Multiple sequence alignment - TraesCS5D01G500100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G500100 chr5D 100.000 5716 0 0 1 5716 528969576 528963861 0.000000e+00 10556.0
1 TraesCS5D01G500100 chr5D 95.699 93 4 0 2073 2165 476728870 476728962 3.570000e-32 150.0
2 TraesCS5D01G500100 chr5D 87.037 108 8 4 5165 5267 528946329 528946223 3.620000e-22 117.0
3 TraesCS5D01G500100 chr5B 96.293 2050 50 9 3057 5088 666190190 666188149 0.000000e+00 3341.0
4 TraesCS5D01G500100 chr5B 95.222 900 35 5 2163 3062 666191115 666190224 0.000000e+00 1417.0
5 TraesCS5D01G500100 chr5B 81.818 1067 85 49 444 1470 666192672 666191675 0.000000e+00 795.0
6 TraesCS5D01G500100 chr5B 86.418 589 49 13 1498 2082 666191674 666191113 2.930000e-172 616.0
7 TraesCS5D01G500100 chr5B 83.278 299 41 5 5418 5716 666187632 666187343 3.400000e-67 267.0
8 TraesCS5D01G500100 chr5B 87.611 226 18 4 5157 5379 666188148 666187930 2.640000e-63 254.0
9 TraesCS5D01G500100 chr5B 96.739 92 1 2 2080 2170 34550262 34550352 9.920000e-33 152.0
10 TraesCS5D01G500100 chr5B 78.571 210 37 7 5465 5672 221907559 221907356 1.290000e-26 132.0
11 TraesCS5D01G500100 chr5B 90.722 97 8 1 305 401 666193738 666193643 1.670000e-25 128.0
12 TraesCS5D01G500100 chr5B 83.117 77 11 1 5494 5570 705131635 705131709 1.030000e-07 69.4
13 TraesCS5D01G500100 chr5A 95.944 1997 71 7 3057 5047 657193771 657191779 0.000000e+00 3230.0
14 TraesCS5D01G500100 chr5A 91.135 925 64 13 2163 3073 657194714 657193794 0.000000e+00 1238.0
15 TraesCS5D01G500100 chr5A 81.196 1723 142 70 444 2082 657196336 657194712 0.000000e+00 1219.0
16 TraesCS5D01G500100 chr5A 84.028 432 35 15 1 401 657196855 657196427 8.980000e-103 385.0
17 TraesCS5D01G500100 chr5A 94.949 99 5 0 2068 2166 504574265 504574363 7.670000e-34 156.0
18 TraesCS5D01G500100 chr1D 93.312 1854 83 16 3057 4898 337214648 337216472 0.000000e+00 2699.0
19 TraesCS5D01G500100 chr1D 94.163 908 42 3 2163 3063 337213712 337214615 0.000000e+00 1373.0
20 TraesCS5D01G500100 chr1D 86.624 157 8 4 4904 5048 337216414 337216569 1.650000e-35 161.0
21 TraesCS5D01G500100 chr1D 93.220 59 4 0 2024 2082 337213656 337213714 2.840000e-13 87.9
22 TraesCS5D01G500100 chr1B 89.333 1125 64 15 3839 4960 452569713 452570784 0.000000e+00 1362.0
23 TraesCS5D01G500100 chr1B 93.275 922 42 5 2163 3070 452567733 452568648 0.000000e+00 1341.0
24 TraesCS5D01G500100 chr1B 93.575 607 27 6 3057 3654 452568674 452569277 0.000000e+00 894.0
25 TraesCS5D01G500100 chr1B 97.849 93 2 0 3678 3770 452569273 452569365 1.650000e-35 161.0
26 TraesCS5D01G500100 chr1B 86.713 143 14 4 4836 4975 452570721 452570861 2.760000e-33 154.0
27 TraesCS5D01G500100 chr1B 93.220 59 4 0 2024 2082 452567677 452567735 2.840000e-13 87.9
28 TraesCS5D01G500100 chr1B 100.000 40 0 0 3805 3844 452569365 452569404 2.210000e-09 75.0
29 TraesCS5D01G500100 chr1B 100.000 28 0 0 5494 5521 418829292 418829319 1.000000e-02 52.8
30 TraesCS5D01G500100 chr1A 93.103 464 19 3 2612 3070 435379011 435379466 0.000000e+00 667.0
31 TraesCS5D01G500100 chr1A 91.476 481 23 5 2163 2640 435378365 435378830 0.000000e+00 645.0
32 TraesCS5D01G500100 chr1A 86.207 174 11 6 3057 3218 435379492 435379664 5.890000e-40 176.0
33 TraesCS5D01G500100 chr1A 93.220 59 4 0 2024 2082 435378309 435378367 2.840000e-13 87.9
34 TraesCS5D01G500100 chr4A 83.503 394 55 6 3717 4103 616875015 616874625 5.450000e-95 359.0
35 TraesCS5D01G500100 chr4A 98.837 86 1 0 2080 2165 696211595 696211510 2.760000e-33 154.0
36 TraesCS5D01G500100 chr7A 100.000 86 0 0 2081 2166 409259612 409259527 5.930000e-35 159.0
37 TraesCS5D01G500100 chr7A 95.833 96 3 1 2074 2168 386395057 386394962 2.760000e-33 154.0
38 TraesCS5D01G500100 chr7A 95.833 96 2 2 2081 2175 512440420 512440326 2.760000e-33 154.0
39 TraesCS5D01G500100 chr7A 94.792 96 3 2 2081 2175 65537108 65537014 1.280000e-31 148.0
40 TraesCS5D01G500100 chr6D 100.000 85 0 0 2081 2165 144745028 144745112 2.130000e-34 158.0
41 TraesCS5D01G500100 chr6D 97.368 38 1 0 5539 5576 455533545 455533508 1.330000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G500100 chr5D 528963861 528969576 5715 True 10556.000000 10556 100.000000 1 5716 1 chr5D.!!$R2 5715
1 TraesCS5D01G500100 chr5B 666187343 666193738 6395 True 974.000000 3341 88.766000 305 5716 7 chr5B.!!$R2 5411
2 TraesCS5D01G500100 chr5A 657191779 657196855 5076 True 1518.000000 3230 88.075750 1 5047 4 chr5A.!!$R1 5046
3 TraesCS5D01G500100 chr1D 337213656 337216569 2913 False 1080.225000 2699 91.829750 2024 5048 4 chr1D.!!$F1 3024
4 TraesCS5D01G500100 chr1B 452567677 452570861 3184 False 582.128571 1362 93.423571 2024 4975 7 chr1B.!!$F2 2951
5 TraesCS5D01G500100 chr1A 435378309 435379664 1355 False 393.975000 667 91.001500 2024 3218 4 chr1A.!!$F1 1194

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
784 1806 0.172803 CGGGTCGGTCTTTCTGTAGG 59.827 60.0 0.00 0.0 0.00 3.18 F
1192 2235 0.315568 CTCGATCGGAATCTCCACCC 59.684 60.0 16.41 0.0 35.91 4.61 F
2095 3184 0.042131 ATTGTACTCCCTCCGTCCCA 59.958 55.0 0.00 0.0 0.00 4.37 F
2096 3185 0.178926 TTGTACTCCCTCCGTCCCAA 60.179 55.0 0.00 0.0 0.00 4.12 F
2763 4084 0.610232 AAGGCAATGACTGGACAGCC 60.610 55.0 0.00 0.0 42.31 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1697 2774 1.070914 GCATAGGTTAGCCTCCTCACC 59.929 57.143 0.0 0.0 45.64 4.02 R
2961 4294 0.676782 ATTCCGTCTTTGCTTCCCGG 60.677 55.000 0.0 0.0 39.98 5.73 R
3712 5155 4.359434 TGCCACACCTCATTTACACTAA 57.641 40.909 0.0 0.0 0.00 2.24 R
4181 5938 6.095720 ACGGATTTTCCAAAAGTGTTTCACTA 59.904 34.615 2.8 0.0 39.16 2.74 R
4766 6524 1.792757 ATGCTTGCCTTCCCTCCACA 61.793 55.000 0.0 0.0 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.420022 GCAACGGTGTATTCTGCATCTT 59.580 45.455 0.66 0.00 33.19 2.40
22 23 3.728864 GCAACGGTGTATTCTGCATCTTG 60.729 47.826 0.66 0.00 33.19 3.02
24 25 1.942657 CGGTGTATTCTGCATCTTGGG 59.057 52.381 0.00 0.00 0.00 4.12
140 156 5.887598 TCAGGTTGATAATTGGTCATTGGAG 59.112 40.000 0.00 0.00 0.00 3.86
141 157 5.068198 CAGGTTGATAATTGGTCATTGGAGG 59.932 44.000 0.00 0.00 0.00 4.30
142 158 4.202151 GGTTGATAATTGGTCATTGGAGGC 60.202 45.833 0.00 0.00 0.00 4.70
143 159 3.213506 TGATAATTGGTCATTGGAGGCG 58.786 45.455 0.00 0.00 0.00 5.52
145 161 0.611618 AATTGGTCATTGGAGGCGCA 60.612 50.000 10.83 0.00 0.00 6.09
146 162 1.315257 ATTGGTCATTGGAGGCGCAC 61.315 55.000 10.83 1.82 0.00 5.34
147 163 3.134127 GGTCATTGGAGGCGCACC 61.134 66.667 10.83 13.11 0.00 5.01
148 164 2.359850 GTCATTGGAGGCGCACCA 60.360 61.111 19.04 19.04 39.06 4.17
156 180 0.732538 GGAGGCGCACCAAAATTTCG 60.733 55.000 10.83 0.00 39.06 3.46
159 183 1.199097 AGGCGCACCAAAATTTCGTAG 59.801 47.619 10.83 0.00 39.06 3.51
160 184 1.613270 GCGCACCAAAATTTCGTAGG 58.387 50.000 0.30 0.00 0.00 3.18
207 232 1.968540 GCCACACTTGAGCCCTGTC 60.969 63.158 0.00 0.00 0.00 3.51
223 248 4.770795 CCCTGTCTGGATTATCGTTTTCT 58.229 43.478 0.00 0.00 38.35 2.52
236 261 8.821147 ATTATCGTTTTCTTTTTAAACACCCC 57.179 30.769 0.00 0.00 35.69 4.95
246 271 6.550481 TCTTTTTAAACACCCCCGTAAGAAAT 59.450 34.615 0.00 0.00 43.02 2.17
260 285 6.106673 CCGTAAGAAATACACATCTTGTCCT 58.893 40.000 0.00 0.00 38.81 3.85
265 290 4.537135 AATACACATCTTGTCCTGTCGT 57.463 40.909 0.00 0.00 39.91 4.34
269 294 3.945285 ACACATCTTGTCCTGTCGTTTTT 59.055 39.130 0.00 0.00 29.79 1.94
275 300 7.228706 ACATCTTGTCCTGTCGTTTTTATTTCT 59.771 33.333 0.00 0.00 0.00 2.52
278 303 6.295039 TGTCCTGTCGTTTTTATTTCTGAC 57.705 37.500 0.00 0.00 0.00 3.51
279 304 6.053005 TGTCCTGTCGTTTTTATTTCTGACT 58.947 36.000 0.00 0.00 0.00 3.41
287 312 8.690840 GTCGTTTTTATTTCTGACTGGAATTTG 58.309 33.333 0.00 0.00 0.00 2.32
291 316 7.765695 TTTATTTCTGACTGGAATTTGCTCT 57.234 32.000 0.00 0.00 0.00 4.09
295 320 3.071457 TCTGACTGGAATTTGCTCTGTGA 59.929 43.478 0.00 0.00 0.00 3.58
329 356 6.308371 ACAACTGTAAATTAAACACCTCCG 57.692 37.500 0.00 0.00 0.00 4.63
333 360 7.838771 ACTGTAAATTAAACACCTCCGTATC 57.161 36.000 0.00 0.00 0.00 2.24
337 364 9.064706 TGTAAATTAAACACCTCCGTATCAAAA 57.935 29.630 0.00 0.00 0.00 2.44
393 424 2.202837 GCGGGTAAGCCGGTGTAG 60.203 66.667 1.90 0.00 37.41 2.74
401 432 2.165319 AAGCCGGTGTAGAAGTGTTC 57.835 50.000 1.90 0.00 0.00 3.18
412 1349 4.600111 TGTAGAAGTGTTCCTTACCCCATT 59.400 41.667 0.00 0.00 32.03 3.16
414 1351 4.407365 AGAAGTGTTCCTTACCCCATTTG 58.593 43.478 0.00 0.00 32.03 2.32
422 1362 3.655777 TCCTTACCCCATTTGTCAGACTT 59.344 43.478 1.31 0.00 0.00 3.01
435 1375 2.423892 GTCAGACTTGGTCGCTAGATCA 59.576 50.000 0.00 0.00 37.67 2.92
436 1376 3.067461 GTCAGACTTGGTCGCTAGATCAT 59.933 47.826 0.00 0.00 37.34 2.45
449 1409 4.084849 CGCTAGATCATCTTTTGTAAGCCG 60.085 45.833 0.00 0.00 0.00 5.52
519 1479 5.007528 GCAACCAAACATGTTTGCTATTGTT 59.992 36.000 35.57 29.63 46.25 2.83
525 1485 7.148606 CCAAACATGTTTGCTATTGTTGTATGG 60.149 37.037 35.57 19.85 46.25 2.74
527 1487 5.480073 ACATGTTTGCTATTGTTGTATGGGT 59.520 36.000 0.00 0.00 0.00 4.51
562 1522 4.123497 TGCCAAGTACTGTATGTGCTAG 57.877 45.455 0.00 0.00 40.73 3.42
563 1523 3.513912 TGCCAAGTACTGTATGTGCTAGT 59.486 43.478 0.00 0.00 40.73 2.57
566 1526 5.344066 CCAAGTACTGTATGTGCTAGTCTG 58.656 45.833 0.00 0.00 40.73 3.51
623 1590 1.555075 TGCTGGAGAAGTGTATGGGTC 59.445 52.381 0.00 0.00 0.00 4.46
654 1659 3.297391 GCACCGGAATTTGCCAAAA 57.703 47.368 9.46 0.00 32.21 2.44
655 1660 1.807139 GCACCGGAATTTGCCAAAAT 58.193 45.000 9.46 0.00 37.61 1.82
656 1661 2.966050 GCACCGGAATTTGCCAAAATA 58.034 42.857 9.46 0.00 34.84 1.40
657 1662 3.530535 GCACCGGAATTTGCCAAAATAT 58.469 40.909 9.46 0.00 34.84 1.28
658 1663 3.309410 GCACCGGAATTTGCCAAAATATG 59.691 43.478 9.46 0.00 34.84 1.78
659 1664 4.753233 CACCGGAATTTGCCAAAATATGA 58.247 39.130 9.46 0.00 34.84 2.15
660 1665 4.566360 CACCGGAATTTGCCAAAATATGAC 59.434 41.667 9.46 0.00 34.84 3.06
661 1666 4.221703 ACCGGAATTTGCCAAAATATGACA 59.778 37.500 9.46 0.00 34.84 3.58
662 1667 4.566360 CCGGAATTTGCCAAAATATGACAC 59.434 41.667 0.00 0.00 34.84 3.67
663 1668 5.410067 CGGAATTTGCCAAAATATGACACT 58.590 37.500 0.00 0.00 34.84 3.55
664 1669 5.289193 CGGAATTTGCCAAAATATGACACTG 59.711 40.000 0.00 0.00 34.84 3.66
665 1670 5.063817 GGAATTTGCCAAAATATGACACTGC 59.936 40.000 0.00 0.00 34.84 4.40
666 1671 4.597404 TTTGCCAAAATATGACACTGCA 57.403 36.364 0.00 0.00 0.00 4.41
667 1672 4.804868 TTGCCAAAATATGACACTGCAT 57.195 36.364 0.00 0.00 0.00 3.96
668 1673 4.112716 TGCCAAAATATGACACTGCATG 57.887 40.909 0.00 0.00 0.00 4.06
669 1674 6.798057 ATTTGCCAAAATATGACACTGCATGT 60.798 34.615 0.00 2.02 38.07 3.21
670 1675 4.704057 TGCCAAAATATGACACTGCATGTA 59.296 37.500 0.00 0.00 43.56 2.29
671 1676 5.360429 TGCCAAAATATGACACTGCATGTAT 59.640 36.000 0.00 0.00 43.56 2.29
672 1677 5.916883 GCCAAAATATGACACTGCATGTATC 59.083 40.000 0.00 0.00 43.56 2.24
673 1678 6.441274 CCAAAATATGACACTGCATGTATCC 58.559 40.000 0.00 0.00 43.56 2.59
674 1679 6.039605 CCAAAATATGACACTGCATGTATCCA 59.960 38.462 0.00 0.00 43.56 3.41
675 1680 7.416551 CCAAAATATGACACTGCATGTATCCAA 60.417 37.037 0.00 0.00 43.56 3.53
676 1681 7.643569 AAATATGACACTGCATGTATCCAAA 57.356 32.000 0.00 0.00 43.56 3.28
702 1707 3.138798 ATGTCTCGGTCGGTCGGG 61.139 66.667 0.00 0.00 0.00 5.14
784 1806 0.172803 CGGGTCGGTCTTTCTGTAGG 59.827 60.000 0.00 0.00 0.00 3.18
787 1809 2.097825 GGTCGGTCTTTCTGTAGGCTA 58.902 52.381 0.00 0.00 0.00 3.93
839 1861 2.354003 CGCAATTTGAGGCCATTTCCTT 60.354 45.455 5.01 0.00 36.38 3.36
851 1873 2.095059 CCATTTCCTTTGCGACTCCAAG 60.095 50.000 0.00 0.00 0.00 3.61
855 1877 1.630244 CCTTTGCGACTCCAAGCGAG 61.630 60.000 0.00 0.00 44.95 5.03
903 1929 0.608130 TGACCATCTGACCGAACCAG 59.392 55.000 0.00 0.00 0.00 4.00
904 1930 0.895530 GACCATCTGACCGAACCAGA 59.104 55.000 0.00 0.00 43.84 3.86
905 1931 1.275291 GACCATCTGACCGAACCAGAA 59.725 52.381 0.00 0.00 43.07 3.02
906 1932 1.697432 ACCATCTGACCGAACCAGAAA 59.303 47.619 0.00 0.00 43.07 2.52
907 1933 2.076863 CCATCTGACCGAACCAGAAAC 58.923 52.381 0.00 0.00 43.07 2.78
908 1934 2.549992 CCATCTGACCGAACCAGAAACA 60.550 50.000 0.00 0.00 43.07 2.83
974 2000 4.508128 GCGGCGATCGAAGGTGGA 62.508 66.667 21.57 0.00 42.43 4.02
975 2001 2.278857 CGGCGATCGAAGGTGGAG 60.279 66.667 21.57 0.00 42.43 3.86
976 2002 2.107141 GGCGATCGAAGGTGGAGG 59.893 66.667 21.57 0.00 0.00 4.30
977 2003 2.722201 GGCGATCGAAGGTGGAGGT 61.722 63.158 21.57 0.00 0.00 3.85
978 2004 1.519455 GCGATCGAAGGTGGAGGTG 60.519 63.158 21.57 0.00 0.00 4.00
979 2005 1.141881 CGATCGAAGGTGGAGGTGG 59.858 63.158 10.26 0.00 0.00 4.61
980 2006 1.522569 GATCGAAGGTGGAGGTGGG 59.477 63.158 0.00 0.00 0.00 4.61
981 2007 1.972660 GATCGAAGGTGGAGGTGGGG 61.973 65.000 0.00 0.00 0.00 4.96
982 2008 3.717294 CGAAGGTGGAGGTGGGGG 61.717 72.222 0.00 0.00 0.00 5.40
983 2009 2.204090 GAAGGTGGAGGTGGGGGA 60.204 66.667 0.00 0.00 0.00 4.81
984 2010 1.619669 GAAGGTGGAGGTGGGGGAT 60.620 63.158 0.00 0.00 0.00 3.85
985 2011 1.151361 AAGGTGGAGGTGGGGGATT 60.151 57.895 0.00 0.00 0.00 3.01
986 2012 0.780090 AAGGTGGAGGTGGGGGATTT 60.780 55.000 0.00 0.00 0.00 2.17
987 2013 1.214992 AGGTGGAGGTGGGGGATTTC 61.215 60.000 0.00 0.00 0.00 2.17
988 2014 1.077716 GTGGAGGTGGGGGATTTCG 60.078 63.158 0.00 0.00 0.00 3.46
989 2015 1.540367 TGGAGGTGGGGGATTTCGT 60.540 57.895 0.00 0.00 0.00 3.85
990 2016 1.223763 GGAGGTGGGGGATTTCGTC 59.776 63.158 0.00 0.00 0.00 4.20
1163 2206 2.317378 CCCCCTTCCTCCCCCTTTC 61.317 68.421 0.00 0.00 0.00 2.62
1164 2207 2.680370 CCCCTTCCTCCCCCTTTCG 61.680 68.421 0.00 0.00 0.00 3.46
1165 2208 1.923909 CCCTTCCTCCCCCTTTCGT 60.924 63.158 0.00 0.00 0.00 3.85
1192 2235 0.315568 CTCGATCGGAATCTCCACCC 59.684 60.000 16.41 0.00 35.91 4.61
1224 2267 3.388676 TGATTGGATTGGATTGGATTGGC 59.611 43.478 0.00 0.00 0.00 4.52
1225 2268 1.792115 TGGATTGGATTGGATTGGCC 58.208 50.000 0.00 0.00 37.10 5.36
1227 2270 1.966354 GGATTGGATTGGATTGGCCTC 59.034 52.381 3.32 0.00 37.63 4.70
1228 2271 1.610522 GATTGGATTGGATTGGCCTCG 59.389 52.381 3.32 0.00 37.63 4.63
1229 2272 1.037030 TTGGATTGGATTGGCCTCGC 61.037 55.000 3.32 0.00 37.63 5.03
1230 2273 1.152881 GGATTGGATTGGCCTCGCT 60.153 57.895 3.32 0.00 37.63 4.93
1231 2274 1.169034 GGATTGGATTGGCCTCGCTC 61.169 60.000 3.32 0.00 37.63 5.03
1232 2275 0.464373 GATTGGATTGGCCTCGCTCA 60.464 55.000 3.32 0.00 37.63 4.26
1233 2276 0.749454 ATTGGATTGGCCTCGCTCAC 60.749 55.000 3.32 0.00 37.63 3.51
1325 2371 2.997897 AGAGTGGTGAGCCGTCCC 60.998 66.667 0.00 0.00 37.67 4.46
1338 2384 2.932234 CGTCCCTCTCGTGCACCTT 61.932 63.158 12.15 0.00 0.00 3.50
1350 2396 0.736053 TGCACCTTGTTTCCGTGTTC 59.264 50.000 0.00 0.00 0.00 3.18
1501 2574 8.443937 GTTTTCTTCAGTTGGTGATCAGTATAC 58.556 37.037 0.00 0.00 34.17 1.47
1527 2600 6.720309 TGTCAGGAATCCATTTTCTACATCA 58.280 36.000 0.61 0.00 0.00 3.07
1559 2633 6.878317 TGGTCTTGAGTATGTAAGAATCAGG 58.122 40.000 0.00 0.00 34.95 3.86
1565 2639 6.796426 TGAGTATGTAAGAATCAGGAACTCG 58.204 40.000 0.00 0.00 34.60 4.18
1569 2643 2.859165 AAGAATCAGGAACTCGGCAA 57.141 45.000 0.00 0.00 34.60 4.52
1571 2645 3.356529 AGAATCAGGAACTCGGCAAAT 57.643 42.857 0.00 0.00 34.60 2.32
1572 2646 4.487714 AGAATCAGGAACTCGGCAAATA 57.512 40.909 0.00 0.00 34.60 1.40
1610 2684 4.004982 TGGGATTACAACGAACCTTTAGC 58.995 43.478 0.00 0.00 0.00 3.09
1655 2729 9.265901 CGGTTCATATTGAGTAGATCTGAAATT 57.734 33.333 5.18 0.00 0.00 1.82
1658 2732 8.302965 TCATATTGAGTAGATCTGAAATTGCG 57.697 34.615 5.18 0.00 0.00 4.85
1669 2743 5.125100 TCTGAAATTGCGCTTTTGAGAAT 57.875 34.783 17.84 2.73 0.00 2.40
1682 2756 2.048444 TGAGAATGCTCTTCATGGCC 57.952 50.000 1.43 0.00 41.84 5.36
1683 2757 1.316651 GAGAATGCTCTTCATGGCCC 58.683 55.000 0.00 0.00 38.16 5.80
1687 2764 2.203126 GCTCTTCATGGCCCCTCG 60.203 66.667 0.00 0.00 0.00 4.63
1701 2778 3.686760 CTCGTCTGCAGAGGGTGA 58.313 61.111 30.36 18.56 32.38 4.02
1702 2779 1.510383 CTCGTCTGCAGAGGGTGAG 59.490 63.158 30.36 22.78 32.38 3.51
1704 2781 1.979155 CGTCTGCAGAGGGTGAGGA 60.979 63.158 25.34 0.00 0.00 3.71
1705 2782 1.896694 GTCTGCAGAGGGTGAGGAG 59.103 63.158 18.89 0.00 0.00 3.69
1708 2785 2.686835 GCAGAGGGTGAGGAGGCT 60.687 66.667 0.00 0.00 0.00 4.58
1709 2786 1.381872 GCAGAGGGTGAGGAGGCTA 60.382 63.158 0.00 0.00 0.00 3.93
1710 2787 0.978146 GCAGAGGGTGAGGAGGCTAA 60.978 60.000 0.00 0.00 0.00 3.09
1711 2788 0.827368 CAGAGGGTGAGGAGGCTAAC 59.173 60.000 0.00 0.00 0.00 2.34
1775 2852 6.920210 GCCAGAAAATTTTATAGGATGTGCTC 59.080 38.462 15.96 0.00 0.00 4.26
1795 2872 4.886489 GCTCCTTTTAATCTGCATCTCCTT 59.114 41.667 0.00 0.00 0.00 3.36
1802 2879 9.649167 CTTTTAATCTGCATCTCCTTTTCATTT 57.351 29.630 0.00 0.00 0.00 2.32
1833 2910 5.538118 CTTACGATTATGATGTGCTGGGTA 58.462 41.667 0.00 0.00 0.00 3.69
1913 2990 5.128827 GTCAGGAGTCCATCTTGTATTGGTA 59.871 44.000 12.86 0.00 36.43 3.25
1914 2991 5.363868 TCAGGAGTCCATCTTGTATTGGTAG 59.636 44.000 12.86 0.00 36.43 3.18
1919 2996 4.572389 GTCCATCTTGTATTGGTAGCTGTG 59.428 45.833 0.00 0.00 34.48 3.66
2017 3106 5.652452 CAGTTAATTTAGGAGGGGGTTCTTG 59.348 44.000 0.00 0.00 0.00 3.02
2089 3178 7.849160 AGTTTTTCTAGTATTGTACTCCCTCC 58.151 38.462 0.00 0.00 40.14 4.30
2090 3179 6.461110 TTTTCTAGTATTGTACTCCCTCCG 57.539 41.667 0.00 0.00 40.14 4.63
2091 3180 4.785346 TCTAGTATTGTACTCCCTCCGT 57.215 45.455 0.00 0.00 40.14 4.69
2092 3181 4.712476 TCTAGTATTGTACTCCCTCCGTC 58.288 47.826 0.00 0.00 40.14 4.79
2093 3182 2.664015 AGTATTGTACTCCCTCCGTCC 58.336 52.381 0.00 0.00 32.47 4.79
2094 3183 1.685517 GTATTGTACTCCCTCCGTCCC 59.314 57.143 0.00 0.00 0.00 4.46
2095 3184 0.042131 ATTGTACTCCCTCCGTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
2096 3185 0.178926 TTGTACTCCCTCCGTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
2097 3186 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
2098 3187 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
2099 3188 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
2100 3189 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2101 3190 2.488836 ACTCCCTCCGTCCCAAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
2102 3191 3.660959 ACTCCCTCCGTCCCAAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
2103 3192 4.042174 ACTCCCTCCGTCCCAAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
2104 3193 4.102681 ACTCCCTCCGTCCCAAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
2105 3194 4.300345 TCCCTCCGTCCCAAAATATAAGA 58.700 43.478 0.00 0.00 0.00 2.10
2106 3195 4.722781 TCCCTCCGTCCCAAAATATAAGAA 59.277 41.667 0.00 0.00 0.00 2.52
2107 3196 4.820173 CCCTCCGTCCCAAAATATAAGAAC 59.180 45.833 0.00 0.00 0.00 3.01
2108 3197 4.510340 CCTCCGTCCCAAAATATAAGAACG 59.490 45.833 0.00 0.00 0.00 3.95
2109 3198 5.088680 TCCGTCCCAAAATATAAGAACGT 57.911 39.130 0.00 0.00 0.00 3.99
2110 3199 5.490159 TCCGTCCCAAAATATAAGAACGTT 58.510 37.500 0.00 0.00 0.00 3.99
2111 3200 5.939296 TCCGTCCCAAAATATAAGAACGTTT 59.061 36.000 0.46 0.00 0.00 3.60
2112 3201 6.430616 TCCGTCCCAAAATATAAGAACGTTTT 59.569 34.615 0.46 0.00 0.00 2.43
2113 3202 7.040548 TCCGTCCCAAAATATAAGAACGTTTTT 60.041 33.333 9.22 9.22 0.00 1.94
2151 3240 9.458374 AGTGTCAAAAACGTTCTTATATTTTGG 57.542 29.630 15.53 0.00 39.94 3.28
2152 3241 8.696175 GTGTCAAAAACGTTCTTATATTTTGGG 58.304 33.333 15.53 0.00 39.94 4.12
2153 3242 8.630917 TGTCAAAAACGTTCTTATATTTTGGGA 58.369 29.630 15.53 4.35 39.94 4.37
2154 3243 8.908678 GTCAAAAACGTTCTTATATTTTGGGAC 58.091 33.333 15.53 7.20 39.94 4.46
2155 3244 8.630917 TCAAAAACGTTCTTATATTTTGGGACA 58.369 29.630 15.53 0.00 39.94 4.02
2156 3245 8.911662 CAAAAACGTTCTTATATTTTGGGACAG 58.088 33.333 0.00 0.00 42.39 3.51
2157 3246 7.989416 AAACGTTCTTATATTTTGGGACAGA 57.011 32.000 0.00 0.00 42.39 3.41
2158 3247 7.611213 AACGTTCTTATATTTTGGGACAGAG 57.389 36.000 0.00 0.00 42.39 3.35
2159 3248 6.113411 ACGTTCTTATATTTTGGGACAGAGG 58.887 40.000 0.00 0.00 42.39 3.69
2160 3249 5.527582 CGTTCTTATATTTTGGGACAGAGGG 59.472 44.000 0.00 0.00 42.39 4.30
2161 3250 6.631766 CGTTCTTATATTTTGGGACAGAGGGA 60.632 42.308 0.00 0.00 42.39 4.20
2162 3251 6.500589 TCTTATATTTTGGGACAGAGGGAG 57.499 41.667 0.00 0.00 42.39 4.30
2163 3252 5.970640 TCTTATATTTTGGGACAGAGGGAGT 59.029 40.000 0.00 0.00 42.39 3.85
2164 3253 7.136885 TCTTATATTTTGGGACAGAGGGAGTA 58.863 38.462 0.00 0.00 42.39 2.59
2193 3282 3.499338 ACATTCAGAACCATTCAAGCCA 58.501 40.909 0.00 0.00 0.00 4.75
2482 3583 5.600908 TTTAGGTTCGTAAACTGATGCAC 57.399 39.130 0.00 0.00 35.61 4.57
2486 3587 3.252458 GGTTCGTAAACTGATGCACCTTT 59.748 43.478 0.00 0.00 35.61 3.11
2498 3599 5.565509 TGATGCACCTTTTATCTAACCACA 58.434 37.500 0.00 0.00 0.00 4.17
2562 3667 6.073222 ACACTGTTCCATCTACATCGAAAAAC 60.073 38.462 0.00 0.00 0.00 2.43
2580 3685 2.283145 ACTTGCAGCTCCAATTCACT 57.717 45.000 0.00 0.00 0.00 3.41
2763 4084 0.610232 AAGGCAATGACTGGACAGCC 60.610 55.000 0.00 0.00 42.31 4.85
2844 4165 1.133407 GACGTGTTTGTTGGCCTTGAA 59.867 47.619 3.32 0.00 0.00 2.69
2961 4294 5.813672 TGGTTGTTATAATGGCGTAAGAGTC 59.186 40.000 0.00 0.00 43.02 3.36
2973 4306 2.347731 GTAAGAGTCCGGGAAGCAAAG 58.652 52.381 0.00 0.00 0.00 2.77
2976 4309 1.004918 AGTCCGGGAAGCAAAGACG 60.005 57.895 0.00 0.00 32.70 4.18
3126 4535 6.830324 TCCTTGCTGCAATCTAGATTTGTTAT 59.170 34.615 16.38 0.00 0.00 1.89
3682 5125 6.015095 TGCATATATGTGTAGGAGTTCCTCAG 60.015 42.308 14.14 0.00 44.77 3.35
3770 5213 6.662755 TGATAGTGGTGGCTCAGAAAATATT 58.337 36.000 0.00 0.00 0.00 1.28
4023 5780 6.937465 ACAGAAAAGGAGAAGGTATTCACTTC 59.063 38.462 0.00 0.00 43.56 3.01
4093 5850 2.639839 AGTTGCAACCTAGACCATCTGT 59.360 45.455 25.62 0.00 0.00 3.41
4098 5855 4.530553 TGCAACCTAGACCATCTGTTCTTA 59.469 41.667 0.00 0.00 0.00 2.10
4550 6307 2.042762 CCAGGTCCAGATCCCCCA 59.957 66.667 0.00 0.00 0.00 4.96
4583 6340 1.679977 GCAAGATCTTGGGGCTGCA 60.680 57.895 31.41 0.00 40.74 4.41
4707 6464 2.039084 GCTCAGAAGAGGAAGAAACCCA 59.961 50.000 0.00 0.00 42.33 4.51
4774 6532 6.617782 ATTGTGAGATATAGATGTGGAGGG 57.382 41.667 0.00 0.00 0.00 4.30
4779 6537 4.100373 AGATATAGATGTGGAGGGAAGGC 58.900 47.826 0.00 0.00 0.00 4.35
4870 6628 0.446222 TCAAGCCGTTTTATCTGCGC 59.554 50.000 0.00 0.00 0.00 6.09
5033 6854 4.081031 TGGGCGTGTTAGGTATTGTCAATA 60.081 41.667 0.89 0.89 0.00 1.90
5068 6889 3.069872 TGCAGAACCAAATGAATTGTGCT 59.930 39.130 15.38 0.00 37.86 4.40
5072 6893 4.099881 AGAACCAAATGAATTGTGCTGTGT 59.900 37.500 0.00 0.00 37.32 3.72
5088 6909 3.854784 GCTGTGTTGCCAAATTCAGACTC 60.855 47.826 8.32 0.00 0.00 3.36
5089 6910 2.622942 TGTGTTGCCAAATTCAGACTCC 59.377 45.455 0.00 0.00 0.00 3.85
5090 6911 2.622942 GTGTTGCCAAATTCAGACTCCA 59.377 45.455 0.00 0.00 0.00 3.86
5092 6913 4.458989 GTGTTGCCAAATTCAGACTCCATA 59.541 41.667 0.00 0.00 0.00 2.74
5093 6914 4.458989 TGTTGCCAAATTCAGACTCCATAC 59.541 41.667 0.00 0.00 0.00 2.39
5096 6917 3.879892 GCCAAATTCAGACTCCATACTCC 59.120 47.826 0.00 0.00 0.00 3.85
5097 6918 4.626287 GCCAAATTCAGACTCCATACTCCA 60.626 45.833 0.00 0.00 0.00 3.86
5098 6919 5.500234 CCAAATTCAGACTCCATACTCCAA 58.500 41.667 0.00 0.00 0.00 3.53
5099 6920 5.945784 CCAAATTCAGACTCCATACTCCAAA 59.054 40.000 0.00 0.00 0.00 3.28
5100 6921 6.127897 CCAAATTCAGACTCCATACTCCAAAC 60.128 42.308 0.00 0.00 0.00 2.93
5101 6922 5.762179 ATTCAGACTCCATACTCCAAACA 57.238 39.130 0.00 0.00 0.00 2.83
5102 6923 5.762179 TTCAGACTCCATACTCCAAACAT 57.238 39.130 0.00 0.00 0.00 2.71
5103 6924 5.762179 TCAGACTCCATACTCCAAACATT 57.238 39.130 0.00 0.00 0.00 2.71
5104 6925 6.126863 TCAGACTCCATACTCCAAACATTT 57.873 37.500 0.00 0.00 0.00 2.32
5105 6926 5.939883 TCAGACTCCATACTCCAAACATTTG 59.060 40.000 0.00 0.00 37.90 2.32
5106 6927 5.707298 CAGACTCCATACTCCAAACATTTGT 59.293 40.000 3.79 0.00 36.45 2.83
5107 6928 6.207417 CAGACTCCATACTCCAAACATTTGTT 59.793 38.462 3.79 0.00 40.50 2.83
5108 6929 6.207417 AGACTCCATACTCCAAACATTTGTTG 59.793 38.462 3.79 0.00 38.44 3.33
5109 6930 5.243730 ACTCCATACTCCAAACATTTGTTGG 59.756 40.000 3.79 0.00 38.44 3.77
5110 6931 5.389520 TCCATACTCCAAACATTTGTTGGA 58.610 37.500 5.80 5.80 38.44 3.53
5111 6932 6.015918 TCCATACTCCAAACATTTGTTGGAT 58.984 36.000 6.36 1.20 38.44 3.41
5112 6933 6.152661 TCCATACTCCAAACATTTGTTGGATC 59.847 38.462 6.36 0.00 38.44 3.36
5113 6934 6.071447 CCATACTCCAAACATTTGTTGGATCA 60.071 38.462 6.36 0.00 38.44 2.92
5114 6935 5.867903 ACTCCAAACATTTGTTGGATCAA 57.132 34.783 6.36 0.00 38.44 2.57
5115 6936 6.232581 ACTCCAAACATTTGTTGGATCAAA 57.767 33.333 6.36 0.00 40.74 2.69
5116 6937 6.648192 ACTCCAAACATTTGTTGGATCAAAA 58.352 32.000 6.36 0.00 40.05 2.44
5117 6938 6.762661 ACTCCAAACATTTGTTGGATCAAAAG 59.237 34.615 6.36 0.00 40.05 2.27
5118 6939 6.648192 TCCAAACATTTGTTGGATCAAAAGT 58.352 32.000 1.75 0.00 39.68 2.66
5119 6940 7.108847 TCCAAACATTTGTTGGATCAAAAGTT 58.891 30.769 1.75 6.86 44.93 2.66
5120 6941 7.065563 TCCAAACATTTGTTGGATCAAAAGTTG 59.934 33.333 11.48 8.56 43.45 3.16
5121 6942 5.989551 ACATTTGTTGGATCAAAAGTTGC 57.010 34.783 0.00 0.00 40.05 4.17
5122 6943 5.426504 ACATTTGTTGGATCAAAAGTTGCA 58.573 33.333 0.00 0.00 40.05 4.08
5123 6944 5.879223 ACATTTGTTGGATCAAAAGTTGCAA 59.121 32.000 0.00 0.00 40.05 4.08
5124 6945 6.373774 ACATTTGTTGGATCAAAAGTTGCAAA 59.626 30.769 0.00 0.00 40.05 3.68
5125 6946 6.175712 TTTGTTGGATCAAAAGTTGCAAAC 57.824 33.333 0.00 0.00 38.48 2.93
5126 6947 5.163913 TTTGTTGGATCAAAAGTTGCAAACG 60.164 36.000 0.00 0.00 40.80 3.60
5127 6948 7.286017 TTTGTTGGATCAAAAGTTGCAAACGA 61.286 34.615 0.00 0.00 40.80 3.85
5128 6949 8.991386 TTTGTTGGATCAAAAGTTGCAAACGAG 61.991 37.037 0.00 0.00 40.80 4.18
5143 6964 3.735029 GAGCGACGGACGGACACT 61.735 66.667 1.66 0.00 42.83 3.55
5144 6965 3.264866 GAGCGACGGACGGACACTT 62.265 63.158 1.66 0.00 42.83 3.16
5145 6966 2.804090 GCGACGGACGGACACTTC 60.804 66.667 1.66 0.00 42.83 3.01
5146 6967 2.952245 CGACGGACGGACACTTCT 59.048 61.111 0.00 0.00 38.46 2.85
5147 6968 1.442184 CGACGGACGGACACTTCTG 60.442 63.158 0.00 0.00 38.46 3.02
5148 6969 1.658673 GACGGACGGACACTTCTGT 59.341 57.895 0.00 0.00 44.67 3.41
5149 6970 0.031721 GACGGACGGACACTTCTGTT 59.968 55.000 0.00 0.00 41.81 3.16
5150 6971 0.249322 ACGGACGGACACTTCTGTTG 60.249 55.000 0.00 0.00 41.81 3.33
5151 6972 0.249322 CGGACGGACACTTCTGTTGT 60.249 55.000 0.00 0.00 41.81 3.32
5152 6973 1.217882 GGACGGACACTTCTGTTGTG 58.782 55.000 0.00 0.00 41.81 3.33
5153 6974 1.202486 GGACGGACACTTCTGTTGTGA 60.202 52.381 9.04 0.00 41.81 3.58
5154 6975 2.548067 GGACGGACACTTCTGTTGTGAT 60.548 50.000 9.04 0.00 41.81 3.06
5155 6976 2.476619 GACGGACACTTCTGTTGTGATG 59.523 50.000 9.04 0.00 41.81 3.07
5156 6977 2.158957 ACGGACACTTCTGTTGTGATGT 60.159 45.455 9.04 0.00 38.26 3.06
5157 6978 3.069016 ACGGACACTTCTGTTGTGATGTA 59.931 43.478 9.04 0.00 38.26 2.29
5158 6979 3.428870 CGGACACTTCTGTTGTGATGTAC 59.571 47.826 9.04 0.00 38.65 2.90
5159 6980 3.746492 GGACACTTCTGTTGTGATGTACC 59.254 47.826 9.04 0.00 38.65 3.34
5160 6981 3.740115 ACACTTCTGTTGTGATGTACCC 58.260 45.455 9.04 0.00 38.65 3.69
5161 6982 3.391296 ACACTTCTGTTGTGATGTACCCT 59.609 43.478 9.04 0.00 38.65 4.34
5162 6983 4.591498 ACACTTCTGTTGTGATGTACCCTA 59.409 41.667 9.04 0.00 38.65 3.53
5163 6984 4.929808 CACTTCTGTTGTGATGTACCCTAC 59.070 45.833 0.00 0.00 37.60 3.18
5164 6985 4.591498 ACTTCTGTTGTGATGTACCCTACA 59.409 41.667 0.00 0.00 43.80 2.74
5165 6986 4.801330 TCTGTTGTGATGTACCCTACAG 57.199 45.455 0.00 0.00 42.77 2.74
5166 6987 3.513912 TCTGTTGTGATGTACCCTACAGG 59.486 47.826 0.00 0.00 42.77 4.00
5183 7004 4.935352 ACAGGTTTTACCACGTAGTACA 57.065 40.909 0.38 0.00 41.61 2.90
5185 7006 5.232463 ACAGGTTTTACCACGTAGTACATG 58.768 41.667 0.38 0.00 41.61 3.21
5193 7014 5.155278 ACCACGTAGTACATGATTTTCCA 57.845 39.130 0.00 0.00 41.61 3.53
5218 7039 6.695278 AGATGTTTAAACAAAATGTGACCACG 59.305 34.615 23.97 0.00 43.03 4.94
5251 7072 1.530441 CGTGATTTTCTGCCTGATGCG 60.530 52.381 0.00 0.00 45.60 4.73
5264 7086 1.857217 CTGATGCGCACTGATGTACTC 59.143 52.381 14.90 3.03 0.00 2.59
5272 7094 0.818296 ACTGATGTACTCACCCGAGC 59.182 55.000 0.00 0.00 43.66 5.03
5295 7117 2.985847 GCCTTGCCACTCCACCAC 60.986 66.667 0.00 0.00 0.00 4.16
5303 7125 1.577328 CCACTCCACCACGAATGCAC 61.577 60.000 0.00 0.00 0.00 4.57
5312 7134 1.130373 CCACGAATGCACCATACACAC 59.870 52.381 0.00 0.00 0.00 3.82
5330 7152 2.443255 ACACCCCATGGATCAGATTACC 59.557 50.000 15.22 0.00 34.81 2.85
5336 7158 3.576118 CCATGGATCAGATTACCTCTCGT 59.424 47.826 5.56 0.00 29.16 4.18
5337 7159 4.321601 CCATGGATCAGATTACCTCTCGTC 60.322 50.000 5.56 0.00 29.16 4.20
5339 7161 2.226912 GGATCAGATTACCTCTCGTCCG 59.773 54.545 0.00 0.00 29.51 4.79
5340 7162 2.414994 TCAGATTACCTCTCGTCCGT 57.585 50.000 0.00 0.00 29.16 4.69
5341 7163 2.014857 TCAGATTACCTCTCGTCCGTG 58.985 52.381 0.00 0.00 29.16 4.94
5342 7164 0.739561 AGATTACCTCTCGTCCGTGC 59.260 55.000 0.00 0.00 0.00 5.34
5343 7165 0.454600 GATTACCTCTCGTCCGTGCA 59.545 55.000 0.00 0.00 0.00 4.57
5344 7166 1.067212 GATTACCTCTCGTCCGTGCAT 59.933 52.381 0.00 0.00 0.00 3.96
5345 7167 1.753930 TTACCTCTCGTCCGTGCATA 58.246 50.000 0.00 0.00 0.00 3.14
5346 7168 1.019673 TACCTCTCGTCCGTGCATAC 58.980 55.000 0.00 0.00 0.00 2.39
5347 7169 1.065928 CCTCTCGTCCGTGCATACC 59.934 63.158 0.00 0.00 0.00 2.73
5372 7194 1.861982 CCGAAGTAGAAAGAGGGGGA 58.138 55.000 0.00 0.00 0.00 4.81
5373 7195 2.399580 CCGAAGTAGAAAGAGGGGGAT 58.600 52.381 0.00 0.00 0.00 3.85
5379 7201 4.757692 AGTAGAAAGAGGGGGATAGATGG 58.242 47.826 0.00 0.00 0.00 3.51
5380 7202 4.423960 AGTAGAAAGAGGGGGATAGATGGA 59.576 45.833 0.00 0.00 0.00 3.41
5381 7203 4.516953 AGAAAGAGGGGGATAGATGGAT 57.483 45.455 0.00 0.00 0.00 3.41
5383 7205 5.598754 AGAAAGAGGGGGATAGATGGATAG 58.401 45.833 0.00 0.00 0.00 2.08
5384 7206 3.413105 AGAGGGGGATAGATGGATAGC 57.587 52.381 0.00 0.00 0.00 2.97
5385 7207 2.939340 AGAGGGGGATAGATGGATAGCT 59.061 50.000 0.00 0.00 0.00 3.32
5386 7208 4.130691 AGAGGGGGATAGATGGATAGCTA 58.869 47.826 0.00 0.00 0.00 3.32
5387 7209 4.550317 AGAGGGGGATAGATGGATAGCTAA 59.450 45.833 0.00 0.00 0.00 3.09
5388 7210 4.889780 AGGGGGATAGATGGATAGCTAAG 58.110 47.826 0.00 0.00 0.00 2.18
5390 7212 5.017866 AGGGGGATAGATGGATAGCTAAGAA 59.982 44.000 0.00 0.00 0.00 2.52
5391 7213 5.129650 GGGGGATAGATGGATAGCTAAGAAC 59.870 48.000 0.00 0.00 0.00 3.01
5392 7214 5.961421 GGGGATAGATGGATAGCTAAGAACT 59.039 44.000 0.00 0.00 0.00 3.01
5393 7215 6.442244 GGGGATAGATGGATAGCTAAGAACTT 59.558 42.308 0.00 0.00 0.00 2.66
5394 7216 7.037945 GGGGATAGATGGATAGCTAAGAACTTT 60.038 40.741 0.00 0.00 0.00 2.66
5395 7217 7.821846 GGGATAGATGGATAGCTAAGAACTTTG 59.178 40.741 0.00 0.00 0.00 2.77
5396 7218 8.371699 GGATAGATGGATAGCTAAGAACTTTGT 58.628 37.037 0.00 0.00 0.00 2.83
5397 7219 9.418045 GATAGATGGATAGCTAAGAACTTTGTC 57.582 37.037 0.00 0.00 0.00 3.18
5399 7221 7.624549 AGATGGATAGCTAAGAACTTTGTCAA 58.375 34.615 0.00 0.00 0.00 3.18
5400 7222 8.103305 AGATGGATAGCTAAGAACTTTGTCAAA 58.897 33.333 0.00 0.00 0.00 2.69
5401 7223 8.635765 ATGGATAGCTAAGAACTTTGTCAAAA 57.364 30.769 0.00 0.00 0.00 2.44
5402 7224 8.458573 TGGATAGCTAAGAACTTTGTCAAAAA 57.541 30.769 0.00 0.00 0.00 1.94
5431 7512 3.382803 ATCTGCAGCCTCACGCCTC 62.383 63.158 9.47 0.00 38.78 4.70
5433 7514 3.889134 CTGCAGCCTCACGCCTCAA 62.889 63.158 0.00 0.00 38.78 3.02
5436 7517 1.302033 CAGCCTCACGCCTCAAACT 60.302 57.895 0.00 0.00 38.78 2.66
5438 7519 2.328099 GCCTCACGCCTCAAACTGG 61.328 63.158 0.00 0.00 0.00 4.00
5442 7523 0.033504 TCACGCCTCAAACTGGACTC 59.966 55.000 0.00 0.00 0.00 3.36
5452 7533 0.179094 AACTGGACTCAAACGCACGA 60.179 50.000 0.00 0.00 0.00 4.35
5478 7559 1.985895 AGGATCCCGGTCAAAAGAACT 59.014 47.619 8.55 0.00 0.00 3.01
5479 7560 2.027100 AGGATCCCGGTCAAAAGAACTC 60.027 50.000 8.55 0.00 0.00 3.01
5480 7561 2.000447 GATCCCGGTCAAAAGAACTCG 59.000 52.381 0.00 0.00 0.00 4.18
5487 7568 2.742589 GGTCAAAAGAACTCGACCCATC 59.257 50.000 0.00 0.00 41.77 3.51
5488 7569 2.742589 GTCAAAAGAACTCGACCCATCC 59.257 50.000 0.00 0.00 0.00 3.51
5489 7570 1.732259 CAAAAGAACTCGACCCATCCG 59.268 52.381 0.00 0.00 0.00 4.18
5492 7573 0.397254 AGAACTCGACCCATCCGGAT 60.397 55.000 12.38 12.38 34.64 4.18
5515 7596 0.106335 TCAAACCGGCCTCAAACGTA 59.894 50.000 0.00 0.00 0.00 3.57
5518 7599 2.086251 AACCGGCCTCAAACGTACGA 62.086 55.000 24.41 0.00 0.00 3.43
5534 7615 3.655481 GAACTGTTCGGCACCCAG 58.345 61.111 4.57 0.00 0.00 4.45
5539 7620 2.045926 GTTCGGCACCCAGCTCAT 60.046 61.111 0.00 0.00 44.79 2.90
5543 7624 1.302033 CGGCACCCAGCTCATATCC 60.302 63.158 0.00 0.00 44.79 2.59
5553 7634 3.245016 CCAGCTCATATCCAGCCCAAATA 60.245 47.826 0.29 0.00 37.63 1.40
5559 7640 6.718593 TCATATCCAGCCCAAATATAAGGT 57.281 37.500 0.00 0.00 0.00 3.50
5575 7656 2.032681 GTGGATATGAGGCGGCCC 59.967 66.667 17.02 8.02 0.00 5.80
5576 7657 2.122413 TGGATATGAGGCGGCCCT 60.122 61.111 17.02 2.62 46.74 5.19
5577 7658 1.157513 TGGATATGAGGCGGCCCTA 59.842 57.895 17.02 5.19 43.12 3.53
5578 7659 0.252696 TGGATATGAGGCGGCCCTAT 60.253 55.000 17.02 12.89 43.12 2.57
5580 7661 0.103208 GATATGAGGCGGCCCTATCG 59.897 60.000 17.02 0.00 43.12 2.92
5582 7663 1.532604 TATGAGGCGGCCCTATCGTG 61.533 60.000 17.02 0.00 43.12 4.35
5589 7670 3.845259 GCCCTATCGTGTCCGCCA 61.845 66.667 0.00 0.00 0.00 5.69
5590 7671 2.106332 CCCTATCGTGTCCGCCAC 59.894 66.667 0.00 0.00 40.89 5.01
5604 7685 3.697747 CCACGTCCGCCTAACCCA 61.698 66.667 0.00 0.00 0.00 4.51
5605 7686 2.582436 CACGTCCGCCTAACCCAT 59.418 61.111 0.00 0.00 0.00 4.00
5606 7687 1.520787 CACGTCCGCCTAACCCATC 60.521 63.158 0.00 0.00 0.00 3.51
5641 7722 0.472734 CCCCACAAAAACCCCATCCA 60.473 55.000 0.00 0.00 0.00 3.41
5645 7726 2.497273 CCACAAAAACCCCATCCAGATC 59.503 50.000 0.00 0.00 0.00 2.75
5646 7727 2.164219 CACAAAAACCCCATCCAGATCG 59.836 50.000 0.00 0.00 0.00 3.69
5649 7730 3.669939 AAAACCCCATCCAGATCGAAT 57.330 42.857 0.00 0.00 0.00 3.34
5655 7736 3.307059 CCCCATCCAGATCGAATCCTAAC 60.307 52.174 0.00 0.00 0.00 2.34
5679 7760 1.271102 ACTTCACTCTGCTTCGGTCTC 59.729 52.381 0.00 0.00 0.00 3.36
5680 7761 0.603569 TTCACTCTGCTTCGGTCTCC 59.396 55.000 0.00 0.00 0.00 3.71
5691 7772 2.776913 CGGTCTCCGCCTCTTCTCC 61.777 68.421 0.00 0.00 41.17 3.71
5709 7790 2.678336 CTCCAACCTTTCTCCAATACGC 59.322 50.000 0.00 0.00 0.00 4.42
5710 7791 1.743394 CCAACCTTTCTCCAATACGCC 59.257 52.381 0.00 0.00 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
96 111 7.979444 CCTGATAGGTTTAAGTTTGTCTGAA 57.021 36.000 0.00 0.00 0.00 3.02
132 148 0.825425 TTTTGGTGCGCCTCCAATGA 60.825 50.000 26.61 18.43 43.25 2.57
140 156 1.613270 CTACGAAATTTTGGTGCGCC 58.387 50.000 10.11 10.11 0.00 6.53
141 157 1.613270 CCTACGAAATTTTGGTGCGC 58.387 50.000 10.22 0.00 0.00 6.09
142 158 1.068885 TGCCTACGAAATTTTGGTGCG 60.069 47.619 10.22 2.75 0.00 5.34
143 159 2.595386 CTGCCTACGAAATTTTGGTGC 58.405 47.619 10.22 9.16 0.00 5.01
145 161 2.167662 CCCTGCCTACGAAATTTTGGT 58.832 47.619 10.22 5.83 0.00 3.67
146 162 1.135112 GCCCTGCCTACGAAATTTTGG 60.135 52.381 10.22 3.75 0.00 3.28
147 163 1.818674 AGCCCTGCCTACGAAATTTTG 59.181 47.619 3.73 3.73 0.00 2.44
148 164 2.215942 AGCCCTGCCTACGAAATTTT 57.784 45.000 0.00 0.00 0.00 1.82
149 165 2.640184 GTAGCCCTGCCTACGAAATTT 58.360 47.619 0.00 0.00 0.00 1.82
156 180 1.610554 TTGTCCGTAGCCCTGCCTAC 61.611 60.000 0.00 0.00 35.46 3.18
159 183 1.819632 CATTGTCCGTAGCCCTGCC 60.820 63.158 0.00 0.00 0.00 4.85
160 184 0.676782 AACATTGTCCGTAGCCCTGC 60.677 55.000 0.00 0.00 0.00 4.85
223 248 6.728089 ATTTCTTACGGGGGTGTTTAAAAA 57.272 33.333 0.00 0.00 0.00 1.94
236 261 6.036083 CAGGACAAGATGTGTATTTCTTACGG 59.964 42.308 0.00 0.00 41.96 4.02
246 271 4.330944 AAACGACAGGACAAGATGTGTA 57.669 40.909 0.00 0.00 41.96 2.90
260 285 6.928979 TTCCAGTCAGAAATAAAAACGACA 57.071 33.333 0.00 0.00 0.00 4.35
265 290 8.641541 AGAGCAAATTCCAGTCAGAAATAAAAA 58.358 29.630 0.00 0.00 0.00 1.94
269 294 6.149973 CACAGAGCAAATTCCAGTCAGAAATA 59.850 38.462 0.00 0.00 0.00 1.40
275 300 3.141398 GTCACAGAGCAAATTCCAGTCA 58.859 45.455 0.00 0.00 0.00 3.41
278 303 1.466167 CGGTCACAGAGCAAATTCCAG 59.534 52.381 0.00 0.00 0.00 3.86
279 304 1.522668 CGGTCACAGAGCAAATTCCA 58.477 50.000 0.00 0.00 0.00 3.53
287 312 1.381928 TATCGGACCGGTCACAGAGC 61.382 60.000 34.40 15.86 0.00 4.09
291 316 0.244450 GTTGTATCGGACCGGTCACA 59.756 55.000 34.40 26.05 0.00 3.58
295 320 1.838112 TACAGTTGTATCGGACCGGT 58.162 50.000 6.92 6.92 0.00 5.28
329 356 6.756542 GCTTGGGATGGTTGTAATTTTGATAC 59.243 38.462 0.00 0.00 0.00 2.24
333 360 3.925913 CGCTTGGGATGGTTGTAATTTTG 59.074 43.478 0.00 0.00 0.00 2.44
337 364 1.102978 GCGCTTGGGATGGTTGTAAT 58.897 50.000 0.00 0.00 0.00 1.89
363 390 1.315257 TACCCGCCTAACACTCGGTC 61.315 60.000 0.00 0.00 41.46 4.79
393 424 4.149598 ACAAATGGGGTAAGGAACACTTC 58.850 43.478 0.00 0.00 40.64 3.01
401 432 3.721087 AGTCTGACAAATGGGGTAAGG 57.279 47.619 10.88 0.00 0.00 2.69
412 1349 2.235891 TCTAGCGACCAAGTCTGACAA 58.764 47.619 10.88 0.00 0.00 3.18
414 1351 2.423892 TGATCTAGCGACCAAGTCTGAC 59.576 50.000 0.00 0.00 0.00 3.51
422 1362 4.471904 ACAAAAGATGATCTAGCGACCA 57.528 40.909 0.00 0.00 0.00 4.02
435 1375 1.904287 TGTGGCGGCTTACAAAAGAT 58.096 45.000 11.43 0.00 34.37 2.40
436 1376 1.681538 TTGTGGCGGCTTACAAAAGA 58.318 45.000 11.43 0.00 34.17 2.52
525 1485 0.530744 GGCAAATCCGGGAAAAGACC 59.469 55.000 0.00 0.00 0.00 3.85
527 1487 1.892474 CTTGGCAAATCCGGGAAAAGA 59.108 47.619 0.00 0.00 37.80 2.52
537 1497 4.396166 AGCACATACAGTACTTGGCAAATC 59.604 41.667 0.00 0.00 0.00 2.17
538 1498 4.335416 AGCACATACAGTACTTGGCAAAT 58.665 39.130 0.00 0.00 0.00 2.32
596 1563 3.045601 ACACTTCTCCAGCACATACAC 57.954 47.619 0.00 0.00 0.00 2.90
668 1673 2.423538 GACATGGGCACTGTTTGGATAC 59.576 50.000 0.00 0.00 0.00 2.24
669 1674 2.308570 AGACATGGGCACTGTTTGGATA 59.691 45.455 0.00 0.00 0.00 2.59
670 1675 1.076024 AGACATGGGCACTGTTTGGAT 59.924 47.619 0.00 0.00 0.00 3.41
671 1676 0.478072 AGACATGGGCACTGTTTGGA 59.522 50.000 0.00 0.00 0.00 3.53
672 1677 0.883833 GAGACATGGGCACTGTTTGG 59.116 55.000 0.00 0.00 0.00 3.28
673 1678 0.518636 CGAGACATGGGCACTGTTTG 59.481 55.000 0.00 0.00 0.00 2.93
674 1679 0.606401 CCGAGACATGGGCACTGTTT 60.606 55.000 0.00 0.00 0.00 2.83
675 1680 1.003355 CCGAGACATGGGCACTGTT 60.003 57.895 0.00 0.00 0.00 3.16
676 1681 2.172483 GACCGAGACATGGGCACTGT 62.172 60.000 0.00 0.00 33.37 3.55
702 1707 3.712881 GCCACTTGTCACGTCCGC 61.713 66.667 0.00 0.00 0.00 5.54
784 1806 1.749258 CAGGGCCGGAAAAGGTAGC 60.749 63.158 5.05 0.00 0.00 3.58
787 1809 2.115266 CACAGGGCCGGAAAAGGT 59.885 61.111 11.67 0.00 0.00 3.50
839 1861 2.738521 GCTCGCTTGGAGTCGCAA 60.739 61.111 0.00 0.00 45.03 4.85
886 1912 1.348064 TTCTGGTTCGGTCAGATGGT 58.652 50.000 0.00 0.00 40.46 3.55
960 1986 1.519455 CACCTCCACCTTCGATCGC 60.519 63.158 11.09 0.00 0.00 4.58
961 1987 1.141881 CCACCTCCACCTTCGATCG 59.858 63.158 9.36 9.36 0.00 3.69
962 1988 1.522569 CCCACCTCCACCTTCGATC 59.477 63.158 0.00 0.00 0.00 3.69
963 1989 1.995626 CCCCACCTCCACCTTCGAT 60.996 63.158 0.00 0.00 0.00 3.59
964 1990 2.606519 CCCCACCTCCACCTTCGA 60.607 66.667 0.00 0.00 0.00 3.71
965 1991 3.717294 CCCCCACCTCCACCTTCG 61.717 72.222 0.00 0.00 0.00 3.79
966 1992 1.214992 AATCCCCCACCTCCACCTTC 61.215 60.000 0.00 0.00 0.00 3.46
967 1993 0.780090 AAATCCCCCACCTCCACCTT 60.780 55.000 0.00 0.00 0.00 3.50
968 1994 1.151361 AAATCCCCCACCTCCACCT 60.151 57.895 0.00 0.00 0.00 4.00
969 1995 1.306633 GAAATCCCCCACCTCCACC 59.693 63.158 0.00 0.00 0.00 4.61
970 1996 1.077716 CGAAATCCCCCACCTCCAC 60.078 63.158 0.00 0.00 0.00 4.02
971 1997 1.540367 ACGAAATCCCCCACCTCCA 60.540 57.895 0.00 0.00 0.00 3.86
972 1998 1.223763 GACGAAATCCCCCACCTCC 59.776 63.158 0.00 0.00 0.00 4.30
973 1999 1.223763 GGACGAAATCCCCCACCTC 59.776 63.158 0.00 0.00 42.46 3.85
974 2000 2.666098 CGGACGAAATCCCCCACCT 61.666 63.158 0.00 0.00 46.04 4.00
975 2001 2.124860 CGGACGAAATCCCCCACC 60.125 66.667 0.00 0.00 46.04 4.61
976 2002 1.153429 CTCGGACGAAATCCCCCAC 60.153 63.158 0.00 0.00 46.04 4.61
977 2003 0.689745 ATCTCGGACGAAATCCCCCA 60.690 55.000 0.00 0.00 46.04 4.96
978 2004 0.033642 GATCTCGGACGAAATCCCCC 59.966 60.000 0.00 0.00 46.04 5.40
979 2005 0.750850 TGATCTCGGACGAAATCCCC 59.249 55.000 5.67 0.00 46.04 4.81
980 2006 1.681793 TCTGATCTCGGACGAAATCCC 59.318 52.381 5.67 0.00 46.04 3.85
981 2007 3.243569 ACATCTGATCTCGGACGAAATCC 60.244 47.826 5.67 0.00 45.20 3.01
982 2008 3.971150 ACATCTGATCTCGGACGAAATC 58.029 45.455 1.30 1.30 33.47 2.17
983 2009 3.549019 CGACATCTGATCTCGGACGAAAT 60.549 47.826 7.34 0.00 33.47 2.17
984 2010 2.223272 CGACATCTGATCTCGGACGAAA 60.223 50.000 7.34 0.00 33.47 3.46
985 2011 1.330829 CGACATCTGATCTCGGACGAA 59.669 52.381 7.34 0.00 33.47 3.85
986 2012 0.938008 CGACATCTGATCTCGGACGA 59.062 55.000 7.34 0.00 33.47 4.20
987 2013 0.658829 GCGACATCTGATCTCGGACG 60.659 60.000 15.40 5.58 33.47 4.79
988 2014 0.382158 TGCGACATCTGATCTCGGAC 59.618 55.000 15.40 2.63 33.47 4.79
989 2015 0.665298 CTGCGACATCTGATCTCGGA 59.335 55.000 15.40 12.23 35.43 4.55
990 2016 0.665298 TCTGCGACATCTGATCTCGG 59.335 55.000 15.40 2.28 0.00 4.63
991 2017 2.383450 CTTCTGCGACATCTGATCTCG 58.617 52.381 10.42 10.42 0.00 4.04
1148 2191 0.035343 GAACGAAAGGGGGAGGAAGG 60.035 60.000 0.00 0.00 0.00 3.46
1151 2194 2.951101 GCGAACGAAAGGGGGAGGA 61.951 63.158 0.00 0.00 0.00 3.71
1152 2195 2.436115 GCGAACGAAAGGGGGAGG 60.436 66.667 0.00 0.00 0.00 4.30
1153 2196 2.813908 CGCGAACGAAAGGGGGAG 60.814 66.667 0.00 0.00 43.93 4.30
1192 2235 1.094785 AATCCAATCAGCGAAACCGG 58.905 50.000 0.00 0.00 0.00 5.28
1229 2272 1.807165 CGTGATGACCCTGCGTGAG 60.807 63.158 0.00 0.00 0.00 3.51
1230 2273 2.261361 CGTGATGACCCTGCGTGA 59.739 61.111 0.00 0.00 0.00 4.35
1231 2274 2.815211 CCGTGATGACCCTGCGTG 60.815 66.667 0.00 0.00 0.00 5.34
1232 2275 2.994995 TCCGTGATGACCCTGCGT 60.995 61.111 0.00 0.00 0.00 5.24
1233 2276 2.202797 CTCCGTGATGACCCTGCG 60.203 66.667 0.00 0.00 0.00 5.18
1325 2371 0.868406 GGAAACAAGGTGCACGAGAG 59.132 55.000 11.45 3.19 0.00 3.20
1338 2384 1.070105 CGGGGAGAACACGGAAACA 59.930 57.895 0.00 0.00 0.00 2.83
1480 2550 6.227298 AGGTATACTGATCACCAACTGAAG 57.773 41.667 2.25 0.00 34.62 3.02
1501 2574 5.500234 TGTAGAAAATGGATTCCTGACAGG 58.500 41.667 15.99 15.99 36.46 4.00
1536 2609 7.113658 TCCTGATTCTTACATACTCAAGACC 57.886 40.000 0.00 0.00 30.67 3.85
1551 2625 2.859165 TTTGCCGAGTTCCTGATTCT 57.141 45.000 0.00 0.00 0.00 2.40
1559 2633 5.118510 CCAAATTTGTGTATTTGCCGAGTTC 59.881 40.000 16.73 0.00 41.82 3.01
1565 2639 5.177327 CACAGTCCAAATTTGTGTATTTGCC 59.823 40.000 16.73 0.00 41.82 4.52
1569 2643 5.144100 TCCCACAGTCCAAATTTGTGTATT 58.856 37.500 16.73 0.00 40.35 1.89
1571 2645 4.171878 TCCCACAGTCCAAATTTGTGTA 57.828 40.909 16.73 0.00 40.35 2.90
1572 2646 3.025322 TCCCACAGTCCAAATTTGTGT 57.975 42.857 16.73 11.55 40.35 3.72
1610 2684 4.451900 ACCGCCTGTTCCTAAATCAATAG 58.548 43.478 0.00 0.00 0.00 1.73
1655 2729 1.527034 AGAGCATTCTCAAAAGCGCA 58.473 45.000 11.47 0.00 41.81 6.09
1658 2732 4.421948 CCATGAAGAGCATTCTCAAAAGC 58.578 43.478 0.00 0.00 41.81 3.51
1669 2743 3.001514 GAGGGGCCATGAAGAGCA 58.998 61.111 4.39 0.00 0.00 4.26
1683 2757 1.943116 CTCACCCTCTGCAGACGAGG 61.943 65.000 13.74 16.01 46.11 4.63
1687 2764 1.612395 CCTCCTCACCCTCTGCAGAC 61.612 65.000 13.74 0.00 0.00 3.51
1697 2774 1.070914 GCATAGGTTAGCCTCCTCACC 59.929 57.143 0.00 0.00 45.64 4.02
1698 2775 1.762957 TGCATAGGTTAGCCTCCTCAC 59.237 52.381 0.00 0.00 45.64 3.51
1699 2776 2.174685 TGCATAGGTTAGCCTCCTCA 57.825 50.000 0.00 0.00 45.64 3.86
1700 2777 2.808567 GCTTGCATAGGTTAGCCTCCTC 60.809 54.545 0.00 0.00 45.64 3.71
1701 2778 1.141858 GCTTGCATAGGTTAGCCTCCT 59.858 52.381 0.00 0.00 45.64 3.69
1702 2779 1.141858 AGCTTGCATAGGTTAGCCTCC 59.858 52.381 0.00 0.00 45.64 4.30
1705 2782 2.044123 ACAGCTTGCATAGGTTAGCC 57.956 50.000 2.23 0.00 34.19 3.93
1708 2785 4.261801 GGAGAAACAGCTTGCATAGGTTA 58.738 43.478 0.00 0.00 30.51 2.85
1709 2786 3.084786 GGAGAAACAGCTTGCATAGGTT 58.915 45.455 0.00 0.00 30.51 3.50
1710 2787 2.619074 GGGAGAAACAGCTTGCATAGGT 60.619 50.000 0.00 0.00 34.10 3.08
1711 2788 2.019984 GGGAGAAACAGCTTGCATAGG 58.980 52.381 0.00 0.00 0.00 2.57
1739 2816 2.045561 TTTTCTGGCACGGTTGAAGA 57.954 45.000 0.00 0.00 35.30 2.87
1775 2852 7.161773 TGAAAAGGAGATGCAGATTAAAAGG 57.838 36.000 0.00 0.00 0.00 3.11
1802 2879 6.368791 GCACATCATAATCGTAAGCCTAATGA 59.631 38.462 0.00 0.00 37.18 2.57
1833 2910 9.143155 ACCTAAGTTTAATTCAGAAACCATGTT 57.857 29.630 0.00 0.00 37.48 2.71
1913 2990 8.129211 GTCTTCAAAACTAATACAAACACAGCT 58.871 33.333 0.00 0.00 0.00 4.24
1914 2991 7.378728 GGTCTTCAAAACTAATACAAACACAGC 59.621 37.037 0.00 0.00 0.00 4.40
1919 2996 8.626526 TCCTTGGTCTTCAAAACTAATACAAAC 58.373 33.333 0.00 0.00 34.56 2.93
1987 3067 6.162241 ACCCCCTCCTAAATTAACTGATGAAT 59.838 38.462 0.00 0.00 0.00 2.57
1995 3075 5.577100 ACAAGAACCCCCTCCTAAATTAAC 58.423 41.667 0.00 0.00 0.00 2.01
2004 3093 5.446260 TCTATTAAACAAGAACCCCCTCC 57.554 43.478 0.00 0.00 0.00 4.30
2043 3132 8.779354 AAACTAATTCATTACAGTGACCTCTC 57.221 34.615 0.00 0.00 0.00 3.20
2082 3171 4.347000 TCTTATATTTTGGGACGGAGGGAG 59.653 45.833 0.00 0.00 0.00 4.30
2083 3172 4.300345 TCTTATATTTTGGGACGGAGGGA 58.700 43.478 0.00 0.00 0.00 4.20
2084 3173 4.699925 TCTTATATTTTGGGACGGAGGG 57.300 45.455 0.00 0.00 0.00 4.30
2085 3174 4.510340 CGTTCTTATATTTTGGGACGGAGG 59.490 45.833 0.00 0.00 0.00 4.30
2086 3175 5.114081 ACGTTCTTATATTTTGGGACGGAG 58.886 41.667 0.00 0.00 0.00 4.63
2087 3176 5.088680 ACGTTCTTATATTTTGGGACGGA 57.911 39.130 0.00 0.00 0.00 4.69
2088 3177 5.806366 AACGTTCTTATATTTTGGGACGG 57.194 39.130 0.00 0.00 0.00 4.79
2125 3214 9.458374 CCAAAATATAAGAACGTTTTTGACACT 57.542 29.630 13.87 0.00 38.79 3.55
2126 3215 8.696175 CCCAAAATATAAGAACGTTTTTGACAC 58.304 33.333 13.87 0.00 38.79 3.67
2127 3216 8.630917 TCCCAAAATATAAGAACGTTTTTGACA 58.369 29.630 13.87 0.01 38.79 3.58
2128 3217 8.908678 GTCCCAAAATATAAGAACGTTTTTGAC 58.091 33.333 13.87 5.89 38.79 3.18
2129 3218 8.630917 TGTCCCAAAATATAAGAACGTTTTTGA 58.369 29.630 13.87 2.81 38.79 2.69
2130 3219 8.804688 TGTCCCAAAATATAAGAACGTTTTTG 57.195 30.769 13.87 12.16 37.14 2.44
2131 3220 8.852135 TCTGTCCCAAAATATAAGAACGTTTTT 58.148 29.630 9.22 9.22 0.00 1.94
2132 3221 8.398878 TCTGTCCCAAAATATAAGAACGTTTT 57.601 30.769 0.46 0.00 0.00 2.43
2133 3222 7.120726 CCTCTGTCCCAAAATATAAGAACGTTT 59.879 37.037 0.46 0.00 0.00 3.60
2134 3223 6.598064 CCTCTGTCCCAAAATATAAGAACGTT 59.402 38.462 0.00 0.00 0.00 3.99
2135 3224 6.113411 CCTCTGTCCCAAAATATAAGAACGT 58.887 40.000 0.00 0.00 0.00 3.99
2136 3225 5.527582 CCCTCTGTCCCAAAATATAAGAACG 59.472 44.000 0.00 0.00 0.00 3.95
2137 3226 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
2138 3227 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
2139 3228 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
2140 3229 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
2141 3230 7.947782 ATACTCCCTCTGTCCCAAAATATAA 57.052 36.000 0.00 0.00 0.00 0.98
2142 3231 7.349859 ACAATACTCCCTCTGTCCCAAAATATA 59.650 37.037 0.00 0.00 0.00 0.86
2143 3232 6.160459 ACAATACTCCCTCTGTCCCAAAATAT 59.840 38.462 0.00 0.00 0.00 1.28
2144 3233 5.491078 ACAATACTCCCTCTGTCCCAAAATA 59.509 40.000 0.00 0.00 0.00 1.40
2145 3234 4.292306 ACAATACTCCCTCTGTCCCAAAAT 59.708 41.667 0.00 0.00 0.00 1.82
2146 3235 3.655777 ACAATACTCCCTCTGTCCCAAAA 59.344 43.478 0.00 0.00 0.00 2.44
2147 3236 3.256704 ACAATACTCCCTCTGTCCCAAA 58.743 45.455 0.00 0.00 0.00 3.28
2148 3237 2.915869 ACAATACTCCCTCTGTCCCAA 58.084 47.619 0.00 0.00 0.00 4.12
2149 3238 2.642171 ACAATACTCCCTCTGTCCCA 57.358 50.000 0.00 0.00 0.00 4.37
2150 3239 3.108376 AGAACAATACTCCCTCTGTCCC 58.892 50.000 0.00 0.00 0.00 4.46
2151 3240 4.710375 TGTAGAACAATACTCCCTCTGTCC 59.290 45.833 0.00 0.00 0.00 4.02
2152 3241 5.916661 TGTAGAACAATACTCCCTCTGTC 57.083 43.478 0.00 0.00 0.00 3.51
2153 3242 6.440647 TGAATGTAGAACAATACTCCCTCTGT 59.559 38.462 0.00 0.00 0.00 3.41
2154 3243 6.878317 TGAATGTAGAACAATACTCCCTCTG 58.122 40.000 0.00 0.00 0.00 3.35
2155 3244 6.897966 TCTGAATGTAGAACAATACTCCCTCT 59.102 38.462 0.00 0.00 0.00 3.69
2156 3245 7.113658 TCTGAATGTAGAACAATACTCCCTC 57.886 40.000 0.00 0.00 0.00 4.30
2157 3246 7.496346 TTCTGAATGTAGAACAATACTCCCT 57.504 36.000 0.00 0.00 32.02 4.20
2190 3279 1.398390 CGTTGCTTAGTCTTCCATGGC 59.602 52.381 6.96 0.00 0.00 4.40
2193 3282 4.832248 TGAATCGTTGCTTAGTCTTCCAT 58.168 39.130 0.00 0.00 0.00 3.41
2280 3379 5.122396 CACTGGCTAGGTCAAGTTTTATGAC 59.878 44.000 0.85 0.00 45.08 3.06
2441 3540 5.741982 CCTAAAAACTTGTCAAAAGGTGTCG 59.258 40.000 0.00 0.00 0.00 4.35
2509 3612 8.780249 TGTCGGACTTCTAAAGAATTTAAAAGG 58.220 33.333 9.88 0.00 41.65 3.11
2515 3618 8.095169 AGTGTATGTCGGACTTCTAAAGAATTT 58.905 33.333 9.88 0.00 43.42 1.82
2517 3620 7.036220 CAGTGTATGTCGGACTTCTAAAGAAT 58.964 38.462 9.88 0.00 33.01 2.40
2521 3626 5.717078 ACAGTGTATGTCGGACTTCTAAA 57.283 39.130 9.88 0.00 37.75 1.85
2562 3667 3.341823 AGTAGTGAATTGGAGCTGCAAG 58.658 45.455 25.23 0.00 0.00 4.01
2580 3685 7.390718 GTGAAAATTGGAAGAGAAAGCCTAGTA 59.609 37.037 0.00 0.00 0.00 1.82
2763 4084 7.553881 AACGATGTTATTATTGAACTCCTGG 57.446 36.000 0.00 0.00 0.00 4.45
2844 4165 1.004745 CCCACTGTACCAATGCCTCTT 59.995 52.381 0.00 0.00 0.00 2.85
2961 4294 0.676782 ATTCCGTCTTTGCTTCCCGG 60.677 55.000 0.00 0.00 39.98 5.73
2976 4309 4.698304 TGATCCTTTACCACAAACGATTCC 59.302 41.667 0.00 0.00 0.00 3.01
3547 4989 5.426509 TGGACAGAATGGACTAGTCATCAAT 59.573 40.000 23.91 7.27 43.62 2.57
3682 5125 9.125026 AGATAAAATACAGTTGATCCATCCAAC 57.875 33.333 0.00 0.00 42.97 3.77
3712 5155 4.359434 TGCCACACCTCATTTACACTAA 57.641 40.909 0.00 0.00 0.00 2.24
4181 5938 6.095720 ACGGATTTTCCAAAAGTGTTTCACTA 59.904 34.615 2.80 0.00 39.16 2.74
4550 6307 7.123418 CAAGATCTTGCGAGTCAAAGGATACT 61.123 42.308 21.96 0.00 41.02 2.12
4766 6524 1.792757 ATGCTTGCCTTCCCTCCACA 61.793 55.000 0.00 0.00 0.00 4.17
4774 6532 4.082571 ACTCATTTGTACATGCTTGCCTTC 60.083 41.667 0.00 0.00 0.00 3.46
4779 6537 4.771590 ACCACTCATTTGTACATGCTTG 57.228 40.909 0.00 0.00 0.00 4.01
4870 6628 6.330278 TCTGATTATTTACAGGTGTCACTCG 58.670 40.000 2.35 0.00 35.20 4.18
5033 6854 5.435686 TGGTTCTGCAAGTTATAGACCAT 57.564 39.130 0.00 0.00 33.76 3.55
5072 6893 4.922206 AGTATGGAGTCTGAATTTGGCAA 58.078 39.130 0.00 0.00 0.00 4.52
5088 6909 5.720371 TCCAACAAATGTTTGGAGTATGG 57.280 39.130 9.98 9.24 42.34 2.74
5089 6910 6.923012 TGATCCAACAAATGTTTGGAGTATG 58.077 36.000 16.76 1.98 42.34 2.39
5090 6911 7.537596 TTGATCCAACAAATGTTTGGAGTAT 57.462 32.000 16.76 6.44 42.34 2.12
5092 6913 5.867903 TTGATCCAACAAATGTTTGGAGT 57.132 34.783 16.76 9.43 42.34 3.85
5093 6914 6.762661 ACTTTTGATCCAACAAATGTTTGGAG 59.237 34.615 16.76 2.35 41.72 3.86
5096 6917 6.687958 GCAACTTTTGATCCAACAAATGTTTG 59.312 34.615 16.67 4.04 46.08 2.93
5097 6918 6.373774 TGCAACTTTTGATCCAACAAATGTTT 59.626 30.769 16.67 6.17 46.08 2.83
5099 6920 5.426504 TGCAACTTTTGATCCAACAAATGT 58.573 33.333 0.00 0.00 44.20 2.71
5100 6921 5.987777 TGCAACTTTTGATCCAACAAATG 57.012 34.783 0.00 0.00 39.09 2.32
5101 6922 6.456718 CGTTTGCAACTTTTGATCCAACAAAT 60.457 34.615 0.00 0.00 39.09 2.32
5102 6923 5.163913 CGTTTGCAACTTTTGATCCAACAAA 60.164 36.000 0.00 0.00 37.87 2.83
5103 6924 4.328440 CGTTTGCAACTTTTGATCCAACAA 59.672 37.500 0.00 0.00 0.00 2.83
5104 6925 3.862267 CGTTTGCAACTTTTGATCCAACA 59.138 39.130 0.00 0.00 0.00 3.33
5105 6926 4.109050 TCGTTTGCAACTTTTGATCCAAC 58.891 39.130 0.00 0.00 0.00 3.77
5106 6927 4.358851 CTCGTTTGCAACTTTTGATCCAA 58.641 39.130 0.00 0.00 0.00 3.53
5107 6928 3.795150 GCTCGTTTGCAACTTTTGATCCA 60.795 43.478 0.00 0.00 0.00 3.41
5108 6929 2.726241 GCTCGTTTGCAACTTTTGATCC 59.274 45.455 0.00 0.00 0.00 3.36
5109 6930 2.401720 CGCTCGTTTGCAACTTTTGATC 59.598 45.455 0.00 0.00 0.00 2.92
5110 6931 2.032799 TCGCTCGTTTGCAACTTTTGAT 59.967 40.909 0.00 0.00 0.00 2.57
5111 6932 1.398739 TCGCTCGTTTGCAACTTTTGA 59.601 42.857 0.00 0.00 0.00 2.69
5112 6933 1.512771 GTCGCTCGTTTGCAACTTTTG 59.487 47.619 0.00 0.00 0.00 2.44
5113 6934 1.822581 GTCGCTCGTTTGCAACTTTT 58.177 45.000 0.00 0.00 0.00 2.27
5114 6935 0.315869 CGTCGCTCGTTTGCAACTTT 60.316 50.000 0.00 0.00 34.52 2.66
5115 6936 1.275657 CGTCGCTCGTTTGCAACTT 59.724 52.632 0.00 0.00 34.52 2.66
5116 6937 2.594962 CCGTCGCTCGTTTGCAACT 61.595 57.895 0.00 0.00 37.94 3.16
5117 6938 2.127758 CCGTCGCTCGTTTGCAAC 60.128 61.111 0.00 0.00 37.94 4.17
5118 6939 2.279584 TCCGTCGCTCGTTTGCAA 60.280 55.556 0.00 0.00 37.94 4.08
5119 6940 3.033764 GTCCGTCGCTCGTTTGCA 61.034 61.111 0.00 0.00 37.94 4.08
5120 6941 4.117372 CGTCCGTCGCTCGTTTGC 62.117 66.667 0.00 0.00 37.94 3.68
5121 6942 3.467119 CCGTCCGTCGCTCGTTTG 61.467 66.667 6.56 0.00 38.35 2.93
5122 6943 3.663176 TCCGTCCGTCGCTCGTTT 61.663 61.111 6.56 0.00 38.35 3.60
5123 6944 4.395583 GTCCGTCCGTCGCTCGTT 62.396 66.667 6.56 0.00 38.35 3.85
5126 6947 3.264866 AAGTGTCCGTCCGTCGCTC 62.265 63.158 0.00 0.00 38.35 5.03
5127 6948 3.264866 GAAGTGTCCGTCCGTCGCT 62.265 63.158 0.00 0.00 38.35 4.93
5128 6949 2.804090 GAAGTGTCCGTCCGTCGC 60.804 66.667 0.00 0.00 38.35 5.19
5129 6950 1.442184 CAGAAGTGTCCGTCCGTCG 60.442 63.158 0.00 0.00 39.52 5.12
5130 6951 0.031721 AACAGAAGTGTCCGTCCGTC 59.968 55.000 0.00 0.00 35.08 4.79
5131 6952 0.249322 CAACAGAAGTGTCCGTCCGT 60.249 55.000 0.00 0.00 35.08 4.69
5132 6953 0.249322 ACAACAGAAGTGTCCGTCCG 60.249 55.000 0.00 0.00 35.08 4.79
5133 6954 1.202486 TCACAACAGAAGTGTCCGTCC 60.202 52.381 0.00 0.00 35.08 4.79
5134 6955 2.218953 TCACAACAGAAGTGTCCGTC 57.781 50.000 0.00 0.00 35.08 4.79
5135 6956 2.158957 ACATCACAACAGAAGTGTCCGT 60.159 45.455 0.00 0.00 35.08 4.69
5136 6957 2.483876 ACATCACAACAGAAGTGTCCG 58.516 47.619 0.00 0.00 35.08 4.79
5137 6958 3.746492 GGTACATCACAACAGAAGTGTCC 59.254 47.826 0.00 0.00 35.08 4.02
5138 6959 3.746492 GGGTACATCACAACAGAAGTGTC 59.254 47.826 0.00 0.00 35.08 3.67
5139 6960 3.391296 AGGGTACATCACAACAGAAGTGT 59.609 43.478 0.00 0.00 39.19 3.55
5140 6961 4.008074 AGGGTACATCACAACAGAAGTG 57.992 45.455 0.00 0.00 38.32 3.16
5141 6962 4.591498 TGTAGGGTACATCACAACAGAAGT 59.409 41.667 0.00 0.00 32.89 3.01
5142 6963 5.147330 TGTAGGGTACATCACAACAGAAG 57.853 43.478 0.00 0.00 32.89 2.85
5143 6964 4.020573 CCTGTAGGGTACATCACAACAGAA 60.021 45.833 0.00 0.00 38.15 3.02
5144 6965 3.513912 CCTGTAGGGTACATCACAACAGA 59.486 47.826 0.00 0.00 38.15 3.41
5145 6966 3.861840 CCTGTAGGGTACATCACAACAG 58.138 50.000 0.00 0.00 38.15 3.16
5146 6967 3.973206 CCTGTAGGGTACATCACAACA 57.027 47.619 0.00 0.00 38.15 3.33
5158 6979 2.845363 ACGTGGTAAAACCTGTAGGG 57.155 50.000 2.53 0.00 39.58 3.53
5159 6980 4.525912 ACTACGTGGTAAAACCTGTAGG 57.474 45.455 21.94 0.00 44.63 3.18
5160 6981 6.012658 TGTACTACGTGGTAAAACCTGTAG 57.987 41.667 13.78 18.96 45.22 2.74
5161 6982 6.208402 TCATGTACTACGTGGTAAAACCTGTA 59.792 38.462 13.78 0.59 39.58 2.74
5162 6983 4.935352 TGTACTACGTGGTAAAACCTGT 57.065 40.909 13.78 0.00 39.58 4.00
5163 6984 5.472148 TCATGTACTACGTGGTAAAACCTG 58.528 41.667 13.78 7.72 39.58 4.00
5164 6985 5.726980 TCATGTACTACGTGGTAAAACCT 57.273 39.130 13.78 0.00 39.58 3.50
5165 6986 6.973229 AATCATGTACTACGTGGTAAAACC 57.027 37.500 13.78 2.02 35.86 3.27
5166 6987 7.959109 GGAAAATCATGTACTACGTGGTAAAAC 59.041 37.037 13.78 4.92 35.86 2.43
5193 7014 6.695278 CGTGGTCACATTTTGTTTAAACATCT 59.305 34.615 21.17 6.89 38.95 2.90
5209 7030 0.610687 TATCATGTGCCGTGGTCACA 59.389 50.000 15.19 15.19 46.86 3.58
5212 7033 1.062002 CGTTTATCATGTGCCGTGGTC 59.938 52.381 0.00 0.00 0.00 4.02
5218 7039 5.512788 CAGAAAATCACGTTTATCATGTGCC 59.487 40.000 0.00 0.00 41.66 5.01
5251 7072 0.530744 TCGGGTGAGTACATCAGTGC 59.469 55.000 0.00 0.00 39.07 4.40
5279 7101 2.669569 CGTGGTGGAGTGGCAAGG 60.670 66.667 0.00 0.00 0.00 3.61
5295 7117 0.732571 GGGTGTGTATGGTGCATTCG 59.267 55.000 0.00 0.00 0.00 3.34
5303 7125 1.494296 TGATCCATGGGGTGTGTATGG 59.506 52.381 13.02 0.00 42.12 2.74
5312 7134 3.254960 AGAGGTAATCTGATCCATGGGG 58.745 50.000 13.02 0.22 36.69 4.96
5330 7152 1.065928 GGGTATGCACGGACGAGAG 59.934 63.158 0.00 0.00 0.00 3.20
5342 7164 1.691976 TCTACTTCGGCATGGGGTATG 59.308 52.381 0.00 0.00 39.88 2.39
5343 7165 2.097110 TCTACTTCGGCATGGGGTAT 57.903 50.000 0.00 0.00 0.00 2.73
5344 7166 1.868713 TTCTACTTCGGCATGGGGTA 58.131 50.000 0.00 0.00 0.00 3.69
5345 7167 0.988832 TTTCTACTTCGGCATGGGGT 59.011 50.000 0.00 0.00 0.00 4.95
5346 7168 1.209504 TCTTTCTACTTCGGCATGGGG 59.790 52.381 0.00 0.00 0.00 4.96
5347 7169 2.555199 CTCTTTCTACTTCGGCATGGG 58.445 52.381 0.00 0.00 0.00 4.00
5372 7194 8.928448 TGACAAAGTTCTTAGCTATCCATCTAT 58.072 33.333 0.00 0.00 0.00 1.98
5373 7195 8.306313 TGACAAAGTTCTTAGCTATCCATCTA 57.694 34.615 0.00 0.00 0.00 1.98
5402 7224 1.817447 GGCTGCAGATGCTCTCTTTTT 59.183 47.619 20.43 0.00 42.66 1.94
5403 7225 1.004511 AGGCTGCAGATGCTCTCTTTT 59.995 47.619 20.43 0.00 42.66 2.27
5404 7226 0.619505 AGGCTGCAGATGCTCTCTTT 59.380 50.000 20.43 0.00 42.66 2.52
5405 7227 0.178533 GAGGCTGCAGATGCTCTCTT 59.821 55.000 20.43 0.00 42.66 2.85
5406 7228 0.976590 TGAGGCTGCAGATGCTCTCT 60.977 55.000 20.43 2.04 42.66 3.10
5407 7229 0.810823 GTGAGGCTGCAGATGCTCTC 60.811 60.000 20.43 14.73 42.66 3.20
5408 7230 1.221293 GTGAGGCTGCAGATGCTCT 59.779 57.895 20.43 5.79 42.66 4.09
5409 7231 2.172372 CGTGAGGCTGCAGATGCTC 61.172 63.158 20.43 5.09 42.66 4.26
5410 7232 2.125229 CGTGAGGCTGCAGATGCT 60.125 61.111 20.43 0.00 42.66 3.79
5411 7233 3.873883 GCGTGAGGCTGCAGATGC 61.874 66.667 20.43 9.90 39.11 3.91
5431 7512 1.594518 CGTGCGTTTGAGTCCAGTTTG 60.595 52.381 0.00 0.00 0.00 2.93
5433 7514 0.179094 TCGTGCGTTTGAGTCCAGTT 60.179 50.000 0.00 0.00 0.00 3.16
5436 7517 1.954146 GCTCGTGCGTTTGAGTCCA 60.954 57.895 0.00 0.00 34.67 4.02
5462 7543 1.042229 TCGAGTTCTTTTGACCGGGA 58.958 50.000 6.32 0.00 0.00 5.14
5464 7545 1.145803 GGTCGAGTTCTTTTGACCGG 58.854 55.000 0.00 0.00 40.79 5.28
5478 7559 3.546543 GGCATCCGGATGGGTCGA 61.547 66.667 38.49 1.58 39.16 4.20
5479 7560 3.521529 GAGGCATCCGGATGGGTCG 62.522 68.421 38.49 18.92 39.16 4.79
5480 7561 1.983119 TTGAGGCATCCGGATGGGTC 61.983 60.000 38.49 24.92 39.16 4.46
5505 7586 3.765505 GAACAGTTCGTACGTTTGAGG 57.234 47.619 16.05 4.21 0.00 3.86
5518 7599 2.594592 GCTGGGTGCCGAACAGTT 60.595 61.111 0.00 0.00 34.79 3.16
5533 7614 4.942363 ATATTTGGGCTGGATATGAGCT 57.058 40.909 0.00 0.00 36.63 4.09
5534 7615 5.591877 CCTTATATTTGGGCTGGATATGAGC 59.408 44.000 0.00 0.00 35.57 4.26
5539 7620 4.917040 TCCACCTTATATTTGGGCTGGATA 59.083 41.667 0.00 0.00 30.96 2.59
5543 7624 6.484288 TCATATCCACCTTATATTTGGGCTG 58.516 40.000 0.00 0.00 0.00 4.85
5553 7634 1.279271 GCCGCCTCATATCCACCTTAT 59.721 52.381 0.00 0.00 0.00 1.73
5559 7640 0.252696 ATAGGGCCGCCTCATATCCA 60.253 55.000 9.86 0.00 0.00 3.41
5589 7670 1.684734 AGATGGGTTAGGCGGACGT 60.685 57.895 0.00 0.00 0.00 4.34
5590 7671 1.227263 CAGATGGGTTAGGCGGACG 60.227 63.158 0.00 0.00 0.00 4.79
5591 7672 0.462047 CACAGATGGGTTAGGCGGAC 60.462 60.000 0.00 0.00 0.00 4.79
5592 7673 1.622607 CCACAGATGGGTTAGGCGGA 61.623 60.000 0.00 0.00 43.04 5.54
5641 7722 4.956700 TGAAGTGAGGTTAGGATTCGATCT 59.043 41.667 0.00 0.00 0.00 2.75
5645 7726 4.158764 AGAGTGAAGTGAGGTTAGGATTCG 59.841 45.833 0.00 0.00 0.00 3.34
5646 7727 5.415221 CAGAGTGAAGTGAGGTTAGGATTC 58.585 45.833 0.00 0.00 0.00 2.52
5649 7730 2.563179 GCAGAGTGAAGTGAGGTTAGGA 59.437 50.000 0.00 0.00 0.00 2.94
5655 7736 1.671261 CCGAAGCAGAGTGAAGTGAGG 60.671 57.143 0.00 0.00 0.00 3.86
5679 7760 0.036875 AAAGGTTGGAGAAGAGGCGG 59.963 55.000 0.00 0.00 0.00 6.13
5680 7761 1.002544 AGAAAGGTTGGAGAAGAGGCG 59.997 52.381 0.00 0.00 0.00 5.52
5682 7763 2.639839 TGGAGAAAGGTTGGAGAAGAGG 59.360 50.000 0.00 0.00 0.00 3.69
5691 7772 2.161609 GTGGCGTATTGGAGAAAGGTTG 59.838 50.000 0.00 0.00 0.00 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.