38 40.39 3.02
169 170 3.903714 TCAAGTTCAGGGTCTGATTCAGA 59.096 43.478 12.38 12.38 40.39 3.27
180 181 2.937149 TCTGATTCAGACTCGGAGTACG 59.063 50.000 11.27 5.31 38.69 3.67
181 182 2.937149 CTGATTCAGACTCGGAGTACGA 59.063 50.000 11.27 7.72 40.93 3.43
182 183 3.374367 CTGATTCAGACTCGGAGTACGAA 59.626 47.826 18.56 18.56 41.96 3.85
183 184 4.035792 CTGATTCAGACTCGGAGTACGAAT 59.964 45.833 23.90 23.90 41.96 3.34
184 185 5.449314 CTGATTCAGACTCGGAGTACGAATT 60.449 44.000 24.22 14.44 41.96 2.17
185 186 6.897842 CTGATTCAGACTCGGAGTACGAATTT 60.898 42.308 24.22 12.37 41.96 1.82
186 187 7.678927 CTGATTCAGACTCGGAGTACGAATTTA 60.679 40.741 24.22 18.30 41.96 1.40
198 199 8.091385 GGAGTACGAATTTAAGGTCTTTTTCA 57.909 34.615 0.00 0.00 0.00 2.69
199 200 8.228464 GGAGTACGAATTTAAGGTCTTTTTCAG 58.772 37.037 0.00 0.00 0.00 3.02
200 201 8.897872 AGTACGAATTTAAGGTCTTTTTCAGA 57.102 30.769 0.00 0.00 0.00 3.27
212 213 5.659440 TCTTTTTCAGACTTTTGCCACTT 57.341 34.783 0.00 0.00 0.00 3.16
213 214 6.767524 TCTTTTTCAGACTTTTGCCACTTA 57.232 33.333 0.00 0.00 0.00 2.24
214 215 6.795399 TCTTTTTCAGACTTTTGCCACTTAG 58.205 36.000 0.00 0.00 0.00 2.18
259 260 2.159382 GATCGGGGAAGAAAACAAGCA 58.841 47.619 0.00 0.00 0.00 3.91
298 299 2.338984 GCGGCCCATAGTCCTACG 59.661 66.667 0.00 0.00 0.00 3.51
305 306 0.742505 CCATAGTCCTACGCCAACGA 59.257 55.000 0.00 0.00 43.93 3.85
432 597 6.032042 CGTATTTGGTAATTGCTCGTGTTTTC 59.968 38.462 0.00 0.00 0.00 2.29
433 598 5.508200 TTTGGTAATTGCTCGTGTTTTCT 57.492 34.783 0.00 0.00 0.00 2.52
434 599 6.621316 TTTGGTAATTGCTCGTGTTTTCTA 57.379 33.333 0.00 0.00 0.00 2.10
435 600 5.856126 TGGTAATTGCTCGTGTTTTCTAG 57.144 39.130 0.00 0.00 0.00 2.43
513 697 5.251764 AGGTGAAGAATTGTCCAGATCAAG 58.748 41.667 0.00 0.00 0.00 3.02
537 725 4.556592 AGTTACTGAGTCGAGGAGTACT 57.443 45.455 0.00 0.00 0.00 2.73
549 737 4.341806 TCGAGGAGTACTTTTTACCACACA 59.658 41.667 0.00 0.00 0.00 3.72
607 946 1.302033 ACTTGTGAGCTTCCAGGCG 60.302 57.895 0.00 0.00 37.29 5.52
645 985 0.498511 CGACGCGTATACACTGCATG 59.501 55.000 13.97 0.00 0.00 4.06
660 1000 0.868406 GCATGCATACGGCTACTTCC 59.132 55.000 14.21 0.00 45.15 3.46
697 1037 3.505836 GCTTTGACTTGGCAGCTAATTC 58.494 45.455 2.24 2.24 0.00 2.17
700 1040 3.988976 TGACTTGGCAGCTAATTCTCT 57.011 42.857 9.76 0.00 0.00 3.10
720 1060 0.317603 CGGTCTAGTGGTTATCGCCG 60.318 60.000 0.00 0.00 0.00 6.46
722 1062 1.268948 GGTCTAGTGGTTATCGCCGAC 60.269 57.143 0.00 0.00 0.00 4.79
824 1178 4.284178 TCGACCTATATATAAGCACCCCC 58.716 47.826 0.00 0.00 0.00 5.40
825 1179 4.016851 TCGACCTATATATAAGCACCCCCT 60.017 45.833 0.00 0.00 0.00 4.79
830 1184 0.766674 ATATAAGCACCCCCTCGGCA 60.767 55.000 0.00 0.00 33.26 5.69
863 1217 3.274288 GGCATAGAACAACAGCTAGCTT 58.726 45.455 16.46 0.00 0.00 3.74
885 1239 4.284178 TCGACCTATATATAAGCACCCCC 58.716 47.826 0.00 0.00 0.00 5.40
887 1241 4.341520 CGACCTATATATAAGCACCCCCTC 59.658 50.000 0.00 0.00 0.00 4.30
889 1243 3.641906 CCTATATATAAGCACCCCCTCGG 59.358 52.174 0.00 0.00 37.81 4.63
890 1244 1.272807 TATATAAGCACCCCCTCGGC 58.727 55.000 0.00 0.00 33.26 5.54
891 1245 0.766674 ATATAAGCACCCCCTCGGCA 60.767 55.000 0.00 0.00 33.26 5.69
892 1246 0.983905 TATAAGCACCCCCTCGGCAA 60.984 55.000 0.00 0.00 33.26 4.52
923 1277 1.943340 GGCATAGAACAACAGCTAGCC 59.057 52.381 12.13 0.00 0.00 3.93
924 1278 1.943340 GCATAGAACAACAGCTAGCCC 59.057 52.381 12.13 0.00 0.00 5.19
925 1279 2.680805 GCATAGAACAACAGCTAGCCCA 60.681 50.000 12.13 0.00 0.00 5.36
926 1280 3.813443 CATAGAACAACAGCTAGCCCAT 58.187 45.455 12.13 0.00 0.00 4.00
930 1284 0.034089 ACAACAGCTAGCCCATTCCC 60.034 55.000 12.13 0.00 0.00 3.97
932 1286 2.111878 CAGCTAGCCCATTCCCGG 59.888 66.667 12.13 0.00 0.00 5.73
939 1293 3.903208 GCCCATTCCCGGCATATAT 57.097 52.632 0.00 0.00 46.27 0.86
942 1296 2.643551 CCCATTCCCGGCATATATCAC 58.356 52.381 0.00 0.00 0.00 3.06
955 1309 1.737838 ATATCACCACCAACGCACAG 58.262 50.000 0.00 0.00 0.00 3.66
1112 1525 2.209064 GACGACTGCGGCCTCTGTAA 62.209 60.000 5.12 0.00 40.51 2.41
1121 1534 2.391389 GCCTCTGTAAGCGCACACC 61.391 63.158 11.47 0.00 0.00 4.16
1124 3410 1.002366 CTCTGTAAGCGCACACCATC 58.998 55.000 11.47 0.00 0.00 3.51
1126 3412 1.001974 TCTGTAAGCGCACACCATCTT 59.998 47.619 11.47 0.00 0.00 2.40
1133 3444 0.036010 CGCACACCATCTTCCTCCTT 60.036 55.000 0.00 0.00 0.00 3.36
1137 3448 3.539604 CACACCATCTTCCTCCTTGATC 58.460 50.000 0.00 0.00 0.00 2.92
1144 3455 3.453868 TCTTCCTCCTTGATCCATGTCA 58.546 45.455 0.00 0.00 0.00 3.58
1221 3556 1.103398 GTTGCCTGACTTGGTGCTGT 61.103 55.000 0.00 0.00 0.00 4.40
1574 3918 4.143333 CCGCTGATCGAACCCGGT 62.143 66.667 11.90 0.00 41.67 5.28
1576 3920 1.740296 CGCTGATCGAACCCGGTTT 60.740 57.895 3.77 0.00 41.67 3.27
1594 3938 3.950395 GGTTTCTCAATGCCTTGCTCTAT 59.050 43.478 0.00 0.00 32.11 1.98
1604 3954 2.636830 CCTTGCTCTATGTGTGAAGGG 58.363 52.381 0.00 0.00 0.00 3.95
1605 3955 2.237143 CCTTGCTCTATGTGTGAAGGGA 59.763 50.000 0.00 0.00 0.00 4.20
1606 3956 3.529533 CTTGCTCTATGTGTGAAGGGAG 58.470 50.000 0.00 0.00 0.00 4.30
1607 3957 2.540383 TGCTCTATGTGTGAAGGGAGT 58.460 47.619 0.00 0.00 0.00 3.85
1608 3958 3.708451 TGCTCTATGTGTGAAGGGAGTA 58.292 45.455 0.00 0.00 0.00 2.59
1609 3959 4.290093 TGCTCTATGTGTGAAGGGAGTAT 58.710 43.478 0.00 0.00 0.00 2.12
1626 3976 4.400884 GGAGTATGAGTATCCATCGAGCAT 59.599 45.833 0.00 0.00 33.08 3.79
1686 4141 2.132762 CAGGACCAGAAACGTGTGTAC 58.867 52.381 0.00 0.00 0.00 2.90
1718 4186 1.076332 GGATGGCAGAACGTGTGTAC 58.924 55.000 0.00 0.00 0.00 2.90
1747 4215 2.117137 CGCTCTGCATTTCATCATTGC 58.883 47.619 0.00 0.00 36.91 3.56
1929 6982 1.213430 AGAGGGGAGTAAGAGAGTCGG 59.787 57.143 0.00 0.00 0.00 4.79
2131 7187 1.203075 GGAGGGTAGACCGAGATGGAT 60.203 57.143 0.00 0.00 46.96 3.41
2147 7203 2.398588 TGGATGAAGAGGAAGGCGTAT 58.601 47.619 0.00 0.00 0.00 3.06
2154 7210 1.751924 AGAGGAAGGCGTATGAGTGAC 59.248 52.381 0.00 0.00 0.00 3.67
2199 7324 1.686052 CAGACTCATAGGTGCTCCCTC 59.314 57.143 0.00 0.00 44.81 4.30
2212 7339 1.402852 GCTCCCTCAAAACGAAATGCC 60.403 52.381 0.00 0.00 0.00 4.40
2256 9987 2.014010 AAAACAGACCATGTGCCCAT 57.986 45.000 0.00 0.00 43.00 4.00
2291 10022 9.976511 CTTCTAATACGGTATTTCTTCCATACA 57.023 33.333 17.74 0.00 0.00 2.29
2309 10069 8.661352 TCCATACATATTTACATGACACACAG 57.339 34.615 0.00 0.00 0.00 3.66
2372 10132 5.238432 TCGCATGTCACAAAAATTGTAGAGT 59.762 36.000 0.00 0.00 43.23 3.24
2373 10133 6.425417 TCGCATGTCACAAAAATTGTAGAGTA 59.575 34.615 0.00 0.00 43.23 2.59
2374 10134 6.519761 CGCATGTCACAAAAATTGTAGAGTAC 59.480 38.462 0.00 0.00 43.23 2.73
2375 10135 6.801862 GCATGTCACAAAAATTGTAGAGTACC 59.198 38.462 0.00 0.00 43.23 3.34
2376 10136 7.521423 GCATGTCACAAAAATTGTAGAGTACCA 60.521 37.037 0.00 0.00 43.23 3.25
2377 10137 8.514594 CATGTCACAAAAATTGTAGAGTACCAT 58.485 33.333 0.00 0.00 43.23 3.55
2378 10138 8.458573 TGTCACAAAAATTGTAGAGTACCATT 57.541 30.769 0.00 0.00 43.23 3.16
2379 10139 8.564574 TGTCACAAAAATTGTAGAGTACCATTC 58.435 33.333 0.00 0.00 43.23 2.67
2380 10140 8.564574 GTCACAAAAATTGTAGAGTACCATTCA 58.435 33.333 0.00 0.00 43.23 2.57
2381 10141 8.564574 TCACAAAAATTGTAGAGTACCATTCAC 58.435 33.333 0.00 0.00 43.23 3.18
2382 10142 8.567948 CACAAAAATTGTAGAGTACCATTCACT 58.432 33.333 0.00 0.00 43.23 3.41
2383 10143 9.131791 ACAAAAATTGTAGAGTACCATTCACTT 57.868 29.630 0.00 0.00 43.27 3.16
2384 10144 9.612620 CAAAAATTGTAGAGTACCATTCACTTC 57.387 33.333 0.00 0.00 0.00 3.01
2385 10145 7.596749 AAATTGTAGAGTACCATTCACTTCG 57.403 36.000 0.00 0.00 0.00 3.79
2386 10146 4.713824 TGTAGAGTACCATTCACTTCGG 57.286 45.455 0.00 0.00 0.00 4.30
2387 10147 4.084287 TGTAGAGTACCATTCACTTCGGT 58.916 43.478 0.00 0.00 36.79 4.69
2388 10148 4.525487 TGTAGAGTACCATTCACTTCGGTT 59.475 41.667 0.00 0.00 34.12 4.44
2389 10149 4.618920 AGAGTACCATTCACTTCGGTTT 57.381 40.909 0.00 0.00 34.12 3.27
2390 10150 4.315803 AGAGTACCATTCACTTCGGTTTG 58.684 43.478 0.00 0.00 34.12 2.93
2391 10151 4.039973 AGAGTACCATTCACTTCGGTTTGA 59.960 41.667 0.00 0.00 34.12 2.69
2392 10152 4.710324 AGTACCATTCACTTCGGTTTGAA 58.290 39.130 0.00 0.00 36.21 2.69
2393 10153 5.127491 AGTACCATTCACTTCGGTTTGAAA 58.873 37.500 0.00 0.00 35.42 2.69
2394 10154 5.768164 AGTACCATTCACTTCGGTTTGAAAT 59.232 36.000 0.00 0.00 35.42 2.17
2395 10155 4.870363 ACCATTCACTTCGGTTTGAAATG 58.130 39.130 0.00 0.00 35.17 2.32
2396 10156 4.582656 ACCATTCACTTCGGTTTGAAATGA 59.417 37.500 0.00 0.00 40.79 2.57
2401 10161 6.142818 TCACTTCGGTTTGAAATGAAATGT 57.857 33.333 4.92 0.00 39.68 2.71
2402 10162 7.265647 TCACTTCGGTTTGAAATGAAATGTA 57.734 32.000 4.92 0.00 39.68 2.29
2403 10163 7.881142 TCACTTCGGTTTGAAATGAAATGTAT 58.119 30.769 4.92 0.00 39.68 2.29
2404 10164 8.356657 TCACTTCGGTTTGAAATGAAATGTATT 58.643 29.630 4.92 0.00 39.68 1.89
2405 10165 8.977505 CACTTCGGTTTGAAATGAAATGTATTT 58.022 29.630 0.00 0.00 35.88 1.40
2406 10166 9.191995 ACTTCGGTTTGAAATGAAATGTATTTC 57.808 29.630 9.78 9.78 42.22 2.17
2407 10167 8.527567 TTCGGTTTGAAATGAAATGTATTTCC 57.472 30.769 13.19 1.12 41.55 3.13
2408 10168 7.093992 TCGGTTTGAAATGAAATGTATTTCCC 58.906 34.615 13.19 5.36 44.16 3.97
2409 10169 6.870965 CGGTTTGAAATGAAATGTATTTCCCA 59.129 34.615 13.19 5.32 44.16 4.37
2410 10170 7.386299 CGGTTTGAAATGAAATGTATTTCCCAA 59.614 33.333 13.19 9.66 44.16 4.12
2411 10171 8.503196 GGTTTGAAATGAAATGTATTTCCCAAC 58.497 33.333 13.19 0.00 44.16 3.77
2412 10172 9.050601 GTTTGAAATGAAATGTATTTCCCAACA 57.949 29.630 13.19 7.29 44.16 3.33
2413 10173 8.830201 TTGAAATGAAATGTATTTCCCAACAG 57.170 30.769 13.19 0.00 44.16 3.16
2414 10174 7.961351 TGAAATGAAATGTATTTCCCAACAGT 58.039 30.769 13.19 0.00 44.16 3.55
2415 10175 7.871973 TGAAATGAAATGTATTTCCCAACAGTG 59.128 33.333 13.19 0.00 44.16 3.66
2416 10176 6.916360 ATGAAATGTATTTCCCAACAGTGT 57.084 33.333 13.19 0.00 44.16 3.55
2417 10177 8.415950 AATGAAATGTATTTCCCAACAGTGTA 57.584 30.769 13.19 0.00 44.16 2.90
2418 10178 7.825331 TGAAATGTATTTCCCAACAGTGTAA 57.175 32.000 13.19 0.00 44.16 2.41
2419 10179 8.415950 TGAAATGTATTTCCCAACAGTGTAAT 57.584 30.769 13.19 0.00 44.16 1.89
2420 10180 8.865090 TGAAATGTATTTCCCAACAGTGTAATT 58.135 29.630 13.19 0.00 44.16 1.40
2421 10181 9.705290 GAAATGTATTTCCCAACAGTGTAATTT 57.295 29.630 0.00 0.00 40.10 1.82
2428 10188 6.952773 TCCCAACAGTGTAATTTATATGGC 57.047 37.500 0.00 0.00 0.00 4.40
2429 10189 6.427441 TCCCAACAGTGTAATTTATATGGCA 58.573 36.000 0.00 0.00 0.00 4.92
2430 10190 6.892456 TCCCAACAGTGTAATTTATATGGCAA 59.108 34.615 0.00 0.00 0.00 4.52
2431 10191 6.978080 CCCAACAGTGTAATTTATATGGCAAC 59.022 38.462 0.00 0.00 0.00 4.17
2432 10192 6.690957 CCAACAGTGTAATTTATATGGCAACG 59.309 38.462 0.00 0.00 42.51 4.10
2433 10193 7.414651 CCAACAGTGTAATTTATATGGCAACGA 60.415 37.037 0.00 0.00 42.51 3.85
2434 10194 7.618502 ACAGTGTAATTTATATGGCAACGAA 57.381 32.000 0.00 0.00 42.51 3.85
2435 10195 8.220755 ACAGTGTAATTTATATGGCAACGAAT 57.779 30.769 0.00 0.00 42.51 3.34
2436 10196 8.682710 ACAGTGTAATTTATATGGCAACGAATT 58.317 29.630 0.00 0.00 42.51 2.17
2437 10197 9.515020 CAGTGTAATTTATATGGCAACGAATTT 57.485 29.630 0.00 0.00 42.51 1.82
2465 10225 1.064134 GCCAATCTTTTAGGCGCCG 59.936 57.895 23.20 6.32 38.86 6.46
2466 10226 1.654023 GCCAATCTTTTAGGCGCCGT 61.654 55.000 23.20 12.38 38.86 5.68
2467 10227 0.098728 CCAATCTTTTAGGCGCCGTG 59.901 55.000 23.20 10.70 0.00 4.94
2468 10228 0.802494 CAATCTTTTAGGCGCCGTGT 59.198 50.000 23.20 6.30 0.00 4.49
2469 10229 2.004017 CAATCTTTTAGGCGCCGTGTA 58.996 47.619 23.20 5.06 0.00 2.90
2470 10230 2.389962 ATCTTTTAGGCGCCGTGTAA 57.610 45.000 23.20 11.95 0.00 2.41
2471 10231 2.166821 TCTTTTAGGCGCCGTGTAAA 57.833 45.000 23.20 17.57 0.00 2.01
2472 10232 2.702261 TCTTTTAGGCGCCGTGTAAAT 58.298 42.857 23.20 3.61 0.00 1.40
2473 10233 3.859443 TCTTTTAGGCGCCGTGTAAATA 58.141 40.909 23.20 9.77 0.00 1.40
2474 10234 3.866910 TCTTTTAGGCGCCGTGTAAATAG 59.133 43.478 23.20 17.67 0.00 1.73
2475 10235 3.523606 TTTAGGCGCCGTGTAAATAGA 57.476 42.857 23.20 0.00 0.00 1.98
2476 10236 2.787601 TAGGCGCCGTGTAAATAGAG 57.212 50.000 23.20 0.00 0.00 2.43
2477 10237 0.529992 AGGCGCCGTGTAAATAGAGC 60.530 55.000 23.20 0.00 0.00 4.09
2478 10238 1.496403 GGCGCCGTGTAAATAGAGCC 61.496 60.000 12.58 0.00 36.32 4.70
2479 10239 1.818221 GCGCCGTGTAAATAGAGCCG 61.818 60.000 0.00 0.00 0.00 5.52
2480 10240 1.213094 CGCCGTGTAAATAGAGCCGG 61.213 60.000 0.00 0.00 38.45 6.13
2481 10241 0.103572 GCCGTGTAAATAGAGCCGGA 59.896 55.000 5.05 0.00 37.66 5.14
2482 10242 1.868519 GCCGTGTAAATAGAGCCGGAG 60.869 57.143 5.05 0.00 37.66 4.63
2483 10243 1.407979 CCGTGTAAATAGAGCCGGAGT 59.592 52.381 5.05 0.00 37.66 3.85
2484 10244 2.620115 CCGTGTAAATAGAGCCGGAGTA 59.380 50.000 5.05 0.00 37.66 2.59
2485 10245 3.067180 CCGTGTAAATAGAGCCGGAGTAA 59.933 47.826 5.05 0.00 37.66 2.24
2486 10246 4.261909 CCGTGTAAATAGAGCCGGAGTAAT 60.262 45.833 5.05 0.00 37.66 1.89
2487 10247 5.287226 CGTGTAAATAGAGCCGGAGTAATT 58.713 41.667 5.05 0.00 0.00 1.40
2488 10248 5.401674 CGTGTAAATAGAGCCGGAGTAATTC 59.598 44.000 5.05 0.00 0.00 2.17
2489 10249 5.695363 GTGTAAATAGAGCCGGAGTAATTCC 59.305 44.000 5.05 0.00 43.04 3.01
2490 10250 5.601313 TGTAAATAGAGCCGGAGTAATTCCT 59.399 40.000 5.05 0.00 44.41 3.36
2491 10251 6.779049 TGTAAATAGAGCCGGAGTAATTCCTA 59.221 38.462 5.05 0.00 44.41 2.94
2492 10252 6.742559 AAATAGAGCCGGAGTAATTCCTAA 57.257 37.500 5.05 0.00 44.41 2.69
2493 10253 5.725325 ATAGAGCCGGAGTAATTCCTAAC 57.275 43.478 5.05 0.00 44.41 2.34
2494 10254 2.699321 AGAGCCGGAGTAATTCCTAACC 59.301 50.000 5.05 0.00 44.41 2.85
2495 10255 2.699321 GAGCCGGAGTAATTCCTAACCT 59.301 50.000 5.05 0.00 44.41 3.50
2496 10256 2.434702 AGCCGGAGTAATTCCTAACCTG 59.565 50.000 5.05 0.00 44.41 4.00
2497 10257 2.484947 GCCGGAGTAATTCCTAACCTGG 60.485 54.545 5.05 0.00 44.41 4.45
2498 10258 2.104281 CCGGAGTAATTCCTAACCTGGG 59.896 54.545 0.00 0.00 44.41 4.45
2499 10259 2.770232 CGGAGTAATTCCTAACCTGGGT 59.230 50.000 0.00 0.00 44.41 4.51
2500 10260 3.431766 CGGAGTAATTCCTAACCTGGGTG 60.432 52.174 0.00 0.00 44.41 4.61
2501 10261 3.522343 GGAGTAATTCCTAACCTGGGTGT 59.478 47.826 0.00 0.00 43.16 4.16
2502 10262 4.383880 GGAGTAATTCCTAACCTGGGTGTC 60.384 50.000 0.00 0.00 43.16 3.67
2503 10263 3.522343 AGTAATTCCTAACCTGGGTGTCC 59.478 47.826 0.00 0.00 0.00 4.02
2504 10264 2.053747 ATTCCTAACCTGGGTGTCCA 57.946 50.000 0.00 0.00 41.58 4.02
2505 10265 2.053747 TTCCTAACCTGGGTGTCCAT 57.946 50.000 0.00 0.00 43.11 3.41
2506 10266 1.580059 TCCTAACCTGGGTGTCCATC 58.420 55.000 0.00 0.00 43.11 3.51
2507 10267 0.546598 CCTAACCTGGGTGTCCATCC 59.453 60.000 0.00 0.00 43.11 3.51
2508 10268 1.285280 CTAACCTGGGTGTCCATCCA 58.715 55.000 0.00 0.00 43.11 3.41
2509 10269 1.846439 CTAACCTGGGTGTCCATCCAT 59.154 52.381 0.00 0.00 41.53 3.41
2510 10270 0.332632 AACCTGGGTGTCCATCCATG 59.667 55.000 0.00 0.00 41.53 3.66
2511 10271 0.549902 ACCTGGGTGTCCATCCATGA 60.550 55.000 8.61 0.00 41.53 3.07
2512 10272 0.848735 CCTGGGTGTCCATCCATGAT 59.151 55.000 0.00 0.00 41.53 2.45
2513 10273 1.216175 CCTGGGTGTCCATCCATGATT 59.784 52.381 0.00 0.00 41.53 2.57
2514 10274 2.304092 CTGGGTGTCCATCCATGATTG 58.696 52.381 0.00 0.00 41.53 2.67
2515 10275 1.640149 TGGGTGTCCATCCATGATTGT 59.360 47.619 0.00 0.00 36.49 2.71
2516 10276 2.301346 GGGTGTCCATCCATGATTGTC 58.699 52.381 0.00 0.00 0.00 3.18
2517 10277 1.942657 GGTGTCCATCCATGATTGTCG 59.057 52.381 0.00 0.00 0.00 4.35
2518 10278 2.419990 GGTGTCCATCCATGATTGTCGA 60.420 50.000 0.00 0.00 0.00 4.20
2519 10279 2.868583 GTGTCCATCCATGATTGTCGAG 59.131 50.000 0.00 0.00 0.00 4.04
2520 10280 1.869767 GTCCATCCATGATTGTCGAGC 59.130 52.381 0.00 0.00 0.00 5.03
2521 10281 1.202687 TCCATCCATGATTGTCGAGCC 60.203 52.381 0.00 0.00 0.00 4.70
2522 10282 1.233019 CATCCATGATTGTCGAGCCC 58.767 55.000 0.00 0.00 0.00 5.19
2523 10283 0.839277 ATCCATGATTGTCGAGCCCA 59.161 50.000 0.00 0.00 0.00 5.36
2524 10284 0.107703 TCCATGATTGTCGAGCCCAC 60.108 55.000 0.00 0.00 0.00 4.61
2525 10285 1.431488 CCATGATTGTCGAGCCCACG 61.431 60.000 0.00 0.00 0.00 4.94
2526 10286 1.153369 ATGATTGTCGAGCCCACGG 60.153 57.895 0.00 0.00 0.00 4.94
2527 10287 1.899437 ATGATTGTCGAGCCCACGGT 61.899 55.000 0.00 0.00 0.00 4.83
2528 10288 1.810030 GATTGTCGAGCCCACGGTC 60.810 63.158 0.00 0.00 0.00 4.79
2529 10289 2.227089 GATTGTCGAGCCCACGGTCT 62.227 60.000 0.00 0.00 34.19 3.85
2530 10290 1.827399 ATTGTCGAGCCCACGGTCTT 61.827 55.000 0.00 0.00 34.19 3.01
2531 10291 2.126031 GTCGAGCCCACGGTCTTC 60.126 66.667 0.00 0.00 34.19 2.87
2532 10292 3.379445 TCGAGCCCACGGTCTTCC 61.379 66.667 0.00 0.00 34.19 3.46
2533 10293 4.452733 CGAGCCCACGGTCTTCCC 62.453 72.222 0.00 0.00 34.19 3.97
2534 10294 3.003763 GAGCCCACGGTCTTCCCT 61.004 66.667 0.00 0.00 33.54 4.20
2535 10295 1.684734 GAGCCCACGGTCTTCCCTA 60.685 63.158 0.00 0.00 33.54 3.53
2536 10296 1.229400 AGCCCACGGTCTTCCCTAA 60.229 57.895 0.00 0.00 0.00 2.69
2537 10297 0.620700 AGCCCACGGTCTTCCCTAAT 60.621 55.000 0.00 0.00 0.00 1.73
2538 10298 0.463833 GCCCACGGTCTTCCCTAATG 60.464 60.000 0.00 0.00 0.00 1.90
2539 10299 0.180406 CCCACGGTCTTCCCTAATGG 59.820 60.000 0.00 0.00 0.00 3.16
2540 10300 1.200519 CCACGGTCTTCCCTAATGGA 58.799 55.000 0.00 0.00 43.18 3.41
2541 10301 1.768870 CCACGGTCTTCCCTAATGGAT 59.231 52.381 0.00 0.00 44.66 3.41
2542 10302 2.485479 CCACGGTCTTCCCTAATGGATG 60.485 54.545 0.00 0.00 44.66 3.51
2543 10303 2.170607 CACGGTCTTCCCTAATGGATGT 59.829 50.000 0.00 0.00 44.66 3.06
2544 10304 2.434702 ACGGTCTTCCCTAATGGATGTC 59.565 50.000 0.00 0.00 44.66 3.06
2545 10305 2.545952 CGGTCTTCCCTAATGGATGTCG 60.546 54.545 0.00 0.00 44.66 4.35
2546 10306 2.484889 GTCTTCCCTAATGGATGTCGC 58.515 52.381 0.00 0.00 44.66 5.19
2547 10307 2.103263 GTCTTCCCTAATGGATGTCGCT 59.897 50.000 0.00 0.00 44.66 4.93
2548 10308 2.103094 TCTTCCCTAATGGATGTCGCTG 59.897 50.000 0.00 0.00 44.66 5.18
2549 10309 0.758734 TCCCTAATGGATGTCGCTGG 59.241 55.000 0.00 0.00 38.61 4.85
2550 10310 0.469917 CCCTAATGGATGTCGCTGGT 59.530 55.000 0.00 0.00 35.39 4.00
2551 10311 1.134098 CCCTAATGGATGTCGCTGGTT 60.134 52.381 0.00 0.00 35.39 3.67
2552 10312 2.643551 CCTAATGGATGTCGCTGGTTT 58.356 47.619 0.00 0.00 34.57 3.27
2553 10313 3.016736 CCTAATGGATGTCGCTGGTTTT 58.983 45.455 0.00 0.00 34.57 2.43
2554 10314 3.443681 CCTAATGGATGTCGCTGGTTTTT 59.556 43.478 0.00 0.00 34.57 1.94
2555 10315 3.575965 AATGGATGTCGCTGGTTTTTC 57.424 42.857 0.00 0.00 0.00 2.29
2556 10316 2.270352 TGGATGTCGCTGGTTTTTCT 57.730 45.000 0.00 0.00 0.00 2.52
2557 10317 2.582052 TGGATGTCGCTGGTTTTTCTT 58.418 42.857 0.00 0.00 0.00 2.52
2558 10318 2.955660 TGGATGTCGCTGGTTTTTCTTT 59.044 40.909 0.00 0.00 0.00 2.52
2559 10319 3.383185 TGGATGTCGCTGGTTTTTCTTTT 59.617 39.130 0.00 0.00 0.00 2.27
2560 10320 4.142049 TGGATGTCGCTGGTTTTTCTTTTT 60.142 37.500 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.557290 GGGCCATACCGTCCCCTC 61.557 72.222 4.39 0.00 40.62 4.30
3 4 2.766651 TCTGGGCCATACCGTCCC 60.767 66.667 6.72 0.00 40.62 4.46
4 5 1.122019 ATCTCTGGGCCATACCGTCC 61.122 60.000 6.72 0.00 40.62 4.79
6 7 1.464376 CGATCTCTGGGCCATACCGT 61.464 60.000 6.72 0.00 40.62 4.83
8 9 1.122019 ACCGATCTCTGGGCCATACC 61.122 60.000 6.72 0.00 37.93 2.73
9 10 0.318762 GACCGATCTCTGGGCCATAC 59.681 60.000 6.72 0.00 0.00 2.39
10 11 2.746697 GACCGATCTCTGGGCCATA 58.253 57.895 6.72 0.00 0.00 2.74
11 12 3.555967 GACCGATCTCTGGGCCAT 58.444 61.111 6.72 0.00 0.00 4.40
14 15 1.118356 ATCTGGACCGATCTCTGGGC 61.118 60.000 0.00 0.00 0.00 5.36
15 16 1.069823 CAATCTGGACCGATCTCTGGG 59.930 57.143 0.00 0.00 0.00 4.45
16 17 1.759445 ACAATCTGGACCGATCTCTGG 59.241 52.381 0.00 0.00 0.00 3.86
17 18 2.428530 TCACAATCTGGACCGATCTCTG 59.571 50.000 0.00 0.00 0.00 3.35
18 19 2.739943 TCACAATCTGGACCGATCTCT 58.260 47.619 0.00 0.00 0.00 3.10
19 20 3.068732 TCATCACAATCTGGACCGATCTC 59.931 47.826 0.00 0.00 0.00 2.75
20 21 3.033909 TCATCACAATCTGGACCGATCT 58.966 45.455 0.00 0.00 0.00 2.75
21 22 3.459232 TCATCACAATCTGGACCGATC 57.541 47.619 0.28 0.00 0.00 3.69
22 23 4.428294 AATCATCACAATCTGGACCGAT 57.572 40.909 0.00 0.00 0.00 4.18
23 24 3.912496 AATCATCACAATCTGGACCGA 57.088 42.857 0.00 0.00 0.00 4.69
24 25 3.313526 GGAAATCATCACAATCTGGACCG 59.686 47.826 0.00 0.00 0.00 4.79
25 26 4.530875 AGGAAATCATCACAATCTGGACC 58.469 43.478 0.00 0.00 0.00 4.46
26 27 5.435291 AGAGGAAATCATCACAATCTGGAC 58.565 41.667 0.00 0.00 0.00 4.02
27 28 5.397221 GGAGAGGAAATCATCACAATCTGGA 60.397 44.000 0.00 0.00 0.00 3.86
28 29 4.820716 GGAGAGGAAATCATCACAATCTGG 59.179 45.833 0.00 0.00 0.00 3.86
29 30 5.434408 TGGAGAGGAAATCATCACAATCTG 58.566 41.667 0.00 0.00 0.00 2.90
30 31 5.705397 TGGAGAGGAAATCATCACAATCT 57.295 39.130 0.00 0.00 0.00 2.40
31 32 7.336427 GGATATGGAGAGGAAATCATCACAATC 59.664 40.741 0.00 3.55 0.00 2.67
32 33 7.173722 GGATATGGAGAGGAAATCATCACAAT 58.826 38.462 0.00 0.00 0.00 2.71
33 34 6.466326 GGGATATGGAGAGGAAATCATCACAA 60.466 42.308 0.00 0.00 0.00 3.33
34 35 5.013495 GGGATATGGAGAGGAAATCATCACA 59.987 44.000 0.00 0.00 0.00 3.58
35 36 5.250313 AGGGATATGGAGAGGAAATCATCAC 59.750 44.000 0.00 0.00 0.00 3.06
36 37 5.250082 CAGGGATATGGAGAGGAAATCATCA 59.750 44.000 0.00 0.00 0.00 3.07
37 38 5.743117 CAGGGATATGGAGAGGAAATCATC 58.257 45.833 0.00 0.00 0.00 2.92
38 39 4.018597 GCAGGGATATGGAGAGGAAATCAT 60.019 45.833 0.00 0.00 0.00 2.45
39 40 3.328931 GCAGGGATATGGAGAGGAAATCA 59.671 47.826 0.00 0.00 0.00 2.57
40 41 3.308046 GGCAGGGATATGGAGAGGAAATC 60.308 52.174 0.00 0.00 0.00 2.17
41 42 2.646798 GGCAGGGATATGGAGAGGAAAT 59.353 50.000 0.00 0.00 0.00 2.17
42 43 2.057922 GGCAGGGATATGGAGAGGAAA 58.942 52.381 0.00 0.00 0.00 3.13
43 44 1.061424 TGGCAGGGATATGGAGAGGAA 60.061 52.381 0.00 0.00 0.00 3.36
44 45 0.567687 TGGCAGGGATATGGAGAGGA 59.432 55.000 0.00 0.00 0.00 3.71
45 46 1.350351 CTTGGCAGGGATATGGAGAGG 59.650 57.143 0.00 0.00 0.00 3.69
46 47 2.053244 ACTTGGCAGGGATATGGAGAG 58.947 52.381 0.44 0.00 0.00 3.20
47 48 2.196742 ACTTGGCAGGGATATGGAGA 57.803 50.000 0.44 0.00 0.00 3.71
48 49 3.808618 GCTTACTTGGCAGGGATATGGAG 60.809 52.174 0.44 0.00 0.00 3.86
49 50 2.106511 GCTTACTTGGCAGGGATATGGA 59.893 50.000 0.44 0.00 0.00 3.41
50 51 2.158623 TGCTTACTTGGCAGGGATATGG 60.159 50.000 0.44 0.00 34.56 2.74
51 52 3.213206 TGCTTACTTGGCAGGGATATG 57.787 47.619 0.44 0.00 34.56 1.78
52 53 3.951563 TTGCTTACTTGGCAGGGATAT 57.048 42.857 0.44 0.00 40.90 1.63
53 54 3.435026 GGATTGCTTACTTGGCAGGGATA 60.435 47.826 0.44 0.00 40.90 2.59
54 55 2.659428 GATTGCTTACTTGGCAGGGAT 58.341 47.619 0.44 0.00 40.90 3.85
55 56 1.340991 GGATTGCTTACTTGGCAGGGA 60.341 52.381 0.44 0.00 40.90 4.20
56 57 1.106285 GGATTGCTTACTTGGCAGGG 58.894 55.000 0.44 0.00 40.90 4.45
57 58 1.106285 GGGATTGCTTACTTGGCAGG 58.894 55.000 0.00 0.00 40.90 4.85
58 59 1.838112 TGGGATTGCTTACTTGGCAG 58.162 50.000 0.00 0.00 40.90 4.85
59 60 2.530460 ATGGGATTGCTTACTTGGCA 57.470 45.000 0.00 0.00 37.97 4.92
60 61 3.026694 AGAATGGGATTGCTTACTTGGC 58.973 45.455 0.00 0.00 0.00 4.52
61 62 4.096984 GTGAGAATGGGATTGCTTACTTGG 59.903 45.833 0.00 0.00 0.00 3.61
62 63 4.701651 TGTGAGAATGGGATTGCTTACTTG 59.298 41.667 0.00 0.00 0.00 3.16
63 64 4.922206 TGTGAGAATGGGATTGCTTACTT 58.078 39.130 0.00 0.00 0.00 2.24
64 65 4.574674 TGTGAGAATGGGATTGCTTACT 57.425 40.909 0.00 0.00 0.00 2.24
65 66 5.048083 TGTTTGTGAGAATGGGATTGCTTAC 60.048 40.000 0.00 0.00 0.00 2.34
66 67 5.076182 TGTTTGTGAGAATGGGATTGCTTA 58.924 37.500 0.00 0.00 0.00 3.09
67 68 3.896888 TGTTTGTGAGAATGGGATTGCTT 59.103 39.130 0.00 0.00 0.00 3.91
68 69 3.499338 TGTTTGTGAGAATGGGATTGCT 58.501 40.909 0.00 0.00 0.00 3.91
69 70 3.940209 TGTTTGTGAGAATGGGATTGC 57.060 42.857 0.00 0.00 0.00 3.56
70 71 5.599732 TGTTTGTTTGTGAGAATGGGATTG 58.400 37.500 0.00 0.00 0.00 2.67
71 72 5.867903 TGTTTGTTTGTGAGAATGGGATT 57.132 34.783 0.00 0.00 0.00 3.01
72 73 5.047092 GGATGTTTGTTTGTGAGAATGGGAT 60.047 40.000 0.00 0.00 0.00 3.85
73 74 4.280677 GGATGTTTGTTTGTGAGAATGGGA 59.719 41.667 0.00 0.00 0.00 4.37
74 75 4.039004 TGGATGTTTGTTTGTGAGAATGGG 59.961 41.667 0.00 0.00 0.00 4.00
75 76 5.199024 TGGATGTTTGTTTGTGAGAATGG 57.801 39.130 0.00 0.00 0.00 3.16
76 77 4.682860 GCTGGATGTTTGTTTGTGAGAATG 59.317 41.667 0.00 0.00 0.00 2.67
77 78 4.262164 GGCTGGATGTTTGTTTGTGAGAAT 60.262 41.667 0.00 0.00 0.00 2.40
78 79 3.068024 GGCTGGATGTTTGTTTGTGAGAA 59.932 43.478 0.00 0.00 0.00 2.87
79 80 2.622942 GGCTGGATGTTTGTTTGTGAGA 59.377 45.455 0.00 0.00 0.00 3.27
80 81 2.605338 CGGCTGGATGTTTGTTTGTGAG 60.605 50.000 0.00 0.00 0.00 3.51
81 82 1.336440 CGGCTGGATGTTTGTTTGTGA 59.664 47.619 0.00 0.00 0.00 3.58
82 83 1.602668 CCGGCTGGATGTTTGTTTGTG 60.603 52.381 5.28 0.00 37.49 3.33
83 84 0.673437 CCGGCTGGATGTTTGTTTGT 59.327 50.000 5.28 0.00 37.49 2.83
84 85 0.038343 CCCGGCTGGATGTTTGTTTG 60.038 55.000 15.09 0.00 37.49 2.93
85 86 0.178975 TCCCGGCTGGATGTTTGTTT 60.179 50.000 15.09 0.00 38.61 2.83
86 87 1.458486 TCCCGGCTGGATGTTTGTT 59.542 52.632 15.09 0.00 38.61 2.83
87 88 3.166434 TCCCGGCTGGATGTTTGT 58.834 55.556 15.09 0.00 38.61 2.83
95 96 2.111878 CTGGCTAATCCCGGCTGG 59.888 66.667 3.88 3.88 0.00 4.85
96 97 1.772819 ATCCTGGCTAATCCCGGCTG 61.773 60.000 0.00 0.00 38.94 4.85
97 98 1.462238 ATCCTGGCTAATCCCGGCT 60.462 57.895 0.00 0.00 38.94 5.52
98 99 1.003233 GATCCTGGCTAATCCCGGC 60.003 63.158 0.00 0.00 38.94 6.13
99 100 0.322975 CTGATCCTGGCTAATCCCGG 59.677 60.000 0.00 0.00 40.32 5.73
100 101 1.274728 CTCTGATCCTGGCTAATCCCG 59.725 57.143 0.00 0.00 0.00 5.14
101 102 2.566724 CTCTCTGATCCTGGCTAATCCC 59.433 54.545 0.00 0.00 0.00 3.85
102 103 2.028203 GCTCTCTGATCCTGGCTAATCC 60.028 54.545 0.00 0.00 0.00 3.01
103 104 2.899256 AGCTCTCTGATCCTGGCTAATC 59.101 50.000 0.00 0.00 0.00 1.75
104 105 2.899256 GAGCTCTCTGATCCTGGCTAAT 59.101 50.000 6.43 0.00 0.00 1.73
105 106 2.315176 GAGCTCTCTGATCCTGGCTAA 58.685 52.381 6.43 0.00 0.00 3.09
106 107 1.817350 CGAGCTCTCTGATCCTGGCTA 60.817 57.143 12.85 0.00 0.00 3.93
107 108 1.108727 CGAGCTCTCTGATCCTGGCT 61.109 60.000 12.85 0.00 0.00 4.75
108 109 1.363443 CGAGCTCTCTGATCCTGGC 59.637 63.158 12.85 0.00 0.00 4.85
109 110 1.462731 CCCGAGCTCTCTGATCCTGG 61.463 65.000 12.85 1.71 0.00 4.45
110 111 1.462731 CCCCGAGCTCTCTGATCCTG 61.463 65.000 12.85 0.00 0.00 3.86
111 112 1.152567 CCCCGAGCTCTCTGATCCT 60.153 63.158 12.85 0.00 0.00 3.24
112 113 1.456705 ACCCCGAGCTCTCTGATCC 60.457 63.158 12.85 0.00 0.00 3.36
113 114 0.753479 TCACCCCGAGCTCTCTGATC 60.753 60.000 12.85 0.00 0.00 2.92
114 115 1.040339 GTCACCCCGAGCTCTCTGAT 61.040 60.000 12.85 0.00 0.00 2.90
115 116 1.679305 GTCACCCCGAGCTCTCTGA 60.679 63.158 12.85 3.94 0.00 3.27
116 117 1.536073 TTGTCACCCCGAGCTCTCTG 61.536 60.000 12.85 1.87 0.00 3.35
117 118 0.616111 ATTGTCACCCCGAGCTCTCT 60.616 55.000 12.85 0.00 0.00 3.10
118 119 0.250513 AATTGTCACCCCGAGCTCTC 59.749 55.000 12.85 0.00 0.00 3.20
119 120 0.693049 AAATTGTCACCCCGAGCTCT 59.307 50.000 12.85 0.00 0.00 4.09
120 121 1.087501 GAAATTGTCACCCCGAGCTC 58.912 55.000 2.73 2.73 0.00 4.09
121 122 0.400213 TGAAATTGTCACCCCGAGCT 59.600 50.000 0.00 0.00 0.00 4.09
122 123 0.804989 CTGAAATTGTCACCCCGAGC 59.195 55.000 0.00 0.00 31.13 5.03
123 124 1.453155 CCTGAAATTGTCACCCCGAG 58.547 55.000 0.00 0.00 31.13 4.63
124 125 0.037590 CCCTGAAATTGTCACCCCGA 59.962 55.000 0.00 0.00 31.13 5.14
125 126 0.037590 TCCCTGAAATTGTCACCCCG 59.962 55.000 0.00 0.00 31.13 5.73
126 127 2.302587 TTCCCTGAAATTGTCACCCC 57.697 50.000 0.00 0.00 31.13 4.95
127 128 3.831911 TGAATTCCCTGAAATTGTCACCC 59.168 43.478 2.27 0.00 31.13 4.61
128 129 5.011023 ACTTGAATTCCCTGAAATTGTCACC 59.989 40.000 2.27 0.00 31.13 4.02
129 130 6.089249 ACTTGAATTCCCTGAAATTGTCAC 57.911 37.500 2.27 0.00 31.13 3.67
130 131 6.323482 TGAACTTGAATTCCCTGAAATTGTCA 59.677 34.615 2.27 0.00 34.17 3.58
131 132 6.748132 TGAACTTGAATTCCCTGAAATTGTC 58.252 36.000 2.27 0.00 0.00 3.18
132 133 6.239402 CCTGAACTTGAATTCCCTGAAATTGT 60.239 38.462 2.27 0.00 0.00 2.71
133 134 6.161381 CCTGAACTTGAATTCCCTGAAATTG 58.839 40.000 2.27 0.00 0.00 2.32
134 135 5.246883 CCCTGAACTTGAATTCCCTGAAATT 59.753 40.000 2.27 0.00 0.00 1.82
135 136 4.774200 CCCTGAACTTGAATTCCCTGAAAT 59.226 41.667 2.27 0.00 0.00 2.17
136 137 4.151883 CCCTGAACTTGAATTCCCTGAAA 58.848 43.478 2.27 0.00 0.00 2.69
137 138 3.140144 ACCCTGAACTTGAATTCCCTGAA 59.860 43.478 2.27 0.00 0.00 3.02
138 139 2.716424 ACCCTGAACTTGAATTCCCTGA 59.284 45.455 2.27 0.00 0.00 3.86
139 140 3.084786 GACCCTGAACTTGAATTCCCTG 58.915 50.000 2.27 0.00 0.00 4.45
140 141 2.989571 AGACCCTGAACTTGAATTCCCT 59.010 45.455 2.27 0.00 0.00 4.20
141 142 3.084786 CAGACCCTGAACTTGAATTCCC 58.915 50.000 2.27 0.00 32.44 3.97
142 143 4.021102 TCAGACCCTGAACTTGAATTCC 57.979 45.455 2.27 0.00 37.57 3.01
143 144 5.707298 TGAATCAGACCCTGAACTTGAATTC 59.293 40.000 0.00 0.00 44.04 2.17
144 145 5.634118 TGAATCAGACCCTGAACTTGAATT 58.366 37.500 0.43 0.00 44.04 2.17
145 146 5.013495 TCTGAATCAGACCCTGAACTTGAAT 59.987 40.000 9.18 0.00 44.04 2.57
146 147 4.347876 TCTGAATCAGACCCTGAACTTGAA 59.652 41.667 9.18 0.00 44.04 2.69
147 148 3.903714 TCTGAATCAGACCCTGAACTTGA 59.096 43.478 9.18 0.00 44.04 3.02
148 149 4.277515 TCTGAATCAGACCCTGAACTTG 57.722 45.455 9.18 0.00 44.04 3.16
158 159 5.445761 TCGTACTCCGAGTCTGAATCAGAC 61.446 50.000 30.21 30.21 45.97 3.51
159 160 2.937149 CGTACTCCGAGTCTGAATCAGA 59.063 50.000 9.18 9.18 37.10 3.27
160 161 2.937149 TCGTACTCCGAGTCTGAATCAG 59.063 50.000 3.74 3.38 41.60 2.90
161 162 2.981898 TCGTACTCCGAGTCTGAATCA 58.018 47.619 3.74 0.00 41.60 2.57
171 172 5.649782 AAGACCTTAAATTCGTACTCCGA 57.350 39.130 0.00 0.00 45.66 4.55
172 173 6.716898 AAAAGACCTTAAATTCGTACTCCG 57.283 37.500 0.00 0.00 38.13 4.63
173 174 8.091385 TGAAAAAGACCTTAAATTCGTACTCC 57.909 34.615 0.00 0.00 0.00 3.85
174 175 8.985805 TCTGAAAAAGACCTTAAATTCGTACTC 58.014 33.333 0.00 0.00 0.00 2.59
175 176 8.897872 TCTGAAAAAGACCTTAAATTCGTACT 57.102 30.769 0.00 0.00 0.00 2.73
190 191 5.659440 AAGTGGCAAAAGTCTGAAAAAGA 57.341 34.783 0.00 0.00 0.00 2.52
191 192 5.979517 CCTAAGTGGCAAAAGTCTGAAAAAG 59.020 40.000 0.00 0.00 0.00 2.27
192 193 5.654650 TCCTAAGTGGCAAAAGTCTGAAAAA 59.345 36.000 0.00 0.00 35.26 1.94
193 194 5.197451 TCCTAAGTGGCAAAAGTCTGAAAA 58.803 37.500 0.00 0.00 35.26 2.29
194 195 4.787551 TCCTAAGTGGCAAAAGTCTGAAA 58.212 39.130 0.00 0.00 35.26 2.69
195 196 4.431416 TCCTAAGTGGCAAAAGTCTGAA 57.569 40.909 0.00 0.00 35.26 3.02
196 197 4.640771 ATCCTAAGTGGCAAAAGTCTGA 57.359 40.909 0.00 0.00 35.26 3.27
197 198 6.206634 TGTTAATCCTAAGTGGCAAAAGTCTG 59.793 38.462 0.00 0.00 35.26 3.51
198 199 6.303839 TGTTAATCCTAAGTGGCAAAAGTCT 58.696 36.000 0.00 0.00 35.26 3.24
199 200 6.569179 TGTTAATCCTAAGTGGCAAAAGTC 57.431 37.500 0.00 0.00 35.26 3.01
200 201 6.969993 TTGTTAATCCTAAGTGGCAAAAGT 57.030 33.333 0.00 0.00 35.26 2.66
201 202 7.206687 TGTTTGTTAATCCTAAGTGGCAAAAG 58.793 34.615 0.00 0.00 35.26 2.27
202 203 7.113658 TGTTTGTTAATCCTAAGTGGCAAAA 57.886 32.000 0.00 0.00 35.26 2.44
203 204 6.716934 TGTTTGTTAATCCTAAGTGGCAAA 57.283 33.333 0.00 0.00 35.26 3.68
204 205 6.716934 TTGTTTGTTAATCCTAAGTGGCAA 57.283 33.333 0.00 0.00 35.26 4.52
205 206 5.278758 GCTTGTTTGTTAATCCTAAGTGGCA 60.279 40.000 0.00 0.00 35.26 4.92
206 207 5.161358 GCTTGTTTGTTAATCCTAAGTGGC 58.839 41.667 0.00 0.00 35.26 5.01
207 208 5.242838 TGGCTTGTTTGTTAATCCTAAGTGG 59.757 40.000 0.00 0.00 37.10 4.00
208 209 6.325919 TGGCTTGTTTGTTAATCCTAAGTG 57.674 37.500 0.00 0.00 0.00 3.16
209 210 6.516693 GCTTGGCTTGTTTGTTAATCCTAAGT 60.517 38.462 0.00 0.00 0.00 2.24
210 211 5.863935 GCTTGGCTTGTTTGTTAATCCTAAG 59.136 40.000 0.00 0.00 0.00 2.18
211 212 5.279256 GGCTTGGCTTGTTTGTTAATCCTAA 60.279 40.000 0.00 0.00 0.00 2.69
212 213 4.219725 GGCTTGGCTTGTTTGTTAATCCTA 59.780 41.667 0.00 0.00 0.00 2.94
213 214 3.006859 GGCTTGGCTTGTTTGTTAATCCT 59.993 43.478 0.00 0.00 0.00 3.24
214 215 3.325870 GGCTTGGCTTGTTTGTTAATCC 58.674 45.455 0.00 0.00 0.00 3.01
433 598 9.854668 ACACTTAATCTGTTCTAGAGATAGCTA 57.145 33.333 0.00 0.00 39.20 3.32
434 599 8.629158 CACACTTAATCTGTTCTAGAGATAGCT 58.371 37.037 0.00 0.00 39.20 3.32
435 600 8.625651 TCACACTTAATCTGTTCTAGAGATAGC 58.374 37.037 0.00 0.00 39.20 2.97
454 619 8.046708 TGCCTGTAGAAACATTATATCACACTT 58.953 33.333 0.00 0.00 34.37 3.16
504 688 5.574830 CGACTCAGTAACTTTCTTGATCTGG 59.425 44.000 0.00 0.00 0.00 3.86
513 697 4.769859 ACTCCTCGACTCAGTAACTTTC 57.230 45.455 0.00 0.00 0.00 2.62
537 725 7.397892 TCAATTCTTCTGTGTGTGGTAAAAA 57.602 32.000 0.00 0.00 0.00 1.94
549 737 7.566569 ACTCATGATCTGATCAATTCTTCTGT 58.433 34.615 22.91 10.97 43.50 3.41
588 927 1.572085 CGCCTGGAAGCTCACAAGTG 61.572 60.000 0.00 0.00 0.00 3.16
590 929 2.037136 CCGCCTGGAAGCTCACAAG 61.037 63.158 0.00 0.00 37.49 3.16
591 930 2.032528 CCGCCTGGAAGCTCACAA 59.967 61.111 0.00 0.00 37.49 3.33
607 946 1.228245 TTGAAGGTGACAGCCAGCC 60.228 57.895 0.00 0.00 44.01 4.85
697 1037 2.031857 GCGATAACCACTAGACCGAGAG 60.032 54.545 0.00 0.00 0.00 3.20
700 1040 1.027357 GGCGATAACCACTAGACCGA 58.973 55.000 0.00 0.00 0.00 4.69
722 1062 1.591504 ATTAACCCAGCCGCGTTTGG 61.592 55.000 16.70 16.70 0.00 3.28
824 1178 2.830370 GGGAATGGGCTTGCCGAG 60.830 66.667 5.49 0.00 35.44 4.63
846 1200 3.367087 GGTCGAAGCTAGCTGTTGTTCTA 60.367 47.826 20.16 0.29 0.00 2.10
848 1202 1.727335 GGTCGAAGCTAGCTGTTGTTC 59.273 52.381 20.16 10.72 0.00 3.18
863 1217 4.016851 AGGGGGTGCTTATATATAGGTCGA 60.017 45.833 4.02 0.00 0.00 4.20
885 1239 2.830370 GGGAATGGGCTTGCCGAG 60.830 66.667 5.49 0.00 35.44 4.63
895 1249 1.676006 GTTGTTCTATGCCGGGAATGG 59.324 52.381 0.00 0.00 0.00 3.16
907 1261 3.370527 GGAATGGGCTAGCTGTTGTTCTA 60.371 47.826 15.72 0.00 0.00 2.10
923 1277 2.026356 TGGTGATATATGCCGGGAATGG 60.026 50.000 0.00 0.00 0.00 3.16
924 1278 3.009723 GTGGTGATATATGCCGGGAATG 58.990 50.000 0.00 0.00 0.00 2.67
925 1279 2.026262 GGTGGTGATATATGCCGGGAAT 60.026 50.000 0.00 0.00 0.00 3.01
926 1280 1.349688 GGTGGTGATATATGCCGGGAA 59.650 52.381 0.00 0.00 0.00 3.97
930 1284 1.798223 CGTTGGTGGTGATATATGCCG 59.202 52.381 0.00 0.00 0.00 5.69
932 1286 2.032030 GTGCGTTGGTGGTGATATATGC 60.032 50.000 0.00 0.00 0.00 3.14
933 1287 3.202097 TGTGCGTTGGTGGTGATATATG 58.798 45.455 0.00 0.00 0.00 1.78
935 1289 2.498078 TCTGTGCGTTGGTGGTGATATA 59.502 45.455 0.00 0.00 0.00 0.86
936 1290 1.277842 TCTGTGCGTTGGTGGTGATAT 59.722 47.619 0.00 0.00 0.00 1.63
937 1291 0.682292 TCTGTGCGTTGGTGGTGATA 59.318 50.000 0.00 0.00 0.00 2.15
938 1292 0.603707 CTCTGTGCGTTGGTGGTGAT 60.604 55.000 0.00 0.00 0.00 3.06
939 1293 1.227527 CTCTGTGCGTTGGTGGTGA 60.228 57.895 0.00 0.00 0.00 4.02
942 1296 0.320683 TGATCTCTGTGCGTTGGTGG 60.321 55.000 0.00 0.00 0.00 4.61
955 1309 3.540314 AAGCTGTGATGAGGTGATCTC 57.460 47.619 0.00 0.00 42.74 2.75
1112 1525 1.078848 GAGGAAGATGGTGTGCGCT 60.079 57.895 9.73 0.00 0.00 5.92
1121 1534 4.141551 TGACATGGATCAAGGAGGAAGATG 60.142 45.833 0.00 0.00 0.00 2.90
1124 3410 3.920231 TGACATGGATCAAGGAGGAAG 57.080 47.619 0.00 0.00 0.00 3.46
1126 3412 3.387012 TCATGACATGGATCAAGGAGGA 58.613 45.455 15.37 0.00 30.82 3.71
1133 3444 1.417145 TGGCGATCATGACATGGATCA 59.583 47.619 15.37 5.02 39.88 2.92
1137 3448 0.107268 TCCTGGCGATCATGACATGG 59.893 55.000 15.37 0.90 0.00 3.66
1144 3455 3.134623 TGAGTATGTTTCCTGGCGATCAT 59.865 43.478 0.00 0.00 0.00 2.45
1183 3518 6.998258 GCAACCTGCATTCAAATCATATAC 57.002 37.500 0.00 0.00 44.26 1.47
1484 3819 4.988598 CGTTGAGGTGCCAGCCGT 62.989 66.667 0.00 0.00 0.00 5.68
1574 3918 4.397103 CACATAGAGCAAGGCATTGAGAAA 59.603 41.667 16.56 0.00 38.83 2.52
1576 3920 3.054875 ACACATAGAGCAAGGCATTGAGA 60.055 43.478 16.56 0.00 38.83 3.27
1594 3938 4.649674 GGATACTCATACTCCCTTCACACA 59.350 45.833 0.00 0.00 0.00 3.72
1604 3954 5.105957 ACATGCTCGATGGATACTCATACTC 60.106 44.000 0.00 0.00 36.23 2.59
1605 3955 4.769488 ACATGCTCGATGGATACTCATACT 59.231 41.667 0.00 0.00 36.23 2.12
1606 3956 4.861462 CACATGCTCGATGGATACTCATAC 59.139 45.833 0.00 0.00 36.23 2.39
1607 3957 4.524328 ACACATGCTCGATGGATACTCATA 59.476 41.667 0.00 0.00 36.23 2.15
1608 3958 3.323115 ACACATGCTCGATGGATACTCAT 59.677 43.478 0.00 0.00 36.23 2.90
1609 3959 2.695147 ACACATGCTCGATGGATACTCA 59.305 45.455 0.00 0.00 36.23 3.41
1626 3976 0.107410 ACCAAGCACGAAGGAACACA 60.107 50.000 0.00 0.00 0.00 3.72
1699 4167 1.076332 GTACACACGTTCTGCCATCC 58.924 55.000 0.00 0.00 0.00 3.51
1718 4186 3.181521 TGAAATGCAGAGCGACATTAACG 60.182 43.478 0.00 0.00 35.49 3.18
1768 4236 2.358737 CAAAACGAGAGGCCGCCT 60.359 61.111 13.16 13.16 36.03 5.52
1770 4238 1.365699 TATTCAAAACGAGAGGCCGC 58.634 50.000 0.00 0.00 0.00 6.53
1794 4265 8.857098 TGTAGTATAAGGAATAGCAAAGACGAT 58.143 33.333 0.00 0.00 0.00 3.73
1799 4270 9.817809 TCAGTTGTAGTATAAGGAATAGCAAAG 57.182 33.333 0.00 0.00 0.00 2.77
1836 4310 5.674525 TCTCTACATGAATCGGCTGAATTT 58.325 37.500 0.00 0.00 0.00 1.82
1851 4326 2.159240 TGCGCATTCGTCTTCTCTACAT 60.159 45.455 5.66 0.00 38.14 2.29
1901 4376 2.035632 CTTACTCCCCTCTAGCAGTGG 58.964 57.143 0.00 0.00 0.00 4.00
1905 4380 2.853707 ACTCTCTTACTCCCCTCTAGCA 59.146 50.000 0.00 0.00 0.00 3.49
1951 7004 2.896854 CGGCACCGGTGATCATGG 60.897 66.667 38.30 14.77 35.56 3.66
1978 7031 0.616964 GGACGTCCCTCTAAACCCCT 60.617 60.000 24.75 0.00 0.00 4.79
2070 7126 2.046314 CCACCATCACCCGTGGTC 60.046 66.667 0.00 0.00 46.79 4.02
2131 7187 2.166459 CACTCATACGCCTTCCTCTTCA 59.834 50.000 0.00 0.00 0.00 3.02
2147 7203 1.881973 GCATCAGCCTTTTGTCACTCA 59.118 47.619 0.00 0.00 33.58 3.41
2154 7210 4.789012 TTTTCCTAGCATCAGCCTTTTG 57.211 40.909 0.00 0.00 43.56 2.44
2247 9978 1.454479 GGCAGTAGCATGGGCACAT 60.454 57.895 0.00 0.00 44.61 3.21
2256 9987 3.028850 ACCGTATTAGAAGGCAGTAGCA 58.971 45.455 0.00 0.00 44.61 3.49
2316 10076 6.713792 TTCGTTGAACATATTTGATCGTCA 57.286 33.333 0.00 0.00 0.00 4.35
2355 10115 8.564574 GTGAATGGTACTCTACAATTTTTGTGA 58.435 33.333 3.22 0.00 45.03 3.58
2372 10132 5.765677 TCATTTCAAACCGAAGTGAATGGTA 59.234 36.000 0.00 0.00 44.63 3.25
2373 10133 4.582656 TCATTTCAAACCGAAGTGAATGGT 59.417 37.500 0.00 0.00 44.63 3.55
2374 10134 5.119931 TCATTTCAAACCGAAGTGAATGG 57.880 39.130 0.00 0.00 44.63 3.16
2378 10138 6.142818 ACATTTCATTTCAAACCGAAGTGA 57.857 33.333 11.47 3.05 45.56 3.41
2379 10139 8.519492 AATACATTTCATTTCAAACCGAAGTG 57.481 30.769 5.53 5.53 41.46 3.16
2380 10140 9.191995 GAAATACATTTCATTTCAAACCGAAGT 57.808 29.630 9.33 0.00 44.19 3.01
2381 10141 8.647226 GGAAATACATTTCATTTCAAACCGAAG 58.353 33.333 14.80 0.00 46.03 3.79
2382 10142 7.600752 GGGAAATACATTTCATTTCAAACCGAA 59.399 33.333 14.80 0.00 46.03 4.30
2383 10143 7.093992 GGGAAATACATTTCATTTCAAACCGA 58.906 34.615 14.80 0.00 46.03 4.69
2384 10144 6.870965 TGGGAAATACATTTCATTTCAAACCG 59.129 34.615 14.80 0.00 46.03 4.44
2385 10145 8.503196 GTTGGGAAATACATTTCATTTCAAACC 58.497 33.333 14.80 6.32 46.03 3.27
2386 10146 9.050601 TGTTGGGAAATACATTTCATTTCAAAC 57.949 29.630 14.80 11.64 46.03 2.93
2387 10147 9.270640 CTGTTGGGAAATACATTTCATTTCAAA 57.729 29.630 14.80 2.20 46.03 2.69
2388 10148 8.428063 ACTGTTGGGAAATACATTTCATTTCAA 58.572 29.630 14.80 10.51 46.03 2.69
2389 10149 7.871973 CACTGTTGGGAAATACATTTCATTTCA 59.128 33.333 14.80 8.47 46.03 2.69
2390 10150 7.872483 ACACTGTTGGGAAATACATTTCATTTC 59.128 33.333 14.80 0.00 46.03 2.17
2391 10151 7.734942 ACACTGTTGGGAAATACATTTCATTT 58.265 30.769 14.80 0.00 46.03 2.32
2392 10152 7.301868 ACACTGTTGGGAAATACATTTCATT 57.698 32.000 14.80 0.00 46.03 2.57
2393 10153 6.916360 ACACTGTTGGGAAATACATTTCAT 57.084 33.333 14.80 0.00 46.03 2.57
2394 10154 7.825331 TTACACTGTTGGGAAATACATTTCA 57.175 32.000 14.80 0.00 46.03 2.69
2395 10155 9.705290 AAATTACACTGTTGGGAAATACATTTC 57.295 29.630 6.20 6.20 44.08 2.17
2402 10162 8.421002 GCCATATAAATTACACTGTTGGGAAAT 58.579 33.333 0.00 0.00 0.00 2.17
2403 10163 7.397476 TGCCATATAAATTACACTGTTGGGAAA 59.603 33.333 0.00 0.00 0.00 3.13
2404 10164 6.892456 TGCCATATAAATTACACTGTTGGGAA 59.108 34.615 0.00 0.00 0.00 3.97
2405 10165 6.427441 TGCCATATAAATTACACTGTTGGGA 58.573 36.000 0.00 0.00 0.00 4.37
2406 10166 6.707440 TGCCATATAAATTACACTGTTGGG 57.293 37.500 0.00 0.00 0.00 4.12
2407 10167 6.690957 CGTTGCCATATAAATTACACTGTTGG 59.309 38.462 0.00 0.00 0.00 3.77
2408 10168 7.468441 TCGTTGCCATATAAATTACACTGTTG 58.532 34.615 0.00 0.00 0.00 3.33
2409 10169 7.618502 TCGTTGCCATATAAATTACACTGTT 57.381 32.000 0.00 0.00 0.00 3.16
2410 10170 7.618502 TTCGTTGCCATATAAATTACACTGT 57.381 32.000 0.00 0.00 0.00 3.55
2411 10171 9.515020 AAATTCGTTGCCATATAAATTACACTG 57.485 29.630 0.00 0.00 0.00 3.66
2436 10196 9.906660 CGCCTAAAAGATTGGCAATATATTTAA 57.093 29.630 13.65 4.15 46.39 1.52
2437 10197 8.026607 GCGCCTAAAAGATTGGCAATATATTTA 58.973 33.333 13.65 15.78 46.39 1.40
2438 10198 6.868339 GCGCCTAAAAGATTGGCAATATATTT 59.132 34.615 13.65 15.52 46.39 1.40
2439 10199 6.389906 GCGCCTAAAAGATTGGCAATATATT 58.610 36.000 13.65 10.36 46.39 1.28
2440 10200 5.105756 GGCGCCTAAAAGATTGGCAATATAT 60.106 40.000 22.15 5.56 46.39 0.86
2441 10201 4.217550 GGCGCCTAAAAGATTGGCAATATA 59.782 41.667 22.15 3.84 46.39 0.86
2442 10202 3.005791 GGCGCCTAAAAGATTGGCAATAT 59.994 43.478 22.15 7.20 46.39 1.28
2443 10203 2.360801 GGCGCCTAAAAGATTGGCAATA 59.639 45.455 22.15 0.00 46.39 1.90
2444 10204 1.136891 GGCGCCTAAAAGATTGGCAAT 59.863 47.619 22.15 13.54 46.39 3.56
2445 10205 0.530288 GGCGCCTAAAAGATTGGCAA 59.470 50.000 22.15 0.68 46.39 4.52
2446 10206 1.653094 CGGCGCCTAAAAGATTGGCA 61.653 55.000 26.68 0.00 46.39 4.92
2447 10207 1.064134 CGGCGCCTAAAAGATTGGC 59.936 57.895 26.68 0.00 42.94 4.52
2448 10208 0.098728 CACGGCGCCTAAAAGATTGG 59.901 55.000 26.68 7.01 0.00 3.16
2449 10209 0.802494 ACACGGCGCCTAAAAGATTG 59.198 50.000 26.68 7.84 0.00 2.67
2450 10210 2.389962 TACACGGCGCCTAAAAGATT 57.610 45.000 26.68 3.42 0.00 2.40
2451 10211 2.389962 TTACACGGCGCCTAAAAGAT 57.610 45.000 26.68 5.15 0.00 2.40
2452 10212 2.166821 TTTACACGGCGCCTAAAAGA 57.833 45.000 26.68 3.34 0.00 2.52
2453 10213 3.866910 TCTATTTACACGGCGCCTAAAAG 59.133 43.478 26.68 18.92 0.00 2.27
2454 10214 3.859443 TCTATTTACACGGCGCCTAAAA 58.141 40.909 26.68 18.27 0.00 1.52
2455 10215 3.450578 CTCTATTTACACGGCGCCTAAA 58.549 45.455 26.68 21.80 0.00 1.85
2456 10216 2.800629 GCTCTATTTACACGGCGCCTAA 60.801 50.000 26.68 13.90 0.00 2.69
2457 10217 1.269413 GCTCTATTTACACGGCGCCTA 60.269 52.381 26.68 7.43 0.00 3.93
2458 10218 0.529992 GCTCTATTTACACGGCGCCT 60.530 55.000 26.68 8.66 0.00 5.52
2459 10219 1.496403 GGCTCTATTTACACGGCGCC 61.496 60.000 19.07 19.07 0.00 6.53
2460 10220 1.818221 CGGCTCTATTTACACGGCGC 61.818 60.000 6.90 0.00 36.88 6.53
2461 10221 1.213094 CCGGCTCTATTTACACGGCG 61.213 60.000 4.80 4.80 42.30 6.46
2462 10222 0.103572 TCCGGCTCTATTTACACGGC 59.896 55.000 0.00 0.00 40.99 5.68
2463 10223 1.407979 ACTCCGGCTCTATTTACACGG 59.592 52.381 0.00 0.00 42.45 4.94
2464 10224 2.865343 ACTCCGGCTCTATTTACACG 57.135 50.000 0.00 0.00 0.00 4.49
2465 10225 5.695363 GGAATTACTCCGGCTCTATTTACAC 59.305 44.000 0.00 0.00 33.37 2.90
2466 10226 5.850614 GGAATTACTCCGGCTCTATTTACA 58.149 41.667 0.00 0.00 33.37 2.41
2479 10239 3.522343 ACACCCAGGTTAGGAATTACTCC 59.478 47.826 0.00 0.00 45.81 3.85
2480 10240 4.383880 GGACACCCAGGTTAGGAATTACTC 60.384 50.000 0.00 0.00 0.00 2.59
2481 10241 3.522343 GGACACCCAGGTTAGGAATTACT 59.478 47.826 0.00 0.00 0.00 2.24
2482 10242 3.264964 TGGACACCCAGGTTAGGAATTAC 59.735 47.826 0.00 0.00 37.58 1.89
2483 10243 3.533146 TGGACACCCAGGTTAGGAATTA 58.467 45.455 0.00 0.00 37.58 1.40
2484 10244 2.354328 TGGACACCCAGGTTAGGAATT 58.646 47.619 0.00 0.00 37.58 2.17
2485 10245 2.053747 TGGACACCCAGGTTAGGAAT 57.946 50.000 0.00 0.00 37.58 3.01
2486 10246 3.581437 TGGACACCCAGGTTAGGAA 57.419 52.632 0.00 0.00 37.58 3.36
2496 10256 2.301346 GACAATCATGGATGGACACCC 58.699 52.381 0.00 0.00 0.00 4.61
2497 10257 1.942657 CGACAATCATGGATGGACACC 59.057 52.381 0.00 0.00 0.00 4.16
2498 10258 2.868583 CTCGACAATCATGGATGGACAC 59.131 50.000 0.00 0.00 0.00 3.67
2499 10259 2.742856 GCTCGACAATCATGGATGGACA 60.743 50.000 0.00 0.00 0.00 4.02
2500 10260 1.869767 GCTCGACAATCATGGATGGAC 59.130 52.381 0.00 0.00 0.00 4.02
2501 10261 1.202687 GGCTCGACAATCATGGATGGA 60.203 52.381 0.00 0.00 0.00 3.41
2502 10262 1.233019 GGCTCGACAATCATGGATGG 58.767 55.000 0.00 0.00 0.00 3.51
2503 10263 1.233019 GGGCTCGACAATCATGGATG 58.767 55.000 0.00 0.00 0.00 3.51
2504 10264 0.839277 TGGGCTCGACAATCATGGAT 59.161 50.000 0.00 0.00 0.00 3.41
2505 10265 0.107703 GTGGGCTCGACAATCATGGA 60.108 55.000 0.00 0.00 0.00 3.41
2506 10266 1.431488 CGTGGGCTCGACAATCATGG 61.431 60.000 0.00 0.00 0.00 3.66
2507 10267 1.431488 CCGTGGGCTCGACAATCATG 61.431 60.000 4.48 0.00 0.00 3.07
2508 10268 1.153369 CCGTGGGCTCGACAATCAT 60.153 57.895 4.48 0.00 0.00 2.45
2509 10269 2.264480 CCGTGGGCTCGACAATCA 59.736 61.111 4.48 0.00 0.00 2.57
2510 10270 1.810030 GACCGTGGGCTCGACAATC 60.810 63.158 4.48 0.00 0.00 2.67
2511 10271 1.827399 AAGACCGTGGGCTCGACAAT 61.827 55.000 0.00 0.00 0.00 2.71
2512 10272 2.430382 GAAGACCGTGGGCTCGACAA 62.430 60.000 0.00 0.00 0.00 3.18
2513 10273 2.915659 AAGACCGTGGGCTCGACA 60.916 61.111 0.00 0.00 0.00 4.35
2514 10274 2.126031 GAAGACCGTGGGCTCGAC 60.126 66.667 0.00 0.00 0.00 4.20
2515 10275 3.379445 GGAAGACCGTGGGCTCGA 61.379 66.667 0.00 0.00 0.00 4.04
2516 10276 4.452733 GGGAAGACCGTGGGCTCG 62.453 72.222 0.00 0.00 36.97 5.03
2517 10277 1.262640 TTAGGGAAGACCGTGGGCTC 61.263 60.000 0.00 0.00 46.96 4.70
2518 10278 0.620700 ATTAGGGAAGACCGTGGGCT 60.621 55.000 0.00 0.00 46.96 5.19
2519 10279 0.463833 CATTAGGGAAGACCGTGGGC 60.464 60.000 0.00 0.00 46.96 5.36
2520 10280 0.180406 CCATTAGGGAAGACCGTGGG 59.820 60.000 0.00 0.00 46.96 4.61
2521 10281 1.200519 TCCATTAGGGAAGACCGTGG 58.799 55.000 0.00 0.00 44.80 4.94
2531 10291 0.469917 ACCAGCGACATCCATTAGGG 59.530 55.000 0.00 0.00 34.83 3.53
2532 10292 2.332063 AACCAGCGACATCCATTAGG 57.668 50.000 0.00 0.00 0.00 2.69
2533 10293 4.396166 AGAAAAACCAGCGACATCCATTAG 59.604 41.667 0.00 0.00 0.00 1.73
2534 10294 4.331968 AGAAAAACCAGCGACATCCATTA 58.668 39.130 0.00 0.00 0.00 1.90
2535 10295 3.157087 AGAAAAACCAGCGACATCCATT 58.843 40.909 0.00 0.00 0.00 3.16
2536 10296 2.795329 AGAAAAACCAGCGACATCCAT 58.205 42.857 0.00 0.00 0.00 3.41
2537 10297 2.270352 AGAAAAACCAGCGACATCCA 57.730 45.000 0.00 0.00 0.00 3.41
2538 10298 3.643159 AAAGAAAAACCAGCGACATCC 57.357 42.857 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.