Multiple sequence alignment - TraesCS5D01G506200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G506200 chr5D 100.000 5675 0 0 1 5675 531998842 531993168 0.000000e+00 10480.0
1 TraesCS5D01G506200 chr5D 84.988 413 46 7 4098 4500 531974064 531973658 6.850000e-109 405.0
2 TraesCS5D01G506200 chr5D 88.827 179 18 2 2124 2301 531996518 531996341 9.570000e-53 219.0
3 TraesCS5D01G506200 chr5D 88.827 179 18 2 2325 2502 531996719 531996542 9.570000e-53 219.0
4 TraesCS5D01G506200 chr5D 98.113 53 1 0 2544 2596 531996219 531996167 6.050000e-15 93.5
5 TraesCS5D01G506200 chr5D 98.113 53 1 0 2624 2676 531996299 531996247 6.050000e-15 93.5
6 TraesCS5D01G506200 chr5B 90.464 3020 143 48 522 3428 671197454 671194467 0.000000e+00 3847.0
7 TraesCS5D01G506200 chr5B 94.405 2252 90 14 3436 5675 671193988 671191761 0.000000e+00 3428.0
8 TraesCS5D01G506200 chr5B 88.350 206 12 8 2124 2327 671195582 671195387 2.640000e-58 237.0
9 TraesCS5D01G506200 chr5B 90.741 162 14 1 2325 2485 671195783 671195622 1.240000e-51 215.0
10 TraesCS5D01G506200 chr5B 87.129 101 12 1 3886 3985 671190380 671190280 4.650000e-21 113.0
11 TraesCS5D01G506200 chr4A 91.953 1802 93 23 3323 5088 640215083 640216868 0.000000e+00 2477.0
12 TraesCS5D01G506200 chr4A 94.704 963 41 5 2325 3284 640214134 640215089 0.000000e+00 1487.0
13 TraesCS5D01G506200 chr4A 88.433 1072 68 24 1290 2324 640213273 640214325 0.000000e+00 1242.0
14 TraesCS5D01G506200 chr4A 85.328 518 26 29 739 1239 640212378 640212862 1.840000e-134 490.0
15 TraesCS5D01G506200 chr4A 84.821 112 9 7 3196 3301 449817774 449817665 7.780000e-19 106.0
16 TraesCS5D01G506200 chr4A 98.113 53 1 0 2544 2596 640214435 640214487 6.050000e-15 93.5
17 TraesCS5D01G506200 chr4A 100.000 31 0 0 3946 3976 640216927 640216897 2.210000e-04 58.4
18 TraesCS5D01G506200 chr7D 88.798 491 51 2 30 517 251355308 251354819 2.930000e-167 599.0
19 TraesCS5D01G506200 chr7D 89.189 481 47 3 30 507 133887077 133887555 3.790000e-166 595.0
20 TraesCS5D01G506200 chr7D 81.174 494 82 8 5190 5675 635663064 635663554 2.480000e-103 387.0
21 TraesCS5D01G506200 chr7D 91.209 91 8 0 3197 3287 506006952 506007042 2.150000e-24 124.0
22 TraesCS5D01G506200 chr4D 88.773 481 52 2 30 509 42574124 42574603 6.330000e-164 588.0
23 TraesCS5D01G506200 chr4D 88.382 482 50 4 30 508 421546110 421546588 4.930000e-160 575.0
24 TraesCS5D01G506200 chr4D 88.285 478 52 4 30 507 51845380 51844907 2.290000e-158 569.0
25 TraesCS5D01G506200 chr4D 80.606 495 86 8 5187 5673 397696619 397697111 1.930000e-99 374.0
26 TraesCS5D01G506200 chr2D 88.703 478 53 1 30 507 608722568 608723044 2.950000e-162 582.0
27 TraesCS5D01G506200 chr2D 81.707 492 76 9 5190 5673 131775052 131775537 1.150000e-106 398.0
28 TraesCS5D01G506200 chr6D 88.017 484 53 3 30 510 389599147 389598666 8.250000e-158 568.0
29 TraesCS5D01G506200 chr7A 88.486 469 50 2 30 495 393325272 393325739 1.070000e-156 564.0
30 TraesCS5D01G506200 chr7A 93.827 81 5 0 3197 3277 279180091 279180171 7.720000e-24 122.0
31 TraesCS5D01G506200 chr6B 87.992 483 51 5 30 508 508533317 508532838 1.070000e-156 564.0
32 TraesCS5D01G506200 chr2A 82.222 495 77 8 5190 5675 2742366 2741874 3.160000e-112 416.0
33 TraesCS5D01G506200 chr2A 81.705 481 80 8 5190 5663 768317070 768317549 1.480000e-105 394.0
34 TraesCS5D01G506200 chr3B 81.250 496 82 6 5190 5675 186089077 186089571 1.920000e-104 390.0
35 TraesCS5D01G506200 chr3B 79.304 517 94 7 5166 5675 12765704 12765194 3.250000e-92 350.0
36 TraesCS5D01G506200 chr3D 80.354 509 90 8 5166 5667 350858770 350859275 1.490000e-100 377.0
37 TraesCS5D01G506200 chr3D 87.500 96 12 0 3196 3291 445019037 445019132 1.670000e-20 111.0
38 TraesCS5D01G506200 chr1D 91.398 93 8 0 3195 3287 338872381 338872473 1.660000e-25 128.0
39 TraesCS5D01G506200 chr2B 89.362 94 10 0 3194 3287 164904155 164904248 9.990000e-23 119.0
40 TraesCS5D01G506200 chr5A 87.129 101 13 0 3197 3297 482125603 482125503 1.290000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G506200 chr5D 531993168 531998842 5674 True 2221.0 10480 94.7760 1 5675 5 chr5D.!!$R2 5674
1 TraesCS5D01G506200 chr5B 671190280 671197454 7174 True 1568.0 3847 90.2178 522 5675 5 chr5B.!!$R1 5153
2 TraesCS5D01G506200 chr4A 640212378 640216868 4490 False 1157.9 2477 91.7062 739 5088 5 chr4A.!!$F1 4349
3 TraesCS5D01G506200 chr3B 12765194 12765704 510 True 350.0 350 79.3040 5166 5675 1 chr3B.!!$R1 509
4 TraesCS5D01G506200 chr3D 350858770 350859275 505 False 377.0 377 80.3540 5166 5667 1 chr3D.!!$F1 501

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
692 696 0.178068 GGTCTAATCGAAGCTGCCCA 59.822 55.000 0.00 0.0 0.00 5.36 F
1405 1867 0.538746 CAGGTACCCCAACCAACACC 60.539 60.000 8.74 0.0 42.40 4.16 F
1406 1868 0.699922 AGGTACCCCAACCAACACCT 60.700 55.000 8.74 0.0 42.40 4.00 F
1803 2312 0.981183 TTTCTGTACGACAGGGGCAT 59.019 50.000 12.89 0.0 45.94 4.40 F
2818 3339 2.066262 TCGATCAGAAAAGCCGTCAAC 58.934 47.619 0.00 0.0 0.00 3.18 F
4046 5048 0.322816 ACTTGGTGCATGTAGGGCTG 60.323 55.000 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1765 2274 0.466189 AGGCGCATCCCATCGATTTT 60.466 50.000 10.83 0.00 34.51 1.82 R
2383 2898 2.383855 AGGCCAAGTGCTGTTGTTTAA 58.616 42.857 5.01 0.00 40.92 1.52 R
2851 3372 3.117663 GGCCATCACTTAAATGGGGAGTA 60.118 47.826 0.00 0.00 43.32 2.59 R
3434 3965 3.243434 GCAGGAGGCTGAATCAAATGATG 60.243 47.826 0.00 0.00 40.25 3.07 R
4415 5423 0.178068 TCTCAGAAGTTATGGCGCCC 59.822 55.000 26.77 8.39 0.00 6.13 R
5625 6680 0.034186 TCATCGGAGCTGGGCAAATT 60.034 50.000 0.00 0.00 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 4.911514 TTTAAAGAGGTTTGTGTCCTGC 57.088 40.909 0.00 0.00 35.20 4.85
43 44 2.736670 AAAGAGGTTTGTGTCCTGCT 57.263 45.000 0.00 0.00 35.20 4.24
44 45 2.736670 AAGAGGTTTGTGTCCTGCTT 57.263 45.000 0.00 0.00 35.20 3.91
45 46 3.857157 AAGAGGTTTGTGTCCTGCTTA 57.143 42.857 0.00 0.00 35.20 3.09
46 47 3.409026 AGAGGTTTGTGTCCTGCTTAG 57.591 47.619 0.00 0.00 35.20 2.18
47 48 2.039084 AGAGGTTTGTGTCCTGCTTAGG 59.961 50.000 0.00 0.00 35.20 2.69
48 49 2.038557 GAGGTTTGTGTCCTGCTTAGGA 59.961 50.000 0.00 0.00 35.20 2.94
49 50 2.441750 AGGTTTGTGTCCTGCTTAGGAA 59.558 45.455 0.00 0.00 40.06 3.36
50 51 2.814336 GGTTTGTGTCCTGCTTAGGAAG 59.186 50.000 0.00 0.00 40.06 3.46
51 52 2.814336 GTTTGTGTCCTGCTTAGGAAGG 59.186 50.000 0.00 0.00 40.06 3.46
52 53 0.324943 TGTGTCCTGCTTAGGAAGGC 59.675 55.000 0.00 0.00 38.19 4.35
53 54 0.741221 GTGTCCTGCTTAGGAAGGCG 60.741 60.000 0.00 0.00 38.19 5.52
54 55 0.902984 TGTCCTGCTTAGGAAGGCGA 60.903 55.000 0.00 0.00 38.19 5.54
55 56 0.179097 GTCCTGCTTAGGAAGGCGAG 60.179 60.000 0.00 0.00 38.19 5.03
56 57 0.324368 TCCTGCTTAGGAAGGCGAGA 60.324 55.000 0.00 0.00 38.19 4.04
57 58 0.179097 CCTGCTTAGGAAGGCGAGAC 60.179 60.000 0.00 0.00 30.26 3.36
58 59 0.526524 CTGCTTAGGAAGGCGAGACG 60.527 60.000 0.00 0.00 0.00 4.18
59 60 1.227002 GCTTAGGAAGGCGAGACGG 60.227 63.158 0.00 0.00 0.00 4.79
60 61 1.946475 GCTTAGGAAGGCGAGACGGT 61.946 60.000 0.00 0.00 0.00 4.83
61 62 0.179134 CTTAGGAAGGCGAGACGGTG 60.179 60.000 0.00 0.00 0.00 4.94
62 63 1.601419 TTAGGAAGGCGAGACGGTGG 61.601 60.000 0.00 0.00 0.00 4.61
75 76 4.785453 GGTGGCGGCTCCCTGAAG 62.785 72.222 18.61 0.00 0.00 3.02
76 77 3.706373 GTGGCGGCTCCCTGAAGA 61.706 66.667 11.43 0.00 0.00 2.87
77 78 2.688666 TGGCGGCTCCCTGAAGAT 60.689 61.111 11.43 0.00 0.00 2.40
78 79 2.203126 GGCGGCTCCCTGAAGATG 60.203 66.667 0.00 0.00 0.00 2.90
79 80 2.203126 GCGGCTCCCTGAAGATGG 60.203 66.667 0.00 0.00 0.00 3.51
80 81 2.735772 GCGGCTCCCTGAAGATGGA 61.736 63.158 0.00 0.00 0.00 3.41
81 82 1.907739 CGGCTCCCTGAAGATGGAA 59.092 57.895 0.00 0.00 0.00 3.53
82 83 0.471617 CGGCTCCCTGAAGATGGAAT 59.528 55.000 0.00 0.00 0.00 3.01
83 84 1.694150 CGGCTCCCTGAAGATGGAATA 59.306 52.381 0.00 0.00 0.00 1.75
84 85 2.104792 CGGCTCCCTGAAGATGGAATAA 59.895 50.000 0.00 0.00 0.00 1.40
85 86 3.749226 GGCTCCCTGAAGATGGAATAAG 58.251 50.000 0.00 0.00 0.00 1.73
86 87 3.497584 GGCTCCCTGAAGATGGAATAAGG 60.498 52.174 0.00 0.00 0.00 2.69
87 88 3.137360 GCTCCCTGAAGATGGAATAAGGT 59.863 47.826 0.00 0.00 0.00 3.50
88 89 4.745172 GCTCCCTGAAGATGGAATAAGGTC 60.745 50.000 0.00 0.00 0.00 3.85
89 90 3.716872 TCCCTGAAGATGGAATAAGGTCC 59.283 47.826 0.00 0.00 38.27 4.46
90 91 3.718956 CCCTGAAGATGGAATAAGGTCCT 59.281 47.826 0.00 0.00 38.62 3.85
91 92 4.166919 CCCTGAAGATGGAATAAGGTCCTT 59.833 45.833 9.62 9.62 38.62 3.36
92 93 5.372373 CCTGAAGATGGAATAAGGTCCTTC 58.628 45.833 7.61 0.00 40.53 3.46
93 94 5.372373 CTGAAGATGGAATAAGGTCCTTCC 58.628 45.833 7.61 4.09 40.92 3.46
94 95 4.166144 TGAAGATGGAATAAGGTCCTTCCC 59.834 45.833 7.61 8.84 40.92 3.97
95 96 2.706190 AGATGGAATAAGGTCCTTCCCG 59.294 50.000 7.61 0.00 40.92 5.14
96 97 0.544697 TGGAATAAGGTCCTTCCCGC 59.455 55.000 7.61 0.00 40.22 6.13
97 98 0.179026 GGAATAAGGTCCTTCCCGCC 60.179 60.000 7.61 2.30 35.83 6.13
98 99 0.837940 GAATAAGGTCCTTCCCGCCT 59.162 55.000 7.61 0.00 36.75 5.52
99 100 2.044758 GAATAAGGTCCTTCCCGCCTA 58.955 52.381 7.61 0.00 36.75 3.93
100 101 1.718280 ATAAGGTCCTTCCCGCCTAG 58.282 55.000 7.61 0.00 36.75 3.02
101 102 1.047034 TAAGGTCCTTCCCGCCTAGC 61.047 60.000 7.61 0.00 36.75 3.42
102 103 3.862991 GGTCCTTCCCGCCTAGCC 61.863 72.222 0.00 0.00 0.00 3.93
103 104 3.862991 GTCCTTCCCGCCTAGCCC 61.863 72.222 0.00 0.00 0.00 5.19
113 114 4.798682 CCTAGCCCCCGTCCTGGT 62.799 72.222 0.00 0.00 35.15 4.00
114 115 3.470888 CTAGCCCCCGTCCTGGTG 61.471 72.222 0.00 0.00 35.15 4.17
123 124 3.755628 GTCCTGGTGGCGCGTCTA 61.756 66.667 13.81 0.00 0.00 2.59
124 125 3.449227 TCCTGGTGGCGCGTCTAG 61.449 66.667 13.81 7.76 0.00 2.43
135 136 4.286967 CGTCTAGCATCGTCGGTG 57.713 61.111 0.00 0.00 0.00 4.94
136 137 1.298413 CGTCTAGCATCGTCGGTGG 60.298 63.158 7.76 0.00 0.00 4.61
137 138 1.065928 GTCTAGCATCGTCGGTGGG 59.934 63.158 7.76 0.00 0.00 4.61
138 139 2.279517 CTAGCATCGTCGGTGGGC 60.280 66.667 7.76 0.00 0.00 5.36
139 140 3.071837 TAGCATCGTCGGTGGGCA 61.072 61.111 7.76 0.00 0.00 5.36
140 141 2.369257 CTAGCATCGTCGGTGGGCAT 62.369 60.000 7.76 0.00 0.00 4.40
141 142 2.642996 TAGCATCGTCGGTGGGCATG 62.643 60.000 7.76 0.00 0.00 4.06
142 143 2.125147 CATCGTCGGTGGGCATGT 60.125 61.111 0.00 0.00 0.00 3.21
143 144 2.125147 ATCGTCGGTGGGCATGTG 60.125 61.111 0.00 0.00 0.00 3.21
144 145 3.680620 ATCGTCGGTGGGCATGTGG 62.681 63.158 0.00 0.00 0.00 4.17
145 146 4.386951 CGTCGGTGGGCATGTGGA 62.387 66.667 0.00 0.00 0.00 4.02
146 147 2.436646 GTCGGTGGGCATGTGGAG 60.437 66.667 0.00 0.00 0.00 3.86
147 148 3.716195 TCGGTGGGCATGTGGAGG 61.716 66.667 0.00 0.00 0.00 4.30
148 149 4.033776 CGGTGGGCATGTGGAGGT 62.034 66.667 0.00 0.00 0.00 3.85
149 150 2.361610 GGTGGGCATGTGGAGGTG 60.362 66.667 0.00 0.00 0.00 4.00
150 151 2.436109 GTGGGCATGTGGAGGTGT 59.564 61.111 0.00 0.00 0.00 4.16
151 152 1.973281 GTGGGCATGTGGAGGTGTG 60.973 63.158 0.00 0.00 0.00 3.82
152 153 2.436109 GGGCATGTGGAGGTGTGT 59.564 61.111 0.00 0.00 0.00 3.72
153 154 1.228552 GGGCATGTGGAGGTGTGTT 60.229 57.895 0.00 0.00 0.00 3.32
154 155 0.827507 GGGCATGTGGAGGTGTGTTT 60.828 55.000 0.00 0.00 0.00 2.83
155 156 0.598065 GGCATGTGGAGGTGTGTTTC 59.402 55.000 0.00 0.00 0.00 2.78
156 157 1.609208 GCATGTGGAGGTGTGTTTCT 58.391 50.000 0.00 0.00 0.00 2.52
157 158 1.267806 GCATGTGGAGGTGTGTTTCTG 59.732 52.381 0.00 0.00 0.00 3.02
158 159 1.881973 CATGTGGAGGTGTGTTTCTGG 59.118 52.381 0.00 0.00 0.00 3.86
159 160 0.916086 TGTGGAGGTGTGTTTCTGGT 59.084 50.000 0.00 0.00 0.00 4.00
160 161 1.308998 GTGGAGGTGTGTTTCTGGTG 58.691 55.000 0.00 0.00 0.00 4.17
161 162 0.182537 TGGAGGTGTGTTTCTGGTGG 59.817 55.000 0.00 0.00 0.00 4.61
162 163 0.472471 GGAGGTGTGTTTCTGGTGGA 59.528 55.000 0.00 0.00 0.00 4.02
163 164 1.073923 GGAGGTGTGTTTCTGGTGGAT 59.926 52.381 0.00 0.00 0.00 3.41
164 165 2.427506 GAGGTGTGTTTCTGGTGGATC 58.572 52.381 0.00 0.00 0.00 3.36
165 166 2.039084 GAGGTGTGTTTCTGGTGGATCT 59.961 50.000 0.00 0.00 0.00 2.75
166 167 3.248024 AGGTGTGTTTCTGGTGGATCTA 58.752 45.455 0.00 0.00 0.00 1.98
167 168 3.846588 AGGTGTGTTTCTGGTGGATCTAT 59.153 43.478 0.00 0.00 0.00 1.98
168 169 4.080863 AGGTGTGTTTCTGGTGGATCTATC 60.081 45.833 0.00 0.00 0.00 2.08
169 170 4.080863 GGTGTGTTTCTGGTGGATCTATCT 60.081 45.833 0.00 0.00 0.00 1.98
170 171 5.491982 GTGTGTTTCTGGTGGATCTATCTT 58.508 41.667 0.00 0.00 0.00 2.40
171 172 5.940470 GTGTGTTTCTGGTGGATCTATCTTT 59.060 40.000 0.00 0.00 0.00 2.52
172 173 5.939883 TGTGTTTCTGGTGGATCTATCTTTG 59.060 40.000 0.00 0.00 0.00 2.77
173 174 5.355350 GTGTTTCTGGTGGATCTATCTTTGG 59.645 44.000 0.00 0.00 0.00 3.28
174 175 5.014123 TGTTTCTGGTGGATCTATCTTTGGT 59.986 40.000 0.00 0.00 0.00 3.67
175 176 4.760530 TCTGGTGGATCTATCTTTGGTG 57.239 45.455 0.00 0.00 0.00 4.17
176 177 3.455910 TCTGGTGGATCTATCTTTGGTGG 59.544 47.826 0.00 0.00 0.00 4.61
177 178 3.455910 CTGGTGGATCTATCTTTGGTGGA 59.544 47.826 0.00 0.00 0.00 4.02
178 179 4.047166 TGGTGGATCTATCTTTGGTGGAT 58.953 43.478 0.00 0.00 0.00 3.41
179 180 4.103153 TGGTGGATCTATCTTTGGTGGATC 59.897 45.833 0.00 0.00 34.00 3.36
180 181 4.349342 GGTGGATCTATCTTTGGTGGATCT 59.651 45.833 4.62 0.00 34.83 2.75
181 182 5.303971 GTGGATCTATCTTTGGTGGATCTG 58.696 45.833 4.62 0.00 34.83 2.90
182 183 4.202398 TGGATCTATCTTTGGTGGATCTGC 60.202 45.833 4.62 0.00 34.83 4.26
183 184 4.041444 GGATCTATCTTTGGTGGATCTGCT 59.959 45.833 4.62 0.00 34.83 4.24
184 185 4.679373 TCTATCTTTGGTGGATCTGCTC 57.321 45.455 0.00 0.00 0.00 4.26
185 186 2.322355 ATCTTTGGTGGATCTGCTCG 57.678 50.000 0.00 0.00 0.00 5.03
186 187 0.250234 TCTTTGGTGGATCTGCTCGG 59.750 55.000 0.00 0.00 0.00 4.63
187 188 0.250234 CTTTGGTGGATCTGCTCGGA 59.750 55.000 0.00 0.00 0.00 4.55
188 189 0.911769 TTTGGTGGATCTGCTCGGAT 59.088 50.000 0.00 0.00 0.00 4.18
189 190 0.911769 TTGGTGGATCTGCTCGGATT 59.088 50.000 0.00 0.00 0.00 3.01
190 191 0.911769 TGGTGGATCTGCTCGGATTT 59.088 50.000 0.00 0.00 0.00 2.17
191 192 1.303309 GGTGGATCTGCTCGGATTTG 58.697 55.000 0.00 0.00 0.00 2.32
192 193 1.303309 GTGGATCTGCTCGGATTTGG 58.697 55.000 0.00 0.00 0.00 3.28
193 194 0.911769 TGGATCTGCTCGGATTTGGT 59.088 50.000 0.00 0.00 0.00 3.67
194 195 1.281867 TGGATCTGCTCGGATTTGGTT 59.718 47.619 0.00 0.00 0.00 3.67
195 196 1.672881 GGATCTGCTCGGATTTGGTTG 59.327 52.381 0.00 0.00 0.00 3.77
196 197 2.359900 GATCTGCTCGGATTTGGTTGT 58.640 47.619 0.00 0.00 0.00 3.32
197 198 2.270352 TCTGCTCGGATTTGGTTGTT 57.730 45.000 0.00 0.00 0.00 2.83
198 199 2.151202 TCTGCTCGGATTTGGTTGTTC 58.849 47.619 0.00 0.00 0.00 3.18
199 200 0.871722 TGCTCGGATTTGGTTGTTCG 59.128 50.000 0.00 0.00 0.00 3.95
200 201 0.872388 GCTCGGATTTGGTTGTTCGT 59.128 50.000 0.00 0.00 0.00 3.85
201 202 1.136057 GCTCGGATTTGGTTGTTCGTC 60.136 52.381 0.00 0.00 0.00 4.20
202 203 2.413837 CTCGGATTTGGTTGTTCGTCT 58.586 47.619 0.00 0.00 0.00 4.18
203 204 3.581755 CTCGGATTTGGTTGTTCGTCTA 58.418 45.455 0.00 0.00 0.00 2.59
204 205 3.319755 TCGGATTTGGTTGTTCGTCTAC 58.680 45.455 0.00 0.00 0.00 2.59
205 206 2.091588 CGGATTTGGTTGTTCGTCTACG 59.908 50.000 0.00 0.00 41.45 3.51
206 207 3.062042 GGATTTGGTTGTTCGTCTACGT 58.938 45.455 2.02 0.00 40.80 3.57
207 208 3.495753 GGATTTGGTTGTTCGTCTACGTT 59.504 43.478 0.00 0.00 40.80 3.99
208 209 4.376717 GGATTTGGTTGTTCGTCTACGTTC 60.377 45.833 0.00 0.00 40.80 3.95
209 210 1.757574 TGGTTGTTCGTCTACGTTCG 58.242 50.000 0.00 0.00 40.80 3.95
210 211 1.065401 TGGTTGTTCGTCTACGTTCGT 59.935 47.619 0.00 2.91 40.80 3.85
211 212 1.449418 GGTTGTTCGTCTACGTTCGTG 59.551 52.381 8.14 0.00 40.80 4.35
212 213 2.111756 GTTGTTCGTCTACGTTCGTGT 58.888 47.619 8.14 0.00 40.80 4.49
213 214 1.745566 TGTTCGTCTACGTTCGTGTG 58.254 50.000 8.14 1.60 40.80 3.82
214 215 1.063912 TGTTCGTCTACGTTCGTGTGT 59.936 47.619 8.14 0.00 40.80 3.72
215 216 2.111756 GTTCGTCTACGTTCGTGTGTT 58.888 47.619 8.14 0.00 40.80 3.32
216 217 2.473530 TCGTCTACGTTCGTGTGTTT 57.526 45.000 8.14 0.00 40.80 2.83
217 218 2.796304 TCGTCTACGTTCGTGTGTTTT 58.204 42.857 8.14 0.00 40.80 2.43
218 219 2.783284 TCGTCTACGTTCGTGTGTTTTC 59.217 45.455 8.14 0.00 40.80 2.29
219 220 2.531103 CGTCTACGTTCGTGTGTTTTCA 59.469 45.455 8.14 0.00 34.11 2.69
220 221 3.360384 CGTCTACGTTCGTGTGTTTTCAG 60.360 47.826 8.14 0.00 34.11 3.02
221 222 3.060740 GTCTACGTTCGTGTGTTTTCAGG 60.061 47.826 8.14 0.00 0.00 3.86
222 223 1.729284 ACGTTCGTGTGTTTTCAGGT 58.271 45.000 0.00 0.00 0.00 4.00
223 224 2.078392 ACGTTCGTGTGTTTTCAGGTT 58.922 42.857 0.00 0.00 0.00 3.50
224 225 2.159626 ACGTTCGTGTGTTTTCAGGTTG 60.160 45.455 0.00 0.00 0.00 3.77
225 226 2.789779 CGTTCGTGTGTTTTCAGGTTGG 60.790 50.000 0.00 0.00 0.00 3.77
226 227 2.404923 TCGTGTGTTTTCAGGTTGGA 57.595 45.000 0.00 0.00 0.00 3.53
227 228 2.925724 TCGTGTGTTTTCAGGTTGGAT 58.074 42.857 0.00 0.00 0.00 3.41
228 229 2.875933 TCGTGTGTTTTCAGGTTGGATC 59.124 45.455 0.00 0.00 0.00 3.36
229 230 2.031157 CGTGTGTTTTCAGGTTGGATCC 60.031 50.000 4.20 4.20 0.00 3.36
230 231 3.222603 GTGTGTTTTCAGGTTGGATCCT 58.777 45.455 14.23 0.00 38.51 3.24
231 232 3.636764 GTGTGTTTTCAGGTTGGATCCTT 59.363 43.478 14.23 0.00 35.37 3.36
232 233 3.888930 TGTGTTTTCAGGTTGGATCCTTC 59.111 43.478 14.23 5.77 35.37 3.46
233 234 3.255888 GTGTTTTCAGGTTGGATCCTTCC 59.744 47.826 14.23 14.69 42.94 3.46
234 235 2.488153 GTTTTCAGGTTGGATCCTTCCG 59.512 50.000 14.23 11.07 45.89 4.30
235 236 1.651737 TTCAGGTTGGATCCTTCCGA 58.348 50.000 14.23 12.90 45.89 4.55
236 237 1.879575 TCAGGTTGGATCCTTCCGAT 58.120 50.000 14.23 0.00 45.89 4.18
237 238 1.762957 TCAGGTTGGATCCTTCCGATC 59.237 52.381 14.23 0.00 45.89 3.69
238 239 1.765314 CAGGTTGGATCCTTCCGATCT 59.235 52.381 14.23 0.00 46.42 2.75
239 240 2.965831 CAGGTTGGATCCTTCCGATCTA 59.034 50.000 14.23 0.00 44.03 1.98
240 241 2.966516 AGGTTGGATCCTTCCGATCTAC 59.033 50.000 14.23 0.00 44.03 2.59
241 242 2.288273 GGTTGGATCCTTCCGATCTACG 60.288 54.545 14.23 0.00 45.90 3.51
254 255 3.642705 CGATCTACGGCAATCTTCATCA 58.357 45.455 0.00 0.00 38.46 3.07
255 256 3.672397 CGATCTACGGCAATCTTCATCAG 59.328 47.826 0.00 0.00 38.46 2.90
256 257 4.626042 GATCTACGGCAATCTTCATCAGT 58.374 43.478 0.00 0.00 0.00 3.41
257 258 3.785486 TCTACGGCAATCTTCATCAGTG 58.215 45.455 0.00 0.00 0.00 3.66
258 259 1.742761 ACGGCAATCTTCATCAGTGG 58.257 50.000 0.00 0.00 0.00 4.00
259 260 0.379669 CGGCAATCTTCATCAGTGGC 59.620 55.000 0.00 0.00 0.00 5.01
260 261 0.379669 GGCAATCTTCATCAGTGGCG 59.620 55.000 0.00 0.00 0.00 5.69
261 262 0.379669 GCAATCTTCATCAGTGGCGG 59.620 55.000 0.00 0.00 0.00 6.13
262 263 1.742761 CAATCTTCATCAGTGGCGGT 58.257 50.000 0.00 0.00 0.00 5.68
263 264 2.086869 CAATCTTCATCAGTGGCGGTT 58.913 47.619 0.00 0.00 0.00 4.44
264 265 1.742761 ATCTTCATCAGTGGCGGTTG 58.257 50.000 0.00 0.00 0.00 3.77
265 266 0.955428 TCTTCATCAGTGGCGGTTGC 60.955 55.000 0.00 0.00 41.71 4.17
266 267 0.957395 CTTCATCAGTGGCGGTTGCT 60.957 55.000 0.00 0.00 42.25 3.91
267 268 1.236616 TTCATCAGTGGCGGTTGCTG 61.237 55.000 0.00 0.00 42.25 4.41
268 269 1.968017 CATCAGTGGCGGTTGCTGT 60.968 57.895 0.00 0.00 42.25 4.40
269 270 1.228245 ATCAGTGGCGGTTGCTGTT 60.228 52.632 0.00 0.00 42.25 3.16
270 271 1.237285 ATCAGTGGCGGTTGCTGTTC 61.237 55.000 0.00 0.00 42.25 3.18
271 272 1.893808 CAGTGGCGGTTGCTGTTCT 60.894 57.895 0.00 0.00 42.25 3.01
272 273 1.893808 AGTGGCGGTTGCTGTTCTG 60.894 57.895 0.00 0.00 42.25 3.02
273 274 1.891919 GTGGCGGTTGCTGTTCTGA 60.892 57.895 0.00 0.00 42.25 3.27
274 275 1.073025 TGGCGGTTGCTGTTCTGAT 59.927 52.632 0.00 0.00 42.25 2.90
275 276 1.236616 TGGCGGTTGCTGTTCTGATG 61.237 55.000 0.00 0.00 42.25 3.07
276 277 1.154150 GCGGTTGCTGTTCTGATGC 60.154 57.895 0.00 0.00 38.39 3.91
277 278 1.580845 GCGGTTGCTGTTCTGATGCT 61.581 55.000 0.00 0.00 38.39 3.79
278 279 0.445436 CGGTTGCTGTTCTGATGCTC 59.555 55.000 0.00 0.00 0.00 4.26
279 280 1.818642 GGTTGCTGTTCTGATGCTCT 58.181 50.000 0.00 0.00 0.00 4.09
280 281 2.675032 CGGTTGCTGTTCTGATGCTCTA 60.675 50.000 0.00 0.00 0.00 2.43
281 282 2.935201 GGTTGCTGTTCTGATGCTCTAG 59.065 50.000 0.00 0.00 0.00 2.43
282 283 3.594134 GTTGCTGTTCTGATGCTCTAGT 58.406 45.455 0.00 0.00 0.00 2.57
283 284 3.516981 TGCTGTTCTGATGCTCTAGTC 57.483 47.619 0.00 0.00 0.00 2.59
284 285 2.167281 TGCTGTTCTGATGCTCTAGTCC 59.833 50.000 0.00 0.00 0.00 3.85
285 286 2.430332 GCTGTTCTGATGCTCTAGTCCT 59.570 50.000 0.00 0.00 0.00 3.85
286 287 3.634448 GCTGTTCTGATGCTCTAGTCCTA 59.366 47.826 0.00 0.00 0.00 2.94
287 288 4.280677 GCTGTTCTGATGCTCTAGTCCTAT 59.719 45.833 0.00 0.00 0.00 2.57
288 289 5.771469 CTGTTCTGATGCTCTAGTCCTATG 58.229 45.833 0.00 0.00 0.00 2.23
289 290 5.449553 TGTTCTGATGCTCTAGTCCTATGA 58.550 41.667 0.00 0.00 0.00 2.15
290 291 5.534278 TGTTCTGATGCTCTAGTCCTATGAG 59.466 44.000 0.00 0.00 0.00 2.90
291 292 4.661222 TCTGATGCTCTAGTCCTATGAGG 58.339 47.826 0.00 0.00 36.46 3.86
292 293 4.105537 TCTGATGCTCTAGTCCTATGAGGT 59.894 45.833 0.00 0.00 36.53 3.85
293 294 4.402829 TGATGCTCTAGTCCTATGAGGTC 58.597 47.826 0.00 0.00 36.53 3.85
294 295 4.105537 TGATGCTCTAGTCCTATGAGGTCT 59.894 45.833 0.00 0.00 37.51 3.85
295 296 4.528076 TGCTCTAGTCCTATGAGGTCTT 57.472 45.455 0.00 0.00 35.42 3.01
296 297 5.648330 TGCTCTAGTCCTATGAGGTCTTA 57.352 43.478 0.00 0.00 35.42 2.10
297 298 5.626142 TGCTCTAGTCCTATGAGGTCTTAG 58.374 45.833 0.00 0.00 35.42 2.18
298 299 4.457949 GCTCTAGTCCTATGAGGTCTTAGC 59.542 50.000 9.39 9.39 35.42 3.09
299 300 5.626142 CTCTAGTCCTATGAGGTCTTAGCA 58.374 45.833 0.00 0.00 35.42 3.49
300 301 5.378332 TCTAGTCCTATGAGGTCTTAGCAC 58.622 45.833 0.00 0.00 35.42 4.40
301 302 2.952978 AGTCCTATGAGGTCTTAGCACG 59.047 50.000 0.00 0.00 36.53 5.34
302 303 2.950309 GTCCTATGAGGTCTTAGCACGA 59.050 50.000 0.00 0.00 36.53 4.35
303 304 2.950309 TCCTATGAGGTCTTAGCACGAC 59.050 50.000 0.00 0.00 36.53 4.34
304 305 2.287069 CCTATGAGGTCTTAGCACGACG 60.287 54.545 0.00 0.00 32.24 5.12
305 306 1.460504 ATGAGGTCTTAGCACGACGA 58.539 50.000 0.00 0.00 32.24 4.20
306 307 0.520404 TGAGGTCTTAGCACGACGAC 59.480 55.000 0.00 0.00 32.24 4.34
307 308 0.803740 GAGGTCTTAGCACGACGACT 59.196 55.000 0.00 0.59 32.24 4.18
308 309 1.199558 GAGGTCTTAGCACGACGACTT 59.800 52.381 0.00 0.00 32.24 3.01
309 310 1.199558 AGGTCTTAGCACGACGACTTC 59.800 52.381 0.00 0.00 32.24 3.01
310 311 1.615502 GTCTTAGCACGACGACTTCC 58.384 55.000 0.00 0.00 0.00 3.46
311 312 0.524862 TCTTAGCACGACGACTTCCC 59.475 55.000 0.00 0.00 0.00 3.97
312 313 0.797249 CTTAGCACGACGACTTCCCG 60.797 60.000 0.00 0.00 0.00 5.14
313 314 1.236616 TTAGCACGACGACTTCCCGA 61.237 55.000 0.00 0.00 0.00 5.14
314 315 1.915614 TAGCACGACGACTTCCCGAC 61.916 60.000 0.00 0.00 0.00 4.79
315 316 2.952245 CACGACGACTTCCCGACT 59.048 61.111 0.00 0.00 0.00 4.18
316 317 1.442184 CACGACGACTTCCCGACTG 60.442 63.158 0.00 0.00 0.00 3.51
317 318 1.895707 ACGACGACTTCCCGACTGT 60.896 57.895 0.00 0.00 0.00 3.55
318 319 1.154263 CGACGACTTCCCGACTGTC 60.154 63.158 0.00 0.00 0.00 3.51
319 320 1.575576 CGACGACTTCCCGACTGTCT 61.576 60.000 6.21 0.00 0.00 3.41
320 321 1.446907 GACGACTTCCCGACTGTCTA 58.553 55.000 6.21 0.00 0.00 2.59
321 322 1.130186 GACGACTTCCCGACTGTCTAC 59.870 57.143 6.21 0.00 0.00 2.59
322 323 1.271271 ACGACTTCCCGACTGTCTACT 60.271 52.381 6.21 0.00 0.00 2.57
323 324 2.027745 ACGACTTCCCGACTGTCTACTA 60.028 50.000 6.21 0.00 0.00 1.82
324 325 2.351111 CGACTTCCCGACTGTCTACTAC 59.649 54.545 6.21 0.00 0.00 2.73
325 326 3.341823 GACTTCCCGACTGTCTACTACA 58.658 50.000 6.21 0.00 36.42 2.74
326 327 3.755378 GACTTCCCGACTGTCTACTACAA 59.245 47.826 6.21 0.00 37.74 2.41
327 328 3.505293 ACTTCCCGACTGTCTACTACAAC 59.495 47.826 6.21 0.00 37.74 3.32
328 329 3.144657 TCCCGACTGTCTACTACAACA 57.855 47.619 6.21 0.00 37.74 3.33
329 330 3.489355 TCCCGACTGTCTACTACAACAA 58.511 45.455 6.21 0.00 37.74 2.83
330 331 3.504906 TCCCGACTGTCTACTACAACAAG 59.495 47.826 6.21 0.00 37.74 3.16
331 332 3.255149 CCCGACTGTCTACTACAACAAGT 59.745 47.826 6.21 0.00 37.74 3.16
332 333 4.261909 CCCGACTGTCTACTACAACAAGTT 60.262 45.833 6.21 0.00 37.74 2.66
333 334 5.287226 CCGACTGTCTACTACAACAAGTTT 58.713 41.667 6.21 0.00 37.74 2.66
334 335 5.751990 CCGACTGTCTACTACAACAAGTTTT 59.248 40.000 6.21 0.00 37.74 2.43
335 336 6.292168 CCGACTGTCTACTACAACAAGTTTTG 60.292 42.308 6.21 0.00 37.74 2.44
336 337 6.359480 ACTGTCTACTACAACAAGTTTTGC 57.641 37.500 0.00 0.00 37.74 3.68
337 338 5.296035 ACTGTCTACTACAACAAGTTTTGCC 59.704 40.000 0.00 0.00 37.74 4.52
338 339 4.577283 TGTCTACTACAACAAGTTTTGCCC 59.423 41.667 0.00 0.00 34.29 5.36
339 340 3.810941 TCTACTACAACAAGTTTTGCCCG 59.189 43.478 0.00 0.00 0.00 6.13
340 341 1.679153 ACTACAACAAGTTTTGCCCGG 59.321 47.619 0.00 0.00 0.00 5.73
341 342 0.386113 TACAACAAGTTTTGCCCGGC 59.614 50.000 1.04 1.04 0.00 6.13
342 343 1.142748 CAACAAGTTTTGCCCGGCA 59.857 52.632 8.43 8.43 36.47 5.69
343 344 1.142965 AACAAGTTTTGCCCGGCAC 59.857 52.632 13.00 0.10 38.71 5.01
344 345 2.028925 CAAGTTTTGCCCGGCACC 59.971 61.111 13.00 3.01 38.71 5.01
345 346 3.601685 AAGTTTTGCCCGGCACCG 61.602 61.111 13.00 1.02 38.71 4.94
364 365 3.917760 CGAGGGAGGGGCGATGAC 61.918 72.222 0.00 0.00 0.00 3.06
365 366 3.917760 GAGGGAGGGGCGATGACG 61.918 72.222 0.00 0.00 42.93 4.35
388 389 3.491652 GCACCTTCGGCTCGCTTC 61.492 66.667 0.00 0.00 0.00 3.86
389 390 2.048222 CACCTTCGGCTCGCTTCA 60.048 61.111 0.00 0.00 0.00 3.02
390 391 2.097038 CACCTTCGGCTCGCTTCAG 61.097 63.158 0.00 0.00 0.00 3.02
391 392 2.262915 CCTTCGGCTCGCTTCAGT 59.737 61.111 0.00 0.00 0.00 3.41
392 393 2.097038 CCTTCGGCTCGCTTCAGTG 61.097 63.158 0.00 0.00 0.00 3.66
393 394 2.734673 CTTCGGCTCGCTTCAGTGC 61.735 63.158 0.00 0.00 0.00 4.40
394 395 3.226429 TTCGGCTCGCTTCAGTGCT 62.226 57.895 0.00 0.00 0.00 4.40
395 396 2.715532 TTCGGCTCGCTTCAGTGCTT 62.716 55.000 0.00 0.00 0.00 3.91
396 397 2.866028 GGCTCGCTTCAGTGCTTG 59.134 61.111 0.00 0.00 0.00 4.01
397 398 1.963338 GGCTCGCTTCAGTGCTTGT 60.963 57.895 0.00 0.00 0.00 3.16
398 399 0.670546 GGCTCGCTTCAGTGCTTGTA 60.671 55.000 0.00 0.00 0.00 2.41
399 400 0.718343 GCTCGCTTCAGTGCTTGTAG 59.282 55.000 0.00 0.00 0.00 2.74
400 401 1.937108 GCTCGCTTCAGTGCTTGTAGT 60.937 52.381 0.00 0.00 0.00 2.73
401 402 1.989165 CTCGCTTCAGTGCTTGTAGTC 59.011 52.381 0.00 0.00 0.00 2.59
402 403 0.710567 CGCTTCAGTGCTTGTAGTCG 59.289 55.000 0.00 0.00 0.00 4.18
403 404 1.784525 GCTTCAGTGCTTGTAGTCGT 58.215 50.000 0.00 0.00 0.00 4.34
404 405 1.721926 GCTTCAGTGCTTGTAGTCGTC 59.278 52.381 0.00 0.00 0.00 4.20
405 406 1.979469 CTTCAGTGCTTGTAGTCGTCG 59.021 52.381 0.00 0.00 0.00 5.12
406 407 0.386858 TCAGTGCTTGTAGTCGTCGC 60.387 55.000 0.00 0.00 0.00 5.19
407 408 0.387367 CAGTGCTTGTAGTCGTCGCT 60.387 55.000 0.00 0.00 0.00 4.93
408 409 1.135774 CAGTGCTTGTAGTCGTCGCTA 60.136 52.381 0.00 0.00 0.00 4.26
409 410 1.130749 AGTGCTTGTAGTCGTCGCTAG 59.869 52.381 0.00 0.00 0.00 3.42
410 411 0.450583 TGCTTGTAGTCGTCGCTAGG 59.549 55.000 0.00 0.00 0.00 3.02
411 412 0.450983 GCTTGTAGTCGTCGCTAGGT 59.549 55.000 0.00 0.00 0.00 3.08
412 413 1.794437 GCTTGTAGTCGTCGCTAGGTG 60.794 57.143 0.00 0.00 0.00 4.00
413 414 0.806868 TTGTAGTCGTCGCTAGGTGG 59.193 55.000 0.00 0.00 0.00 4.61
414 415 0.321919 TGTAGTCGTCGCTAGGTGGT 60.322 55.000 0.00 0.00 0.00 4.16
415 416 0.376502 GTAGTCGTCGCTAGGTGGTC 59.623 60.000 0.00 0.00 0.00 4.02
416 417 0.251354 TAGTCGTCGCTAGGTGGTCT 59.749 55.000 0.00 0.00 0.00 3.85
417 418 0.251354 AGTCGTCGCTAGGTGGTCTA 59.749 55.000 0.00 0.00 0.00 2.59
418 419 0.376502 GTCGTCGCTAGGTGGTCTAC 59.623 60.000 0.00 0.00 0.00 2.59
419 420 1.086067 TCGTCGCTAGGTGGTCTACG 61.086 60.000 0.00 0.00 0.00 3.51
420 421 1.086067 CGTCGCTAGGTGGTCTACGA 61.086 60.000 0.00 0.00 32.96 3.43
421 422 1.089920 GTCGCTAGGTGGTCTACGAA 58.910 55.000 0.00 0.00 35.22 3.85
422 423 1.674962 GTCGCTAGGTGGTCTACGAAT 59.325 52.381 0.00 0.00 35.22 3.34
423 424 1.945394 TCGCTAGGTGGTCTACGAATC 59.055 52.381 0.00 0.00 32.69 2.52
424 425 1.948145 CGCTAGGTGGTCTACGAATCT 59.052 52.381 0.00 0.00 0.00 2.40
425 426 2.287069 CGCTAGGTGGTCTACGAATCTG 60.287 54.545 0.00 0.00 0.00 2.90
426 427 2.950309 GCTAGGTGGTCTACGAATCTGA 59.050 50.000 0.00 0.00 0.00 3.27
427 428 3.380637 GCTAGGTGGTCTACGAATCTGAA 59.619 47.826 0.00 0.00 0.00 3.02
428 429 4.038162 GCTAGGTGGTCTACGAATCTGAAT 59.962 45.833 0.00 0.00 0.00 2.57
429 430 4.392921 AGGTGGTCTACGAATCTGAATG 57.607 45.455 0.00 0.00 0.00 2.67
430 431 2.866762 GGTGGTCTACGAATCTGAATGC 59.133 50.000 0.00 0.00 0.00 3.56
431 432 3.521560 GTGGTCTACGAATCTGAATGCA 58.478 45.455 0.00 0.00 0.00 3.96
432 433 3.932710 GTGGTCTACGAATCTGAATGCAA 59.067 43.478 0.00 0.00 0.00 4.08
433 434 4.572389 GTGGTCTACGAATCTGAATGCAAT 59.428 41.667 0.00 0.00 0.00 3.56
434 435 5.065218 GTGGTCTACGAATCTGAATGCAATT 59.935 40.000 0.00 0.00 40.93 2.32
435 436 5.647658 TGGTCTACGAATCTGAATGCAATTT 59.352 36.000 0.00 0.00 36.07 1.82
436 437 6.150976 TGGTCTACGAATCTGAATGCAATTTT 59.849 34.615 0.00 0.00 36.07 1.82
437 438 7.029563 GGTCTACGAATCTGAATGCAATTTTT 58.970 34.615 0.00 0.00 36.07 1.94
466 467 6.993786 TTTCTGATGTTTGTTGTACTGTCA 57.006 33.333 0.00 0.00 0.00 3.58
467 468 7.566760 TTTCTGATGTTTGTTGTACTGTCAT 57.433 32.000 0.00 0.00 0.00 3.06
468 469 8.669946 TTTCTGATGTTTGTTGTACTGTCATA 57.330 30.769 0.00 0.00 0.00 2.15
469 470 8.669946 TTCTGATGTTTGTTGTACTGTCATAA 57.330 30.769 0.00 0.00 0.00 1.90
470 471 8.846943 TCTGATGTTTGTTGTACTGTCATAAT 57.153 30.769 0.00 0.00 0.00 1.28
471 472 9.283768 TCTGATGTTTGTTGTACTGTCATAATT 57.716 29.630 0.00 0.00 0.00 1.40
532 533 1.242076 CCAAGACAGAGCTTTGGGTG 58.758 55.000 9.34 3.49 0.00 4.61
551 552 2.355115 GGATGCCAACCCGACCTT 59.645 61.111 0.00 0.00 0.00 3.50
578 579 3.210528 GGGTCGATCGAGGCGTCT 61.211 66.667 20.09 0.00 0.00 4.18
579 580 1.890979 GGGTCGATCGAGGCGTCTA 60.891 63.158 20.09 0.00 0.00 2.59
617 618 2.764314 CGAAATGGCTGGCTTCCCG 61.764 63.158 2.00 0.26 0.00 5.14
635 636 1.595929 GTCGCCCGTGGTTTGAAGA 60.596 57.895 0.00 0.00 0.00 2.87
647 648 3.053991 TGGTTTGAAGAGGTTTCTGTGGA 60.054 43.478 0.00 0.00 32.79 4.02
651 652 3.808728 TGAAGAGGTTTCTGTGGACTTG 58.191 45.455 0.00 0.00 32.79 3.16
652 653 2.262423 AGAGGTTTCTGTGGACTTGC 57.738 50.000 0.00 0.00 30.72 4.01
669 673 3.993081 ACTTGCGATTTCTCTCTCTTGTG 59.007 43.478 0.00 0.00 0.00 3.33
687 691 4.002906 TGTGTTTGGTCTAATCGAAGCT 57.997 40.909 0.00 0.00 0.00 3.74
692 696 0.178068 GGTCTAATCGAAGCTGCCCA 59.822 55.000 0.00 0.00 0.00 5.36
715 719 4.265893 TGTTTTTGACAACTAGCTCACCA 58.734 39.130 0.00 0.00 34.69 4.17
761 769 2.159170 CGTGGCCTCTGTTTTGGAAAAA 60.159 45.455 3.32 0.00 0.00 1.94
806 814 2.187958 TCTGAATGGGAATCTGACCGT 58.812 47.619 0.00 0.00 0.00 4.83
818 826 2.108362 GACCGTATCCAAGGGCCG 59.892 66.667 0.00 0.00 36.53 6.13
1084 1151 3.115390 TCCTCGAATCCTTCCTTGGAAT 58.885 45.455 2.24 0.00 39.85 3.01
1403 1865 0.698198 TCCAGGTACCCCAACCAACA 60.698 55.000 8.74 0.00 42.40 3.33
1405 1867 0.538746 CAGGTACCCCAACCAACACC 60.539 60.000 8.74 0.00 42.40 4.16
1406 1868 0.699922 AGGTACCCCAACCAACACCT 60.700 55.000 8.74 0.00 42.40 4.00
1537 2010 2.289565 GACTTGGATCGTGGGGATTTC 58.710 52.381 0.00 0.00 34.82 2.17
1538 2011 1.299541 CTTGGATCGTGGGGATTTCG 58.700 55.000 0.00 0.00 34.82 3.46
1540 2013 1.227853 GGATCGTGGGGATTTCGGG 60.228 63.158 0.00 0.00 34.82 5.14
1577 2070 5.069251 GGGGAATGAATCTCTCGAGTTTAGA 59.931 44.000 13.13 8.59 0.00 2.10
1585 2078 8.957466 TGAATCTCTCGAGTTTAGAATGTCTAA 58.043 33.333 13.13 0.00 37.20 2.10
1586 2079 9.445786 GAATCTCTCGAGTTTAGAATGTCTAAG 57.554 37.037 13.13 0.00 39.80 2.18
1624 2125 4.406003 GGATAGTAGTGGTGAATCAGTGGT 59.594 45.833 0.00 0.00 0.00 4.16
1629 2130 2.076863 GTGGTGAATCAGTGGTAGCAC 58.923 52.381 17.29 17.29 33.45 4.40
1706 2214 1.338020 GCAACTGCAAACTAGGCTTGT 59.662 47.619 0.00 0.00 41.59 3.16
1710 2218 1.808945 CTGCAAACTAGGCTTGTCTGG 59.191 52.381 1.23 0.00 0.00 3.86
1765 2274 7.517614 TTCTGTTGTTTGTTCATTATAGGCA 57.482 32.000 0.00 0.00 0.00 4.75
1803 2312 0.981183 TTTCTGTACGACAGGGGCAT 59.019 50.000 12.89 0.00 45.94 4.40
1817 2326 2.981784 AGGGGCATGCAATCACTCTATA 59.018 45.455 21.36 0.00 0.00 1.31
1821 2330 4.214971 GGGCATGCAATCACTCTATAACTG 59.785 45.833 21.36 0.00 0.00 3.16
1822 2331 4.818546 GGCATGCAATCACTCTATAACTGT 59.181 41.667 21.36 0.00 0.00 3.55
1823 2332 5.297776 GGCATGCAATCACTCTATAACTGTT 59.702 40.000 21.36 0.00 0.00 3.16
1824 2333 6.183360 GGCATGCAATCACTCTATAACTGTTT 60.183 38.462 21.36 0.00 0.00 2.83
1825 2334 6.690098 GCATGCAATCACTCTATAACTGTTTG 59.310 38.462 14.21 0.00 0.00 2.93
1826 2335 7.627088 GCATGCAATCACTCTATAACTGTTTGT 60.627 37.037 14.21 0.00 0.00 2.83
1827 2336 7.364522 TGCAATCACTCTATAACTGTTTGTC 57.635 36.000 0.00 0.00 0.00 3.18
1828 2337 7.161404 TGCAATCACTCTATAACTGTTTGTCT 58.839 34.615 0.00 0.00 0.00 3.41
1829 2338 7.118245 TGCAATCACTCTATAACTGTTTGTCTG 59.882 37.037 0.00 0.00 0.00 3.51
1830 2339 7.118390 GCAATCACTCTATAACTGTTTGTCTGT 59.882 37.037 0.00 0.00 0.00 3.41
1876 2389 6.231211 ACCTGGTACTCTGAATTTAGTTGTG 58.769 40.000 0.00 0.00 0.00 3.33
1920 2433 4.344679 AGTGAAATGGCCTGAAAATGTCAA 59.655 37.500 3.32 0.00 35.22 3.18
1925 2438 2.622942 TGGCCTGAAAATGTCAACACTC 59.377 45.455 3.32 0.00 35.22 3.51
1931 2444 5.221303 CCTGAAAATGTCAACACTCCACATT 60.221 40.000 0.00 0.00 41.50 2.71
1950 2463 4.708421 ACATTGGCTTATTGAACATGCTCT 59.292 37.500 0.00 0.00 0.00 4.09
1953 2466 3.871006 TGGCTTATTGAACATGCTCTACG 59.129 43.478 0.00 0.00 0.00 3.51
2048 2563 2.268298 AGTGAACATCCGCACGATAAC 58.732 47.619 0.00 0.00 39.88 1.89
2049 2564 2.094182 AGTGAACATCCGCACGATAACT 60.094 45.455 0.00 0.00 39.88 2.24
2050 2565 2.281762 GTGAACATCCGCACGATAACTC 59.718 50.000 0.00 0.00 0.00 3.01
2089 2604 6.618287 CTGAGGTTTGTTCAGTGTTCATTA 57.382 37.500 0.00 0.00 37.79 1.90
2147 2662 3.177228 AGGTGAGTAGCAAATCCAGTCT 58.823 45.455 0.00 0.00 0.00 3.24
2229 2744 6.805271 GCCCGAAGAACTAAATTTACCTTTTC 59.195 38.462 0.00 0.00 0.00 2.29
2285 2800 7.276658 AGCAGTCTAGATCGTTTAACATTTCAG 59.723 37.037 0.00 0.00 0.00 3.02
2303 2818 9.515226 ACATTTCAGGCTGTTCTAAAACTAATA 57.485 29.630 15.27 0.00 36.30 0.98
2383 2898 2.899303 ATCGAGACCCCAAACCAATT 57.101 45.000 0.00 0.00 0.00 2.32
2389 2904 4.038162 CGAGACCCCAAACCAATTTAAACA 59.962 41.667 0.00 0.00 0.00 2.83
2418 2933 2.960688 GCCTTGCCCGGAGAACTCT 61.961 63.158 0.73 0.00 0.00 3.24
2424 2939 4.372656 CTTGCCCGGAGAACTCTATTTAG 58.627 47.826 0.73 0.00 0.00 1.85
2426 2941 2.365941 GCCCGGAGAACTCTATTTAGCT 59.634 50.000 0.73 0.00 0.00 3.32
2694 3215 7.069331 TCCTGTTGTGACATGGTTTAATCTTTT 59.931 33.333 0.00 0.00 34.72 2.27
2818 3339 2.066262 TCGATCAGAAAAGCCGTCAAC 58.934 47.619 0.00 0.00 0.00 3.18
2850 3371 8.565896 ACTCTGAATTTTATTGTGCAGTGATA 57.434 30.769 0.00 0.00 0.00 2.15
2851 3372 9.182214 ACTCTGAATTTTATTGTGCAGTGATAT 57.818 29.630 0.00 0.00 0.00 1.63
2947 3468 5.653255 AGGCATATTAAGGTTCCAGTCAT 57.347 39.130 0.00 0.00 0.00 3.06
2964 3485 6.818142 TCCAGTCATGTAGTTGTCATTATGTG 59.182 38.462 0.00 0.00 0.00 3.21
2986 3507 6.320926 TGTGATGTTTACCAATGACCCATATG 59.679 38.462 0.00 0.00 0.00 1.78
3124 3646 2.152016 GTAGCAAACCCAGTTCCAGTC 58.848 52.381 0.00 0.00 0.00 3.51
3144 3666 5.014858 AGTCATTCTAGTAAACCGAGACCA 58.985 41.667 0.00 0.00 0.00 4.02
3287 3809 2.415983 ATATGATGGGACGGAGGGAA 57.584 50.000 0.00 0.00 0.00 3.97
3350 3872 6.434028 TGAGCAGTTTAGATGGTTTAGCATTT 59.566 34.615 0.00 0.00 0.00 2.32
3417 3948 7.096551 AGAGTCTCTTTATGCTTCAGTTCTTC 58.903 38.462 0.00 0.00 0.00 2.87
3434 3965 9.862371 TCAGTTCTTCTCTTCATATTAGTTGTC 57.138 33.333 0.00 0.00 0.00 3.18
3515 4517 4.139786 TGTCCTTACGTAACAGACTGTCT 58.860 43.478 23.89 4.06 0.00 3.41
3632 4634 0.980231 AGCGCTTGGGAGAGATTCCT 60.980 55.000 2.64 0.00 45.98 3.36
3639 4641 4.684757 GCTTGGGAGAGATTCCTTTCCTAC 60.685 50.000 0.00 0.00 45.98 3.18
3708 4710 7.201401 GCATTTTTCGTTTATTGTACATGGGTC 60.201 37.037 0.00 0.00 0.00 4.46
3738 4740 4.205587 GGCTTAGGTAGTACAGTAGCAGA 58.794 47.826 16.58 0.00 0.00 4.26
3745 4747 5.299782 AGGTAGTACAGTAGCAGATAGTTGC 59.700 44.000 2.06 0.00 44.41 4.17
3925 4927 3.382227 TCCACGGCGAAATGATACTTCTA 59.618 43.478 16.62 0.00 0.00 2.10
4038 5040 2.490509 ACATCATGACACTTGGTGCATG 59.509 45.455 19.04 19.04 42.92 4.06
4039 5041 2.275134 TCATGACACTTGGTGCATGT 57.725 45.000 21.60 0.00 42.56 3.21
4046 5048 0.322816 ACTTGGTGCATGTAGGGCTG 60.323 55.000 0.00 0.00 0.00 4.85
4088 5090 1.358759 CAAAAGAACAGGCGGCGTT 59.641 52.632 16.38 16.38 0.00 4.84
4139 5141 2.433970 CCACCAACCATTTTTCACCACT 59.566 45.455 0.00 0.00 0.00 4.00
4142 5144 3.384467 ACCAACCATTTTTCACCACTGAG 59.616 43.478 0.00 0.00 0.00 3.35
4199 5201 6.596309 AATCTTGAAATCCTTTTCCCTGTC 57.404 37.500 0.00 0.00 40.49 3.51
4358 5366 2.235898 CCTCAAGAAAGCCAGCTCTACT 59.764 50.000 0.00 0.00 0.00 2.57
4376 5384 3.618690 ACTTACAATGCCCTGTCTCTC 57.381 47.619 0.00 0.00 0.00 3.20
4403 5411 2.507471 GTTCTTCCATGGAGAGGATGGT 59.493 50.000 15.53 0.00 41.19 3.55
4409 5417 1.489649 CATGGAGAGGATGGTGAAGCT 59.510 52.381 0.00 0.00 0.00 3.74
4415 5423 1.734465 GAGGATGGTGAAGCTTGTTCG 59.266 52.381 2.10 0.00 0.00 3.95
4427 5435 1.003112 TTGTTCGGGCGCCATAACT 60.003 52.632 31.12 0.00 0.00 2.24
4440 5448 2.468831 CCATAACTTCTGAGAGCTCGC 58.531 52.381 10.93 10.93 0.00 5.03
4442 5450 2.929531 TAACTTCTGAGAGCTCGCTG 57.070 50.000 18.64 17.51 0.00 5.18
4446 5454 0.961753 TTCTGAGAGCTCGCTGTCAA 59.038 50.000 18.64 6.69 44.05 3.18
4452 5460 1.277557 AGAGCTCGCTGTCAAATTCCT 59.722 47.619 8.37 0.00 0.00 3.36
4469 5477 2.348472 TCCTTGACAGATTCCCAGGTT 58.652 47.619 0.00 0.00 0.00 3.50
4478 5486 2.309755 AGATTCCCAGGTTGAAGATGCA 59.690 45.455 0.00 0.00 0.00 3.96
4481 5489 1.918262 TCCCAGGTTGAAGATGCAGAT 59.082 47.619 0.00 0.00 0.00 2.90
4485 5493 3.881688 CCAGGTTGAAGATGCAGATAAGG 59.118 47.826 0.00 0.00 0.00 2.69
4490 5498 4.944619 TGAAGATGCAGATAAGGACGAT 57.055 40.909 0.00 0.00 0.00 3.73
4493 5501 6.450545 TGAAGATGCAGATAAGGACGATAAG 58.549 40.000 0.00 0.00 0.00 1.73
4599 5607 3.638160 TGCATGCTATTTTGAATCTCCCC 59.362 43.478 20.33 0.00 0.00 4.81
4675 5683 4.498009 CCAGTCTTTGAAATGTGTGACCAC 60.498 45.833 0.00 0.00 42.19 4.16
4719 5728 1.271379 TGGAGTTTTGGAGCTGTAGGC 60.271 52.381 0.00 0.00 42.19 3.93
4727 5736 1.002430 TGGAGCTGTAGGCAGAAAGTG 59.998 52.381 0.00 0.00 45.28 3.16
4728 5737 1.002544 GGAGCTGTAGGCAGAAAGTGT 59.997 52.381 0.00 0.00 45.28 3.55
4755 5764 7.272084 GTGTGTGACATTTAGCTGATTTGATTC 59.728 37.037 0.00 0.00 0.00 2.52
5189 6237 6.260936 TCACAAGAAAACATCTCAGACTTTCC 59.739 38.462 3.23 0.00 37.42 3.13
5190 6238 6.261826 CACAAGAAAACATCTCAGACTTTCCT 59.738 38.462 3.23 0.00 37.42 3.36
5191 6239 6.484977 ACAAGAAAACATCTCAGACTTTCCTC 59.515 38.462 3.23 0.00 37.42 3.71
5210 6258 3.220999 CTCCTGTCGGCACCAACGA 62.221 63.158 0.00 0.00 38.13 3.85
5257 6305 1.588239 AGGCCATGGAGATGTGAAGA 58.412 50.000 18.40 0.00 0.00 2.87
5272 6320 0.976590 GAAGAACCTCGGGCCCTAGT 60.977 60.000 22.43 11.57 0.00 2.57
5363 6417 5.046591 TCCGTCAGTAGGAAAAATGTCTCAT 60.047 40.000 0.00 0.00 34.33 2.90
5388 6443 5.215845 TGTTCTATCCATGTCCTGATGGTA 58.784 41.667 0.00 0.00 43.20 3.25
5494 6549 5.244402 TCTGTTTAGATCCGGTCTTTGTACA 59.756 40.000 11.09 0.00 38.42 2.90
5574 6629 2.434884 TTGCTGCTCTAGTGCGCC 60.435 61.111 21.81 12.68 33.82 6.53
5580 6635 2.409651 CTCTAGTGCGCCGGTCTC 59.590 66.667 4.18 0.00 0.00 3.36
5607 6662 4.407945 GGGCCTTAGTATGACAACTTCCTA 59.592 45.833 0.84 0.00 0.00 2.94
5625 6680 9.452287 AACTTCCTAACTGTTTACTACAACAAA 57.548 29.630 0.00 0.00 36.22 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 8.088365 GCAGGACACAAACCTCTTTAAAAATAT 58.912 33.333 0.00 0.00 35.35 1.28
17 18 7.286775 AGCAGGACACAAACCTCTTTAAAAATA 59.713 33.333 0.00 0.00 35.35 1.40
18 19 6.098266 AGCAGGACACAAACCTCTTTAAAAAT 59.902 34.615 0.00 0.00 35.35 1.82
19 20 5.420739 AGCAGGACACAAACCTCTTTAAAAA 59.579 36.000 0.00 0.00 35.35 1.94
20 21 4.953579 AGCAGGACACAAACCTCTTTAAAA 59.046 37.500 0.00 0.00 35.35 1.52
21 22 4.532834 AGCAGGACACAAACCTCTTTAAA 58.467 39.130 0.00 0.00 35.35 1.52
22 23 4.164843 AGCAGGACACAAACCTCTTTAA 57.835 40.909 0.00 0.00 35.35 1.52
23 24 3.857157 AGCAGGACACAAACCTCTTTA 57.143 42.857 0.00 0.00 35.35 1.85
24 25 2.736670 AGCAGGACACAAACCTCTTT 57.263 45.000 0.00 0.00 35.35 2.52
25 26 2.736670 AAGCAGGACACAAACCTCTT 57.263 45.000 0.00 0.00 35.35 2.85
26 27 2.039084 CCTAAGCAGGACACAAACCTCT 59.961 50.000 0.00 0.00 45.91 3.69
27 28 2.038557 TCCTAAGCAGGACACAAACCTC 59.961 50.000 0.00 0.00 46.58 3.85
28 29 2.054799 TCCTAAGCAGGACACAAACCT 58.945 47.619 0.00 0.00 46.58 3.50
29 30 2.561478 TCCTAAGCAGGACACAAACC 57.439 50.000 0.00 0.00 46.58 3.27
38 39 0.179097 GTCTCGCCTTCCTAAGCAGG 60.179 60.000 0.00 0.00 44.17 4.85
39 40 0.526524 CGTCTCGCCTTCCTAAGCAG 60.527 60.000 0.00 0.00 0.00 4.24
40 41 1.511305 CGTCTCGCCTTCCTAAGCA 59.489 57.895 0.00 0.00 0.00 3.91
41 42 1.227002 CCGTCTCGCCTTCCTAAGC 60.227 63.158 0.00 0.00 0.00 3.09
42 43 0.179134 CACCGTCTCGCCTTCCTAAG 60.179 60.000 0.00 0.00 0.00 2.18
43 44 1.601419 CCACCGTCTCGCCTTCCTAA 61.601 60.000 0.00 0.00 0.00 2.69
44 45 2.050350 CCACCGTCTCGCCTTCCTA 61.050 63.158 0.00 0.00 0.00 2.94
45 46 3.382832 CCACCGTCTCGCCTTCCT 61.383 66.667 0.00 0.00 0.00 3.36
58 59 4.785453 CTTCAGGGAGCCGCCACC 62.785 72.222 0.00 0.00 38.95 4.61
59 60 3.036429 ATCTTCAGGGAGCCGCCAC 62.036 63.158 0.00 0.00 38.95 5.01
60 61 2.688666 ATCTTCAGGGAGCCGCCA 60.689 61.111 0.00 0.00 38.95 5.69
61 62 2.203126 CATCTTCAGGGAGCCGCC 60.203 66.667 0.00 0.00 0.00 6.13
62 63 2.203126 CCATCTTCAGGGAGCCGC 60.203 66.667 0.00 0.00 0.00 6.53
63 64 0.471617 ATTCCATCTTCAGGGAGCCG 59.528 55.000 0.00 0.00 34.02 5.52
64 65 3.497584 CCTTATTCCATCTTCAGGGAGCC 60.498 52.174 0.00 0.00 34.02 4.70
65 66 3.137360 ACCTTATTCCATCTTCAGGGAGC 59.863 47.826 0.00 0.00 34.02 4.70
66 67 4.202409 GGACCTTATTCCATCTTCAGGGAG 60.202 50.000 0.00 0.00 35.49 4.30
67 68 3.716872 GGACCTTATTCCATCTTCAGGGA 59.283 47.826 0.00 0.00 35.49 4.20
68 69 3.718956 AGGACCTTATTCCATCTTCAGGG 59.281 47.826 0.00 0.00 38.25 4.45
69 70 5.372373 GAAGGACCTTATTCCATCTTCAGG 58.628 45.833 6.75 0.00 38.25 3.86
70 71 5.372373 GGAAGGACCTTATTCCATCTTCAG 58.628 45.833 6.75 0.00 43.75 3.02
71 72 4.166144 GGGAAGGACCTTATTCCATCTTCA 59.834 45.833 6.75 0.00 45.70 3.02
72 73 4.720046 GGGAAGGACCTTATTCCATCTTC 58.280 47.826 6.75 0.00 45.70 2.87
73 74 3.136626 CGGGAAGGACCTTATTCCATCTT 59.863 47.826 6.75 0.00 45.70 2.40
74 75 2.706190 CGGGAAGGACCTTATTCCATCT 59.294 50.000 6.75 0.00 45.70 2.90
75 76 2.810767 GCGGGAAGGACCTTATTCCATC 60.811 54.545 6.75 0.00 45.70 3.51
76 77 1.143073 GCGGGAAGGACCTTATTCCAT 59.857 52.381 6.75 0.00 45.70 3.41
77 78 0.544697 GCGGGAAGGACCTTATTCCA 59.455 55.000 6.75 0.00 45.70 3.53
78 79 0.179026 GGCGGGAAGGACCTTATTCC 60.179 60.000 6.75 4.27 43.60 3.01
79 80 0.837940 AGGCGGGAAGGACCTTATTC 59.162 55.000 6.75 0.00 38.98 1.75
80 81 2.047830 CTAGGCGGGAAGGACCTTATT 58.952 52.381 6.75 0.00 38.98 1.40
81 82 1.718280 CTAGGCGGGAAGGACCTTAT 58.282 55.000 6.75 0.00 38.98 1.73
82 83 1.047034 GCTAGGCGGGAAGGACCTTA 61.047 60.000 6.75 0.00 38.98 2.69
83 84 2.368011 GCTAGGCGGGAAGGACCTT 61.368 63.158 6.40 6.40 38.98 3.50
84 85 2.764547 GCTAGGCGGGAAGGACCT 60.765 66.667 0.00 0.00 38.98 3.85
85 86 3.862991 GGCTAGGCGGGAAGGACC 61.863 72.222 0.00 0.00 38.08 4.46
86 87 3.862991 GGGCTAGGCGGGAAGGAC 61.863 72.222 10.58 0.00 0.00 3.85
96 97 4.798682 ACCAGGACGGGGGCTAGG 62.799 72.222 0.00 0.00 40.22 3.02
97 98 3.470888 CACCAGGACGGGGGCTAG 61.471 72.222 0.00 0.00 40.22 3.42
106 107 3.701604 CTAGACGCGCCACCAGGAC 62.702 68.421 5.73 0.00 36.89 3.85
107 108 3.449227 CTAGACGCGCCACCAGGA 61.449 66.667 5.73 0.00 36.89 3.86
109 110 3.723235 ATGCTAGACGCGCCACCAG 62.723 63.158 5.73 0.00 43.27 4.00
110 111 3.716539 GATGCTAGACGCGCCACCA 62.717 63.158 5.73 0.00 43.27 4.17
111 112 2.962253 GATGCTAGACGCGCCACC 60.962 66.667 5.73 0.00 43.27 4.61
112 113 3.323136 CGATGCTAGACGCGCCAC 61.323 66.667 5.73 0.00 43.27 5.01
113 114 3.751401 GACGATGCTAGACGCGCCA 62.751 63.158 5.73 0.00 43.27 5.69
114 115 3.025176 GACGATGCTAGACGCGCC 61.025 66.667 5.73 0.00 43.27 6.53
115 116 3.379625 CGACGATGCTAGACGCGC 61.380 66.667 5.73 0.00 43.27 6.86
116 117 2.722548 CCGACGATGCTAGACGCG 60.723 66.667 3.53 3.53 43.27 6.01
117 118 1.939785 CACCGACGATGCTAGACGC 60.940 63.158 0.00 0.00 39.77 5.19
118 119 1.298413 CCACCGACGATGCTAGACG 60.298 63.158 0.00 0.00 0.00 4.18
119 120 1.065928 CCCACCGACGATGCTAGAC 59.934 63.158 0.00 0.00 0.00 2.59
120 121 2.782222 GCCCACCGACGATGCTAGA 61.782 63.158 0.00 0.00 0.00 2.43
121 122 2.279517 GCCCACCGACGATGCTAG 60.280 66.667 0.00 0.00 0.00 3.42
122 123 2.431454 ATGCCCACCGACGATGCTA 61.431 57.895 0.00 0.00 0.00 3.49
123 124 3.785859 ATGCCCACCGACGATGCT 61.786 61.111 0.00 0.00 0.00 3.79
124 125 3.576356 CATGCCCACCGACGATGC 61.576 66.667 0.00 0.00 0.00 3.91
125 126 2.125147 ACATGCCCACCGACGATG 60.125 61.111 0.00 0.00 0.00 3.84
126 127 2.125147 CACATGCCCACCGACGAT 60.125 61.111 0.00 0.00 0.00 3.73
127 128 4.386951 CCACATGCCCACCGACGA 62.387 66.667 0.00 0.00 0.00 4.20
128 129 4.386951 TCCACATGCCCACCGACG 62.387 66.667 0.00 0.00 0.00 5.12
129 130 2.436646 CTCCACATGCCCACCGAC 60.437 66.667 0.00 0.00 0.00 4.79
130 131 3.716195 CCTCCACATGCCCACCGA 61.716 66.667 0.00 0.00 0.00 4.69
131 132 4.033776 ACCTCCACATGCCCACCG 62.034 66.667 0.00 0.00 0.00 4.94
132 133 2.361610 CACCTCCACATGCCCACC 60.362 66.667 0.00 0.00 0.00 4.61
133 134 1.973281 CACACCTCCACATGCCCAC 60.973 63.158 0.00 0.00 0.00 4.61
134 135 2.005606 AACACACCTCCACATGCCCA 62.006 55.000 0.00 0.00 0.00 5.36
135 136 0.827507 AAACACACCTCCACATGCCC 60.828 55.000 0.00 0.00 0.00 5.36
136 137 0.598065 GAAACACACCTCCACATGCC 59.402 55.000 0.00 0.00 0.00 4.40
137 138 1.267806 CAGAAACACACCTCCACATGC 59.732 52.381 0.00 0.00 0.00 4.06
138 139 1.881973 CCAGAAACACACCTCCACATG 59.118 52.381 0.00 0.00 0.00 3.21
139 140 1.494721 ACCAGAAACACACCTCCACAT 59.505 47.619 0.00 0.00 0.00 3.21
140 141 0.916086 ACCAGAAACACACCTCCACA 59.084 50.000 0.00 0.00 0.00 4.17
141 142 1.308998 CACCAGAAACACACCTCCAC 58.691 55.000 0.00 0.00 0.00 4.02
142 143 0.182537 CCACCAGAAACACACCTCCA 59.817 55.000 0.00 0.00 0.00 3.86
143 144 0.472471 TCCACCAGAAACACACCTCC 59.528 55.000 0.00 0.00 0.00 4.30
144 145 2.039084 AGATCCACCAGAAACACACCTC 59.961 50.000 0.00 0.00 0.00 3.85
145 146 2.057922 AGATCCACCAGAAACACACCT 58.942 47.619 0.00 0.00 0.00 4.00
146 147 2.568623 AGATCCACCAGAAACACACC 57.431 50.000 0.00 0.00 0.00 4.16
147 148 5.091261 AGATAGATCCACCAGAAACACAC 57.909 43.478 0.00 0.00 0.00 3.82
148 149 5.762179 AAGATAGATCCACCAGAAACACA 57.238 39.130 0.00 0.00 0.00 3.72
149 150 5.355350 CCAAAGATAGATCCACCAGAAACAC 59.645 44.000 0.00 0.00 0.00 3.32
150 151 5.014123 ACCAAAGATAGATCCACCAGAAACA 59.986 40.000 0.00 0.00 0.00 2.83
151 152 5.355350 CACCAAAGATAGATCCACCAGAAAC 59.645 44.000 0.00 0.00 0.00 2.78
152 153 5.500234 CACCAAAGATAGATCCACCAGAAA 58.500 41.667 0.00 0.00 0.00 2.52
153 154 4.080356 CCACCAAAGATAGATCCACCAGAA 60.080 45.833 0.00 0.00 0.00 3.02
154 155 3.455910 CCACCAAAGATAGATCCACCAGA 59.544 47.826 0.00 0.00 0.00 3.86
155 156 3.455910 TCCACCAAAGATAGATCCACCAG 59.544 47.826 0.00 0.00 0.00 4.00
156 157 3.459828 TCCACCAAAGATAGATCCACCA 58.540 45.455 0.00 0.00 0.00 4.17
157 158 4.349342 AGATCCACCAAAGATAGATCCACC 59.651 45.833 0.00 0.00 35.08 4.61
158 159 5.303971 CAGATCCACCAAAGATAGATCCAC 58.696 45.833 0.00 0.00 35.08 4.02
159 160 4.202398 GCAGATCCACCAAAGATAGATCCA 60.202 45.833 0.00 0.00 35.08 3.41
160 161 4.041444 AGCAGATCCACCAAAGATAGATCC 59.959 45.833 0.00 0.00 35.08 3.36
161 162 5.226194 AGCAGATCCACCAAAGATAGATC 57.774 43.478 0.00 0.00 34.79 2.75
162 163 4.262377 CGAGCAGATCCACCAAAGATAGAT 60.262 45.833 0.00 0.00 0.00 1.98
163 164 3.068732 CGAGCAGATCCACCAAAGATAGA 59.931 47.826 0.00 0.00 0.00 1.98
164 165 3.388308 CGAGCAGATCCACCAAAGATAG 58.612 50.000 0.00 0.00 0.00 2.08
165 166 2.103094 CCGAGCAGATCCACCAAAGATA 59.897 50.000 0.00 0.00 0.00 1.98
166 167 1.134280 CCGAGCAGATCCACCAAAGAT 60.134 52.381 0.00 0.00 0.00 2.40
167 168 0.250234 CCGAGCAGATCCACCAAAGA 59.750 55.000 0.00 0.00 0.00 2.52
168 169 0.250234 TCCGAGCAGATCCACCAAAG 59.750 55.000 0.00 0.00 0.00 2.77
169 170 0.911769 ATCCGAGCAGATCCACCAAA 59.088 50.000 0.00 0.00 0.00 3.28
170 171 0.911769 AATCCGAGCAGATCCACCAA 59.088 50.000 0.00 0.00 0.00 3.67
171 172 0.911769 AAATCCGAGCAGATCCACCA 59.088 50.000 0.00 0.00 0.00 4.17
172 173 1.303309 CAAATCCGAGCAGATCCACC 58.697 55.000 0.00 0.00 0.00 4.61
173 174 1.303309 CCAAATCCGAGCAGATCCAC 58.697 55.000 0.00 0.00 0.00 4.02
174 175 0.911769 ACCAAATCCGAGCAGATCCA 59.088 50.000 0.00 0.00 0.00 3.41
175 176 1.672881 CAACCAAATCCGAGCAGATCC 59.327 52.381 0.00 0.00 0.00 3.36
176 177 2.359900 ACAACCAAATCCGAGCAGATC 58.640 47.619 0.00 0.00 0.00 2.75
177 178 2.496899 ACAACCAAATCCGAGCAGAT 57.503 45.000 0.00 0.00 0.00 2.90
178 179 2.151202 GAACAACCAAATCCGAGCAGA 58.849 47.619 0.00 0.00 0.00 4.26
179 180 1.135972 CGAACAACCAAATCCGAGCAG 60.136 52.381 0.00 0.00 0.00 4.24
180 181 0.871722 CGAACAACCAAATCCGAGCA 59.128 50.000 0.00 0.00 0.00 4.26
181 182 0.872388 ACGAACAACCAAATCCGAGC 59.128 50.000 0.00 0.00 0.00 5.03
182 183 2.413837 AGACGAACAACCAAATCCGAG 58.586 47.619 0.00 0.00 0.00 4.63
183 184 2.536761 AGACGAACAACCAAATCCGA 57.463 45.000 0.00 0.00 0.00 4.55
184 185 2.091588 CGTAGACGAACAACCAAATCCG 59.908 50.000 0.00 0.00 43.02 4.18
185 186 3.062042 ACGTAGACGAACAACCAAATCC 58.938 45.455 9.41 0.00 43.02 3.01
186 187 4.662394 CGAACGTAGACGAACAACCAAATC 60.662 45.833 9.41 0.00 43.02 2.17
187 188 3.182972 CGAACGTAGACGAACAACCAAAT 59.817 43.478 9.41 0.00 43.02 2.32
188 189 2.535166 CGAACGTAGACGAACAACCAAA 59.465 45.455 9.41 0.00 43.02 3.28
189 190 2.118683 CGAACGTAGACGAACAACCAA 58.881 47.619 9.41 0.00 43.02 3.67
190 191 1.065401 ACGAACGTAGACGAACAACCA 59.935 47.619 9.41 0.00 43.02 3.67
191 192 1.449418 CACGAACGTAGACGAACAACC 59.551 52.381 9.41 0.00 43.02 3.77
192 193 2.098211 CACACGAACGTAGACGAACAAC 60.098 50.000 9.41 0.00 43.02 3.32
193 194 2.110990 CACACGAACGTAGACGAACAA 58.889 47.619 9.41 0.00 43.02 2.83
194 195 1.063912 ACACACGAACGTAGACGAACA 59.936 47.619 9.41 0.00 43.02 3.18
195 196 1.746760 ACACACGAACGTAGACGAAC 58.253 50.000 9.41 1.55 43.02 3.95
196 197 2.473530 AACACACGAACGTAGACGAA 57.526 45.000 9.41 0.00 43.02 3.85
197 198 2.473530 AAACACACGAACGTAGACGA 57.526 45.000 9.41 0.00 43.02 4.20
198 199 2.531103 TGAAAACACACGAACGTAGACG 59.469 45.455 0.00 0.00 46.33 4.18
199 200 3.060740 CCTGAAAACACACGAACGTAGAC 60.061 47.826 0.00 0.00 0.00 2.59
200 201 3.117794 CCTGAAAACACACGAACGTAGA 58.882 45.455 0.00 0.00 0.00 2.59
201 202 2.861935 ACCTGAAAACACACGAACGTAG 59.138 45.455 0.00 0.00 0.00 3.51
202 203 2.891112 ACCTGAAAACACACGAACGTA 58.109 42.857 0.00 0.00 0.00 3.57
203 204 1.729284 ACCTGAAAACACACGAACGT 58.271 45.000 0.00 0.00 0.00 3.99
204 205 2.436670 CAACCTGAAAACACACGAACG 58.563 47.619 0.00 0.00 0.00 3.95
205 206 2.420722 TCCAACCTGAAAACACACGAAC 59.579 45.455 0.00 0.00 0.00 3.95
206 207 2.712709 TCCAACCTGAAAACACACGAA 58.287 42.857 0.00 0.00 0.00 3.85
207 208 2.404923 TCCAACCTGAAAACACACGA 57.595 45.000 0.00 0.00 0.00 4.35
208 209 2.031157 GGATCCAACCTGAAAACACACG 60.031 50.000 6.95 0.00 0.00 4.49
209 210 3.222603 AGGATCCAACCTGAAAACACAC 58.777 45.455 15.82 0.00 39.01 3.82
210 211 3.593442 AGGATCCAACCTGAAAACACA 57.407 42.857 15.82 0.00 39.01 3.72
211 212 3.255888 GGAAGGATCCAACCTGAAAACAC 59.744 47.826 15.82 0.00 45.79 3.32
212 213 3.496331 GGAAGGATCCAACCTGAAAACA 58.504 45.455 15.82 0.00 45.79 2.83
213 214 2.488153 CGGAAGGATCCAACCTGAAAAC 59.512 50.000 15.82 0.00 46.97 2.43
214 215 2.373836 TCGGAAGGATCCAACCTGAAAA 59.626 45.455 15.82 0.00 46.97 2.29
215 216 1.982226 TCGGAAGGATCCAACCTGAAA 59.018 47.619 15.82 0.34 46.97 2.69
216 217 1.651737 TCGGAAGGATCCAACCTGAA 58.348 50.000 15.82 2.65 46.97 3.02
217 218 1.762957 GATCGGAAGGATCCAACCTGA 59.237 52.381 15.82 16.44 46.97 3.86
218 219 2.246719 GATCGGAAGGATCCAACCTG 57.753 55.000 15.82 12.25 46.97 4.00
233 234 3.642705 TGATGAAGATTGCCGTAGATCG 58.357 45.455 0.00 0.00 39.52 3.69
234 235 4.447054 CACTGATGAAGATTGCCGTAGATC 59.553 45.833 0.00 0.00 0.00 2.75
235 236 4.375272 CACTGATGAAGATTGCCGTAGAT 58.625 43.478 0.00 0.00 0.00 1.98
236 237 3.430790 CCACTGATGAAGATTGCCGTAGA 60.431 47.826 0.00 0.00 0.00 2.59
237 238 2.868583 CCACTGATGAAGATTGCCGTAG 59.131 50.000 0.00 0.00 0.00 3.51
238 239 2.905075 CCACTGATGAAGATTGCCGTA 58.095 47.619 0.00 0.00 0.00 4.02
239 240 1.742761 CCACTGATGAAGATTGCCGT 58.257 50.000 0.00 0.00 0.00 5.68
240 241 0.379669 GCCACTGATGAAGATTGCCG 59.620 55.000 0.00 0.00 0.00 5.69
241 242 0.379669 CGCCACTGATGAAGATTGCC 59.620 55.000 0.00 0.00 0.00 4.52
242 243 0.379669 CCGCCACTGATGAAGATTGC 59.620 55.000 0.00 0.00 0.00 3.56
243 244 1.742761 ACCGCCACTGATGAAGATTG 58.257 50.000 0.00 0.00 0.00 2.67
244 245 2.086869 CAACCGCCACTGATGAAGATT 58.913 47.619 0.00 0.00 0.00 2.40
245 246 1.742761 CAACCGCCACTGATGAAGAT 58.257 50.000 0.00 0.00 0.00 2.40
246 247 0.955428 GCAACCGCCACTGATGAAGA 60.955 55.000 0.00 0.00 0.00 2.87
247 248 0.957395 AGCAACCGCCACTGATGAAG 60.957 55.000 0.00 0.00 39.83 3.02
248 249 1.073025 AGCAACCGCCACTGATGAA 59.927 52.632 0.00 0.00 39.83 2.57
249 250 1.672030 CAGCAACCGCCACTGATGA 60.672 57.895 0.00 0.00 39.83 2.92
250 251 1.518056 AACAGCAACCGCCACTGATG 61.518 55.000 0.00 0.00 39.83 3.07
251 252 1.228245 AACAGCAACCGCCACTGAT 60.228 52.632 0.00 0.00 39.83 2.90
252 253 1.891919 GAACAGCAACCGCCACTGA 60.892 57.895 0.00 0.00 39.83 3.41
253 254 1.893808 AGAACAGCAACCGCCACTG 60.894 57.895 0.00 0.00 39.83 3.66
254 255 1.893808 CAGAACAGCAACCGCCACT 60.894 57.895 0.00 0.00 39.83 4.00
255 256 1.237285 ATCAGAACAGCAACCGCCAC 61.237 55.000 0.00 0.00 39.83 5.01
256 257 1.073025 ATCAGAACAGCAACCGCCA 59.927 52.632 0.00 0.00 39.83 5.69
257 258 1.503542 CATCAGAACAGCAACCGCC 59.496 57.895 0.00 0.00 39.83 6.13
258 259 1.154150 GCATCAGAACAGCAACCGC 60.154 57.895 0.00 0.00 38.99 5.68
259 260 0.445436 GAGCATCAGAACAGCAACCG 59.555 55.000 0.00 0.00 33.17 4.44
260 261 1.818642 AGAGCATCAGAACAGCAACC 58.181 50.000 0.00 0.00 37.82 3.77
261 262 3.594134 ACTAGAGCATCAGAACAGCAAC 58.406 45.455 0.00 0.00 37.82 4.17
262 263 3.368843 GGACTAGAGCATCAGAACAGCAA 60.369 47.826 0.00 0.00 37.82 3.91
263 264 2.167281 GGACTAGAGCATCAGAACAGCA 59.833 50.000 0.00 0.00 37.82 4.41
264 265 2.430332 AGGACTAGAGCATCAGAACAGC 59.570 50.000 0.00 0.00 37.82 4.40
265 266 5.534278 TCATAGGACTAGAGCATCAGAACAG 59.466 44.000 0.00 0.00 37.82 3.16
266 267 5.449553 TCATAGGACTAGAGCATCAGAACA 58.550 41.667 0.00 0.00 37.82 3.18
267 268 5.048083 CCTCATAGGACTAGAGCATCAGAAC 60.048 48.000 0.00 0.00 37.67 3.01
268 269 5.076182 CCTCATAGGACTAGAGCATCAGAA 58.924 45.833 0.00 0.00 37.67 3.02
269 270 4.105537 ACCTCATAGGACTAGAGCATCAGA 59.894 45.833 0.00 0.00 37.67 3.27
270 271 4.406456 ACCTCATAGGACTAGAGCATCAG 58.594 47.826 0.00 0.00 37.67 2.90
271 272 4.105537 AGACCTCATAGGACTAGAGCATCA 59.894 45.833 0.00 0.00 38.58 3.07
272 273 4.662278 AGACCTCATAGGACTAGAGCATC 58.338 47.826 0.00 0.00 38.58 3.91
273 274 4.740154 AGACCTCATAGGACTAGAGCAT 57.260 45.455 0.00 0.00 38.58 3.79
274 275 4.528076 AAGACCTCATAGGACTAGAGCA 57.472 45.455 0.00 0.00 39.42 4.26
275 276 4.457949 GCTAAGACCTCATAGGACTAGAGC 59.542 50.000 12.81 12.81 39.42 4.09
276 277 5.472137 GTGCTAAGACCTCATAGGACTAGAG 59.528 48.000 0.00 2.18 39.42 2.43
277 278 5.378332 GTGCTAAGACCTCATAGGACTAGA 58.622 45.833 0.00 0.00 39.42 2.43
278 279 4.214545 CGTGCTAAGACCTCATAGGACTAG 59.785 50.000 0.00 0.00 39.42 2.57
279 280 4.135306 CGTGCTAAGACCTCATAGGACTA 58.865 47.826 0.00 0.00 39.42 2.59
280 281 2.952978 CGTGCTAAGACCTCATAGGACT 59.047 50.000 0.00 0.00 42.06 3.85
281 282 2.950309 TCGTGCTAAGACCTCATAGGAC 59.050 50.000 0.00 0.53 37.67 3.85
282 283 2.950309 GTCGTGCTAAGACCTCATAGGA 59.050 50.000 0.00 0.00 37.67 2.94
283 284 2.287069 CGTCGTGCTAAGACCTCATAGG 60.287 54.545 0.00 0.00 42.49 2.57
284 285 2.612672 TCGTCGTGCTAAGACCTCATAG 59.387 50.000 0.00 0.00 35.33 2.23
285 286 2.353889 GTCGTCGTGCTAAGACCTCATA 59.646 50.000 0.00 0.00 35.33 2.15
286 287 1.132643 GTCGTCGTGCTAAGACCTCAT 59.867 52.381 0.00 0.00 35.33 2.90
287 288 0.520404 GTCGTCGTGCTAAGACCTCA 59.480 55.000 0.00 0.00 35.33 3.86
288 289 0.803740 AGTCGTCGTGCTAAGACCTC 59.196 55.000 0.00 0.00 35.33 3.85
289 290 1.199558 GAAGTCGTCGTGCTAAGACCT 59.800 52.381 0.00 0.00 35.33 3.85
290 291 1.615502 GAAGTCGTCGTGCTAAGACC 58.384 55.000 0.00 0.00 35.33 3.85
291 292 1.615502 GGAAGTCGTCGTGCTAAGAC 58.384 55.000 0.00 0.00 35.41 3.01
292 293 0.524862 GGGAAGTCGTCGTGCTAAGA 59.475 55.000 0.00 0.00 0.00 2.10
293 294 0.797249 CGGGAAGTCGTCGTGCTAAG 60.797 60.000 0.00 0.00 0.00 2.18
294 295 1.210931 CGGGAAGTCGTCGTGCTAA 59.789 57.895 0.00 0.00 0.00 3.09
295 296 1.672030 TCGGGAAGTCGTCGTGCTA 60.672 57.895 0.00 0.00 0.00 3.49
296 297 2.981909 TCGGGAAGTCGTCGTGCT 60.982 61.111 0.00 0.00 0.00 4.40
297 298 2.804090 GTCGGGAAGTCGTCGTGC 60.804 66.667 0.00 0.00 0.00 5.34
298 299 1.442184 CAGTCGGGAAGTCGTCGTG 60.442 63.158 0.00 0.00 0.00 4.35
299 300 1.849976 GACAGTCGGGAAGTCGTCGT 61.850 60.000 0.00 0.00 0.00 4.34
300 301 1.154263 GACAGTCGGGAAGTCGTCG 60.154 63.158 0.00 0.00 0.00 5.12
301 302 1.130186 GTAGACAGTCGGGAAGTCGTC 59.870 57.143 0.00 0.00 37.36 4.20
302 303 1.163554 GTAGACAGTCGGGAAGTCGT 58.836 55.000 0.00 0.00 37.36 4.34
303 304 1.451067 AGTAGACAGTCGGGAAGTCG 58.549 55.000 0.00 0.00 37.36 4.18
304 305 3.341823 TGTAGTAGACAGTCGGGAAGTC 58.658 50.000 0.00 0.00 32.86 3.01
305 306 3.430042 TGTAGTAGACAGTCGGGAAGT 57.570 47.619 0.00 0.00 32.86 3.01
306 307 3.504906 TGTTGTAGTAGACAGTCGGGAAG 59.495 47.826 0.00 0.00 39.88 3.46
307 308 3.489355 TGTTGTAGTAGACAGTCGGGAA 58.511 45.455 0.00 0.00 39.88 3.97
308 309 3.144657 TGTTGTAGTAGACAGTCGGGA 57.855 47.619 0.00 0.00 39.88 5.14
309 310 3.255149 ACTTGTTGTAGTAGACAGTCGGG 59.745 47.826 0.00 0.00 39.88 5.14
310 311 4.500603 ACTTGTTGTAGTAGACAGTCGG 57.499 45.455 0.00 0.00 39.88 4.79
311 312 6.637365 CAAAACTTGTTGTAGTAGACAGTCG 58.363 40.000 0.00 0.00 39.88 4.18
312 313 6.419771 GCAAAACTTGTTGTAGTAGACAGTC 58.580 40.000 0.00 0.00 39.88 3.51
313 314 5.296035 GGCAAAACTTGTTGTAGTAGACAGT 59.704 40.000 0.00 0.00 39.88 3.55
314 315 5.277828 GGGCAAAACTTGTTGTAGTAGACAG 60.278 44.000 0.00 0.00 39.88 3.51
315 316 4.577283 GGGCAAAACTTGTTGTAGTAGACA 59.423 41.667 0.00 0.00 35.78 3.41
316 317 4.319261 CGGGCAAAACTTGTTGTAGTAGAC 60.319 45.833 0.00 0.00 0.00 2.59
317 318 3.810941 CGGGCAAAACTTGTTGTAGTAGA 59.189 43.478 0.00 0.00 0.00 2.59
318 319 3.058501 CCGGGCAAAACTTGTTGTAGTAG 60.059 47.826 0.00 0.00 0.00 2.57
319 320 2.879646 CCGGGCAAAACTTGTTGTAGTA 59.120 45.455 0.00 0.00 0.00 1.82
320 321 1.679153 CCGGGCAAAACTTGTTGTAGT 59.321 47.619 0.00 0.00 0.00 2.73
321 322 1.601914 GCCGGGCAAAACTTGTTGTAG 60.602 52.381 15.62 0.00 0.00 2.74
322 323 0.386113 GCCGGGCAAAACTTGTTGTA 59.614 50.000 15.62 0.00 0.00 2.41
323 324 1.142965 GCCGGGCAAAACTTGTTGT 59.857 52.632 15.62 0.00 0.00 3.32
324 325 1.142748 TGCCGGGCAAAACTTGTTG 59.857 52.632 21.55 0.00 34.76 3.33
325 326 1.142965 GTGCCGGGCAAAACTTGTT 59.857 52.632 25.70 0.00 41.47 2.83
326 327 2.791868 GGTGCCGGGCAAAACTTGT 61.792 57.895 25.70 0.00 41.47 3.16
327 328 2.028925 GGTGCCGGGCAAAACTTG 59.971 61.111 25.70 0.00 41.47 3.16
328 329 3.601685 CGGTGCCGGGCAAAACTT 61.602 61.111 25.70 0.00 41.47 2.66
347 348 3.917760 GTCATCGCCCCTCCCTCG 61.918 72.222 0.00 0.00 0.00 4.63
348 349 3.917760 CGTCATCGCCCCTCCCTC 61.918 72.222 0.00 0.00 0.00 4.30
375 376 2.734673 GCACTGAAGCGAGCCGAAG 61.735 63.158 0.00 0.00 0.00 3.79
376 377 2.715532 AAGCACTGAAGCGAGCCGAA 62.716 55.000 0.00 0.00 40.15 4.30
377 378 3.226429 AAGCACTGAAGCGAGCCGA 62.226 57.895 0.00 0.00 40.15 5.54
378 379 2.740055 AAGCACTGAAGCGAGCCG 60.740 61.111 0.00 0.00 40.15 5.52
379 380 0.670546 TACAAGCACTGAAGCGAGCC 60.671 55.000 0.00 0.00 40.15 4.70
380 381 0.718343 CTACAAGCACTGAAGCGAGC 59.282 55.000 0.00 0.00 40.15 5.03
381 382 1.989165 GACTACAAGCACTGAAGCGAG 59.011 52.381 0.00 0.00 40.15 5.03
382 383 1.666023 CGACTACAAGCACTGAAGCGA 60.666 52.381 0.00 0.00 40.15 4.93
383 384 0.710567 CGACTACAAGCACTGAAGCG 59.289 55.000 0.00 0.00 40.15 4.68
384 385 1.721926 GACGACTACAAGCACTGAAGC 59.278 52.381 0.00 0.00 0.00 3.86
385 386 1.979469 CGACGACTACAAGCACTGAAG 59.021 52.381 0.00 0.00 0.00 3.02
386 387 1.929038 GCGACGACTACAAGCACTGAA 60.929 52.381 0.00 0.00 0.00 3.02
387 388 0.386858 GCGACGACTACAAGCACTGA 60.387 55.000 0.00 0.00 0.00 3.41
388 389 0.387367 AGCGACGACTACAAGCACTG 60.387 55.000 0.00 0.00 0.00 3.66
389 390 1.130749 CTAGCGACGACTACAAGCACT 59.869 52.381 0.00 0.00 0.00 4.40
390 391 1.536149 CTAGCGACGACTACAAGCAC 58.464 55.000 0.00 0.00 0.00 4.40
391 392 0.450583 CCTAGCGACGACTACAAGCA 59.549 55.000 0.00 0.00 0.00 3.91
392 393 0.450983 ACCTAGCGACGACTACAAGC 59.549 55.000 0.00 0.00 0.00 4.01
393 394 1.202154 CCACCTAGCGACGACTACAAG 60.202 57.143 0.00 0.00 0.00 3.16
394 395 0.806868 CCACCTAGCGACGACTACAA 59.193 55.000 0.00 0.00 0.00 2.41
395 396 0.321919 ACCACCTAGCGACGACTACA 60.322 55.000 0.00 0.00 0.00 2.74
396 397 0.376502 GACCACCTAGCGACGACTAC 59.623 60.000 0.00 0.00 0.00 2.73
397 398 0.251354 AGACCACCTAGCGACGACTA 59.749 55.000 0.00 0.00 0.00 2.59
398 399 0.251354 TAGACCACCTAGCGACGACT 59.749 55.000 0.00 0.00 0.00 4.18
399 400 0.376502 GTAGACCACCTAGCGACGAC 59.623 60.000 0.00 0.00 0.00 4.34
400 401 1.086067 CGTAGACCACCTAGCGACGA 61.086 60.000 0.00 0.00 0.00 4.20
401 402 1.086067 TCGTAGACCACCTAGCGACG 61.086 60.000 0.00 0.00 31.20 5.12
402 403 1.089920 TTCGTAGACCACCTAGCGAC 58.910 55.000 0.00 0.00 34.32 5.19
403 404 1.945394 GATTCGTAGACCACCTAGCGA 59.055 52.381 0.00 0.00 34.32 4.93
404 405 1.948145 AGATTCGTAGACCACCTAGCG 59.052 52.381 0.00 0.00 34.32 4.26
405 406 2.950309 TCAGATTCGTAGACCACCTAGC 59.050 50.000 0.00 0.00 34.32 3.42
406 407 5.524284 CATTCAGATTCGTAGACCACCTAG 58.476 45.833 0.00 0.00 34.32 3.02
407 408 4.202121 GCATTCAGATTCGTAGACCACCTA 60.202 45.833 0.00 0.00 34.32 3.08
408 409 3.430929 GCATTCAGATTCGTAGACCACCT 60.431 47.826 0.00 0.00 34.32 4.00
409 410 2.866762 GCATTCAGATTCGTAGACCACC 59.133 50.000 0.00 0.00 34.32 4.61
410 411 3.521560 TGCATTCAGATTCGTAGACCAC 58.478 45.455 0.00 0.00 34.32 4.16
411 412 3.885724 TGCATTCAGATTCGTAGACCA 57.114 42.857 0.00 0.00 34.32 4.02
412 413 5.741388 AATTGCATTCAGATTCGTAGACC 57.259 39.130 0.00 0.00 34.32 3.85
440 441 9.114952 TGACAGTACAACAAACATCAGAAATAA 57.885 29.630 0.00 0.00 0.00 1.40
441 442 8.669946 TGACAGTACAACAAACATCAGAAATA 57.330 30.769 0.00 0.00 0.00 1.40
442 443 7.566760 TGACAGTACAACAAACATCAGAAAT 57.433 32.000 0.00 0.00 0.00 2.17
443 444 6.993786 TGACAGTACAACAAACATCAGAAA 57.006 33.333 0.00 0.00 0.00 2.52
444 445 8.669946 TTATGACAGTACAACAAACATCAGAA 57.330 30.769 0.00 0.00 0.00 3.02
445 446 8.846943 ATTATGACAGTACAACAAACATCAGA 57.153 30.769 0.00 0.00 0.00 3.27
504 505 5.859205 AAGCTCTGTCTTGGTGAATTTTT 57.141 34.783 0.00 0.00 0.00 1.94
505 506 5.452356 CCAAAGCTCTGTCTTGGTGAATTTT 60.452 40.000 6.03 0.00 0.00 1.82
506 507 4.038402 CCAAAGCTCTGTCTTGGTGAATTT 59.962 41.667 6.03 0.00 0.00 1.82
507 508 3.571401 CCAAAGCTCTGTCTTGGTGAATT 59.429 43.478 6.03 0.00 0.00 2.17
508 509 3.152341 CCAAAGCTCTGTCTTGGTGAAT 58.848 45.455 6.03 0.00 0.00 2.57
509 510 2.575532 CCAAAGCTCTGTCTTGGTGAA 58.424 47.619 6.03 0.00 0.00 3.18
510 511 1.202806 CCCAAAGCTCTGTCTTGGTGA 60.203 52.381 12.11 0.00 0.00 4.02
511 512 1.242076 CCCAAAGCTCTGTCTTGGTG 58.758 55.000 12.11 2.00 0.00 4.17
512 513 0.846693 ACCCAAAGCTCTGTCTTGGT 59.153 50.000 12.11 0.00 0.00 3.67
513 514 1.242076 CACCCAAAGCTCTGTCTTGG 58.758 55.000 7.08 7.08 0.00 3.61
514 515 0.595095 GCACCCAAAGCTCTGTCTTG 59.405 55.000 0.00 0.00 0.00 3.02
515 516 0.886490 CGCACCCAAAGCTCTGTCTT 60.886 55.000 0.00 0.00 0.00 3.01
516 517 1.302033 CGCACCCAAAGCTCTGTCT 60.302 57.895 0.00 0.00 0.00 3.41
517 518 2.328099 CCGCACCCAAAGCTCTGTC 61.328 63.158 0.00 0.00 0.00 3.51
518 519 2.129555 ATCCGCACCCAAAGCTCTGT 62.130 55.000 0.00 0.00 0.00 3.41
519 520 1.377725 ATCCGCACCCAAAGCTCTG 60.378 57.895 0.00 0.00 0.00 3.35
520 521 1.377725 CATCCGCACCCAAAGCTCT 60.378 57.895 0.00 0.00 0.00 4.09
579 580 3.984292 CGGTTTCGTACTAGCGAGT 57.016 52.632 4.47 4.47 42.10 4.18
617 618 1.566018 CTCTTCAAACCACGGGCGAC 61.566 60.000 0.00 0.00 0.00 5.19
635 636 0.468226 TCGCAAGTCCACAGAAACCT 59.532 50.000 0.00 0.00 39.48 3.50
647 648 3.993081 CACAAGAGAGAGAAATCGCAAGT 59.007 43.478 0.00 0.00 39.48 3.16
651 652 4.377841 CCAAACACAAGAGAGAGAAATCGC 60.378 45.833 0.00 0.00 0.00 4.58
652 653 4.752101 ACCAAACACAAGAGAGAGAAATCG 59.248 41.667 0.00 0.00 0.00 3.34
669 673 2.096013 GGCAGCTTCGATTAGACCAAAC 59.904 50.000 0.00 0.00 0.00 2.93
687 691 3.243704 GCTAGTTGTCAAAAACATGGGCA 60.244 43.478 0.00 0.00 37.82 5.36
692 696 4.887071 TGGTGAGCTAGTTGTCAAAAACAT 59.113 37.500 0.00 0.00 37.82 2.71
715 719 6.936335 GTGATTGGGGAATTTCAGAACAAAAT 59.064 34.615 0.00 0.00 0.00 1.82
781 789 5.392380 CGGTCAGATTCCCATTCAGAAAAAG 60.392 44.000 0.00 0.00 0.00 2.27
788 796 3.071023 GGATACGGTCAGATTCCCATTCA 59.929 47.826 0.00 0.00 0.00 2.57
791 799 2.689658 TGGATACGGTCAGATTCCCAT 58.310 47.619 0.00 0.00 42.51 4.00
818 826 4.525949 GGGCCCTACGTCGGCTTC 62.526 72.222 17.04 13.13 46.24 3.86
1026 1078 3.449918 AGAAGAGGAGGAAGAAGAAGGG 58.550 50.000 0.00 0.00 0.00 3.95
1403 1865 2.127528 GAGGGGAAGGGGGAAGGT 59.872 66.667 0.00 0.00 0.00 3.50
1405 1867 2.696504 GGGAGGGGAAGGGGGAAG 60.697 72.222 0.00 0.00 0.00 3.46
1406 1868 4.381121 GGGGAGGGGAAGGGGGAA 62.381 72.222 0.00 0.00 0.00 3.97
1600 2101 4.202264 CCACTGATTCACCACTACTATCCC 60.202 50.000 0.00 0.00 0.00 3.85
1624 2125 4.010667 ACCAAATCACGGTTTAGTGCTA 57.989 40.909 0.00 0.00 41.61 3.49
1629 2130 2.413634 GCCGAACCAAATCACGGTTTAG 60.414 50.000 0.00 0.00 46.80 1.85
1699 2203 2.639839 ACTATGACAACCAGACAAGCCT 59.360 45.455 0.00 0.00 0.00 4.58
1706 2214 6.070995 CCACCTAAGTTACTATGACAACCAGA 60.071 42.308 0.00 0.00 0.00 3.86
1710 2218 9.880157 TTTATCCACCTAAGTTACTATGACAAC 57.120 33.333 0.00 0.00 0.00 3.32
1765 2274 0.466189 AGGCGCATCCCATCGATTTT 60.466 50.000 10.83 0.00 34.51 1.82
1803 2312 7.118245 CAGACAAACAGTTATAGAGTGATTGCA 59.882 37.037 4.43 0.00 42.22 4.08
1829 2338 6.268566 GTTTGATGGCTTTTCTGATGGATAC 58.731 40.000 0.00 0.00 0.00 2.24
1830 2339 5.360714 GGTTTGATGGCTTTTCTGATGGATA 59.639 40.000 0.00 0.00 0.00 2.59
1876 2389 0.912486 AACAGGGGGAGTATCACTGC 59.088 55.000 0.00 0.00 39.68 4.40
1920 2433 4.032960 TCAATAAGCCAATGTGGAGTGT 57.967 40.909 0.00 0.00 40.96 3.55
1925 2438 3.866910 GCATGTTCAATAAGCCAATGTGG 59.133 43.478 0.00 0.00 41.55 4.17
1931 2444 3.871006 CGTAGAGCATGTTCAATAAGCCA 59.129 43.478 12.41 0.00 0.00 4.75
1953 2466 1.791204 GCCTTAATACGCCTAAGTCGC 59.209 52.381 0.00 0.00 0.00 5.19
1964 2478 3.999663 CTGCATAGCTGGAGCCTTAATAC 59.000 47.826 0.00 0.00 43.38 1.89
2048 2563 3.141398 TCAGTGGCAGCTTTAAACTGAG 58.859 45.455 16.88 0.00 41.63 3.35
2049 2564 3.141398 CTCAGTGGCAGCTTTAAACTGA 58.859 45.455 16.88 14.35 43.64 3.41
2050 2565 2.227388 CCTCAGTGGCAGCTTTAAACTG 59.773 50.000 11.27 11.27 39.66 3.16
2089 2604 2.825532 ACATTTAAGCAAACTCGGCCAT 59.174 40.909 2.24 0.00 0.00 4.40
2229 2744 9.828039 TCAGCTATGCTAATATGATCCATAAAG 57.172 33.333 0.00 0.00 36.40 1.85
2303 2818 9.892130 CCTAGTTAAGTTCAGAAGTTGGATATT 57.108 33.333 12.83 0.00 0.00 1.28
2383 2898 2.383855 AGGCCAAGTGCTGTTGTTTAA 58.616 42.857 5.01 0.00 40.92 1.52
2389 2904 3.132084 GCAAGGCCAAGTGCTGTT 58.868 55.556 16.44 0.00 40.92 3.16
2432 2947 7.592885 ATCAGCTATGCTTTTATGAACCATT 57.407 32.000 0.00 0.00 36.40 3.16
2437 2952 6.732154 GCTCAATCAGCTATGCTTTTATGAA 58.268 36.000 0.00 0.00 45.83 2.57
2700 3221 5.078411 AGTGCTAAATACCAGACACTCTG 57.922 43.478 0.00 0.00 43.91 3.35
2704 3225 6.148811 TGCTTAAAGTGCTAAATACCAGACAC 59.851 38.462 0.00 0.00 0.00 3.67
2818 3339 6.456988 GCACAATAAAATTCAGAGTACCGGAG 60.457 42.308 9.46 0.00 0.00 4.63
2850 3371 4.447762 GGCCATCACTTAAATGGGGAGTAT 60.448 45.833 0.00 0.00 43.32 2.12
2851 3372 3.117663 GGCCATCACTTAAATGGGGAGTA 60.118 47.826 0.00 0.00 43.32 2.59
2947 3468 8.941977 GGTAAACATCACATAATGACAACTACA 58.058 33.333 0.00 0.00 41.24 2.74
2964 3485 6.545666 TCACATATGGGTCATTGGTAAACATC 59.454 38.462 4.54 0.00 0.00 3.06
2986 3507 4.781071 GAATGGATTCGCTGATCATTCAC 58.219 43.478 0.00 0.00 31.40 3.18
3124 3646 5.578005 TCTGGTCTCGGTTTACTAGAATG 57.422 43.478 0.00 0.00 31.22 2.67
3144 3666 7.524717 AGTGCTGTTGTTTATATTGGTTTCT 57.475 32.000 0.00 0.00 0.00 2.52
3350 3872 6.808321 AGTATGGATTTTACTACAGCCTGA 57.192 37.500 0.00 0.00 0.00 3.86
3432 3963 4.036498 CAGGAGGCTGAATCAAATGATGAC 59.964 45.833 0.00 0.00 41.93 3.06
3433 3964 4.204799 CAGGAGGCTGAATCAAATGATGA 58.795 43.478 0.00 0.00 43.67 2.92
3434 3965 3.243434 GCAGGAGGCTGAATCAAATGATG 60.243 47.826 0.00 0.00 40.25 3.07
3515 4517 7.861629 AGATTCTATAGATCCAACAACACCAA 58.138 34.615 2.58 0.00 0.00 3.67
3554 4556 7.223584 TGTTAGGACAATCATCTTCTCAACAA 58.776 34.615 0.00 0.00 31.49 2.83
3587 4589 8.324306 TCATGAGAACCTTATCAAGAATGTCTT 58.676 33.333 0.00 0.00 37.14 3.01
3588 4590 7.855375 TCATGAGAACCTTATCAAGAATGTCT 58.145 34.615 0.00 0.00 31.53 3.41
3632 4634 7.508977 AGATTGTGGGATTTCAAAAGTAGGAAA 59.491 33.333 0.00 0.00 37.41 3.13
3708 4710 5.365895 ACTGTACTACCTAAGCCCCTAAATG 59.634 44.000 0.00 0.00 0.00 2.32
3738 4740 7.875327 AAAGAAATTGGTATACCGCAACTAT 57.125 32.000 17.13 0.00 39.43 2.12
3925 4927 0.409876 TCAGGGAGCTGTAGGTCTGT 59.590 55.000 10.51 0.00 41.88 3.41
4038 5040 3.031736 TCAGTATCTTCACCAGCCCTAC 58.968 50.000 0.00 0.00 0.00 3.18
4039 5041 3.398318 TCAGTATCTTCACCAGCCCTA 57.602 47.619 0.00 0.00 0.00 3.53
4046 5048 7.548097 TGTCATACTTCTTCAGTATCTTCACC 58.452 38.462 0.00 0.00 44.32 4.02
4088 5090 2.828520 CTGAGTGAAAGGTAGGCTGAGA 59.171 50.000 0.00 0.00 0.00 3.27
4139 5141 3.188159 ACAAGTCTTGTTAACGGCTCA 57.812 42.857 12.62 0.00 42.22 4.26
4199 5201 4.495019 CCAGACTCGAGTACTTCATCTTCG 60.495 50.000 20.09 3.47 0.00 3.79
4358 5366 1.405526 GCGAGAGACAGGGCATTGTAA 60.406 52.381 0.00 0.00 0.00 2.41
4376 5384 1.757118 TCTCCATGGAAGAACCTAGCG 59.243 52.381 17.00 0.00 39.86 4.26
4403 5411 3.353836 GCGCCCGAACAAGCTTCA 61.354 61.111 0.00 0.00 0.00 3.02
4409 5417 0.606944 AAGTTATGGCGCCCGAACAA 60.607 50.000 30.97 13.07 0.00 2.83
4415 5423 0.178068 TCTCAGAAGTTATGGCGCCC 59.822 55.000 26.77 8.39 0.00 6.13
4427 5435 0.961753 TTGACAGCGAGCTCTCAGAA 59.038 50.000 12.85 0.00 0.00 3.02
4446 5454 3.334881 ACCTGGGAATCTGTCAAGGAATT 59.665 43.478 0.00 0.00 35.89 2.17
4452 5460 3.394274 TCTTCAACCTGGGAATCTGTCAA 59.606 43.478 0.00 0.00 0.00 3.18
4469 5477 4.944619 ATCGTCCTTATCTGCATCTTCA 57.055 40.909 0.00 0.00 0.00 3.02
4478 5486 3.574826 GCACCTCCTTATCGTCCTTATCT 59.425 47.826 0.00 0.00 0.00 1.98
4481 5489 2.742348 TGCACCTCCTTATCGTCCTTA 58.258 47.619 0.00 0.00 0.00 2.69
4485 5493 3.179443 TGATTGCACCTCCTTATCGTC 57.821 47.619 0.00 0.00 0.00 4.20
4490 5498 3.873801 GCTCCTTTGATTGCACCTCCTTA 60.874 47.826 0.00 0.00 0.00 2.69
4493 5501 0.813821 GCTCCTTTGATTGCACCTCC 59.186 55.000 0.00 0.00 0.00 4.30
4526 5534 1.278238 CTTCCGCGTTATGGTCAGTC 58.722 55.000 4.92 0.00 0.00 3.51
4599 5607 9.539825 AGCAGTTCTATCATTTACACTTATCAG 57.460 33.333 0.00 0.00 0.00 2.90
4675 5683 7.148540 CCAAGCATCCAAATAAAACATGACTTG 60.149 37.037 0.00 0.00 33.32 3.16
4719 5728 4.621068 AATGTCACACACACACTTTCTG 57.379 40.909 0.00 0.00 38.04 3.02
4727 5736 5.362556 AATCAGCTAAATGTCACACACAC 57.637 39.130 0.00 0.00 38.04 3.82
4728 5737 5.530543 TCAAATCAGCTAAATGTCACACACA 59.469 36.000 0.00 0.00 40.18 3.72
4755 5764 7.433719 CAGAGAGACTGTATACAATTCCTTTCG 59.566 40.741 7.06 0.00 41.30 3.46
4803 5812 4.094294 GCGACATCAGTGGCTATACAAAAA 59.906 41.667 0.00 0.00 44.87 1.94
4804 5813 3.621268 GCGACATCAGTGGCTATACAAAA 59.379 43.478 0.00 0.00 44.87 2.44
4805 5814 3.194861 GCGACATCAGTGGCTATACAAA 58.805 45.455 0.00 0.00 44.87 2.83
4806 5815 2.821546 GCGACATCAGTGGCTATACAA 58.178 47.619 0.00 0.00 44.87 2.41
4807 5816 2.509052 GCGACATCAGTGGCTATACA 57.491 50.000 0.00 0.00 44.87 2.29
4865 5906 2.333926 TCAAATTCACTGTACGAGCCG 58.666 47.619 0.00 0.00 0.00 5.52
5189 6237 2.583441 TTGGTGCCGACAGGAGGAG 61.583 63.158 0.00 0.00 41.02 3.69
5190 6238 2.525629 TTGGTGCCGACAGGAGGA 60.526 61.111 0.00 0.00 41.02 3.71
5191 6239 2.358737 GTTGGTGCCGACAGGAGG 60.359 66.667 3.80 0.00 41.02 4.30
5257 6305 2.758737 CGACTAGGGCCCGAGGTT 60.759 66.667 32.53 15.46 0.00 3.50
5288 6336 3.071167 AGACGCTGGACCTAAAAAGAACT 59.929 43.478 0.00 0.00 0.00 3.01
5342 6396 8.723942 ACATATGAGACATTTTTCCTACTGAC 57.276 34.615 10.38 0.00 0.00 3.51
5363 6417 5.846164 ACCATCAGGACATGGATAGAACATA 59.154 40.000 6.48 0.00 45.79 2.29
5388 6443 1.437772 CCTCCGACGATGCTAGACGT 61.438 60.000 9.14 9.14 45.32 4.34
5417 6472 3.687125 TGAGATCCTACGAAGACACACT 58.313 45.455 0.00 0.00 0.00 3.55
5494 6549 3.818773 CCTGTAAACACCCAAACGAAGAT 59.181 43.478 0.00 0.00 0.00 2.40
5574 6629 3.072468 TAAGGCCCCGTGAGACCG 61.072 66.667 0.00 0.00 0.00 4.79
5580 6635 0.828022 TGTCATACTAAGGCCCCGTG 59.172 55.000 0.00 0.00 0.00 4.94
5607 6662 7.279090 GGGCAAATTTTGTTGTAGTAAACAGTT 59.721 33.333 10.65 0.00 40.93 3.16
5625 6680 0.034186 TCATCGGAGCTGGGCAAATT 60.034 50.000 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.