Multiple sequence alignment - TraesCS5D01G499400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G499400 chr5D 100.000 5196 0 0 1 5196 528762284 528767479 0.000000e+00 9596.0
1 TraesCS5D01G499400 chr5D 87.884 1725 160 23 1 1701 528802814 528804513 0.000000e+00 1982.0
2 TraesCS5D01G499400 chr5D 80.935 2182 349 39 1928 4064 528805335 528807494 0.000000e+00 1663.0
3 TraesCS5D01G499400 chr5D 81.514 1942 316 29 2002 3930 528753083 528754994 0.000000e+00 1557.0
4 TraesCS5D01G499400 chr5D 85.646 1254 159 12 456 1697 528747820 528749064 0.000000e+00 1299.0
5 TraesCS5D01G499400 chr5D 98.333 240 4 0 1 240 528745844 528746083 6.220000e-114 422.0
6 TraesCS5D01G499400 chr5D 76.774 155 34 2 1444 1597 4051541 4051388 9.270000e-13 86.1
7 TraesCS5D01G499400 chr5B 91.237 2659 133 23 1828 4430 665940629 665943243 0.000000e+00 3528.0
8 TraesCS5D01G499400 chr5B 93.141 1385 65 9 447 1819 665939082 665940448 0.000000e+00 2004.0
9 TraesCS5D01G499400 chr5B 86.624 1256 141 13 447 1684 665958679 665959925 0.000000e+00 1363.0
10 TraesCS5D01G499400 chr5B 94.463 307 17 0 1 307 665958268 665958574 1.690000e-129 473.0
11 TraesCS5D01G499400 chr5B 93.160 307 21 0 1 307 665938646 665938952 7.930000e-123 451.0
12 TraesCS5D01G499400 chr5B 92.667 300 13 2 4894 5193 665943243 665943533 1.730000e-114 424.0
13 TraesCS5D01G499400 chr5B 80.350 514 80 9 2036 2537 665961225 665961729 2.290000e-98 370.0
14 TraesCS5D01G499400 chr5B 93.074 231 13 3 4967 5196 665830441 665830669 8.340000e-88 335.0
15 TraesCS5D01G499400 chr5B 77.647 340 49 11 4814 5126 665963383 665963722 1.150000e-41 182.0
16 TraesCS5D01G499400 chr5B 85.149 101 13 2 1496 1595 6881944 6881845 9.210000e-18 102.0
17 TraesCS5D01G499400 chr6B 80.822 1971 318 34 2137 4069 106511585 106513533 0.000000e+00 1491.0
18 TraesCS5D01G499400 chr6B 82.943 1237 181 16 479 1699 106509384 106510606 0.000000e+00 1088.0
19 TraesCS5D01G499400 chrUn 81.892 1237 194 16 479 1699 97782383 97783605 0.000000e+00 1016.0
20 TraesCS5D01G499400 chrUn 81.570 1134 169 23 2137 3238 97784586 97785711 0.000000e+00 900.0
21 TraesCS5D01G499400 chrUn 79.898 786 132 16 3294 4069 97785708 97786477 2.110000e-153 553.0
22 TraesCS5D01G499400 chr1D 82.755 980 152 12 706 1677 476570482 476569512 0.000000e+00 857.0
23 TraesCS5D01G499400 chr1D 79.089 1076 169 35 2137 3175 476568595 476567539 0.000000e+00 689.0
24 TraesCS5D01G499400 chr1B 83.204 905 137 9 780 1677 662843672 662842776 0.000000e+00 815.0
25 TraesCS5D01G499400 chr1A 83.439 157 23 3 814 969 584840507 584840661 5.420000e-30 143.0
26 TraesCS5D01G499400 chr7B 95.556 45 2 0 4714 4758 215952992 215952948 7.220000e-09 73.1
27 TraesCS5D01G499400 chr3D 95.556 45 2 0 4714 4758 127646483 127646527 7.220000e-09 73.1
28 TraesCS5D01G499400 chr3D 93.333 45 3 0 4714 4758 523597902 523597858 3.360000e-07 67.6
29 TraesCS5D01G499400 chr2A 93.878 49 2 1 4711 4758 16731762 16731714 7.220000e-09 73.1
30 TraesCS5D01G499400 chr3A 93.333 45 3 0 4714 4758 658320945 658320901 3.360000e-07 67.6
31 TraesCS5D01G499400 chr4A 93.023 43 3 0 4716 4758 743332898 743332856 4.340000e-06 63.9
32 TraesCS5D01G499400 chr5A 89.796 49 4 1 4711 4758 40079841 40079889 1.560000e-05 62.1
33 TraesCS5D01G499400 chr2B 89.796 49 4 1 4709 4756 26324629 26324581 1.560000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G499400 chr5D 528762284 528767479 5195 False 9596.00 9596 100.00000 1 5196 1 chr5D.!!$F2 5195
1 TraesCS5D01G499400 chr5D 528802814 528807494 4680 False 1822.50 1982 84.40950 1 4064 2 chr5D.!!$F4 4063
2 TraesCS5D01G499400 chr5D 528753083 528754994 1911 False 1557.00 1557 81.51400 2002 3930 1 chr5D.!!$F1 1928
3 TraesCS5D01G499400 chr5D 528745844 528749064 3220 False 860.50 1299 91.98950 1 1697 2 chr5D.!!$F3 1696
4 TraesCS5D01G499400 chr5B 665938646 665943533 4887 False 1601.75 3528 92.55125 1 5193 4 chr5B.!!$F2 5192
5 TraesCS5D01G499400 chr5B 665958268 665963722 5454 False 597.00 1363 84.77100 1 5126 4 chr5B.!!$F3 5125
6 TraesCS5D01G499400 chr6B 106509384 106513533 4149 False 1289.50 1491 81.88250 479 4069 2 chr6B.!!$F1 3590
7 TraesCS5D01G499400 chrUn 97782383 97786477 4094 False 823.00 1016 81.12000 479 4069 3 chrUn.!!$F1 3590
8 TraesCS5D01G499400 chr1D 476567539 476570482 2943 True 773.00 857 80.92200 706 3175 2 chr1D.!!$R1 2469
9 TraesCS5D01G499400 chr1B 662842776 662843672 896 True 815.00 815 83.20400 780 1677 1 chr1B.!!$R1 897

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
908 2480 1.211457 GAGTACTCTCGGGTCTGGGTA 59.789 57.143 15.91 0.0 0.00 3.69 F
1825 4630 0.025513 CACGCTAGCTCATTCGCAAC 59.974 55.000 13.93 0.0 0.00 4.17 F
3460 6959 0.404040 CACCACCTTCCTGGCCTTAA 59.596 55.000 3.32 0.0 40.22 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2159 5495 0.179045 CCCTTATCTTGGCGAGTGGG 60.179 60.0 0.77 6.14 0.00 4.61 R
3708 7207 0.960364 CCTAACCATTGCGGCAGTGT 60.960 55.0 21.66 8.91 39.03 3.55 R
4703 8640 0.030908 GTCCGAACTATGAGAGGCGG 59.969 60.0 4.61 4.61 44.26 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 106 2.439104 GGAGGCCCTGCTCGAAGAT 61.439 63.158 0.00 0.00 33.89 2.40
274 275 4.399618 TGAACCAAGACGAAATTTGTCCAA 59.600 37.500 9.61 0.00 37.04 3.53
281 286 3.059166 ACGAAATTTGTCCAATGCTTGC 58.941 40.909 0.00 0.00 0.00 4.01
303 308 2.866762 GCTCTAATTGTTCTGGGTAGCG 59.133 50.000 0.00 0.00 0.00 4.26
310 315 3.472283 TGTTCTGGGTAGCGTTTGTTA 57.528 42.857 0.00 0.00 0.00 2.41
313 318 4.251268 GTTCTGGGTAGCGTTTGTTAGAT 58.749 43.478 0.00 0.00 0.00 1.98
317 322 4.186159 TGGGTAGCGTTTGTTAGATTAGC 58.814 43.478 0.00 0.00 0.00 3.09
318 323 3.558829 GGGTAGCGTTTGTTAGATTAGCC 59.441 47.826 0.00 0.00 0.00 3.93
321 326 4.946784 AGCGTTTGTTAGATTAGCCAAG 57.053 40.909 0.00 0.00 0.00 3.61
324 329 5.472137 AGCGTTTGTTAGATTAGCCAAGAAA 59.528 36.000 0.00 0.00 0.00 2.52
325 330 6.016610 AGCGTTTGTTAGATTAGCCAAGAAAA 60.017 34.615 0.00 0.00 0.00 2.29
372 383 7.490962 TTTTTGAGAGTCAATGAATGTACGT 57.509 32.000 0.00 0.00 36.11 3.57
374 385 8.771920 TTTTGAGAGTCAATGAATGTACGTAT 57.228 30.769 0.00 0.00 36.11 3.06
375 386 7.755582 TTGAGAGTCAATGAATGTACGTATG 57.244 36.000 0.00 0.00 30.26 2.39
376 387 7.095695 TGAGAGTCAATGAATGTACGTATGA 57.904 36.000 0.00 0.00 0.00 2.15
377 388 7.543756 TGAGAGTCAATGAATGTACGTATGAA 58.456 34.615 0.00 0.00 0.00 2.57
378 389 7.702348 TGAGAGTCAATGAATGTACGTATGAAG 59.298 37.037 0.00 0.00 0.00 3.02
379 390 6.980978 AGAGTCAATGAATGTACGTATGAAGG 59.019 38.462 0.00 0.00 0.00 3.46
459 2005 3.708563 ACTTATGTTGTGTTGTGGTGC 57.291 42.857 0.00 0.00 0.00 5.01
472 2018 5.687285 GTGTTGTGGTGCTTGATTTCTAAAG 59.313 40.000 0.00 0.00 0.00 1.85
475 2021 6.317789 TGTGGTGCTTGATTTCTAAAGAAG 57.682 37.500 0.00 0.00 35.21 2.85
585 2147 1.251251 AGTGTTGCCCTCAAATCAGC 58.749 50.000 0.00 0.00 33.37 4.26
768 2340 4.527944 GAGGGATAAGGAAAAACAGGAGG 58.472 47.826 0.00 0.00 0.00 4.30
770 2342 4.017126 GGGATAAGGAAAAACAGGAGGTG 58.983 47.826 0.00 0.00 0.00 4.00
879 2451 5.653507 CACGATTGGTTTTCAATGATCCAT 58.346 37.500 0.00 0.00 45.36 3.41
902 2474 3.506844 AGTTCAAAGAGTACTCTCGGGTC 59.493 47.826 25.34 15.30 44.65 4.46
908 2480 1.211457 GAGTACTCTCGGGTCTGGGTA 59.789 57.143 15.91 0.00 0.00 3.69
933 2505 2.875933 GTGTCCCAGACGTTTGATTTGA 59.124 45.455 7.81 0.00 34.95 2.69
1056 2628 7.510675 TGGTAAGAAGGTCCTAATCATCTTT 57.489 36.000 7.86 0.00 0.00 2.52
1071 2643 3.330405 TCATCTTTGATGACCTGTGGGAA 59.670 43.478 6.19 0.00 36.25 3.97
1079 2651 0.476771 GACCTGTGGGAAAGGGAACA 59.523 55.000 0.00 0.00 39.30 3.18
1081 2653 1.289530 ACCTGTGGGAAAGGGAACAAA 59.710 47.619 0.00 0.00 39.30 2.83
1183 2761 8.767478 AGAAAATATTGCACAGAAAATTCAGG 57.233 30.769 0.00 0.00 0.00 3.86
1393 2971 1.600957 CATCTGATGAATGGGTGTCGC 59.399 52.381 12.27 0.00 0.00 5.19
1601 3179 1.133513 TGGACTTGTTGAGCCACCAAT 60.134 47.619 0.00 0.00 30.03 3.16
1711 3410 4.202202 GGGTGAGTTACTGATCTGATCTGG 60.202 50.000 23.03 15.80 33.11 3.86
1712 3411 4.404073 GGTGAGTTACTGATCTGATCTGGT 59.596 45.833 23.03 19.47 33.11 4.00
1714 3413 5.019470 TGAGTTACTGATCTGATCTGGTGT 58.981 41.667 23.03 15.82 33.11 4.16
1715 3414 5.481824 TGAGTTACTGATCTGATCTGGTGTT 59.518 40.000 23.03 9.17 33.11 3.32
1716 3415 5.728471 AGTTACTGATCTGATCTGGTGTTG 58.272 41.667 23.03 7.39 33.11 3.33
1717 3416 5.481824 AGTTACTGATCTGATCTGGTGTTGA 59.518 40.000 23.03 5.43 33.11 3.18
1718 3417 6.155910 AGTTACTGATCTGATCTGGTGTTGAT 59.844 38.462 23.03 7.74 33.11 2.57
1719 3418 5.021033 ACTGATCTGATCTGGTGTTGATC 57.979 43.478 23.03 0.00 40.34 2.92
1721 3420 5.019785 TGATCTGATCTGGTGTTGATCTG 57.980 43.478 17.82 0.00 40.51 2.90
1780 3825 5.061721 ACTTCCAGTACACCAAAAATCCT 57.938 39.130 0.00 0.00 0.00 3.24
1819 4624 0.824109 TGCCTACACGCTAGCTCATT 59.176 50.000 13.93 0.00 0.00 2.57
1825 4630 0.025513 CACGCTAGCTCATTCGCAAC 59.974 55.000 13.93 0.00 0.00 4.17
1917 5154 6.369615 GTGTACAAGGCTTTTCGATTACCTTA 59.630 38.462 0.00 0.00 38.67 2.69
1926 5163 7.169476 GGCTTTTCGATTACCTTATCTGTCTAC 59.831 40.741 0.00 0.00 0.00 2.59
1932 5169 9.053840 TCGATTACCTTATCTGTCTACTAGTTG 57.946 37.037 0.00 0.00 0.00 3.16
1933 5170 8.838365 CGATTACCTTATCTGTCTACTAGTTGT 58.162 37.037 0.00 0.00 0.00 3.32
1988 5239 5.359194 AAGGTGTTCTTCTCAAGTCTGAA 57.641 39.130 0.00 0.00 0.00 3.02
2101 5371 6.701340 CCGATGAAATTGGTATAGAGGATCA 58.299 40.000 0.00 0.00 43.35 2.92
2117 5387 1.195448 GATCAAACCTGCCGATATGCG 59.805 52.381 0.00 0.00 40.47 4.73
2206 5548 5.584251 TGCATTTTCATGATCGTAGCAACTA 59.416 36.000 0.00 0.00 31.07 2.24
2303 5645 4.521146 AGTTGCCTGATTCTATTGGTCAG 58.479 43.478 0.00 0.00 39.20 3.51
2340 5682 4.262207 GGTATCTCGATGCTTCTTCATGGA 60.262 45.833 0.00 0.00 31.82 3.41
2405 5765 1.613437 CTGGGTGCCCTTAACAAACTG 59.387 52.381 8.91 0.00 36.94 3.16
2426 5786 7.609760 ACTGCAGTATTTGAATTTATCACGA 57.390 32.000 20.16 0.00 37.92 4.35
2429 5789 6.091577 TGCAGTATTTGAATTTATCACGACGT 59.908 34.615 0.00 0.00 37.92 4.34
2432 5792 3.733024 TTGAATTTATCACGACGTGGC 57.267 42.857 26.55 9.03 37.92 5.01
2435 5795 1.651987 ATTTATCACGACGTGGCAGG 58.348 50.000 26.55 5.50 33.87 4.85
2484 5844 4.310769 CAATCTCATGGAACTCCGGTATC 58.689 47.826 0.00 0.00 39.43 2.24
2583 6018 0.750911 CCTTCCCAATCTGGAGCAGC 60.751 60.000 0.00 0.00 40.96 5.25
2589 6024 0.747283 CAATCTGGAGCAGCTGGACC 60.747 60.000 17.12 0.00 0.00 4.46
2711 6165 3.565307 TGTGGCCAAATTGGATATCCTC 58.435 45.455 22.35 8.64 40.96 3.71
2733 6187 3.816523 CAGGCTTTTTGGATTGTTGCAAT 59.183 39.130 0.59 0.00 32.82 3.56
2862 6358 3.834813 TGTGAAGTCTGTAGAAGAGGCAT 59.165 43.478 0.00 0.00 34.84 4.40
2865 6361 2.465813 AGTCTGTAGAAGAGGCATGCT 58.534 47.619 18.92 3.20 34.84 3.79
3087 6583 1.202698 GCTTGAGGTTGTGGAGTCTGT 60.203 52.381 0.00 0.00 0.00 3.41
3096 6595 2.807045 GGAGTCTGTCGTGCAGCG 60.807 66.667 0.00 0.00 44.66 5.18
3460 6959 0.404040 CACCACCTTCCTGGCCTTAA 59.596 55.000 3.32 0.00 40.22 1.85
3558 7057 3.273434 CTCTCCCTCGAATGCATTGAAA 58.727 45.455 18.59 0.59 0.00 2.69
3605 7104 2.558359 TGAGCTCACATCTCTTCGACAA 59.442 45.455 13.74 0.00 0.00 3.18
3628 7127 8.796475 ACAACTCAACTTAATATGCATGAACTT 58.204 29.630 10.16 0.31 0.00 2.66
3635 7134 9.461312 AACTTAATATGCATGAACTTCCTACAA 57.539 29.630 10.16 0.00 0.00 2.41
3708 7207 1.675483 AGAACTGCAATGCGTTGACAA 59.325 42.857 22.81 5.95 37.53 3.18
3760 7259 4.341366 TGCTCAAGACACTTGAGATTCA 57.659 40.909 32.07 22.07 46.57 2.57
3794 7587 3.068873 GCATCATCTCTTTACCGGAGAGT 59.931 47.826 9.46 0.00 42.15 3.24
3798 7591 6.845758 TCATCTCTTTACCGGAGAGTTTAA 57.154 37.500 9.46 0.00 42.15 1.52
3848 7719 2.706190 GGACTGCCCTCACTTATATGGT 59.294 50.000 0.00 0.00 0.00 3.55
3881 7752 3.750130 CAGAGGTGAACCAGATGAAACTG 59.250 47.826 1.62 0.00 38.89 3.16
3882 7753 3.392616 AGAGGTGAACCAGATGAAACTGT 59.607 43.478 1.62 0.00 38.89 3.55
3886 7757 3.430218 GTGAACCAGATGAAACTGTCTCG 59.570 47.826 0.00 0.00 36.30 4.04
3888 7759 0.994995 CCAGATGAAACTGTCTCGCG 59.005 55.000 0.00 0.00 36.30 5.87
3936 7812 8.621532 TCATTGCTCTTATGTTTTACTGACTT 57.378 30.769 0.00 0.00 0.00 3.01
3940 7816 9.515020 TTGCTCTTATGTTTTACTGACTTTTTG 57.485 29.630 0.00 0.00 0.00 2.44
3998 7886 7.399523 CCTCGCAAATCTTGTTAGTTGTATAC 58.600 38.462 0.00 0.00 0.00 1.47
4002 7890 6.967199 GCAAATCTTGTTAGTTGTATACTGGC 59.033 38.462 4.17 0.00 37.73 4.85
4004 7892 7.849804 AATCTTGTTAGTTGTATACTGGCAG 57.150 36.000 14.16 14.16 37.73 4.85
4069 7958 5.356190 GGGGTAAACCAGATTAGCTTGTTAC 59.644 44.000 0.00 0.00 42.91 2.50
4071 7960 6.093633 GGGTAAACCAGATTAGCTTGTTACAG 59.906 42.308 0.00 0.00 39.85 2.74
4074 7963 7.668525 AAACCAGATTAGCTTGTTACAGTAC 57.331 36.000 0.00 0.00 31.81 2.73
4080 7969 9.938670 CAGATTAGCTTGTTACAGTACTACTAG 57.061 37.037 0.00 0.00 0.00 2.57
4085 7974 8.174733 AGCTTGTTACAGTACTACTAGAAACA 57.825 34.615 9.14 5.32 0.00 2.83
4086 7975 8.636213 AGCTTGTTACAGTACTACTAGAAACAA 58.364 33.333 15.38 15.38 34.75 2.83
4087 7976 9.420551 GCTTGTTACAGTACTACTAGAAACAAT 57.579 33.333 16.01 0.00 35.10 2.71
4123 8012 9.974980 TTTAACAATGTTACCTTCCAGAAAATC 57.025 29.630 5.19 0.00 0.00 2.17
4124 8013 6.590234 ACAATGTTACCTTCCAGAAAATCC 57.410 37.500 0.00 0.00 0.00 3.01
4129 8018 5.246656 TGTTACCTTCCAGAAAATCCTCGTA 59.753 40.000 0.00 0.00 0.00 3.43
4182 8072 8.354011 ACGTCTACTTCATTGCAGATTATTAC 57.646 34.615 0.00 0.00 0.00 1.89
4192 8082 6.925610 TTGCAGATTATTACTAGTGCCTTG 57.074 37.500 5.39 0.00 0.00 3.61
4212 8102 5.913514 CCTTGTAAATCTATGGACGAGTACG 59.086 44.000 0.00 0.00 45.75 3.67
4254 8144 0.744414 ACGATTCAGAATGGTGGCCG 60.744 55.000 9.83 4.35 36.16 6.13
4258 8183 0.394216 TTCAGAATGGTGGCCGATGG 60.394 55.000 0.00 0.00 36.16 3.51
4294 8228 2.685202 GTGGAGGCCTTCACCTAGT 58.315 57.895 31.43 0.00 41.32 2.57
4297 8231 2.772515 GTGGAGGCCTTCACCTAGTATT 59.227 50.000 31.43 0.00 41.32 1.89
4311 8245 6.537301 TCACCTAGTATTAAACGCTTTGATGG 59.463 38.462 0.00 0.00 0.00 3.51
4329 8263 8.481974 TTTGATGGTCTTCATTTGCATATTTG 57.518 30.769 0.00 0.00 35.97 2.32
4340 8274 8.254178 TCATTTGCATATTTGTTGCCTTTTAG 57.746 30.769 0.00 0.00 39.39 1.85
4348 8282 4.599047 TTGTTGCCTTTTAGTTCCCATG 57.401 40.909 0.00 0.00 0.00 3.66
4350 8284 4.415596 TGTTGCCTTTTAGTTCCCATGAT 58.584 39.130 0.00 0.00 0.00 2.45
4351 8285 4.220382 TGTTGCCTTTTAGTTCCCATGATG 59.780 41.667 0.00 0.00 0.00 3.07
4352 8286 4.314522 TGCCTTTTAGTTCCCATGATGA 57.685 40.909 0.00 0.00 0.00 2.92
4353 8287 4.671831 TGCCTTTTAGTTCCCATGATGAA 58.328 39.130 0.00 0.00 0.00 2.57
4354 8288 4.462483 TGCCTTTTAGTTCCCATGATGAAC 59.538 41.667 16.03 16.03 41.89 3.18
4385 8319 4.734652 GGGCTCCGATGGTTTTGA 57.265 55.556 0.00 0.00 0.00 2.69
4387 8321 0.322546 GGGCTCCGATGGTTTTGAGT 60.323 55.000 0.00 0.00 0.00 3.41
4388 8322 1.065709 GGGCTCCGATGGTTTTGAGTA 60.066 52.381 0.00 0.00 0.00 2.59
4403 8340 9.403583 TGGTTTTGAGTACTTCACTTTATTTCT 57.596 29.630 0.00 0.00 37.72 2.52
4416 8353 8.792830 TCACTTTATTTCTCCTTCTGTATTGG 57.207 34.615 0.00 0.00 0.00 3.16
4429 8366 6.039382 CCTTCTGTATTGGGTGGCTAAATAAC 59.961 42.308 0.00 0.00 0.00 1.89
4430 8367 6.321821 TCTGTATTGGGTGGCTAAATAACT 57.678 37.500 0.00 0.00 0.00 2.24
4431 8368 6.727394 TCTGTATTGGGTGGCTAAATAACTT 58.273 36.000 0.00 0.00 0.00 2.66
4432 8369 7.179269 TCTGTATTGGGTGGCTAAATAACTTT 58.821 34.615 0.00 0.00 0.00 2.66
4433 8370 7.122055 TCTGTATTGGGTGGCTAAATAACTTTG 59.878 37.037 0.00 0.00 0.00 2.77
4434 8371 6.722129 TGTATTGGGTGGCTAAATAACTTTGT 59.278 34.615 0.00 0.00 0.00 2.83
4435 8372 7.889073 TGTATTGGGTGGCTAAATAACTTTGTA 59.111 33.333 0.00 0.00 0.00 2.41
4436 8373 7.784470 ATTGGGTGGCTAAATAACTTTGTAA 57.216 32.000 0.00 0.00 0.00 2.41
4437 8374 7.784470 TTGGGTGGCTAAATAACTTTGTAAT 57.216 32.000 0.00 0.00 0.00 1.89
4438 8375 7.164230 TGGGTGGCTAAATAACTTTGTAATG 57.836 36.000 0.00 0.00 0.00 1.90
4439 8376 6.948886 TGGGTGGCTAAATAACTTTGTAATGA 59.051 34.615 0.00 0.00 0.00 2.57
4440 8377 7.617723 TGGGTGGCTAAATAACTTTGTAATGAT 59.382 33.333 0.00 0.00 0.00 2.45
4441 8378 8.474831 GGGTGGCTAAATAACTTTGTAATGATT 58.525 33.333 0.00 0.00 0.00 2.57
4442 8379 9.869757 GGTGGCTAAATAACTTTGTAATGATTT 57.130 29.630 0.00 0.00 0.00 2.17
4453 8390 9.480053 AACTTTGTAATGATTTCTTGAATGTGG 57.520 29.630 0.00 0.00 0.00 4.17
4454 8391 8.641541 ACTTTGTAATGATTTCTTGAATGTGGT 58.358 29.630 0.00 0.00 0.00 4.16
4455 8392 8.815141 TTTGTAATGATTTCTTGAATGTGGTG 57.185 30.769 0.00 0.00 0.00 4.17
4456 8393 6.389091 TGTAATGATTTCTTGAATGTGGTGC 58.611 36.000 0.00 0.00 0.00 5.01
4457 8394 5.471556 AATGATTTCTTGAATGTGGTGCA 57.528 34.783 0.00 0.00 0.00 4.57
4458 8395 5.670792 ATGATTTCTTGAATGTGGTGCAT 57.329 34.783 0.00 0.00 40.03 3.96
4459 8396 5.063180 TGATTTCTTGAATGTGGTGCATC 57.937 39.130 0.00 0.00 36.67 3.91
4460 8397 4.768448 TGATTTCTTGAATGTGGTGCATCT 59.232 37.500 0.00 0.00 36.67 2.90
4461 8398 5.244402 TGATTTCTTGAATGTGGTGCATCTT 59.756 36.000 0.00 0.00 36.67 2.40
4462 8399 4.508461 TTCTTGAATGTGGTGCATCTTG 57.492 40.909 0.00 0.00 36.67 3.02
4463 8400 3.753815 TCTTGAATGTGGTGCATCTTGA 58.246 40.909 0.00 0.00 36.67 3.02
4464 8401 4.338012 TCTTGAATGTGGTGCATCTTGAT 58.662 39.130 0.00 0.00 36.67 2.57
4465 8402 4.768448 TCTTGAATGTGGTGCATCTTGATT 59.232 37.500 0.00 0.00 36.67 2.57
4466 8403 4.707030 TGAATGTGGTGCATCTTGATTC 57.293 40.909 0.00 4.07 36.67 2.52
4467 8404 4.338012 TGAATGTGGTGCATCTTGATTCT 58.662 39.130 13.70 0.00 36.67 2.40
4468 8405 4.768448 TGAATGTGGTGCATCTTGATTCTT 59.232 37.500 13.70 0.00 36.67 2.52
4469 8406 4.713824 ATGTGGTGCATCTTGATTCTTG 57.286 40.909 0.00 0.00 30.67 3.02
4470 8407 3.753815 TGTGGTGCATCTTGATTCTTGA 58.246 40.909 0.00 0.00 0.00 3.02
4471 8408 4.338012 TGTGGTGCATCTTGATTCTTGAT 58.662 39.130 0.00 0.00 0.00 2.57
4472 8409 4.157105 TGTGGTGCATCTTGATTCTTGATG 59.843 41.667 0.00 12.11 40.16 3.07
4473 8410 3.697542 TGGTGCATCTTGATTCTTGATGG 59.302 43.478 15.75 4.46 38.30 3.51
4474 8411 3.698040 GGTGCATCTTGATTCTTGATGGT 59.302 43.478 15.75 0.00 38.30 3.55
4475 8412 4.159135 GGTGCATCTTGATTCTTGATGGTT 59.841 41.667 15.75 0.00 38.30 3.67
4476 8413 5.100259 GTGCATCTTGATTCTTGATGGTTG 58.900 41.667 15.75 0.51 38.30 3.77
4477 8414 5.011586 TGCATCTTGATTCTTGATGGTTGA 58.988 37.500 15.75 0.00 38.30 3.18
4478 8415 5.477637 TGCATCTTGATTCTTGATGGTTGAA 59.522 36.000 15.75 0.00 38.30 2.69
4479 8416 6.015265 TGCATCTTGATTCTTGATGGTTGAAA 60.015 34.615 15.75 0.00 38.30 2.69
4480 8417 6.309737 GCATCTTGATTCTTGATGGTTGAAAC 59.690 38.462 15.75 0.00 38.30 2.78
4481 8418 7.600065 CATCTTGATTCTTGATGGTTGAAACT 58.400 34.615 9.87 0.00 35.32 2.66
4482 8419 7.587037 TCTTGATTCTTGATGGTTGAAACTT 57.413 32.000 0.00 0.00 0.00 2.66
4483 8420 7.651808 TCTTGATTCTTGATGGTTGAAACTTC 58.348 34.615 0.00 0.00 0.00 3.01
4484 8421 6.957920 TGATTCTTGATGGTTGAAACTTCA 57.042 33.333 0.00 0.00 34.92 3.02
4485 8422 7.345422 TGATTCTTGATGGTTGAAACTTCAA 57.655 32.000 10.55 10.55 44.31 2.69
4498 8435 7.523293 TTGAAACTTCAAAGGCTCATAATGA 57.477 32.000 2.38 0.00 43.62 2.57
4499 8436 7.523293 TGAAACTTCAAAGGCTCATAATGAA 57.477 32.000 0.00 0.00 33.55 2.57
4500 8437 7.950512 TGAAACTTCAAAGGCTCATAATGAAA 58.049 30.769 0.00 0.00 33.55 2.69
4501 8438 8.084073 TGAAACTTCAAAGGCTCATAATGAAAG 58.916 33.333 0.00 0.00 33.55 2.62
4502 8439 7.765695 AACTTCAAAGGCTCATAATGAAAGA 57.234 32.000 0.00 0.00 30.37 2.52
4503 8440 7.765695 ACTTCAAAGGCTCATAATGAAAGAA 57.234 32.000 0.00 0.00 30.37 2.52
4504 8441 8.358582 ACTTCAAAGGCTCATAATGAAAGAAT 57.641 30.769 0.00 0.00 30.37 2.40
4505 8442 8.810041 ACTTCAAAGGCTCATAATGAAAGAATT 58.190 29.630 0.00 0.00 30.37 2.17
4506 8443 9.649167 CTTCAAAGGCTCATAATGAAAGAATTT 57.351 29.630 0.00 0.00 43.98 1.82
4508 8445 9.643693 TCAAAGGCTCATAATGAAAGAATTTTC 57.356 29.630 0.00 0.00 39.27 2.29
4509 8446 9.649167 CAAAGGCTCATAATGAAAGAATTTTCT 57.351 29.630 0.00 0.00 39.27 2.52
4530 8467 9.829507 TTTTCTATTCTGAAAAGAAAATTGCCA 57.170 25.926 5.59 0.00 41.74 4.92
4531 8468 8.816640 TTCTATTCTGAAAAGAAAATTGCCAC 57.183 30.769 0.00 0.00 0.00 5.01
4532 8469 7.950512 TCTATTCTGAAAAGAAAATTGCCACA 58.049 30.769 0.00 0.00 0.00 4.17
4533 8470 8.587608 TCTATTCTGAAAAGAAAATTGCCACAT 58.412 29.630 0.00 0.00 0.00 3.21
4534 8471 9.859427 CTATTCTGAAAAGAAAATTGCCACATA 57.141 29.630 0.00 0.00 0.00 2.29
4535 8472 8.767478 ATTCTGAAAAGAAAATTGCCACATAG 57.233 30.769 0.00 0.00 0.00 2.23
4536 8473 7.288810 TCTGAAAAGAAAATTGCCACATAGT 57.711 32.000 0.00 0.00 0.00 2.12
4537 8474 7.147312 TCTGAAAAGAAAATTGCCACATAGTG 58.853 34.615 0.00 0.00 0.00 2.74
4553 8490 7.807977 CACATAGTGGTGCTAAGGATAATTT 57.192 36.000 0.00 0.00 32.72 1.82
4554 8491 8.902540 CACATAGTGGTGCTAAGGATAATTTA 57.097 34.615 0.00 0.00 32.72 1.40
4555 8492 8.993121 CACATAGTGGTGCTAAGGATAATTTAG 58.007 37.037 0.00 0.00 32.72 1.85
4556 8493 8.714906 ACATAGTGGTGCTAAGGATAATTTAGT 58.285 33.333 0.00 0.00 32.72 2.24
4585 8522 7.649057 AGAACTTCACAGTTGTTATTTTAGGC 58.351 34.615 0.00 0.00 43.79 3.93
4586 8523 7.502561 AGAACTTCACAGTTGTTATTTTAGGCT 59.497 33.333 0.00 0.00 43.79 4.58
4587 8524 7.582667 ACTTCACAGTTGTTATTTTAGGCTT 57.417 32.000 0.00 0.00 0.00 4.35
4588 8525 7.425606 ACTTCACAGTTGTTATTTTAGGCTTG 58.574 34.615 0.00 0.00 0.00 4.01
4589 8526 5.768317 TCACAGTTGTTATTTTAGGCTTGC 58.232 37.500 0.00 0.00 0.00 4.01
4590 8527 5.300539 TCACAGTTGTTATTTTAGGCTTGCA 59.699 36.000 0.00 0.00 0.00 4.08
4591 8528 5.982516 CACAGTTGTTATTTTAGGCTTGCAA 59.017 36.000 0.00 0.00 0.00 4.08
4592 8529 5.983118 ACAGTTGTTATTTTAGGCTTGCAAC 59.017 36.000 0.00 0.00 36.28 4.17
4593 8530 5.405269 CAGTTGTTATTTTAGGCTTGCAACC 59.595 40.000 0.00 2.18 36.58 3.77
4594 8531 5.304357 AGTTGTTATTTTAGGCTTGCAACCT 59.696 36.000 19.86 19.86 41.57 3.50
4595 8532 6.492087 AGTTGTTATTTTAGGCTTGCAACCTA 59.508 34.615 18.27 18.27 38.81 3.08
4596 8533 6.902771 TGTTATTTTAGGCTTGCAACCTAA 57.097 33.333 24.58 24.58 45.82 2.69
4597 8534 7.475137 TGTTATTTTAGGCTTGCAACCTAAT 57.525 32.000 26.88 20.72 46.51 1.73
4598 8535 8.582657 TGTTATTTTAGGCTTGCAACCTAATA 57.417 30.769 26.88 23.97 46.51 0.98
4599 8536 9.026121 TGTTATTTTAGGCTTGCAACCTAATAA 57.974 29.630 26.88 22.78 46.51 1.40
4600 8537 9.863845 GTTATTTTAGGCTTGCAACCTAATAAA 57.136 29.630 26.88 22.04 46.51 1.40
4601 8538 9.863845 TTATTTTAGGCTTGCAACCTAATAAAC 57.136 29.630 26.88 0.00 46.51 2.01
4602 8539 6.902771 TTTAGGCTTGCAACCTAATAAACA 57.097 33.333 26.88 16.51 46.51 2.83
4603 8540 7.475137 TTTAGGCTTGCAACCTAATAAACAT 57.525 32.000 26.88 7.94 46.51 2.71
4604 8541 7.475137 TTAGGCTTGCAACCTAATAAACATT 57.525 32.000 24.58 5.80 43.31 2.71
4605 8542 5.965922 AGGCTTGCAACCTAATAAACATTC 58.034 37.500 16.08 0.00 35.10 2.67
4606 8543 5.480073 AGGCTTGCAACCTAATAAACATTCA 59.520 36.000 16.08 0.00 35.10 2.57
4607 8544 5.576774 GGCTTGCAACCTAATAAACATTCAC 59.423 40.000 0.00 0.00 0.00 3.18
4608 8545 5.286082 GCTTGCAACCTAATAAACATTCACG 59.714 40.000 0.00 0.00 0.00 4.35
4609 8546 5.303747 TGCAACCTAATAAACATTCACGG 57.696 39.130 0.00 0.00 0.00 4.94
4610 8547 4.762765 TGCAACCTAATAAACATTCACGGT 59.237 37.500 0.00 0.00 0.00 4.83
4611 8548 5.106475 TGCAACCTAATAAACATTCACGGTC 60.106 40.000 0.00 0.00 0.00 4.79
4612 8549 5.123344 GCAACCTAATAAACATTCACGGTCT 59.877 40.000 0.00 0.00 0.00 3.85
4613 8550 6.674760 GCAACCTAATAAACATTCACGGTCTC 60.675 42.308 0.00 0.00 0.00 3.36
4614 8551 6.295719 ACCTAATAAACATTCACGGTCTCT 57.704 37.500 0.00 0.00 0.00 3.10
4615 8552 7.414222 ACCTAATAAACATTCACGGTCTCTA 57.586 36.000 0.00 0.00 0.00 2.43
4616 8553 7.263496 ACCTAATAAACATTCACGGTCTCTAC 58.737 38.462 0.00 0.00 0.00 2.59
4617 8554 7.093640 ACCTAATAAACATTCACGGTCTCTACA 60.094 37.037 0.00 0.00 0.00 2.74
4618 8555 7.435488 CCTAATAAACATTCACGGTCTCTACAG 59.565 40.741 0.00 0.00 0.00 2.74
4619 8556 4.602340 AAACATTCACGGTCTCTACAGT 57.398 40.909 0.00 0.00 34.05 3.55
4620 8557 4.602340 AACATTCACGGTCTCTACAGTT 57.398 40.909 0.00 0.00 31.11 3.16
4621 8558 4.602340 ACATTCACGGTCTCTACAGTTT 57.398 40.909 0.00 0.00 31.11 2.66
4622 8559 5.717078 ACATTCACGGTCTCTACAGTTTA 57.283 39.130 0.00 0.00 31.11 2.01
4623 8560 5.710984 ACATTCACGGTCTCTACAGTTTAG 58.289 41.667 0.00 0.00 31.11 1.85
4624 8561 5.475909 ACATTCACGGTCTCTACAGTTTAGA 59.524 40.000 0.00 0.00 31.11 2.10
4625 8562 5.624344 TTCACGGTCTCTACAGTTTAGAG 57.376 43.478 6.96 6.96 41.72 2.43
4626 8563 3.439476 TCACGGTCTCTACAGTTTAGAGC 59.561 47.826 8.26 4.42 40.52 4.09
4627 8564 3.440872 CACGGTCTCTACAGTTTAGAGCT 59.559 47.826 8.26 0.00 40.52 4.09
4628 8565 4.634883 CACGGTCTCTACAGTTTAGAGCTA 59.365 45.833 8.26 0.00 40.52 3.32
4629 8566 4.877251 ACGGTCTCTACAGTTTAGAGCTAG 59.123 45.833 8.26 4.89 40.52 3.42
4630 8567 5.117584 CGGTCTCTACAGTTTAGAGCTAGA 58.882 45.833 8.26 0.00 40.52 2.43
4631 8568 5.006941 CGGTCTCTACAGTTTAGAGCTAGAC 59.993 48.000 8.26 2.59 40.52 2.59
4632 8569 5.881443 GGTCTCTACAGTTTAGAGCTAGACA 59.119 44.000 8.26 0.00 40.52 3.41
4633 8570 6.374894 GGTCTCTACAGTTTAGAGCTAGACAA 59.625 42.308 8.26 0.00 40.52 3.18
4634 8571 7.067737 GGTCTCTACAGTTTAGAGCTAGACAAT 59.932 40.741 8.26 0.00 40.52 2.71
4635 8572 8.126700 GTCTCTACAGTTTAGAGCTAGACAATC 58.873 40.741 8.26 0.00 40.52 2.67
4636 8573 7.829706 TCTCTACAGTTTAGAGCTAGACAATCA 59.170 37.037 8.26 0.00 40.52 2.57
4637 8574 8.349568 TCTACAGTTTAGAGCTAGACAATCAA 57.650 34.615 0.00 0.00 0.00 2.57
4638 8575 8.462811 TCTACAGTTTAGAGCTAGACAATCAAG 58.537 37.037 0.00 0.00 0.00 3.02
4639 8576 7.233389 ACAGTTTAGAGCTAGACAATCAAGA 57.767 36.000 0.00 0.00 0.00 3.02
4640 8577 7.319646 ACAGTTTAGAGCTAGACAATCAAGAG 58.680 38.462 0.00 0.00 0.00 2.85
4641 8578 6.756074 CAGTTTAGAGCTAGACAATCAAGAGG 59.244 42.308 0.00 0.00 0.00 3.69
4642 8579 6.439058 AGTTTAGAGCTAGACAATCAAGAGGT 59.561 38.462 0.00 0.00 0.00 3.85
4643 8580 7.616150 AGTTTAGAGCTAGACAATCAAGAGGTA 59.384 37.037 0.00 0.00 0.00 3.08
4644 8581 7.956328 TTAGAGCTAGACAATCAAGAGGTAA 57.044 36.000 0.00 0.00 0.00 2.85
4645 8582 6.215495 AGAGCTAGACAATCAAGAGGTAAC 57.785 41.667 0.00 0.00 0.00 2.50
4646 8583 5.128008 AGAGCTAGACAATCAAGAGGTAACC 59.872 44.000 0.00 0.00 37.17 2.85
4647 8584 4.777896 AGCTAGACAATCAAGAGGTAACCA 59.222 41.667 0.00 0.00 37.17 3.67
4648 8585 4.870991 GCTAGACAATCAAGAGGTAACCAC 59.129 45.833 0.00 0.00 37.17 4.16
4649 8586 3.926616 AGACAATCAAGAGGTAACCACG 58.073 45.455 0.00 0.00 37.17 4.94
4650 8587 3.576982 AGACAATCAAGAGGTAACCACGA 59.423 43.478 0.00 0.00 37.17 4.35
4651 8588 3.926616 ACAATCAAGAGGTAACCACGAG 58.073 45.455 0.00 0.00 37.17 4.18
4652 8589 3.323979 ACAATCAAGAGGTAACCACGAGT 59.676 43.478 0.00 0.00 37.17 4.18
4653 8590 3.870633 ATCAAGAGGTAACCACGAGTC 57.129 47.619 0.00 0.00 37.17 3.36
4654 8591 1.891150 TCAAGAGGTAACCACGAGTCC 59.109 52.381 0.00 0.00 37.17 3.85
4655 8592 1.616865 CAAGAGGTAACCACGAGTCCA 59.383 52.381 0.00 0.00 37.17 4.02
4656 8593 2.005370 AGAGGTAACCACGAGTCCAA 57.995 50.000 0.00 0.00 37.17 3.53
4657 8594 2.322658 AGAGGTAACCACGAGTCCAAA 58.677 47.619 0.00 0.00 37.17 3.28
4658 8595 2.299297 AGAGGTAACCACGAGTCCAAAG 59.701 50.000 0.00 0.00 37.17 2.77
4659 8596 2.298163 GAGGTAACCACGAGTCCAAAGA 59.702 50.000 0.00 0.00 37.17 2.52
4660 8597 2.036862 AGGTAACCACGAGTCCAAAGAC 59.963 50.000 0.00 0.00 39.93 3.01
4673 8610 5.613358 GTCCAAAGACTTCGTCATCAATT 57.387 39.130 0.00 0.00 40.10 2.32
4674 8611 6.002062 GTCCAAAGACTTCGTCATCAATTT 57.998 37.500 0.00 0.00 40.10 1.82
4675 8612 6.438763 GTCCAAAGACTTCGTCATCAATTTT 58.561 36.000 0.00 0.00 40.10 1.82
4676 8613 6.360681 GTCCAAAGACTTCGTCATCAATTTTG 59.639 38.462 0.00 0.00 40.10 2.44
4677 8614 6.039270 TCCAAAGACTTCGTCATCAATTTTGT 59.961 34.615 0.00 0.00 34.60 2.83
4678 8615 6.142798 CCAAAGACTTCGTCATCAATTTTGTG 59.857 38.462 0.00 0.00 34.60 3.33
4679 8616 4.787598 AGACTTCGTCATCAATTTTGTGC 58.212 39.130 0.00 0.00 34.60 4.57
4680 8617 4.275689 AGACTTCGTCATCAATTTTGTGCA 59.724 37.500 0.00 0.00 34.60 4.57
4681 8618 4.930963 ACTTCGTCATCAATTTTGTGCAA 58.069 34.783 0.00 0.00 0.00 4.08
4682 8619 5.347342 ACTTCGTCATCAATTTTGTGCAAA 58.653 33.333 0.00 0.00 0.00 3.68
4683 8620 5.231991 ACTTCGTCATCAATTTTGTGCAAAC 59.768 36.000 0.00 0.00 0.00 2.93
4684 8621 4.930963 TCGTCATCAATTTTGTGCAAACT 58.069 34.783 0.00 0.00 0.00 2.66
4685 8622 4.739228 TCGTCATCAATTTTGTGCAAACTG 59.261 37.500 0.00 0.00 0.00 3.16
4686 8623 4.503734 CGTCATCAATTTTGTGCAAACTGT 59.496 37.500 0.00 0.00 0.00 3.55
4687 8624 5.005586 CGTCATCAATTTTGTGCAAACTGTT 59.994 36.000 0.00 0.00 0.00 3.16
4688 8625 6.455380 CGTCATCAATTTTGTGCAAACTGTTT 60.455 34.615 0.00 0.00 0.00 2.83
4689 8626 7.253917 CGTCATCAATTTTGTGCAAACTGTTTA 60.254 33.333 5.31 0.00 0.00 2.01
4690 8627 8.057742 GTCATCAATTTTGTGCAAACTGTTTAG 58.942 33.333 5.31 2.35 0.00 1.85
4691 8628 7.763528 TCATCAATTTTGTGCAAACTGTTTAGT 59.236 29.630 5.31 0.00 39.32 2.24
4692 8629 9.029243 CATCAATTTTGTGCAAACTGTTTAGTA 57.971 29.630 5.31 0.00 35.69 1.82
4693 8630 9.762933 ATCAATTTTGTGCAAACTGTTTAGTAT 57.237 25.926 5.31 0.00 35.69 2.12
4699 8636 9.724839 TTTGTGCAAACTGTTTAGTATAAAGTC 57.275 29.630 5.31 0.00 35.69 3.01
4700 8637 7.867752 TGTGCAAACTGTTTAGTATAAAGTCC 58.132 34.615 5.31 0.00 35.69 3.85
4701 8638 7.013529 GTGCAAACTGTTTAGTATAAAGTCCG 58.986 38.462 5.31 0.00 35.69 4.79
4702 8639 6.148150 TGCAAACTGTTTAGTATAAAGTCCGG 59.852 38.462 5.31 0.00 35.69 5.14
4703 8640 6.540205 CAAACTGTTTAGTATAAAGTCCGGC 58.460 40.000 5.31 0.00 35.69 6.13
4704 8641 4.763073 ACTGTTTAGTATAAAGTCCGGCC 58.237 43.478 0.00 0.00 34.74 6.13
4705 8642 3.784338 TGTTTAGTATAAAGTCCGGCCG 58.216 45.455 21.04 21.04 0.00 6.13
4706 8643 2.514205 TTAGTATAAAGTCCGGCCGC 57.486 50.000 22.85 7.25 0.00 6.53
4707 8644 0.675633 TAGTATAAAGTCCGGCCGCC 59.324 55.000 22.85 12.78 0.00 6.13
4708 8645 1.047034 AGTATAAAGTCCGGCCGCCT 61.047 55.000 22.85 15.21 0.00 5.52
4709 8646 0.599466 GTATAAAGTCCGGCCGCCTC 60.599 60.000 22.85 12.06 0.00 4.70
4710 8647 0.757935 TATAAAGTCCGGCCGCCTCT 60.758 55.000 22.85 14.33 0.00 3.69
4711 8648 2.029307 ATAAAGTCCGGCCGCCTCTC 62.029 60.000 22.85 7.39 0.00 3.20
4714 8651 3.224324 GTCCGGCCGCCTCTCATA 61.224 66.667 22.85 0.00 0.00 2.15
4715 8652 2.912542 TCCGGCCGCCTCTCATAG 60.913 66.667 22.85 2.11 0.00 2.23
4716 8653 3.227276 CCGGCCGCCTCTCATAGT 61.227 66.667 22.85 0.00 0.00 2.12
4717 8654 2.797278 CCGGCCGCCTCTCATAGTT 61.797 63.158 22.85 0.00 0.00 2.24
4718 8655 1.300233 CGGCCGCCTCTCATAGTTC 60.300 63.158 14.67 0.00 0.00 3.01
4719 8656 1.300233 GGCCGCCTCTCATAGTTCG 60.300 63.158 0.71 0.00 0.00 3.95
4720 8657 1.300233 GCCGCCTCTCATAGTTCGG 60.300 63.158 0.00 0.00 40.44 4.30
4721 8658 1.735376 GCCGCCTCTCATAGTTCGGA 61.735 60.000 2.41 0.00 40.11 4.55
4722 8659 0.030908 CCGCCTCTCATAGTTCGGAC 59.969 60.000 0.00 0.00 40.11 4.79
4723 8660 1.025812 CGCCTCTCATAGTTCGGACT 58.974 55.000 0.00 0.00 39.97 3.85
4724 8661 1.405821 CGCCTCTCATAGTTCGGACTT 59.594 52.381 0.00 0.00 37.33 3.01
4725 8662 2.159226 CGCCTCTCATAGTTCGGACTTT 60.159 50.000 0.00 0.00 37.33 2.66
4726 8663 3.676324 CGCCTCTCATAGTTCGGACTTTT 60.676 47.826 0.00 0.00 37.33 2.27
4727 8664 3.619038 GCCTCTCATAGTTCGGACTTTTG 59.381 47.826 0.00 0.34 37.33 2.44
4728 8665 4.184629 CCTCTCATAGTTCGGACTTTTGG 58.815 47.826 0.00 0.00 37.33 3.28
4729 8666 4.322801 CCTCTCATAGTTCGGACTTTTGGT 60.323 45.833 0.00 0.00 37.33 3.67
4730 8667 5.223449 TCTCATAGTTCGGACTTTTGGTT 57.777 39.130 0.00 0.00 37.33 3.67
4731 8668 4.994852 TCTCATAGTTCGGACTTTTGGTTG 59.005 41.667 0.00 0.00 37.33 3.77
4732 8669 4.710324 TCATAGTTCGGACTTTTGGTTGT 58.290 39.130 0.00 0.00 37.33 3.32
4733 8670 4.513692 TCATAGTTCGGACTTTTGGTTGTG 59.486 41.667 0.00 0.00 37.33 3.33
4734 8671 2.718563 AGTTCGGACTTTTGGTTGTGT 58.281 42.857 0.00 0.00 29.87 3.72
4735 8672 3.086282 AGTTCGGACTTTTGGTTGTGTT 58.914 40.909 0.00 0.00 29.87 3.32
4736 8673 3.119637 AGTTCGGACTTTTGGTTGTGTTG 60.120 43.478 0.00 0.00 29.87 3.33
4737 8674 1.133407 TCGGACTTTTGGTTGTGTTGC 59.867 47.619 0.00 0.00 0.00 4.17
4738 8675 1.801025 CGGACTTTTGGTTGTGTTGCC 60.801 52.381 0.00 0.00 0.00 4.52
4739 8676 1.480545 GGACTTTTGGTTGTGTTGCCT 59.519 47.619 0.00 0.00 0.00 4.75
4740 8677 2.691011 GGACTTTTGGTTGTGTTGCCTA 59.309 45.455 0.00 0.00 0.00 3.93
4741 8678 3.243401 GGACTTTTGGTTGTGTTGCCTAG 60.243 47.826 0.00 0.00 0.00 3.02
4742 8679 3.361786 ACTTTTGGTTGTGTTGCCTAGT 58.638 40.909 0.00 0.00 0.00 2.57
4743 8680 3.130340 ACTTTTGGTTGTGTTGCCTAGTG 59.870 43.478 0.00 0.00 0.00 2.74
4744 8681 1.028905 TTGGTTGTGTTGCCTAGTGC 58.971 50.000 0.00 0.00 41.77 4.40
4756 8693 3.682372 GCCTAGTGCATGAAGCTTAAC 57.318 47.619 0.00 0.00 45.94 2.01
4757 8694 3.009723 GCCTAGTGCATGAAGCTTAACA 58.990 45.455 0.00 0.00 45.94 2.41
4758 8695 3.181506 GCCTAGTGCATGAAGCTTAACAC 60.182 47.826 0.00 5.74 45.94 3.32
4759 8696 4.002982 CCTAGTGCATGAAGCTTAACACA 58.997 43.478 17.65 5.87 45.94 3.72
4760 8697 4.455533 CCTAGTGCATGAAGCTTAACACAA 59.544 41.667 17.65 0.00 45.94 3.33
4761 8698 4.916983 AGTGCATGAAGCTTAACACAAA 57.083 36.364 17.65 0.00 45.94 2.83
4762 8699 4.610945 AGTGCATGAAGCTTAACACAAAC 58.389 39.130 17.65 5.23 45.94 2.93
4763 8700 3.735746 GTGCATGAAGCTTAACACAAACC 59.264 43.478 0.00 0.00 45.94 3.27
4764 8701 2.979813 GCATGAAGCTTAACACAAACCG 59.020 45.455 0.00 0.00 41.15 4.44
4765 8702 2.766970 TGAAGCTTAACACAAACCGC 57.233 45.000 0.00 0.00 0.00 5.68
4766 8703 2.294074 TGAAGCTTAACACAAACCGCT 58.706 42.857 0.00 0.00 0.00 5.52
4767 8704 2.289547 TGAAGCTTAACACAAACCGCTC 59.710 45.455 0.00 0.00 0.00 5.03
4768 8705 1.961793 AGCTTAACACAAACCGCTCA 58.038 45.000 0.00 0.00 0.00 4.26
4769 8706 1.602377 AGCTTAACACAAACCGCTCAC 59.398 47.619 0.00 0.00 0.00 3.51
4770 8707 1.334689 GCTTAACACAAACCGCTCACC 60.335 52.381 0.00 0.00 0.00 4.02
4771 8708 2.218603 CTTAACACAAACCGCTCACCT 58.781 47.619 0.00 0.00 0.00 4.00
4772 8709 1.588674 TAACACAAACCGCTCACCTG 58.411 50.000 0.00 0.00 0.00 4.00
4773 8710 1.724582 AACACAAACCGCTCACCTGC 61.725 55.000 0.00 0.00 0.00 4.85
4774 8711 2.186160 CACAAACCGCTCACCTGCA 61.186 57.895 0.00 0.00 0.00 4.41
4775 8712 1.453015 ACAAACCGCTCACCTGCAA 60.453 52.632 0.00 0.00 0.00 4.08
4776 8713 0.823356 ACAAACCGCTCACCTGCAAT 60.823 50.000 0.00 0.00 0.00 3.56
4777 8714 0.109597 CAAACCGCTCACCTGCAATC 60.110 55.000 0.00 0.00 0.00 2.67
4778 8715 1.577328 AAACCGCTCACCTGCAATCG 61.577 55.000 0.00 0.00 0.00 3.34
4779 8716 2.434884 CCGCTCACCTGCAATCGT 60.435 61.111 0.00 0.00 0.00 3.73
4780 8717 2.456119 CCGCTCACCTGCAATCGTC 61.456 63.158 0.00 0.00 0.00 4.20
4781 8718 2.456119 CGCTCACCTGCAATCGTCC 61.456 63.158 0.00 0.00 0.00 4.79
4782 8719 1.078848 GCTCACCTGCAATCGTCCT 60.079 57.895 0.00 0.00 0.00 3.85
4783 8720 0.674895 GCTCACCTGCAATCGTCCTT 60.675 55.000 0.00 0.00 0.00 3.36
4784 8721 1.081892 CTCACCTGCAATCGTCCTTG 58.918 55.000 0.00 0.00 0.00 3.61
4790 8727 3.984292 GCAATCGTCCTTGCTCAAG 57.016 52.632 11.14 2.74 46.32 3.02
4791 8728 1.160137 GCAATCGTCCTTGCTCAAGT 58.840 50.000 8.60 0.00 46.32 3.16
4792 8729 1.129437 GCAATCGTCCTTGCTCAAGTC 59.871 52.381 8.60 1.67 46.32 3.01
4793 8730 2.693069 CAATCGTCCTTGCTCAAGTCT 58.307 47.619 8.60 0.00 36.72 3.24
4794 8731 2.663826 ATCGTCCTTGCTCAAGTCTC 57.336 50.000 8.60 0.00 36.72 3.36
4795 8732 1.621992 TCGTCCTTGCTCAAGTCTCT 58.378 50.000 8.60 0.00 36.72 3.10
4796 8733 2.791655 TCGTCCTTGCTCAAGTCTCTA 58.208 47.619 8.60 0.00 36.72 2.43
4797 8734 2.488545 TCGTCCTTGCTCAAGTCTCTAC 59.511 50.000 8.60 0.00 36.72 2.59
4798 8735 2.416162 CGTCCTTGCTCAAGTCTCTACC 60.416 54.545 8.60 0.00 36.72 3.18
4799 8736 2.563179 GTCCTTGCTCAAGTCTCTACCA 59.437 50.000 8.60 0.00 36.72 3.25
4800 8737 2.828520 TCCTTGCTCAAGTCTCTACCAG 59.171 50.000 8.60 0.00 36.72 4.00
4801 8738 2.615869 CTTGCTCAAGTCTCTACCAGC 58.384 52.381 1.61 0.00 33.87 4.85
4802 8739 0.898320 TGCTCAAGTCTCTACCAGCC 59.102 55.000 0.00 0.00 0.00 4.85
4803 8740 0.898320 GCTCAAGTCTCTACCAGCCA 59.102 55.000 0.00 0.00 0.00 4.75
4804 8741 1.276421 GCTCAAGTCTCTACCAGCCAA 59.724 52.381 0.00 0.00 0.00 4.52
4805 8742 2.289694 GCTCAAGTCTCTACCAGCCAAA 60.290 50.000 0.00 0.00 0.00 3.28
4806 8743 3.807209 GCTCAAGTCTCTACCAGCCAAAA 60.807 47.826 0.00 0.00 0.00 2.44
4807 8744 3.999663 CTCAAGTCTCTACCAGCCAAAAG 59.000 47.826 0.00 0.00 0.00 2.27
4808 8745 3.646162 TCAAGTCTCTACCAGCCAAAAGA 59.354 43.478 0.00 0.00 0.00 2.52
4809 8746 4.102524 TCAAGTCTCTACCAGCCAAAAGAA 59.897 41.667 0.00 0.00 0.00 2.52
4810 8747 4.917906 AGTCTCTACCAGCCAAAAGAAT 57.082 40.909 0.00 0.00 0.00 2.40
4811 8748 4.583871 AGTCTCTACCAGCCAAAAGAATG 58.416 43.478 0.00 0.00 0.00 2.67
4812 8749 4.287067 AGTCTCTACCAGCCAAAAGAATGA 59.713 41.667 0.00 0.00 0.00 2.57
4813 8750 4.393371 GTCTCTACCAGCCAAAAGAATGAC 59.607 45.833 0.00 0.00 0.00 3.06
4814 8751 4.041567 TCTCTACCAGCCAAAAGAATGACA 59.958 41.667 0.00 0.00 0.00 3.58
4815 8752 4.072131 TCTACCAGCCAAAAGAATGACAC 58.928 43.478 0.00 0.00 0.00 3.67
4816 8753 2.665165 ACCAGCCAAAAGAATGACACA 58.335 42.857 0.00 0.00 0.00 3.72
4817 8754 2.624838 ACCAGCCAAAAGAATGACACAG 59.375 45.455 0.00 0.00 0.00 3.66
4818 8755 2.624838 CCAGCCAAAAGAATGACACAGT 59.375 45.455 0.00 0.00 0.00 3.55
4836 8773 1.897133 AGTCACACGGGTATACTTGCA 59.103 47.619 2.25 0.00 0.00 4.08
4837 8774 2.500098 AGTCACACGGGTATACTTGCAT 59.500 45.455 2.25 0.00 0.00 3.96
4839 8776 3.308866 GTCACACGGGTATACTTGCATTC 59.691 47.826 2.25 0.00 0.00 2.67
4849 8786 1.388547 ACTTGCATTCCGTTGTGTGT 58.611 45.000 0.00 0.00 0.00 3.72
4855 8792 2.083774 CATTCCGTTGTGTGTATGGCT 58.916 47.619 0.00 0.00 0.00 4.75
4856 8793 1.518325 TTCCGTTGTGTGTATGGCTG 58.482 50.000 0.00 0.00 0.00 4.85
4858 8795 0.605319 CCGTTGTGTGTATGGCTGGT 60.605 55.000 0.00 0.00 0.00 4.00
4860 8797 2.627945 CGTTGTGTGTATGGCTGGTAT 58.372 47.619 0.00 0.00 0.00 2.73
4888 8825 2.772077 ACACATTACCGGTACATGCA 57.228 45.000 24.55 10.14 0.00 3.96
4926 8867 4.096732 AGTGACTTCAGCAACACAAAAC 57.903 40.909 0.00 0.00 35.97 2.43
4954 8895 7.621428 TGAAGCTTACAGTATTCTACTACGT 57.379 36.000 0.00 0.00 37.23 3.57
4955 8896 8.722480 TGAAGCTTACAGTATTCTACTACGTA 57.278 34.615 0.00 0.00 37.23 3.57
4956 8897 8.607459 TGAAGCTTACAGTATTCTACTACGTAC 58.393 37.037 0.00 0.00 37.23 3.67
4957 8898 8.729805 AAGCTTACAGTATTCTACTACGTACT 57.270 34.615 0.00 0.00 37.23 2.73
4958 8899 8.729805 AGCTTACAGTATTCTACTACGTACTT 57.270 34.615 0.00 0.00 37.23 2.24
4959 8900 8.825745 AGCTTACAGTATTCTACTACGTACTTC 58.174 37.037 0.00 0.00 37.23 3.01
4960 8901 7.791590 GCTTACAGTATTCTACTACGTACTTCG 59.208 40.741 0.00 0.00 40.41 3.79
5012 8983 0.038744 CTGCCCCATGACTCACCTTT 59.961 55.000 0.00 0.00 0.00 3.11
5142 9113 5.536538 TGTATGTATGAGGTCTCTGACATCC 59.463 44.000 16.07 9.69 41.82 3.51
5144 9115 2.864885 ATGAGGTCTCTGACATCCCT 57.135 50.000 9.38 0.00 41.82 4.20
5149 9120 1.757699 GGTCTCTGACATCCCTGGTAC 59.242 57.143 0.00 0.00 33.68 3.34
5161 9132 3.233507 TCCCTGGTACGTTTAAGTGAGT 58.766 45.455 0.00 0.00 0.00 3.41
5162 9133 4.406456 TCCCTGGTACGTTTAAGTGAGTA 58.594 43.478 0.00 0.00 0.00 2.59
5193 9164 1.067212 GTGTGGTATCGATTCCTCGCT 59.933 52.381 22.05 0.00 44.65 4.93
5194 9165 1.067060 TGTGGTATCGATTCCTCGCTG 59.933 52.381 20.23 0.00 44.65 5.18
5195 9166 1.337071 GTGGTATCGATTCCTCGCTGA 59.663 52.381 20.23 0.00 44.65 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 106 2.685017 ATGGACCGCCTCTCAGCA 60.685 61.111 0.00 0.00 34.31 4.41
281 286 2.866762 GCTACCCAGAACAATTAGAGCG 59.133 50.000 0.00 0.00 0.00 5.03
347 358 8.099364 ACGTACATTCATTGACTCTCAAAAAT 57.901 30.769 0.00 0.00 40.12 1.82
370 381 2.120232 GAGCATGACGTCCTTCATACG 58.880 52.381 14.12 0.00 45.64 3.06
372 383 2.495669 TGTGAGCATGACGTCCTTCATA 59.504 45.455 14.12 7.02 34.29 2.15
374 385 0.678950 TGTGAGCATGACGTCCTTCA 59.321 50.000 14.12 8.54 0.00 3.02
375 386 1.337260 ACTGTGAGCATGACGTCCTTC 60.337 52.381 14.12 5.97 0.00 3.46
376 387 0.681733 ACTGTGAGCATGACGTCCTT 59.318 50.000 14.12 0.00 0.00 3.36
377 388 0.681733 AACTGTGAGCATGACGTCCT 59.318 50.000 14.12 2.34 0.00 3.85
378 389 1.071605 GAACTGTGAGCATGACGTCC 58.928 55.000 14.12 0.00 0.00 4.79
379 390 1.071605 GGAACTGTGAGCATGACGTC 58.928 55.000 9.11 9.11 0.00 4.34
440 1986 3.988379 AGCACCACAACACAACATAAG 57.012 42.857 0.00 0.00 0.00 1.73
454 2000 7.765695 ATTCTTCTTTAGAAATCAAGCACCA 57.234 32.000 0.00 0.00 45.62 4.17
494 2046 9.699410 AATGAAATATAATTTGACAGTCCTGGA 57.301 29.630 0.00 0.00 34.19 3.86
548 2108 6.403092 GCAACACTACAAAGGCAACAAATTTT 60.403 34.615 0.00 0.00 41.41 1.82
585 2147 1.336795 GGCCATTTCAACCTGGAAACG 60.337 52.381 0.00 0.00 39.40 3.60
768 2340 3.869065 TCCCAGATAAACGAACCATCAC 58.131 45.455 0.00 0.00 0.00 3.06
770 2342 2.872858 GCTCCCAGATAAACGAACCATC 59.127 50.000 0.00 0.00 0.00 3.51
879 2451 4.660168 ACCCGAGAGTACTCTTTGAACTA 58.340 43.478 25.86 0.00 40.61 2.24
908 2480 3.973206 TCAAACGTCTGGGACACATAT 57.027 42.857 0.00 0.00 32.09 1.78
1031 2603 7.510675 AAGATGATTAGGACCTTCTTACCAA 57.489 36.000 0.00 0.00 0.00 3.67
1056 2628 0.698238 CCCTTTCCCACAGGTCATCA 59.302 55.000 0.00 0.00 0.00 3.07
1071 2643 3.662759 TCCAACTCAGTTTGTTCCCTT 57.337 42.857 0.00 0.00 0.00 3.95
1081 2653 9.918630 CATATTCTTCAATTTTTCCAACTCAGT 57.081 29.630 0.00 0.00 0.00 3.41
1248 2826 5.350091 GTCAGTTCTAGCATCAAAGGAAGTC 59.650 44.000 0.00 0.00 0.00 3.01
1511 3089 6.267471 ACCTTTTGGAAAGATTGCACAATAGA 59.733 34.615 2.15 0.00 44.07 1.98
1601 3179 4.233632 TGTTGATTGTAGGATGATGCCA 57.766 40.909 0.00 0.00 0.00 4.92
1819 4624 1.368641 CATCATCGGGAAAGTTGCGA 58.631 50.000 0.00 0.00 0.00 5.10
1825 4630 4.712476 AGAGAAATCCATCATCGGGAAAG 58.288 43.478 0.00 0.00 38.09 2.62
2098 5368 1.229428 CGCATATCGGCAGGTTTGAT 58.771 50.000 0.00 0.00 33.78 2.57
2101 5371 1.095228 CCACGCATATCGGCAGGTTT 61.095 55.000 0.00 0.00 43.86 3.27
2117 5387 2.462456 TTCTGTGATCTGTCAGCCAC 57.538 50.000 14.50 14.50 34.36 5.01
2159 5495 0.179045 CCCTTATCTTGGCGAGTGGG 60.179 60.000 0.77 6.14 0.00 4.61
2206 5548 2.320745 TGCATCACGATCAAGCTGAT 57.679 45.000 0.00 0.00 40.34 2.90
2303 5645 3.614616 CGAGATACCTCAACTGTTTCAGC 59.385 47.826 0.00 0.00 39.39 4.26
2405 5765 6.408039 CACGTCGTGATAAATTCAAATACTGC 59.592 38.462 20.75 0.00 35.70 4.40
2426 5786 3.760035 CCTACGAGCCTGCCACGT 61.760 66.667 14.21 14.21 42.70 4.49
2429 5789 2.037367 AGTCCTACGAGCCTGCCA 59.963 61.111 0.00 0.00 0.00 4.92
2432 5792 1.888436 TTGGCAGTCCTACGAGCCTG 61.888 60.000 14.59 0.00 42.18 4.85
2435 5795 0.741221 CCTTTGGCAGTCCTACGAGC 60.741 60.000 0.00 0.00 0.00 5.03
2439 5799 2.027192 TCATGACCTTTGGCAGTCCTAC 60.027 50.000 0.00 0.00 31.76 3.18
2484 5844 5.297547 ACCGTGGCAGTGTGATATATTTAG 58.702 41.667 0.00 0.00 0.00 1.85
2583 6018 2.304180 AGTCATTCCAAGACAGGTCCAG 59.696 50.000 0.00 0.00 38.46 3.86
2589 6024 8.137437 ACAAAAACAATAGTCATTCCAAGACAG 58.863 33.333 0.00 0.00 38.46 3.51
2711 6165 2.836262 TGCAACAATCCAAAAAGCCTG 58.164 42.857 0.00 0.00 0.00 4.85
2862 6358 6.491745 TGTTTTTCCATCAACCTTATACAGCA 59.508 34.615 0.00 0.00 0.00 4.41
2865 6361 7.094377 GCTCTGTTTTTCCATCAACCTTATACA 60.094 37.037 0.00 0.00 0.00 2.29
3002 6498 7.442364 CAGTATGGAAATATGACACCCTTGTAG 59.558 40.741 0.00 0.00 35.47 2.74
3096 6595 1.079336 GGACGAGTGTTGGTAGGCC 60.079 63.158 0.00 0.00 0.00 5.19
3460 6959 7.472602 TCGCAATCGGAGATGGTTACATCAT 62.473 44.000 10.02 0.00 44.71 2.45
3558 7057 5.484715 CAACCATTCTGGCAGAATTTTCAT 58.515 37.500 34.13 18.60 41.90 2.57
3605 7104 7.831193 AGGAAGTTCATGCATATTAAGTTGAGT 59.169 33.333 0.00 0.00 0.00 3.41
3628 7127 5.935945 TGTTCTTGTCCAATTCTTGTAGGA 58.064 37.500 0.00 0.00 0.00 2.94
3635 7134 4.828939 TGCTTCATGTTCTTGTCCAATTCT 59.171 37.500 0.00 0.00 0.00 2.40
3708 7207 0.960364 CCTAACCATTGCGGCAGTGT 60.960 55.000 21.66 8.91 39.03 3.55
3794 7587 7.723616 TGAAGTTCTTGGAGGTTGATGATTAAA 59.276 33.333 4.17 0.00 0.00 1.52
3798 7591 5.246981 TGAAGTTCTTGGAGGTTGATGAT 57.753 39.130 4.17 0.00 0.00 2.45
3848 7719 3.181458 GGTTCACCTCTGACTTACACCAA 60.181 47.826 0.00 0.00 0.00 3.67
3881 7752 0.790814 CCTTTTCCTTGACGCGAGAC 59.209 55.000 15.93 4.24 0.00 3.36
3882 7753 0.391597 ACCTTTTCCTTGACGCGAGA 59.608 50.000 15.93 0.00 0.00 4.04
3886 7757 2.812011 ACATGTACCTTTTCCTTGACGC 59.188 45.455 0.00 0.00 0.00 5.19
3888 7759 6.262273 TGAAAGACATGTACCTTTTCCTTGAC 59.738 38.462 12.36 1.60 33.23 3.18
3998 7886 3.118482 TCCTCTGAATTAGAAGCTGCCAG 60.118 47.826 0.00 0.00 34.32 4.85
4090 7979 9.976776 TGGAAGGTAACATTGTTAAACCATATA 57.023 29.630 19.02 5.03 41.41 0.86
4091 7980 8.887264 TGGAAGGTAACATTGTTAAACCATAT 57.113 30.769 19.02 8.43 41.41 1.78
4092 7981 8.164733 TCTGGAAGGTAACATTGTTAAACCATA 58.835 33.333 19.02 12.10 41.41 2.74
4093 7982 7.007723 TCTGGAAGGTAACATTGTTAAACCAT 58.992 34.615 19.02 10.44 41.41 3.55
4094 7983 6.366340 TCTGGAAGGTAACATTGTTAAACCA 58.634 36.000 19.02 17.69 41.41 3.67
4095 7984 6.887626 TCTGGAAGGTAACATTGTTAAACC 57.112 37.500 10.73 11.37 41.41 3.27
4096 7985 9.758651 ATTTTCTGGAAGGTAACATTGTTAAAC 57.241 29.630 10.73 7.45 41.41 2.01
4097 7986 9.974980 GATTTTCTGGAAGGTAACATTGTTAAA 57.025 29.630 10.73 0.85 41.41 1.52
4098 7987 8.581578 GGATTTTCTGGAAGGTAACATTGTTAA 58.418 33.333 10.73 0.00 41.41 2.01
4099 7988 7.947890 AGGATTTTCTGGAAGGTAACATTGTTA 59.052 33.333 5.14 5.14 41.41 2.41
4100 7989 6.782494 AGGATTTTCTGGAAGGTAACATTGTT 59.218 34.615 7.30 7.30 41.41 2.83
4101 7990 6.314917 AGGATTTTCTGGAAGGTAACATTGT 58.685 36.000 0.00 0.00 41.41 2.71
4102 7991 6.403636 CGAGGATTTTCTGGAAGGTAACATTG 60.404 42.308 0.00 0.00 41.41 2.82
4158 8048 8.581057 AGTAATAATCTGCAATGAAGTAGACG 57.419 34.615 0.00 0.00 33.05 4.18
4182 8072 5.692204 CGTCCATAGATTTACAAGGCACTAG 59.308 44.000 0.00 0.00 38.49 2.57
4187 8077 4.694339 ACTCGTCCATAGATTTACAAGGC 58.306 43.478 0.00 0.00 0.00 4.35
4192 8082 5.238214 ACCTCGTACTCGTCCATAGATTTAC 59.762 44.000 0.00 0.00 38.33 2.01
4212 8102 1.142465 ACATGCCATCTGGATCACCTC 59.858 52.381 0.00 0.00 37.39 3.85
4254 8144 3.018479 GGCATCAGAAGAGCCCATC 57.982 57.895 0.00 0.00 42.58 3.51
4294 8228 7.624360 ATGAAGACCATCAAAGCGTTTAATA 57.376 32.000 0.00 0.00 32.06 0.98
4297 8231 5.957842 AATGAAGACCATCAAAGCGTTTA 57.042 34.783 0.00 0.00 33.53 2.01
4311 8245 5.870978 AGGCAACAAATATGCAAATGAAGAC 59.129 36.000 0.00 0.00 45.60 3.01
4329 8263 4.462483 TCATCATGGGAACTAAAAGGCAAC 59.538 41.667 0.00 0.00 0.00 4.17
4350 8284 4.340617 AGCCCGGAATAATGAAAAGTTCA 58.659 39.130 0.73 0.00 45.01 3.18
4351 8285 4.202020 GGAGCCCGGAATAATGAAAAGTTC 60.202 45.833 0.73 0.00 0.00 3.01
4352 8286 3.699538 GGAGCCCGGAATAATGAAAAGTT 59.300 43.478 0.73 0.00 0.00 2.66
4353 8287 3.288092 GGAGCCCGGAATAATGAAAAGT 58.712 45.455 0.73 0.00 0.00 2.66
4354 8288 2.290641 CGGAGCCCGGAATAATGAAAAG 59.709 50.000 0.73 0.00 44.15 2.27
4356 8290 1.961793 CGGAGCCCGGAATAATGAAA 58.038 50.000 0.73 0.00 44.15 2.69
4357 8291 3.698250 CGGAGCCCGGAATAATGAA 57.302 52.632 0.73 0.00 44.15 2.57
4385 8319 8.652290 ACAGAAGGAGAAATAAAGTGAAGTACT 58.348 33.333 0.00 0.00 42.89 2.73
4403 8340 1.668826 AGCCACCCAATACAGAAGGA 58.331 50.000 0.00 0.00 0.00 3.36
4416 8353 9.869757 AAATCATTACAAAGTTATTTAGCCACC 57.130 29.630 0.00 0.00 0.00 4.61
4429 8366 8.918658 CACCACATTCAAGAAATCATTACAAAG 58.081 33.333 0.00 0.00 0.00 2.77
4430 8367 7.384660 GCACCACATTCAAGAAATCATTACAAA 59.615 33.333 0.00 0.00 0.00 2.83
4431 8368 6.867816 GCACCACATTCAAGAAATCATTACAA 59.132 34.615 0.00 0.00 0.00 2.41
4432 8369 6.015603 TGCACCACATTCAAGAAATCATTACA 60.016 34.615 0.00 0.00 0.00 2.41
4433 8370 6.389091 TGCACCACATTCAAGAAATCATTAC 58.611 36.000 0.00 0.00 0.00 1.89
4434 8371 6.587206 TGCACCACATTCAAGAAATCATTA 57.413 33.333 0.00 0.00 0.00 1.90
4435 8372 5.471556 TGCACCACATTCAAGAAATCATT 57.528 34.783 0.00 0.00 0.00 2.57
4436 8373 5.421056 AGATGCACCACATTCAAGAAATCAT 59.579 36.000 0.00 0.00 39.84 2.45
4437 8374 4.768448 AGATGCACCACATTCAAGAAATCA 59.232 37.500 0.00 0.00 39.84 2.57
4438 8375 5.320549 AGATGCACCACATTCAAGAAATC 57.679 39.130 0.00 0.00 39.84 2.17
4439 8376 5.244402 TCAAGATGCACCACATTCAAGAAAT 59.756 36.000 0.00 0.00 39.84 2.17
4440 8377 4.583907 TCAAGATGCACCACATTCAAGAAA 59.416 37.500 0.00 0.00 39.84 2.52
4441 8378 4.143543 TCAAGATGCACCACATTCAAGAA 58.856 39.130 0.00 0.00 39.84 2.52
4442 8379 3.753815 TCAAGATGCACCACATTCAAGA 58.246 40.909 0.00 0.00 39.84 3.02
4443 8380 4.713824 ATCAAGATGCACCACATTCAAG 57.286 40.909 0.00 0.00 39.84 3.02
4444 8381 4.768448 AGAATCAAGATGCACCACATTCAA 59.232 37.500 0.00 0.00 39.84 2.69
4445 8382 4.338012 AGAATCAAGATGCACCACATTCA 58.662 39.130 0.00 0.00 39.84 2.57
4446 8383 4.978083 AGAATCAAGATGCACCACATTC 57.022 40.909 0.00 0.00 39.84 2.67
4447 8384 4.768448 TCAAGAATCAAGATGCACCACATT 59.232 37.500 0.00 0.00 39.84 2.71
4448 8385 4.338012 TCAAGAATCAAGATGCACCACAT 58.662 39.130 0.00 0.00 43.54 3.21
4449 8386 3.753815 TCAAGAATCAAGATGCACCACA 58.246 40.909 0.00 0.00 0.00 4.17
4450 8387 4.439700 CCATCAAGAATCAAGATGCACCAC 60.440 45.833 8.73 0.00 38.21 4.16
4451 8388 3.697542 CCATCAAGAATCAAGATGCACCA 59.302 43.478 8.73 0.00 38.21 4.17
4452 8389 3.698040 ACCATCAAGAATCAAGATGCACC 59.302 43.478 8.73 0.00 38.21 5.01
4453 8390 4.978083 ACCATCAAGAATCAAGATGCAC 57.022 40.909 8.73 0.00 38.21 4.57
4454 8391 5.011586 TCAACCATCAAGAATCAAGATGCA 58.988 37.500 8.73 0.00 38.21 3.96
4455 8392 5.571784 TCAACCATCAAGAATCAAGATGC 57.428 39.130 8.73 0.00 38.21 3.91
4456 8393 7.600065 AGTTTCAACCATCAAGAATCAAGATG 58.400 34.615 7.63 7.63 39.02 2.90
4457 8394 7.771927 AGTTTCAACCATCAAGAATCAAGAT 57.228 32.000 0.00 0.00 0.00 2.40
4458 8395 7.285172 TGAAGTTTCAACCATCAAGAATCAAGA 59.715 33.333 0.00 0.00 33.55 3.02
4459 8396 7.428020 TGAAGTTTCAACCATCAAGAATCAAG 58.572 34.615 0.00 0.00 33.55 3.02
4460 8397 7.345422 TGAAGTTTCAACCATCAAGAATCAA 57.655 32.000 0.00 0.00 33.55 2.57
4461 8398 6.957920 TGAAGTTTCAACCATCAAGAATCA 57.042 33.333 0.00 0.00 33.55 2.57
4462 8399 7.383300 CCTTTGAAGTTTCAACCATCAAGAATC 59.617 37.037 6.79 0.00 45.99 2.52
4463 8400 7.212274 CCTTTGAAGTTTCAACCATCAAGAAT 58.788 34.615 6.79 0.00 45.99 2.40
4464 8401 6.572519 CCTTTGAAGTTTCAACCATCAAGAA 58.427 36.000 6.79 0.00 45.99 2.52
4465 8402 5.451798 GCCTTTGAAGTTTCAACCATCAAGA 60.452 40.000 6.79 0.00 45.99 3.02
4466 8403 4.746611 GCCTTTGAAGTTTCAACCATCAAG 59.253 41.667 6.79 1.73 45.99 3.02
4467 8404 4.405358 AGCCTTTGAAGTTTCAACCATCAA 59.595 37.500 6.79 5.01 45.99 2.57
4468 8405 3.960102 AGCCTTTGAAGTTTCAACCATCA 59.040 39.130 6.79 0.00 45.99 3.07
4469 8406 4.037923 TGAGCCTTTGAAGTTTCAACCATC 59.962 41.667 6.79 4.68 45.99 3.51
4470 8407 3.960102 TGAGCCTTTGAAGTTTCAACCAT 59.040 39.130 6.79 0.00 45.99 3.55
4471 8408 3.360867 TGAGCCTTTGAAGTTTCAACCA 58.639 40.909 6.79 0.00 45.99 3.67
4472 8409 4.590850 ATGAGCCTTTGAAGTTTCAACC 57.409 40.909 6.79 0.26 45.99 3.77
4473 8410 7.370383 TCATTATGAGCCTTTGAAGTTTCAAC 58.630 34.615 6.79 0.00 45.99 3.18
4474 8411 7.523293 TCATTATGAGCCTTTGAAGTTTCAA 57.477 32.000 3.28 3.28 44.78 2.69
4475 8412 7.523293 TTCATTATGAGCCTTTGAAGTTTCA 57.477 32.000 0.00 0.00 34.92 2.69
4476 8413 8.299570 TCTTTCATTATGAGCCTTTGAAGTTTC 58.700 33.333 0.00 0.00 0.00 2.78
4477 8414 8.181904 TCTTTCATTATGAGCCTTTGAAGTTT 57.818 30.769 0.00 0.00 0.00 2.66
4478 8415 7.765695 TCTTTCATTATGAGCCTTTGAAGTT 57.234 32.000 0.00 0.00 0.00 2.66
4479 8416 7.765695 TTCTTTCATTATGAGCCTTTGAAGT 57.234 32.000 0.00 0.00 0.00 3.01
4480 8417 9.649167 AAATTCTTTCATTATGAGCCTTTGAAG 57.351 29.630 0.00 0.00 0.00 3.02
4482 8419 9.643693 GAAAATTCTTTCATTATGAGCCTTTGA 57.356 29.630 0.00 0.00 40.67 2.69
4483 8420 9.649167 AGAAAATTCTTTCATTATGAGCCTTTG 57.351 29.630 0.00 0.00 42.99 2.77
4504 8441 9.829507 TGGCAATTTTCTTTTCAGAATAGAAAA 57.170 25.926 28.89 28.89 46.12 2.29
4505 8442 9.260002 GTGGCAATTTTCTTTTCAGAATAGAAA 57.740 29.630 19.35 19.35 38.89 2.52
4506 8443 8.420222 TGTGGCAATTTTCTTTTCAGAATAGAA 58.580 29.630 10.97 10.97 38.89 2.10
4507 8444 7.950512 TGTGGCAATTTTCTTTTCAGAATAGA 58.049 30.769 0.00 0.00 38.89 1.98
4508 8445 8.767478 ATGTGGCAATTTTCTTTTCAGAATAG 57.233 30.769 0.00 0.00 38.89 1.73
4509 8446 9.859427 CTATGTGGCAATTTTCTTTTCAGAATA 57.141 29.630 0.00 0.00 38.89 1.75
4510 8447 8.370182 ACTATGTGGCAATTTTCTTTTCAGAAT 58.630 29.630 0.00 0.00 38.89 2.40
4511 8448 7.652909 CACTATGTGGCAATTTTCTTTTCAGAA 59.347 33.333 0.00 0.00 37.24 3.02
4512 8449 7.147312 CACTATGTGGCAATTTTCTTTTCAGA 58.853 34.615 0.00 0.00 0.00 3.27
4513 8450 7.342318 CACTATGTGGCAATTTTCTTTTCAG 57.658 36.000 0.00 0.00 0.00 3.02
4529 8466 7.807977 AAATTATCCTTAGCACCACTATGTG 57.192 36.000 0.00 0.00 39.29 3.21
4530 8467 8.714906 ACTAAATTATCCTTAGCACCACTATGT 58.285 33.333 0.00 0.00 30.79 2.29
4559 8496 8.135529 GCCTAAAATAACAACTGTGAAGTTCTT 58.864 33.333 4.17 0.00 0.00 2.52
4560 8497 7.502561 AGCCTAAAATAACAACTGTGAAGTTCT 59.497 33.333 4.17 0.00 0.00 3.01
4561 8498 7.649057 AGCCTAAAATAACAACTGTGAAGTTC 58.351 34.615 0.00 0.00 0.00 3.01
4562 8499 7.582667 AGCCTAAAATAACAACTGTGAAGTT 57.417 32.000 0.00 0.00 0.00 2.66
4563 8500 7.425606 CAAGCCTAAAATAACAACTGTGAAGT 58.574 34.615 0.00 0.00 0.00 3.01
4564 8501 6.363357 GCAAGCCTAAAATAACAACTGTGAAG 59.637 38.462 0.00 0.00 0.00 3.02
4565 8502 6.183360 TGCAAGCCTAAAATAACAACTGTGAA 60.183 34.615 0.00 0.00 0.00 3.18
4566 8503 5.300539 TGCAAGCCTAAAATAACAACTGTGA 59.699 36.000 0.00 0.00 0.00 3.58
4567 8504 5.527951 TGCAAGCCTAAAATAACAACTGTG 58.472 37.500 0.00 0.00 0.00 3.66
4568 8505 5.782893 TGCAAGCCTAAAATAACAACTGT 57.217 34.783 0.00 0.00 0.00 3.55
4569 8506 5.405269 GGTTGCAAGCCTAAAATAACAACTG 59.595 40.000 17.84 0.00 37.06 3.16
4570 8507 5.304357 AGGTTGCAAGCCTAAAATAACAACT 59.696 36.000 24.26 0.00 37.06 3.16
4571 8508 5.538118 AGGTTGCAAGCCTAAAATAACAAC 58.462 37.500 24.26 0.00 36.34 3.32
4572 8509 5.799827 AGGTTGCAAGCCTAAAATAACAA 57.200 34.783 24.26 0.00 33.97 2.83
4573 8510 6.902771 TTAGGTTGCAAGCCTAAAATAACA 57.097 33.333 25.46 11.13 43.34 2.41
4581 8518 6.661377 TGAATGTTTATTAGGTTGCAAGCCTA 59.339 34.615 24.26 20.76 37.54 3.93
4582 8519 5.480073 TGAATGTTTATTAGGTTGCAAGCCT 59.520 36.000 24.26 21.70 40.00 4.58
4583 8520 5.576774 GTGAATGTTTATTAGGTTGCAAGCC 59.423 40.000 24.26 16.14 0.00 4.35
4584 8521 5.286082 CGTGAATGTTTATTAGGTTGCAAGC 59.714 40.000 20.81 20.81 0.00 4.01
4585 8522 5.799936 CCGTGAATGTTTATTAGGTTGCAAG 59.200 40.000 0.00 0.00 0.00 4.01
4586 8523 5.241949 ACCGTGAATGTTTATTAGGTTGCAA 59.758 36.000 0.00 0.00 29.75 4.08
4587 8524 4.762765 ACCGTGAATGTTTATTAGGTTGCA 59.237 37.500 0.00 0.00 29.75 4.08
4588 8525 5.123344 AGACCGTGAATGTTTATTAGGTTGC 59.877 40.000 0.00 0.00 32.39 4.17
4589 8526 6.594159 AGAGACCGTGAATGTTTATTAGGTTG 59.406 38.462 0.00 0.00 32.39 3.77
4590 8527 6.708285 AGAGACCGTGAATGTTTATTAGGTT 58.292 36.000 0.00 0.00 32.39 3.50
4591 8528 6.295719 AGAGACCGTGAATGTTTATTAGGT 57.704 37.500 0.00 0.00 33.87 3.08
4592 8529 7.262772 TGTAGAGACCGTGAATGTTTATTAGG 58.737 38.462 0.00 0.00 0.00 2.69
4593 8530 7.974501 ACTGTAGAGACCGTGAATGTTTATTAG 59.025 37.037 0.00 0.00 0.00 1.73
4594 8531 7.833786 ACTGTAGAGACCGTGAATGTTTATTA 58.166 34.615 0.00 0.00 0.00 0.98
4595 8532 6.698380 ACTGTAGAGACCGTGAATGTTTATT 58.302 36.000 0.00 0.00 0.00 1.40
4596 8533 6.282199 ACTGTAGAGACCGTGAATGTTTAT 57.718 37.500 0.00 0.00 0.00 1.40
4597 8534 5.717078 ACTGTAGAGACCGTGAATGTTTA 57.283 39.130 0.00 0.00 0.00 2.01
4598 8535 4.602340 ACTGTAGAGACCGTGAATGTTT 57.398 40.909 0.00 0.00 0.00 2.83
4599 8536 4.602340 AACTGTAGAGACCGTGAATGTT 57.398 40.909 0.00 0.00 0.00 2.71
4600 8537 4.602340 AAACTGTAGAGACCGTGAATGT 57.398 40.909 0.00 0.00 0.00 2.71
4601 8538 5.950883 TCTAAACTGTAGAGACCGTGAATG 58.049 41.667 0.00 0.00 0.00 2.67
4602 8539 5.393243 GCTCTAAACTGTAGAGACCGTGAAT 60.393 44.000 13.34 0.00 42.68 2.57
4603 8540 4.082895 GCTCTAAACTGTAGAGACCGTGAA 60.083 45.833 13.34 0.00 42.68 3.18
4604 8541 3.439476 GCTCTAAACTGTAGAGACCGTGA 59.561 47.826 13.34 0.00 42.68 4.35
4605 8542 3.440872 AGCTCTAAACTGTAGAGACCGTG 59.559 47.826 13.34 0.00 42.68 4.94
4606 8543 3.688235 AGCTCTAAACTGTAGAGACCGT 58.312 45.455 13.34 0.00 42.68 4.83
4607 8544 5.006941 GTCTAGCTCTAAACTGTAGAGACCG 59.993 48.000 13.34 2.12 42.68 4.79
4608 8545 5.881443 TGTCTAGCTCTAAACTGTAGAGACC 59.119 44.000 13.34 0.00 42.68 3.85
4609 8546 6.988622 TGTCTAGCTCTAAACTGTAGAGAC 57.011 41.667 13.34 0.00 42.68 3.36
4610 8547 7.829706 TGATTGTCTAGCTCTAAACTGTAGAGA 59.170 37.037 13.34 2.29 42.68 3.10
4611 8548 7.990917 TGATTGTCTAGCTCTAAACTGTAGAG 58.009 38.462 6.10 6.10 42.87 2.43
4612 8549 7.939784 TGATTGTCTAGCTCTAAACTGTAGA 57.060 36.000 0.00 0.00 0.00 2.59
4613 8550 8.462811 TCTTGATTGTCTAGCTCTAAACTGTAG 58.537 37.037 0.00 0.00 0.00 2.74
4614 8551 8.349568 TCTTGATTGTCTAGCTCTAAACTGTA 57.650 34.615 0.00 0.00 0.00 2.74
4615 8552 7.233389 TCTTGATTGTCTAGCTCTAAACTGT 57.767 36.000 0.00 0.00 0.00 3.55
4616 8553 6.756074 CCTCTTGATTGTCTAGCTCTAAACTG 59.244 42.308 0.00 0.00 0.00 3.16
4617 8554 6.439058 ACCTCTTGATTGTCTAGCTCTAAACT 59.561 38.462 0.00 0.00 0.00 2.66
4618 8555 6.635755 ACCTCTTGATTGTCTAGCTCTAAAC 58.364 40.000 0.00 0.00 0.00 2.01
4619 8556 6.859112 ACCTCTTGATTGTCTAGCTCTAAA 57.141 37.500 0.00 0.00 0.00 1.85
4620 8557 7.147880 GGTTACCTCTTGATTGTCTAGCTCTAA 60.148 40.741 0.00 0.00 0.00 2.10
4621 8558 6.321690 GGTTACCTCTTGATTGTCTAGCTCTA 59.678 42.308 0.00 0.00 0.00 2.43
4622 8559 5.128008 GGTTACCTCTTGATTGTCTAGCTCT 59.872 44.000 0.00 0.00 0.00 4.09
4623 8560 5.105310 TGGTTACCTCTTGATTGTCTAGCTC 60.105 44.000 2.07 0.00 0.00 4.09
4624 8561 4.777896 TGGTTACCTCTTGATTGTCTAGCT 59.222 41.667 2.07 0.00 0.00 3.32
4625 8562 4.870991 GTGGTTACCTCTTGATTGTCTAGC 59.129 45.833 2.07 0.00 0.00 3.42
4626 8563 5.103000 CGTGGTTACCTCTTGATTGTCTAG 58.897 45.833 2.07 0.00 0.00 2.43
4627 8564 4.768448 TCGTGGTTACCTCTTGATTGTCTA 59.232 41.667 2.07 0.00 0.00 2.59
4628 8565 3.576982 TCGTGGTTACCTCTTGATTGTCT 59.423 43.478 2.07 0.00 0.00 3.41
4629 8566 3.921677 TCGTGGTTACCTCTTGATTGTC 58.078 45.455 2.07 0.00 0.00 3.18
4630 8567 3.323979 ACTCGTGGTTACCTCTTGATTGT 59.676 43.478 2.07 0.00 0.00 2.71
4631 8568 3.926616 ACTCGTGGTTACCTCTTGATTG 58.073 45.455 2.07 0.00 0.00 2.67
4632 8569 3.056035 GGACTCGTGGTTACCTCTTGATT 60.056 47.826 2.07 0.00 0.00 2.57
4633 8570 2.496470 GGACTCGTGGTTACCTCTTGAT 59.504 50.000 2.07 0.00 0.00 2.57
4634 8571 1.891150 GGACTCGTGGTTACCTCTTGA 59.109 52.381 2.07 0.00 0.00 3.02
4635 8572 1.616865 TGGACTCGTGGTTACCTCTTG 59.383 52.381 2.07 0.00 0.00 3.02
4636 8573 2.005370 TGGACTCGTGGTTACCTCTT 57.995 50.000 2.07 0.00 0.00 2.85
4637 8574 2.005370 TTGGACTCGTGGTTACCTCT 57.995 50.000 2.07 0.00 0.00 3.69
4638 8575 2.298163 TCTTTGGACTCGTGGTTACCTC 59.702 50.000 2.07 0.00 0.00 3.85
4639 8576 2.036862 GTCTTTGGACTCGTGGTTACCT 59.963 50.000 2.07 0.00 39.24 3.08
4640 8577 2.410939 GTCTTTGGACTCGTGGTTACC 58.589 52.381 0.00 0.00 39.24 2.85
4657 8594 8.621278 GTTTGCACAAAATTGATGACGAAGTCT 61.621 37.037 0.00 0.00 44.62 3.24
4658 8595 6.560251 GTTTGCACAAAATTGATGACGAAGTC 60.560 38.462 0.00 0.00 44.60 3.01
4659 8596 5.231991 GTTTGCACAAAATTGATGACGAAGT 59.768 36.000 0.00 0.00 35.91 3.01
4660 8597 5.459762 AGTTTGCACAAAATTGATGACGAAG 59.540 36.000 0.00 0.00 31.33 3.79
4661 8598 5.231779 CAGTTTGCACAAAATTGATGACGAA 59.768 36.000 0.00 0.00 37.61 3.85
4662 8599 4.739228 CAGTTTGCACAAAATTGATGACGA 59.261 37.500 0.00 0.00 37.61 4.20
4663 8600 4.503734 ACAGTTTGCACAAAATTGATGACG 59.496 37.500 12.95 0.00 37.61 4.35
4664 8601 5.971895 ACAGTTTGCACAAAATTGATGAC 57.028 34.783 12.95 0.00 37.61 3.06
4665 8602 6.981762 AAACAGTTTGCACAAAATTGATGA 57.018 29.167 12.95 0.00 37.61 2.92
4666 8603 7.908230 ACTAAACAGTTTGCACAAAATTGATG 58.092 30.769 8.93 4.78 37.61 3.07
4667 8604 9.762933 ATACTAAACAGTTTGCACAAAATTGAT 57.237 25.926 8.93 2.44 37.61 2.57
4673 8610 9.724839 GACTTTATACTAAACAGTTTGCACAAA 57.275 29.630 8.93 0.00 0.00 2.83
4674 8611 8.347035 GGACTTTATACTAAACAGTTTGCACAA 58.653 33.333 8.93 0.00 0.00 3.33
4675 8612 7.307514 CGGACTTTATACTAAACAGTTTGCACA 60.308 37.037 8.93 0.00 0.00 4.57
4676 8613 7.013529 CGGACTTTATACTAAACAGTTTGCAC 58.986 38.462 8.93 0.00 0.00 4.57
4677 8614 6.148150 CCGGACTTTATACTAAACAGTTTGCA 59.852 38.462 8.93 0.00 0.00 4.08
4678 8615 6.540205 CCGGACTTTATACTAAACAGTTTGC 58.460 40.000 8.93 0.00 0.00 3.68
4679 8616 6.402875 GGCCGGACTTTATACTAAACAGTTTG 60.403 42.308 5.05 1.82 0.00 2.93
4680 8617 5.645067 GGCCGGACTTTATACTAAACAGTTT 59.355 40.000 5.05 3.49 0.00 2.66
4681 8618 5.181009 GGCCGGACTTTATACTAAACAGTT 58.819 41.667 5.05 0.00 0.00 3.16
4682 8619 4.678840 CGGCCGGACTTTATACTAAACAGT 60.679 45.833 20.10 0.00 0.00 3.55
4683 8620 3.800506 CGGCCGGACTTTATACTAAACAG 59.199 47.826 20.10 0.00 0.00 3.16
4684 8621 3.784338 CGGCCGGACTTTATACTAAACA 58.216 45.455 20.10 0.00 0.00 2.83
4685 8622 2.541346 GCGGCCGGACTTTATACTAAAC 59.459 50.000 29.38 0.00 0.00 2.01
4686 8623 2.483538 GGCGGCCGGACTTTATACTAAA 60.484 50.000 29.38 0.00 0.00 1.85
4687 8624 1.069049 GGCGGCCGGACTTTATACTAA 59.931 52.381 29.38 0.00 0.00 2.24
4688 8625 0.675633 GGCGGCCGGACTTTATACTA 59.324 55.000 29.38 0.00 0.00 1.82
4689 8626 1.047034 AGGCGGCCGGACTTTATACT 61.047 55.000 29.38 0.00 0.00 2.12
4690 8627 0.599466 GAGGCGGCCGGACTTTATAC 60.599 60.000 29.38 6.13 29.96 1.47
4691 8628 0.757935 AGAGGCGGCCGGACTTTATA 60.758 55.000 29.38 0.00 29.96 0.98
4692 8629 2.029307 GAGAGGCGGCCGGACTTTAT 62.029 60.000 29.38 5.43 29.96 1.40
4693 8630 2.682494 AGAGGCGGCCGGACTTTA 60.682 61.111 29.38 0.00 29.96 1.85
4694 8631 4.083862 GAGAGGCGGCCGGACTTT 62.084 66.667 29.38 10.47 29.96 2.66
4696 8633 3.733507 TATGAGAGGCGGCCGGACT 62.734 63.158 29.38 15.71 35.84 3.85
4697 8634 3.214250 CTATGAGAGGCGGCCGGAC 62.214 68.421 29.38 11.26 0.00 4.79
4698 8635 2.912542 CTATGAGAGGCGGCCGGA 60.913 66.667 29.38 0.00 0.00 5.14
4699 8636 2.701163 GAACTATGAGAGGCGGCCGG 62.701 65.000 29.38 9.17 0.00 6.13
4700 8637 1.300233 GAACTATGAGAGGCGGCCG 60.300 63.158 24.05 24.05 0.00 6.13
4701 8638 1.300233 CGAACTATGAGAGGCGGCC 60.300 63.158 12.11 12.11 0.00 6.13
4702 8639 1.300233 CCGAACTATGAGAGGCGGC 60.300 63.158 0.00 0.00 39.40 6.53
4703 8640 0.030908 GTCCGAACTATGAGAGGCGG 59.969 60.000 4.61 4.61 44.26 6.13
4704 8641 1.025812 AGTCCGAACTATGAGAGGCG 58.974 55.000 0.00 0.00 32.59 5.52
4705 8642 3.528597 AAAGTCCGAACTATGAGAGGC 57.471 47.619 0.00 0.00 33.48 4.70
4706 8643 4.184629 CCAAAAGTCCGAACTATGAGAGG 58.815 47.826 0.00 0.00 33.48 3.69
4707 8644 4.822026 ACCAAAAGTCCGAACTATGAGAG 58.178 43.478 0.00 0.00 33.48 3.20
4708 8645 4.884668 ACCAAAAGTCCGAACTATGAGA 57.115 40.909 0.00 0.00 33.48 3.27
4709 8646 4.755123 ACAACCAAAAGTCCGAACTATGAG 59.245 41.667 0.00 0.00 33.48 2.90
4710 8647 4.513692 CACAACCAAAAGTCCGAACTATGA 59.486 41.667 0.00 0.00 33.48 2.15
4711 8648 4.274950 ACACAACCAAAAGTCCGAACTATG 59.725 41.667 0.00 0.00 33.48 2.23
4712 8649 4.457466 ACACAACCAAAAGTCCGAACTAT 58.543 39.130 0.00 0.00 33.48 2.12
4713 8650 3.876341 ACACAACCAAAAGTCCGAACTA 58.124 40.909 0.00 0.00 33.48 2.24
4714 8651 2.718563 ACACAACCAAAAGTCCGAACT 58.281 42.857 0.00 0.00 37.32 3.01
4715 8652 3.175929 CAACACAACCAAAAGTCCGAAC 58.824 45.455 0.00 0.00 0.00 3.95
4716 8653 2.416162 GCAACACAACCAAAAGTCCGAA 60.416 45.455 0.00 0.00 0.00 4.30
4717 8654 1.133407 GCAACACAACCAAAAGTCCGA 59.867 47.619 0.00 0.00 0.00 4.55
4718 8655 1.555477 GCAACACAACCAAAAGTCCG 58.445 50.000 0.00 0.00 0.00 4.79
4719 8656 1.480545 AGGCAACACAACCAAAAGTCC 59.519 47.619 0.00 0.00 41.41 3.85
4720 8657 2.959507 AGGCAACACAACCAAAAGTC 57.040 45.000 0.00 0.00 41.41 3.01
4721 8658 3.130340 CACTAGGCAACACAACCAAAAGT 59.870 43.478 0.00 0.00 41.41 2.66
4722 8659 3.705604 CACTAGGCAACACAACCAAAAG 58.294 45.455 0.00 0.00 41.41 2.27
4723 8660 2.159170 GCACTAGGCAACACAACCAAAA 60.159 45.455 0.00 0.00 43.97 2.44
4724 8661 1.407258 GCACTAGGCAACACAACCAAA 59.593 47.619 0.00 0.00 43.97 3.28
4725 8662 1.028905 GCACTAGGCAACACAACCAA 58.971 50.000 0.00 0.00 43.97 3.67
4726 8663 2.714259 GCACTAGGCAACACAACCA 58.286 52.632 0.00 0.00 43.97 3.67
4736 8673 3.009723 TGTTAAGCTTCATGCACTAGGC 58.990 45.455 0.00 0.00 45.94 3.93
4737 8674 4.002982 TGTGTTAAGCTTCATGCACTAGG 58.997 43.478 0.00 0.00 45.94 3.02
4738 8675 5.611796 TTGTGTTAAGCTTCATGCACTAG 57.388 39.130 0.00 0.00 45.94 2.57
4739 8676 5.278266 GGTTTGTGTTAAGCTTCATGCACTA 60.278 40.000 0.00 2.69 45.94 2.74
4740 8677 4.499696 GGTTTGTGTTAAGCTTCATGCACT 60.500 41.667 0.00 0.00 45.94 4.40
4741 8678 3.735746 GGTTTGTGTTAAGCTTCATGCAC 59.264 43.478 0.00 8.79 45.94 4.57
4742 8679 3.549827 CGGTTTGTGTTAAGCTTCATGCA 60.550 43.478 0.00 0.00 45.94 3.96
4743 8680 2.979813 CGGTTTGTGTTAAGCTTCATGC 59.020 45.455 0.00 0.00 43.29 4.06
4744 8681 2.979813 GCGGTTTGTGTTAAGCTTCATG 59.020 45.455 0.00 0.00 0.00 3.07
4745 8682 2.884639 AGCGGTTTGTGTTAAGCTTCAT 59.115 40.909 0.00 0.00 0.00 2.57
4746 8683 2.289547 GAGCGGTTTGTGTTAAGCTTCA 59.710 45.455 0.00 0.00 34.85 3.02
4747 8684 2.289547 TGAGCGGTTTGTGTTAAGCTTC 59.710 45.455 0.00 0.00 34.85 3.86
4748 8685 2.032924 GTGAGCGGTTTGTGTTAAGCTT 59.967 45.455 3.48 3.48 34.85 3.74
4749 8686 1.602377 GTGAGCGGTTTGTGTTAAGCT 59.398 47.619 0.00 0.00 37.69 3.74
4750 8687 1.334689 GGTGAGCGGTTTGTGTTAAGC 60.335 52.381 0.00 0.00 0.00 3.09
4751 8688 2.032030 CAGGTGAGCGGTTTGTGTTAAG 60.032 50.000 0.00 0.00 0.00 1.85
4752 8689 1.944024 CAGGTGAGCGGTTTGTGTTAA 59.056 47.619 0.00 0.00 0.00 2.01
4753 8690 1.588674 CAGGTGAGCGGTTTGTGTTA 58.411 50.000 0.00 0.00 0.00 2.41
4754 8691 1.724582 GCAGGTGAGCGGTTTGTGTT 61.725 55.000 0.00 0.00 0.00 3.32
4755 8692 2.186826 GCAGGTGAGCGGTTTGTGT 61.187 57.895 0.00 0.00 0.00 3.72
4756 8693 1.723608 TTGCAGGTGAGCGGTTTGTG 61.724 55.000 0.00 0.00 37.31 3.33
4757 8694 0.823356 ATTGCAGGTGAGCGGTTTGT 60.823 50.000 0.00 0.00 37.31 2.83
4758 8695 0.109597 GATTGCAGGTGAGCGGTTTG 60.110 55.000 0.00 0.00 37.31 2.93
4759 8696 1.577328 CGATTGCAGGTGAGCGGTTT 61.577 55.000 0.00 0.00 37.31 3.27
4760 8697 2.034879 CGATTGCAGGTGAGCGGTT 61.035 57.895 0.00 0.00 37.31 4.44
4761 8698 2.434884 CGATTGCAGGTGAGCGGT 60.435 61.111 0.00 0.00 37.31 5.68
4762 8699 2.434884 ACGATTGCAGGTGAGCGG 60.435 61.111 0.00 0.00 37.31 5.52
4763 8700 2.456119 GGACGATTGCAGGTGAGCG 61.456 63.158 0.00 0.00 37.31 5.03
4764 8701 0.674895 AAGGACGATTGCAGGTGAGC 60.675 55.000 0.00 0.00 0.00 4.26
4765 8702 1.081892 CAAGGACGATTGCAGGTGAG 58.918 55.000 0.00 0.00 0.00 3.51
4766 8703 3.231734 CAAGGACGATTGCAGGTGA 57.768 52.632 0.00 0.00 0.00 4.02
4773 8710 2.670414 GAGACTTGAGCAAGGACGATTG 59.330 50.000 14.14 0.00 42.53 2.67
4774 8711 2.564947 AGAGACTTGAGCAAGGACGATT 59.435 45.455 14.14 0.00 42.53 3.34
4775 8712 2.175202 AGAGACTTGAGCAAGGACGAT 58.825 47.619 14.14 0.00 42.53 3.73
4776 8713 1.621992 AGAGACTTGAGCAAGGACGA 58.378 50.000 14.14 0.00 42.53 4.20
4777 8714 2.416162 GGTAGAGACTTGAGCAAGGACG 60.416 54.545 14.14 0.00 42.53 4.79
4778 8715 2.563179 TGGTAGAGACTTGAGCAAGGAC 59.437 50.000 14.14 8.02 42.53 3.85
4779 8716 2.828520 CTGGTAGAGACTTGAGCAAGGA 59.171 50.000 14.14 0.00 42.53 3.36
4780 8717 2.676463 GCTGGTAGAGACTTGAGCAAGG 60.676 54.545 14.14 0.00 42.53 3.61
4781 8718 2.615869 GCTGGTAGAGACTTGAGCAAG 58.384 52.381 8.60 8.60 43.79 4.01
4782 8719 1.276421 GGCTGGTAGAGACTTGAGCAA 59.724 52.381 0.00 0.00 0.00 3.91
4783 8720 0.898320 GGCTGGTAGAGACTTGAGCA 59.102 55.000 0.00 0.00 0.00 4.26
4784 8721 0.898320 TGGCTGGTAGAGACTTGAGC 59.102 55.000 0.00 0.00 0.00 4.26
4785 8722 3.685139 TTTGGCTGGTAGAGACTTGAG 57.315 47.619 0.00 0.00 0.00 3.02
4786 8723 3.646162 TCTTTTGGCTGGTAGAGACTTGA 59.354 43.478 0.00 0.00 0.00 3.02
4787 8724 4.008074 TCTTTTGGCTGGTAGAGACTTG 57.992 45.455 0.00 0.00 0.00 3.16
4788 8725 4.706842 TTCTTTTGGCTGGTAGAGACTT 57.293 40.909 0.00 0.00 0.00 3.01
4789 8726 4.287067 TCATTCTTTTGGCTGGTAGAGACT 59.713 41.667 0.00 0.00 0.00 3.24
4790 8727 4.393371 GTCATTCTTTTGGCTGGTAGAGAC 59.607 45.833 0.00 0.00 0.00 3.36
4791 8728 4.041567 TGTCATTCTTTTGGCTGGTAGAGA 59.958 41.667 0.00 0.00 0.00 3.10
4792 8729 4.154918 GTGTCATTCTTTTGGCTGGTAGAG 59.845 45.833 0.00 0.00 0.00 2.43
4793 8730 4.072131 GTGTCATTCTTTTGGCTGGTAGA 58.928 43.478 0.00 0.00 0.00 2.59
4794 8731 3.820467 TGTGTCATTCTTTTGGCTGGTAG 59.180 43.478 0.00 0.00 0.00 3.18
4795 8732 3.820467 CTGTGTCATTCTTTTGGCTGGTA 59.180 43.478 0.00 0.00 0.00 3.25
4796 8733 2.624838 CTGTGTCATTCTTTTGGCTGGT 59.375 45.455 0.00 0.00 0.00 4.00
4797 8734 2.624838 ACTGTGTCATTCTTTTGGCTGG 59.375 45.455 0.00 0.00 0.00 4.85
4798 8735 3.316029 TGACTGTGTCATTCTTTTGGCTG 59.684 43.478 0.00 0.00 37.67 4.85
4799 8736 3.316308 GTGACTGTGTCATTCTTTTGGCT 59.684 43.478 3.65 0.00 44.63 4.75
4800 8737 3.066621 TGTGACTGTGTCATTCTTTTGGC 59.933 43.478 3.65 0.00 44.63 4.52
4801 8738 4.601019 GTGTGACTGTGTCATTCTTTTGG 58.399 43.478 3.65 0.00 44.63 3.28
4802 8739 4.274069 CGTGTGACTGTGTCATTCTTTTG 58.726 43.478 3.65 0.00 44.63 2.44
4803 8740 3.312421 CCGTGTGACTGTGTCATTCTTTT 59.688 43.478 3.65 0.00 44.63 2.27
4804 8741 2.872245 CCGTGTGACTGTGTCATTCTTT 59.128 45.455 3.65 0.00 44.63 2.52
4805 8742 2.483876 CCGTGTGACTGTGTCATTCTT 58.516 47.619 3.65 0.00 44.63 2.52
4806 8743 1.270305 CCCGTGTGACTGTGTCATTCT 60.270 52.381 3.65 0.00 44.63 2.40
4807 8744 1.148310 CCCGTGTGACTGTGTCATTC 58.852 55.000 3.65 0.62 44.63 2.67
4808 8745 0.468226 ACCCGTGTGACTGTGTCATT 59.532 50.000 3.65 0.00 44.63 2.57
4809 8746 1.334160 TACCCGTGTGACTGTGTCAT 58.666 50.000 3.65 0.00 44.63 3.06
4810 8747 1.334160 ATACCCGTGTGACTGTGTCA 58.666 50.000 0.00 0.00 40.50 3.58
4811 8748 2.490903 AGTATACCCGTGTGACTGTGTC 59.509 50.000 0.00 0.00 0.00 3.67
4812 8749 2.522185 AGTATACCCGTGTGACTGTGT 58.478 47.619 0.00 0.00 0.00 3.72
4813 8750 3.250744 CAAGTATACCCGTGTGACTGTG 58.749 50.000 0.00 0.00 0.00 3.66
4814 8751 2.353406 GCAAGTATACCCGTGTGACTGT 60.353 50.000 0.00 0.00 0.00 3.55
4815 8752 2.268298 GCAAGTATACCCGTGTGACTG 58.732 52.381 0.00 0.00 0.00 3.51
4816 8753 1.897133 TGCAAGTATACCCGTGTGACT 59.103 47.619 0.00 0.00 0.00 3.41
4817 8754 2.373540 TGCAAGTATACCCGTGTGAC 57.626 50.000 0.00 0.00 0.00 3.67
4818 8755 3.527533 GAATGCAAGTATACCCGTGTGA 58.472 45.455 0.00 0.00 0.00 3.58
4836 8773 2.083774 CAGCCATACACACAACGGAAT 58.916 47.619 0.00 0.00 0.00 3.01
4837 8774 1.518325 CAGCCATACACACAACGGAA 58.482 50.000 0.00 0.00 0.00 4.30
4839 8776 0.605319 ACCAGCCATACACACAACGG 60.605 55.000 0.00 0.00 0.00 4.44
4856 8793 6.072008 ACCGGTAATGTGTTTTTGGTAATACC 60.072 38.462 4.49 1.71 39.22 2.73
4858 8795 7.663081 TGTACCGGTAATGTGTTTTTGGTAATA 59.337 33.333 17.78 0.00 32.94 0.98
4860 8797 5.824624 TGTACCGGTAATGTGTTTTTGGTAA 59.175 36.000 17.78 0.00 32.94 2.85
4872 8809 3.123804 GAGTCTGCATGTACCGGTAATG 58.876 50.000 17.78 20.76 0.00 1.90
4875 8812 0.736636 CGAGTCTGCATGTACCGGTA 59.263 55.000 11.16 11.16 0.00 4.02
4888 8825 2.688446 TCACTCATAAATCGCCGAGTCT 59.312 45.455 0.00 0.00 36.60 3.24
4926 8867 6.262323 GTAGAATACTGTAAGCTTCAAGCG 57.738 41.667 0.00 0.00 41.99 4.68
4954 8895 3.317150 CAGTGTCAATGTGCTCGAAGTA 58.683 45.455 0.00 0.00 0.00 2.24
4955 8896 2.138320 CAGTGTCAATGTGCTCGAAGT 58.862 47.619 0.00 0.00 0.00 3.01
4956 8897 1.462283 CCAGTGTCAATGTGCTCGAAG 59.538 52.381 0.00 0.00 0.00 3.79
4957 8898 1.202639 ACCAGTGTCAATGTGCTCGAA 60.203 47.619 0.00 0.00 0.00 3.71
4958 8899 0.392706 ACCAGTGTCAATGTGCTCGA 59.607 50.000 0.00 0.00 0.00 4.04
4959 8900 0.792640 GACCAGTGTCAATGTGCTCG 59.207 55.000 0.00 0.00 41.37 5.03
5012 8983 4.690748 CGTGCTCATCTTTTAAGACCAGAA 59.309 41.667 0.00 0.00 37.98 3.02
5142 9113 9.674824 CTAATATACTCACTTAAACGTACCAGG 57.325 37.037 0.00 0.00 0.00 4.45
5162 9133 8.088981 GGAATCGATACCACACTGAACTAATAT 58.911 37.037 0.00 0.00 0.00 1.28
5173 9144 1.067212 AGCGAGGAATCGATACCACAC 59.933 52.381 0.00 0.00 34.64 3.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.