Multiple sequence alignment - TraesCS5D01G498300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G498300 chr5D 100.000 2549 0 0 1 2549 528216513 528213965 0.000000e+00 4708.0
1 TraesCS5D01G498300 chr5D 85.593 118 17 0 230 347 460171684 460171801 9.580000e-25 124.0
2 TraesCS5D01G498300 chr5A 89.375 1760 134 27 7 1752 656046198 656044478 0.000000e+00 2165.0
3 TraesCS5D01G498300 chr5A 92.714 398 15 9 1714 2105 656044482 656044093 1.710000e-156 562.0
4 TraesCS5D01G498300 chr5A 91.304 115 7 2 2432 2543 656012248 656012134 1.220000e-33 154.0
5 TraesCS5D01G498300 chr5A 84.810 79 12 0 230 308 637089370 637089448 2.100000e-11 80.5
6 TraesCS5D01G498300 chr5A 91.837 49 4 0 2105 2153 656044073 656044025 4.550000e-08 69.4
7 TraesCS5D01G498300 chr5B 88.633 1522 97 38 547 2045 664980969 664979501 0.000000e+00 1783.0
8 TraesCS5D01G498300 chr5B 87.892 446 38 4 6 451 664981481 664981052 6.290000e-141 510.0
9 TraesCS5D01G498300 chr5B 81.818 121 22 0 230 350 281173829 281173949 4.490000e-18 102.0
10 TraesCS5D01G498300 chr4D 90.517 116 10 1 2432 2547 314713845 314713731 4.390000e-33 152.0
11 TraesCS5D01G498300 chr4D 87.931 116 12 2 2432 2547 428014610 428014497 4.420000e-28 135.0
12 TraesCS5D01G498300 chr4A 87.931 116 12 2 2432 2547 161175908 161176021 4.420000e-28 135.0
13 TraesCS5D01G498300 chr4A 85.000 120 18 0 230 349 7145406 7145287 3.440000e-24 122.0
14 TraesCS5D01G498300 chr4A 76.961 204 41 4 2231 2428 160914166 160914369 7.450000e-21 111.0
15 TraesCS5D01G498300 chr4A 84.615 78 12 0 269 346 660918091 660918014 7.560000e-11 78.7
16 TraesCS5D01G498300 chr2D 89.583 96 6 3 2432 2525 199100110 199100017 4.450000e-23 119.0
17 TraesCS5D01G498300 chr2D 95.652 46 2 0 2150 2195 534729914 534729959 9.780000e-10 75.0
18 TraesCS5D01G498300 chr2D 85.507 69 8 2 2334 2401 450234010 450233943 1.270000e-08 71.3
19 TraesCS5D01G498300 chr2B 88.000 100 8 3 2432 2529 375126465 375126562 5.760000e-22 115.0
20 TraesCS5D01G498300 chr2B 84.211 76 12 0 230 305 212934784 212934709 9.780000e-10 75.0
21 TraesCS5D01G498300 chr3B 87.179 78 10 0 2334 2411 144786904 144786827 3.490000e-14 89.8
22 TraesCS5D01G498300 chr3B 88.525 61 7 0 2435 2495 75070956 75071016 9.780000e-10 75.0
23 TraesCS5D01G498300 chr7D 80.508 118 20 3 230 346 68412250 68412135 1.260000e-13 87.9
24 TraesCS5D01G498300 chr7D 100.000 42 0 0 2154 2195 462673295 462673254 7.560000e-11 78.7
25 TraesCS5D01G498300 chr1A 87.013 77 8 2 230 305 402946375 402946300 4.520000e-13 86.1
26 TraesCS5D01G498300 chr6A 97.872 47 1 0 2150 2196 498950128 498950174 5.840000e-12 82.4
27 TraesCS5D01G498300 chr7B 84.146 82 12 1 269 349 113920386 113920467 7.560000e-11 78.7
28 TraesCS5D01G498300 chr7B 100.000 42 0 0 2154 2195 485833154 485833113 7.560000e-11 78.7
29 TraesCS5D01G498300 chr6D 100.000 42 0 0 2154 2195 10765740 10765781 7.560000e-11 78.7
30 TraesCS5D01G498300 chr6D 97.778 45 1 0 2151 2195 313503399 313503443 7.560000e-11 78.7
31 TraesCS5D01G498300 chr6B 100.000 42 0 0 2154 2195 20360129 20360170 7.560000e-11 78.7
32 TraesCS5D01G498300 chr1D 100.000 42 0 0 2154 2195 142656885 142656844 7.560000e-11 78.7
33 TraesCS5D01G498300 chr1B 100.000 42 0 0 2154 2195 626147099 626147140 7.560000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G498300 chr5D 528213965 528216513 2548 True 4708.000000 4708 100.000000 1 2549 1 chr5D.!!$R1 2548
1 TraesCS5D01G498300 chr5A 656044025 656046198 2173 True 932.133333 2165 91.308667 7 2153 3 chr5A.!!$R2 2146
2 TraesCS5D01G498300 chr5B 664979501 664981481 1980 True 1146.500000 1783 88.262500 6 2045 2 chr5B.!!$R1 2039

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
994 1078 0.251634 GGCAGAGAAACAGAGGGAGG 59.748 60.0 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2456 2614 0.036388 TTTCACCACCTCTCCATCGC 60.036 55.0 0.0 0.0 0.0 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.436998 GGGCGTCGAGGTCACCAG 62.437 72.222 12.28 0.00 0.00 4.00
47 48 2.276201 TGGAGTTTGTTCACACGACTG 58.724 47.619 0.00 0.00 0.00 3.51
112 114 3.684305 TCAACATCGCCAACAACATCTAG 59.316 43.478 0.00 0.00 0.00 2.43
126 128 3.470709 ACATCTAGAATGCGGATGTTGG 58.529 45.455 8.82 0.00 44.93 3.77
134 136 1.208706 TGCGGATGTTGGGGATCTAA 58.791 50.000 0.00 0.00 0.00 2.10
198 200 6.369890 ACATATGCACTCAAACTACACAAGAG 59.630 38.462 1.58 0.00 0.00 2.85
200 202 4.371786 TGCACTCAAACTACACAAGAGAG 58.628 43.478 0.00 0.00 0.00 3.20
239 241 4.827036 ACTATATGTGGTACTCCCTCCA 57.173 45.455 0.00 0.00 0.00 3.86
253 255 4.410555 ACTCCCTCCATCCAGAAATACTTC 59.589 45.833 0.00 0.00 0.00 3.01
255 257 5.039645 TCCCTCCATCCAGAAATACTTCTT 58.960 41.667 0.00 0.00 40.05 2.52
367 369 3.624326 TTCACAAGAAAATGGCTCACG 57.376 42.857 0.00 0.00 0.00 4.35
428 470 6.649141 TCTCGCACACACAATCTATTAAGTTT 59.351 34.615 0.00 0.00 0.00 2.66
452 494 3.454042 GCCGATTTTTGCCACATTTTC 57.546 42.857 0.00 0.00 0.00 2.29
453 495 2.805099 GCCGATTTTTGCCACATTTTCA 59.195 40.909 0.00 0.00 0.00 2.69
454 496 3.363871 GCCGATTTTTGCCACATTTTCAC 60.364 43.478 0.00 0.00 0.00 3.18
455 497 3.806521 CCGATTTTTGCCACATTTTCACA 59.193 39.130 0.00 0.00 0.00 3.58
456 498 4.272018 CCGATTTTTGCCACATTTTCACAA 59.728 37.500 0.00 0.00 0.00 3.33
457 499 5.049543 CCGATTTTTGCCACATTTTCACAAT 60.050 36.000 0.00 0.00 0.00 2.71
458 500 6.072733 CGATTTTTGCCACATTTTCACAATC 58.927 36.000 0.00 0.00 0.00 2.67
459 501 6.073657 CGATTTTTGCCACATTTTCACAATCT 60.074 34.615 0.00 0.00 0.00 2.40
460 502 7.116090 CGATTTTTGCCACATTTTCACAATCTA 59.884 33.333 0.00 0.00 0.00 1.98
461 503 8.851541 ATTTTTGCCACATTTTCACAATCTAT 57.148 26.923 0.00 0.00 0.00 1.98
462 504 8.674263 TTTTTGCCACATTTTCACAATCTATT 57.326 26.923 0.00 0.00 0.00 1.73
463 505 9.770097 TTTTTGCCACATTTTCACAATCTATTA 57.230 25.926 0.00 0.00 0.00 0.98
464 506 9.770097 TTTTGCCACATTTTCACAATCTATTAA 57.230 25.926 0.00 0.00 0.00 1.40
465 507 8.984891 TTGCCACATTTTCACAATCTATTAAG 57.015 30.769 0.00 0.00 0.00 1.85
466 508 8.121305 TGCCACATTTTCACAATCTATTAAGT 57.879 30.769 0.00 0.00 0.00 2.24
467 509 9.237187 TGCCACATTTTCACAATCTATTAAGTA 57.763 29.630 0.00 0.00 0.00 2.24
468 510 9.503427 GCCACATTTTCACAATCTATTAAGTAC 57.497 33.333 0.00 0.00 0.00 2.73
469 511 9.702726 CCACATTTTCACAATCTATTAAGTACG 57.297 33.333 0.00 0.00 0.00 3.67
474 516 9.701098 TTTTCACAATCTATTAAGTACGTGACT 57.299 29.630 0.00 0.00 41.56 3.41
475 517 8.683550 TTCACAATCTATTAAGTACGTGACTG 57.316 34.615 0.00 0.00 38.87 3.51
476 518 8.047413 TCACAATCTATTAAGTACGTGACTGA 57.953 34.615 0.00 0.00 38.87 3.41
477 519 8.683615 TCACAATCTATTAAGTACGTGACTGAT 58.316 33.333 0.00 0.00 38.87 2.90
478 520 9.302345 CACAATCTATTAAGTACGTGACTGATT 57.698 33.333 0.00 1.04 38.87 2.57
479 521 9.871238 ACAATCTATTAAGTACGTGACTGATTT 57.129 29.630 0.00 0.00 38.87 2.17
482 524 8.697846 TCTATTAAGTACGTGACTGATTTTGG 57.302 34.615 0.00 0.00 38.87 3.28
483 525 5.600908 TTAAGTACGTGACTGATTTTGGC 57.399 39.130 0.00 0.00 38.87 4.52
484 526 2.423577 AGTACGTGACTGATTTTGGCC 58.576 47.619 0.00 0.00 36.87 5.36
485 527 2.147958 GTACGTGACTGATTTTGGCCA 58.852 47.619 0.00 0.00 0.00 5.36
486 528 0.951558 ACGTGACTGATTTTGGCCAC 59.048 50.000 3.88 0.00 0.00 5.01
487 529 0.950836 CGTGACTGATTTTGGCCACA 59.049 50.000 3.88 0.00 0.00 4.17
488 530 1.541147 CGTGACTGATTTTGGCCACAT 59.459 47.619 3.88 0.00 0.00 3.21
489 531 2.030007 CGTGACTGATTTTGGCCACATT 60.030 45.455 3.88 0.00 0.00 2.71
490 532 3.552684 CGTGACTGATTTTGGCCACATTT 60.553 43.478 3.88 0.00 0.00 2.32
491 533 4.379652 GTGACTGATTTTGGCCACATTTT 58.620 39.130 3.88 0.00 0.00 1.82
502 544 2.228582 GGCCACATTTTCCCAAATTTGC 59.771 45.455 12.92 0.00 31.25 3.68
532 574 0.706433 ATCCCTGGCAAGTTCATGGT 59.294 50.000 0.00 0.00 0.00 3.55
545 587 2.671619 ATGGTTCAACGGTGGGCG 60.672 61.111 0.00 0.00 0.00 6.13
578 647 2.698855 TGGCTCCATGCTCTCTAAAC 57.301 50.000 0.00 0.00 42.39 2.01
589 658 5.924475 TGCTCTCTAAACGAAAAAGGAAG 57.076 39.130 0.00 0.00 0.00 3.46
603 672 7.818446 ACGAAAAAGGAAGATCTCTACTAAACC 59.182 37.037 0.00 0.00 0.00 3.27
719 789 1.215382 CGACGCTCCCATCAACTCA 59.785 57.895 0.00 0.00 0.00 3.41
724 794 3.157087 ACGCTCCCATCAACTCAAAAAT 58.843 40.909 0.00 0.00 0.00 1.82
725 795 3.573967 ACGCTCCCATCAACTCAAAAATT 59.426 39.130 0.00 0.00 0.00 1.82
733 809 8.709308 TCCCATCAACTCAAAAATTAAAAAGGA 58.291 29.630 0.00 0.00 0.00 3.36
900 978 6.151985 CGTACAGATAGAAGATAGAGGCCATT 59.848 42.308 5.01 0.00 0.00 3.16
923 1001 1.376553 GAGAGACCCAGCAACCAGC 60.377 63.158 0.00 0.00 46.19 4.85
934 1012 1.239968 GCAACCAGCAACCAGAGAGG 61.240 60.000 0.00 0.00 44.79 3.69
935 1013 1.073897 AACCAGCAACCAGAGAGGC 59.926 57.895 0.00 0.00 43.14 4.70
937 1015 2.752358 CAGCAACCAGAGAGGCCA 59.248 61.111 5.01 0.00 43.14 5.36
938 1016 1.302285 CAGCAACCAGAGAGGCCAT 59.698 57.895 5.01 0.00 43.14 4.40
939 1017 0.543277 CAGCAACCAGAGAGGCCATA 59.457 55.000 5.01 0.00 43.14 2.74
940 1018 0.835941 AGCAACCAGAGAGGCCATAG 59.164 55.000 5.01 0.00 43.14 2.23
941 1019 0.817229 GCAACCAGAGAGGCCATAGC 60.817 60.000 5.01 0.00 43.14 2.97
990 1068 2.673610 CGAAGAGGCAGAGAAACAGAGG 60.674 54.545 0.00 0.00 0.00 3.69
994 1078 0.251634 GGCAGAGAAACAGAGGGAGG 59.748 60.000 0.00 0.00 0.00 4.30
1023 1107 0.035915 GAAGAAGAAGAAGCCCGGCT 60.036 55.000 5.94 5.94 42.56 5.52
1044 1131 2.467826 GCCGCTGCTGGTGATCTTC 61.468 63.158 11.14 0.00 33.53 2.87
1048 1135 1.078918 CTGCTGGTGATCTTCGGCA 60.079 57.895 17.17 17.17 42.26 5.69
1118 1205 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1119 1206 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
1120 1207 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
1121 1208 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1122 1209 2.277072 CACCACCACCACCACCAA 59.723 61.111 0.00 0.00 0.00 3.67
1128 1215 2.912025 CACCACCACCAAGGCCAC 60.912 66.667 5.01 0.00 43.14 5.01
1165 1254 2.226674 GTCCAAAGCAGAGGTAAGCAAC 59.773 50.000 0.00 0.00 0.00 4.17
1167 1256 2.030805 CCAAAGCAGAGGTAAGCAACAC 60.031 50.000 0.00 0.00 0.00 3.32
1173 1262 3.070018 CAGAGGTAAGCAACACCTTCTG 58.930 50.000 5.50 9.57 46.60 3.02
1185 1274 2.375174 ACACCTTCTGGTTGCATCCTAA 59.625 45.455 14.81 8.31 46.05 2.69
1186 1275 2.749621 CACCTTCTGGTTGCATCCTAAC 59.250 50.000 14.81 0.00 46.05 2.34
1192 1281 1.654023 GGTTGCATCCTAACGCACCC 61.654 60.000 6.56 0.00 38.00 4.61
1197 1286 0.462047 CATCCTAACGCACCCTCCAC 60.462 60.000 0.00 0.00 0.00 4.02
1218 1307 2.104859 CGGAGCAGTGTGGCAGATG 61.105 63.158 0.00 0.00 35.83 2.90
1219 1308 1.297689 GGAGCAGTGTGGCAGATGA 59.702 57.895 0.00 0.00 35.83 2.92
1220 1309 0.743701 GGAGCAGTGTGGCAGATGAG 60.744 60.000 0.00 0.00 35.83 2.90
1221 1310 0.248565 GAGCAGTGTGGCAGATGAGA 59.751 55.000 0.00 0.00 35.83 3.27
1222 1311 0.910338 AGCAGTGTGGCAGATGAGAT 59.090 50.000 0.00 0.00 35.83 2.75
1224 1313 2.502947 AGCAGTGTGGCAGATGAGATTA 59.497 45.455 0.00 0.00 35.83 1.75
1225 1314 3.054875 AGCAGTGTGGCAGATGAGATTAA 60.055 43.478 0.00 0.00 35.83 1.40
1227 1316 4.024218 GCAGTGTGGCAGATGAGATTAATC 60.024 45.833 7.41 7.41 0.00 1.75
1229 1318 5.236695 CAGTGTGGCAGATGAGATTAATCAG 59.763 44.000 17.56 1.83 31.44 2.90
1232 1321 4.820716 GTGGCAGATGAGATTAATCAGCTT 59.179 41.667 17.56 7.22 43.13 3.74
1233 1322 4.820173 TGGCAGATGAGATTAATCAGCTTG 59.180 41.667 17.56 9.63 43.13 4.01
1234 1323 4.820716 GGCAGATGAGATTAATCAGCTTGT 59.179 41.667 17.56 3.73 43.13 3.16
1235 1324 5.277876 GGCAGATGAGATTAATCAGCTTGTG 60.278 44.000 17.56 14.51 43.13 3.33
1236 1325 5.296283 GCAGATGAGATTAATCAGCTTGTGT 59.704 40.000 17.56 0.00 43.13 3.72
1237 1326 6.183360 GCAGATGAGATTAATCAGCTTGTGTT 60.183 38.462 17.56 0.00 43.13 3.32
1238 1327 7.187480 CAGATGAGATTAATCAGCTTGTGTTG 58.813 38.462 17.56 1.25 43.13 3.33
1239 1328 6.883217 AGATGAGATTAATCAGCTTGTGTTGT 59.117 34.615 17.56 0.00 43.13 3.32
1240 1329 6.245115 TGAGATTAATCAGCTTGTGTTGTG 57.755 37.500 17.56 0.00 0.00 3.33
1272 1363 4.729552 TGGGGATGAAATTATCTCTGGG 57.270 45.455 0.00 0.00 0.00 4.45
1384 1478 2.426023 GGTGCACCAAGTCGGACT 59.574 61.111 31.23 4.45 38.63 3.85
1451 1545 4.980805 GTGCCGGGACTGCGTCAA 62.981 66.667 20.19 0.00 43.04 3.18
1660 1754 3.336568 AGATGCCAGCCAGCCACT 61.337 61.111 0.00 0.00 0.00 4.00
1661 1755 1.976132 GAGATGCCAGCCAGCCACTA 61.976 60.000 0.00 0.00 0.00 2.74
1662 1756 1.150081 GATGCCAGCCAGCCACTAT 59.850 57.895 0.00 0.00 0.00 2.12
1749 1879 8.780249 GCTTCTTGTGTAAAGTGGAGTATAAAA 58.220 33.333 0.00 0.00 0.00 1.52
1802 1937 1.098869 GAGTCTCGTCCTCTGCATCA 58.901 55.000 0.00 0.00 0.00 3.07
1899 2034 3.252215 CCTACTCTCCTACTGATCTTGCG 59.748 52.174 0.00 0.00 0.00 4.85
1900 2035 1.407258 ACTCTCCTACTGATCTTGCGC 59.593 52.381 0.00 0.00 0.00 6.09
2037 2177 2.490509 TGCACAGAGAGCATGGAAAATG 59.509 45.455 0.00 0.00 37.02 2.32
2097 2237 9.685005 CTATTACACGTTACTTTACTTTGCATC 57.315 33.333 0.00 0.00 0.00 3.91
2098 2238 5.994887 ACACGTTACTTTACTTTGCATCA 57.005 34.783 0.00 0.00 0.00 3.07
2099 2239 6.366315 ACACGTTACTTTACTTTGCATCAA 57.634 33.333 0.00 0.00 0.00 2.57
2100 2240 6.196571 ACACGTTACTTTACTTTGCATCAAC 58.803 36.000 0.00 0.00 0.00 3.18
2101 2241 5.623673 CACGTTACTTTACTTTGCATCAACC 59.376 40.000 0.00 0.00 0.00 3.77
2102 2242 5.297278 ACGTTACTTTACTTTGCATCAACCA 59.703 36.000 0.00 0.00 0.00 3.67
2103 2243 5.851177 CGTTACTTTACTTTGCATCAACCAG 59.149 40.000 0.00 0.00 0.00 4.00
2135 2293 1.202818 GGAAAGGGGAATATGCGCTCT 60.203 52.381 9.73 0.00 29.21 4.09
2143 2301 2.411904 GAATATGCGCTCTCAGGAAGG 58.588 52.381 9.73 0.00 0.00 3.46
2147 2305 0.461548 TGCGCTCTCAGGAAGGTATG 59.538 55.000 9.73 0.00 0.00 2.39
2149 2307 0.749649 CGCTCTCAGGAAGGTATGCT 59.250 55.000 0.00 0.00 0.00 3.79
2153 2311 3.576118 GCTCTCAGGAAGGTATGCTATGA 59.424 47.826 0.00 0.00 0.00 2.15
2154 2312 4.560513 GCTCTCAGGAAGGTATGCTATGAC 60.561 50.000 0.00 0.00 0.00 3.06
2155 2313 3.898123 TCTCAGGAAGGTATGCTATGACC 59.102 47.826 0.00 0.00 35.83 4.02
2156 2314 2.628178 TCAGGAAGGTATGCTATGACCG 59.372 50.000 0.00 0.00 40.91 4.79
2157 2315 1.344763 AGGAAGGTATGCTATGACCGC 59.655 52.381 0.00 0.00 40.91 5.68
2158 2316 1.070134 GGAAGGTATGCTATGACCGCA 59.930 52.381 0.00 0.00 40.91 5.69
2160 2318 2.462456 AGGTATGCTATGACCGCATG 57.538 50.000 7.68 0.00 46.69 4.06
2161 2319 1.002430 AGGTATGCTATGACCGCATGG 59.998 52.381 7.68 0.00 46.69 3.66
2162 2320 1.442769 GTATGCTATGACCGCATGGG 58.557 55.000 2.06 2.06 46.69 4.00
2163 2321 1.001974 GTATGCTATGACCGCATGGGA 59.998 52.381 12.02 0.00 46.69 4.37
2164 2322 0.250467 ATGCTATGACCGCATGGGAC 60.250 55.000 12.02 5.72 45.66 4.46
2165 2323 2.927598 ATGCTATGACCGCATGGGACA 61.928 52.381 12.02 11.20 45.66 4.02
2178 2336 2.666272 TGGGACATGTGGTTAGCAAA 57.334 45.000 1.15 0.00 0.00 3.68
2179 2337 2.950781 TGGGACATGTGGTTAGCAAAA 58.049 42.857 1.15 0.00 0.00 2.44
2180 2338 3.505386 TGGGACATGTGGTTAGCAAAAT 58.495 40.909 1.15 0.00 0.00 1.82
2181 2339 3.509575 TGGGACATGTGGTTAGCAAAATC 59.490 43.478 1.15 0.00 0.00 2.17
2182 2340 3.509575 GGGACATGTGGTTAGCAAAATCA 59.490 43.478 1.15 0.00 0.00 2.57
2183 2341 4.021544 GGGACATGTGGTTAGCAAAATCAA 60.022 41.667 1.15 0.00 0.00 2.57
2184 2342 5.510520 GGGACATGTGGTTAGCAAAATCAAA 60.511 40.000 1.15 0.00 0.00 2.69
2185 2343 5.988561 GGACATGTGGTTAGCAAAATCAAAA 59.011 36.000 1.15 0.00 0.00 2.44
2186 2344 6.650390 GGACATGTGGTTAGCAAAATCAAAAT 59.350 34.615 1.15 0.00 0.00 1.82
2187 2345 7.173047 GGACATGTGGTTAGCAAAATCAAAATT 59.827 33.333 1.15 0.00 0.00 1.82
2188 2346 8.086851 ACATGTGGTTAGCAAAATCAAAATTC 57.913 30.769 0.00 0.00 0.00 2.17
2189 2347 7.714377 ACATGTGGTTAGCAAAATCAAAATTCA 59.286 29.630 0.00 0.00 0.00 2.57
2190 2348 8.723311 CATGTGGTTAGCAAAATCAAAATTCAT 58.277 29.630 0.00 0.00 0.00 2.57
2191 2349 9.941325 ATGTGGTTAGCAAAATCAAAATTCATA 57.059 25.926 0.00 0.00 0.00 2.15
2192 2350 9.941325 TGTGGTTAGCAAAATCAAAATTCATAT 57.059 25.926 0.00 0.00 0.00 1.78
2200 2358 9.822185 GCAAAATCAAAATTCATATAGGAAGGT 57.178 29.630 5.98 0.00 0.00 3.50
2209 2367 9.911788 AAATTCATATAGGAAGGTATGCTATGG 57.088 33.333 5.98 0.00 42.10 2.74
2210 2368 8.860517 ATTCATATAGGAAGGTATGCTATGGA 57.139 34.615 5.98 0.00 42.10 3.41
2211 2369 8.860517 TTCATATAGGAAGGTATGCTATGGAT 57.139 34.615 0.00 0.00 42.10 3.41
2212 2370 8.255111 TCATATAGGAAGGTATGCTATGGATG 57.745 38.462 0.43 0.00 42.10 3.51
2213 2371 3.710209 AGGAAGGTATGCTATGGATGC 57.290 47.619 0.00 0.00 0.00 3.91
2214 2372 2.981784 AGGAAGGTATGCTATGGATGCA 59.018 45.455 0.00 0.00 44.95 3.96
2223 2381 4.089408 TGCTATGGATGCATTTAGCTCA 57.911 40.909 25.06 12.45 45.94 4.26
2224 2382 4.070009 TGCTATGGATGCATTTAGCTCAG 58.930 43.478 25.06 5.29 45.94 3.35
2225 2383 4.070716 GCTATGGATGCATTTAGCTCAGT 58.929 43.478 20.98 0.00 45.94 3.41
2226 2384 4.153835 GCTATGGATGCATTTAGCTCAGTC 59.846 45.833 20.98 0.30 45.94 3.51
2227 2385 2.923121 TGGATGCATTTAGCTCAGTCC 58.077 47.619 0.00 0.00 45.94 3.85
2228 2386 2.225467 GGATGCATTTAGCTCAGTCCC 58.775 52.381 0.00 0.00 45.94 4.46
2229 2387 1.869767 GATGCATTTAGCTCAGTCCCG 59.130 52.381 0.00 0.00 45.94 5.14
2230 2388 0.744414 TGCATTTAGCTCAGTCCCGC 60.744 55.000 0.00 0.00 45.94 6.13
2231 2389 1.766143 GCATTTAGCTCAGTCCCGCG 61.766 60.000 0.00 0.00 41.15 6.46
2232 2390 1.521681 ATTTAGCTCAGTCCCGCGC 60.522 57.895 0.00 0.00 0.00 6.86
2233 2391 1.961180 ATTTAGCTCAGTCCCGCGCT 61.961 55.000 5.56 0.00 36.56 5.92
2234 2392 2.835701 TTTAGCTCAGTCCCGCGCTG 62.836 60.000 5.56 2.67 34.14 5.18
2237 2395 4.069232 CTCAGTCCCGCGCTGGAA 62.069 66.667 22.94 6.33 42.00 3.53
2238 2396 3.997064 CTCAGTCCCGCGCTGGAAG 62.997 68.421 22.94 17.37 42.00 3.46
2239 2397 4.069232 CAGTCCCGCGCTGGAAGA 62.069 66.667 22.94 7.54 42.00 2.87
2240 2398 3.311110 AGTCCCGCGCTGGAAGAA 61.311 61.111 22.94 0.00 42.00 2.52
2241 2399 2.358247 GTCCCGCGCTGGAAGAAA 60.358 61.111 22.94 0.00 42.00 2.52
2242 2400 1.745489 GTCCCGCGCTGGAAGAAAT 60.745 57.895 22.94 0.00 42.00 2.17
2243 2401 1.002624 TCCCGCGCTGGAAGAAATT 60.003 52.632 19.06 0.00 42.00 1.82
2244 2402 1.137404 CCCGCGCTGGAAGAAATTG 59.863 57.895 13.28 0.00 42.00 2.32
2245 2403 1.305219 CCCGCGCTGGAAGAAATTGA 61.305 55.000 13.28 0.00 42.00 2.57
2246 2404 0.734889 CCGCGCTGGAAGAAATTGAT 59.265 50.000 12.11 0.00 42.00 2.57
2247 2405 1.268234 CCGCGCTGGAAGAAATTGATC 60.268 52.381 12.11 0.00 42.00 2.92
2248 2406 1.268234 CGCGCTGGAAGAAATTGATCC 60.268 52.381 5.56 0.00 34.07 3.36
2249 2407 1.268234 GCGCTGGAAGAAATTGATCCG 60.268 52.381 0.00 0.00 35.96 4.18
2250 2408 2.009774 CGCTGGAAGAAATTGATCCGT 58.990 47.619 0.00 0.00 35.96 4.69
2251 2409 2.420022 CGCTGGAAGAAATTGATCCGTT 59.580 45.455 0.00 0.00 35.96 4.44
2252 2410 3.119849 CGCTGGAAGAAATTGATCCGTTT 60.120 43.478 0.00 0.00 35.96 3.60
2253 2411 4.094294 CGCTGGAAGAAATTGATCCGTTTA 59.906 41.667 0.00 0.00 35.96 2.01
2254 2412 5.391523 CGCTGGAAGAAATTGATCCGTTTAA 60.392 40.000 0.00 0.00 35.96 1.52
2255 2413 6.564328 GCTGGAAGAAATTGATCCGTTTAAT 58.436 36.000 0.00 0.00 35.96 1.40
2256 2414 7.035612 GCTGGAAGAAATTGATCCGTTTAATT 58.964 34.615 0.00 0.00 35.96 1.40
2257 2415 7.009540 GCTGGAAGAAATTGATCCGTTTAATTG 59.990 37.037 0.00 0.00 35.96 2.32
2258 2416 7.891561 TGGAAGAAATTGATCCGTTTAATTGT 58.108 30.769 0.00 0.00 35.96 2.71
2259 2417 7.812191 TGGAAGAAATTGATCCGTTTAATTGTG 59.188 33.333 0.00 0.00 35.96 3.33
2260 2418 8.026607 GGAAGAAATTGATCCGTTTAATTGTGA 58.973 33.333 0.00 0.00 0.00 3.58
2261 2419 8.970691 AAGAAATTGATCCGTTTAATTGTGAG 57.029 30.769 0.00 0.00 0.00 3.51
2262 2420 8.110860 AGAAATTGATCCGTTTAATTGTGAGT 57.889 30.769 0.00 0.00 0.00 3.41
2263 2421 8.237267 AGAAATTGATCCGTTTAATTGTGAGTC 58.763 33.333 0.00 0.00 0.00 3.36
2264 2422 5.524511 TTGATCCGTTTAATTGTGAGTCG 57.475 39.130 0.00 0.00 0.00 4.18
2265 2423 3.369756 TGATCCGTTTAATTGTGAGTCGC 59.630 43.478 0.00 0.00 0.00 5.19
2266 2424 1.722464 TCCGTTTAATTGTGAGTCGCG 59.278 47.619 0.00 0.00 0.00 5.87
2267 2425 1.458064 CCGTTTAATTGTGAGTCGCGT 59.542 47.619 5.77 0.00 0.00 6.01
2268 2426 2.471749 CCGTTTAATTGTGAGTCGCGTC 60.472 50.000 5.77 0.00 0.00 5.19
2269 2427 2.154198 CGTTTAATTGTGAGTCGCGTCA 59.846 45.455 5.77 0.00 0.00 4.35
2270 2428 3.466836 GTTTAATTGTGAGTCGCGTCAC 58.533 45.455 19.65 19.65 46.08 3.67
2275 2433 1.201825 GTGAGTCGCGTCACAAAGC 59.798 57.895 21.04 0.46 45.34 3.51
2276 2434 1.067416 TGAGTCGCGTCACAAAGCT 59.933 52.632 5.77 0.00 0.00 3.74
2277 2435 1.215014 TGAGTCGCGTCACAAAGCTG 61.215 55.000 5.77 0.00 0.00 4.24
2278 2436 1.891060 GAGTCGCGTCACAAAGCTGG 61.891 60.000 5.77 0.00 0.00 4.85
2279 2437 3.345808 TCGCGTCACAAAGCTGGC 61.346 61.111 5.77 0.00 0.00 4.85
2280 2438 3.648982 CGCGTCACAAAGCTGGCA 61.649 61.111 0.00 0.00 0.00 4.92
2281 2439 2.956987 GCGTCACAAAGCTGGCAT 59.043 55.556 0.00 0.00 0.00 4.40
2282 2440 1.443194 GCGTCACAAAGCTGGCATG 60.443 57.895 0.00 0.00 0.00 4.06
2283 2441 1.855213 GCGTCACAAAGCTGGCATGA 61.855 55.000 0.00 0.00 0.00 3.07
2284 2442 0.110056 CGTCACAAAGCTGGCATGAC 60.110 55.000 0.00 6.59 37.02 3.06
2285 2443 0.110056 GTCACAAAGCTGGCATGACG 60.110 55.000 0.00 0.00 31.19 4.35
2286 2444 0.250252 TCACAAAGCTGGCATGACGA 60.250 50.000 0.00 0.00 0.00 4.20
2287 2445 0.592637 CACAAAGCTGGCATGACGAA 59.407 50.000 0.00 0.00 0.00 3.85
2288 2446 0.593128 ACAAAGCTGGCATGACGAAC 59.407 50.000 0.00 0.00 0.00 3.95
2289 2447 0.109597 CAAAGCTGGCATGACGAACC 60.110 55.000 0.00 0.00 0.00 3.62
2290 2448 0.250901 AAAGCTGGCATGACGAACCT 60.251 50.000 0.00 0.00 0.00 3.50
2291 2449 0.250901 AAGCTGGCATGACGAACCTT 60.251 50.000 0.00 0.00 0.00 3.50
2292 2450 0.613260 AGCTGGCATGACGAACCTTA 59.387 50.000 0.00 0.00 0.00 2.69
2293 2451 1.003118 AGCTGGCATGACGAACCTTAA 59.997 47.619 0.00 0.00 0.00 1.85
2294 2452 1.810151 GCTGGCATGACGAACCTTAAA 59.190 47.619 0.00 0.00 0.00 1.52
2295 2453 2.159517 GCTGGCATGACGAACCTTAAAG 60.160 50.000 0.00 0.00 0.00 1.85
2296 2454 1.810151 TGGCATGACGAACCTTAAAGC 59.190 47.619 0.00 0.00 0.00 3.51
2297 2455 1.810151 GGCATGACGAACCTTAAAGCA 59.190 47.619 0.00 0.00 0.00 3.91
2298 2456 2.414161 GGCATGACGAACCTTAAAGCAC 60.414 50.000 0.00 0.00 0.00 4.40
2299 2457 2.414161 GCATGACGAACCTTAAAGCACC 60.414 50.000 0.00 0.00 0.00 5.01
2300 2458 2.922740 TGACGAACCTTAAAGCACCT 57.077 45.000 0.00 0.00 0.00 4.00
2301 2459 3.202829 TGACGAACCTTAAAGCACCTT 57.797 42.857 0.00 0.00 0.00 3.50
2302 2460 3.547746 TGACGAACCTTAAAGCACCTTT 58.452 40.909 0.00 0.00 37.46 3.11
2303 2461 3.314080 TGACGAACCTTAAAGCACCTTTG 59.686 43.478 0.00 0.00 35.21 2.77
2304 2462 2.621526 ACGAACCTTAAAGCACCTTTGG 59.378 45.455 0.00 0.00 35.21 3.28
2305 2463 2.030274 CGAACCTTAAAGCACCTTTGGG 60.030 50.000 0.72 5.56 35.21 4.12
2307 2465 3.040655 ACCTTAAAGCACCTTTGGGTT 57.959 42.857 9.66 0.00 44.73 4.11
2308 2466 3.380393 ACCTTAAAGCACCTTTGGGTTT 58.620 40.909 9.66 0.00 44.73 3.27
2309 2467 3.133901 ACCTTAAAGCACCTTTGGGTTTG 59.866 43.478 9.66 0.00 44.73 2.93
2310 2468 3.494223 CCTTAAAGCACCTTTGGGTTTGG 60.494 47.826 0.00 0.00 44.73 3.28
2311 2469 0.836606 AAAGCACCTTTGGGTTTGGG 59.163 50.000 0.00 0.00 44.73 4.12
2312 2470 0.326143 AAGCACCTTTGGGTTTGGGT 60.326 50.000 0.00 0.00 44.73 4.51
2313 2471 0.759060 AGCACCTTTGGGTTTGGGTC 60.759 55.000 0.00 0.00 44.73 4.46
2314 2472 0.759060 GCACCTTTGGGTTTGGGTCT 60.759 55.000 0.00 0.00 44.73 3.85
2315 2473 1.479757 GCACCTTTGGGTTTGGGTCTA 60.480 52.381 0.00 0.00 44.73 2.59
2316 2474 2.514803 CACCTTTGGGTTTGGGTCTAG 58.485 52.381 0.00 0.00 44.73 2.43
2317 2475 1.203013 ACCTTTGGGTTTGGGTCTAGC 60.203 52.381 0.00 0.00 44.73 3.42
2318 2476 1.203001 CCTTTGGGTTTGGGTCTAGCA 60.203 52.381 0.00 0.00 0.00 3.49
2319 2477 2.162681 CTTTGGGTTTGGGTCTAGCAG 58.837 52.381 0.00 0.00 0.00 4.24
2320 2478 0.404040 TTGGGTTTGGGTCTAGCAGG 59.596 55.000 0.00 0.00 0.00 4.85
2321 2479 1.303282 GGGTTTGGGTCTAGCAGGG 59.697 63.158 0.00 0.00 0.00 4.45
2322 2480 1.303282 GGTTTGGGTCTAGCAGGGG 59.697 63.158 0.00 0.00 0.00 4.79
2323 2481 1.303282 GTTTGGGTCTAGCAGGGGG 59.697 63.158 0.00 0.00 0.00 5.40
2324 2482 2.612493 TTTGGGTCTAGCAGGGGGC 61.612 63.158 0.00 0.00 45.30 5.80
2333 2491 2.514824 GCAGGGGGCGAATCAGTC 60.515 66.667 0.00 0.00 0.00 3.51
2344 2502 3.519908 CGAATCAGTCGTTTTTCTGCA 57.480 42.857 0.00 0.00 45.09 4.41
2345 2503 3.473367 CGAATCAGTCGTTTTTCTGCAG 58.527 45.455 7.63 7.63 45.09 4.41
2346 2504 3.665323 CGAATCAGTCGTTTTTCTGCAGG 60.665 47.826 15.13 0.00 45.09 4.85
2347 2505 0.944386 TCAGTCGTTTTTCTGCAGGC 59.056 50.000 15.13 0.00 0.00 4.85
2348 2506 0.662619 CAGTCGTTTTTCTGCAGGCA 59.337 50.000 15.13 0.00 0.00 4.75
2349 2507 0.947244 AGTCGTTTTTCTGCAGGCAG 59.053 50.000 15.13 14.97 44.86 4.85
2350 2508 0.040067 GTCGTTTTTCTGCAGGCAGG 60.040 55.000 20.19 4.25 43.75 4.85
2351 2509 1.372128 CGTTTTTCTGCAGGCAGGC 60.372 57.895 20.19 1.23 43.75 4.85
2352 2510 1.005748 GTTTTTCTGCAGGCAGGCC 60.006 57.895 20.19 0.97 43.75 5.19
2353 2511 2.209315 TTTTTCTGCAGGCAGGCCC 61.209 57.895 20.19 0.00 43.75 5.80
2368 2526 3.197790 CCCGAGCGATGCAACCTG 61.198 66.667 0.00 0.00 0.00 4.00
2369 2527 2.125552 CCGAGCGATGCAACCTGA 60.126 61.111 0.00 0.00 0.00 3.86
2370 2528 2.169789 CCGAGCGATGCAACCTGAG 61.170 63.158 0.00 0.00 0.00 3.35
2371 2529 2.169789 CGAGCGATGCAACCTGAGG 61.170 63.158 0.00 0.00 0.00 3.86
2372 2530 2.437359 AGCGATGCAACCTGAGGC 60.437 61.111 0.00 0.00 0.00 4.70
2373 2531 2.747460 GCGATGCAACCTGAGGCA 60.747 61.111 0.00 0.00 45.23 4.75
2374 2532 3.044059 GCGATGCAACCTGAGGCAC 62.044 63.158 0.00 0.00 43.75 5.01
2375 2533 2.743752 CGATGCAACCTGAGGCACG 61.744 63.158 0.00 0.00 43.75 5.34
2376 2534 1.672356 GATGCAACCTGAGGCACGT 60.672 57.895 0.00 0.00 43.75 4.49
2377 2535 1.915614 GATGCAACCTGAGGCACGTG 61.916 60.000 12.28 12.28 43.75 4.49
2378 2536 3.357079 GCAACCTGAGGCACGTGG 61.357 66.667 18.88 1.07 0.00 4.94
2379 2537 2.669569 CAACCTGAGGCACGTGGG 60.670 66.667 18.88 11.95 0.00 4.61
2380 2538 3.168528 AACCTGAGGCACGTGGGT 61.169 61.111 18.88 12.65 0.00 4.51
2382 2540 3.941188 CCTGAGGCACGTGGGTGT 61.941 66.667 18.88 0.00 46.13 4.16
2383 2541 2.666190 CTGAGGCACGTGGGTGTG 60.666 66.667 18.88 0.00 46.13 3.82
2384 2542 4.248842 TGAGGCACGTGGGTGTGG 62.249 66.667 18.88 0.00 46.13 4.17
2405 2563 4.012895 GTTGCACACGCGGAGGTG 62.013 66.667 19.28 19.28 42.97 4.00
2409 2567 3.991051 CACACGCGGAGGTGGTCT 61.991 66.667 12.47 0.00 42.23 3.85
2410 2568 3.681835 ACACGCGGAGGTGGTCTC 61.682 66.667 12.47 0.00 42.23 3.36
2411 2569 3.680786 CACGCGGAGGTGGTCTCA 61.681 66.667 12.47 0.00 44.19 3.27
2412 2570 2.915659 ACGCGGAGGTGGTCTCAA 60.916 61.111 12.47 0.00 44.19 3.02
2413 2571 2.125912 CGCGGAGGTGGTCTCAAG 60.126 66.667 0.00 0.00 44.19 3.02
2414 2572 2.266055 GCGGAGGTGGTCTCAAGG 59.734 66.667 0.00 0.00 44.19 3.61
2415 2573 2.266055 CGGAGGTGGTCTCAAGGC 59.734 66.667 0.00 0.00 44.19 4.35
2416 2574 2.266055 GGAGGTGGTCTCAAGGCG 59.734 66.667 0.00 0.00 44.19 5.52
2417 2575 2.584391 GGAGGTGGTCTCAAGGCGT 61.584 63.158 0.00 0.00 44.19 5.68
2418 2576 1.371558 GAGGTGGTCTCAAGGCGTT 59.628 57.895 0.00 0.00 42.02 4.84
2419 2577 0.951040 GAGGTGGTCTCAAGGCGTTG 60.951 60.000 12.91 12.91 42.02 4.10
2420 2578 2.617274 GGTGGTCTCAAGGCGTTGC 61.617 63.158 14.22 1.19 33.23 4.17
2421 2579 2.664851 TGGTCTCAAGGCGTTGCG 60.665 61.111 14.22 8.53 33.23 4.85
2422 2580 2.665185 GGTCTCAAGGCGTTGCGT 60.665 61.111 14.22 0.00 33.23 5.24
2423 2581 2.251642 GGTCTCAAGGCGTTGCGTT 61.252 57.895 14.22 0.00 37.10 4.84
2427 2585 4.393308 CAAGGCGTTGCGTTGTTT 57.607 50.000 14.18 0.00 45.48 2.83
2428 2586 2.203599 CAAGGCGTTGCGTTGTTTC 58.796 52.632 14.18 0.00 45.48 2.78
2429 2587 0.248458 CAAGGCGTTGCGTTGTTTCT 60.248 50.000 14.18 0.00 45.48 2.52
2430 2588 0.454196 AAGGCGTTGCGTTGTTTCTT 59.546 45.000 0.00 0.00 35.29 2.52
2431 2589 0.248458 AGGCGTTGCGTTGTTTCTTG 60.248 50.000 0.00 0.00 0.00 3.02
2432 2590 0.248296 GGCGTTGCGTTGTTTCTTGA 60.248 50.000 0.00 0.00 0.00 3.02
2433 2591 1.540407 GCGTTGCGTTGTTTCTTGAA 58.460 45.000 0.00 0.00 0.00 2.69
2434 2592 1.512771 GCGTTGCGTTGTTTCTTGAAG 59.487 47.619 0.00 0.00 0.00 3.02
2435 2593 2.108700 CGTTGCGTTGTTTCTTGAAGG 58.891 47.619 0.00 0.00 0.00 3.46
2436 2594 2.223157 CGTTGCGTTGTTTCTTGAAGGA 60.223 45.455 0.00 0.00 0.00 3.36
2437 2595 3.363178 GTTGCGTTGTTTCTTGAAGGAG 58.637 45.455 0.00 0.00 0.00 3.69
2438 2596 2.639065 TGCGTTGTTTCTTGAAGGAGT 58.361 42.857 0.00 0.00 0.00 3.85
2439 2597 3.013921 TGCGTTGTTTCTTGAAGGAGTT 58.986 40.909 0.00 0.00 0.00 3.01
2440 2598 3.181501 TGCGTTGTTTCTTGAAGGAGTTG 60.182 43.478 0.00 0.00 0.00 3.16
2441 2599 3.792124 GCGTTGTTTCTTGAAGGAGTTGG 60.792 47.826 0.00 0.00 0.00 3.77
2442 2600 3.243068 CGTTGTTTCTTGAAGGAGTTGGG 60.243 47.826 0.00 0.00 0.00 4.12
2443 2601 2.944129 TGTTTCTTGAAGGAGTTGGGG 58.056 47.619 0.00 0.00 0.00 4.96
2444 2602 2.512056 TGTTTCTTGAAGGAGTTGGGGA 59.488 45.455 0.00 0.00 0.00 4.81
2445 2603 3.140144 TGTTTCTTGAAGGAGTTGGGGAT 59.860 43.478 0.00 0.00 0.00 3.85
2446 2604 3.439857 TTCTTGAAGGAGTTGGGGATG 57.560 47.619 0.00 0.00 0.00 3.51
2447 2605 2.348472 TCTTGAAGGAGTTGGGGATGT 58.652 47.619 0.00 0.00 0.00 3.06
2448 2606 2.040278 TCTTGAAGGAGTTGGGGATGTG 59.960 50.000 0.00 0.00 0.00 3.21
2449 2607 0.698238 TGAAGGAGTTGGGGATGTGG 59.302 55.000 0.00 0.00 0.00 4.17
2450 2608 0.698818 GAAGGAGTTGGGGATGTGGT 59.301 55.000 0.00 0.00 0.00 4.16
2451 2609 1.075536 GAAGGAGTTGGGGATGTGGTT 59.924 52.381 0.00 0.00 0.00 3.67
2452 2610 0.698818 AGGAGTTGGGGATGTGGTTC 59.301 55.000 0.00 0.00 0.00 3.62
2453 2611 0.404040 GGAGTTGGGGATGTGGTTCA 59.596 55.000 0.00 0.00 0.00 3.18
2454 2612 1.005924 GGAGTTGGGGATGTGGTTCAT 59.994 52.381 0.00 0.00 39.77 2.57
2455 2613 2.094675 GAGTTGGGGATGTGGTTCATG 58.905 52.381 0.00 0.00 36.83 3.07
2456 2614 1.185315 GTTGGGGATGTGGTTCATGG 58.815 55.000 0.00 0.00 36.83 3.66
2457 2615 0.614415 TTGGGGATGTGGTTCATGGC 60.614 55.000 0.00 0.00 36.83 4.40
2458 2616 2.120909 GGGGATGTGGTTCATGGCG 61.121 63.158 0.00 0.00 36.83 5.69
2459 2617 1.077787 GGGATGTGGTTCATGGCGA 60.078 57.895 0.00 0.00 36.83 5.54
2460 2618 0.466189 GGGATGTGGTTCATGGCGAT 60.466 55.000 0.00 0.00 36.83 4.58
2461 2619 0.664761 GGATGTGGTTCATGGCGATG 59.335 55.000 1.66 1.66 36.83 3.84
2462 2620 0.664761 GATGTGGTTCATGGCGATGG 59.335 55.000 8.98 0.00 36.83 3.51
2463 2621 0.255604 ATGTGGTTCATGGCGATGGA 59.744 50.000 8.98 0.00 35.19 3.41
2464 2622 0.392863 TGTGGTTCATGGCGATGGAG 60.393 55.000 8.98 0.00 0.00 3.86
2465 2623 0.107703 GTGGTTCATGGCGATGGAGA 60.108 55.000 8.98 0.00 0.00 3.71
2466 2624 0.178767 TGGTTCATGGCGATGGAGAG 59.821 55.000 8.98 0.00 0.00 3.20
2467 2625 0.533755 GGTTCATGGCGATGGAGAGG 60.534 60.000 8.98 0.00 0.00 3.69
2468 2626 0.179000 GTTCATGGCGATGGAGAGGT 59.821 55.000 8.98 0.00 0.00 3.85
2469 2627 0.178767 TTCATGGCGATGGAGAGGTG 59.821 55.000 8.98 0.00 0.00 4.00
2470 2628 1.227764 CATGGCGATGGAGAGGTGG 60.228 63.158 0.00 0.00 0.00 4.61
2471 2629 1.690633 ATGGCGATGGAGAGGTGGT 60.691 57.895 0.00 0.00 0.00 4.16
2472 2630 1.976132 ATGGCGATGGAGAGGTGGTG 61.976 60.000 0.00 0.00 0.00 4.17
2473 2631 2.359169 GGCGATGGAGAGGTGGTGA 61.359 63.158 0.00 0.00 0.00 4.02
2474 2632 1.596934 GCGATGGAGAGGTGGTGAA 59.403 57.895 0.00 0.00 0.00 3.18
2475 2633 0.036388 GCGATGGAGAGGTGGTGAAA 60.036 55.000 0.00 0.00 0.00 2.69
2476 2634 1.610624 GCGATGGAGAGGTGGTGAAAA 60.611 52.381 0.00 0.00 0.00 2.29
2477 2635 2.778299 CGATGGAGAGGTGGTGAAAAA 58.222 47.619 0.00 0.00 0.00 1.94
2478 2636 2.744202 CGATGGAGAGGTGGTGAAAAAG 59.256 50.000 0.00 0.00 0.00 2.27
2479 2637 3.557054 CGATGGAGAGGTGGTGAAAAAGA 60.557 47.826 0.00 0.00 0.00 2.52
2480 2638 3.492102 TGGAGAGGTGGTGAAAAAGAG 57.508 47.619 0.00 0.00 0.00 2.85
2481 2639 3.045634 TGGAGAGGTGGTGAAAAAGAGA 58.954 45.455 0.00 0.00 0.00 3.10
2482 2640 3.071602 TGGAGAGGTGGTGAAAAAGAGAG 59.928 47.826 0.00 0.00 0.00 3.20
2483 2641 3.558109 GGAGAGGTGGTGAAAAAGAGAGG 60.558 52.174 0.00 0.00 0.00 3.69
2484 2642 3.049344 AGAGGTGGTGAAAAAGAGAGGT 58.951 45.455 0.00 0.00 0.00 3.85
2485 2643 3.142174 GAGGTGGTGAAAAAGAGAGGTG 58.858 50.000 0.00 0.00 0.00 4.00
2486 2644 2.158608 AGGTGGTGAAAAAGAGAGGTGG 60.159 50.000 0.00 0.00 0.00 4.61
2487 2645 2.158667 GGTGGTGAAAAAGAGAGGTGGA 60.159 50.000 0.00 0.00 0.00 4.02
2488 2646 3.551846 GTGGTGAAAAAGAGAGGTGGAA 58.448 45.455 0.00 0.00 0.00 3.53
2489 2647 3.565902 GTGGTGAAAAAGAGAGGTGGAAG 59.434 47.826 0.00 0.00 0.00 3.46
2490 2648 3.458118 TGGTGAAAAAGAGAGGTGGAAGA 59.542 43.478 0.00 0.00 0.00 2.87
2491 2649 4.104738 TGGTGAAAAAGAGAGGTGGAAGAT 59.895 41.667 0.00 0.00 0.00 2.40
2492 2650 4.457257 GGTGAAAAAGAGAGGTGGAAGATG 59.543 45.833 0.00 0.00 0.00 2.90
2493 2651 5.308825 GTGAAAAAGAGAGGTGGAAGATGA 58.691 41.667 0.00 0.00 0.00 2.92
2494 2652 5.411053 GTGAAAAAGAGAGGTGGAAGATGAG 59.589 44.000 0.00 0.00 0.00 2.90
2495 2653 5.072329 TGAAAAAGAGAGGTGGAAGATGAGT 59.928 40.000 0.00 0.00 0.00 3.41
2496 2654 4.550076 AAAGAGAGGTGGAAGATGAGTG 57.450 45.455 0.00 0.00 0.00 3.51
2497 2655 3.464720 AGAGAGGTGGAAGATGAGTGA 57.535 47.619 0.00 0.00 0.00 3.41
2498 2656 3.096092 AGAGAGGTGGAAGATGAGTGAC 58.904 50.000 0.00 0.00 0.00 3.67
2499 2657 2.828520 GAGAGGTGGAAGATGAGTGACA 59.171 50.000 0.00 0.00 0.00 3.58
2500 2658 2.830923 AGAGGTGGAAGATGAGTGACAG 59.169 50.000 0.00 0.00 0.00 3.51
2501 2659 2.564947 GAGGTGGAAGATGAGTGACAGT 59.435 50.000 0.00 0.00 0.00 3.55
2502 2660 2.301296 AGGTGGAAGATGAGTGACAGTG 59.699 50.000 0.00 0.00 0.00 3.66
2503 2661 2.300152 GGTGGAAGATGAGTGACAGTGA 59.700 50.000 0.00 0.00 0.00 3.41
2504 2662 3.583806 GTGGAAGATGAGTGACAGTGAG 58.416 50.000 0.00 0.00 0.00 3.51
2505 2663 3.256879 GTGGAAGATGAGTGACAGTGAGA 59.743 47.826 0.00 0.00 0.00 3.27
2506 2664 3.509184 TGGAAGATGAGTGACAGTGAGAG 59.491 47.826 0.00 0.00 0.00 3.20
2507 2665 3.761218 GGAAGATGAGTGACAGTGAGAGA 59.239 47.826 0.00 0.00 0.00 3.10
2508 2666 4.380444 GGAAGATGAGTGACAGTGAGAGAC 60.380 50.000 0.00 0.00 0.00 3.36
2509 2667 3.760738 AGATGAGTGACAGTGAGAGACA 58.239 45.455 0.00 0.00 0.00 3.41
2510 2668 3.758023 AGATGAGTGACAGTGAGAGACAG 59.242 47.826 0.00 0.00 0.00 3.51
2511 2669 3.214696 TGAGTGACAGTGAGAGACAGA 57.785 47.619 0.00 0.00 0.00 3.41
2512 2670 3.760738 TGAGTGACAGTGAGAGACAGAT 58.239 45.455 0.00 0.00 0.00 2.90
2513 2671 4.911390 TGAGTGACAGTGAGAGACAGATA 58.089 43.478 0.00 0.00 0.00 1.98
2514 2672 4.940654 TGAGTGACAGTGAGAGACAGATAG 59.059 45.833 0.00 0.00 0.00 2.08
2515 2673 4.269183 AGTGACAGTGAGAGACAGATAGG 58.731 47.826 0.00 0.00 0.00 2.57
2516 2674 4.018870 AGTGACAGTGAGAGACAGATAGGA 60.019 45.833 0.00 0.00 0.00 2.94
2517 2675 4.887071 GTGACAGTGAGAGACAGATAGGAT 59.113 45.833 0.00 0.00 0.00 3.24
2518 2676 5.359576 GTGACAGTGAGAGACAGATAGGATT 59.640 44.000 0.00 0.00 0.00 3.01
2519 2677 5.954752 TGACAGTGAGAGACAGATAGGATTT 59.045 40.000 0.00 0.00 0.00 2.17
2520 2678 6.127507 TGACAGTGAGAGACAGATAGGATTTG 60.128 42.308 0.00 0.00 0.00 2.32
2521 2679 5.954752 ACAGTGAGAGACAGATAGGATTTGA 59.045 40.000 0.00 0.00 0.00 2.69
2522 2680 6.096705 ACAGTGAGAGACAGATAGGATTTGAG 59.903 42.308 0.00 0.00 0.00 3.02
2523 2681 6.096705 CAGTGAGAGACAGATAGGATTTGAGT 59.903 42.308 0.00 0.00 0.00 3.41
2524 2682 6.096705 AGTGAGAGACAGATAGGATTTGAGTG 59.903 42.308 0.00 0.00 0.00 3.51
2525 2683 5.954752 TGAGAGACAGATAGGATTTGAGTGT 59.045 40.000 0.00 0.00 0.00 3.55
2526 2684 6.127507 TGAGAGACAGATAGGATTTGAGTGTG 60.128 42.308 0.00 0.00 0.00 3.82
2527 2685 5.128499 AGAGACAGATAGGATTTGAGTGTGG 59.872 44.000 0.00 0.00 0.00 4.17
2528 2686 4.780021 AGACAGATAGGATTTGAGTGTGGT 59.220 41.667 0.00 0.00 0.00 4.16
2529 2687 4.836825 ACAGATAGGATTTGAGTGTGGTG 58.163 43.478 0.00 0.00 0.00 4.17
2530 2688 4.194640 CAGATAGGATTTGAGTGTGGTGG 58.805 47.826 0.00 0.00 0.00 4.61
2531 2689 3.846588 AGATAGGATTTGAGTGTGGTGGT 59.153 43.478 0.00 0.00 0.00 4.16
2532 2690 2.276732 AGGATTTGAGTGTGGTGGTG 57.723 50.000 0.00 0.00 0.00 4.17
2533 2691 1.202927 AGGATTTGAGTGTGGTGGTGG 60.203 52.381 0.00 0.00 0.00 4.61
2534 2692 1.247567 GATTTGAGTGTGGTGGTGGG 58.752 55.000 0.00 0.00 0.00 4.61
2535 2693 0.555769 ATTTGAGTGTGGTGGTGGGT 59.444 50.000 0.00 0.00 0.00 4.51
2536 2694 1.214217 TTTGAGTGTGGTGGTGGGTA 58.786 50.000 0.00 0.00 0.00 3.69
2537 2695 1.214217 TTGAGTGTGGTGGTGGGTAA 58.786 50.000 0.00 0.00 0.00 2.85
2538 2696 0.762418 TGAGTGTGGTGGTGGGTAAG 59.238 55.000 0.00 0.00 0.00 2.34
2539 2697 0.763035 GAGTGTGGTGGTGGGTAAGT 59.237 55.000 0.00 0.00 0.00 2.24
2540 2698 1.972795 GAGTGTGGTGGTGGGTAAGTA 59.027 52.381 0.00 0.00 0.00 2.24
2541 2699 1.975680 AGTGTGGTGGTGGGTAAGTAG 59.024 52.381 0.00 0.00 0.00 2.57
2542 2700 1.002773 GTGTGGTGGTGGGTAAGTAGG 59.997 57.143 0.00 0.00 0.00 3.18
2543 2701 0.616891 GTGGTGGTGGGTAAGTAGGG 59.383 60.000 0.00 0.00 0.00 3.53
2544 2702 0.194080 TGGTGGTGGGTAAGTAGGGT 59.806 55.000 0.00 0.00 0.00 4.34
2545 2703 0.616891 GGTGGTGGGTAAGTAGGGTG 59.383 60.000 0.00 0.00 0.00 4.61
2546 2704 0.616891 GTGGTGGGTAAGTAGGGTGG 59.383 60.000 0.00 0.00 0.00 4.61
2547 2705 0.492730 TGGTGGGTAAGTAGGGTGGA 59.507 55.000 0.00 0.00 0.00 4.02
2548 2706 1.081513 TGGTGGGTAAGTAGGGTGGAT 59.918 52.381 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.751246 CCTCGACGCCCACGGTTA 61.751 66.667 0.00 0.00 46.04 2.85
24 25 2.223377 GTCGTGTGAACAAACTCCATCC 59.777 50.000 0.00 0.00 0.00 3.51
47 48 0.543749 CTCCCCTTCATCTGGTCCAC 59.456 60.000 0.00 0.00 0.00 4.02
54 55 3.036429 GCGGTGCTCCCCTTCATCT 62.036 63.158 0.00 0.00 0.00 2.90
72 74 1.209128 GATGACGAAGCGGTACATGG 58.791 55.000 0.00 0.00 0.00 3.66
112 114 0.954452 GATCCCCAACATCCGCATTC 59.046 55.000 0.00 0.00 0.00 2.67
126 128 4.015872 TGAAGTGTGTGGTTTAGATCCC 57.984 45.455 0.00 0.00 0.00 3.85
134 136 2.387757 AGCCAAATGAAGTGTGTGGTT 58.612 42.857 0.00 0.00 0.00 3.67
239 241 9.844257 CCATTTCTCTAAGAAGTATTTCTGGAT 57.156 33.333 0.66 0.00 42.80 3.41
253 255 9.308000 ACATCTAGATACCTCCATTTCTCTAAG 57.692 37.037 4.54 0.00 0.00 2.18
318 320 4.080356 CCCTCCATTCTGAAATACTGGTCA 60.080 45.833 7.44 0.00 0.00 4.02
322 324 5.365021 ACTCCCTCCATTCTGAAATACTG 57.635 43.478 0.00 0.00 0.00 2.74
335 337 5.576563 TTTCTTGTGAAATACTCCCTCCA 57.423 39.130 0.00 0.00 37.27 3.86
367 369 0.378962 TGTGTTAACTTGCACACGGC 59.621 50.000 7.22 0.00 45.37 5.68
388 390 2.033236 TGCGAGATCGTTTTGTCACAAC 60.033 45.455 3.94 0.00 42.22 3.32
452 494 8.858003 ATCAGTCACGTACTTAATAGATTGTG 57.142 34.615 0.00 0.00 35.76 3.33
453 495 9.871238 AAATCAGTCACGTACTTAATAGATTGT 57.129 29.630 0.00 0.00 35.76 2.71
456 498 9.314321 CCAAAATCAGTCACGTACTTAATAGAT 57.686 33.333 0.00 0.00 35.76 1.98
457 499 7.277098 GCCAAAATCAGTCACGTACTTAATAGA 59.723 37.037 0.00 0.00 35.76 1.98
458 500 7.399523 GCCAAAATCAGTCACGTACTTAATAG 58.600 38.462 0.00 0.00 35.76 1.73
459 501 6.314400 GGCCAAAATCAGTCACGTACTTAATA 59.686 38.462 0.00 0.00 35.76 0.98
460 502 5.123344 GGCCAAAATCAGTCACGTACTTAAT 59.877 40.000 0.00 0.00 35.76 1.40
461 503 4.453136 GGCCAAAATCAGTCACGTACTTAA 59.547 41.667 0.00 0.00 35.76 1.85
462 504 3.998341 GGCCAAAATCAGTCACGTACTTA 59.002 43.478 0.00 0.00 35.76 2.24
463 505 2.812011 GGCCAAAATCAGTCACGTACTT 59.188 45.455 0.00 0.00 35.76 2.24
464 506 2.224426 TGGCCAAAATCAGTCACGTACT 60.224 45.455 0.61 0.00 39.81 2.73
465 507 2.095919 GTGGCCAAAATCAGTCACGTAC 60.096 50.000 7.24 0.00 0.00 3.67
466 508 2.147958 GTGGCCAAAATCAGTCACGTA 58.852 47.619 7.24 0.00 0.00 3.57
467 509 0.951558 GTGGCCAAAATCAGTCACGT 59.048 50.000 7.24 0.00 0.00 4.49
468 510 0.950836 TGTGGCCAAAATCAGTCACG 59.049 50.000 7.24 0.00 0.00 4.35
469 511 3.665745 AATGTGGCCAAAATCAGTCAC 57.334 42.857 7.24 0.00 0.00 3.67
470 512 4.502950 GGAAAATGTGGCCAAAATCAGTCA 60.503 41.667 7.24 0.00 0.00 3.41
471 513 3.996363 GGAAAATGTGGCCAAAATCAGTC 59.004 43.478 7.24 3.12 0.00 3.51
472 514 3.244526 GGGAAAATGTGGCCAAAATCAGT 60.245 43.478 7.24 0.00 0.00 3.41
473 515 3.244491 TGGGAAAATGTGGCCAAAATCAG 60.244 43.478 7.24 0.00 0.00 2.90
474 516 2.707791 TGGGAAAATGTGGCCAAAATCA 59.292 40.909 7.24 0.08 0.00 2.57
475 517 3.415457 TGGGAAAATGTGGCCAAAATC 57.585 42.857 7.24 2.13 0.00 2.17
476 518 3.872459 TTGGGAAAATGTGGCCAAAAT 57.128 38.095 7.24 0.45 0.00 1.82
477 519 3.652057 TTTGGGAAAATGTGGCCAAAA 57.348 38.095 7.24 0.00 0.00 2.44
478 520 3.872459 ATTTGGGAAAATGTGGCCAAA 57.128 38.095 7.24 0.15 0.00 3.28
479 521 3.872459 AATTTGGGAAAATGTGGCCAA 57.128 38.095 7.24 0.00 0.00 4.52
480 522 3.484407 CAAATTTGGGAAAATGTGGCCA 58.516 40.909 10.49 0.00 0.00 5.36
481 523 2.228582 GCAAATTTGGGAAAATGTGGCC 59.771 45.455 19.47 0.00 29.99 5.36
482 524 2.095819 CGCAAATTTGGGAAAATGTGGC 60.096 45.455 26.35 4.25 43.04 5.01
483 525 3.397482 TCGCAAATTTGGGAAAATGTGG 58.603 40.909 29.41 0.00 45.48 4.17
491 533 4.075682 TGTGAATACTCGCAAATTTGGGA 58.924 39.130 29.41 29.41 46.14 4.37
502 544 1.138859 TGCCAGGGATGTGAATACTCG 59.861 52.381 0.00 0.00 0.00 4.18
578 647 7.009357 CGGTTTAGTAGAGATCTTCCTTTTTCG 59.991 40.741 0.00 0.00 0.00 3.46
589 658 6.535508 AGAACATTTGCGGTTTAGTAGAGATC 59.464 38.462 0.00 0.00 0.00 2.75
603 672 5.163864 TGCAGATAAGTACAGAACATTTGCG 60.164 40.000 0.00 0.00 29.18 4.85
671 741 5.050091 GTGATAGGATTGCAGGTTTATCACG 60.050 44.000 18.92 0.00 38.19 4.35
724 794 6.033725 GCGTCGTGTTTTTCTTTCCTTTTTAA 59.966 34.615 0.00 0.00 0.00 1.52
725 795 5.512434 GCGTCGTGTTTTTCTTTCCTTTTTA 59.488 36.000 0.00 0.00 0.00 1.52
733 809 1.332686 GGGAGCGTCGTGTTTTTCTTT 59.667 47.619 0.00 0.00 0.00 2.52
736 812 0.872388 ATGGGAGCGTCGTGTTTTTC 59.128 50.000 0.00 0.00 0.00 2.29
839 917 4.408276 CCTCGGGTCATCTTATAGGAGAA 58.592 47.826 0.00 0.00 0.00 2.87
900 978 1.842920 TTGCTGGGTCTCTCTGGCA 60.843 57.895 0.00 0.00 0.00 4.92
923 1001 3.393472 GCTATGGCCTCTCTGGTTG 57.607 57.895 3.32 0.00 38.35 3.77
934 1012 1.176527 TGCAAGAACTTGGCTATGGC 58.823 50.000 14.95 0.00 40.74 4.40
935 1013 3.084039 TCTTGCAAGAACTTGGCTATGG 58.916 45.455 26.61 0.00 40.74 2.74
937 1015 4.260170 CTCTCTTGCAAGAACTTGGCTAT 58.740 43.478 28.16 0.00 40.74 2.97
938 1016 3.557898 CCTCTCTTGCAAGAACTTGGCTA 60.558 47.826 28.16 4.65 40.74 3.93
939 1017 2.502295 CTCTCTTGCAAGAACTTGGCT 58.498 47.619 28.16 0.00 40.74 4.75
940 1018 1.538950 CCTCTCTTGCAAGAACTTGGC 59.461 52.381 28.16 8.69 40.74 4.52
941 1019 3.131709 TCCTCTCTTGCAAGAACTTGG 57.868 47.619 28.16 23.96 40.74 3.61
990 1068 1.140652 CTTCTTCCCATCTCTGCCTCC 59.859 57.143 0.00 0.00 0.00 4.30
994 1078 3.902881 TCTTCTTCTTCCCATCTCTGC 57.097 47.619 0.00 0.00 0.00 4.26
1023 1107 3.670637 GATCACCAGCAGCGGCAGA 62.671 63.158 12.44 3.70 44.61 4.26
1035 1122 0.598680 CGAGGATGCCGAAGATCACC 60.599 60.000 0.00 0.00 0.00 4.02
1036 1123 1.218230 GCGAGGATGCCGAAGATCAC 61.218 60.000 0.00 0.00 0.00 3.06
1037 1124 1.068083 GCGAGGATGCCGAAGATCA 59.932 57.895 0.00 0.00 0.00 2.92
1048 1135 3.210528 GAGGACGACGGCGAGGAT 61.211 66.667 22.49 0.00 41.64 3.24
1167 1256 2.009774 CGTTAGGATGCAACCAGAAGG 58.990 52.381 16.21 10.28 42.21 3.46
1197 1286 4.662961 TGCCACACTGCTCCGTCG 62.663 66.667 0.00 0.00 0.00 5.12
1204 1293 1.747709 AATCTCATCTGCCACACTGC 58.252 50.000 0.00 0.00 0.00 4.40
1205 1294 5.121105 TGATTAATCTCATCTGCCACACTG 58.879 41.667 16.24 0.00 0.00 3.66
1218 1307 5.091431 GCACAACACAAGCTGATTAATCTC 58.909 41.667 16.24 8.29 0.00 2.75
1219 1308 4.378770 CGCACAACACAAGCTGATTAATCT 60.379 41.667 16.24 0.00 0.00 2.40
1220 1309 3.848019 CGCACAACACAAGCTGATTAATC 59.152 43.478 8.60 8.60 0.00 1.75
1221 1310 3.253188 ACGCACAACACAAGCTGATTAAT 59.747 39.130 0.00 0.00 0.00 1.40
1222 1311 2.616376 ACGCACAACACAAGCTGATTAA 59.384 40.909 0.00 0.00 0.00 1.40
1224 1313 1.024271 ACGCACAACACAAGCTGATT 58.976 45.000 0.00 0.00 0.00 2.57
1225 1314 0.308684 CACGCACAACACAAGCTGAT 59.691 50.000 0.00 0.00 0.00 2.90
1227 1316 0.589729 GTCACGCACAACACAAGCTG 60.590 55.000 0.00 0.00 0.00 4.24
1229 1318 0.934496 TAGTCACGCACAACACAAGC 59.066 50.000 0.00 0.00 0.00 4.01
1232 1321 2.289274 CCAATTAGTCACGCACAACACA 59.711 45.455 0.00 0.00 0.00 3.72
1233 1322 2.350388 CCCAATTAGTCACGCACAACAC 60.350 50.000 0.00 0.00 0.00 3.32
1234 1323 1.876799 CCCAATTAGTCACGCACAACA 59.123 47.619 0.00 0.00 0.00 3.33
1235 1324 1.199097 CCCCAATTAGTCACGCACAAC 59.801 52.381 0.00 0.00 0.00 3.32
1236 1325 1.072489 TCCCCAATTAGTCACGCACAA 59.928 47.619 0.00 0.00 0.00 3.33
1237 1326 0.687920 TCCCCAATTAGTCACGCACA 59.312 50.000 0.00 0.00 0.00 4.57
1238 1327 1.670811 CATCCCCAATTAGTCACGCAC 59.329 52.381 0.00 0.00 0.00 5.34
1239 1328 1.557371 TCATCCCCAATTAGTCACGCA 59.443 47.619 0.00 0.00 0.00 5.24
1240 1329 2.325583 TCATCCCCAATTAGTCACGC 57.674 50.000 0.00 0.00 0.00 5.34
1272 1363 3.365265 CCTCCGTGCCCTGCAAAC 61.365 66.667 0.00 0.00 41.47 2.93
1641 1735 4.478371 TGGCTGGCTGGCATCTCG 62.478 66.667 16.53 0.00 46.76 4.04
1668 1763 2.343246 GCCGCGCCTAATTAACAAAAAC 59.657 45.455 0.00 0.00 0.00 2.43
1671 1766 1.455248 AGCCGCGCCTAATTAACAAA 58.545 45.000 0.00 0.00 0.00 2.83
1802 1937 6.151985 ACAACTCTGTCTCGAGAGATAAACAT 59.848 38.462 17.22 0.00 41.95 2.71
1900 2035 3.349006 GTGGTGTGCTGCGTCAGG 61.349 66.667 8.57 0.00 31.21 3.86
1926 2066 1.519455 GCGTCCAGGTTCATCCTCG 60.519 63.158 0.00 0.00 46.24 4.63
2037 2177 3.046390 CTCTCGAAATGCGGATCACTAC 58.954 50.000 0.00 0.00 41.33 2.73
2097 2237 3.403057 CGGCGTCGTGACTGGTTG 61.403 66.667 0.00 0.00 0.00 3.77
2098 2238 4.657824 CCGGCGTCGTGACTGGTT 62.658 66.667 9.28 0.00 33.95 3.67
2101 2241 3.851845 TTTCCCGGCGTCGTGACTG 62.852 63.158 9.28 0.00 33.95 3.51
2102 2242 3.569049 CTTTCCCGGCGTCGTGACT 62.569 63.158 9.28 0.00 33.95 3.41
2103 2243 3.110178 CTTTCCCGGCGTCGTGAC 61.110 66.667 9.28 0.00 33.95 3.67
2135 2293 2.628178 CGGTCATAGCATACCTTCCTGA 59.372 50.000 0.00 0.00 33.34 3.86
2147 2305 0.250467 ATGTCCCATGCGGTCATAGC 60.250 55.000 9.88 0.00 38.46 2.97
2149 2307 0.836606 ACATGTCCCATGCGGTCATA 59.163 50.000 10.80 0.00 38.20 2.15
2153 2311 2.045045 CCACATGTCCCATGCGGT 60.045 61.111 0.00 0.00 0.00 5.68
2154 2312 0.393673 TAACCACATGTCCCATGCGG 60.394 55.000 9.19 9.19 0.00 5.69
2155 2313 1.016627 CTAACCACATGTCCCATGCG 58.983 55.000 0.00 0.00 0.00 4.73
2156 2314 0.740737 GCTAACCACATGTCCCATGC 59.259 55.000 0.00 0.00 0.00 4.06
2157 2315 2.127271 TGCTAACCACATGTCCCATG 57.873 50.000 0.00 2.77 0.00 3.66
2158 2316 2.897271 TTGCTAACCACATGTCCCAT 57.103 45.000 0.00 0.00 0.00 4.00
2159 2317 2.666272 TTTGCTAACCACATGTCCCA 57.334 45.000 0.00 0.00 0.00 4.37
2160 2318 3.509575 TGATTTTGCTAACCACATGTCCC 59.490 43.478 0.00 0.00 0.00 4.46
2161 2319 4.782019 TGATTTTGCTAACCACATGTCC 57.218 40.909 0.00 0.00 0.00 4.02
2162 2320 7.656707 ATTTTGATTTTGCTAACCACATGTC 57.343 32.000 0.00 0.00 0.00 3.06
2163 2321 7.714377 TGAATTTTGATTTTGCTAACCACATGT 59.286 29.630 0.00 0.00 0.00 3.21
2164 2322 8.085720 TGAATTTTGATTTTGCTAACCACATG 57.914 30.769 0.00 0.00 0.00 3.21
2165 2323 8.851541 ATGAATTTTGATTTTGCTAACCACAT 57.148 26.923 0.00 0.00 0.00 3.21
2166 2324 9.941325 ATATGAATTTTGATTTTGCTAACCACA 57.059 25.926 0.00 0.00 0.00 4.17
2174 2332 9.822185 ACCTTCCTATATGAATTTTGATTTTGC 57.178 29.630 0.00 0.00 0.00 3.68
2183 2341 9.911788 CCATAGCATACCTTCCTATATGAATTT 57.088 33.333 0.00 0.00 31.54 1.82
2184 2342 9.284131 TCCATAGCATACCTTCCTATATGAATT 57.716 33.333 0.00 0.00 31.54 2.17
2185 2343 8.860517 TCCATAGCATACCTTCCTATATGAAT 57.139 34.615 0.00 0.00 31.54 2.57
2186 2344 8.708378 CATCCATAGCATACCTTCCTATATGAA 58.292 37.037 0.00 0.00 31.54 2.57
2187 2345 7.202038 GCATCCATAGCATACCTTCCTATATGA 60.202 40.741 0.00 0.00 31.54 2.15
2188 2346 6.933521 GCATCCATAGCATACCTTCCTATATG 59.066 42.308 0.00 0.00 32.83 1.78
2189 2347 6.616959 TGCATCCATAGCATACCTTCCTATAT 59.383 38.462 0.00 0.00 37.02 0.86
2190 2348 5.963865 TGCATCCATAGCATACCTTCCTATA 59.036 40.000 0.00 0.00 37.02 1.31
2191 2349 4.784838 TGCATCCATAGCATACCTTCCTAT 59.215 41.667 0.00 0.00 37.02 2.57
2192 2350 4.167319 TGCATCCATAGCATACCTTCCTA 58.833 43.478 0.00 0.00 37.02 2.94
2193 2351 2.981784 TGCATCCATAGCATACCTTCCT 59.018 45.455 0.00 0.00 37.02 3.36
2194 2352 3.423539 TGCATCCATAGCATACCTTCC 57.576 47.619 0.00 0.00 37.02 3.46
2203 2361 4.070716 ACTGAGCTAAATGCATCCATAGC 58.929 43.478 22.12 22.12 45.94 2.97
2204 2362 4.694509 GGACTGAGCTAAATGCATCCATAG 59.305 45.833 0.00 4.76 45.94 2.23
2205 2363 4.505566 GGGACTGAGCTAAATGCATCCATA 60.506 45.833 0.00 0.00 45.94 2.74
2206 2364 3.484407 GGACTGAGCTAAATGCATCCAT 58.516 45.455 0.00 0.00 45.94 3.41
2207 2365 2.421952 GGGACTGAGCTAAATGCATCCA 60.422 50.000 0.00 0.00 45.94 3.41
2208 2366 2.225467 GGGACTGAGCTAAATGCATCC 58.775 52.381 0.00 0.00 45.94 3.51
2209 2367 1.869767 CGGGACTGAGCTAAATGCATC 59.130 52.381 0.00 0.00 45.94 3.91
2210 2368 1.959042 CGGGACTGAGCTAAATGCAT 58.041 50.000 0.00 0.00 45.94 3.96
2211 2369 0.744414 GCGGGACTGAGCTAAATGCA 60.744 55.000 0.00 0.00 45.94 3.96
2212 2370 1.766143 CGCGGGACTGAGCTAAATGC 61.766 60.000 0.00 0.00 43.29 3.56
2213 2371 1.766143 GCGCGGGACTGAGCTAAATG 61.766 60.000 8.83 0.00 0.00 2.32
2214 2372 1.521681 GCGCGGGACTGAGCTAAAT 60.522 57.895 8.83 0.00 0.00 1.40
2215 2373 2.125673 GCGCGGGACTGAGCTAAA 60.126 61.111 8.83 0.00 0.00 1.85
2216 2374 3.068691 AGCGCGGGACTGAGCTAA 61.069 61.111 8.83 0.00 43.44 3.09
2217 2375 3.826754 CAGCGCGGGACTGAGCTA 61.827 66.667 8.83 0.00 43.41 3.32
2220 2378 3.997064 CTTCCAGCGCGGGACTGAG 62.997 68.421 29.49 19.67 36.46 3.35
2221 2379 4.069232 CTTCCAGCGCGGGACTGA 62.069 66.667 29.49 14.00 36.46 3.41
2222 2380 3.589654 TTCTTCCAGCGCGGGACTG 62.590 63.158 29.49 22.89 36.46 3.51
2223 2381 2.185310 ATTTCTTCCAGCGCGGGACT 62.185 55.000 29.49 8.71 36.46 3.85
2224 2382 1.305930 AATTTCTTCCAGCGCGGGAC 61.306 55.000 29.49 0.00 36.46 4.46
2225 2383 1.002624 AATTTCTTCCAGCGCGGGA 60.003 52.632 26.07 26.07 34.36 5.14
2226 2384 1.137404 CAATTTCTTCCAGCGCGGG 59.863 57.895 21.57 21.57 34.36 6.13
2227 2385 0.734889 ATCAATTTCTTCCAGCGCGG 59.265 50.000 8.83 11.37 0.00 6.46
2228 2386 1.268234 GGATCAATTTCTTCCAGCGCG 60.268 52.381 0.00 0.00 0.00 6.86
2229 2387 1.268234 CGGATCAATTTCTTCCAGCGC 60.268 52.381 0.00 0.00 0.00 5.92
2230 2388 2.009774 ACGGATCAATTTCTTCCAGCG 58.990 47.619 0.00 0.00 0.00 5.18
2231 2389 4.440839 AAACGGATCAATTTCTTCCAGC 57.559 40.909 0.00 0.00 0.00 4.85
2232 2390 8.028938 ACAATTAAACGGATCAATTTCTTCCAG 58.971 33.333 0.00 0.00 0.00 3.86
2233 2391 7.812191 CACAATTAAACGGATCAATTTCTTCCA 59.188 33.333 0.00 0.00 0.00 3.53
2234 2392 8.026607 TCACAATTAAACGGATCAATTTCTTCC 58.973 33.333 0.00 0.00 0.00 3.46
2235 2393 8.964420 TCACAATTAAACGGATCAATTTCTTC 57.036 30.769 0.00 0.00 0.00 2.87
2236 2394 8.576442 ACTCACAATTAAACGGATCAATTTCTT 58.424 29.630 0.00 0.00 0.00 2.52
2237 2395 8.110860 ACTCACAATTAAACGGATCAATTTCT 57.889 30.769 0.00 0.00 0.00 2.52
2238 2396 7.216317 CGACTCACAATTAAACGGATCAATTTC 59.784 37.037 0.00 0.00 0.00 2.17
2239 2397 7.021196 CGACTCACAATTAAACGGATCAATTT 58.979 34.615 0.00 0.00 0.00 1.82
2240 2398 6.542852 CGACTCACAATTAAACGGATCAATT 58.457 36.000 0.00 0.00 0.00 2.32
2241 2399 5.447279 GCGACTCACAATTAAACGGATCAAT 60.447 40.000 0.00 0.00 0.00 2.57
2242 2400 4.142988 GCGACTCACAATTAAACGGATCAA 60.143 41.667 0.00 0.00 0.00 2.57
2243 2401 3.369756 GCGACTCACAATTAAACGGATCA 59.630 43.478 0.00 0.00 0.00 2.92
2244 2402 3.541516 CGCGACTCACAATTAAACGGATC 60.542 47.826 0.00 0.00 0.00 3.36
2245 2403 2.347452 CGCGACTCACAATTAAACGGAT 59.653 45.455 0.00 0.00 0.00 4.18
2246 2404 1.722464 CGCGACTCACAATTAAACGGA 59.278 47.619 0.00 0.00 0.00 4.69
2247 2405 1.458064 ACGCGACTCACAATTAAACGG 59.542 47.619 15.93 0.00 0.00 4.44
2248 2406 2.154198 TGACGCGACTCACAATTAAACG 59.846 45.455 15.93 0.00 0.00 3.60
2249 2407 3.060138 TGTGACGCGACTCACAATTAAAC 60.060 43.478 24.92 5.88 46.04 2.01
2250 2408 3.124560 TGTGACGCGACTCACAATTAAA 58.875 40.909 24.92 5.81 46.04 1.52
2251 2409 2.745102 TGTGACGCGACTCACAATTAA 58.255 42.857 24.92 6.44 46.04 1.40
2252 2410 2.425578 TGTGACGCGACTCACAATTA 57.574 45.000 24.92 6.77 46.04 1.40
2253 2411 3.282557 TGTGACGCGACTCACAATT 57.717 47.368 24.92 0.00 46.04 2.32
2257 2415 1.201825 GCTTTGTGACGCGACTCAC 59.798 57.895 19.65 19.65 40.98 3.51
2258 2416 1.067416 AGCTTTGTGACGCGACTCA 59.933 52.632 15.93 11.86 0.00 3.41
2259 2417 1.488957 CAGCTTTGTGACGCGACTC 59.511 57.895 15.93 8.70 0.00 3.36
2260 2418 1.956170 CCAGCTTTGTGACGCGACT 60.956 57.895 15.93 0.00 0.00 4.18
2261 2419 2.551270 CCAGCTTTGTGACGCGAC 59.449 61.111 15.93 7.62 0.00 5.19
2262 2420 3.345808 GCCAGCTTTGTGACGCGA 61.346 61.111 15.93 0.00 0.00 5.87
2263 2421 2.969806 ATGCCAGCTTTGTGACGCG 61.970 57.895 3.53 3.53 0.00 6.01
2264 2422 1.443194 CATGCCAGCTTTGTGACGC 60.443 57.895 0.00 0.00 0.00 5.19
2265 2423 0.110056 GTCATGCCAGCTTTGTGACG 60.110 55.000 0.00 0.00 31.15 4.35
2266 2424 0.110056 CGTCATGCCAGCTTTGTGAC 60.110 55.000 7.77 7.77 36.67 3.67
2267 2425 0.250252 TCGTCATGCCAGCTTTGTGA 60.250 50.000 0.00 0.00 0.00 3.58
2268 2426 0.592637 TTCGTCATGCCAGCTTTGTG 59.407 50.000 0.00 0.00 0.00 3.33
2269 2427 0.593128 GTTCGTCATGCCAGCTTTGT 59.407 50.000 0.00 0.00 0.00 2.83
2270 2428 0.109597 GGTTCGTCATGCCAGCTTTG 60.110 55.000 0.00 0.00 0.00 2.77
2271 2429 0.250901 AGGTTCGTCATGCCAGCTTT 60.251 50.000 0.00 0.00 0.00 3.51
2272 2430 0.250901 AAGGTTCGTCATGCCAGCTT 60.251 50.000 0.00 0.00 0.00 3.74
2273 2431 0.613260 TAAGGTTCGTCATGCCAGCT 59.387 50.000 0.00 0.00 0.00 4.24
2274 2432 1.448985 TTAAGGTTCGTCATGCCAGC 58.551 50.000 0.00 0.00 0.00 4.85
2275 2433 2.159517 GCTTTAAGGTTCGTCATGCCAG 60.160 50.000 0.00 0.00 0.00 4.85
2276 2434 1.810151 GCTTTAAGGTTCGTCATGCCA 59.190 47.619 0.00 0.00 0.00 4.92
2277 2435 1.810151 TGCTTTAAGGTTCGTCATGCC 59.190 47.619 0.00 0.00 0.00 4.40
2278 2436 2.414161 GGTGCTTTAAGGTTCGTCATGC 60.414 50.000 0.00 0.00 0.00 4.06
2279 2437 3.074412 AGGTGCTTTAAGGTTCGTCATG 58.926 45.455 0.00 0.00 0.00 3.07
2280 2438 3.418684 AGGTGCTTTAAGGTTCGTCAT 57.581 42.857 0.00 0.00 0.00 3.06
2281 2439 2.922740 AGGTGCTTTAAGGTTCGTCA 57.077 45.000 0.00 0.00 0.00 4.35
2282 2440 3.304458 CCAAAGGTGCTTTAAGGTTCGTC 60.304 47.826 0.00 0.00 31.96 4.20
2283 2441 2.621526 CCAAAGGTGCTTTAAGGTTCGT 59.378 45.455 0.00 0.00 31.96 3.85
2284 2442 2.030274 CCCAAAGGTGCTTTAAGGTTCG 60.030 50.000 0.00 0.00 31.96 3.95
2285 2443 3.660501 CCCAAAGGTGCTTTAAGGTTC 57.339 47.619 0.00 0.00 31.96 3.62
2298 2456 1.203001 TGCTAGACCCAAACCCAAAGG 60.203 52.381 0.00 0.00 40.04 3.11
2299 2457 2.162681 CTGCTAGACCCAAACCCAAAG 58.837 52.381 0.00 0.00 0.00 2.77
2300 2458 1.203001 CCTGCTAGACCCAAACCCAAA 60.203 52.381 0.00 0.00 0.00 3.28
2301 2459 0.404040 CCTGCTAGACCCAAACCCAA 59.596 55.000 0.00 0.00 0.00 4.12
2302 2460 1.497309 CCCTGCTAGACCCAAACCCA 61.497 60.000 0.00 0.00 0.00 4.51
2303 2461 1.303282 CCCTGCTAGACCCAAACCC 59.697 63.158 0.00 0.00 0.00 4.11
2304 2462 1.303282 CCCCTGCTAGACCCAAACC 59.697 63.158 0.00 0.00 0.00 3.27
2305 2463 1.303282 CCCCCTGCTAGACCCAAAC 59.697 63.158 0.00 0.00 0.00 2.93
2306 2464 2.612493 GCCCCCTGCTAGACCCAAA 61.612 63.158 0.00 0.00 36.87 3.28
2307 2465 3.015145 GCCCCCTGCTAGACCCAA 61.015 66.667 0.00 0.00 36.87 4.12
2310 2468 2.384653 GATTCGCCCCCTGCTAGACC 62.385 65.000 0.00 0.00 38.05 3.85
2311 2469 1.069935 GATTCGCCCCCTGCTAGAC 59.930 63.158 0.00 0.00 38.05 2.59
2312 2470 1.382557 TGATTCGCCCCCTGCTAGA 60.383 57.895 0.00 0.00 38.05 2.43
2313 2471 1.070445 CTGATTCGCCCCCTGCTAG 59.930 63.158 0.00 0.00 38.05 3.42
2314 2472 1.686325 GACTGATTCGCCCCCTGCTA 61.686 60.000 0.00 0.00 38.05 3.49
2315 2473 3.011517 ACTGATTCGCCCCCTGCT 61.012 61.111 0.00 0.00 38.05 4.24
2316 2474 2.514824 GACTGATTCGCCCCCTGC 60.515 66.667 0.00 0.00 0.00 4.85
2317 2475 2.202932 CGACTGATTCGCCCCCTG 60.203 66.667 0.00 0.00 41.87 4.45
2325 2483 3.814945 CCTGCAGAAAAACGACTGATTC 58.185 45.455 17.39 0.00 36.38 2.52
2326 2484 2.030805 GCCTGCAGAAAAACGACTGATT 60.031 45.455 17.39 0.00 36.38 2.57
2327 2485 1.537202 GCCTGCAGAAAAACGACTGAT 59.463 47.619 17.39 0.00 36.38 2.90
2328 2486 0.944386 GCCTGCAGAAAAACGACTGA 59.056 50.000 17.39 0.00 36.38 3.41
2329 2487 0.662619 TGCCTGCAGAAAAACGACTG 59.337 50.000 17.39 0.00 37.22 3.51
2330 2488 0.947244 CTGCCTGCAGAAAAACGACT 59.053 50.000 17.39 0.00 46.30 4.18
2331 2489 0.040067 CCTGCCTGCAGAAAAACGAC 60.040 55.000 20.29 0.00 46.30 4.34
2332 2490 1.795170 GCCTGCCTGCAGAAAAACGA 61.795 55.000 20.29 0.00 46.30 3.85
2333 2491 1.372128 GCCTGCCTGCAGAAAAACG 60.372 57.895 20.29 3.78 46.30 3.60
2334 2492 1.005748 GGCCTGCCTGCAGAAAAAC 60.006 57.895 20.29 1.04 46.30 2.43
2335 2493 2.209315 GGGCCTGCCTGCAGAAAAA 61.209 57.895 20.29 0.00 46.30 1.94
2336 2494 2.601367 GGGCCTGCCTGCAGAAAA 60.601 61.111 20.29 0.00 46.30 2.29
2351 2509 3.197790 CAGGTTGCATCGCTCGGG 61.198 66.667 0.00 0.00 0.00 5.14
2352 2510 2.125552 TCAGGTTGCATCGCTCGG 60.126 61.111 0.00 0.00 0.00 4.63
2353 2511 2.169789 CCTCAGGTTGCATCGCTCG 61.170 63.158 0.00 0.00 0.00 5.03
2354 2512 2.467826 GCCTCAGGTTGCATCGCTC 61.468 63.158 0.00 0.00 0.00 5.03
2355 2513 2.437359 GCCTCAGGTTGCATCGCT 60.437 61.111 0.00 0.00 0.00 4.93
2356 2514 2.747460 TGCCTCAGGTTGCATCGC 60.747 61.111 0.00 0.00 31.31 4.58
2357 2515 2.743752 CGTGCCTCAGGTTGCATCG 61.744 63.158 0.00 0.00 40.07 3.84
2358 2516 1.672356 ACGTGCCTCAGGTTGCATC 60.672 57.895 0.00 0.00 40.07 3.91
2359 2517 1.968017 CACGTGCCTCAGGTTGCAT 60.968 57.895 0.82 0.00 40.07 3.96
2360 2518 2.591429 CACGTGCCTCAGGTTGCA 60.591 61.111 0.82 0.00 29.69 4.08
2361 2519 3.357079 CCACGTGCCTCAGGTTGC 61.357 66.667 10.91 0.00 29.69 4.17
2362 2520 2.669569 CCCACGTGCCTCAGGTTG 60.670 66.667 10.91 0.00 29.69 3.77
2363 2521 3.168528 ACCCACGTGCCTCAGGTT 61.169 61.111 10.91 0.00 29.69 3.50
2364 2522 3.941188 CACCCACGTGCCTCAGGT 61.941 66.667 10.91 8.95 32.04 4.00
2365 2523 3.941188 ACACCCACGTGCCTCAGG 61.941 66.667 10.91 8.22 44.40 3.86
2366 2524 2.666190 CACACCCACGTGCCTCAG 60.666 66.667 10.91 0.00 44.40 3.35
2367 2525 4.248842 CCACACCCACGTGCCTCA 62.249 66.667 10.91 0.00 44.40 3.86
2388 2546 4.012895 CACCTCCGCGTGTGCAAC 62.013 66.667 4.92 0.00 42.97 4.17
2392 2550 3.916392 GAGACCACCTCCGCGTGTG 62.916 68.421 4.92 9.51 35.87 3.82
2393 2551 3.681835 GAGACCACCTCCGCGTGT 61.682 66.667 4.92 0.00 35.87 4.49
2394 2552 3.220999 TTGAGACCACCTCCGCGTG 62.221 63.158 4.92 0.00 41.25 5.34
2395 2553 2.915659 TTGAGACCACCTCCGCGT 60.916 61.111 4.92 0.00 41.25 6.01
2396 2554 2.125912 CTTGAGACCACCTCCGCG 60.126 66.667 0.00 0.00 41.25 6.46
2397 2555 2.266055 CCTTGAGACCACCTCCGC 59.734 66.667 0.00 0.00 41.25 5.54
2398 2556 2.266055 GCCTTGAGACCACCTCCG 59.734 66.667 0.00 0.00 41.25 4.63
2399 2557 2.113243 AACGCCTTGAGACCACCTCC 62.113 60.000 0.00 0.00 41.25 4.30
2400 2558 0.951040 CAACGCCTTGAGACCACCTC 60.951 60.000 0.00 0.00 42.30 3.85
2401 2559 1.071471 CAACGCCTTGAGACCACCT 59.929 57.895 0.00 0.00 0.00 4.00
2402 2560 2.617274 GCAACGCCTTGAGACCACC 61.617 63.158 0.00 0.00 0.00 4.61
2403 2561 2.946762 GCAACGCCTTGAGACCAC 59.053 61.111 0.00 0.00 0.00 4.16
2404 2562 2.664851 CGCAACGCCTTGAGACCA 60.665 61.111 0.00 0.00 29.02 4.02
2405 2563 2.251642 AACGCAACGCCTTGAGACC 61.252 57.895 6.21 0.00 31.96 3.85
2406 2564 1.082756 CAACGCAACGCCTTGAGAC 60.083 57.895 6.21 0.00 31.96 3.36
2407 2565 1.092921 AACAACGCAACGCCTTGAGA 61.093 50.000 6.21 0.00 31.96 3.27
2408 2566 0.248458 AAACAACGCAACGCCTTGAG 60.248 50.000 0.00 0.00 33.64 3.02
2409 2567 0.248296 GAAACAACGCAACGCCTTGA 60.248 50.000 0.00 0.00 31.17 3.02
2410 2568 0.248458 AGAAACAACGCAACGCCTTG 60.248 50.000 0.00 0.00 32.48 3.61
2411 2569 0.454196 AAGAAACAACGCAACGCCTT 59.546 45.000 0.00 0.00 0.00 4.35
2412 2570 0.248458 CAAGAAACAACGCAACGCCT 60.248 50.000 0.00 0.00 0.00 5.52
2413 2571 0.248296 TCAAGAAACAACGCAACGCC 60.248 50.000 0.00 0.00 0.00 5.68
2414 2572 1.512771 CTTCAAGAAACAACGCAACGC 59.487 47.619 0.00 0.00 0.00 4.84
2415 2573 2.108700 CCTTCAAGAAACAACGCAACG 58.891 47.619 0.00 0.00 0.00 4.10
2416 2574 3.181500 ACTCCTTCAAGAAACAACGCAAC 60.181 43.478 0.00 0.00 0.00 4.17
2417 2575 3.013921 ACTCCTTCAAGAAACAACGCAA 58.986 40.909 0.00 0.00 0.00 4.85
2418 2576 2.639065 ACTCCTTCAAGAAACAACGCA 58.361 42.857 0.00 0.00 0.00 5.24
2419 2577 3.363178 CAACTCCTTCAAGAAACAACGC 58.637 45.455 0.00 0.00 0.00 4.84
2420 2578 3.243068 CCCAACTCCTTCAAGAAACAACG 60.243 47.826 0.00 0.00 0.00 4.10
2421 2579 3.068165 CCCCAACTCCTTCAAGAAACAAC 59.932 47.826 0.00 0.00 0.00 3.32
2422 2580 3.053245 TCCCCAACTCCTTCAAGAAACAA 60.053 43.478 0.00 0.00 0.00 2.83
2423 2581 2.512056 TCCCCAACTCCTTCAAGAAACA 59.488 45.455 0.00 0.00 0.00 2.83
2424 2582 3.223674 TCCCCAACTCCTTCAAGAAAC 57.776 47.619 0.00 0.00 0.00 2.78
2425 2583 3.140144 ACATCCCCAACTCCTTCAAGAAA 59.860 43.478 0.00 0.00 0.00 2.52
2426 2584 2.716424 ACATCCCCAACTCCTTCAAGAA 59.284 45.455 0.00 0.00 0.00 2.52
2427 2585 2.040278 CACATCCCCAACTCCTTCAAGA 59.960 50.000 0.00 0.00 0.00 3.02
2428 2586 2.440409 CACATCCCCAACTCCTTCAAG 58.560 52.381 0.00 0.00 0.00 3.02
2429 2587 1.075374 CCACATCCCCAACTCCTTCAA 59.925 52.381 0.00 0.00 0.00 2.69
2430 2588 0.698238 CCACATCCCCAACTCCTTCA 59.302 55.000 0.00 0.00 0.00 3.02
2431 2589 0.698818 ACCACATCCCCAACTCCTTC 59.301 55.000 0.00 0.00 0.00 3.46
2432 2590 1.075536 GAACCACATCCCCAACTCCTT 59.924 52.381 0.00 0.00 0.00 3.36
2433 2591 0.698818 GAACCACATCCCCAACTCCT 59.301 55.000 0.00 0.00 0.00 3.69
2434 2592 0.404040 TGAACCACATCCCCAACTCC 59.596 55.000 0.00 0.00 0.00 3.85
2435 2593 2.094675 CATGAACCACATCCCCAACTC 58.905 52.381 0.00 0.00 37.07 3.01
2436 2594 1.272648 CCATGAACCACATCCCCAACT 60.273 52.381 0.00 0.00 37.07 3.16
2437 2595 1.185315 CCATGAACCACATCCCCAAC 58.815 55.000 0.00 0.00 37.07 3.77
2438 2596 0.614415 GCCATGAACCACATCCCCAA 60.614 55.000 0.00 0.00 37.07 4.12
2439 2597 1.000233 GCCATGAACCACATCCCCA 60.000 57.895 0.00 0.00 37.07 4.96
2440 2598 2.120909 CGCCATGAACCACATCCCC 61.121 63.158 0.00 0.00 37.07 4.81
2441 2599 0.466189 ATCGCCATGAACCACATCCC 60.466 55.000 0.00 0.00 37.07 3.85
2442 2600 0.664761 CATCGCCATGAACCACATCC 59.335 55.000 0.00 0.00 37.07 3.51
2443 2601 0.664761 CCATCGCCATGAACCACATC 59.335 55.000 0.00 0.00 37.07 3.06
2444 2602 0.255604 TCCATCGCCATGAACCACAT 59.744 50.000 0.00 0.00 40.17 3.21
2445 2603 0.392863 CTCCATCGCCATGAACCACA 60.393 55.000 0.00 0.00 30.57 4.17
2446 2604 0.107703 TCTCCATCGCCATGAACCAC 60.108 55.000 0.00 0.00 30.57 4.16
2447 2605 0.178767 CTCTCCATCGCCATGAACCA 59.821 55.000 0.00 0.00 30.57 3.67
2448 2606 0.533755 CCTCTCCATCGCCATGAACC 60.534 60.000 0.00 0.00 30.57 3.62
2449 2607 0.179000 ACCTCTCCATCGCCATGAAC 59.821 55.000 0.00 0.00 30.57 3.18
2450 2608 0.178767 CACCTCTCCATCGCCATGAA 59.821 55.000 0.00 0.00 30.57 2.57
2451 2609 1.689243 CCACCTCTCCATCGCCATGA 61.689 60.000 0.00 0.00 30.57 3.07
2452 2610 1.227764 CCACCTCTCCATCGCCATG 60.228 63.158 0.00 0.00 0.00 3.66
2453 2611 1.690633 ACCACCTCTCCATCGCCAT 60.691 57.895 0.00 0.00 0.00 4.40
2454 2612 2.284625 ACCACCTCTCCATCGCCA 60.285 61.111 0.00 0.00 0.00 5.69
2455 2613 1.899437 TTCACCACCTCTCCATCGCC 61.899 60.000 0.00 0.00 0.00 5.54
2456 2614 0.036388 TTTCACCACCTCTCCATCGC 60.036 55.000 0.00 0.00 0.00 4.58
2457 2615 2.472695 TTTTCACCACCTCTCCATCG 57.527 50.000 0.00 0.00 0.00 3.84
2458 2616 4.006319 CTCTTTTTCACCACCTCTCCATC 58.994 47.826 0.00 0.00 0.00 3.51
2459 2617 3.652869 TCTCTTTTTCACCACCTCTCCAT 59.347 43.478 0.00 0.00 0.00 3.41
2460 2618 3.045634 TCTCTTTTTCACCACCTCTCCA 58.954 45.455 0.00 0.00 0.00 3.86
2461 2619 3.558109 CCTCTCTTTTTCACCACCTCTCC 60.558 52.174 0.00 0.00 0.00 3.71
2462 2620 3.071747 ACCTCTCTTTTTCACCACCTCTC 59.928 47.826 0.00 0.00 0.00 3.20
2463 2621 3.049344 ACCTCTCTTTTTCACCACCTCT 58.951 45.455 0.00 0.00 0.00 3.69
2464 2622 3.142174 CACCTCTCTTTTTCACCACCTC 58.858 50.000 0.00 0.00 0.00 3.85
2465 2623 2.158608 CCACCTCTCTTTTTCACCACCT 60.159 50.000 0.00 0.00 0.00 4.00
2466 2624 2.158667 TCCACCTCTCTTTTTCACCACC 60.159 50.000 0.00 0.00 0.00 4.61
2467 2625 3.208747 TCCACCTCTCTTTTTCACCAC 57.791 47.619 0.00 0.00 0.00 4.16
2468 2626 3.458118 TCTTCCACCTCTCTTTTTCACCA 59.542 43.478 0.00 0.00 0.00 4.17
2469 2627 4.086706 TCTTCCACCTCTCTTTTTCACC 57.913 45.455 0.00 0.00 0.00 4.02
2470 2628 5.308825 TCATCTTCCACCTCTCTTTTTCAC 58.691 41.667 0.00 0.00 0.00 3.18
2471 2629 5.072329 ACTCATCTTCCACCTCTCTTTTTCA 59.928 40.000 0.00 0.00 0.00 2.69
2472 2630 5.411053 CACTCATCTTCCACCTCTCTTTTTC 59.589 44.000 0.00 0.00 0.00 2.29
2473 2631 5.072329 TCACTCATCTTCCACCTCTCTTTTT 59.928 40.000 0.00 0.00 0.00 1.94
2474 2632 4.594920 TCACTCATCTTCCACCTCTCTTTT 59.405 41.667 0.00 0.00 0.00 2.27
2475 2633 4.020662 GTCACTCATCTTCCACCTCTCTTT 60.021 45.833 0.00 0.00 0.00 2.52
2476 2634 3.513515 GTCACTCATCTTCCACCTCTCTT 59.486 47.826 0.00 0.00 0.00 2.85
2477 2635 3.096092 GTCACTCATCTTCCACCTCTCT 58.904 50.000 0.00 0.00 0.00 3.10
2478 2636 2.828520 TGTCACTCATCTTCCACCTCTC 59.171 50.000 0.00 0.00 0.00 3.20
2479 2637 2.830923 CTGTCACTCATCTTCCACCTCT 59.169 50.000 0.00 0.00 0.00 3.69
2480 2638 2.564947 ACTGTCACTCATCTTCCACCTC 59.435 50.000 0.00 0.00 0.00 3.85
2481 2639 2.301296 CACTGTCACTCATCTTCCACCT 59.699 50.000 0.00 0.00 0.00 4.00
2482 2640 2.300152 TCACTGTCACTCATCTTCCACC 59.700 50.000 0.00 0.00 0.00 4.61
2483 2641 3.256879 TCTCACTGTCACTCATCTTCCAC 59.743 47.826 0.00 0.00 0.00 4.02
2484 2642 3.500343 TCTCACTGTCACTCATCTTCCA 58.500 45.455 0.00 0.00 0.00 3.53
2485 2643 3.761218 TCTCTCACTGTCACTCATCTTCC 59.239 47.826 0.00 0.00 0.00 3.46
2486 2644 4.217334 TGTCTCTCACTGTCACTCATCTTC 59.783 45.833 0.00 0.00 0.00 2.87
2487 2645 4.148079 TGTCTCTCACTGTCACTCATCTT 58.852 43.478 0.00 0.00 0.00 2.40
2488 2646 3.758023 CTGTCTCTCACTGTCACTCATCT 59.242 47.826 0.00 0.00 0.00 2.90
2489 2647 3.755905 TCTGTCTCTCACTGTCACTCATC 59.244 47.826 0.00 0.00 0.00 2.92
2490 2648 3.760738 TCTGTCTCTCACTGTCACTCAT 58.239 45.455 0.00 0.00 0.00 2.90
2491 2649 3.214696 TCTGTCTCTCACTGTCACTCA 57.785 47.619 0.00 0.00 0.00 3.41
2492 2650 4.335315 CCTATCTGTCTCTCACTGTCACTC 59.665 50.000 0.00 0.00 0.00 3.51
2493 2651 4.018870 TCCTATCTGTCTCTCACTGTCACT 60.019 45.833 0.00 0.00 0.00 3.41
2494 2652 4.265893 TCCTATCTGTCTCTCACTGTCAC 58.734 47.826 0.00 0.00 0.00 3.67
2495 2653 4.576330 TCCTATCTGTCTCTCACTGTCA 57.424 45.455 0.00 0.00 0.00 3.58
2496 2654 6.096141 TCAAATCCTATCTGTCTCTCACTGTC 59.904 42.308 0.00 0.00 0.00 3.51
2497 2655 5.954752 TCAAATCCTATCTGTCTCTCACTGT 59.045 40.000 0.00 0.00 0.00 3.55
2498 2656 6.096705 ACTCAAATCCTATCTGTCTCTCACTG 59.903 42.308 0.00 0.00 0.00 3.66
2499 2657 6.096705 CACTCAAATCCTATCTGTCTCTCACT 59.903 42.308 0.00 0.00 0.00 3.41
2500 2658 6.127479 ACACTCAAATCCTATCTGTCTCTCAC 60.127 42.308 0.00 0.00 0.00 3.51
2501 2659 5.954752 ACACTCAAATCCTATCTGTCTCTCA 59.045 40.000 0.00 0.00 0.00 3.27
2502 2660 6.272318 CACACTCAAATCCTATCTGTCTCTC 58.728 44.000 0.00 0.00 0.00 3.20
2503 2661 5.128499 CCACACTCAAATCCTATCTGTCTCT 59.872 44.000 0.00 0.00 0.00 3.10
2504 2662 5.105146 ACCACACTCAAATCCTATCTGTCTC 60.105 44.000 0.00 0.00 0.00 3.36
2505 2663 4.780021 ACCACACTCAAATCCTATCTGTCT 59.220 41.667 0.00 0.00 0.00 3.41
2506 2664 4.872691 CACCACACTCAAATCCTATCTGTC 59.127 45.833 0.00 0.00 0.00 3.51
2507 2665 4.323792 CCACCACACTCAAATCCTATCTGT 60.324 45.833 0.00 0.00 0.00 3.41
2508 2666 4.194640 CCACCACACTCAAATCCTATCTG 58.805 47.826 0.00 0.00 0.00 2.90
2509 2667 3.846588 ACCACCACACTCAAATCCTATCT 59.153 43.478 0.00 0.00 0.00 1.98
2510 2668 3.941483 CACCACCACACTCAAATCCTATC 59.059 47.826 0.00 0.00 0.00 2.08
2511 2669 3.308402 CCACCACCACACTCAAATCCTAT 60.308 47.826 0.00 0.00 0.00 2.57
2512 2670 2.039746 CCACCACCACACTCAAATCCTA 59.960 50.000 0.00 0.00 0.00 2.94
2513 2671 1.202927 CCACCACCACACTCAAATCCT 60.203 52.381 0.00 0.00 0.00 3.24
2514 2672 1.247567 CCACCACCACACTCAAATCC 58.752 55.000 0.00 0.00 0.00 3.01
2515 2673 1.247567 CCCACCACCACACTCAAATC 58.752 55.000 0.00 0.00 0.00 2.17
2516 2674 0.555769 ACCCACCACCACACTCAAAT 59.444 50.000 0.00 0.00 0.00 2.32
2517 2675 1.214217 TACCCACCACCACACTCAAA 58.786 50.000 0.00 0.00 0.00 2.69
2518 2676 1.142060 CTTACCCACCACCACACTCAA 59.858 52.381 0.00 0.00 0.00 3.02
2519 2677 0.762418 CTTACCCACCACCACACTCA 59.238 55.000 0.00 0.00 0.00 3.41
2520 2678 0.763035 ACTTACCCACCACCACACTC 59.237 55.000 0.00 0.00 0.00 3.51
2521 2679 1.975680 CTACTTACCCACCACCACACT 59.024 52.381 0.00 0.00 0.00 3.55
2522 2680 1.002773 CCTACTTACCCACCACCACAC 59.997 57.143 0.00 0.00 0.00 3.82
2523 2681 1.354101 CCTACTTACCCACCACCACA 58.646 55.000 0.00 0.00 0.00 4.17
2524 2682 0.616891 CCCTACTTACCCACCACCAC 59.383 60.000 0.00 0.00 0.00 4.16
2525 2683 0.194080 ACCCTACTTACCCACCACCA 59.806 55.000 0.00 0.00 0.00 4.17
2526 2684 0.616891 CACCCTACTTACCCACCACC 59.383 60.000 0.00 0.00 0.00 4.61
2527 2685 0.616891 CCACCCTACTTACCCACCAC 59.383 60.000 0.00 0.00 0.00 4.16
2528 2686 0.492730 TCCACCCTACTTACCCACCA 59.507 55.000 0.00 0.00 0.00 4.17
2529 2687 1.889174 ATCCACCCTACTTACCCACC 58.111 55.000 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.