Multiple sequence alignment - TraesCS5D01G505500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G505500 chr5D 100.000 2387 0 0 1 2387 531463644 531461258 0.000000e+00 4409.0
1 TraesCS5D01G505500 chr5D 87.363 823 46 27 604 1389 531476881 531476080 0.000000e+00 891.0
2 TraesCS5D01G505500 chr5D 82.654 859 94 33 594 1400 531412546 531411691 0.000000e+00 710.0
3 TraesCS5D01G505500 chr5D 80.168 832 100 33 601 1390 531445516 531444708 1.600000e-156 562.0
4 TraesCS5D01G505500 chr5D 83.486 327 16 21 76 366 531477395 531477071 1.090000e-68 270.0
5 TraesCS5D01G505500 chr5D 88.820 161 12 3 600 759 531418549 531418394 2.420000e-45 193.0
6 TraesCS5D01G505500 chr5D 100.000 36 0 0 77 112 531474459 531474424 1.530000e-07 67.6
7 TraesCS5D01G505500 chr4A 87.623 816 71 18 600 1395 640916097 640916902 0.000000e+00 920.0
8 TraesCS5D01G505500 chr4A 85.582 867 75 21 670 1516 640921779 640922615 0.000000e+00 863.0
9 TraesCS5D01G505500 chr4A 81.737 898 95 34 588 1429 640999781 641000665 0.000000e+00 686.0
10 TraesCS5D01G505500 chr4A 80.364 769 91 43 673 1395 640944528 640945282 1.620000e-146 529.0
11 TraesCS5D01G505500 chr4A 84.635 397 31 10 220 600 640903549 640903931 3.750000e-98 368.0
12 TraesCS5D01G505500 chr4A 87.805 246 24 5 120 365 640914191 640914430 1.400000e-72 283.0
13 TraesCS5D01G505500 chr4A 92.857 84 6 0 2304 2387 640928017 640928100 3.220000e-24 122.0
14 TraesCS5D01G505500 chr5B 80.376 1065 95 48 846 1819 670798423 670797382 0.000000e+00 704.0
15 TraesCS5D01G505500 chr5B 81.818 836 96 32 601 1401 670717196 670716382 0.000000e+00 651.0
16 TraesCS5D01G505500 chr5B 79.714 838 97 42 603 1400 670695075 670694271 2.700000e-149 538.0
17 TraesCS5D01G505500 chr5B 92.086 139 8 2 212 349 670806491 670806355 2.420000e-45 193.0
18 TraesCS5D01G505500 chr5B 88.596 114 9 3 1816 1928 670797351 670797241 4.140000e-28 135.0
19 TraesCS5D01G505500 chr5B 83.226 155 15 5 707 850 670800325 670800171 5.350000e-27 132.0
20 TraesCS5D01G505500 chr5B 95.349 43 2 0 78 120 670735591 670735549 4.260000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G505500 chr5D 531461258 531463644 2386 True 4409.000000 4409 100.000 1 2387 1 chr5D.!!$R4 2386
1 TraesCS5D01G505500 chr5D 531411691 531412546 855 True 710.000000 710 82.654 594 1400 1 chr5D.!!$R1 806
2 TraesCS5D01G505500 chr5D 531444708 531445516 808 True 562.000000 562 80.168 601 1390 1 chr5D.!!$R3 789
3 TraesCS5D01G505500 chr5D 531474424 531477395 2971 True 409.533333 891 90.283 76 1389 3 chr5D.!!$R5 1313
4 TraesCS5D01G505500 chr4A 640921779 640922615 836 False 863.000000 863 85.582 670 1516 1 chr4A.!!$F2 846
5 TraesCS5D01G505500 chr4A 640999781 641000665 884 False 686.000000 686 81.737 588 1429 1 chr4A.!!$F5 841
6 TraesCS5D01G505500 chr4A 640914191 640916902 2711 False 601.500000 920 87.714 120 1395 2 chr4A.!!$F6 1275
7 TraesCS5D01G505500 chr4A 640944528 640945282 754 False 529.000000 529 80.364 673 1395 1 chr4A.!!$F4 722
8 TraesCS5D01G505500 chr5B 670716382 670717196 814 True 651.000000 651 81.818 601 1401 1 chr5B.!!$R2 800
9 TraesCS5D01G505500 chr5B 670694271 670695075 804 True 538.000000 538 79.714 603 1400 1 chr5B.!!$R1 797
10 TraesCS5D01G505500 chr5B 670797241 670800325 3084 True 323.666667 704 84.066 707 1928 3 chr5B.!!$R5 1221

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
447 489 0.03716 ATCTGCACTGACACATGCCA 59.963 50.0 0.0 0.0 41.33 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2212 6547 0.039035 TACCAAGTGTTCCCCATGGC 59.961 55.0 6.09 0.0 34.45 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.514592 CGGGGCATGCTGTACTGG 60.515 66.667 18.92 0.00 0.00 4.00
18 19 2.830370 GGGGCATGCTGTACTGGC 60.830 66.667 18.92 0.00 37.22 4.85
20 21 3.204827 GGCATGCTGTACTGGCCG 61.205 66.667 18.92 0.00 34.56 6.13
21 22 2.436646 GCATGCTGTACTGGCCGT 60.437 61.111 11.37 1.25 0.00 5.68
22 23 2.753966 GCATGCTGTACTGGCCGTG 61.754 63.158 11.37 2.39 0.00 4.94
23 24 1.079197 CATGCTGTACTGGCCGTGA 60.079 57.895 10.01 0.00 0.00 4.35
24 25 1.079127 ATGCTGTACTGGCCGTGAC 60.079 57.895 10.01 2.45 0.00 3.67
25 26 1.826340 ATGCTGTACTGGCCGTGACA 61.826 55.000 10.01 6.83 0.00 3.58
26 27 1.079127 GCTGTACTGGCCGTGACAT 60.079 57.895 10.01 0.00 0.00 3.06
27 28 0.174845 GCTGTACTGGCCGTGACATA 59.825 55.000 10.01 0.00 0.00 2.29
28 29 1.404986 GCTGTACTGGCCGTGACATAA 60.405 52.381 10.01 0.00 0.00 1.90
29 30 2.741878 GCTGTACTGGCCGTGACATAAT 60.742 50.000 10.01 0.00 0.00 1.28
30 31 2.866156 CTGTACTGGCCGTGACATAATG 59.134 50.000 10.01 0.00 0.00 1.90
31 32 2.498078 TGTACTGGCCGTGACATAATGA 59.502 45.455 10.01 0.00 0.00 2.57
32 33 2.024176 ACTGGCCGTGACATAATGAC 57.976 50.000 0.00 0.00 0.00 3.06
33 34 1.555075 ACTGGCCGTGACATAATGACT 59.445 47.619 0.00 0.00 0.00 3.41
34 35 2.764010 ACTGGCCGTGACATAATGACTA 59.236 45.455 0.00 0.00 0.00 2.59
35 36 3.123804 CTGGCCGTGACATAATGACTAC 58.876 50.000 0.00 0.00 0.00 2.73
36 37 2.159014 TGGCCGTGACATAATGACTACC 60.159 50.000 0.00 0.00 0.00 3.18
37 38 2.159014 GGCCGTGACATAATGACTACCA 60.159 50.000 0.00 0.00 0.00 3.25
38 39 3.494398 GGCCGTGACATAATGACTACCAT 60.494 47.826 0.00 0.00 36.99 3.55
39 40 4.127171 GCCGTGACATAATGACTACCATT 58.873 43.478 0.00 0.00 46.52 3.16
40 41 4.024893 GCCGTGACATAATGACTACCATTG 60.025 45.833 0.00 0.00 44.67 2.82
41 42 5.356426 CCGTGACATAATGACTACCATTGA 58.644 41.667 0.00 0.00 44.67 2.57
42 43 5.234329 CCGTGACATAATGACTACCATTGAC 59.766 44.000 0.00 0.00 44.67 3.18
43 44 5.234329 CGTGACATAATGACTACCATTGACC 59.766 44.000 0.00 0.00 44.67 4.02
44 45 5.234329 GTGACATAATGACTACCATTGACCG 59.766 44.000 0.00 0.00 44.67 4.79
45 46 5.105106 TGACATAATGACTACCATTGACCGT 60.105 40.000 0.00 0.00 44.67 4.83
46 47 5.357257 ACATAATGACTACCATTGACCGTC 58.643 41.667 0.00 0.00 44.67 4.79
47 48 2.579207 ATGACTACCATTGACCGTCG 57.421 50.000 0.00 0.00 29.34 5.12
48 49 1.250328 TGACTACCATTGACCGTCGT 58.750 50.000 0.00 0.00 0.00 4.34
49 50 1.614903 TGACTACCATTGACCGTCGTT 59.385 47.619 0.00 0.00 0.00 3.85
50 51 1.990563 GACTACCATTGACCGTCGTTG 59.009 52.381 0.00 0.00 0.00 4.10
51 52 1.342174 ACTACCATTGACCGTCGTTGT 59.658 47.619 0.00 0.00 0.00 3.32
52 53 2.224113 ACTACCATTGACCGTCGTTGTT 60.224 45.455 0.00 0.00 0.00 2.83
53 54 2.529780 ACCATTGACCGTCGTTGTTA 57.470 45.000 0.00 0.00 0.00 2.41
54 55 2.409975 ACCATTGACCGTCGTTGTTAG 58.590 47.619 0.00 0.00 0.00 2.34
55 56 1.127951 CCATTGACCGTCGTTGTTAGC 59.872 52.381 0.00 0.00 0.00 3.09
56 57 1.795872 CATTGACCGTCGTTGTTAGCA 59.204 47.619 0.00 0.00 0.00 3.49
57 58 1.493772 TTGACCGTCGTTGTTAGCAG 58.506 50.000 0.00 0.00 0.00 4.24
58 59 0.319211 TGACCGTCGTTGTTAGCAGG 60.319 55.000 0.00 0.00 0.00 4.85
59 60 0.038892 GACCGTCGTTGTTAGCAGGA 60.039 55.000 0.00 0.00 0.00 3.86
60 61 0.038526 ACCGTCGTTGTTAGCAGGAG 60.039 55.000 0.00 0.00 0.00 3.69
61 62 0.038526 CCGTCGTTGTTAGCAGGAGT 60.039 55.000 0.00 0.00 0.00 3.85
62 63 1.200716 CCGTCGTTGTTAGCAGGAGTA 59.799 52.381 0.00 0.00 0.00 2.59
63 64 2.159282 CCGTCGTTGTTAGCAGGAGTAT 60.159 50.000 0.00 0.00 0.00 2.12
64 65 3.065786 CCGTCGTTGTTAGCAGGAGTATA 59.934 47.826 0.00 0.00 0.00 1.47
65 66 4.033684 CGTCGTTGTTAGCAGGAGTATAC 58.966 47.826 0.00 0.00 0.00 1.47
66 67 4.033684 GTCGTTGTTAGCAGGAGTATACG 58.966 47.826 0.00 0.00 0.00 3.06
67 68 3.691118 TCGTTGTTAGCAGGAGTATACGT 59.309 43.478 0.00 0.00 0.00 3.57
68 69 4.875536 TCGTTGTTAGCAGGAGTATACGTA 59.124 41.667 0.00 0.00 0.00 3.57
69 70 5.528690 TCGTTGTTAGCAGGAGTATACGTAT 59.471 40.000 13.54 13.54 0.00 3.06
70 71 6.038603 TCGTTGTTAGCAGGAGTATACGTATT 59.961 38.462 14.33 0.00 0.00 1.89
71 72 7.226523 TCGTTGTTAGCAGGAGTATACGTATTA 59.773 37.037 14.33 0.00 0.00 0.98
72 73 8.019669 CGTTGTTAGCAGGAGTATACGTATTAT 58.980 37.037 14.33 2.48 0.00 1.28
187 206 2.476320 GCCAATGCCGCTTCCTCTC 61.476 63.158 0.00 0.00 0.00 3.20
202 221 3.529533 TCCTCTCTTCGTTCTACTACCG 58.470 50.000 0.00 0.00 0.00 4.02
203 222 2.031930 CCTCTCTTCGTTCTACTACCGC 59.968 54.545 0.00 0.00 0.00 5.68
209 228 4.157289 TCTTCGTTCTACTACCGCTCAAAT 59.843 41.667 0.00 0.00 0.00 2.32
231 260 8.733458 CAAATCTAAATCTCTGTTCCATGTTCA 58.267 33.333 0.00 0.00 0.00 3.18
237 266 5.392767 TCTCTGTTCCATGTTCAGACTAC 57.607 43.478 7.37 0.00 34.97 2.73
329 358 4.457949 AGGGGCGAAACAGTAATAAAACAG 59.542 41.667 0.00 0.00 0.00 3.16
334 363 7.435784 GGGCGAAACAGTAATAAAACAGAAAAA 59.564 33.333 0.00 0.00 0.00 1.94
335 364 8.476925 GGCGAAACAGTAATAAAACAGAAAAAG 58.523 33.333 0.00 0.00 0.00 2.27
336 365 8.476925 GCGAAACAGTAATAAAACAGAAAAAGG 58.523 33.333 0.00 0.00 0.00 3.11
337 366 9.511144 CGAAACAGTAATAAAACAGAAAAAGGT 57.489 29.630 0.00 0.00 0.00 3.50
348 383 1.688735 AGAAAAAGGTCAAAGCCTGCC 59.311 47.619 0.00 0.00 39.17 4.85
366 408 1.504359 CCGAGCAAACGGTTACAAGA 58.496 50.000 8.46 0.00 46.70 3.02
367 409 1.459592 CCGAGCAAACGGTTACAAGAG 59.540 52.381 8.46 0.00 46.70 2.85
370 412 3.335579 GAGCAAACGGTTACAAGAGGAT 58.664 45.455 0.00 0.00 0.00 3.24
371 413 4.501071 GAGCAAACGGTTACAAGAGGATA 58.499 43.478 0.00 0.00 0.00 2.59
373 415 5.310451 AGCAAACGGTTACAAGAGGATAAA 58.690 37.500 0.00 0.00 0.00 1.40
374 416 5.766174 AGCAAACGGTTACAAGAGGATAAAA 59.234 36.000 0.00 0.00 0.00 1.52
376 418 6.526674 GCAAACGGTTACAAGAGGATAAAATG 59.473 38.462 0.00 0.00 0.00 2.32
377 419 5.813080 ACGGTTACAAGAGGATAAAATGC 57.187 39.130 0.00 0.00 0.00 3.56
378 420 4.331717 ACGGTTACAAGAGGATAAAATGCG 59.668 41.667 0.00 0.00 0.00 4.73
379 421 4.598062 GGTTACAAGAGGATAAAATGCGC 58.402 43.478 0.00 0.00 0.00 6.09
380 422 4.095782 GGTTACAAGAGGATAAAATGCGCA 59.904 41.667 14.96 14.96 0.00 6.09
381 423 3.764885 ACAAGAGGATAAAATGCGCAC 57.235 42.857 14.90 0.00 0.00 5.34
382 424 2.423538 ACAAGAGGATAAAATGCGCACC 59.576 45.455 14.90 8.62 0.00 5.01
383 425 2.418368 AGAGGATAAAATGCGCACCA 57.582 45.000 14.90 0.00 0.00 4.17
384 426 2.722094 AGAGGATAAAATGCGCACCAA 58.278 42.857 14.90 0.00 0.00 3.67
385 427 2.423538 AGAGGATAAAATGCGCACCAAC 59.576 45.455 14.90 6.90 0.00 3.77
386 428 1.132262 AGGATAAAATGCGCACCAACG 59.868 47.619 14.90 0.00 0.00 4.10
387 429 1.544686 GATAAAATGCGCACCAACGG 58.455 50.000 14.90 0.00 0.00 4.44
388 430 0.172352 ATAAAATGCGCACCAACGGG 59.828 50.000 14.90 0.00 41.29 5.28
389 431 1.867919 TAAAATGCGCACCAACGGGG 61.868 55.000 14.90 0.00 44.81 5.73
405 447 2.363147 GGGTGGCCCCGCAAAATA 60.363 61.111 0.00 0.00 42.41 1.40
406 448 1.760480 GGGTGGCCCCGCAAAATAT 60.760 57.895 0.00 0.00 42.41 1.28
407 449 1.441311 GGTGGCCCCGCAAAATATG 59.559 57.895 0.00 0.00 0.00 1.78
425 467 7.826260 AAATATGCAATAGTTTTTGGAACGG 57.174 32.000 0.00 0.00 32.47 4.44
426 468 6.767524 ATATGCAATAGTTTTTGGAACGGA 57.232 33.333 0.00 0.00 30.43 4.69
427 469 4.920640 TGCAATAGTTTTTGGAACGGAA 57.079 36.364 0.00 0.00 0.00 4.30
428 470 5.263968 TGCAATAGTTTTTGGAACGGAAA 57.736 34.783 0.00 0.00 0.00 3.13
429 471 5.848406 TGCAATAGTTTTTGGAACGGAAAT 58.152 33.333 0.00 0.00 0.00 2.17
430 472 5.923684 TGCAATAGTTTTTGGAACGGAAATC 59.076 36.000 0.00 0.00 0.00 2.17
431 473 6.156519 GCAATAGTTTTTGGAACGGAAATCT 58.843 36.000 0.00 0.00 0.00 2.40
432 474 6.089417 GCAATAGTTTTTGGAACGGAAATCTG 59.911 38.462 0.00 0.00 0.00 2.90
433 475 3.977427 AGTTTTTGGAACGGAAATCTGC 58.023 40.909 0.00 0.00 0.00 4.26
434 476 3.383185 AGTTTTTGGAACGGAAATCTGCA 59.617 39.130 0.00 0.00 0.00 4.41
435 477 3.363341 TTTTGGAACGGAAATCTGCAC 57.637 42.857 0.00 0.00 0.00 4.57
436 478 2.270352 TTGGAACGGAAATCTGCACT 57.730 45.000 0.00 0.00 0.00 4.40
437 479 1.522668 TGGAACGGAAATCTGCACTG 58.477 50.000 0.00 0.00 0.00 3.66
438 480 1.071542 TGGAACGGAAATCTGCACTGA 59.928 47.619 0.00 0.00 0.00 3.41
439 481 1.464997 GGAACGGAAATCTGCACTGAC 59.535 52.381 0.00 0.00 0.00 3.51
440 482 2.143122 GAACGGAAATCTGCACTGACA 58.857 47.619 0.00 0.00 0.00 3.58
441 483 1.512926 ACGGAAATCTGCACTGACAC 58.487 50.000 0.00 0.00 0.00 3.67
442 484 1.202639 ACGGAAATCTGCACTGACACA 60.203 47.619 0.00 0.00 0.00 3.72
443 485 2.079158 CGGAAATCTGCACTGACACAT 58.921 47.619 0.00 0.00 0.00 3.21
444 486 2.159612 CGGAAATCTGCACTGACACATG 60.160 50.000 0.00 0.00 0.00 3.21
445 487 2.415090 GGAAATCTGCACTGACACATGC 60.415 50.000 0.00 0.73 42.40 4.06
446 488 1.171308 AATCTGCACTGACACATGCC 58.829 50.000 0.00 0.00 41.33 4.40
447 489 0.037160 ATCTGCACTGACACATGCCA 59.963 50.000 0.00 0.00 41.33 4.92
448 490 0.037160 TCTGCACTGACACATGCCAT 59.963 50.000 0.00 0.00 41.33 4.40
449 491 0.170339 CTGCACTGACACATGCCATG 59.830 55.000 2.40 2.40 41.33 3.66
450 492 1.245376 TGCACTGACACATGCCATGG 61.245 55.000 7.63 7.63 41.33 3.66
451 493 1.509463 CACTGACACATGCCATGGC 59.491 57.895 30.54 30.54 42.35 4.40
452 494 1.679977 ACTGACACATGCCATGGCC 60.680 57.895 33.44 17.33 41.09 5.36
453 495 1.679641 CTGACACATGCCATGGCCA 60.680 57.895 33.44 20.93 41.09 5.36
454 496 1.000612 TGACACATGCCATGGCCAT 59.999 52.632 33.44 22.58 41.09 4.40
455 497 1.324005 TGACACATGCCATGGCCATG 61.324 55.000 34.82 34.82 41.09 3.66
456 498 2.108157 CACATGCCATGGCCATGC 59.892 61.111 36.08 29.67 41.09 4.06
457 499 2.042333 ACATGCCATGGCCATGCT 60.042 55.556 36.08 21.27 41.09 3.79
458 500 2.131709 ACATGCCATGGCCATGCTC 61.132 57.895 36.08 28.29 41.09 4.26
459 501 1.832608 CATGCCATGGCCATGCTCT 60.833 57.895 36.08 20.59 41.09 4.09
460 502 1.832608 ATGCCATGGCCATGCTCTG 60.833 57.895 36.08 24.37 41.09 3.35
489 531 7.390718 AGTTAAATTAGTAGTGCCAAAGTGGAG 59.609 37.037 0.00 0.00 40.96 3.86
490 532 2.762535 TAGTAGTGCCAAAGTGGAGC 57.237 50.000 0.00 0.00 40.96 4.70
497 539 1.569479 GCCAAAGTGGAGCTGTCGAC 61.569 60.000 9.11 9.11 40.96 4.20
499 541 0.249868 CAAAGTGGAGCTGTCGACCA 60.250 55.000 14.12 0.00 31.96 4.02
520 562 5.406175 ACCAATCGATGCTCAAATGTTTTTG 59.594 36.000 0.00 0.00 42.98 2.44
577 634 5.748402 TGATCCAGTTTATGCAGAGTCATT 58.252 37.500 0.00 0.00 0.00 2.57
580 637 5.316167 TCCAGTTTATGCAGAGTCATTTGT 58.684 37.500 0.00 0.00 0.00 2.83
583 640 6.312487 CAGTTTATGCAGAGTCATTTGTCTG 58.688 40.000 0.00 0.00 42.72 3.51
586 643 2.771089 TGCAGAGTCATTTGTCTGTCC 58.229 47.619 0.00 0.00 41.99 4.02
592 2158 6.376978 CAGAGTCATTTGTCTGTCCAATTTC 58.623 40.000 0.00 0.00 36.27 2.17
645 2215 5.291178 CAGTGTCATTTTCCAATCAAGCAA 58.709 37.500 0.00 0.00 0.00 3.91
647 2217 5.754890 AGTGTCATTTTCCAATCAAGCAAAC 59.245 36.000 0.00 0.00 0.00 2.93
659 2229 6.869913 CCAATCAAGCAAACAGTGTATGATTT 59.130 34.615 13.78 0.00 40.05 2.17
660 2230 7.148705 CCAATCAAGCAAACAGTGTATGATTTG 60.149 37.037 13.78 8.57 40.05 2.32
662 2232 6.207928 TCAAGCAAACAGTGTATGATTTGTG 58.792 36.000 0.00 0.00 34.81 3.33
663 2233 5.125100 AGCAAACAGTGTATGATTTGTGG 57.875 39.130 0.00 0.00 34.81 4.17
732 2321 4.196193 CGTCCAAGGTTAGCATAAATCCA 58.804 43.478 0.00 0.00 0.00 3.41
778 2383 0.641601 ATCTCCCCTCTTCTCTGCCT 59.358 55.000 0.00 0.00 0.00 4.75
850 4217 2.188817 CCTCCCCTATAAATCCTCCGG 58.811 57.143 0.00 0.00 0.00 5.14
883 4260 1.191489 TCCTCAGATCACAACCCGCA 61.191 55.000 0.00 0.00 0.00 5.69
965 4396 1.754621 CAGAGAGCGGGGCAGAGTA 60.755 63.158 0.00 0.00 0.00 2.59
1101 4552 2.959484 GCAGTGGGAGCAGCAGGTA 61.959 63.158 0.00 0.00 0.00 3.08
1481 4994 8.975663 TTACTGATAATAGGAACGAGAAGAGA 57.024 34.615 0.00 0.00 0.00 3.10
1495 5008 6.459066 ACGAGAAGAGAGATCACAAATTCAA 58.541 36.000 0.00 0.00 0.00 2.69
1503 5016 5.413833 AGAGATCACAAATTCAATGCGAGTT 59.586 36.000 0.00 0.00 0.00 3.01
1541 5358 1.860484 GCACAAGTGAGAAGCTGGGC 61.860 60.000 4.04 0.00 0.00 5.36
1554 5371 3.876589 CTGGGCGCCACTAACACGT 62.877 63.158 30.85 0.00 0.00 4.49
1592 5423 7.548196 TCGTTGACTCTTTTGTACAGAATTT 57.452 32.000 0.00 0.00 0.00 1.82
1606 5437 6.820152 TGTACAGAATTTGGACATCTGATCTG 59.180 38.462 8.84 0.00 45.83 2.90
1607 5438 6.058553 ACAGAATTTGGACATCTGATCTGA 57.941 37.500 4.63 4.63 42.48 3.27
1608 5439 6.660800 ACAGAATTTGGACATCTGATCTGAT 58.339 36.000 9.15 9.15 42.48 2.90
1609 5440 6.766944 ACAGAATTTGGACATCTGATCTGATC 59.233 38.462 11.82 10.72 42.48 2.92
1625 5456 0.473326 GATCCCAGATCAGGCTTGCT 59.527 55.000 0.00 0.00 0.00 3.91
1633 5464 4.583489 CCAGATCAGGCTTGCTATTCAAAT 59.417 41.667 0.00 0.00 33.65 2.32
1635 5466 5.531659 CAGATCAGGCTTGCTATTCAAATCT 59.468 40.000 0.00 0.00 33.65 2.40
1639 5470 6.359804 TCAGGCTTGCTATTCAAATCTACAT 58.640 36.000 0.00 0.00 33.65 2.29
1646 5477 5.887598 TGCTATTCAAATCTACATGTTGCCT 59.112 36.000 2.30 0.00 0.00 4.75
1662 5493 4.142071 TGTTGCCTTGCTATCTCTGTCTAG 60.142 45.833 0.00 0.00 0.00 2.43
1663 5494 3.903467 TGCCTTGCTATCTCTGTCTAGA 58.097 45.455 0.00 0.00 0.00 2.43
1664 5495 4.281657 TGCCTTGCTATCTCTGTCTAGAA 58.718 43.478 0.00 0.00 31.21 2.10
1665 5496 4.340666 TGCCTTGCTATCTCTGTCTAGAAG 59.659 45.833 0.00 0.00 31.21 2.85
1666 5497 4.582656 GCCTTGCTATCTCTGTCTAGAAGA 59.417 45.833 0.00 0.00 31.21 2.87
1735 6019 3.878778 AGACAGACTTGGCATATGGTTC 58.121 45.455 4.56 0.00 33.45 3.62
1743 6044 0.759346 GGCATATGGTTCCCTCTCGT 59.241 55.000 4.56 0.00 0.00 4.18
1752 6053 2.037381 GGTTCCCTCTCGTAATGATCCC 59.963 54.545 0.00 0.00 0.00 3.85
1754 6055 3.260269 TCCCTCTCGTAATGATCCCAT 57.740 47.619 0.00 0.00 33.66 4.00
1766 6067 3.198409 TGATCCCATCATCCAAACTCG 57.802 47.619 0.00 0.00 33.59 4.18
1770 6071 8.929382 ATGATCCCATCATCCAAACTCGATGG 62.929 46.154 9.78 9.78 46.62 3.51
1779 6080 1.806542 CAAACTCGATGGACACCCTTG 59.193 52.381 0.00 0.00 0.00 3.61
1784 6085 1.275291 TCGATGGACACCCTTGAGAAC 59.725 52.381 0.00 0.00 0.00 3.01
1804 6105 2.830321 ACCGGTGGTTAAGAACTAGAGG 59.170 50.000 6.12 0.00 27.29 3.69
1810 6111 4.470304 GTGGTTAAGAACTAGAGGGGTGAT 59.530 45.833 0.00 0.00 0.00 3.06
1884 6219 6.813293 ATTCCCTGGAATTTATGGAAAAGG 57.187 37.500 5.57 0.00 41.55 3.11
1885 6220 5.283876 TCCCTGGAATTTATGGAAAAGGT 57.716 39.130 0.00 0.00 0.00 3.50
1886 6221 5.660533 TCCCTGGAATTTATGGAAAAGGTT 58.339 37.500 0.00 0.00 0.00 3.50
1887 6222 5.483583 TCCCTGGAATTTATGGAAAAGGTTG 59.516 40.000 0.00 0.00 0.00 3.77
1889 6224 6.013812 CCCTGGAATTTATGGAAAAGGTTGAA 60.014 38.462 0.00 0.00 0.00 2.69
1893 6228 7.508977 TGGAATTTATGGAAAAGGTTGAACTCT 59.491 33.333 0.00 0.00 0.00 3.24
1901 6236 2.802787 AGGTTGAACTCTCGTGTCTG 57.197 50.000 0.00 0.00 0.00 3.51
1902 6237 2.307768 AGGTTGAACTCTCGTGTCTGA 58.692 47.619 0.00 0.00 0.00 3.27
1907 6242 2.884639 TGAACTCTCGTGTCTGATCACA 59.115 45.455 0.00 0.00 38.12 3.58
1909 6244 4.021981 TGAACTCTCGTGTCTGATCACAAT 60.022 41.667 0.00 0.00 38.12 2.71
1928 6263 5.189928 ACAATAGGTGTGTTTGACTTGTGA 58.810 37.500 0.00 0.00 39.72 3.58
1929 6264 5.296780 ACAATAGGTGTGTTTGACTTGTGAG 59.703 40.000 0.00 0.00 39.72 3.51
1930 6265 3.350219 AGGTGTGTTTGACTTGTGAGT 57.650 42.857 0.00 0.00 39.32 3.41
1931 6266 3.009723 AGGTGTGTTTGACTTGTGAGTG 58.990 45.455 0.00 0.00 35.88 3.51
1932 6267 2.097466 GGTGTGTTTGACTTGTGAGTGG 59.903 50.000 0.00 0.00 35.88 4.00
1933 6268 2.747446 GTGTGTTTGACTTGTGAGTGGT 59.253 45.455 0.00 0.00 35.88 4.16
1934 6269 3.190535 GTGTGTTTGACTTGTGAGTGGTT 59.809 43.478 0.00 0.00 35.88 3.67
1935 6270 3.190327 TGTGTTTGACTTGTGAGTGGTTG 59.810 43.478 0.00 0.00 35.88 3.77
1936 6271 2.163412 TGTTTGACTTGTGAGTGGTTGC 59.837 45.455 0.00 0.00 35.88 4.17
1937 6272 2.418368 TTGACTTGTGAGTGGTTGCT 57.582 45.000 0.00 0.00 35.88 3.91
1938 6273 2.418368 TGACTTGTGAGTGGTTGCTT 57.582 45.000 0.00 0.00 35.88 3.91
1939 6274 2.722094 TGACTTGTGAGTGGTTGCTTT 58.278 42.857 0.00 0.00 35.88 3.51
1940 6275 3.879998 TGACTTGTGAGTGGTTGCTTTA 58.120 40.909 0.00 0.00 35.88 1.85
1941 6276 4.460263 TGACTTGTGAGTGGTTGCTTTAT 58.540 39.130 0.00 0.00 35.88 1.40
1942 6277 4.515191 TGACTTGTGAGTGGTTGCTTTATC 59.485 41.667 0.00 0.00 35.88 1.75
1943 6278 3.821033 ACTTGTGAGTGGTTGCTTTATCC 59.179 43.478 0.00 0.00 33.99 2.59
1944 6279 3.788227 TGTGAGTGGTTGCTTTATCCT 57.212 42.857 0.00 0.00 0.00 3.24
1945 6280 4.901197 TGTGAGTGGTTGCTTTATCCTA 57.099 40.909 0.00 0.00 0.00 2.94
1946 6281 5.435686 TGTGAGTGGTTGCTTTATCCTAT 57.564 39.130 0.00 0.00 0.00 2.57
1947 6282 6.553953 TGTGAGTGGTTGCTTTATCCTATA 57.446 37.500 0.00 0.00 0.00 1.31
1948 6283 7.136822 TGTGAGTGGTTGCTTTATCCTATAT 57.863 36.000 0.00 0.00 0.00 0.86
1949 6284 8.257602 TGTGAGTGGTTGCTTTATCCTATATA 57.742 34.615 0.00 0.00 0.00 0.86
1950 6285 8.880244 TGTGAGTGGTTGCTTTATCCTATATAT 58.120 33.333 0.00 0.00 0.00 0.86
1951 6286 9.372369 GTGAGTGGTTGCTTTATCCTATATATC 57.628 37.037 0.00 0.00 0.00 1.63
1952 6287 9.100197 TGAGTGGTTGCTTTATCCTATATATCA 57.900 33.333 0.00 0.00 0.00 2.15
1966 6301 9.741198 ATCCTATATATCATTCACAATCCTCCT 57.259 33.333 0.00 0.00 0.00 3.69
1967 6302 9.206690 TCCTATATATCATTCACAATCCTCCTC 57.793 37.037 0.00 0.00 0.00 3.71
1968 6303 8.140628 CCTATATATCATTCACAATCCTCCTCG 58.859 40.741 0.00 0.00 0.00 4.63
1969 6304 7.724490 ATATATCATTCACAATCCTCCTCGA 57.276 36.000 0.00 0.00 0.00 4.04
1970 6305 4.760530 ATCATTCACAATCCTCCTCGAA 57.239 40.909 0.00 0.00 0.00 3.71
1971 6306 4.551702 TCATTCACAATCCTCCTCGAAA 57.448 40.909 0.00 0.00 0.00 3.46
1972 6307 4.253685 TCATTCACAATCCTCCTCGAAAC 58.746 43.478 0.00 0.00 0.00 2.78
1973 6308 3.762407 TTCACAATCCTCCTCGAAACA 57.238 42.857 0.00 0.00 0.00 2.83
1974 6309 3.319137 TCACAATCCTCCTCGAAACAG 57.681 47.619 0.00 0.00 0.00 3.16
1975 6310 2.028112 TCACAATCCTCCTCGAAACAGG 60.028 50.000 0.00 0.00 34.40 4.00
1976 6311 2.028112 CACAATCCTCCTCGAAACAGGA 60.028 50.000 8.68 8.68 40.56 3.86
1980 6315 3.611766 TCCTCCTCGAAACAGGATTTC 57.388 47.619 3.09 0.00 42.02 2.17
1981 6316 2.903784 TCCTCCTCGAAACAGGATTTCA 59.096 45.455 3.09 0.00 42.02 2.69
1982 6317 3.003480 CCTCCTCGAAACAGGATTTCAC 58.997 50.000 0.00 0.00 42.02 3.18
1983 6318 3.003480 CTCCTCGAAACAGGATTTCACC 58.997 50.000 0.79 0.00 42.02 4.02
1984 6319 2.084546 CCTCGAAACAGGATTTCACCC 58.915 52.381 0.79 0.00 35.20 4.61
1985 6320 2.290323 CCTCGAAACAGGATTTCACCCT 60.290 50.000 0.79 0.00 35.20 4.34
1996 6331 7.440523 CAGGATTTCACCCTGCTTTATATAC 57.559 40.000 0.00 0.00 43.93 1.47
1997 6332 6.147821 CAGGATTTCACCCTGCTTTATATACG 59.852 42.308 0.00 0.00 43.93 3.06
1998 6333 5.411669 GGATTTCACCCTGCTTTATATACGG 59.588 44.000 0.00 0.00 0.00 4.02
1999 6334 5.362105 TTTCACCCTGCTTTATATACGGT 57.638 39.130 0.00 0.00 0.00 4.83
2000 6335 6.482898 TTTCACCCTGCTTTATATACGGTA 57.517 37.500 0.00 0.00 0.00 4.02
2001 6336 6.482898 TTCACCCTGCTTTATATACGGTAA 57.517 37.500 0.00 0.00 0.00 2.85
2002 6337 6.092955 TCACCCTGCTTTATATACGGTAAG 57.907 41.667 0.00 0.00 0.00 2.34
2003 6338 5.011329 TCACCCTGCTTTATATACGGTAAGG 59.989 44.000 0.00 0.00 0.00 2.69
2004 6339 4.285260 ACCCTGCTTTATATACGGTAAGGG 59.715 45.833 13.31 13.31 37.68 3.95
2005 6340 4.285260 CCCTGCTTTATATACGGTAAGGGT 59.715 45.833 8.51 0.00 0.00 4.34
2006 6341 5.235516 CCTGCTTTATATACGGTAAGGGTG 58.764 45.833 0.00 0.00 0.00 4.61
2007 6342 5.011329 CCTGCTTTATATACGGTAAGGGTGA 59.989 44.000 0.00 0.00 0.00 4.02
2008 6343 6.092955 TGCTTTATATACGGTAAGGGTGAG 57.907 41.667 0.00 0.00 0.00 3.51
2009 6344 4.928020 GCTTTATATACGGTAAGGGTGAGC 59.072 45.833 0.00 0.00 0.00 4.26
2010 6345 5.510179 GCTTTATATACGGTAAGGGTGAGCA 60.510 44.000 0.00 0.00 0.00 4.26
2011 6346 6.675413 TTTATATACGGTAAGGGTGAGCAT 57.325 37.500 0.00 0.00 0.00 3.79
2012 6347 4.803098 ATATACGGTAAGGGTGAGCATC 57.197 45.455 0.00 0.00 0.00 3.91
2013 6348 2.154567 TACGGTAAGGGTGAGCATCT 57.845 50.000 0.00 0.00 34.92 2.90
2014 6349 1.276622 ACGGTAAGGGTGAGCATCTT 58.723 50.000 0.00 0.00 34.92 2.40
2015 6350 1.066143 ACGGTAAGGGTGAGCATCTTG 60.066 52.381 0.00 0.00 34.92 3.02
2016 6351 1.066143 CGGTAAGGGTGAGCATCTTGT 60.066 52.381 0.00 0.00 34.92 3.16
2017 6352 2.167693 CGGTAAGGGTGAGCATCTTGTA 59.832 50.000 0.00 0.00 34.92 2.41
2018 6353 3.532542 GGTAAGGGTGAGCATCTTGTAC 58.467 50.000 0.00 0.00 34.92 2.90
2019 6354 3.055385 GGTAAGGGTGAGCATCTTGTACA 60.055 47.826 0.00 0.00 34.92 2.90
2020 6355 4.384208 GGTAAGGGTGAGCATCTTGTACAT 60.384 45.833 0.00 0.00 34.92 2.29
2021 6356 3.550437 AGGGTGAGCATCTTGTACATC 57.450 47.619 0.00 0.00 34.92 3.06
2022 6357 2.159043 AGGGTGAGCATCTTGTACATCG 60.159 50.000 0.00 0.00 34.92 3.84
2023 6358 2.418746 GGGTGAGCATCTTGTACATCGT 60.419 50.000 0.00 0.00 34.92 3.73
2024 6359 2.860735 GGTGAGCATCTTGTACATCGTC 59.139 50.000 0.00 0.00 34.92 4.20
2025 6360 3.429547 GGTGAGCATCTTGTACATCGTCT 60.430 47.826 0.00 0.00 34.92 4.18
2026 6361 4.177026 GTGAGCATCTTGTACATCGTCTT 58.823 43.478 0.00 0.00 34.92 3.01
2027 6362 4.032217 GTGAGCATCTTGTACATCGTCTTG 59.968 45.833 0.00 0.00 34.92 3.02
2028 6363 2.932614 AGCATCTTGTACATCGTCTTGC 59.067 45.455 0.00 1.26 0.00 4.01
2029 6364 2.932614 GCATCTTGTACATCGTCTTGCT 59.067 45.455 0.00 0.00 0.00 3.91
2030 6365 4.112634 GCATCTTGTACATCGTCTTGCTA 58.887 43.478 0.00 0.00 0.00 3.49
2031 6366 4.026475 GCATCTTGTACATCGTCTTGCTAC 60.026 45.833 0.00 0.00 0.00 3.58
2032 6367 4.106029 TCTTGTACATCGTCTTGCTACC 57.894 45.455 0.00 0.00 0.00 3.18
2033 6368 3.762288 TCTTGTACATCGTCTTGCTACCT 59.238 43.478 0.00 0.00 0.00 3.08
2039 6374 4.938080 ACATCGTCTTGCTACCTTCTATG 58.062 43.478 0.00 0.00 0.00 2.23
2080 6415 5.968528 TTGGCGTACTCCAAAATATGTTT 57.031 34.783 14.90 0.00 42.69 2.83
2081 6416 5.303747 TGGCGTACTCCAAAATATGTTTG 57.696 39.130 0.99 0.00 32.18 2.93
2082 6417 4.762765 TGGCGTACTCCAAAATATGTTTGT 59.237 37.500 0.99 0.00 32.18 2.83
2083 6418 5.106475 TGGCGTACTCCAAAATATGTTTGTC 60.106 40.000 0.99 0.00 32.18 3.18
2084 6419 5.019498 GCGTACTCCAAAATATGTTTGTCG 58.981 41.667 0.00 0.00 0.00 4.35
2085 6420 5.019498 CGTACTCCAAAATATGTTTGTCGC 58.981 41.667 0.00 0.00 0.00 5.19
2086 6421 4.078363 ACTCCAAAATATGTTTGTCGCG 57.922 40.909 0.00 0.00 0.00 5.87
2087 6422 3.119990 ACTCCAAAATATGTTTGTCGCGG 60.120 43.478 6.13 0.00 0.00 6.46
2088 6423 3.075148 TCCAAAATATGTTTGTCGCGGA 58.925 40.909 6.13 0.00 0.00 5.54
2089 6424 3.502595 TCCAAAATATGTTTGTCGCGGAA 59.497 39.130 6.13 0.00 0.00 4.30
2090 6425 4.023107 TCCAAAATATGTTTGTCGCGGAAA 60.023 37.500 6.13 2.85 0.00 3.13
2092 6427 3.757745 AATATGTTTGTCGCGGAAAGG 57.242 42.857 6.13 0.00 0.00 3.11
2093 6428 2.172851 TATGTTTGTCGCGGAAAGGT 57.827 45.000 6.13 0.60 0.00 3.50
2094 6429 0.872388 ATGTTTGTCGCGGAAAGGTC 59.128 50.000 6.13 0.00 0.00 3.85
2095 6430 0.179067 TGTTTGTCGCGGAAAGGTCT 60.179 50.000 6.13 0.00 0.00 3.85
2096 6431 0.511653 GTTTGTCGCGGAAAGGTCTC 59.488 55.000 6.13 0.00 0.00 3.36
2097 6432 0.601841 TTTGTCGCGGAAAGGTCTCC 60.602 55.000 6.13 0.00 0.00 3.71
2098 6433 1.750341 TTGTCGCGGAAAGGTCTCCA 61.750 55.000 6.13 0.00 34.91 3.86
2108 6443 4.373771 GGTCTCCACCGGTTGTTC 57.626 61.111 2.97 0.00 31.06 3.18
2109 6444 1.752833 GGTCTCCACCGGTTGTTCT 59.247 57.895 2.97 0.00 31.06 3.01
2112 6447 1.966451 CTCCACCGGTTGTTCTGGC 60.966 63.158 2.97 0.00 46.11 4.85
2114 6449 2.260869 CCACCGGTTGTTCTGGCAG 61.261 63.158 2.97 8.58 46.11 4.85
2115 6450 2.594592 ACCGGTTGTTCTGGCAGC 60.595 61.111 10.34 0.00 46.11 5.25
2116 6451 2.281761 CCGGTTGTTCTGGCAGCT 60.282 61.111 10.34 0.00 35.61 4.24
2117 6452 1.898574 CCGGTTGTTCTGGCAGCTT 60.899 57.895 10.34 0.00 35.61 3.74
2119 6454 1.447317 CGGTTGTTCTGGCAGCTTGT 61.447 55.000 10.34 0.00 0.00 3.16
2120 6455 1.604604 GGTTGTTCTGGCAGCTTGTA 58.395 50.000 10.34 0.00 0.00 2.41
2121 6456 1.266989 GGTTGTTCTGGCAGCTTGTAC 59.733 52.381 10.34 4.01 0.00 2.90
2123 6458 2.618709 GTTGTTCTGGCAGCTTGTACTT 59.381 45.455 10.34 0.00 0.00 2.24
2125 6460 3.287222 TGTTCTGGCAGCTTGTACTTTT 58.713 40.909 10.34 0.00 0.00 2.27
2126 6461 3.066621 TGTTCTGGCAGCTTGTACTTTTG 59.933 43.478 10.34 0.00 0.00 2.44
2127 6462 3.207265 TCTGGCAGCTTGTACTTTTGA 57.793 42.857 10.34 0.00 0.00 2.69
2128 6463 3.754965 TCTGGCAGCTTGTACTTTTGAT 58.245 40.909 10.34 0.00 0.00 2.57
2130 6465 3.754965 TGGCAGCTTGTACTTTTGATCT 58.245 40.909 0.00 0.00 0.00 2.75
2131 6466 3.753272 TGGCAGCTTGTACTTTTGATCTC 59.247 43.478 0.00 0.00 0.00 2.75
2132 6467 3.127721 GGCAGCTTGTACTTTTGATCTCC 59.872 47.826 0.00 0.00 0.00 3.71
2134 6469 4.216257 GCAGCTTGTACTTTTGATCTCCAA 59.784 41.667 0.00 0.00 0.00 3.53
2135 6470 5.105997 GCAGCTTGTACTTTTGATCTCCAAT 60.106 40.000 0.00 0.00 34.23 3.16
2136 6471 6.571150 GCAGCTTGTACTTTTGATCTCCAATT 60.571 38.462 0.00 0.00 34.23 2.32
2137 6472 7.025963 CAGCTTGTACTTTTGATCTCCAATTC 58.974 38.462 0.00 0.00 34.23 2.17
2138 6473 6.944862 AGCTTGTACTTTTGATCTCCAATTCT 59.055 34.615 0.00 0.00 34.23 2.40
2139 6474 7.120432 AGCTTGTACTTTTGATCTCCAATTCTC 59.880 37.037 0.00 0.00 34.23 2.87
2140 6475 7.627300 GCTTGTACTTTTGATCTCCAATTCTCC 60.627 40.741 0.00 0.00 34.23 3.71
2141 6476 6.778821 TGTACTTTTGATCTCCAATTCTCCA 58.221 36.000 0.00 0.00 34.23 3.86
2142 6477 7.405292 TGTACTTTTGATCTCCAATTCTCCAT 58.595 34.615 0.00 0.00 34.23 3.41
2144 6479 6.487828 ACTTTTGATCTCCAATTCTCCATGA 58.512 36.000 0.00 0.00 34.23 3.07
2145 6480 7.124052 ACTTTTGATCTCCAATTCTCCATGAT 58.876 34.615 0.00 0.00 34.23 2.45
2146 6481 8.277197 ACTTTTGATCTCCAATTCTCCATGATA 58.723 33.333 0.00 0.00 34.23 2.15
2148 6483 8.631480 TTTGATCTCCAATTCTCCATGATATG 57.369 34.615 0.00 0.00 34.23 1.78
2149 6484 7.563724 TGATCTCCAATTCTCCATGATATGA 57.436 36.000 0.00 0.00 0.00 2.15
2151 6486 8.612145 TGATCTCCAATTCTCCATGATATGAAT 58.388 33.333 0.00 0.00 0.00 2.57
2152 6487 9.111613 GATCTCCAATTCTCCATGATATGAATC 57.888 37.037 0.00 0.00 0.00 2.52
2153 6488 7.101700 TCTCCAATTCTCCATGATATGAATCG 58.898 38.462 0.00 0.00 34.60 3.34
2154 6489 6.772605 TCCAATTCTCCATGATATGAATCGT 58.227 36.000 0.00 0.00 34.60 3.73
2155 6490 7.226441 TCCAATTCTCCATGATATGAATCGTT 58.774 34.615 0.00 0.00 34.60 3.85
2156 6491 7.720957 TCCAATTCTCCATGATATGAATCGTTT 59.279 33.333 0.00 0.00 34.60 3.60
2157 6492 9.002600 CCAATTCTCCATGATATGAATCGTTTA 57.997 33.333 0.00 0.00 34.60 2.01
2158 6493 9.817365 CAATTCTCCATGATATGAATCGTTTAC 57.183 33.333 0.00 0.00 34.60 2.01
2159 6494 7.637709 TTCTCCATGATATGAATCGTTTACG 57.362 36.000 0.00 0.00 41.45 3.18
2176 6511 6.172966 GTTTACGAACGTACGGTATGTATG 57.827 41.667 21.06 10.85 44.23 2.39
2186 6521 7.141651 CGTACGGTATGTATGTTTAGTCAAC 57.858 40.000 7.57 0.00 35.68 3.18
2204 6539 3.817709 AACATGGTTTGTTGAGGGTTG 57.182 42.857 0.00 0.00 46.80 3.77
2205 6540 2.038659 ACATGGTTTGTTGAGGGTTGG 58.961 47.619 0.00 0.00 33.74 3.77
2208 6543 0.666374 GGTTTGTTGAGGGTTGGACG 59.334 55.000 0.00 0.00 0.00 4.79
2209 6544 0.666374 GTTTGTTGAGGGTTGGACGG 59.334 55.000 0.00 0.00 0.00 4.79
2210 6545 0.256464 TTTGTTGAGGGTTGGACGGT 59.744 50.000 0.00 0.00 0.00 4.83
2212 6547 1.599797 GTTGAGGGTTGGACGGTGG 60.600 63.158 0.00 0.00 0.00 4.61
2213 6548 3.485346 TTGAGGGTTGGACGGTGGC 62.485 63.158 0.00 0.00 0.00 5.01
2216 6551 4.360405 GGGTTGGACGGTGGCCAT 62.360 66.667 9.72 0.00 34.90 4.40
2217 6552 3.061848 GGTTGGACGGTGGCCATG 61.062 66.667 9.72 7.70 34.90 3.66
2218 6553 3.061848 GTTGGACGGTGGCCATGG 61.062 66.667 9.72 7.63 34.90 3.66
2219 6554 4.358841 TTGGACGGTGGCCATGGG 62.359 66.667 9.72 3.54 34.90 4.00
2222 6557 4.041762 GACGGTGGCCATGGGGAA 62.042 66.667 9.72 0.00 35.59 3.97
2223 6558 4.360405 ACGGTGGCCATGGGGAAC 62.360 66.667 9.72 0.00 35.59 3.62
2224 6559 4.358841 CGGTGGCCATGGGGAACA 62.359 66.667 9.72 0.00 35.59 3.18
2226 6561 2.440599 GTGGCCATGGGGAACACT 59.559 61.111 9.72 0.00 39.26 3.55
2228 6563 1.228831 TGGCCATGGGGAACACTTG 60.229 57.895 15.13 0.00 35.59 3.16
2229 6564 1.984026 GGCCATGGGGAACACTTGG 60.984 63.158 15.13 0.00 36.52 3.61
2230 6565 1.228862 GCCATGGGGAACACTTGGT 60.229 57.895 15.13 0.00 36.02 3.67
2231 6566 0.039035 GCCATGGGGAACACTTGGTA 59.961 55.000 15.13 0.00 36.02 3.25
2232 6567 1.834188 CCATGGGGAACACTTGGTAC 58.166 55.000 2.85 0.00 35.59 3.34
2233 6568 1.448985 CATGGGGAACACTTGGTACG 58.551 55.000 0.00 0.00 0.00 3.67
2234 6569 1.061546 ATGGGGAACACTTGGTACGT 58.938 50.000 0.00 0.00 0.00 3.57
2235 6570 0.107081 TGGGGAACACTTGGTACGTG 59.893 55.000 0.00 0.00 38.32 4.49
2236 6571 0.107268 GGGGAACACTTGGTACGTGT 59.893 55.000 0.00 0.00 46.77 4.49
2237 6572 1.223187 GGGAACACTTGGTACGTGTG 58.777 55.000 0.00 0.00 44.25 3.82
2238 6573 1.473788 GGGAACACTTGGTACGTGTGT 60.474 52.381 0.00 0.00 44.25 3.72
2239 6574 1.862827 GGAACACTTGGTACGTGTGTC 59.137 52.381 8.81 9.98 44.25 3.67
2240 6575 2.482490 GGAACACTTGGTACGTGTGTCT 60.482 50.000 8.81 1.13 44.25 3.41
2241 6576 3.243501 GGAACACTTGGTACGTGTGTCTA 60.244 47.826 8.81 0.00 44.25 2.59
2242 6577 4.362279 GAACACTTGGTACGTGTGTCTAA 58.638 43.478 8.81 0.00 44.25 2.10
2243 6578 4.595762 ACACTTGGTACGTGTGTCTAAT 57.404 40.909 0.00 0.00 41.85 1.73
2244 6579 4.952460 ACACTTGGTACGTGTGTCTAATT 58.048 39.130 0.00 0.00 41.85 1.40
2245 6580 4.986659 ACACTTGGTACGTGTGTCTAATTC 59.013 41.667 0.00 0.00 41.85 2.17
2246 6581 4.986034 CACTTGGTACGTGTGTCTAATTCA 59.014 41.667 0.00 0.00 31.50 2.57
2247 6582 5.464057 CACTTGGTACGTGTGTCTAATTCAA 59.536 40.000 0.00 0.00 31.50 2.69
2249 6584 6.539464 ACTTGGTACGTGTGTCTAATTCAAAA 59.461 34.615 0.00 0.00 0.00 2.44
2252 6587 6.422701 TGGTACGTGTGTCTAATTCAAAAGAG 59.577 38.462 0.00 0.00 0.00 2.85
2253 6588 6.423001 GGTACGTGTGTCTAATTCAAAAGAGT 59.577 38.462 0.00 0.00 0.00 3.24
2254 6589 6.920569 ACGTGTGTCTAATTCAAAAGAGTT 57.079 33.333 0.00 0.00 0.00 3.01
2255 6590 6.945072 ACGTGTGTCTAATTCAAAAGAGTTC 58.055 36.000 0.00 0.00 0.00 3.01
2256 6591 6.018180 ACGTGTGTCTAATTCAAAAGAGTTCC 60.018 38.462 0.00 0.00 0.00 3.62
2259 6594 7.013369 GTGTGTCTAATTCAAAAGAGTTCCCTT 59.987 37.037 0.00 0.00 0.00 3.95
2260 6595 7.559897 TGTGTCTAATTCAAAAGAGTTCCCTTT 59.440 33.333 0.00 0.00 37.94 3.11
2261 6596 8.414003 GTGTCTAATTCAAAAGAGTTCCCTTTT 58.586 33.333 0.00 0.00 44.51 2.27
2262 6597 8.977412 TGTCTAATTCAAAAGAGTTCCCTTTTT 58.023 29.630 0.00 0.00 42.53 1.94
2282 6617 1.444836 TTTTCATACGCCTTCCACCG 58.555 50.000 0.00 0.00 0.00 4.94
2283 6618 0.322322 TTTCATACGCCTTCCACCGT 59.678 50.000 0.00 0.00 41.11 4.83
2284 6619 0.390603 TTCATACGCCTTCCACCGTG 60.391 55.000 0.00 0.00 38.28 4.94
2286 6621 1.985662 ATACGCCTTCCACCGTGGA 60.986 57.895 16.73 16.73 46.61 4.02
2297 6632 3.053896 CCGTGGAAGCCGGGTTTC 61.054 66.667 21.73 19.89 41.78 2.78
2298 6633 2.281208 CGTGGAAGCCGGGTTTCA 60.281 61.111 23.52 23.52 0.00 2.69
2299 6634 1.674322 CGTGGAAGCCGGGTTTCAT 60.674 57.895 29.18 2.28 0.00 2.57
2300 6635 1.241315 CGTGGAAGCCGGGTTTCATT 61.241 55.000 29.18 1.82 0.00 2.57
2301 6636 1.828979 GTGGAAGCCGGGTTTCATTA 58.171 50.000 29.18 4.76 0.00 1.90
2302 6637 1.471287 GTGGAAGCCGGGTTTCATTAC 59.529 52.381 29.18 13.82 0.00 1.89
2303 6638 1.353022 TGGAAGCCGGGTTTCATTACT 59.647 47.619 23.52 0.00 0.00 2.24
2309 6644 2.485038 GCCGGGTTTCATTACTTTTCGA 59.515 45.455 2.18 0.00 0.00 3.71
2310 6645 3.425758 GCCGGGTTTCATTACTTTTCGAG 60.426 47.826 2.18 0.00 0.00 4.04
2312 6647 4.453136 CCGGGTTTCATTACTTTTCGAGAA 59.547 41.667 0.00 0.00 0.00 2.87
2313 6648 5.049267 CCGGGTTTCATTACTTTTCGAGAAA 60.049 40.000 0.00 0.00 0.00 2.52
2314 6649 5.849604 CGGGTTTCATTACTTTTCGAGAAAC 59.150 40.000 11.92 11.92 42.27 2.78
2316 6651 6.635641 GGGTTTCATTACTTTTCGAGAAACAC 59.364 38.462 18.45 13.90 43.83 3.32
2317 6652 7.415229 GGTTTCATTACTTTTCGAGAAACACT 58.585 34.615 18.45 0.00 43.83 3.55
2318 6653 7.913821 GGTTTCATTACTTTTCGAGAAACACTT 59.086 33.333 18.45 0.00 43.83 3.16
2319 6654 8.734030 GTTTCATTACTTTTCGAGAAACACTTG 58.266 33.333 14.26 0.53 42.45 3.16
2320 6655 7.548196 TCATTACTTTTCGAGAAACACTTGT 57.452 32.000 0.00 0.00 0.00 3.16
2321 6656 7.406553 TCATTACTTTTCGAGAAACACTTGTG 58.593 34.615 0.00 0.00 0.00 3.33
2322 6657 6.971527 TTACTTTTCGAGAAACACTTGTGA 57.028 33.333 7.83 0.00 0.00 3.58
2324 6659 5.628134 ACTTTTCGAGAAACACTTGTGAAC 58.372 37.500 7.83 0.00 0.00 3.18
2325 6660 5.180492 ACTTTTCGAGAAACACTTGTGAACA 59.820 36.000 7.83 0.00 0.00 3.18
2326 6661 4.593597 TTCGAGAAACACTTGTGAACAC 57.406 40.909 7.83 0.00 0.00 3.32
2328 6663 3.369756 TCGAGAAACACTTGTGAACACAC 59.630 43.478 7.16 0.00 41.67 3.82
2329 6664 3.485216 CGAGAAACACTTGTGAACACACC 60.485 47.826 7.16 0.00 41.67 4.16
2330 6665 3.417101 AGAAACACTTGTGAACACACCA 58.583 40.909 7.16 0.00 41.67 4.17
2331 6666 3.823873 AGAAACACTTGTGAACACACCAA 59.176 39.130 7.16 0.00 41.67 3.67
2332 6667 3.569250 AACACTTGTGAACACACCAAC 57.431 42.857 7.16 0.00 41.67 3.77
2333 6668 2.790433 ACACTTGTGAACACACCAACT 58.210 42.857 7.16 0.00 41.67 3.16
2334 6669 3.945346 ACACTTGTGAACACACCAACTA 58.055 40.909 7.16 0.00 41.67 2.24
2335 6670 4.328536 ACACTTGTGAACACACCAACTAA 58.671 39.130 7.16 0.00 41.67 2.24
2336 6671 4.947388 ACACTTGTGAACACACCAACTAAT 59.053 37.500 7.16 0.00 41.67 1.73
2338 6673 4.272504 ACTTGTGAACACACCAACTAATCG 59.727 41.667 7.16 0.00 41.67 3.34
2339 6674 2.546368 TGTGAACACACCAACTAATCGC 59.454 45.455 3.39 0.00 36.21 4.58
2340 6675 2.806244 GTGAACACACCAACTAATCGCT 59.194 45.455 0.00 0.00 0.00 4.93
2343 6678 1.071699 ACACACCAACTAATCGCTGGT 59.928 47.619 0.00 0.00 42.76 4.00
2345 6680 2.854522 ACCAACTAATCGCTGGTGC 58.145 52.632 0.00 0.00 40.52 5.01
2346 6681 0.036164 ACCAACTAATCGCTGGTGCA 59.964 50.000 0.00 0.00 40.52 4.57
2347 6682 1.340017 ACCAACTAATCGCTGGTGCAT 60.340 47.619 0.00 0.00 40.52 3.96
2351 6686 1.739466 ACTAATCGCTGGTGCATGTTG 59.261 47.619 0.00 0.00 39.64 3.33
2352 6687 1.064505 CTAATCGCTGGTGCATGTTGG 59.935 52.381 0.00 0.00 39.64 3.77
2353 6688 2.216750 AATCGCTGGTGCATGTTGGC 62.217 55.000 0.00 0.00 39.64 4.52
2354 6689 4.424566 CGCTGGTGCATGTTGGCC 62.425 66.667 0.00 0.00 39.64 5.36
2355 6690 4.424566 GCTGGTGCATGTTGGCCG 62.425 66.667 0.00 0.00 39.41 6.13
2356 6691 4.424566 CTGGTGCATGTTGGCCGC 62.425 66.667 0.00 0.00 0.00 6.53
2359 6694 4.120331 GTGCATGTTGGCCGCCTC 62.120 66.667 11.61 4.64 0.00 4.70
2363 6698 3.650950 ATGTTGGCCGCCTCCACT 61.651 61.111 11.61 0.00 35.50 4.00
2364 6699 2.297895 ATGTTGGCCGCCTCCACTA 61.298 57.895 11.61 0.00 35.50 2.74
2365 6700 2.436115 GTTGGCCGCCTCCACTAC 60.436 66.667 11.61 0.00 35.50 2.73
2366 6701 3.712907 TTGGCCGCCTCCACTACC 61.713 66.667 11.61 0.00 35.50 3.18
2369 6704 4.509737 GCCGCCTCCACTACCGTC 62.510 72.222 0.00 0.00 0.00 4.79
2370 6705 3.834799 CCGCCTCCACTACCGTCC 61.835 72.222 0.00 0.00 0.00 4.79
2371 6706 2.754658 CGCCTCCACTACCGTCCT 60.755 66.667 0.00 0.00 0.00 3.85
2373 6708 0.822532 CGCCTCCACTACCGTCCTAT 60.823 60.000 0.00 0.00 0.00 2.57
2374 6709 0.960286 GCCTCCACTACCGTCCTATC 59.040 60.000 0.00 0.00 0.00 2.08
2375 6710 1.753141 GCCTCCACTACCGTCCTATCA 60.753 57.143 0.00 0.00 0.00 2.15
2376 6711 2.231529 CCTCCACTACCGTCCTATCAG 58.768 57.143 0.00 0.00 0.00 2.90
2377 6712 2.423088 CCTCCACTACCGTCCTATCAGT 60.423 54.545 0.00 0.00 0.00 3.41
2378 6713 2.879646 CTCCACTACCGTCCTATCAGTC 59.120 54.545 0.00 0.00 0.00 3.51
2379 6714 2.508716 TCCACTACCGTCCTATCAGTCT 59.491 50.000 0.00 0.00 0.00 3.24
2381 6716 3.700038 CCACTACCGTCCTATCAGTCTTT 59.300 47.826 0.00 0.00 0.00 2.52
2382 6717 4.885907 CCACTACCGTCCTATCAGTCTTTA 59.114 45.833 0.00 0.00 0.00 1.85
2384 6719 6.040616 CCACTACCGTCCTATCAGTCTTTAAT 59.959 42.308 0.00 0.00 0.00 1.40
2385 6720 7.417570 CCACTACCGTCCTATCAGTCTTTAATT 60.418 40.741 0.00 0.00 0.00 1.40
2386 6721 7.980099 CACTACCGTCCTATCAGTCTTTAATTT 59.020 37.037 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.514592 CCAGTACAGCATGCCCCG 60.515 66.667 15.66 5.90 42.53 5.73
1 2 2.830370 GCCAGTACAGCATGCCCC 60.830 66.667 15.66 0.00 42.53 5.80
2 3 2.830370 GGCCAGTACAGCATGCCC 60.830 66.667 15.66 1.27 42.53 5.36
3 4 3.204827 CGGCCAGTACAGCATGCC 61.205 66.667 15.66 0.00 42.53 4.40
4 5 2.436646 ACGGCCAGTACAGCATGC 60.437 61.111 10.51 10.51 42.53 4.06
5 6 1.079197 TCACGGCCAGTACAGCATG 60.079 57.895 2.24 7.42 46.00 4.06
6 7 1.079127 GTCACGGCCAGTACAGCAT 60.079 57.895 2.24 0.00 0.00 3.79
7 8 1.826340 ATGTCACGGCCAGTACAGCA 61.826 55.000 2.24 0.10 0.00 4.41
8 9 0.174845 TATGTCACGGCCAGTACAGC 59.825 55.000 2.24 0.00 0.00 4.40
9 10 2.665649 TTATGTCACGGCCAGTACAG 57.334 50.000 2.24 0.00 0.00 2.74
10 11 2.498078 TCATTATGTCACGGCCAGTACA 59.502 45.455 2.24 3.16 0.00 2.90
11 12 2.864343 GTCATTATGTCACGGCCAGTAC 59.136 50.000 2.24 0.00 0.00 2.73
12 13 2.764010 AGTCATTATGTCACGGCCAGTA 59.236 45.455 2.24 0.00 0.00 2.74
13 14 1.555075 AGTCATTATGTCACGGCCAGT 59.445 47.619 2.24 0.00 0.00 4.00
14 15 2.315925 AGTCATTATGTCACGGCCAG 57.684 50.000 2.24 0.00 0.00 4.85
15 16 2.159014 GGTAGTCATTATGTCACGGCCA 60.159 50.000 2.24 0.00 0.00 5.36
16 17 2.159014 TGGTAGTCATTATGTCACGGCC 60.159 50.000 0.00 0.00 0.00 6.13
17 18 3.173668 TGGTAGTCATTATGTCACGGC 57.826 47.619 0.00 0.00 0.00 5.68
18 19 5.234329 GTCAATGGTAGTCATTATGTCACGG 59.766 44.000 0.00 0.00 43.70 4.94
19 20 5.234329 GGTCAATGGTAGTCATTATGTCACG 59.766 44.000 0.00 0.00 43.70 4.35
20 21 5.234329 CGGTCAATGGTAGTCATTATGTCAC 59.766 44.000 0.00 0.00 43.70 3.67
21 22 5.105106 ACGGTCAATGGTAGTCATTATGTCA 60.105 40.000 0.00 0.00 43.70 3.58
22 23 5.357257 ACGGTCAATGGTAGTCATTATGTC 58.643 41.667 0.00 0.00 43.70 3.06
23 24 5.353394 ACGGTCAATGGTAGTCATTATGT 57.647 39.130 0.00 0.00 43.70 2.29
24 25 4.444388 CGACGGTCAATGGTAGTCATTATG 59.556 45.833 9.10 0.00 43.70 1.90
25 26 4.098960 ACGACGGTCAATGGTAGTCATTAT 59.901 41.667 9.10 0.00 43.70 1.28
26 27 3.444742 ACGACGGTCAATGGTAGTCATTA 59.555 43.478 9.10 0.00 43.70 1.90
27 28 2.232941 ACGACGGTCAATGGTAGTCATT 59.767 45.455 9.10 0.00 46.24 2.57
28 29 1.822990 ACGACGGTCAATGGTAGTCAT 59.177 47.619 9.10 0.00 37.79 3.06
29 30 1.250328 ACGACGGTCAATGGTAGTCA 58.750 50.000 9.10 0.00 32.57 3.41
30 31 1.990563 CAACGACGGTCAATGGTAGTC 59.009 52.381 9.10 0.00 0.00 2.59
31 32 1.342174 ACAACGACGGTCAATGGTAGT 59.658 47.619 9.10 0.00 0.00 2.73
32 33 2.074547 ACAACGACGGTCAATGGTAG 57.925 50.000 9.10 0.00 0.00 3.18
33 34 2.529780 AACAACGACGGTCAATGGTA 57.470 45.000 9.10 0.00 0.00 3.25
34 35 2.409975 CTAACAACGACGGTCAATGGT 58.590 47.619 9.10 7.38 0.00 3.55
35 36 1.127951 GCTAACAACGACGGTCAATGG 59.872 52.381 9.10 0.00 0.00 3.16
36 37 1.795872 TGCTAACAACGACGGTCAATG 59.204 47.619 9.10 8.58 0.00 2.82
37 38 2.066262 CTGCTAACAACGACGGTCAAT 58.934 47.619 9.10 0.00 0.00 2.57
38 39 1.493772 CTGCTAACAACGACGGTCAA 58.506 50.000 9.10 0.00 0.00 3.18
39 40 0.319211 CCTGCTAACAACGACGGTCA 60.319 55.000 9.10 0.00 0.00 4.02
40 41 0.038892 TCCTGCTAACAACGACGGTC 60.039 55.000 0.00 0.00 0.00 4.79
41 42 0.038526 CTCCTGCTAACAACGACGGT 60.039 55.000 0.00 0.00 0.00 4.83
42 43 0.038526 ACTCCTGCTAACAACGACGG 60.039 55.000 0.00 0.00 0.00 4.79
43 44 2.624316 TACTCCTGCTAACAACGACG 57.376 50.000 0.00 0.00 0.00 5.12
44 45 4.033684 CGTATACTCCTGCTAACAACGAC 58.966 47.826 0.56 0.00 0.00 4.34
45 46 3.691118 ACGTATACTCCTGCTAACAACGA 59.309 43.478 0.56 0.00 0.00 3.85
46 47 4.025015 ACGTATACTCCTGCTAACAACG 57.975 45.455 0.56 0.00 0.00 4.10
72 73 9.263538 CCCGTTGTGCTGTTAATTAACTATATA 57.736 33.333 24.81 7.37 37.12 0.86
73 74 7.988599 TCCCGTTGTGCTGTTAATTAACTATAT 59.011 33.333 24.81 0.00 37.12 0.86
74 75 7.278424 GTCCCGTTGTGCTGTTAATTAACTATA 59.722 37.037 24.81 11.04 37.12 1.31
80 81 2.737783 CGTCCCGTTGTGCTGTTAATTA 59.262 45.455 0.00 0.00 0.00 1.40
86 87 4.539083 TGCGTCCCGTTGTGCTGT 62.539 61.111 0.00 0.00 0.00 4.40
87 88 3.716006 CTGCGTCCCGTTGTGCTG 61.716 66.667 0.00 0.00 0.00 4.41
187 206 3.482722 TTGAGCGGTAGTAGAACGAAG 57.517 47.619 0.00 0.00 0.00 3.79
202 221 6.992063 TGGAACAGAGATTTAGATTTGAGC 57.008 37.500 0.00 0.00 0.00 4.26
231 260 0.387367 CGTGCGTGCTGAAGTAGTCT 60.387 55.000 0.00 0.00 0.00 3.24
237 266 0.519175 GTAATGCGTGCGTGCTGAAG 60.519 55.000 1.52 0.00 35.36 3.02
329 358 1.602920 CGGCAGGCTTTGACCTTTTTC 60.603 52.381 0.00 0.00 38.26 2.29
334 363 2.348998 CTCGGCAGGCTTTGACCT 59.651 61.111 0.00 0.00 42.30 3.85
335 364 3.435186 GCTCGGCAGGCTTTGACC 61.435 66.667 0.00 0.00 0.00 4.02
336 365 1.795170 TTTGCTCGGCAGGCTTTGAC 61.795 55.000 0.00 0.00 40.61 3.18
337 366 1.528076 TTTGCTCGGCAGGCTTTGA 60.528 52.632 0.00 0.00 40.61 2.69
338 367 1.372128 GTTTGCTCGGCAGGCTTTG 60.372 57.895 0.00 0.00 40.61 2.77
340 369 3.357079 CGTTTGCTCGGCAGGCTT 61.357 61.111 0.00 0.00 40.61 4.35
348 383 1.459592 CCTCTTGTAACCGTTTGCTCG 59.540 52.381 0.00 0.00 0.00 5.03
366 408 1.132262 CGTTGGTGCGCATTTTATCCT 59.868 47.619 15.91 0.00 0.00 3.24
367 409 1.544686 CGTTGGTGCGCATTTTATCC 58.455 50.000 15.91 9.82 0.00 2.59
370 412 1.581954 CCCGTTGGTGCGCATTTTA 59.418 52.632 15.91 0.00 0.00 1.52
371 413 2.338257 CCCGTTGGTGCGCATTTT 59.662 55.556 15.91 0.00 0.00 1.82
389 431 1.441311 CATATTTTGCGGGGCCACC 59.559 57.895 4.39 1.95 0.00 4.61
390 432 1.227234 GCATATTTTGCGGGGCCAC 60.227 57.895 4.39 0.00 42.54 5.01
391 433 3.215245 GCATATTTTGCGGGGCCA 58.785 55.556 4.39 0.00 42.54 5.36
399 441 8.167985 CCGTTCCAAAAACTATTGCATATTTTG 58.832 33.333 12.29 12.29 39.48 2.44
400 442 8.091449 TCCGTTCCAAAAACTATTGCATATTTT 58.909 29.630 0.00 0.00 0.00 1.82
401 443 7.607250 TCCGTTCCAAAAACTATTGCATATTT 58.393 30.769 0.00 0.00 0.00 1.40
402 444 7.164230 TCCGTTCCAAAAACTATTGCATATT 57.836 32.000 0.00 0.00 0.00 1.28
403 445 6.767524 TCCGTTCCAAAAACTATTGCATAT 57.232 33.333 0.00 0.00 0.00 1.78
404 446 6.576662 TTCCGTTCCAAAAACTATTGCATA 57.423 33.333 0.00 0.00 0.00 3.14
405 447 5.461032 TTCCGTTCCAAAAACTATTGCAT 57.539 34.783 0.00 0.00 0.00 3.96
406 448 4.920640 TTCCGTTCCAAAAACTATTGCA 57.079 36.364 0.00 0.00 0.00 4.08
407 449 6.089417 CAGATTTCCGTTCCAAAAACTATTGC 59.911 38.462 0.00 0.00 0.00 3.56
408 450 6.089417 GCAGATTTCCGTTCCAAAAACTATTG 59.911 38.462 0.00 0.00 0.00 1.90
409 451 6.156519 GCAGATTTCCGTTCCAAAAACTATT 58.843 36.000 0.00 0.00 0.00 1.73
410 452 5.242838 TGCAGATTTCCGTTCCAAAAACTAT 59.757 36.000 0.00 0.00 0.00 2.12
411 453 4.580995 TGCAGATTTCCGTTCCAAAAACTA 59.419 37.500 0.00 0.00 0.00 2.24
412 454 3.383185 TGCAGATTTCCGTTCCAAAAACT 59.617 39.130 0.00 0.00 0.00 2.66
413 455 3.489416 GTGCAGATTTCCGTTCCAAAAAC 59.511 43.478 0.00 0.00 0.00 2.43
414 456 3.383185 AGTGCAGATTTCCGTTCCAAAAA 59.617 39.130 0.00 0.00 0.00 1.94
415 457 2.955660 AGTGCAGATTTCCGTTCCAAAA 59.044 40.909 0.00 0.00 0.00 2.44
416 458 2.293122 CAGTGCAGATTTCCGTTCCAAA 59.707 45.455 0.00 0.00 0.00 3.28
417 459 1.879380 CAGTGCAGATTTCCGTTCCAA 59.121 47.619 0.00 0.00 0.00 3.53
418 460 1.071542 TCAGTGCAGATTTCCGTTCCA 59.928 47.619 0.00 0.00 0.00 3.53
419 461 1.464997 GTCAGTGCAGATTTCCGTTCC 59.535 52.381 0.00 0.00 0.00 3.62
420 462 2.096218 GTGTCAGTGCAGATTTCCGTTC 60.096 50.000 0.00 0.00 0.00 3.95
421 463 1.873591 GTGTCAGTGCAGATTTCCGTT 59.126 47.619 0.00 0.00 0.00 4.44
422 464 1.202639 TGTGTCAGTGCAGATTTCCGT 60.203 47.619 0.00 0.00 0.00 4.69
423 465 1.511850 TGTGTCAGTGCAGATTTCCG 58.488 50.000 0.00 0.00 0.00 4.30
424 466 2.415090 GCATGTGTCAGTGCAGATTTCC 60.415 50.000 5.48 0.00 40.94 3.13
425 467 2.415090 GGCATGTGTCAGTGCAGATTTC 60.415 50.000 11.15 0.00 43.00 2.17
426 468 1.542915 GGCATGTGTCAGTGCAGATTT 59.457 47.619 11.15 0.00 43.00 2.17
427 469 1.171308 GGCATGTGTCAGTGCAGATT 58.829 50.000 11.15 0.00 43.00 2.40
428 470 0.037160 TGGCATGTGTCAGTGCAGAT 59.963 50.000 11.15 0.00 43.00 2.90
429 471 0.037160 ATGGCATGTGTCAGTGCAGA 59.963 50.000 0.00 0.00 43.00 4.26
430 472 0.170339 CATGGCATGTGTCAGTGCAG 59.830 55.000 19.32 0.00 43.00 4.41
431 473 1.245376 CCATGGCATGTGTCAGTGCA 61.245 55.000 24.80 0.00 43.00 4.57
432 474 1.509463 CCATGGCATGTGTCAGTGC 59.491 57.895 24.80 2.25 40.55 4.40
433 475 1.509463 GCCATGGCATGTGTCAGTG 59.491 57.895 32.08 9.67 41.49 3.66
434 476 1.679977 GGCCATGGCATGTGTCAGT 60.680 57.895 36.56 0.00 44.11 3.41
435 477 1.040893 ATGGCCATGGCATGTGTCAG 61.041 55.000 36.56 11.05 46.89 3.51
436 478 1.000612 ATGGCCATGGCATGTGTCA 59.999 52.632 36.56 24.20 46.89 3.58
437 479 3.944123 ATGGCCATGGCATGTGTC 58.056 55.556 36.56 19.29 46.89 3.67
443 485 2.441348 CAGAGCATGGCCATGGCA 60.441 61.111 39.72 23.14 44.11 4.92
444 486 3.224324 CCAGAGCATGGCCATGGC 61.224 66.667 39.72 31.45 43.83 4.40
455 497 5.220681 GCACTACTAATTTAACTGCCAGAGC 60.221 44.000 0.00 0.00 40.48 4.09
456 498 5.294552 GGCACTACTAATTTAACTGCCAGAG 59.705 44.000 0.00 0.00 41.98 3.35
457 499 5.183228 GGCACTACTAATTTAACTGCCAGA 58.817 41.667 0.00 0.00 41.98 3.86
458 500 4.941263 TGGCACTACTAATTTAACTGCCAG 59.059 41.667 4.35 0.00 45.99 4.85
460 502 5.890424 TTGGCACTACTAATTTAACTGCC 57.110 39.130 0.00 0.00 42.59 4.85
461 503 6.801862 CACTTTGGCACTACTAATTTAACTGC 59.198 38.462 0.00 0.00 0.00 4.40
462 504 7.174253 TCCACTTTGGCACTACTAATTTAACTG 59.826 37.037 0.00 0.00 37.47 3.16
463 505 7.228590 TCCACTTTGGCACTACTAATTTAACT 58.771 34.615 0.00 0.00 37.47 2.24
464 506 7.443259 TCCACTTTGGCACTACTAATTTAAC 57.557 36.000 0.00 0.00 37.47 2.01
465 507 6.150474 GCTCCACTTTGGCACTACTAATTTAA 59.850 38.462 0.00 0.00 37.47 1.52
466 508 5.646360 GCTCCACTTTGGCACTACTAATTTA 59.354 40.000 0.00 0.00 37.47 1.40
467 509 4.459337 GCTCCACTTTGGCACTACTAATTT 59.541 41.667 0.00 0.00 37.47 1.82
468 510 4.010349 GCTCCACTTTGGCACTACTAATT 58.990 43.478 0.00 0.00 37.47 1.40
469 511 3.264450 AGCTCCACTTTGGCACTACTAAT 59.736 43.478 0.00 0.00 37.47 1.73
470 512 2.637872 AGCTCCACTTTGGCACTACTAA 59.362 45.455 0.00 0.00 37.47 2.24
471 513 2.028112 CAGCTCCACTTTGGCACTACTA 60.028 50.000 0.00 0.00 37.47 1.82
473 515 1.160137 CAGCTCCACTTTGGCACTAC 58.840 55.000 0.00 0.00 37.47 2.73
497 539 5.406175 ACAAAAACATTTGAGCATCGATTGG 59.594 36.000 8.18 0.00 38.61 3.16
499 541 5.107375 GCACAAAAACATTTGAGCATCGATT 60.107 36.000 15.51 0.00 44.27 3.34
503 545 5.464389 AGAAGCACAAAAACATTTGAGCATC 59.536 36.000 20.24 17.99 46.23 3.91
504 546 5.235616 CAGAAGCACAAAAACATTTGAGCAT 59.764 36.000 20.24 12.00 46.23 3.79
505 547 4.567558 CAGAAGCACAAAAACATTTGAGCA 59.432 37.500 20.24 0.00 46.23 4.26
506 548 4.567959 ACAGAAGCACAAAAACATTTGAGC 59.432 37.500 13.43 13.43 44.88 4.26
520 562 4.997395 TGAATTGGTCTAGAACAGAAGCAC 59.003 41.667 11.01 2.19 34.17 4.40
559 616 6.072838 ACAGACAAATGACTCTGCATAAACTG 60.073 38.462 0.00 0.00 37.96 3.16
586 643 6.467677 TCCTTCTAGTCTGTTCCAGAAATTG 58.532 40.000 0.00 0.00 42.46 2.32
592 2158 3.096092 AGCTCCTTCTAGTCTGTTCCAG 58.904 50.000 0.00 0.00 0.00 3.86
596 2162 6.402222 CATTTGTAGCTCCTTCTAGTCTGTT 58.598 40.000 0.00 0.00 0.00 3.16
645 2215 7.994425 TTACATCCACAAATCATACACTGTT 57.006 32.000 0.00 0.00 0.00 3.16
647 2217 7.988737 ACATTACATCCACAAATCATACACTG 58.011 34.615 0.00 0.00 0.00 3.66
850 4217 1.591863 GAGGAGGTATGCGGCGAAC 60.592 63.158 12.98 4.83 0.00 3.95
883 4260 1.539869 AGGATGAGTGGTGGTGGCT 60.540 57.895 0.00 0.00 0.00 4.75
977 4408 1.294659 CGCTGACAGGTTCTTGGCTC 61.295 60.000 4.26 0.00 0.00 4.70
1478 4991 5.064452 ACTCGCATTGAATTTGTGATCTCTC 59.936 40.000 0.00 0.00 33.48 3.20
1479 4992 4.940046 ACTCGCATTGAATTTGTGATCTCT 59.060 37.500 0.00 0.00 33.48 3.10
1480 4993 5.227238 ACTCGCATTGAATTTGTGATCTC 57.773 39.130 0.00 0.00 33.48 2.75
1481 4994 5.633830 AACTCGCATTGAATTTGTGATCT 57.366 34.783 0.00 0.00 33.48 2.75
1495 5008 3.119101 CCAACTACCTGAGTAACTCGCAT 60.119 47.826 0.00 0.00 37.44 4.73
1503 5016 1.278127 GCTTGGCCAACTACCTGAGTA 59.722 52.381 16.05 0.00 37.44 2.59
1541 5358 4.657075 AAATCTTTACGTGTTAGTGGCG 57.343 40.909 0.00 0.00 0.00 5.69
1569 5400 6.632834 CCAAATTCTGTACAAAAGAGTCAACG 59.367 38.462 0.00 0.00 0.00 4.10
1592 5423 2.970640 CTGGGATCAGATCAGATGTCCA 59.029 50.000 12.66 11.32 43.49 4.02
1606 5437 0.473326 AGCAAGCCTGATCTGGGATC 59.527 55.000 19.23 3.97 0.00 3.36
1607 5438 1.811778 TAGCAAGCCTGATCTGGGAT 58.188 50.000 19.23 5.57 0.00 3.85
1608 5439 1.811778 ATAGCAAGCCTGATCTGGGA 58.188 50.000 19.23 0.00 0.00 4.37
1609 5440 2.158711 TGAATAGCAAGCCTGATCTGGG 60.159 50.000 19.23 10.33 0.00 4.45
1625 5456 6.377996 AGCAAGGCAACATGTAGATTTGAATA 59.622 34.615 0.00 0.00 37.67 1.75
1633 5464 4.406972 AGAGATAGCAAGGCAACATGTAGA 59.593 41.667 0.00 0.00 37.67 2.59
1635 5466 4.080919 ACAGAGATAGCAAGGCAACATGTA 60.081 41.667 0.00 0.00 37.67 2.29
1639 5470 2.568956 AGACAGAGATAGCAAGGCAACA 59.431 45.455 0.00 0.00 41.41 3.33
1646 5477 6.007485 TCCTCTTCTAGACAGAGATAGCAA 57.993 41.667 22.90 7.57 40.39 3.91
1662 5493 2.164827 GGTCCGTTCTCTCTTCCTCTTC 59.835 54.545 0.00 0.00 0.00 2.87
1663 5494 2.172679 GGTCCGTTCTCTCTTCCTCTT 58.827 52.381 0.00 0.00 0.00 2.85
1664 5495 1.075698 TGGTCCGTTCTCTCTTCCTCT 59.924 52.381 0.00 0.00 0.00 3.69
1665 5496 1.202817 GTGGTCCGTTCTCTCTTCCTC 59.797 57.143 0.00 0.00 0.00 3.71
1666 5497 1.258676 GTGGTCCGTTCTCTCTTCCT 58.741 55.000 0.00 0.00 0.00 3.36
1735 6019 2.899900 TGATGGGATCATTACGAGAGGG 59.100 50.000 0.00 0.00 33.59 4.30
1752 6053 3.310774 GTGTCCATCGAGTTTGGATGATG 59.689 47.826 9.38 0.00 44.75 3.07
1754 6055 2.354704 GGTGTCCATCGAGTTTGGATGA 60.355 50.000 9.38 0.00 44.75 2.92
1766 6067 1.676014 CGGTTCTCAAGGGTGTCCATC 60.676 57.143 0.00 0.00 34.83 3.51
1770 6071 0.602905 CACCGGTTCTCAAGGGTGTC 60.603 60.000 2.97 0.00 43.82 3.67
1779 6080 3.397849 AGTTCTTAACCACCGGTTCTC 57.602 47.619 2.97 0.00 43.05 2.87
1784 6085 2.167900 CCCTCTAGTTCTTAACCACCGG 59.832 54.545 0.00 0.00 0.00 5.28
1810 6111 5.836024 TTGTTCTCTTTAGGCTTTAGGGA 57.164 39.130 0.00 0.00 0.00 4.20
1861 6196 6.271537 ACCTTTTCCATAAATTCCAGGGAAT 58.728 36.000 7.74 7.74 45.67 3.01
1864 6199 5.483583 TCAACCTTTTCCATAAATTCCAGGG 59.516 40.000 0.00 0.00 0.00 4.45
1871 6206 6.715264 ACGAGAGTTCAACCTTTTCCATAAAT 59.285 34.615 0.00 0.00 46.40 1.40
1881 6216 2.693591 TCAGACACGAGAGTTCAACCTT 59.306 45.455 0.00 0.00 46.40 3.50
1884 6219 3.670991 GTGATCAGACACGAGAGTTCAAC 59.329 47.826 0.00 0.00 46.40 3.18
1885 6220 3.317993 TGTGATCAGACACGAGAGTTCAA 59.682 43.478 0.00 0.00 46.40 2.69
1886 6221 2.884639 TGTGATCAGACACGAGAGTTCA 59.115 45.455 0.00 0.00 46.40 3.18
1887 6222 3.560902 TGTGATCAGACACGAGAGTTC 57.439 47.619 0.00 0.00 46.40 3.01
1907 6242 5.296780 CACTCACAAGTCAAACACACCTATT 59.703 40.000 0.00 0.00 31.71 1.73
1909 6244 4.188462 CACTCACAAGTCAAACACACCTA 58.812 43.478 0.00 0.00 31.71 3.08
1940 6275 9.741198 AGGAGGATTGTGAATGATATATAGGAT 57.259 33.333 0.00 0.00 0.00 3.24
1941 6276 9.206690 GAGGAGGATTGTGAATGATATATAGGA 57.793 37.037 0.00 0.00 0.00 2.94
1942 6277 8.140628 CGAGGAGGATTGTGAATGATATATAGG 58.859 40.741 0.00 0.00 0.00 2.57
1943 6278 8.907885 TCGAGGAGGATTGTGAATGATATATAG 58.092 37.037 0.00 0.00 0.00 1.31
1944 6279 8.823220 TCGAGGAGGATTGTGAATGATATATA 57.177 34.615 0.00 0.00 0.00 0.86
1945 6280 7.724490 TCGAGGAGGATTGTGAATGATATAT 57.276 36.000 0.00 0.00 0.00 0.86
1946 6281 7.539034 TTCGAGGAGGATTGTGAATGATATA 57.461 36.000 0.00 0.00 0.00 0.86
1947 6282 6.425210 TTCGAGGAGGATTGTGAATGATAT 57.575 37.500 0.00 0.00 0.00 1.63
1948 6283 5.869649 TTCGAGGAGGATTGTGAATGATA 57.130 39.130 0.00 0.00 0.00 2.15
1949 6284 4.760530 TTCGAGGAGGATTGTGAATGAT 57.239 40.909 0.00 0.00 0.00 2.45
1950 6285 4.253685 GTTTCGAGGAGGATTGTGAATGA 58.746 43.478 0.00 0.00 0.00 2.57
1951 6286 4.002982 TGTTTCGAGGAGGATTGTGAATG 58.997 43.478 0.00 0.00 0.00 2.67
1952 6287 4.256920 CTGTTTCGAGGAGGATTGTGAAT 58.743 43.478 0.00 0.00 0.00 2.57
1953 6288 3.557054 CCTGTTTCGAGGAGGATTGTGAA 60.557 47.826 1.15 0.00 34.69 3.18
1954 6289 2.028112 CCTGTTTCGAGGAGGATTGTGA 60.028 50.000 1.15 0.00 34.69 3.58
1955 6290 2.028112 TCCTGTTTCGAGGAGGATTGTG 60.028 50.000 5.31 0.00 37.20 3.33
1956 6291 2.257207 TCCTGTTTCGAGGAGGATTGT 58.743 47.619 5.31 0.00 37.20 2.71
1957 6292 3.550437 ATCCTGTTTCGAGGAGGATTG 57.450 47.619 13.50 0.00 45.60 2.67
1959 6294 3.519510 TGAAATCCTGTTTCGAGGAGGAT 59.480 43.478 13.50 13.50 45.60 3.24
1960 6295 2.903784 TGAAATCCTGTTTCGAGGAGGA 59.096 45.455 10.56 10.56 45.60 3.71
1961 6296 3.003480 GTGAAATCCTGTTTCGAGGAGG 58.997 50.000 0.00 0.00 45.60 4.30
1962 6297 3.003480 GGTGAAATCCTGTTTCGAGGAG 58.997 50.000 0.00 0.00 45.60 3.69
1963 6298 2.290071 GGGTGAAATCCTGTTTCGAGGA 60.290 50.000 0.00 0.00 46.47 3.71
1964 6299 2.084546 GGGTGAAATCCTGTTTCGAGG 58.915 52.381 0.00 0.00 0.00 4.63
1965 6300 2.744202 CAGGGTGAAATCCTGTTTCGAG 59.256 50.000 0.00 0.00 44.97 4.04
1966 6301 2.778299 CAGGGTGAAATCCTGTTTCGA 58.222 47.619 0.00 0.00 44.97 3.71
1973 6308 6.231211 CGTATATAAAGCAGGGTGAAATCCT 58.769 40.000 0.00 0.00 34.39 3.24
1974 6309 5.411669 CCGTATATAAAGCAGGGTGAAATCC 59.588 44.000 0.00 0.00 0.00 3.01
1975 6310 5.995897 ACCGTATATAAAGCAGGGTGAAATC 59.004 40.000 0.00 0.00 0.00 2.17
1976 6311 5.937111 ACCGTATATAAAGCAGGGTGAAAT 58.063 37.500 0.00 0.00 0.00 2.17
1977 6312 5.362105 ACCGTATATAAAGCAGGGTGAAA 57.638 39.130 0.00 0.00 0.00 2.69
1978 6313 6.463331 CCTTACCGTATATAAAGCAGGGTGAA 60.463 42.308 0.00 0.00 32.90 3.18
1979 6314 5.011329 CCTTACCGTATATAAAGCAGGGTGA 59.989 44.000 0.00 0.00 32.90 4.02
1980 6315 5.235516 CCTTACCGTATATAAAGCAGGGTG 58.764 45.833 0.00 0.00 32.90 4.61
1981 6316 4.285260 CCCTTACCGTATATAAAGCAGGGT 59.715 45.833 0.00 1.20 34.90 4.34
1982 6317 4.285260 ACCCTTACCGTATATAAAGCAGGG 59.715 45.833 11.34 11.34 37.68 4.45
1983 6318 5.011329 TCACCCTTACCGTATATAAAGCAGG 59.989 44.000 0.00 0.00 0.00 4.85
1984 6319 6.092955 TCACCCTTACCGTATATAAAGCAG 57.907 41.667 0.00 0.00 0.00 4.24
1985 6320 5.510179 GCTCACCCTTACCGTATATAAAGCA 60.510 44.000 0.00 0.00 0.00 3.91
1986 6321 4.928020 GCTCACCCTTACCGTATATAAAGC 59.072 45.833 0.00 0.00 0.00 3.51
1987 6322 6.092955 TGCTCACCCTTACCGTATATAAAG 57.907 41.667 0.00 0.00 0.00 1.85
1988 6323 6.495872 AGATGCTCACCCTTACCGTATATAAA 59.504 38.462 0.00 0.00 0.00 1.40
1989 6324 6.014647 AGATGCTCACCCTTACCGTATATAA 58.985 40.000 0.00 0.00 0.00 0.98
1990 6325 5.577100 AGATGCTCACCCTTACCGTATATA 58.423 41.667 0.00 0.00 0.00 0.86
1991 6326 4.417437 AGATGCTCACCCTTACCGTATAT 58.583 43.478 0.00 0.00 0.00 0.86
1992 6327 3.840991 AGATGCTCACCCTTACCGTATA 58.159 45.455 0.00 0.00 0.00 1.47
1993 6328 2.679082 AGATGCTCACCCTTACCGTAT 58.321 47.619 0.00 0.00 0.00 3.06
1994 6329 2.154567 AGATGCTCACCCTTACCGTA 57.845 50.000 0.00 0.00 0.00 4.02
1995 6330 1.066143 CAAGATGCTCACCCTTACCGT 60.066 52.381 0.00 0.00 0.00 4.83
1996 6331 1.066143 ACAAGATGCTCACCCTTACCG 60.066 52.381 0.00 0.00 0.00 4.02
1997 6332 2.789409 ACAAGATGCTCACCCTTACC 57.211 50.000 0.00 0.00 0.00 2.85
1998 6333 4.202245 TGTACAAGATGCTCACCCTTAC 57.798 45.455 0.00 0.00 0.00 2.34
1999 6334 4.441495 CGATGTACAAGATGCTCACCCTTA 60.441 45.833 0.00 0.00 0.00 2.69
2000 6335 3.679917 CGATGTACAAGATGCTCACCCTT 60.680 47.826 0.00 0.00 0.00 3.95
2001 6336 2.159043 CGATGTACAAGATGCTCACCCT 60.159 50.000 0.00 0.00 0.00 4.34
2002 6337 2.205074 CGATGTACAAGATGCTCACCC 58.795 52.381 0.00 0.00 0.00 4.61
2003 6338 2.860735 GACGATGTACAAGATGCTCACC 59.139 50.000 0.00 0.00 0.00 4.02
2004 6339 3.775202 AGACGATGTACAAGATGCTCAC 58.225 45.455 0.00 0.00 0.00 3.51
2005 6340 4.176271 CAAGACGATGTACAAGATGCTCA 58.824 43.478 0.00 0.00 0.00 4.26
2006 6341 3.000724 GCAAGACGATGTACAAGATGCTC 59.999 47.826 0.00 0.00 0.00 4.26
2007 6342 2.932614 GCAAGACGATGTACAAGATGCT 59.067 45.455 0.00 0.00 0.00 3.79
2008 6343 2.932614 AGCAAGACGATGTACAAGATGC 59.067 45.455 0.00 10.67 0.00 3.91
2009 6344 4.504461 GGTAGCAAGACGATGTACAAGATG 59.496 45.833 0.00 1.89 0.00 2.90
2010 6345 4.402793 AGGTAGCAAGACGATGTACAAGAT 59.597 41.667 0.00 0.00 0.00 2.40
2011 6346 3.762288 AGGTAGCAAGACGATGTACAAGA 59.238 43.478 0.00 0.00 0.00 3.02
2012 6347 4.111375 AGGTAGCAAGACGATGTACAAG 57.889 45.455 0.00 0.00 0.00 3.16
2013 6348 4.219944 AGAAGGTAGCAAGACGATGTACAA 59.780 41.667 0.00 0.00 0.00 2.41
2014 6349 3.762288 AGAAGGTAGCAAGACGATGTACA 59.238 43.478 0.00 0.00 0.00 2.90
2015 6350 4.373348 AGAAGGTAGCAAGACGATGTAC 57.627 45.455 0.00 0.00 0.00 2.90
2016 6351 5.826208 TCATAGAAGGTAGCAAGACGATGTA 59.174 40.000 0.00 0.00 0.00 2.29
2017 6352 4.645136 TCATAGAAGGTAGCAAGACGATGT 59.355 41.667 0.00 0.00 0.00 3.06
2018 6353 5.188327 TCATAGAAGGTAGCAAGACGATG 57.812 43.478 0.00 0.00 0.00 3.84
2019 6354 5.594725 TCTTCATAGAAGGTAGCAAGACGAT 59.405 40.000 6.89 0.00 0.00 3.73
2020 6355 4.948004 TCTTCATAGAAGGTAGCAAGACGA 59.052 41.667 6.89 0.00 0.00 4.20
2021 6356 5.250235 TCTTCATAGAAGGTAGCAAGACG 57.750 43.478 6.89 0.00 0.00 4.18
2022 6357 9.202273 CAATATCTTCATAGAAGGTAGCAAGAC 57.798 37.037 6.89 0.00 33.20 3.01
2023 6358 8.928448 ACAATATCTTCATAGAAGGTAGCAAGA 58.072 33.333 6.89 0.00 33.20 3.02
2054 6389 0.885196 TTTTGGAGTACGCCAATGGC 59.115 50.000 28.52 15.52 46.59 4.40
2055 6390 4.338118 ACATATTTTGGAGTACGCCAATGG 59.662 41.667 28.52 18.39 46.59 3.16
2057 6392 6.071616 ACAAACATATTTTGGAGTACGCCAAT 60.072 34.615 28.52 18.49 46.59 3.16
2058 6393 5.241949 ACAAACATATTTTGGAGTACGCCAA 59.758 36.000 25.13 25.13 45.77 4.52
2059 6394 4.762765 ACAAACATATTTTGGAGTACGCCA 59.237 37.500 15.03 15.03 35.78 5.69
2061 6396 5.019498 CGACAAACATATTTTGGAGTACGC 58.981 41.667 12.13 0.00 33.92 4.42
2063 6398 5.019498 CGCGACAAACATATTTTGGAGTAC 58.981 41.667 0.00 0.00 33.92 2.73
2064 6399 4.093703 CCGCGACAAACATATTTTGGAGTA 59.906 41.667 8.23 0.00 33.92 2.59
2066 6401 3.126171 TCCGCGACAAACATATTTTGGAG 59.874 43.478 8.23 8.12 33.92 3.86
2068 6403 3.479505 TCCGCGACAAACATATTTTGG 57.520 42.857 8.23 0.00 33.92 3.28
2069 6404 4.323336 CCTTTCCGCGACAAACATATTTTG 59.677 41.667 8.23 8.10 35.64 2.44
2070 6405 4.022676 ACCTTTCCGCGACAAACATATTTT 60.023 37.500 8.23 0.00 0.00 1.82
2071 6406 3.504520 ACCTTTCCGCGACAAACATATTT 59.495 39.130 8.23 0.00 0.00 1.40
2072 6407 3.078837 ACCTTTCCGCGACAAACATATT 58.921 40.909 8.23 0.00 0.00 1.28
2074 6409 2.070783 GACCTTTCCGCGACAAACATA 58.929 47.619 8.23 0.00 0.00 2.29
2075 6410 0.872388 GACCTTTCCGCGACAAACAT 59.128 50.000 8.23 0.00 0.00 2.71
2076 6411 0.179067 AGACCTTTCCGCGACAAACA 60.179 50.000 8.23 0.00 0.00 2.83
2077 6412 0.511653 GAGACCTTTCCGCGACAAAC 59.488 55.000 8.23 0.00 0.00 2.93
2078 6413 0.601841 GGAGACCTTTCCGCGACAAA 60.602 55.000 8.23 5.25 0.00 2.83
2080 6415 2.204461 TGGAGACCTTTCCGCGACA 61.204 57.895 8.23 0.00 40.27 4.35
2081 6416 1.737008 GTGGAGACCTTTCCGCGAC 60.737 63.158 8.23 0.00 40.27 5.19
2082 6417 2.654877 GTGGAGACCTTTCCGCGA 59.345 61.111 8.23 0.00 40.27 5.87
2083 6418 2.434359 GGTGGAGACCTTTCCGCG 60.434 66.667 0.00 0.00 46.45 6.46
2084 6419 2.434359 CGGTGGAGACCTTTCCGC 60.434 66.667 0.00 0.00 45.10 5.54
2085 6420 2.108278 AACCGGTGGAGACCTTTCCG 62.108 60.000 8.52 0.00 40.58 4.30
2086 6421 0.605589 CAACCGGTGGAGACCTTTCC 60.606 60.000 8.52 0.00 40.58 3.13
2087 6422 0.108019 ACAACCGGTGGAGACCTTTC 59.892 55.000 18.24 0.00 40.58 2.62
2088 6423 0.549469 AACAACCGGTGGAGACCTTT 59.451 50.000 18.24 0.00 40.58 3.11
2089 6424 0.108019 GAACAACCGGTGGAGACCTT 59.892 55.000 18.24 0.00 40.58 3.50
2090 6425 0.763223 AGAACAACCGGTGGAGACCT 60.763 55.000 18.24 3.68 40.58 3.85
2092 6427 0.602905 CCAGAACAACCGGTGGAGAC 60.603 60.000 18.24 6.35 31.04 3.36
2093 6428 1.752198 CCAGAACAACCGGTGGAGA 59.248 57.895 18.24 0.00 31.04 3.71
2094 6429 1.966451 GCCAGAACAACCGGTGGAG 60.966 63.158 18.24 8.30 31.04 3.86
2095 6430 2.112297 GCCAGAACAACCGGTGGA 59.888 61.111 18.24 0.00 31.04 4.02
2096 6431 2.203280 TGCCAGAACAACCGGTGG 60.203 61.111 8.52 8.06 0.00 4.61
2097 6432 2.908073 GCTGCCAGAACAACCGGTG 61.908 63.158 8.52 4.99 0.00 4.94
2098 6433 2.594592 GCTGCCAGAACAACCGGT 60.595 61.111 0.00 0.00 0.00 5.28
2102 6437 2.222027 AGTACAAGCTGCCAGAACAAC 58.778 47.619 0.00 0.00 0.00 3.32
2104 6439 2.638480 AAGTACAAGCTGCCAGAACA 57.362 45.000 0.00 0.00 0.00 3.18
2106 6441 3.550820 TCAAAAGTACAAGCTGCCAGAA 58.449 40.909 0.00 0.00 0.00 3.02
2107 6442 3.207265 TCAAAAGTACAAGCTGCCAGA 57.793 42.857 0.00 0.00 0.00 3.86
2108 6443 3.755378 AGATCAAAAGTACAAGCTGCCAG 59.245 43.478 0.00 0.00 0.00 4.85
2109 6444 3.753272 GAGATCAAAAGTACAAGCTGCCA 59.247 43.478 0.00 0.00 0.00 4.92
2111 6446 3.753272 TGGAGATCAAAAGTACAAGCTGC 59.247 43.478 0.00 0.00 0.00 5.25
2112 6447 5.947228 TTGGAGATCAAAAGTACAAGCTG 57.053 39.130 0.00 0.00 31.46 4.24
2114 6449 7.150783 AGAATTGGAGATCAAAAGTACAAGC 57.849 36.000 0.00 0.00 39.05 4.01
2115 6450 7.391554 TGGAGAATTGGAGATCAAAAGTACAAG 59.608 37.037 0.00 0.00 39.05 3.16
2116 6451 7.230747 TGGAGAATTGGAGATCAAAAGTACAA 58.769 34.615 0.00 0.00 39.05 2.41
2117 6452 6.778821 TGGAGAATTGGAGATCAAAAGTACA 58.221 36.000 0.00 0.00 39.05 2.90
2119 6454 7.632861 TCATGGAGAATTGGAGATCAAAAGTA 58.367 34.615 0.00 0.00 39.05 2.24
2120 6455 6.487828 TCATGGAGAATTGGAGATCAAAAGT 58.512 36.000 0.00 0.00 39.05 2.66
2121 6456 7.584122 ATCATGGAGAATTGGAGATCAAAAG 57.416 36.000 0.00 0.00 39.05 2.27
2123 6458 8.442374 TCATATCATGGAGAATTGGAGATCAAA 58.558 33.333 0.00 0.00 39.05 2.69
2125 6460 7.563724 TCATATCATGGAGAATTGGAGATCA 57.436 36.000 0.00 0.00 0.00 2.92
2126 6461 9.111613 GATTCATATCATGGAGAATTGGAGATC 57.888 37.037 0.00 0.00 31.35 2.75
2127 6462 7.769507 CGATTCATATCATGGAGAATTGGAGAT 59.230 37.037 0.00 0.00 31.35 2.75
2128 6463 7.101700 CGATTCATATCATGGAGAATTGGAGA 58.898 38.462 0.00 0.00 31.35 3.71
2130 6465 6.772605 ACGATTCATATCATGGAGAATTGGA 58.227 36.000 15.51 0.00 36.59 3.53
2131 6466 7.444629 AACGATTCATATCATGGAGAATTGG 57.555 36.000 15.51 9.42 36.59 3.16
2132 6467 9.817365 GTAAACGATTCATATCATGGAGAATTG 57.183 33.333 12.17 12.17 37.70 2.32
2134 6469 8.088365 TCGTAAACGATTCATATCATGGAGAAT 58.912 33.333 0.14 0.00 44.22 2.40
2135 6470 7.430441 TCGTAAACGATTCATATCATGGAGAA 58.570 34.615 0.14 0.00 44.22 2.87
2136 6471 6.977213 TCGTAAACGATTCATATCATGGAGA 58.023 36.000 0.14 0.00 44.22 3.71
2153 6488 5.737290 ACATACATACCGTACGTTCGTAAAC 59.263 40.000 15.21 0.00 31.27 2.01
2154 6489 5.874831 ACATACATACCGTACGTTCGTAAA 58.125 37.500 15.21 0.00 31.27 2.01
2155 6490 5.478233 ACATACATACCGTACGTTCGTAA 57.522 39.130 15.21 1.41 31.27 3.18
2156 6491 5.478233 AACATACATACCGTACGTTCGTA 57.522 39.130 15.21 9.77 30.96 3.43
2157 6492 4.355543 AACATACATACCGTACGTTCGT 57.644 40.909 15.21 7.69 30.96 3.85
2158 6493 5.965334 ACTAAACATACATACCGTACGTTCG 59.035 40.000 15.21 7.68 35.52 3.95
2159 6494 6.966632 TGACTAAACATACATACCGTACGTTC 59.033 38.462 15.21 0.00 35.52 3.95
2160 6495 6.851609 TGACTAAACATACATACCGTACGTT 58.148 36.000 15.21 1.59 38.09 3.99
2162 6497 6.746822 TGTTGACTAAACATACATACCGTACG 59.253 38.462 8.69 8.69 43.96 3.67
2185 6520 2.038659 CCAACCCTCAACAAACCATGT 58.961 47.619 0.00 0.00 46.82 3.21
2186 6521 2.035832 GTCCAACCCTCAACAAACCATG 59.964 50.000 0.00 0.00 0.00 3.66
2187 6522 2.316108 GTCCAACCCTCAACAAACCAT 58.684 47.619 0.00 0.00 0.00 3.55
2189 6524 0.666374 CGTCCAACCCTCAACAAACC 59.334 55.000 0.00 0.00 0.00 3.27
2190 6525 0.666374 CCGTCCAACCCTCAACAAAC 59.334 55.000 0.00 0.00 0.00 2.93
2191 6526 0.256464 ACCGTCCAACCCTCAACAAA 59.744 50.000 0.00 0.00 0.00 2.83
2192 6527 0.464735 CACCGTCCAACCCTCAACAA 60.465 55.000 0.00 0.00 0.00 2.83
2193 6528 1.147376 CACCGTCCAACCCTCAACA 59.853 57.895 0.00 0.00 0.00 3.33
2194 6529 1.599797 CCACCGTCCAACCCTCAAC 60.600 63.158 0.00 0.00 0.00 3.18
2195 6530 2.833227 CCACCGTCCAACCCTCAA 59.167 61.111 0.00 0.00 0.00 3.02
2196 6531 3.948719 GCCACCGTCCAACCCTCA 61.949 66.667 0.00 0.00 0.00 3.86
2197 6532 4.717313 GGCCACCGTCCAACCCTC 62.717 72.222 0.00 0.00 0.00 4.30
2199 6534 4.360405 ATGGCCACCGTCCAACCC 62.360 66.667 8.16 0.00 37.13 4.11
2200 6535 3.061848 CATGGCCACCGTCCAACC 61.062 66.667 8.16 0.00 37.13 3.77
2201 6536 3.061848 CCATGGCCACCGTCCAAC 61.062 66.667 8.16 0.00 37.13 3.77
2202 6537 4.358841 CCCATGGCCACCGTCCAA 62.359 66.667 8.16 0.00 37.13 3.53
2205 6540 4.041762 TTCCCCATGGCCACCGTC 62.042 66.667 8.16 0.00 0.00 4.79
2208 6543 2.679996 GTGTTCCCCATGGCCACC 60.680 66.667 8.16 0.00 30.98 4.61
2209 6544 1.228862 AAGTGTTCCCCATGGCCAC 60.229 57.895 8.16 9.84 34.95 5.01
2210 6545 1.228831 CAAGTGTTCCCCATGGCCA 60.229 57.895 8.56 8.56 0.00 5.36
2212 6547 0.039035 TACCAAGTGTTCCCCATGGC 59.961 55.000 6.09 0.00 34.45 4.40
2213 6548 1.834188 GTACCAAGTGTTCCCCATGG 58.166 55.000 4.14 4.14 37.19 3.66
2215 6550 1.061546 ACGTACCAAGTGTTCCCCAT 58.938 50.000 0.00 0.00 0.00 4.00
2216 6551 0.107081 CACGTACCAAGTGTTCCCCA 59.893 55.000 0.00 0.00 35.08 4.96
2217 6552 2.922779 CACGTACCAAGTGTTCCCC 58.077 57.895 0.00 0.00 35.08 4.81
2223 6558 4.986034 TGAATTAGACACACGTACCAAGTG 59.014 41.667 1.74 1.74 44.57 3.16
2224 6559 5.204409 TGAATTAGACACACGTACCAAGT 57.796 39.130 0.00 0.00 0.00 3.16
2226 6561 6.762187 TCTTTTGAATTAGACACACGTACCAA 59.238 34.615 0.00 0.00 0.00 3.67
2228 6563 6.423001 ACTCTTTTGAATTAGACACACGTACC 59.577 38.462 0.00 0.00 0.00 3.34
2229 6564 7.404139 ACTCTTTTGAATTAGACACACGTAC 57.596 36.000 0.00 0.00 0.00 3.67
2230 6565 7.170320 GGAACTCTTTTGAATTAGACACACGTA 59.830 37.037 0.00 0.00 0.00 3.57
2231 6566 6.018180 GGAACTCTTTTGAATTAGACACACGT 60.018 38.462 0.00 0.00 0.00 4.49
2232 6567 6.363473 GGAACTCTTTTGAATTAGACACACG 58.637 40.000 0.00 0.00 0.00 4.49
2233 6568 6.486993 AGGGAACTCTTTTGAATTAGACACAC 59.513 38.462 0.00 0.00 32.90 3.82
2234 6569 6.601332 AGGGAACTCTTTTGAATTAGACACA 58.399 36.000 0.00 0.00 32.90 3.72
2235 6570 7.511959 AAGGGAACTCTTTTGAATTAGACAC 57.488 36.000 0.00 0.00 42.68 3.67
2236 6571 8.533569 AAAAGGGAACTCTTTTGAATTAGACA 57.466 30.769 10.99 0.00 43.04 3.41
2262 6597 1.807742 CGGTGGAAGGCGTATGAAAAA 59.192 47.619 0.00 0.00 0.00 1.94
2266 6601 1.216977 CACGGTGGAAGGCGTATGA 59.783 57.895 0.00 0.00 0.00 2.15
2267 6602 1.813753 CCACGGTGGAAGGCGTATG 60.814 63.158 22.77 0.00 40.96 2.39
2268 6603 1.985662 TCCACGGTGGAAGGCGTAT 60.986 57.895 26.95 0.00 45.00 3.06
2281 6616 1.241315 AATGAAACCCGGCTTCCACG 61.241 55.000 10.93 0.00 0.00 4.94
2282 6617 1.471287 GTAATGAAACCCGGCTTCCAC 59.529 52.381 10.93 4.48 0.00 4.02
2283 6618 1.353022 AGTAATGAAACCCGGCTTCCA 59.647 47.619 10.93 0.00 0.00 3.53
2284 6619 2.124277 AGTAATGAAACCCGGCTTCC 57.876 50.000 10.93 0.00 0.00 3.46
2286 6621 3.057806 CGAAAAGTAATGAAACCCGGCTT 60.058 43.478 0.00 0.00 0.00 4.35
2287 6622 2.486592 CGAAAAGTAATGAAACCCGGCT 59.513 45.455 0.00 0.00 0.00 5.52
2288 6623 2.485038 TCGAAAAGTAATGAAACCCGGC 59.515 45.455 0.00 0.00 0.00 6.13
2290 6625 5.600908 TTCTCGAAAAGTAATGAAACCCG 57.399 39.130 0.00 0.00 0.00 5.28
2292 6627 7.415229 AGTGTTTCTCGAAAAGTAATGAAACC 58.585 34.615 15.67 9.74 41.13 3.27
2293 6628 8.734030 CAAGTGTTTCTCGAAAAGTAATGAAAC 58.266 33.333 12.94 12.94 41.76 2.78
2294 6629 8.455682 ACAAGTGTTTCTCGAAAAGTAATGAAA 58.544 29.630 0.00 0.00 31.33 2.69
2295 6630 7.908082 CACAAGTGTTTCTCGAAAAGTAATGAA 59.092 33.333 0.00 0.00 31.33 2.57
2297 6632 7.406553 TCACAAGTGTTTCTCGAAAAGTAATG 58.593 34.615 0.00 0.00 31.33 1.90
2298 6633 7.548196 TCACAAGTGTTTCTCGAAAAGTAAT 57.452 32.000 0.00 0.00 31.33 1.89
2299 6634 6.971527 TCACAAGTGTTTCTCGAAAAGTAA 57.028 33.333 0.00 0.00 31.33 2.24
2300 6635 6.369340 TGTTCACAAGTGTTTCTCGAAAAGTA 59.631 34.615 0.00 0.00 31.33 2.24
2301 6636 5.180492 TGTTCACAAGTGTTTCTCGAAAAGT 59.820 36.000 0.00 0.00 31.33 2.66
2302 6637 5.508224 GTGTTCACAAGTGTTTCTCGAAAAG 59.492 40.000 0.00 0.00 31.33 2.27
2303 6638 5.049336 TGTGTTCACAAGTGTTTCTCGAAAA 60.049 36.000 2.99 0.00 31.33 2.29
2309 6644 3.417101 TGGTGTGTTCACAAGTGTTTCT 58.583 40.909 7.22 0.00 45.45 2.52
2310 6645 3.840890 TGGTGTGTTCACAAGTGTTTC 57.159 42.857 7.22 0.00 45.45 2.78
2312 6647 3.153919 AGTTGGTGTGTTCACAAGTGTT 58.846 40.909 7.22 0.00 45.45 3.32
2313 6648 2.790433 AGTTGGTGTGTTCACAAGTGT 58.210 42.857 7.22 0.00 45.45 3.55
2314 6649 4.955925 TTAGTTGGTGTGTTCACAAGTG 57.044 40.909 7.22 0.00 45.45 3.16
2316 6651 4.772434 CGATTAGTTGGTGTGTTCACAAG 58.228 43.478 7.22 0.00 45.45 3.16
2317 6652 3.002862 GCGATTAGTTGGTGTGTTCACAA 59.997 43.478 7.22 0.00 45.45 3.33
2318 6653 2.546368 GCGATTAGTTGGTGTGTTCACA 59.454 45.455 1.23 1.23 45.45 3.58
2319 6654 2.806244 AGCGATTAGTTGGTGTGTTCAC 59.194 45.455 0.00 0.00 43.19 3.18
2320 6655 2.805671 CAGCGATTAGTTGGTGTGTTCA 59.194 45.455 0.00 0.00 33.47 3.18
2321 6656 2.159627 CCAGCGATTAGTTGGTGTGTTC 59.840 50.000 4.22 0.00 45.00 3.18
2322 6657 2.151202 CCAGCGATTAGTTGGTGTGTT 58.849 47.619 4.22 0.00 45.00 3.32
2329 6664 1.739466 ACATGCACCAGCGATTAGTTG 59.261 47.619 0.00 0.00 46.23 3.16
2330 6665 2.113860 ACATGCACCAGCGATTAGTT 57.886 45.000 0.00 0.00 46.23 2.24
2331 6666 1.739466 CAACATGCACCAGCGATTAGT 59.261 47.619 0.00 0.00 46.23 2.24
2332 6667 1.064505 CCAACATGCACCAGCGATTAG 59.935 52.381 0.00 0.00 46.23 1.73
2333 6668 1.093972 CCAACATGCACCAGCGATTA 58.906 50.000 0.00 0.00 46.23 1.75
2334 6669 1.885157 CCAACATGCACCAGCGATT 59.115 52.632 0.00 0.00 46.23 3.34
2335 6670 2.703798 GCCAACATGCACCAGCGAT 61.704 57.895 0.00 0.00 46.23 4.58
2336 6671 3.364441 GCCAACATGCACCAGCGA 61.364 61.111 0.00 0.00 46.23 4.93
2338 6673 4.424566 CGGCCAACATGCACCAGC 62.425 66.667 2.24 0.00 42.57 4.85
2339 6674 4.424566 GCGGCCAACATGCACCAG 62.425 66.667 2.24 0.00 0.00 4.00
2345 6680 2.535485 TAGTGGAGGCGGCCAACATG 62.535 60.000 23.09 0.00 40.20 3.21
2346 6681 2.297895 TAGTGGAGGCGGCCAACAT 61.298 57.895 23.09 11.28 40.20 2.71
2347 6682 2.925706 TAGTGGAGGCGGCCAACA 60.926 61.111 23.09 16.44 40.20 3.33
2352 6687 4.509737 GACGGTAGTGGAGGCGGC 62.510 72.222 0.00 0.00 0.00 6.53
2353 6688 2.898920 TAGGACGGTAGTGGAGGCGG 62.899 65.000 0.00 0.00 0.00 6.13
2354 6689 0.822532 ATAGGACGGTAGTGGAGGCG 60.823 60.000 0.00 0.00 0.00 5.52
2355 6690 0.960286 GATAGGACGGTAGTGGAGGC 59.040 60.000 0.00 0.00 0.00 4.70
2356 6691 2.231529 CTGATAGGACGGTAGTGGAGG 58.768 57.143 0.00 0.00 0.00 4.30
2358 6693 2.508716 AGACTGATAGGACGGTAGTGGA 59.491 50.000 0.00 0.00 0.00 4.02
2359 6694 2.933573 AGACTGATAGGACGGTAGTGG 58.066 52.381 0.00 0.00 0.00 4.00
2361 6696 7.657023 AATTAAAGACTGATAGGACGGTAGT 57.343 36.000 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.