Multiple sequence alignment - TraesCS5D01G501200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G501200 chr5D 100.000 3975 0 0 1 3975 529355915 529351941 0.000000e+00 7341
1 TraesCS5D01G501200 chr5A 85.714 2121 177 57 3 2044 657490995 657488922 0.000000e+00 2122
2 TraesCS5D01G501200 chr5A 92.239 670 37 10 2041 2706 657488853 657488195 0.000000e+00 935
3 TraesCS5D01G501200 chr5A 94.457 451 21 3 2907 3354 657488055 657487606 0.000000e+00 691
4 TraesCS5D01G501200 chr5A 91.473 129 10 1 2736 2864 657488194 657488067 4.080000e-40 176
5 TraesCS5D01G501200 chr5A 90.769 130 10 2 1336 1464 675839242 675839370 5.280000e-39 172
6 TraesCS5D01G501200 chr5A 83.920 199 11 6 1105 1284 675838959 675839155 1.900000e-38 171
7 TraesCS5D01G501200 chr5B 86.502 1252 84 31 836 2039 668194912 668193698 0.000000e+00 1297
8 TraesCS5D01G501200 chr5B 93.808 646 20 9 1 633 668196170 668195532 0.000000e+00 953
9 TraesCS5D01G501200 chr5B 86.486 777 72 17 2038 2807 668193574 668192824 0.000000e+00 822
10 TraesCS5D01G501200 chr5B 88.177 609 41 15 2871 3473 668192836 668192253 0.000000e+00 697
11 TraesCS5D01G501200 chr5B 85.000 120 6 5 702 809 668195493 668195374 1.170000e-20 111
12 TraesCS5D01G501200 chr2B 88.710 186 19 1 1570 1753 73073472 73073287 4.000000e-55 226
13 TraesCS5D01G501200 chr2B 90.769 130 10 2 1336 1464 681391297 681391425 5.280000e-39 172
14 TraesCS5D01G501200 chr2B 88.462 130 13 2 1336 1464 346738381 346738509 5.320000e-34 156
15 TraesCS5D01G501200 chr2B 86.466 133 16 2 1336 1467 131904215 131904084 1.150000e-30 145
16 TraesCS5D01G501200 chr6B 87.634 186 21 1 1570 1753 125201627 125201442 8.650000e-52 215
17 TraesCS5D01G501200 chr6D 90.226 133 11 2 1336 1467 42383740 42383609 5.280000e-39 172
18 TraesCS5D01G501200 chr4B 89.231 130 12 2 1336 1464 566638491 566638363 1.140000e-35 161
19 TraesCS5D01G501200 chr4B 89.831 118 10 2 1348 1464 40361885 40361769 2.470000e-32 150
20 TraesCS5D01G501200 chr4B 95.652 69 3 0 1427 1495 327139155 327139087 1.170000e-20 111
21 TraesCS5D01G501200 chr4D 82.915 199 13 9 1105 1284 149088757 149088561 4.110000e-35 159
22 TraesCS5D01G501200 chr1B 82.915 199 13 6 1105 1284 632854113 632853917 4.110000e-35 159
23 TraesCS5D01G501200 chr7A 88.148 135 10 3 1105 1235 636328516 636328384 5.320000e-34 156
24 TraesCS5D01G501200 chr1A 89.600 125 7 3 1105 1225 260084667 260084545 1.910000e-33 154
25 TraesCS5D01G501200 chr1A 87.407 135 11 3 1105 1235 10194355 10194223 2.470000e-32 150
26 TraesCS5D01G501200 chr4A 87.407 135 11 3 1105 1235 632372128 632372260 2.470000e-32 150


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G501200 chr5D 529351941 529355915 3974 True 7341 7341 100.00000 1 3975 1 chr5D.!!$R1 3974
1 TraesCS5D01G501200 chr5A 657487606 657490995 3389 True 981 2122 90.97075 3 3354 4 chr5A.!!$R1 3351
2 TraesCS5D01G501200 chr5B 668192253 668196170 3917 True 776 1297 87.99460 1 3473 5 chr5B.!!$R1 3472

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
726 760 0.625849 CCTGTAGGCCCATTGGAGTT 59.374 55.0 3.62 0.0 0.00 3.01 F
1106 1612 0.109781 ATGTGTGGTTGCGCGATTTC 60.110 50.0 12.10 0.0 0.00 2.17 F
1110 1616 0.179200 GTGGTTGCGCGATTTCGATT 60.179 50.0 12.10 0.0 43.02 3.34 F
1111 1617 0.519519 TGGTTGCGCGATTTCGATTT 59.480 45.0 12.10 0.0 43.02 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2145 2898 0.813184 AATTGGCTCACGGCATCAAG 59.187 50.000 0.00 0.00 45.87 3.02 R
2592 3354 1.537202 CTTGCCTGCCAGTACTTTGAC 59.463 52.381 0.00 0.00 0.00 3.18 R
2956 3727 2.124983 CACATCGGGGTCTGCTGG 60.125 66.667 0.00 0.00 0.00 4.85 R
3147 3920 1.077501 ATGATTCAGTGGCACGGGG 60.078 57.895 17.58 9.09 0.00 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
129 146 2.953648 TGATCTAAACGAGCGACCCATA 59.046 45.455 0.00 0.00 0.00 2.74
182 200 2.223994 GGGCGATACTACCTTGAAGGAC 60.224 54.545 19.83 1.35 37.67 3.85
634 658 4.890378 GGGAACGAAGCGATTTAACTTAC 58.110 43.478 0.00 0.00 0.00 2.34
638 662 7.148590 GGGAACGAAGCGATTTAACTTACTTTA 60.149 37.037 0.00 0.00 0.00 1.85
639 663 8.223100 GGAACGAAGCGATTTAACTTACTTTAA 58.777 33.333 0.00 0.00 0.00 1.52
663 697 3.393089 AATAGAGCCGCTTATCACCTG 57.607 47.619 0.00 0.00 0.00 4.00
688 722 2.115266 AGAAACGTGGGCCTTGGG 59.885 61.111 4.53 0.00 0.00 4.12
702 736 2.869503 CTTGGGCCGGCGAACATACT 62.870 60.000 22.54 0.00 0.00 2.12
709 743 2.499685 GCGAACATACTCGGGCCT 59.500 61.111 0.84 0.00 39.27 5.19
725 759 2.311287 CCTGTAGGCCCATTGGAGT 58.689 57.895 3.62 0.00 0.00 3.85
726 760 0.625849 CCTGTAGGCCCATTGGAGTT 59.374 55.000 3.62 0.00 0.00 3.01
728 762 2.158755 CCTGTAGGCCCATTGGAGTTAG 60.159 54.545 3.62 0.00 0.00 2.34
729 763 2.505819 CTGTAGGCCCATTGGAGTTAGT 59.494 50.000 3.62 0.00 0.00 2.24
730 764 2.238646 TGTAGGCCCATTGGAGTTAGTG 59.761 50.000 3.62 0.00 0.00 2.74
815 861 2.742372 TTTTCTCGCCGCTGCTCC 60.742 61.111 0.00 0.00 34.43 4.70
886 1377 4.992294 GCTCGCGAGATCTCCGGC 62.992 72.222 38.74 18.46 40.84 6.13
939 1445 2.363975 CGTCCCTTCCCCGGATGAA 61.364 63.158 0.73 4.40 38.50 2.57
1008 1514 3.121030 GTCGCGACAATGGCTGCT 61.121 61.111 33.09 0.00 0.00 4.24
1059 1565 4.884257 ATGGTACGCGCGCCGATT 62.884 61.111 32.58 13.11 41.02 3.34
1062 1568 2.515729 GGTACGCGCGCCGATTTTA 61.516 57.895 32.58 10.17 41.02 1.52
1070 1576 1.426041 GCGCCGATTTTAGCTTCCGA 61.426 55.000 0.00 0.00 0.00 4.55
1076 1582 4.265320 GCCGATTTTAGCTTCCGAATTTTG 59.735 41.667 0.00 0.00 0.00 2.44
1077 1583 5.636837 CCGATTTTAGCTTCCGAATTTTGA 58.363 37.500 0.00 0.00 0.00 2.69
1078 1584 6.265577 CCGATTTTAGCTTCCGAATTTTGAT 58.734 36.000 0.00 0.00 0.00 2.57
1079 1585 6.197096 CCGATTTTAGCTTCCGAATTTTGATG 59.803 38.462 0.00 0.00 0.00 3.07
1080 1586 6.747280 CGATTTTAGCTTCCGAATTTTGATGT 59.253 34.615 0.00 0.00 0.00 3.06
1084 1590 9.751542 TTTTAGCTTCCGAATTTTGATGTTTTA 57.248 25.926 0.00 0.00 0.00 1.52
1101 1607 2.815657 TTATTATGTGTGGTTGCGCG 57.184 45.000 0.00 0.00 0.00 6.86
1104 1610 1.160989 TTATGTGTGGTTGCGCGATT 58.839 45.000 12.10 0.00 0.00 3.34
1105 1611 1.160989 TATGTGTGGTTGCGCGATTT 58.839 45.000 12.10 0.00 0.00 2.17
1106 1612 0.109781 ATGTGTGGTTGCGCGATTTC 60.110 50.000 12.10 0.00 0.00 2.17
1107 1613 1.792057 GTGTGGTTGCGCGATTTCG 60.792 57.895 12.10 0.00 43.27 3.46
1108 1614 1.956678 TGTGGTTGCGCGATTTCGA 60.957 52.632 12.10 0.00 43.02 3.71
1110 1616 0.179200 GTGGTTGCGCGATTTCGATT 60.179 50.000 12.10 0.00 43.02 3.34
1111 1617 0.519519 TGGTTGCGCGATTTCGATTT 59.480 45.000 12.10 0.00 43.02 2.17
1112 1618 0.907171 GGTTGCGCGATTTCGATTTG 59.093 50.000 12.10 0.00 43.02 2.32
1113 1619 0.907171 GTTGCGCGATTTCGATTTGG 59.093 50.000 12.10 0.00 43.02 3.28
1114 1620 0.799393 TTGCGCGATTTCGATTTGGA 59.201 45.000 12.10 0.00 43.02 3.53
1230 1741 2.960819 GTGAGTGATTCGCCTGTTAGT 58.039 47.619 0.00 0.00 0.00 2.24
1257 1782 4.684134 CCTGGGTGGGGCTTGTGG 62.684 72.222 0.00 0.00 0.00 4.17
1308 1850 9.393512 GAGGTTACTTATGTAGTCTGAAGTAGA 57.606 37.037 0.00 0.00 38.33 2.59
1332 1874 3.862063 CTTGCACTTGTCGTGGCGC 62.862 63.158 0.00 0.00 43.97 6.53
1383 1932 7.172342 AGTTTGACAATTATAAGCCTGGTGTA 58.828 34.615 0.00 0.00 0.00 2.90
1384 1933 7.668052 AGTTTGACAATTATAAGCCTGGTGTAA 59.332 33.333 0.00 0.00 0.00 2.41
1495 2045 7.563020 TCTGAATAGAACTGCTTGATTGATCT 58.437 34.615 0.00 0.00 0.00 2.75
1528 2078 5.123186 TGACATTGTTGAACCGCTTAATAGG 59.877 40.000 0.00 0.00 0.00 2.57
1545 2095 1.290134 AGGATGGTCTTCCCTGAACC 58.710 55.000 0.01 0.00 36.35 3.62
1546 2096 1.203492 AGGATGGTCTTCCCTGAACCT 60.203 52.381 0.00 0.00 36.35 3.50
1547 2097 2.045885 AGGATGGTCTTCCCTGAACCTA 59.954 50.000 0.00 0.00 36.35 3.08
1548 2098 3.049344 GGATGGTCTTCCCTGAACCTAT 58.951 50.000 0.00 0.00 0.00 2.57
1549 2099 3.459969 GGATGGTCTTCCCTGAACCTATT 59.540 47.826 0.00 0.00 0.00 1.73
1550 2100 4.079730 GGATGGTCTTCCCTGAACCTATTT 60.080 45.833 0.00 0.00 0.00 1.40
1551 2101 4.301072 TGGTCTTCCCTGAACCTATTTG 57.699 45.455 0.00 0.00 0.00 2.32
1552 2102 3.017442 GGTCTTCCCTGAACCTATTTGC 58.983 50.000 0.00 0.00 0.00 3.68
1588 2138 4.022589 TGTGTGCACTACTGTTACTCTACC 60.023 45.833 19.41 0.00 0.00 3.18
1641 2194 2.151202 ACCTGTTGTTTATGTGCCGAG 58.849 47.619 0.00 0.00 0.00 4.63
1673 2226 2.566279 AGAGCTGTTTGATGAGCTGAGA 59.434 45.455 0.00 0.00 45.72 3.27
1698 2251 2.959516 TGACATTGTCGAACTGCCTAG 58.040 47.619 11.97 0.00 34.95 3.02
1725 2278 3.628008 TGATCTTCCATGAAGCTGCAAT 58.372 40.909 0.00 0.00 39.29 3.56
1735 2290 4.177165 TGAAGCTGCAATTAATGTGTGG 57.823 40.909 1.02 0.00 0.00 4.17
1789 2344 5.010516 CCTACTAGTCACATTGATCAGGAGG 59.989 48.000 0.00 4.64 35.88 4.30
1814 2369 6.875076 AGAGGTAGCATCACGTAATTTAGTT 58.125 36.000 0.00 0.00 0.00 2.24
1833 2388 8.746052 TTTAGTTATGTTGGCATGCTATTACT 57.254 30.769 18.92 16.42 36.58 2.24
1834 2389 8.746052 TTAGTTATGTTGGCATGCTATTACTT 57.254 30.769 18.92 8.43 36.58 2.24
1835 2390 7.031226 AGTTATGTTGGCATGCTATTACTTG 57.969 36.000 18.92 0.00 36.58 3.16
1836 2391 6.603201 AGTTATGTTGGCATGCTATTACTTGT 59.397 34.615 18.92 1.63 36.58 3.16
1837 2392 7.773224 AGTTATGTTGGCATGCTATTACTTGTA 59.227 33.333 18.92 0.75 36.58 2.41
1838 2393 8.402472 GTTATGTTGGCATGCTATTACTTGTAA 58.598 33.333 18.92 6.32 36.58 2.41
1839 2394 6.435430 TGTTGGCATGCTATTACTTGTAAG 57.565 37.500 18.92 0.00 0.00 2.34
1870 2425 2.562912 GCACCAAGATGCCGTGTG 59.437 61.111 0.00 0.00 39.86 3.82
1878 2433 1.443194 GATGCCGTGTGCTTTGCTG 60.443 57.895 0.00 0.00 42.00 4.41
1959 2514 8.469200 TGATGACAAGAGAGAATTTTGTGTTTT 58.531 29.630 0.00 0.00 35.35 2.43
1960 2515 8.638685 ATGACAAGAGAGAATTTTGTGTTTTG 57.361 30.769 0.00 0.00 35.35 2.44
2081 2834 6.460399 GGTGTATCATCCACTCTGTACTCTTC 60.460 46.154 0.00 0.00 33.31 2.87
2087 2840 3.898123 TCCACTCTGTACTCTTCTTGCTT 59.102 43.478 0.00 0.00 0.00 3.91
2125 2878 3.319122 GTGCCACATTATTCCTGAATCCC 59.681 47.826 0.00 0.00 32.50 3.85
2126 2879 3.205056 TGCCACATTATTCCTGAATCCCT 59.795 43.478 0.00 0.00 32.50 4.20
2127 2880 4.218312 GCCACATTATTCCTGAATCCCTT 58.782 43.478 0.00 0.00 32.50 3.95
2208 2961 5.750067 ACATGTTTGTTTTGAGAAGTGCATC 59.250 36.000 0.00 0.00 29.55 3.91
2237 2997 5.388408 AGGTACTTGGTCTTTCTAACTCG 57.612 43.478 0.00 0.00 27.25 4.18
2238 2998 5.075493 AGGTACTTGGTCTTTCTAACTCGA 58.925 41.667 0.00 0.00 27.25 4.04
2239 2999 5.537674 AGGTACTTGGTCTTTCTAACTCGAA 59.462 40.000 0.00 0.00 27.25 3.71
2240 3000 6.041296 AGGTACTTGGTCTTTCTAACTCGAAA 59.959 38.462 0.00 0.00 27.25 3.46
2241 3001 6.872547 GGTACTTGGTCTTTCTAACTCGAAAT 59.127 38.462 0.00 0.00 32.90 2.17
2242 3002 8.031277 GGTACTTGGTCTTTCTAACTCGAAATA 58.969 37.037 0.00 0.00 32.90 1.40
2280 3041 4.178545 ACACATTATTGCTTGGTTCTGC 57.821 40.909 0.00 0.00 0.00 4.26
2418 3179 3.568007 GTGGTCAAAATAGTCAAGTGGCA 59.432 43.478 0.00 0.00 0.00 4.92
2425 3186 6.939730 TCAAAATAGTCAAGTGGCATCTAACA 59.060 34.615 0.00 0.00 0.00 2.41
2445 3207 9.334947 TCTAACATCCATCAATCATCTCTTTTC 57.665 33.333 0.00 0.00 0.00 2.29
2592 3354 1.536766 AGTTGCATTGATCGGTGTGTG 59.463 47.619 0.00 0.00 0.00 3.82
2703 3470 3.429410 GCAAGAAAACACTTTCCTGTGCT 60.429 43.478 9.51 0.00 41.72 4.40
2706 3473 6.329496 CAAGAAAACACTTTCCTGTGCTTTA 58.671 36.000 0.00 0.00 41.72 1.85
2709 3476 7.555965 AGAAAACACTTTCCTGTGCTTTAAAT 58.444 30.769 0.00 0.00 41.72 1.40
2722 3489 8.950210 CCTGTGCTTTAAATTATCTCAGAGAAA 58.050 33.333 3.63 1.11 0.00 2.52
2798 3568 5.132897 TGTACCATGAATTTGCAGTTTCC 57.867 39.130 0.00 0.00 0.00 3.13
2801 3571 6.663093 TGTACCATGAATTTGCAGTTTCCTAT 59.337 34.615 0.00 0.00 0.00 2.57
2803 3573 7.100458 ACCATGAATTTGCAGTTTCCTATAC 57.900 36.000 0.00 0.00 0.00 1.47
2813 3583 7.023171 TGCAGTTTCCTATACCTTCCTTTTA 57.977 36.000 0.00 0.00 0.00 1.52
2843 3613 5.952387 TGCCTAGAAATAATAATGCCCAGT 58.048 37.500 0.00 0.00 0.00 4.00
2864 3634 7.390718 CCCAGTGGTTTAAATATCTACATAGCC 59.609 40.741 8.74 0.00 0.00 3.93
2865 3635 7.936847 CCAGTGGTTTAAATATCTACATAGCCA 59.063 37.037 0.00 0.00 0.00 4.75
2878 3648 7.630242 TCTACATAGCCATTTCTTTCCTTTG 57.370 36.000 0.00 0.00 0.00 2.77
2888 3658 6.587608 CCATTTCTTTCCTTTGCTTGATACAC 59.412 38.462 0.00 0.00 0.00 2.90
2892 3662 3.138884 TCCTTTGCTTGATACACTGCA 57.861 42.857 0.00 0.00 0.00 4.41
2893 3663 3.076621 TCCTTTGCTTGATACACTGCAG 58.923 45.455 13.48 13.48 36.75 4.41
2896 3666 4.022935 CCTTTGCTTGATACACTGCAGAAA 60.023 41.667 23.35 5.21 36.75 2.52
2904 3674 2.664402 ACACTGCAGAAACCCTCATT 57.336 45.000 23.35 0.00 0.00 2.57
2905 3675 2.949447 ACACTGCAGAAACCCTCATTT 58.051 42.857 23.35 0.00 0.00 2.32
2912 3682 3.367395 GCAGAAACCCTCATTTTGGCTAC 60.367 47.826 0.00 0.00 0.00 3.58
2913 3683 4.082125 CAGAAACCCTCATTTTGGCTACT 58.918 43.478 0.00 0.00 0.00 2.57
2914 3684 4.524328 CAGAAACCCTCATTTTGGCTACTT 59.476 41.667 0.00 0.00 0.00 2.24
2915 3685 4.767409 AGAAACCCTCATTTTGGCTACTTC 59.233 41.667 0.00 0.00 0.00 3.01
3147 3920 4.389576 CGCGCTTTCCAGTGGTGC 62.390 66.667 9.54 11.25 0.00 5.01
3148 3921 4.043200 GCGCTTTCCAGTGGTGCC 62.043 66.667 9.54 3.76 0.00 5.01
3175 3948 0.920763 ACTGAATCATGGGCAGGGGA 60.921 55.000 12.68 0.00 34.05 4.81
3270 4043 1.667236 CTGTGTGGCTGTGTCTGAAA 58.333 50.000 0.00 0.00 0.00 2.69
3274 4047 1.146041 TGGCTGTGTCTGAAACGCT 59.854 52.632 12.26 0.00 39.23 5.07
3310 4083 4.096984 GCATGGGTTCTTCTCTAATGTTGG 59.903 45.833 0.00 0.00 0.00 3.77
3321 4096 2.487762 TCTAATGTTGGCTCCTTTTGCG 59.512 45.455 0.00 0.00 0.00 4.85
3325 4101 0.040067 GTTGGCTCCTTTTGCGACTG 60.040 55.000 0.00 0.00 0.00 3.51
3351 4127 4.441495 CCGAAAGACCAGTGCTATCATGTA 60.441 45.833 0.00 0.00 0.00 2.29
3358 4134 3.006323 CCAGTGCTATCATGTACTCCCTC 59.994 52.174 0.00 0.00 30.70 4.30
3366 4142 7.290014 TGCTATCATGTACTCCCTCTATCAAAA 59.710 37.037 0.00 0.00 0.00 2.44
3428 4204 6.467677 ACGTCTCATATTTTGATATGGAGGG 58.532 40.000 6.57 0.00 35.71 4.30
3434 4210 9.610705 CTCATATTTTGATATGGAGGGAGTATG 57.389 37.037 6.57 0.00 35.71 2.39
3464 4240 5.116180 GGCATACATGAGTACTTGCTACAA 58.884 41.667 13.19 0.00 36.77 2.41
3473 4249 7.843490 TGAGTACTTGCTACAATTGAATACC 57.157 36.000 13.59 0.00 0.00 2.73
3474 4250 6.821665 TGAGTACTTGCTACAATTGAATACCC 59.178 38.462 13.59 0.00 0.00 3.69
3475 4251 6.120220 AGTACTTGCTACAATTGAATACCCC 58.880 40.000 13.59 0.00 0.00 4.95
3476 4252 4.278310 ACTTGCTACAATTGAATACCCCC 58.722 43.478 13.59 0.00 0.00 5.40
3477 4253 4.017499 ACTTGCTACAATTGAATACCCCCT 60.017 41.667 13.59 0.00 0.00 4.79
3478 4254 4.164843 TGCTACAATTGAATACCCCCTC 57.835 45.455 13.59 0.00 0.00 4.30
3479 4255 3.785887 TGCTACAATTGAATACCCCCTCT 59.214 43.478 13.59 0.00 0.00 3.69
3480 4256 4.137543 GCTACAATTGAATACCCCCTCTG 58.862 47.826 13.59 0.00 0.00 3.35
3481 4257 4.141482 GCTACAATTGAATACCCCCTCTGA 60.141 45.833 13.59 0.00 0.00 3.27
3482 4258 5.456763 GCTACAATTGAATACCCCCTCTGAT 60.457 44.000 13.59 0.00 0.00 2.90
3483 4259 5.053978 ACAATTGAATACCCCCTCTGATC 57.946 43.478 13.59 0.00 0.00 2.92
3484 4260 4.141158 ACAATTGAATACCCCCTCTGATCC 60.141 45.833 13.59 0.00 0.00 3.36
3485 4261 2.887454 TGAATACCCCCTCTGATCCA 57.113 50.000 0.00 0.00 0.00 3.41
3486 4262 3.144068 TGAATACCCCCTCTGATCCAA 57.856 47.619 0.00 0.00 0.00 3.53
3487 4263 2.777692 TGAATACCCCCTCTGATCCAAC 59.222 50.000 0.00 0.00 0.00 3.77
3488 4264 2.897823 ATACCCCCTCTGATCCAACT 57.102 50.000 0.00 0.00 0.00 3.16
3489 4265 2.661176 TACCCCCTCTGATCCAACTT 57.339 50.000 0.00 0.00 0.00 2.66
3490 4266 0.995024 ACCCCCTCTGATCCAACTTG 59.005 55.000 0.00 0.00 0.00 3.16
3491 4267 0.257039 CCCCCTCTGATCCAACTTGG 59.743 60.000 0.74 0.74 39.43 3.61
3514 4290 8.408043 TGGATACATCTCTTTGAACAACAATT 57.592 30.769 0.00 0.00 46.17 2.32
3515 4291 9.513906 TGGATACATCTCTTTGAACAACAATTA 57.486 29.630 0.00 0.00 46.17 1.40
3523 4299 9.528018 TCTCTTTGAACAACAATTAATTTGGAC 57.472 29.630 0.00 0.00 39.80 4.02
3524 4300 9.311916 CTCTTTGAACAACAATTAATTTGGACA 57.688 29.630 0.00 0.00 39.80 4.02
3525 4301 9.092876 TCTTTGAACAACAATTAATTTGGACAC 57.907 29.630 0.00 0.00 39.80 3.67
3526 4302 8.777865 TTTGAACAACAATTAATTTGGACACA 57.222 26.923 0.00 0.00 39.80 3.72
3527 4303 8.954950 TTGAACAACAATTAATTTGGACACAT 57.045 26.923 0.00 0.00 39.80 3.21
3528 4304 8.954950 TGAACAACAATTAATTTGGACACATT 57.045 26.923 0.00 0.00 39.80 2.71
3529 4305 9.039870 TGAACAACAATTAATTTGGACACATTC 57.960 29.630 0.00 0.00 39.80 2.67
3530 4306 8.954950 AACAACAATTAATTTGGACACATTCA 57.045 26.923 0.00 0.00 39.80 2.57
3531 4307 9.558396 AACAACAATTAATTTGGACACATTCAT 57.442 25.926 0.00 0.00 39.80 2.57
3532 4308 9.558396 ACAACAATTAATTTGGACACATTCATT 57.442 25.926 0.00 0.00 39.80 2.57
3535 4311 9.775854 ACAATTAATTTGGACACATTCATTTGA 57.224 25.926 0.00 0.00 39.80 2.69
3537 4313 9.439500 AATTAATTTGGACACATTCATTTGAGG 57.561 29.630 0.00 0.00 0.00 3.86
3538 4314 6.669125 AATTTGGACACATTCATTTGAGGA 57.331 33.333 0.00 0.00 0.00 3.71
3539 4315 5.452078 TTTGGACACATTCATTTGAGGAC 57.548 39.130 0.00 0.00 0.00 3.85
3540 4316 4.097551 TGGACACATTCATTTGAGGACA 57.902 40.909 0.00 0.00 0.00 4.02
3541 4317 4.468713 TGGACACATTCATTTGAGGACAA 58.531 39.130 0.00 0.00 0.00 3.18
3542 4318 5.078949 TGGACACATTCATTTGAGGACAAT 58.921 37.500 0.00 0.00 35.85 2.71
3543 4319 5.539574 TGGACACATTCATTTGAGGACAATT 59.460 36.000 0.00 0.00 35.85 2.32
3544 4320 6.718912 TGGACACATTCATTTGAGGACAATTA 59.281 34.615 0.00 0.00 35.85 1.40
3545 4321 7.232330 TGGACACATTCATTTGAGGACAATTAA 59.768 33.333 0.00 0.00 35.85 1.40
3546 4322 8.253113 GGACACATTCATTTGAGGACAATTAAT 58.747 33.333 0.00 0.00 35.85 1.40
3547 4323 9.643693 GACACATTCATTTGAGGACAATTAATT 57.356 29.630 0.00 0.00 35.85 1.40
3558 4334 9.973661 TTGAGGACAATTAATTTAGATCAAGGA 57.026 29.630 0.00 0.00 0.00 3.36
3559 4335 9.618890 TGAGGACAATTAATTTAGATCAAGGAG 57.381 33.333 0.00 0.00 0.00 3.69
3560 4336 9.620259 GAGGACAATTAATTTAGATCAAGGAGT 57.380 33.333 0.00 0.00 0.00 3.85
3573 4349 9.905713 TTAGATCAAGGAGTAAAATATGTTGCT 57.094 29.630 0.00 0.00 0.00 3.91
3574 4350 8.443953 AGATCAAGGAGTAAAATATGTTGCTC 57.556 34.615 13.76 13.76 38.93 4.26
3575 4351 8.049117 AGATCAAGGAGTAAAATATGTTGCTCA 58.951 33.333 21.14 5.32 40.75 4.26
3576 4352 7.994425 TCAAGGAGTAAAATATGTTGCTCAA 57.006 32.000 21.14 5.15 40.75 3.02
3577 4353 8.402798 TCAAGGAGTAAAATATGTTGCTCAAA 57.597 30.769 21.14 4.86 40.75 2.69
3578 4354 8.296713 TCAAGGAGTAAAATATGTTGCTCAAAC 58.703 33.333 21.14 7.83 40.75 2.93
3579 4355 6.842163 AGGAGTAAAATATGTTGCTCAAACG 58.158 36.000 21.14 0.00 40.75 3.60
3580 4356 6.027749 GGAGTAAAATATGTTGCTCAAACGG 58.972 40.000 21.14 0.00 40.75 4.44
3581 4357 6.128117 GGAGTAAAATATGTTGCTCAAACGGA 60.128 38.462 21.14 0.00 40.75 4.69
3582 4358 7.391148 AGTAAAATATGTTGCTCAAACGGAT 57.609 32.000 0.00 0.00 42.10 4.18
3583 4359 7.250569 AGTAAAATATGTTGCTCAAACGGATG 58.749 34.615 0.00 0.00 42.10 3.51
3584 4360 5.643379 AAATATGTTGCTCAAACGGATGT 57.357 34.783 0.00 0.00 42.10 3.06
3585 4361 6.751514 AAATATGTTGCTCAAACGGATGTA 57.248 33.333 0.00 0.00 42.10 2.29
3586 4362 6.942532 AATATGTTGCTCAAACGGATGTAT 57.057 33.333 0.00 0.00 42.10 2.29
3587 4363 4.882671 ATGTTGCTCAAACGGATGTATC 57.117 40.909 0.00 0.00 42.10 2.24
3588 4364 3.937814 TGTTGCTCAAACGGATGTATCT 58.062 40.909 0.00 0.00 42.10 1.98
3589 4365 5.079689 TGTTGCTCAAACGGATGTATCTA 57.920 39.130 0.00 0.00 42.10 1.98
3590 4366 5.109210 TGTTGCTCAAACGGATGTATCTAG 58.891 41.667 0.00 0.00 42.10 2.43
3591 4367 3.717707 TGCTCAAACGGATGTATCTAGC 58.282 45.455 0.00 0.00 0.00 3.42
3592 4368 3.132111 TGCTCAAACGGATGTATCTAGCA 59.868 43.478 0.00 0.00 35.26 3.49
3593 4369 4.202253 TGCTCAAACGGATGTATCTAGCAT 60.202 41.667 0.00 0.00 32.88 3.79
3594 4370 4.151335 GCTCAAACGGATGTATCTAGCATG 59.849 45.833 0.00 0.00 0.00 4.06
3595 4371 5.529581 TCAAACGGATGTATCTAGCATGA 57.470 39.130 0.00 0.00 0.00 3.07
3596 4372 5.912892 TCAAACGGATGTATCTAGCATGAA 58.087 37.500 0.00 0.00 0.00 2.57
3597 4373 6.345298 TCAAACGGATGTATCTAGCATGAAA 58.655 36.000 0.00 0.00 0.00 2.69
3598 4374 6.992123 TCAAACGGATGTATCTAGCATGAAAT 59.008 34.615 0.00 0.00 0.00 2.17
3599 4375 8.147704 TCAAACGGATGTATCTAGCATGAAATA 58.852 33.333 0.00 0.00 0.00 1.40
3600 4376 8.939929 CAAACGGATGTATCTAGCATGAAATAT 58.060 33.333 0.00 0.00 0.00 1.28
3603 4379 9.973450 ACGGATGTATCTAGCATGAAATATATC 57.027 33.333 0.00 1.79 0.00 1.63
3625 4401 6.807708 TCTAGATATTTTCGTTTGAGCGAC 57.192 37.500 0.00 0.00 40.85 5.19
3626 4402 6.327154 TCTAGATATTTTCGTTTGAGCGACA 58.673 36.000 0.00 0.00 40.85 4.35
3627 4403 5.856126 AGATATTTTCGTTTGAGCGACAA 57.144 34.783 0.00 0.00 40.85 3.18
3628 4404 5.858475 AGATATTTTCGTTTGAGCGACAAG 58.142 37.500 0.00 0.00 40.85 3.16
3629 4405 3.963383 ATTTTCGTTTGAGCGACAAGT 57.037 38.095 0.00 0.00 40.85 3.16
3630 4406 6.588756 AGATATTTTCGTTTGAGCGACAAGTA 59.411 34.615 0.00 0.00 40.85 2.24
3631 4407 4.861389 TTTTCGTTTGAGCGACAAGTAA 57.139 36.364 0.00 0.00 40.85 2.24
3632 4408 5.412526 TTTTCGTTTGAGCGACAAGTAAT 57.587 34.783 0.00 0.00 40.85 1.89
3633 4409 6.528014 TTTTCGTTTGAGCGACAAGTAATA 57.472 33.333 0.00 0.00 40.85 0.98
3634 4410 6.715344 TTTCGTTTGAGCGACAAGTAATAT 57.285 33.333 0.00 0.00 40.85 1.28
3635 4411 6.715344 TTCGTTTGAGCGACAAGTAATATT 57.285 33.333 0.00 0.00 40.85 1.28
3636 4412 6.089920 TCGTTTGAGCGACAAGTAATATTG 57.910 37.500 0.00 0.00 39.77 1.90
3637 4413 5.865013 TCGTTTGAGCGACAAGTAATATTGA 59.135 36.000 0.00 0.00 39.77 2.57
3638 4414 6.366604 TCGTTTGAGCGACAAGTAATATTGAA 59.633 34.615 0.00 0.00 39.77 2.69
3639 4415 7.064134 TCGTTTGAGCGACAAGTAATATTGAAT 59.936 33.333 0.00 0.00 39.77 2.57
3640 4416 8.325282 CGTTTGAGCGACAAGTAATATTGAATA 58.675 33.333 0.00 0.00 39.77 1.75
3641 4417 9.638300 GTTTGAGCGACAAGTAATATTGAATAG 57.362 33.333 0.00 0.00 39.77 1.73
3642 4418 9.594478 TTTGAGCGACAAGTAATATTGAATAGA 57.406 29.630 0.00 0.00 39.77 1.98
3643 4419 9.594478 TTGAGCGACAAGTAATATTGAATAGAA 57.406 29.630 0.00 0.00 34.20 2.10
3644 4420 9.594478 TGAGCGACAAGTAATATTGAATAGAAA 57.406 29.630 0.00 0.00 34.20 2.52
3660 4436 9.528018 TTGAATAGAAAAATGTTGTTCCTTGAC 57.472 29.630 0.00 0.00 0.00 3.18
3661 4437 8.690884 TGAATAGAAAAATGTTGTTCCTTGACA 58.309 29.630 0.00 0.00 0.00 3.58
3662 4438 8.871686 AATAGAAAAATGTTGTTCCTTGACAC 57.128 30.769 0.00 0.00 0.00 3.67
3663 4439 5.660460 AGAAAAATGTTGTTCCTTGACACC 58.340 37.500 0.00 0.00 0.00 4.16
3664 4440 3.708563 AAATGTTGTTCCTTGACACCG 57.291 42.857 0.00 0.00 0.00 4.94
3665 4441 2.631160 ATGTTGTTCCTTGACACCGA 57.369 45.000 0.00 0.00 0.00 4.69
3666 4442 1.948104 TGTTGTTCCTTGACACCGAG 58.052 50.000 0.00 0.00 0.00 4.63
3667 4443 1.208535 TGTTGTTCCTTGACACCGAGT 59.791 47.619 0.00 0.00 0.00 4.18
3678 4454 2.546778 GACACCGAGTCAACTTTGTGA 58.453 47.619 15.58 0.00 46.77 3.58
3679 4455 2.933906 GACACCGAGTCAACTTTGTGAA 59.066 45.455 15.58 0.00 46.77 3.18
3680 4456 2.676342 ACACCGAGTCAACTTTGTGAAC 59.324 45.455 15.58 0.00 34.19 3.18
3681 4457 2.936498 CACCGAGTCAACTTTGTGAACT 59.064 45.455 7.01 0.00 32.78 3.01
3682 4458 2.936498 ACCGAGTCAACTTTGTGAACTG 59.064 45.455 0.00 0.00 0.00 3.16
3683 4459 2.936498 CCGAGTCAACTTTGTGAACTGT 59.064 45.455 0.00 0.00 0.00 3.55
3684 4460 3.242413 CCGAGTCAACTTTGTGAACTGTG 60.242 47.826 0.00 0.00 0.00 3.66
3685 4461 3.242413 CGAGTCAACTTTGTGAACTGTGG 60.242 47.826 0.00 0.00 0.00 4.17
3686 4462 3.686016 AGTCAACTTTGTGAACTGTGGT 58.314 40.909 0.00 0.00 0.00 4.16
3687 4463 3.689649 AGTCAACTTTGTGAACTGTGGTC 59.310 43.478 0.00 0.00 0.00 4.02
3688 4464 2.675844 TCAACTTTGTGAACTGTGGTCG 59.324 45.455 0.00 0.00 0.00 4.79
3689 4465 1.014352 ACTTTGTGAACTGTGGTCGC 58.986 50.000 0.00 0.00 0.00 5.19
3690 4466 0.307760 CTTTGTGAACTGTGGTCGCC 59.692 55.000 0.00 0.00 0.00 5.54
3691 4467 0.393132 TTTGTGAACTGTGGTCGCCA 60.393 50.000 0.00 0.00 0.00 5.69
3692 4468 0.393132 TTGTGAACTGTGGTCGCCAA 60.393 50.000 0.00 0.00 34.18 4.52
3693 4469 0.813610 TGTGAACTGTGGTCGCCAAG 60.814 55.000 0.00 4.08 34.18 3.61
3694 4470 0.531974 GTGAACTGTGGTCGCCAAGA 60.532 55.000 0.00 0.00 34.18 3.02
3695 4471 0.249868 TGAACTGTGGTCGCCAAGAG 60.250 55.000 0.00 3.16 34.18 2.85
3696 4472 0.033504 GAACTGTGGTCGCCAAGAGA 59.966 55.000 0.00 0.00 34.18 3.10
3697 4473 0.249911 AACTGTGGTCGCCAAGAGAC 60.250 55.000 0.00 0.00 34.18 3.36
3698 4474 1.734477 CTGTGGTCGCCAAGAGACG 60.734 63.158 0.00 0.00 39.38 4.18
3699 4475 2.338984 GTGGTCGCCAAGAGACGT 59.661 61.111 0.00 0.00 39.38 4.34
3700 4476 1.733399 GTGGTCGCCAAGAGACGTC 60.733 63.158 7.70 7.70 39.38 4.34
3701 4477 2.504244 GGTCGCCAAGAGACGTCG 60.504 66.667 10.46 0.00 39.38 5.12
3702 4478 2.254651 GTCGCCAAGAGACGTCGT 59.745 61.111 10.46 0.00 0.00 4.34
3703 4479 1.499056 GTCGCCAAGAGACGTCGTA 59.501 57.895 10.46 0.00 0.00 3.43
3704 4480 0.098376 GTCGCCAAGAGACGTCGTAT 59.902 55.000 10.46 0.00 0.00 3.06
3705 4481 0.376152 TCGCCAAGAGACGTCGTATC 59.624 55.000 12.01 12.01 0.00 2.24
3706 4482 0.924363 CGCCAAGAGACGTCGTATCG 60.924 60.000 13.86 6.74 0.00 2.92
3707 4483 0.376152 GCCAAGAGACGTCGTATCGA 59.624 55.000 13.86 0.00 34.70 3.59
3708 4484 1.202110 GCCAAGAGACGTCGTATCGAA 60.202 52.381 13.86 0.00 37.72 3.71
3709 4485 2.706273 CCAAGAGACGTCGTATCGAAG 58.294 52.381 13.86 8.08 40.77 3.79
3711 4487 3.425892 CCAAGAGACGTCGTATCGAAGTT 60.426 47.826 13.86 0.77 46.83 2.66
3712 4488 4.156915 CAAGAGACGTCGTATCGAAGTTT 58.843 43.478 13.86 6.58 46.83 2.66
3713 4489 5.319139 CAAGAGACGTCGTATCGAAGTTTA 58.681 41.667 13.86 0.00 46.83 2.01
3714 4490 5.141355 AGAGACGTCGTATCGAAGTTTAG 57.859 43.478 13.86 0.00 46.83 1.85
3715 4491 4.867047 AGAGACGTCGTATCGAAGTTTAGA 59.133 41.667 13.86 0.00 46.83 2.10
3716 4492 5.005586 AGAGACGTCGTATCGAAGTTTAGAG 59.994 44.000 13.86 0.00 46.83 2.43
3717 4493 3.678662 ACGTCGTATCGAAGTTTAGAGC 58.321 45.455 0.00 0.00 44.92 4.09
3718 4494 3.125829 ACGTCGTATCGAAGTTTAGAGCA 59.874 43.478 0.00 0.00 44.92 4.26
3719 4495 4.093514 CGTCGTATCGAAGTTTAGAGCAA 58.906 43.478 0.00 0.00 37.72 3.91
3720 4496 4.028670 CGTCGTATCGAAGTTTAGAGCAAC 60.029 45.833 0.00 0.00 37.72 4.17
3721 4497 4.028670 GTCGTATCGAAGTTTAGAGCAACG 60.029 45.833 0.00 0.00 37.72 4.10
3722 4498 3.239941 CGTATCGAAGTTTAGAGCAACGG 59.760 47.826 0.00 0.00 0.00 4.44
3723 4499 1.425412 TCGAAGTTTAGAGCAACGGC 58.575 50.000 0.00 0.00 41.61 5.68
3724 4500 0.442699 CGAAGTTTAGAGCAACGGCC 59.557 55.000 0.00 0.00 42.56 6.13
3725 4501 1.519408 GAAGTTTAGAGCAACGGCCA 58.481 50.000 2.24 0.00 42.56 5.36
3726 4502 2.084546 GAAGTTTAGAGCAACGGCCAT 58.915 47.619 2.24 0.00 42.56 4.40
3727 4503 2.200373 AGTTTAGAGCAACGGCCATT 57.800 45.000 2.24 0.00 42.56 3.16
3728 4504 2.084546 AGTTTAGAGCAACGGCCATTC 58.915 47.619 2.24 0.00 42.56 2.67
3729 4505 1.810151 GTTTAGAGCAACGGCCATTCA 59.190 47.619 2.24 0.00 42.56 2.57
3730 4506 1.737838 TTAGAGCAACGGCCATTCAG 58.262 50.000 2.24 0.00 42.56 3.02
3731 4507 0.901827 TAGAGCAACGGCCATTCAGA 59.098 50.000 2.24 0.00 42.56 3.27
3732 4508 0.036732 AGAGCAACGGCCATTCAGAA 59.963 50.000 2.24 0.00 42.56 3.02
3733 4509 0.449388 GAGCAACGGCCATTCAGAAG 59.551 55.000 2.24 0.00 42.56 2.85
3734 4510 0.036732 AGCAACGGCCATTCAGAAGA 59.963 50.000 2.24 0.00 42.56 2.87
3735 4511 0.449388 GCAACGGCCATTCAGAAGAG 59.551 55.000 2.24 0.00 0.00 2.85
3736 4512 1.945819 GCAACGGCCATTCAGAAGAGA 60.946 52.381 2.24 0.00 0.00 3.10
3737 4513 2.636830 CAACGGCCATTCAGAAGAGAT 58.363 47.619 2.24 0.00 0.00 2.75
3738 4514 2.322355 ACGGCCATTCAGAAGAGATG 57.678 50.000 2.24 0.00 0.00 2.90
3739 4515 0.942962 CGGCCATTCAGAAGAGATGC 59.057 55.000 2.24 0.00 0.00 3.91
3740 4516 1.474677 CGGCCATTCAGAAGAGATGCT 60.475 52.381 2.24 0.00 0.00 3.79
3741 4517 1.948145 GGCCATTCAGAAGAGATGCTG 59.052 52.381 0.00 0.00 0.00 4.41
3742 4518 1.334243 GCCATTCAGAAGAGATGCTGC 59.666 52.381 0.00 0.00 32.27 5.25
3743 4519 2.640184 CCATTCAGAAGAGATGCTGCA 58.360 47.619 4.13 4.13 32.27 4.41
3744 4520 3.014623 CCATTCAGAAGAGATGCTGCAA 58.985 45.455 6.36 0.00 32.27 4.08
3745 4521 3.065510 CCATTCAGAAGAGATGCTGCAAG 59.934 47.826 6.36 0.00 32.27 4.01
3758 4534 2.060326 CTGCAAGCCAACAATGACAG 57.940 50.000 0.00 0.00 0.00 3.51
3759 4535 1.338973 CTGCAAGCCAACAATGACAGT 59.661 47.619 0.00 0.00 0.00 3.55
3760 4536 1.067364 TGCAAGCCAACAATGACAGTG 59.933 47.619 0.41 0.41 0.00 3.66
3761 4537 1.337703 GCAAGCCAACAATGACAGTGA 59.662 47.619 10.34 0.00 0.00 3.41
3762 4538 2.223782 GCAAGCCAACAATGACAGTGAA 60.224 45.455 10.34 0.00 0.00 3.18
3763 4539 3.737663 GCAAGCCAACAATGACAGTGAAA 60.738 43.478 10.34 0.00 0.00 2.69
3764 4540 4.431809 CAAGCCAACAATGACAGTGAAAA 58.568 39.130 10.34 0.00 0.00 2.29
3765 4541 4.311816 AGCCAACAATGACAGTGAAAAG 57.688 40.909 10.34 0.00 0.00 2.27
3766 4542 3.068590 AGCCAACAATGACAGTGAAAAGG 59.931 43.478 10.34 6.60 0.00 3.11
3767 4543 3.383761 CCAACAATGACAGTGAAAAGGC 58.616 45.455 10.34 0.00 0.00 4.35
3768 4544 3.383761 CAACAATGACAGTGAAAAGGCC 58.616 45.455 10.34 0.00 0.00 5.19
3769 4545 2.665165 ACAATGACAGTGAAAAGGCCA 58.335 42.857 10.34 0.00 0.00 5.36
3770 4546 3.030291 ACAATGACAGTGAAAAGGCCAA 58.970 40.909 10.34 0.00 0.00 4.52
3771 4547 3.450457 ACAATGACAGTGAAAAGGCCAAA 59.550 39.130 10.34 0.00 0.00 3.28
3772 4548 4.081198 ACAATGACAGTGAAAAGGCCAAAA 60.081 37.500 10.34 0.00 0.00 2.44
3773 4549 4.751767 ATGACAGTGAAAAGGCCAAAAA 57.248 36.364 5.01 0.00 0.00 1.94
3828 4604 9.887862 AAAAATCCTCCAATATATCATGTCCTT 57.112 29.630 0.00 0.00 0.00 3.36
3829 4605 8.874744 AAATCCTCCAATATATCATGTCCTTG 57.125 34.615 0.00 0.00 0.00 3.61
3830 4606 7.819521 ATCCTCCAATATATCATGTCCTTGA 57.180 36.000 0.00 0.00 0.00 3.02
3831 4607 7.819521 TCCTCCAATATATCATGTCCTTGAT 57.180 36.000 0.00 1.89 39.60 2.57
3832 4608 8.915813 TCCTCCAATATATCATGTCCTTGATA 57.084 34.615 5.63 5.63 41.52 2.15
3833 4609 9.337714 TCCTCCAATATATCATGTCCTTGATAA 57.662 33.333 6.89 0.13 40.85 1.75
3842 4618 9.812347 ATATCATGTCCTTGATAATAAAGGCAA 57.188 29.630 6.89 0.00 43.38 4.52
3843 4619 7.953005 TCATGTCCTTGATAATAAAGGCAAA 57.047 32.000 0.00 0.00 43.38 3.68
3844 4620 8.537728 TCATGTCCTTGATAATAAAGGCAAAT 57.462 30.769 0.00 0.00 43.38 2.32
3845 4621 8.415553 TCATGTCCTTGATAATAAAGGCAAATG 58.584 33.333 0.00 3.24 43.38 2.32
3846 4622 7.953005 TGTCCTTGATAATAAAGGCAAATGA 57.047 32.000 0.00 0.00 43.38 2.57
3847 4623 8.537728 TGTCCTTGATAATAAAGGCAAATGAT 57.462 30.769 0.00 0.00 43.38 2.45
3848 4624 8.415553 TGTCCTTGATAATAAAGGCAAATGATG 58.584 33.333 0.00 0.00 43.38 3.07
3849 4625 8.632679 GTCCTTGATAATAAAGGCAAATGATGA 58.367 33.333 0.00 0.00 43.38 2.92
3850 4626 9.370930 TCCTTGATAATAAAGGCAAATGATGAT 57.629 29.630 0.00 0.00 43.38 2.45
3854 4630 9.299465 TGATAATAAAGGCAAATGATGATAGCA 57.701 29.630 0.00 0.00 0.00 3.49
3855 4631 9.565213 GATAATAAAGGCAAATGATGATAGCAC 57.435 33.333 0.00 0.00 0.00 4.40
3856 4632 7.592885 AATAAAGGCAAATGATGATAGCACT 57.407 32.000 0.00 0.00 0.00 4.40
3857 4633 5.927281 AAAGGCAAATGATGATAGCACTT 57.073 34.783 0.00 0.00 0.00 3.16
3858 4634 5.927281 AAGGCAAATGATGATAGCACTTT 57.073 34.783 0.00 0.00 0.00 2.66
3859 4635 5.258456 AGGCAAATGATGATAGCACTTTG 57.742 39.130 7.69 7.69 0.00 2.77
3860 4636 4.708421 AGGCAAATGATGATAGCACTTTGT 59.292 37.500 11.70 0.00 0.00 2.83
3861 4637 4.802039 GGCAAATGATGATAGCACTTTGTG 59.198 41.667 11.70 0.00 36.51 3.33
3862 4638 4.802039 GCAAATGATGATAGCACTTTGTGG 59.198 41.667 11.70 0.00 33.64 4.17
3863 4639 5.345702 CAAATGATGATAGCACTTTGTGGG 58.654 41.667 0.00 0.00 33.64 4.61
3869 4645 3.042560 GCACTTTGTGGGCAGACC 58.957 61.111 0.00 0.00 46.29 3.85
3870 4646 1.529244 GCACTTTGTGGGCAGACCT 60.529 57.895 0.00 0.00 46.29 3.85
3871 4647 1.518903 GCACTTTGTGGGCAGACCTC 61.519 60.000 0.00 0.00 46.29 3.85
3872 4648 0.179020 CACTTTGTGGGCAGACCTCA 60.179 55.000 0.00 0.00 40.80 3.86
3876 4652 1.619654 TTGTGGGCAGACCTCAAATG 58.380 50.000 7.38 0.00 46.58 2.32
3877 4653 0.251297 TGTGGGCAGACCTCAAATGG 60.251 55.000 0.00 0.00 39.66 3.16
3878 4654 0.251341 GTGGGCAGACCTCAAATGGT 60.251 55.000 0.00 0.00 44.10 3.55
3888 4664 4.371624 ACCTCAAATGGTCATGTTCTCA 57.628 40.909 0.00 0.00 34.86 3.27
3889 4665 4.330250 ACCTCAAATGGTCATGTTCTCAG 58.670 43.478 0.00 0.00 34.86 3.35
3890 4666 4.202503 ACCTCAAATGGTCATGTTCTCAGT 60.203 41.667 0.00 0.00 34.86 3.41
3891 4667 4.763793 CCTCAAATGGTCATGTTCTCAGTT 59.236 41.667 0.00 0.00 0.00 3.16
3892 4668 5.939883 CCTCAAATGGTCATGTTCTCAGTTA 59.060 40.000 0.00 0.00 0.00 2.24
3893 4669 6.430925 CCTCAAATGGTCATGTTCTCAGTTAA 59.569 38.462 0.00 0.00 0.00 2.01
3894 4670 7.040478 CCTCAAATGGTCATGTTCTCAGTTAAA 60.040 37.037 0.00 0.00 0.00 1.52
3895 4671 8.231692 TCAAATGGTCATGTTCTCAGTTAAAA 57.768 30.769 0.00 0.00 0.00 1.52
3896 4672 8.859090 TCAAATGGTCATGTTCTCAGTTAAAAT 58.141 29.630 0.00 0.00 0.00 1.82
3900 4676 8.862325 TGGTCATGTTCTCAGTTAAAATATGT 57.138 30.769 0.00 0.00 0.00 2.29
3901 4677 9.295825 TGGTCATGTTCTCAGTTAAAATATGTT 57.704 29.630 0.00 0.00 0.00 2.71
3902 4678 9.559958 GGTCATGTTCTCAGTTAAAATATGTTG 57.440 33.333 0.00 0.00 0.00 3.33
3905 4681 9.897744 CATGTTCTCAGTTAAAATATGTTGTGT 57.102 29.630 0.00 0.00 0.00 3.72
3908 4684 9.821662 GTTCTCAGTTAAAATATGTTGTGTACC 57.178 33.333 0.00 0.00 0.00 3.34
3909 4685 9.787435 TTCTCAGTTAAAATATGTTGTGTACCT 57.213 29.630 0.00 0.00 0.00 3.08
3910 4686 9.787435 TCTCAGTTAAAATATGTTGTGTACCTT 57.213 29.630 0.00 0.00 0.00 3.50
3940 4716 4.990526 ACATCAGAATGTTCAGAAACCCT 58.009 39.130 0.00 0.00 43.74 4.34
3941 4717 4.763793 ACATCAGAATGTTCAGAAACCCTG 59.236 41.667 0.00 0.00 43.74 4.45
3942 4718 4.705110 TCAGAATGTTCAGAAACCCTGA 57.295 40.909 0.00 0.00 43.11 3.86
3943 4719 4.645535 TCAGAATGTTCAGAAACCCTGAG 58.354 43.478 0.00 0.00 43.83 3.35
3944 4720 4.103153 TCAGAATGTTCAGAAACCCTGAGT 59.897 41.667 0.00 0.00 43.83 3.41
3945 4721 5.974312 TCAGAATGTTCAGAAACCCTGAGTG 60.974 44.000 0.00 0.00 43.83 3.51
3948 4724 1.301716 TCAGAAACCCTGAGTGCGC 60.302 57.895 0.00 0.00 46.38 6.09
3949 4725 1.597854 CAGAAACCCTGAGTGCGCA 60.598 57.895 5.66 5.66 45.78 6.09
3950 4726 0.957395 CAGAAACCCTGAGTGCGCAT 60.957 55.000 15.91 1.95 45.78 4.73
3951 4727 0.957395 AGAAACCCTGAGTGCGCATG 60.957 55.000 15.91 4.42 0.00 4.06
3952 4728 1.228245 AAACCCTGAGTGCGCATGT 60.228 52.632 15.91 3.51 0.00 3.21
3953 4729 1.518056 AAACCCTGAGTGCGCATGTG 61.518 55.000 15.91 0.66 0.00 3.21
3954 4730 2.359107 CCCTGAGTGCGCATGTGT 60.359 61.111 15.91 0.00 0.00 3.72
3955 4731 2.683859 CCCTGAGTGCGCATGTGTG 61.684 63.158 15.91 2.43 0.00 3.82
3956 4732 1.962822 CCTGAGTGCGCATGTGTGT 60.963 57.895 15.91 0.00 0.00 3.72
3957 4733 1.205820 CTGAGTGCGCATGTGTGTG 59.794 57.895 15.91 0.00 38.87 3.82
3958 4734 1.501337 CTGAGTGCGCATGTGTGTGT 61.501 55.000 15.91 0.00 38.13 3.72
3959 4735 1.082561 GAGTGCGCATGTGTGTGTG 60.083 57.895 15.91 0.00 38.13 3.82
3964 4740 2.726912 GCATGTGTGTGTGCGTGC 60.727 61.111 0.00 0.00 39.89 5.34
3965 4741 2.425610 CATGTGTGTGTGCGTGCG 60.426 61.111 0.00 0.00 0.00 5.34
3966 4742 2.894879 ATGTGTGTGTGCGTGCGT 60.895 55.556 0.00 0.00 0.00 5.24
3967 4743 3.166953 ATGTGTGTGTGCGTGCGTG 62.167 57.895 0.00 0.00 0.00 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 56 2.003658 GCGTAATGTGCCATGGGGTG 62.004 60.000 15.13 0.00 36.17 4.61
491 515 4.337060 TCGGTGGTGTCGCTGTCG 62.337 66.667 0.00 0.00 0.00 4.35
492 516 2.733593 GTCGGTGGTGTCGCTGTC 60.734 66.667 0.00 0.00 0.00 3.51
688 722 2.960129 CCGAGTATGTTCGCCGGC 60.960 66.667 19.07 19.07 39.19 6.13
709 743 2.238646 CACTAACTCCAATGGGCCTACA 59.761 50.000 4.53 0.00 0.00 2.74
723 757 2.434336 TCATATGGGCTTCGCACTAACT 59.566 45.455 2.13 0.00 30.56 2.24
725 759 2.224281 CCTCATATGGGCTTCGCACTAA 60.224 50.000 2.13 0.00 30.56 2.24
726 760 1.344438 CCTCATATGGGCTTCGCACTA 59.656 52.381 2.13 0.00 30.56 2.74
728 762 1.510480 GCCTCATATGGGCTTCGCAC 61.510 60.000 21.40 0.00 45.57 5.34
729 763 1.227943 GCCTCATATGGGCTTCGCA 60.228 57.895 21.40 0.00 45.57 5.10
730 764 2.320587 CGCCTCATATGGGCTTCGC 61.321 63.158 24.11 11.22 46.73 4.70
760 806 2.238395 CTCCTTCTTTCTTGGAGGAGGG 59.762 54.545 10.28 0.00 39.91 4.30
867 1348 2.051435 CGGAGATCTCGCGAGCTG 60.051 66.667 30.97 17.62 35.72 4.24
888 1379 0.392060 CGTTTCTTACGGGGAAGGGG 60.392 60.000 0.00 0.00 46.42 4.79
889 1380 3.148340 CGTTTCTTACGGGGAAGGG 57.852 57.895 0.00 0.00 46.42 3.95
936 1442 2.771943 ACCGATCTAAGCAAGGGATTCA 59.228 45.455 0.00 0.00 0.00 2.57
939 1445 1.202698 GCACCGATCTAAGCAAGGGAT 60.203 52.381 0.00 0.00 0.00 3.85
1008 1514 3.691342 CTCCGCACGTCCTTGGGA 61.691 66.667 0.00 0.00 0.00 4.37
1056 1562 8.466086 AACATCAAAATTCGGAAGCTAAAATC 57.534 30.769 0.00 0.00 0.00 2.17
1059 1565 9.921637 ATAAAACATCAAAATTCGGAAGCTAAA 57.078 25.926 0.00 0.00 0.00 1.85
1076 1582 5.004345 GCGCAACCACACATAATAAAACATC 59.996 40.000 0.30 0.00 0.00 3.06
1077 1583 4.862018 GCGCAACCACACATAATAAAACAT 59.138 37.500 0.30 0.00 0.00 2.71
1078 1584 4.230657 GCGCAACCACACATAATAAAACA 58.769 39.130 0.30 0.00 0.00 2.83
1079 1585 3.299542 CGCGCAACCACACATAATAAAAC 59.700 43.478 8.75 0.00 0.00 2.43
1080 1586 3.188667 TCGCGCAACCACACATAATAAAA 59.811 39.130 8.75 0.00 0.00 1.52
1084 1590 1.378531 ATCGCGCAACCACACATAAT 58.621 45.000 8.75 0.00 0.00 1.28
1087 1593 0.109781 GAAATCGCGCAACCACACAT 60.110 50.000 8.75 0.00 0.00 3.21
1094 1600 0.907171 CCAAATCGAAATCGCGCAAC 59.093 50.000 8.75 0.00 39.60 4.17
1095 1601 0.799393 TCCAAATCGAAATCGCGCAA 59.201 45.000 8.75 0.00 39.60 4.85
1101 1607 6.241207 TCACAAACTCTCCAAATCGAAATC 57.759 37.500 0.00 0.00 0.00 2.17
1104 1610 5.304778 TCATCACAAACTCTCCAAATCGAA 58.695 37.500 0.00 0.00 0.00 3.71
1105 1611 4.893608 TCATCACAAACTCTCCAAATCGA 58.106 39.130 0.00 0.00 0.00 3.59
1106 1612 4.093998 CCTCATCACAAACTCTCCAAATCG 59.906 45.833 0.00 0.00 0.00 3.34
1107 1613 5.006386 ACCTCATCACAAACTCTCCAAATC 58.994 41.667 0.00 0.00 0.00 2.17
1108 1614 4.990526 ACCTCATCACAAACTCTCCAAAT 58.009 39.130 0.00 0.00 0.00 2.32
1110 1616 4.437682 AACCTCATCACAAACTCTCCAA 57.562 40.909 0.00 0.00 0.00 3.53
1111 1617 5.071788 AGTTAACCTCATCACAAACTCTCCA 59.928 40.000 0.88 0.00 0.00 3.86
1112 1618 5.409826 CAGTTAACCTCATCACAAACTCTCC 59.590 44.000 0.88 0.00 0.00 3.71
1113 1619 6.146347 GTCAGTTAACCTCATCACAAACTCTC 59.854 42.308 0.88 0.00 0.00 3.20
1114 1620 5.992217 GTCAGTTAACCTCATCACAAACTCT 59.008 40.000 0.88 0.00 0.00 3.24
1230 1741 2.521465 CACCCAGGTGGCAAGCAA 60.521 61.111 9.07 0.00 42.00 3.91
1257 1782 2.877168 GCATCAACCAGTGATCTGATCC 59.123 50.000 14.71 6.61 44.01 3.36
1308 1850 2.462889 CACGACAAGTGCAAGCAATTT 58.537 42.857 4.87 0.00 44.72 1.82
1332 1874 0.249238 GGCTACTCATCCGTCTGCAG 60.249 60.000 7.63 7.63 0.00 4.41
1383 1932 8.947055 AATCACTGAAGCAGTAAAAACATTTT 57.053 26.923 0.00 0.00 43.43 1.82
1384 1933 8.947055 AAATCACTGAAGCAGTAAAAACATTT 57.053 26.923 0.00 0.00 43.43 2.32
1528 2078 4.779993 AATAGGTTCAGGGAAGACCATC 57.220 45.455 0.00 0.00 43.89 3.51
1549 2099 1.615883 ACACACATTATTTGCGGGCAA 59.384 42.857 1.21 1.21 0.00 4.52
1550 2100 1.067985 CACACACATTATTTGCGGGCA 60.068 47.619 0.00 0.00 0.00 5.36
1551 2101 1.627879 CACACACATTATTTGCGGGC 58.372 50.000 0.00 0.00 0.00 6.13
1552 2102 1.067985 TGCACACACATTATTTGCGGG 60.068 47.619 0.00 0.00 35.90 6.13
1588 2138 7.995289 TGTGAAACTACATTATGCAATTAGGG 58.005 34.615 0.00 0.00 38.04 3.53
1621 2174 2.151202 CTCGGCACATAAACAACAGGT 58.849 47.619 0.00 0.00 0.00 4.00
1641 2194 8.654230 TCATCAAACAGCTCTATTCATAGTTC 57.346 34.615 0.00 0.00 0.00 3.01
1673 2226 4.943705 AGGCAGTTCGACAATGTCATTATT 59.056 37.500 14.24 0.00 32.09 1.40
1698 2251 5.049543 GCAGCTTCATGGAAGATCATTCTAC 60.050 44.000 10.01 0.00 41.71 2.59
1725 2278 6.210385 ACATTAACAAGCATCCCACACATTAA 59.790 34.615 0.00 0.00 0.00 1.40
1789 2344 6.505272 ACTAAATTACGTGATGCTACCTCTC 58.495 40.000 0.00 0.00 0.00 3.20
1814 2369 7.773224 ACTTACAAGTAATAGCATGCCAACATA 59.227 33.333 15.66 0.00 37.52 2.29
1833 2388 6.598457 TGGTGCTTACAAGTTACAACTTACAA 59.402 34.615 7.02 4.21 46.89 2.41
1834 2389 6.114089 TGGTGCTTACAAGTTACAACTTACA 58.886 36.000 7.02 0.00 46.89 2.41
1835 2390 6.607735 TGGTGCTTACAAGTTACAACTTAC 57.392 37.500 7.02 1.71 46.89 2.34
1836 2391 7.049133 TCTTGGTGCTTACAAGTTACAACTTA 58.951 34.615 7.02 0.00 46.89 2.24
1838 2393 5.433526 TCTTGGTGCTTACAAGTTACAACT 58.566 37.500 12.85 0.00 44.29 3.16
1839 2394 5.744666 TCTTGGTGCTTACAAGTTACAAC 57.255 39.130 12.85 0.00 44.29 3.32
1866 2421 3.040147 TCTACTACCAGCAAAGCACAC 57.960 47.619 0.00 0.00 0.00 3.82
1870 2425 5.044558 GTGAGTATCTACTACCAGCAAAGC 58.955 45.833 0.00 0.00 36.50 3.51
1959 2514 3.378742 AGCGTATTTGGAACACACAAACA 59.621 39.130 0.00 0.00 40.25 2.83
1960 2515 3.959943 AGCGTATTTGGAACACACAAAC 58.040 40.909 0.00 0.00 40.25 2.93
1993 2548 5.983475 GTCAGACTGACATTTCACAAGAAG 58.017 41.667 27.15 0.00 46.22 2.85
1994 2549 5.991328 GTCAGACTGACATTTCACAAGAA 57.009 39.130 27.15 0.00 46.22 2.52
2029 2584 6.712095 TGGTGAGGCTGCTAAATATTTATCAG 59.288 38.462 24.91 24.91 38.96 2.90
2051 2804 3.135348 CAGAGTGGATGATACACCATGGT 59.865 47.826 13.00 13.00 39.63 3.55
2081 2834 6.238320 GCACAATCTAACTATCTCCAAGCAAG 60.238 42.308 0.00 0.00 0.00 4.01
2087 2840 4.469586 TGTGGCACAATCTAACTATCTCCA 59.530 41.667 19.74 0.00 44.16 3.86
2132 2885 5.237127 CACGGCATCAAGATGTGTATACAAT 59.763 40.000 7.25 3.84 40.84 2.71
2134 2887 4.119136 CACGGCATCAAGATGTGTATACA 58.881 43.478 11.35 0.08 40.80 2.29
2135 2888 4.368315 TCACGGCATCAAGATGTGTATAC 58.632 43.478 11.35 0.00 40.80 1.47
2137 2890 3.461061 CTCACGGCATCAAGATGTGTAT 58.539 45.455 11.35 0.00 40.80 2.29
2145 2898 0.813184 AATTGGCTCACGGCATCAAG 59.187 50.000 0.00 0.00 45.87 3.02
2169 2922 5.010516 ACAAACATGTGTAAGCCTGCATAAA 59.989 36.000 0.00 0.00 0.00 1.40
2208 2961 5.298347 AGAAAGACCAAGTACCTTTTCTCG 58.702 41.667 0.00 0.00 31.06 4.04
2258 3019 4.764308 TGCAGAACCAAGCAATAATGTGTA 59.236 37.500 0.00 0.00 37.90 2.90
2265 3026 2.827322 AGCAATGCAGAACCAAGCAATA 59.173 40.909 8.35 0.00 44.88 1.90
2269 3030 1.796459 CAAAGCAATGCAGAACCAAGC 59.204 47.619 8.35 0.00 0.00 4.01
2280 3041 5.412526 AACAGCAAATCAACAAAGCAATG 57.587 34.783 0.00 0.00 0.00 2.82
2418 3179 9.863650 AAAAGAGATGATTGATGGATGTTAGAT 57.136 29.630 0.00 0.00 0.00 1.98
2425 3186 6.600822 ACAACGAAAAGAGATGATTGATGGAT 59.399 34.615 0.00 0.00 0.00 3.41
2445 3207 5.144359 GCTGTTAACCAATGAGTTACAACG 58.856 41.667 2.48 0.00 32.05 4.10
2505 3267 3.960102 AGAACAAATCACAGGAAAAGGCA 59.040 39.130 0.00 0.00 0.00 4.75
2592 3354 1.537202 CTTGCCTGCCAGTACTTTGAC 59.463 52.381 0.00 0.00 0.00 3.18
2670 3435 6.043854 AGTGTTTTCTTGCCCAAAGTAAAA 57.956 33.333 0.00 0.00 37.04 1.52
2671 3436 5.669164 AGTGTTTTCTTGCCCAAAGTAAA 57.331 34.783 0.00 0.00 37.18 2.01
2672 3437 5.669164 AAGTGTTTTCTTGCCCAAAGTAA 57.331 34.783 0.00 0.00 37.18 2.24
2673 3438 5.394773 GGAAAGTGTTTTCTTGCCCAAAGTA 60.395 40.000 0.69 0.00 41.92 2.24
2674 3439 4.503910 GAAAGTGTTTTCTTGCCCAAAGT 58.496 39.130 0.00 0.00 39.66 2.66
2748 3516 5.693769 AAGGTAGCTAGCAGTTCCAAATA 57.306 39.130 24.01 0.00 0.00 1.40
2817 3587 7.344352 ACTGGGCATTATTATTTCTAGGCAAAA 59.656 33.333 0.00 0.00 0.00 2.44
2864 3634 7.327761 CAGTGTATCAAGCAAAGGAAAGAAATG 59.672 37.037 0.00 0.00 0.00 2.32
2865 3635 7.373493 CAGTGTATCAAGCAAAGGAAAGAAAT 58.627 34.615 0.00 0.00 0.00 2.17
2867 3637 5.278463 GCAGTGTATCAAGCAAAGGAAAGAA 60.278 40.000 0.00 0.00 0.00 2.52
2868 3638 4.216257 GCAGTGTATCAAGCAAAGGAAAGA 59.784 41.667 0.00 0.00 0.00 2.52
2869 3639 4.022935 TGCAGTGTATCAAGCAAAGGAAAG 60.023 41.667 0.00 0.00 33.48 2.62
2870 3640 3.888323 TGCAGTGTATCAAGCAAAGGAAA 59.112 39.130 0.00 0.00 33.48 3.13
2871 3641 3.485394 TGCAGTGTATCAAGCAAAGGAA 58.515 40.909 0.00 0.00 33.48 3.36
2872 3642 3.076621 CTGCAGTGTATCAAGCAAAGGA 58.923 45.455 5.25 0.00 36.44 3.36
2873 3643 3.076621 TCTGCAGTGTATCAAGCAAAGG 58.923 45.455 14.67 0.00 36.44 3.11
2874 3644 4.754372 TTCTGCAGTGTATCAAGCAAAG 57.246 40.909 14.67 0.00 36.44 2.77
2878 3648 2.162408 GGGTTTCTGCAGTGTATCAAGC 59.838 50.000 14.67 7.67 0.00 4.01
2888 3658 2.611224 GCCAAAATGAGGGTTTCTGCAG 60.611 50.000 7.63 7.63 0.00 4.41
2892 3662 4.388577 AGTAGCCAAAATGAGGGTTTCT 57.611 40.909 0.00 0.00 38.04 2.52
2893 3663 4.767409 AGAAGTAGCCAAAATGAGGGTTTC 59.233 41.667 0.00 0.00 38.04 2.78
2896 3666 4.388577 AAGAAGTAGCCAAAATGAGGGT 57.611 40.909 0.00 0.00 40.53 4.34
2904 3674 5.067283 GTCACCTGAAAAAGAAGTAGCCAAA 59.933 40.000 0.00 0.00 0.00 3.28
2905 3675 4.578928 GTCACCTGAAAAAGAAGTAGCCAA 59.421 41.667 0.00 0.00 0.00 4.52
2912 3682 7.707104 ACAATGTTAGTCACCTGAAAAAGAAG 58.293 34.615 0.00 0.00 0.00 2.85
2913 3683 7.466725 CGACAATGTTAGTCACCTGAAAAAGAA 60.467 37.037 0.00 0.00 35.77 2.52
2914 3684 6.018262 CGACAATGTTAGTCACCTGAAAAAGA 60.018 38.462 0.00 0.00 35.77 2.52
2915 3685 6.136071 CGACAATGTTAGTCACCTGAAAAAG 58.864 40.000 0.00 0.00 35.77 2.27
2956 3727 2.124983 CACATCGGGGTCTGCTGG 60.125 66.667 0.00 0.00 0.00 4.85
3147 3920 1.077501 ATGATTCAGTGGCACGGGG 60.078 57.895 17.58 9.09 0.00 5.73
3148 3921 1.378882 CCATGATTCAGTGGCACGGG 61.379 60.000 17.58 11.61 0.00 5.28
3175 3948 5.890985 TGTACCAAATTATTACAGGCATGCT 59.109 36.000 18.92 0.00 0.00 3.79
3270 4043 2.037136 GCCAGCAGACATTCAGCGT 61.037 57.895 0.00 0.00 33.83 5.07
3274 4047 0.681887 CCCATGCCAGCAGACATTCA 60.682 55.000 0.00 0.00 0.00 2.57
3310 4083 0.238553 GGTTCAGTCGCAAAAGGAGC 59.761 55.000 0.00 0.00 0.00 4.70
3321 4096 2.135933 CACTGGTCTTTCGGTTCAGTC 58.864 52.381 0.00 0.00 36.66 3.51
3325 4101 2.450609 TAGCACTGGTCTTTCGGTTC 57.549 50.000 0.00 0.00 0.00 3.62
3405 4181 6.701340 TCCCTCCATATCAAAATATGAGACG 58.299 40.000 6.93 0.00 45.16 4.18
3409 4185 9.116080 ACATACTCCCTCCATATCAAAATATGA 57.884 33.333 6.93 0.00 45.16 2.15
3410 4186 9.745018 AACATACTCCCTCCATATCAAAATATG 57.255 33.333 0.00 0.00 42.97 1.78
3426 4202 2.736670 ATGCCCAAGAACATACTCCC 57.263 50.000 0.00 0.00 0.00 4.30
3428 4204 5.368145 TCATGTATGCCCAAGAACATACTC 58.632 41.667 12.75 0.00 45.72 2.59
3434 4210 4.770795 AGTACTCATGTATGCCCAAGAAC 58.229 43.478 0.00 0.00 0.00 3.01
3464 4240 3.680169 TGGATCAGAGGGGGTATTCAAT 58.320 45.455 0.00 0.00 0.00 2.57
3473 4249 1.289160 TCCAAGTTGGATCAGAGGGG 58.711 55.000 21.05 0.00 42.67 4.79
3483 4259 6.430925 TGTTCAAAGAGATGTATCCAAGTTGG 59.569 38.462 16.36 16.36 39.43 3.77
3484 4260 7.439157 TGTTCAAAGAGATGTATCCAAGTTG 57.561 36.000 0.00 0.00 0.00 3.16
3485 4261 7.502226 TGTTGTTCAAAGAGATGTATCCAAGTT 59.498 33.333 0.00 0.00 0.00 2.66
3486 4262 6.998074 TGTTGTTCAAAGAGATGTATCCAAGT 59.002 34.615 0.00 0.00 0.00 3.16
3487 4263 7.439157 TGTTGTTCAAAGAGATGTATCCAAG 57.561 36.000 0.00 0.00 0.00 3.61
3488 4264 7.815840 TTGTTGTTCAAAGAGATGTATCCAA 57.184 32.000 0.00 0.00 32.64 3.53
3489 4265 8.408043 AATTGTTGTTCAAAGAGATGTATCCA 57.592 30.769 0.00 0.00 39.62 3.41
3497 4273 9.528018 GTCCAAATTAATTGTTGTTCAAAGAGA 57.472 29.630 0.39 0.00 39.62 3.10
3498 4274 9.311916 TGTCCAAATTAATTGTTGTTCAAAGAG 57.688 29.630 0.39 0.00 39.62 2.85
3499 4275 9.092876 GTGTCCAAATTAATTGTTGTTCAAAGA 57.907 29.630 0.39 0.00 39.62 2.52
3500 4276 8.877779 TGTGTCCAAATTAATTGTTGTTCAAAG 58.122 29.630 0.39 0.00 39.62 2.77
3501 4277 8.777865 TGTGTCCAAATTAATTGTTGTTCAAA 57.222 26.923 0.39 0.00 39.62 2.69
3502 4278 8.954950 ATGTGTCCAAATTAATTGTTGTTCAA 57.045 26.923 0.39 0.00 40.53 2.69
3503 4279 8.954950 AATGTGTCCAAATTAATTGTTGTTCA 57.045 26.923 0.39 0.00 37.32 3.18
3504 4280 9.039870 TGAATGTGTCCAAATTAATTGTTGTTC 57.960 29.630 0.39 0.00 37.32 3.18
3505 4281 8.954950 TGAATGTGTCCAAATTAATTGTTGTT 57.045 26.923 0.39 0.00 37.32 2.83
3506 4282 9.558396 AATGAATGTGTCCAAATTAATTGTTGT 57.442 25.926 0.39 0.00 37.32 3.32
3509 4285 9.775854 TCAAATGAATGTGTCCAAATTAATTGT 57.224 25.926 0.39 0.00 37.32 2.71
3511 4287 9.439500 CCTCAAATGAATGTGTCCAAATTAATT 57.561 29.630 0.00 0.00 0.00 1.40
3512 4288 8.814931 TCCTCAAATGAATGTGTCCAAATTAAT 58.185 29.630 0.00 0.00 0.00 1.40
3513 4289 8.087750 GTCCTCAAATGAATGTGTCCAAATTAA 58.912 33.333 0.00 0.00 0.00 1.40
3514 4290 7.232330 TGTCCTCAAATGAATGTGTCCAAATTA 59.768 33.333 0.00 0.00 0.00 1.40
3515 4291 6.041865 TGTCCTCAAATGAATGTGTCCAAATT 59.958 34.615 0.00 0.00 0.00 1.82
3516 4292 5.539574 TGTCCTCAAATGAATGTGTCCAAAT 59.460 36.000 0.00 0.00 0.00 2.32
3517 4293 4.892345 TGTCCTCAAATGAATGTGTCCAAA 59.108 37.500 0.00 0.00 0.00 3.28
3518 4294 4.468713 TGTCCTCAAATGAATGTGTCCAA 58.531 39.130 0.00 0.00 0.00 3.53
3519 4295 4.097551 TGTCCTCAAATGAATGTGTCCA 57.902 40.909 0.00 0.00 0.00 4.02
3520 4296 5.649782 ATTGTCCTCAAATGAATGTGTCC 57.350 39.130 0.00 0.00 37.11 4.02
3521 4297 9.643693 AATTAATTGTCCTCAAATGAATGTGTC 57.356 29.630 0.00 0.00 37.11 3.67
3532 4308 9.973661 TCCTTGATCTAAATTAATTGTCCTCAA 57.026 29.630 0.39 8.41 37.98 3.02
3533 4309 9.618890 CTCCTTGATCTAAATTAATTGTCCTCA 57.381 33.333 0.39 1.21 0.00 3.86
3534 4310 9.620259 ACTCCTTGATCTAAATTAATTGTCCTC 57.380 33.333 0.39 0.00 0.00 3.71
3547 4323 9.905713 AGCAACATATTTTACTCCTTGATCTAA 57.094 29.630 0.00 0.00 0.00 2.10
3548 4324 9.547753 GAGCAACATATTTTACTCCTTGATCTA 57.452 33.333 0.00 0.00 0.00 1.98
3549 4325 8.049117 TGAGCAACATATTTTACTCCTTGATCT 58.951 33.333 0.00 0.00 0.00 2.75
3550 4326 8.213518 TGAGCAACATATTTTACTCCTTGATC 57.786 34.615 0.42 0.00 0.00 2.92
3551 4327 8.579850 TTGAGCAACATATTTTACTCCTTGAT 57.420 30.769 0.42 0.00 0.00 2.57
3552 4328 7.994425 TTGAGCAACATATTTTACTCCTTGA 57.006 32.000 0.42 0.00 0.00 3.02
3553 4329 7.271223 CGTTTGAGCAACATATTTTACTCCTTG 59.729 37.037 0.42 0.00 34.68 3.61
3554 4330 7.305474 CGTTTGAGCAACATATTTTACTCCTT 58.695 34.615 0.42 0.00 34.68 3.36
3555 4331 6.128007 CCGTTTGAGCAACATATTTTACTCCT 60.128 38.462 0.42 0.00 34.68 3.69
3556 4332 6.027749 CCGTTTGAGCAACATATTTTACTCC 58.972 40.000 0.42 0.00 34.68 3.85
3557 4333 6.837992 TCCGTTTGAGCAACATATTTTACTC 58.162 36.000 0.00 0.00 34.68 2.59
3558 4334 6.811253 TCCGTTTGAGCAACATATTTTACT 57.189 33.333 0.00 0.00 34.68 2.24
3559 4335 7.027161 ACATCCGTTTGAGCAACATATTTTAC 58.973 34.615 0.00 0.00 34.68 2.01
3560 4336 7.151999 ACATCCGTTTGAGCAACATATTTTA 57.848 32.000 0.00 0.00 34.68 1.52
3561 4337 6.024552 ACATCCGTTTGAGCAACATATTTT 57.975 33.333 0.00 0.00 34.68 1.82
3562 4338 5.643379 ACATCCGTTTGAGCAACATATTT 57.357 34.783 0.00 0.00 34.68 1.40
3563 4339 6.767902 AGATACATCCGTTTGAGCAACATATT 59.232 34.615 0.00 0.00 34.68 1.28
3564 4340 6.291377 AGATACATCCGTTTGAGCAACATAT 58.709 36.000 0.00 0.00 34.68 1.78
3565 4341 5.670485 AGATACATCCGTTTGAGCAACATA 58.330 37.500 0.00 0.00 34.68 2.29
3566 4342 4.517285 AGATACATCCGTTTGAGCAACAT 58.483 39.130 0.00 0.00 34.68 2.71
3567 4343 3.937814 AGATACATCCGTTTGAGCAACA 58.062 40.909 0.00 0.00 34.68 3.33
3568 4344 4.025647 GCTAGATACATCCGTTTGAGCAAC 60.026 45.833 0.00 0.00 0.00 4.17
3569 4345 4.119862 GCTAGATACATCCGTTTGAGCAA 58.880 43.478 0.00 0.00 0.00 3.91
3570 4346 3.132111 TGCTAGATACATCCGTTTGAGCA 59.868 43.478 0.00 0.00 35.18 4.26
3571 4347 3.717707 TGCTAGATACATCCGTTTGAGC 58.282 45.455 0.00 0.00 0.00 4.26
3572 4348 5.532557 TCATGCTAGATACATCCGTTTGAG 58.467 41.667 0.00 0.00 0.00 3.02
3573 4349 5.529581 TCATGCTAGATACATCCGTTTGA 57.470 39.130 0.00 0.00 0.00 2.69
3574 4350 6.603237 TTTCATGCTAGATACATCCGTTTG 57.397 37.500 0.00 0.00 0.00 2.93
3577 4353 9.973450 GATATATTTCATGCTAGATACATCCGT 57.027 33.333 0.00 0.00 0.00 4.69
3599 4375 9.130312 GTCGCTCAAACGAAAATATCTAGATAT 57.870 33.333 17.93 17.93 44.93 1.63
3600 4376 8.132995 TGTCGCTCAAACGAAAATATCTAGATA 58.867 33.333 14.76 14.76 44.93 1.98
3601 4377 6.978659 TGTCGCTCAAACGAAAATATCTAGAT 59.021 34.615 10.73 10.73 44.93 1.98
3602 4378 6.327154 TGTCGCTCAAACGAAAATATCTAGA 58.673 36.000 0.00 0.00 44.93 2.43
3603 4379 6.569228 TGTCGCTCAAACGAAAATATCTAG 57.431 37.500 0.00 0.00 44.93 2.43
3604 4380 6.588756 ACTTGTCGCTCAAACGAAAATATCTA 59.411 34.615 0.00 0.00 44.93 1.98
3605 4381 5.408604 ACTTGTCGCTCAAACGAAAATATCT 59.591 36.000 0.00 0.00 44.93 1.98
3606 4382 5.618561 ACTTGTCGCTCAAACGAAAATATC 58.381 37.500 0.00 0.00 44.93 1.63
3607 4383 5.607119 ACTTGTCGCTCAAACGAAAATAT 57.393 34.783 0.00 0.00 44.93 1.28
3608 4384 6.528014 TTACTTGTCGCTCAAACGAAAATA 57.472 33.333 0.00 0.00 44.93 1.40
3609 4385 3.963383 ACTTGTCGCTCAAACGAAAAT 57.037 38.095 0.00 0.00 44.93 1.82
3610 4386 4.861389 TTACTTGTCGCTCAAACGAAAA 57.139 36.364 0.00 0.00 44.93 2.29
3611 4387 6.715344 ATATTACTTGTCGCTCAAACGAAA 57.285 33.333 0.00 0.00 44.93 3.46
3612 4388 6.366604 TCAATATTACTTGTCGCTCAAACGAA 59.633 34.615 0.00 0.00 44.93 3.85
3613 4389 5.865013 TCAATATTACTTGTCGCTCAAACGA 59.135 36.000 0.00 0.00 40.36 3.85
3614 4390 6.089920 TCAATATTACTTGTCGCTCAAACG 57.910 37.500 0.00 0.00 35.48 3.60
3615 4391 9.638300 CTATTCAATATTACTTGTCGCTCAAAC 57.362 33.333 0.00 0.00 35.48 2.93
3616 4392 9.594478 TCTATTCAATATTACTTGTCGCTCAAA 57.406 29.630 0.00 0.00 35.48 2.69
3617 4393 9.594478 TTCTATTCAATATTACTTGTCGCTCAA 57.406 29.630 0.00 0.00 34.61 3.02
3618 4394 9.594478 TTTCTATTCAATATTACTTGTCGCTCA 57.406 29.630 0.00 0.00 0.00 4.26
3634 4410 9.528018 GTCAAGGAACAACATTTTTCTATTCAA 57.472 29.630 0.00 0.00 0.00 2.69
3635 4411 8.690884 TGTCAAGGAACAACATTTTTCTATTCA 58.309 29.630 0.00 0.00 0.00 2.57
3636 4412 8.968242 GTGTCAAGGAACAACATTTTTCTATTC 58.032 33.333 0.00 0.00 0.00 1.75
3637 4413 7.926018 GGTGTCAAGGAACAACATTTTTCTATT 59.074 33.333 0.00 0.00 36.83 1.73
3638 4414 7.433680 GGTGTCAAGGAACAACATTTTTCTAT 58.566 34.615 0.00 0.00 36.83 1.98
3639 4415 6.459024 CGGTGTCAAGGAACAACATTTTTCTA 60.459 38.462 0.00 0.00 36.63 2.10
3640 4416 5.660460 GGTGTCAAGGAACAACATTTTTCT 58.340 37.500 0.00 0.00 36.83 2.52
3641 4417 4.502645 CGGTGTCAAGGAACAACATTTTTC 59.497 41.667 0.00 0.00 36.63 2.29
3642 4418 4.158764 TCGGTGTCAAGGAACAACATTTTT 59.841 37.500 0.00 0.00 36.63 1.94
3643 4419 3.697045 TCGGTGTCAAGGAACAACATTTT 59.303 39.130 0.00 0.00 36.63 1.82
3644 4420 3.283751 TCGGTGTCAAGGAACAACATTT 58.716 40.909 0.00 0.00 36.63 2.32
3645 4421 2.878406 CTCGGTGTCAAGGAACAACATT 59.122 45.455 0.00 0.00 36.63 2.71
3646 4422 2.158813 ACTCGGTGTCAAGGAACAACAT 60.159 45.455 0.00 0.00 36.63 2.71
3647 4423 1.208535 ACTCGGTGTCAAGGAACAACA 59.791 47.619 0.00 0.00 36.63 3.33
3648 4424 1.865340 GACTCGGTGTCAAGGAACAAC 59.135 52.381 5.39 0.00 44.73 3.32
3649 4425 2.234300 GACTCGGTGTCAAGGAACAA 57.766 50.000 5.39 0.00 44.73 2.83
3650 4426 3.980583 GACTCGGTGTCAAGGAACA 57.019 52.632 5.39 0.00 44.73 3.18
3658 4434 2.546778 TCACAAAGTTGACTCGGTGTC 58.453 47.619 3.34 3.34 45.54 3.67
3659 4435 2.676342 GTTCACAAAGTTGACTCGGTGT 59.324 45.455 12.10 3.39 33.98 4.16
3660 4436 2.936498 AGTTCACAAAGTTGACTCGGTG 59.064 45.455 0.00 8.15 33.74 4.94
3661 4437 2.936498 CAGTTCACAAAGTTGACTCGGT 59.064 45.455 0.00 0.00 0.00 4.69
3662 4438 2.936498 ACAGTTCACAAAGTTGACTCGG 59.064 45.455 0.00 0.00 0.00 4.63
3663 4439 3.242413 CCACAGTTCACAAAGTTGACTCG 60.242 47.826 0.00 0.00 0.00 4.18
3664 4440 3.689649 ACCACAGTTCACAAAGTTGACTC 59.310 43.478 0.00 0.00 0.00 3.36
3665 4441 3.686016 ACCACAGTTCACAAAGTTGACT 58.314 40.909 0.00 0.00 0.00 3.41
3666 4442 3.485216 CGACCACAGTTCACAAAGTTGAC 60.485 47.826 0.00 0.00 0.00 3.18
3667 4443 2.675844 CGACCACAGTTCACAAAGTTGA 59.324 45.455 0.00 0.00 0.00 3.18
3668 4444 2.791158 GCGACCACAGTTCACAAAGTTG 60.791 50.000 0.00 0.00 0.00 3.16
3669 4445 1.400494 GCGACCACAGTTCACAAAGTT 59.600 47.619 0.00 0.00 0.00 2.66
3670 4446 1.014352 GCGACCACAGTTCACAAAGT 58.986 50.000 0.00 0.00 0.00 2.66
3671 4447 0.307760 GGCGACCACAGTTCACAAAG 59.692 55.000 0.00 0.00 0.00 2.77
3672 4448 0.393132 TGGCGACCACAGTTCACAAA 60.393 50.000 0.00 0.00 0.00 2.83
3673 4449 0.393132 TTGGCGACCACAGTTCACAA 60.393 50.000 0.00 0.00 30.78 3.33
3674 4450 0.813610 CTTGGCGACCACAGTTCACA 60.814 55.000 0.00 0.00 30.78 3.58
3675 4451 0.531974 TCTTGGCGACCACAGTTCAC 60.532 55.000 0.00 0.00 30.78 3.18
3676 4452 0.249868 CTCTTGGCGACCACAGTTCA 60.250 55.000 0.00 0.00 30.78 3.18
3677 4453 0.033504 TCTCTTGGCGACCACAGTTC 59.966 55.000 0.00 0.00 30.78 3.01
3678 4454 0.249911 GTCTCTTGGCGACCACAGTT 60.250 55.000 0.00 0.00 30.78 3.16
3679 4455 1.367840 GTCTCTTGGCGACCACAGT 59.632 57.895 0.00 0.00 30.78 3.55
3680 4456 1.734477 CGTCTCTTGGCGACCACAG 60.734 63.158 0.00 0.00 30.78 3.66
3681 4457 2.338620 CGTCTCTTGGCGACCACA 59.661 61.111 0.00 0.00 30.78 4.17
3682 4458 1.733399 GACGTCTCTTGGCGACCAC 60.733 63.158 8.70 0.00 30.78 4.16
3683 4459 2.649034 GACGTCTCTTGGCGACCA 59.351 61.111 8.70 0.00 0.00 4.02
3684 4460 1.915614 TACGACGTCTCTTGGCGACC 61.916 60.000 14.70 0.00 0.00 4.79
3685 4461 0.098376 ATACGACGTCTCTTGGCGAC 59.902 55.000 14.70 0.00 0.00 5.19
3686 4462 0.376152 GATACGACGTCTCTTGGCGA 59.624 55.000 14.70 0.00 0.00 5.54
3687 4463 0.924363 CGATACGACGTCTCTTGGCG 60.924 60.000 14.70 6.05 0.00 5.69
3688 4464 0.376152 TCGATACGACGTCTCTTGGC 59.624 55.000 14.70 0.00 34.70 4.52
3689 4465 2.095532 ACTTCGATACGACGTCTCTTGG 59.904 50.000 14.70 0.00 33.25 3.61
3690 4466 3.386613 ACTTCGATACGACGTCTCTTG 57.613 47.619 14.70 0.00 33.25 3.02
3691 4467 4.416505 AAACTTCGATACGACGTCTCTT 57.583 40.909 14.70 0.00 37.37 2.85
3692 4468 4.867047 TCTAAACTTCGATACGACGTCTCT 59.133 41.667 14.70 0.63 37.37 3.10
3693 4469 5.136250 TCTAAACTTCGATACGACGTCTC 57.864 43.478 14.70 3.04 37.37 3.36
3694 4470 4.493872 GCTCTAAACTTCGATACGACGTCT 60.494 45.833 14.70 0.00 37.37 4.18
3695 4471 3.718377 GCTCTAAACTTCGATACGACGTC 59.282 47.826 2.43 5.18 37.37 4.34
3696 4472 3.125829 TGCTCTAAACTTCGATACGACGT 59.874 43.478 5.52 5.52 39.90 4.34
3697 4473 3.677601 TGCTCTAAACTTCGATACGACG 58.322 45.455 0.00 0.00 34.89 5.12
3698 4474 4.028670 CGTTGCTCTAAACTTCGATACGAC 60.029 45.833 0.00 0.00 34.89 4.34
3699 4475 4.093514 CGTTGCTCTAAACTTCGATACGA 58.906 43.478 0.00 0.00 0.00 3.43
3700 4476 3.239941 CCGTTGCTCTAAACTTCGATACG 59.760 47.826 0.00 0.00 0.00 3.06
3701 4477 3.000022 GCCGTTGCTCTAAACTTCGATAC 60.000 47.826 0.00 0.00 33.53 2.24
3702 4478 3.184541 GCCGTTGCTCTAAACTTCGATA 58.815 45.455 0.00 0.00 33.53 2.92
3703 4479 2.000447 GCCGTTGCTCTAAACTTCGAT 59.000 47.619 0.00 0.00 33.53 3.59
3704 4480 1.425412 GCCGTTGCTCTAAACTTCGA 58.575 50.000 0.00 0.00 33.53 3.71
3705 4481 0.442699 GGCCGTTGCTCTAAACTTCG 59.557 55.000 0.00 0.00 37.74 3.79
3706 4482 1.519408 TGGCCGTTGCTCTAAACTTC 58.481 50.000 0.00 0.00 37.74 3.01
3707 4483 2.200373 ATGGCCGTTGCTCTAAACTT 57.800 45.000 0.00 0.00 37.74 2.66
3708 4484 2.084546 GAATGGCCGTTGCTCTAAACT 58.915 47.619 16.85 0.00 37.74 2.66
3709 4485 1.810151 TGAATGGCCGTTGCTCTAAAC 59.190 47.619 16.85 0.00 37.74 2.01
3710 4486 2.083774 CTGAATGGCCGTTGCTCTAAA 58.916 47.619 16.85 0.00 37.74 1.85
3711 4487 1.277842 TCTGAATGGCCGTTGCTCTAA 59.722 47.619 16.85 0.00 37.74 2.10
3712 4488 0.901827 TCTGAATGGCCGTTGCTCTA 59.098 50.000 16.85 0.00 37.74 2.43
3713 4489 0.036732 TTCTGAATGGCCGTTGCTCT 59.963 50.000 16.85 0.00 37.74 4.09
3714 4490 0.449388 CTTCTGAATGGCCGTTGCTC 59.551 55.000 16.85 0.77 37.74 4.26
3715 4491 0.036732 TCTTCTGAATGGCCGTTGCT 59.963 50.000 16.85 0.00 37.74 3.91
3716 4492 0.449388 CTCTTCTGAATGGCCGTTGC 59.551 55.000 16.85 7.53 0.00 4.17
3717 4493 2.099141 TCTCTTCTGAATGGCCGTTG 57.901 50.000 16.85 1.15 0.00 4.10
3718 4494 2.636830 CATCTCTTCTGAATGGCCGTT 58.363 47.619 10.83 10.83 0.00 4.44
3719 4495 1.745141 GCATCTCTTCTGAATGGCCGT 60.745 52.381 0.00 0.00 0.00 5.68
3720 4496 0.942962 GCATCTCTTCTGAATGGCCG 59.057 55.000 0.00 0.00 0.00 6.13
3721 4497 1.948145 CAGCATCTCTTCTGAATGGCC 59.052 52.381 0.00 0.00 32.26 5.36
3722 4498 1.334243 GCAGCATCTCTTCTGAATGGC 59.666 52.381 0.00 0.00 32.26 4.40
3723 4499 2.640184 TGCAGCATCTCTTCTGAATGG 58.360 47.619 0.00 0.00 32.26 3.16
3724 4500 3.487711 GCTTGCAGCATCTCTTCTGAATG 60.488 47.826 0.00 0.00 41.89 2.67
3725 4501 2.683867 GCTTGCAGCATCTCTTCTGAAT 59.316 45.455 0.00 0.00 41.89 2.57
3726 4502 2.082231 GCTTGCAGCATCTCTTCTGAA 58.918 47.619 0.00 0.00 41.89 3.02
3727 4503 1.678123 GGCTTGCAGCATCTCTTCTGA 60.678 52.381 0.00 0.00 44.75 3.27
3728 4504 0.733729 GGCTTGCAGCATCTCTTCTG 59.266 55.000 0.00 0.00 44.75 3.02
3729 4505 0.327259 TGGCTTGCAGCATCTCTTCT 59.673 50.000 0.00 0.00 44.75 2.85
3730 4506 1.135460 GTTGGCTTGCAGCATCTCTTC 60.135 52.381 0.00 0.00 44.75 2.87
3731 4507 0.886563 GTTGGCTTGCAGCATCTCTT 59.113 50.000 0.00 0.00 44.75 2.85
3732 4508 0.251033 TGTTGGCTTGCAGCATCTCT 60.251 50.000 0.00 0.00 44.75 3.10
3733 4509 0.599558 TTGTTGGCTTGCAGCATCTC 59.400 50.000 0.00 0.00 44.75 2.75
3734 4510 1.067142 CATTGTTGGCTTGCAGCATCT 60.067 47.619 0.00 0.00 44.75 2.90
3735 4511 1.067425 TCATTGTTGGCTTGCAGCATC 60.067 47.619 0.00 0.00 44.75 3.91
3736 4512 0.970640 TCATTGTTGGCTTGCAGCAT 59.029 45.000 0.00 0.00 44.75 3.79
3737 4513 0.032403 GTCATTGTTGGCTTGCAGCA 59.968 50.000 9.78 0.00 44.75 4.41
3738 4514 0.032403 TGTCATTGTTGGCTTGCAGC 59.968 50.000 0.11 0.11 41.46 5.25
3739 4515 1.338973 ACTGTCATTGTTGGCTTGCAG 59.661 47.619 0.00 0.00 0.00 4.41
3740 4516 1.067364 CACTGTCATTGTTGGCTTGCA 59.933 47.619 0.00 0.00 0.00 4.08
3741 4517 1.337703 TCACTGTCATTGTTGGCTTGC 59.662 47.619 0.00 0.00 0.00 4.01
3742 4518 3.713858 TTCACTGTCATTGTTGGCTTG 57.286 42.857 0.00 0.00 0.00 4.01
3743 4519 4.441913 CCTTTTCACTGTCATTGTTGGCTT 60.442 41.667 0.00 0.00 0.00 4.35
3744 4520 3.068590 CCTTTTCACTGTCATTGTTGGCT 59.931 43.478 0.00 0.00 0.00 4.75
3745 4521 3.383761 CCTTTTCACTGTCATTGTTGGC 58.616 45.455 0.00 0.00 0.00 4.52
3746 4522 3.383761 GCCTTTTCACTGTCATTGTTGG 58.616 45.455 0.00 0.00 0.00 3.77
3747 4523 3.181477 TGGCCTTTTCACTGTCATTGTTG 60.181 43.478 3.32 0.00 0.00 3.33
3748 4524 3.030291 TGGCCTTTTCACTGTCATTGTT 58.970 40.909 3.32 0.00 0.00 2.83
3749 4525 2.665165 TGGCCTTTTCACTGTCATTGT 58.335 42.857 3.32 0.00 0.00 2.71
3750 4526 3.731652 TTGGCCTTTTCACTGTCATTG 57.268 42.857 3.32 0.00 0.00 2.82
3751 4527 4.751767 TTTTGGCCTTTTCACTGTCATT 57.248 36.364 3.32 0.00 0.00 2.57
3752 4528 4.751767 TTTTTGGCCTTTTCACTGTCAT 57.248 36.364 3.32 0.00 0.00 3.06
3802 4578 9.887862 AAGGACATGATATATTGGAGGATTTTT 57.112 29.630 0.00 0.00 0.00 1.94
3803 4579 9.305555 CAAGGACATGATATATTGGAGGATTTT 57.694 33.333 0.00 0.00 0.00 1.82
3804 4580 8.672329 TCAAGGACATGATATATTGGAGGATTT 58.328 33.333 0.00 0.00 0.00 2.17
3805 4581 8.223378 TCAAGGACATGATATATTGGAGGATT 57.777 34.615 0.00 0.00 0.00 3.01
3806 4582 7.819521 TCAAGGACATGATATATTGGAGGAT 57.180 36.000 0.00 0.00 0.00 3.24
3807 4583 7.819521 ATCAAGGACATGATATATTGGAGGA 57.180 36.000 0.00 0.00 38.25 3.71
3816 4592 9.812347 TTGCCTTTATTATCAAGGACATGATAT 57.188 29.630 9.18 0.00 43.32 1.63
3817 4593 9.639563 TTTGCCTTTATTATCAAGGACATGATA 57.360 29.630 9.18 0.00 43.32 2.15
3818 4594 8.537728 TTTGCCTTTATTATCAAGGACATGAT 57.462 30.769 9.18 0.00 43.32 2.45
3819 4595 7.953005 TTTGCCTTTATTATCAAGGACATGA 57.047 32.000 9.18 0.00 43.32 3.07
3820 4596 8.415553 TCATTTGCCTTTATTATCAAGGACATG 58.584 33.333 9.18 7.16 43.32 3.21
3821 4597 8.537728 TCATTTGCCTTTATTATCAAGGACAT 57.462 30.769 9.18 0.00 43.32 3.06
3822 4598 7.953005 TCATTTGCCTTTATTATCAAGGACA 57.047 32.000 9.18 4.30 43.32 4.02
3823 4599 8.632679 TCATCATTTGCCTTTATTATCAAGGAC 58.367 33.333 9.18 1.99 43.32 3.85
3824 4600 8.765488 TCATCATTTGCCTTTATTATCAAGGA 57.235 30.769 9.18 0.00 43.32 3.36
3828 4604 9.299465 TGCTATCATCATTTGCCTTTATTATCA 57.701 29.630 0.00 0.00 0.00 2.15
3829 4605 9.565213 GTGCTATCATCATTTGCCTTTATTATC 57.435 33.333 0.00 0.00 0.00 1.75
3830 4606 9.305555 AGTGCTATCATCATTTGCCTTTATTAT 57.694 29.630 0.00 0.00 0.00 1.28
3831 4607 8.696043 AGTGCTATCATCATTTGCCTTTATTA 57.304 30.769 0.00 0.00 0.00 0.98
3832 4608 7.592885 AGTGCTATCATCATTTGCCTTTATT 57.407 32.000 0.00 0.00 0.00 1.40
3833 4609 7.592885 AAGTGCTATCATCATTTGCCTTTAT 57.407 32.000 0.00 0.00 0.00 1.40
3834 4610 7.093814 ACAAAGTGCTATCATCATTTGCCTTTA 60.094 33.333 0.00 0.00 31.71 1.85
3835 4611 5.927281 AAGTGCTATCATCATTTGCCTTT 57.073 34.783 0.00 0.00 0.00 3.11
3836 4612 5.186409 ACAAAGTGCTATCATCATTTGCCTT 59.814 36.000 0.00 0.00 31.71 4.35
3837 4613 4.708421 ACAAAGTGCTATCATCATTTGCCT 59.292 37.500 0.00 0.00 31.71 4.75
3838 4614 4.802039 CACAAAGTGCTATCATCATTTGCC 59.198 41.667 0.00 0.00 31.71 4.52
3839 4615 4.802039 CCACAAAGTGCTATCATCATTTGC 59.198 41.667 0.00 0.00 31.71 3.68
3840 4616 5.345702 CCCACAAAGTGCTATCATCATTTG 58.654 41.667 0.00 0.00 33.27 2.32
3841 4617 4.142093 GCCCACAAAGTGCTATCATCATTT 60.142 41.667 0.00 0.00 31.34 2.32
3842 4618 3.382546 GCCCACAAAGTGCTATCATCATT 59.617 43.478 0.00 0.00 31.34 2.57
3843 4619 2.954318 GCCCACAAAGTGCTATCATCAT 59.046 45.455 0.00 0.00 31.34 2.45
3844 4620 2.290832 TGCCCACAAAGTGCTATCATCA 60.291 45.455 0.00 0.00 31.34 3.07
3845 4621 2.357009 CTGCCCACAAAGTGCTATCATC 59.643 50.000 0.00 0.00 31.34 2.92
3846 4622 2.025981 TCTGCCCACAAAGTGCTATCAT 60.026 45.455 0.00 0.00 31.34 2.45
3847 4623 1.350684 TCTGCCCACAAAGTGCTATCA 59.649 47.619 0.00 0.00 31.34 2.15
3848 4624 1.740025 GTCTGCCCACAAAGTGCTATC 59.260 52.381 0.00 0.00 31.34 2.08
3849 4625 1.614317 GGTCTGCCCACAAAGTGCTAT 60.614 52.381 0.00 0.00 31.34 2.97
3850 4626 0.250727 GGTCTGCCCACAAAGTGCTA 60.251 55.000 0.00 0.00 31.34 3.49
3851 4627 1.529244 GGTCTGCCCACAAAGTGCT 60.529 57.895 0.00 0.00 31.34 4.40
3852 4628 1.518903 GAGGTCTGCCCACAAAGTGC 61.519 60.000 0.00 0.00 34.66 4.40
3853 4629 0.179020 TGAGGTCTGCCCACAAAGTG 60.179 55.000 0.00 0.00 34.66 3.16
3854 4630 0.550914 TTGAGGTCTGCCCACAAAGT 59.449 50.000 0.00 0.00 40.34 2.66
3855 4631 1.691196 TTTGAGGTCTGCCCACAAAG 58.309 50.000 0.00 0.00 45.32 2.77
3857 4633 1.619654 CATTTGAGGTCTGCCCACAA 58.380 50.000 0.00 0.00 41.38 3.33
3858 4634 0.251297 CCATTTGAGGTCTGCCCACA 60.251 55.000 0.00 0.00 34.66 4.17
3859 4635 0.251341 ACCATTTGAGGTCTGCCCAC 60.251 55.000 0.00 0.00 37.28 4.61
3860 4636 2.163454 ACCATTTGAGGTCTGCCCA 58.837 52.632 0.00 0.00 37.28 5.36
3867 4643 4.202503 ACTGAGAACATGACCATTTGAGGT 60.203 41.667 0.00 0.00 46.82 3.85
3868 4644 4.330250 ACTGAGAACATGACCATTTGAGG 58.670 43.478 0.00 0.00 0.00 3.86
3869 4645 5.954296 AACTGAGAACATGACCATTTGAG 57.046 39.130 0.00 0.00 0.00 3.02
3870 4646 7.815840 TTTAACTGAGAACATGACCATTTGA 57.184 32.000 0.00 0.00 0.00 2.69
3874 4650 9.466497 ACATATTTTAACTGAGAACATGACCAT 57.534 29.630 0.00 0.00 0.00 3.55
3875 4651 8.862325 ACATATTTTAACTGAGAACATGACCA 57.138 30.769 0.00 0.00 0.00 4.02
3876 4652 9.559958 CAACATATTTTAACTGAGAACATGACC 57.440 33.333 0.00 0.00 0.00 4.02
3879 4655 9.897744 ACACAACATATTTTAACTGAGAACATG 57.102 29.630 0.00 0.00 0.00 3.21
3882 4658 9.821662 GGTACACAACATATTTTAACTGAGAAC 57.178 33.333 0.00 0.00 0.00 3.01
3883 4659 9.787435 AGGTACACAACATATTTTAACTGAGAA 57.213 29.630 0.00 0.00 0.00 2.87
3884 4660 9.787435 AAGGTACACAACATATTTTAACTGAGA 57.213 29.630 0.00 0.00 0.00 3.27
3918 4694 4.763793 CAGGGTTTCTGAACATTCTGATGT 59.236 41.667 2.50 0.00 46.18 3.06
3919 4695 5.306532 CAGGGTTTCTGAACATTCTGATG 57.693 43.478 2.50 0.00 46.18 3.07
3931 4707 0.957395 ATGCGCACTCAGGGTTTCTG 60.957 55.000 14.90 0.00 44.68 3.02
3932 4708 0.957395 CATGCGCACTCAGGGTTTCT 60.957 55.000 14.90 0.00 0.00 2.52
3933 4709 1.237285 ACATGCGCACTCAGGGTTTC 61.237 55.000 14.90 0.00 0.00 2.78
3934 4710 1.228245 ACATGCGCACTCAGGGTTT 60.228 52.632 14.90 0.00 0.00 3.27
3935 4711 1.968017 CACATGCGCACTCAGGGTT 60.968 57.895 14.90 0.00 0.00 4.11
3936 4712 2.359107 CACATGCGCACTCAGGGT 60.359 61.111 14.90 1.00 0.00 4.34
3937 4713 2.359107 ACACATGCGCACTCAGGG 60.359 61.111 14.90 7.00 0.00 4.45
3938 4714 1.962822 ACACACATGCGCACTCAGG 60.963 57.895 14.90 5.31 0.00 3.86
3939 4715 1.205820 CACACACATGCGCACTCAG 59.794 57.895 14.90 5.75 0.00 3.35
3940 4716 1.523484 ACACACACATGCGCACTCA 60.523 52.632 14.90 0.00 0.00 3.41
3941 4717 1.082561 CACACACACATGCGCACTC 60.083 57.895 14.90 0.00 0.00 3.51
3942 4718 3.024784 CACACACACATGCGCACT 58.975 55.556 14.90 0.00 0.00 4.40
3943 4719 2.726912 GCACACACACATGCGCAC 60.727 61.111 14.90 0.00 30.97 5.34
3947 4723 2.726912 GCACGCACACACACATGC 60.727 61.111 0.00 0.00 38.52 4.06
3948 4724 2.425610 CGCACGCACACACACATG 60.426 61.111 0.00 0.00 0.00 3.21
3949 4725 2.894879 ACGCACGCACACACACAT 60.895 55.556 0.00 0.00 0.00 3.21
3950 4726 3.858989 CACGCACGCACACACACA 61.859 61.111 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.