Multiple sequence alignment - TraesCS5D01G495800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G495800 chr5D 100.000 5310 0 0 1 5310 526878140 526883449 0.000000e+00 9806.0
1 TraesCS5D01G495800 chr5D 89.055 201 19 3 1625 1822 348748458 348748658 4.110000e-61 246.0
2 TraesCS5D01G495800 chr5D 90.000 180 17 1 1642 1820 96030978 96031157 1.150000e-56 231.0
3 TraesCS5D01G495800 chr5D 94.340 53 3 0 1336 1388 262660564 262660616 1.230000e-11 82.4
4 TraesCS5D01G495800 chr5B 94.731 2581 97 19 1830 4401 662960911 662963461 0.000000e+00 3976.0
5 TraesCS5D01G495800 chr5B 91.488 1257 76 14 14 1248 662959328 662960575 0.000000e+00 1700.0
6 TraesCS5D01G495800 chr5B 82.524 412 56 9 4559 4956 662963910 662964319 1.090000e-91 348.0
7 TraesCS5D01G495800 chr5B 84.825 257 24 10 5054 5307 662964679 662964923 1.480000e-60 244.0
8 TraesCS5D01G495800 chr5B 88.636 132 12 3 1387 1515 662960570 662960701 1.980000e-34 158.0
9 TraesCS5D01G495800 chr5B 94.643 56 3 0 1336 1391 14166835 14166890 2.630000e-13 87.9
10 TraesCS5D01G495800 chr5A 93.288 2667 131 27 2004 4641 654078969 654081616 0.000000e+00 3890.0
11 TraesCS5D01G495800 chr5A 89.958 956 75 15 244 1186 654077677 654078624 0.000000e+00 1214.0
12 TraesCS5D01G495800 chr5A 94.767 172 5 2 14 181 654077508 654077679 1.130000e-66 265.0
13 TraesCS5D01G495800 chr5A 88.000 200 19 4 1633 1828 101083265 101083463 1.150000e-56 231.0
14 TraesCS5D01G495800 chr5A 81.275 251 21 11 1393 1641 654078622 654078848 4.230000e-41 180.0
15 TraesCS5D01G495800 chr5A 100.000 28 0 0 4455 4482 587424829 587424856 1.000000e-02 52.8
16 TraesCS5D01G495800 chr2A 81.019 432 71 9 2746 3170 194130021 194129594 3.060000e-87 333.0
17 TraesCS5D01G495800 chr2B 81.190 420 68 9 2751 3163 236527275 236526860 1.430000e-85 327.0
18 TraesCS5D01G495800 chr2B 90.164 183 14 2 1640 1818 771215135 771215317 8.890000e-58 235.0
19 TraesCS5D01G495800 chr2B 96.429 56 2 0 1336 1391 664215213 664215268 5.660000e-15 93.5
20 TraesCS5D01G495800 chr2B 84.211 57 8 1 1304 1359 765223926 765223870 3.000000e-03 54.7
21 TraesCS5D01G495800 chr2D 80.796 427 71 9 2751 3170 179692156 179691734 1.840000e-84 324.0
22 TraesCS5D01G495800 chr2D 87.817 197 19 5 1634 1826 537187920 537187725 5.350000e-55 226.0
23 TraesCS5D01G495800 chr2D 83.133 83 11 2 4401 4483 477393235 477393156 7.380000e-09 73.1
24 TraesCS5D01G495800 chr7D 82.228 377 61 4 2751 3124 366451220 366451593 2.390000e-83 320.0
25 TraesCS5D01G495800 chr7D 81.633 98 6 3 1304 1389 538902002 538902099 2.650000e-08 71.3
26 TraesCS5D01G495800 chr1D 80.529 416 78 3 2751 3163 99830557 99830142 3.090000e-82 316.0
27 TraesCS5D01G495800 chr1D 88.710 186 19 2 1638 1821 375011912 375012097 5.350000e-55 226.0
28 TraesCS5D01G495800 chr1D 81.250 80 10 4 1304 1382 168283449 168283374 5.740000e-05 60.2
29 TraesCS5D01G495800 chr1A 80.336 417 79 3 2750 3163 95313235 95312819 3.990000e-81 313.0
30 TraesCS5D01G495800 chrUn 79.953 429 73 11 2750 3170 5436088 5435665 2.400000e-78 303.0
31 TraesCS5D01G495800 chr4D 88.038 209 17 7 1632 1834 35722492 35722286 1.910000e-59 241.0
32 TraesCS5D01G495800 chr4D 90.217 184 10 7 1643 1819 29656471 29656653 3.200000e-57 233.0
33 TraesCS5D01G495800 chr7B 89.189 185 17 3 1641 1822 606591084 606591268 1.490000e-55 228.0
34 TraesCS5D01G495800 chr7B 96.491 57 2 0 1336 1392 665395481 665395537 1.570000e-15 95.3
35 TraesCS5D01G495800 chr7B 88.406 69 7 1 1336 1404 524995735 524995668 1.230000e-11 82.4
36 TraesCS5D01G495800 chr6A 94.828 58 3 0 1336 1393 299315674 299315731 2.040000e-14 91.6
37 TraesCS5D01G495800 chr6A 85.227 88 10 2 1304 1388 495448837 495448750 2.630000e-13 87.9
38 TraesCS5D01G495800 chr6B 90.909 66 5 1 1336 1400 651412685 651412620 2.630000e-13 87.9
39 TraesCS5D01G495800 chr4A 84.091 88 9 3 1307 1389 700012644 700012557 4.410000e-11 80.5
40 TraesCS5D01G495800 chr4A 100.000 28 0 0 1304 1331 597535733 597535760 1.000000e-02 52.8
41 TraesCS5D01G495800 chr4B 92.000 50 3 1 4434 4483 557458906 557458858 9.540000e-08 69.4
42 TraesCS5D01G495800 chr3D 100.000 30 0 0 1303 1332 15334435 15334464 7.430000e-04 56.5
43 TraesCS5D01G495800 chr1B 100.000 29 0 0 1303 1331 62868710 62868738 3.000000e-03 54.7
44 TraesCS5D01G495800 chr7A 100.000 28 0 0 1304 1331 343600216 343600243 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G495800 chr5D 526878140 526883449 5309 False 9806.00 9806 100.0000 1 5310 1 chr5D.!!$F4 5309
1 TraesCS5D01G495800 chr5B 662959328 662964923 5595 False 1285.20 3976 88.4408 14 5307 5 chr5B.!!$F2 5293
2 TraesCS5D01G495800 chr5A 654077508 654081616 4108 False 1387.25 3890 89.8220 14 4641 4 chr5A.!!$F3 4627

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
246 254 0.326238 TTGTGGAGGCCTACCCCTAG 60.326 60.0 14.06 0.0 34.69 3.02 F
2096 2229 0.109086 GCGAGTCAGCACTGCTCTTA 60.109 55.0 0.00 0.0 36.40 2.10 F
2269 2402 0.468226 GGCTTCCGACCATGGATGTA 59.532 55.0 21.47 0.0 38.00 2.29 F
3682 3815 0.613777 ACCCGTTCACCTCCATCTTC 59.386 55.0 0.00 0.0 0.00 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2124 2257 0.448990 CATGGTCCACATTGCACGAG 59.551 55.0 0.00 0.00 37.84 4.18 R
3771 3904 0.109781 CACAAAGCCCATGTACGTGC 60.110 55.0 9.72 0.00 0.00 5.34 R
3964 4097 0.514691 GCTTGGACGTCAGCTTGAAG 59.485 55.0 18.91 9.55 32.10 3.02 R
5022 5513 0.108585 TGAGAATGGGCGGATTAGGC 59.891 55.0 0.00 0.00 0.00 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
178 186 7.611213 AACAAAGTAGACACAATATGTAGGC 57.389 36.000 0.00 0.00 43.56 3.93
214 222 9.355916 TCTCTTTATTATTCAGATCCGAAGAGA 57.644 33.333 7.63 7.63 42.28 3.10
233 241 9.476202 CGAAGAGAATATACATACAATTGTGGA 57.524 33.333 21.42 2.06 0.00 4.02
235 243 9.784531 AAGAGAATATACATACAATTGTGGAGG 57.215 33.333 21.42 6.41 0.00 4.30
240 248 3.886123 ACATACAATTGTGGAGGCCTAC 58.114 45.455 21.42 8.55 0.00 3.18
241 249 3.214328 CATACAATTGTGGAGGCCTACC 58.786 50.000 21.42 13.31 0.00 3.18
242 250 0.331616 ACAATTGTGGAGGCCTACCC 59.668 55.000 14.06 8.23 36.11 3.69
246 254 0.326238 TTGTGGAGGCCTACCCCTAG 60.326 60.000 14.06 0.00 34.69 3.02
251 259 1.007359 GGAGGCCTACCCCTAGATAGG 59.993 61.905 4.42 9.29 43.25 2.57
313 322 1.063266 TGGCAAAAGGGAAAGACCACT 60.063 47.619 0.00 0.00 41.20 4.00
342 351 1.281867 TCGATTTCCAGCAGACCCATT 59.718 47.619 0.00 0.00 0.00 3.16
427 441 7.066645 ACCATCACTAAGATCATTGATGTGTTG 59.933 37.037 17.54 10.34 42.52 3.33
431 445 7.118245 TCACTAAGATCATTGATGTGTTGTGTC 59.882 37.037 3.32 0.00 0.00 3.67
526 540 0.733150 GACCCGAAAGCCATACAAGC 59.267 55.000 0.00 0.00 0.00 4.01
607 621 1.468127 CGCCACTTATTGTGCATCACA 59.532 47.619 0.00 0.00 44.92 3.58
614 628 6.203647 CACTTATTGTGCATCACATATGTGG 58.796 40.000 30.56 18.96 44.16 4.17
617 631 2.642427 TGTGCATCACATATGTGGGTC 58.358 47.619 30.56 20.37 45.65 4.46
650 664 5.297278 ACAACGCTTTGTTTAGTATTGGACA 59.703 36.000 2.17 0.00 43.89 4.02
707 722 3.244630 ACCAAATTTAGTGCTCGGGTGTA 60.245 43.478 0.00 0.00 0.00 2.90
780 795 3.377172 GGTGTGCTGTGAACAAACTAAGT 59.623 43.478 0.00 0.00 0.00 2.24
825 840 7.696992 TTTTGGTGGGATAAGAGTCAAATAC 57.303 36.000 0.00 0.00 0.00 1.89
846 861 3.768468 CGCCACCGGTTAACAAAATAT 57.232 42.857 2.97 0.00 0.00 1.28
876 892 4.587584 AAGCTAGGATAAGTACGGAAGC 57.412 45.455 0.00 0.00 0.00 3.86
894 917 8.611654 ACGGAAGCTTAGTATAAAGTGAAAAA 57.388 30.769 0.00 0.00 0.00 1.94
1063 1086 0.539051 CTTGGATGAGAAGGAGCCGT 59.461 55.000 0.00 0.00 0.00 5.68
1090 1113 1.112916 TCAGAAGTCGGCCAGTGTCA 61.113 55.000 2.24 0.00 0.00 3.58
1094 1117 0.468226 AAGTCGGCCAGTGTCAAGAA 59.532 50.000 2.24 0.00 0.00 2.52
1113 1136 2.317609 CCTGCTTGTTCGGACCACG 61.318 63.158 0.00 0.00 46.11 4.94
1138 1161 3.325716 ACTTACCACGGTTACCATCAAGT 59.674 43.478 1.13 0.53 0.00 3.16
1230 1255 7.417496 ACCTACAAGTTCTTCACGATAAAAC 57.583 36.000 0.00 0.00 0.00 2.43
1240 1265 7.490962 TCTTCACGATAAAACTTGTGAACAT 57.509 32.000 2.77 0.00 42.12 2.71
1245 1270 9.647797 TCACGATAAAACTTGTGAACATATACT 57.352 29.630 0.00 0.00 36.76 2.12
1252 1277 9.959721 AAAACTTGTGAACATATACTACTCCAT 57.040 29.630 0.00 0.00 0.00 3.41
1253 1278 8.948631 AACTTGTGAACATATACTACTCCATG 57.051 34.615 0.00 0.00 0.00 3.66
1254 1279 8.079211 ACTTGTGAACATATACTACTCCATGT 57.921 34.615 0.00 0.00 33.12 3.21
1255 1280 8.198109 ACTTGTGAACATATACTACTCCATGTC 58.802 37.037 0.00 0.00 31.40 3.06
1256 1281 7.898014 TGTGAACATATACTACTCCATGTCT 57.102 36.000 0.00 0.00 31.40 3.41
1257 1282 7.941919 TGTGAACATATACTACTCCATGTCTC 58.058 38.462 0.00 0.00 31.40 3.36
1258 1283 7.014326 TGTGAACATATACTACTCCATGTCTCC 59.986 40.741 0.00 0.00 31.40 3.71
1259 1284 7.014326 GTGAACATATACTACTCCATGTCTCCA 59.986 40.741 0.00 0.00 31.40 3.86
1260 1285 7.730332 TGAACATATACTACTCCATGTCTCCAT 59.270 37.037 0.00 0.00 31.40 3.41
1261 1286 7.710676 ACATATACTACTCCATGTCTCCATC 57.289 40.000 0.00 0.00 0.00 3.51
1262 1287 7.474445 ACATATACTACTCCATGTCTCCATCT 58.526 38.462 0.00 0.00 0.00 2.90
1263 1288 8.615705 ACATATACTACTCCATGTCTCCATCTA 58.384 37.037 0.00 0.00 0.00 1.98
1264 1289 9.639563 CATATACTACTCCATGTCTCCATCTAT 57.360 37.037 0.00 0.00 0.00 1.98
1268 1293 8.359875 ACTACTCCATGTCTCCATCTATATTG 57.640 38.462 0.00 0.00 0.00 1.90
1269 1294 8.173412 ACTACTCCATGTCTCCATCTATATTGA 58.827 37.037 0.00 0.00 0.00 2.57
1270 1295 7.862274 ACTCCATGTCTCCATCTATATTGAA 57.138 36.000 0.00 0.00 0.00 2.69
1271 1296 7.675062 ACTCCATGTCTCCATCTATATTGAAC 58.325 38.462 0.00 0.00 0.00 3.18
1272 1297 7.512058 ACTCCATGTCTCCATCTATATTGAACT 59.488 37.037 0.00 0.00 0.00 3.01
1273 1298 7.901029 TCCATGTCTCCATCTATATTGAACTC 58.099 38.462 0.00 0.00 0.00 3.01
1274 1299 7.510343 TCCATGTCTCCATCTATATTGAACTCA 59.490 37.037 0.00 0.00 0.00 3.41
1275 1300 7.818446 CCATGTCTCCATCTATATTGAACTCAG 59.182 40.741 0.00 0.00 0.00 3.35
1276 1301 8.583296 CATGTCTCCATCTATATTGAACTCAGA 58.417 37.037 0.00 0.00 0.00 3.27
1277 1302 8.539117 TGTCTCCATCTATATTGAACTCAGAA 57.461 34.615 0.00 0.00 0.00 3.02
1278 1303 8.981659 TGTCTCCATCTATATTGAACTCAGAAA 58.018 33.333 0.00 0.00 0.00 2.52
1279 1304 9.255304 GTCTCCATCTATATTGAACTCAGAAAC 57.745 37.037 0.00 0.00 0.00 2.78
1280 1305 8.138074 TCTCCATCTATATTGAACTCAGAAACG 58.862 37.037 0.00 0.00 0.00 3.60
1281 1306 8.007405 TCCATCTATATTGAACTCAGAAACGA 57.993 34.615 0.00 0.00 0.00 3.85
1282 1307 8.474831 TCCATCTATATTGAACTCAGAAACGAA 58.525 33.333 0.00 0.00 0.00 3.85
1283 1308 8.543774 CCATCTATATTGAACTCAGAAACGAAC 58.456 37.037 0.00 0.00 0.00 3.95
1284 1309 9.307121 CATCTATATTGAACTCAGAAACGAACT 57.693 33.333 0.00 0.00 0.00 3.01
1285 1310 9.877178 ATCTATATTGAACTCAGAAACGAACTT 57.123 29.630 0.00 0.00 0.00 2.66
1288 1313 8.827177 ATATTGAACTCAGAAACGAACTTACA 57.173 30.769 0.00 0.00 0.00 2.41
1289 1314 7.730364 ATTGAACTCAGAAACGAACTTACAT 57.270 32.000 0.00 0.00 0.00 2.29
1290 1315 7.548196 TTGAACTCAGAAACGAACTTACATT 57.452 32.000 0.00 0.00 0.00 2.71
1291 1316 8.651391 TTGAACTCAGAAACGAACTTACATTA 57.349 30.769 0.00 0.00 0.00 1.90
1292 1317 8.651391 TGAACTCAGAAACGAACTTACATTAA 57.349 30.769 0.00 0.00 0.00 1.40
1293 1318 8.761497 TGAACTCAGAAACGAACTTACATTAAG 58.239 33.333 0.00 0.00 41.51 1.85
1309 1334 9.530633 CTTACATTAAGTTACACAGATACTCCC 57.469 37.037 0.00 0.00 0.00 4.30
1310 1335 7.735326 ACATTAAGTTACACAGATACTCCCT 57.265 36.000 0.00 0.00 0.00 4.20
1311 1336 7.783042 ACATTAAGTTACACAGATACTCCCTC 58.217 38.462 0.00 0.00 0.00 4.30
1312 1337 6.786967 TTAAGTTACACAGATACTCCCTCC 57.213 41.667 0.00 0.00 0.00 4.30
1313 1338 4.332683 AGTTACACAGATACTCCCTCCA 57.667 45.455 0.00 0.00 0.00 3.86
1314 1339 4.884961 AGTTACACAGATACTCCCTCCAT 58.115 43.478 0.00 0.00 0.00 3.41
1315 1340 5.281314 AGTTACACAGATACTCCCTCCATT 58.719 41.667 0.00 0.00 0.00 3.16
1316 1341 5.364157 AGTTACACAGATACTCCCTCCATTC 59.636 44.000 0.00 0.00 0.00 2.67
1317 1342 4.000928 ACACAGATACTCCCTCCATTCT 57.999 45.455 0.00 0.00 0.00 2.40
1318 1343 5.144159 ACACAGATACTCCCTCCATTCTA 57.856 43.478 0.00 0.00 0.00 2.10
1319 1344 5.529289 ACACAGATACTCCCTCCATTCTAA 58.471 41.667 0.00 0.00 0.00 2.10
1320 1345 5.964477 ACACAGATACTCCCTCCATTCTAAA 59.036 40.000 0.00 0.00 0.00 1.85
1321 1346 6.443849 ACACAGATACTCCCTCCATTCTAAAA 59.556 38.462 0.00 0.00 0.00 1.52
1322 1347 7.127955 ACACAGATACTCCCTCCATTCTAAAAT 59.872 37.037 0.00 0.00 0.00 1.82
1323 1348 8.651389 CACAGATACTCCCTCCATTCTAAAATA 58.349 37.037 0.00 0.00 0.00 1.40
1324 1349 9.225682 ACAGATACTCCCTCCATTCTAAAATAA 57.774 33.333 0.00 0.00 0.00 1.40
1325 1350 9.717942 CAGATACTCCCTCCATTCTAAAATAAG 57.282 37.037 0.00 0.00 0.00 1.73
1326 1351 9.453830 AGATACTCCCTCCATTCTAAAATAAGT 57.546 33.333 0.00 0.00 0.00 2.24
1327 1352 9.495572 GATACTCCCTCCATTCTAAAATAAGTG 57.504 37.037 0.00 0.00 0.00 3.16
1328 1353 7.272144 ACTCCCTCCATTCTAAAATAAGTGT 57.728 36.000 0.00 0.00 0.00 3.55
1329 1354 7.339482 ACTCCCTCCATTCTAAAATAAGTGTC 58.661 38.462 0.00 0.00 0.00 3.67
1330 1355 7.182930 ACTCCCTCCATTCTAAAATAAGTGTCT 59.817 37.037 0.00 0.00 0.00 3.41
1331 1356 7.928873 TCCCTCCATTCTAAAATAAGTGTCTT 58.071 34.615 0.00 0.00 0.00 3.01
1332 1357 7.829211 TCCCTCCATTCTAAAATAAGTGTCTTG 59.171 37.037 0.00 0.00 0.00 3.02
1333 1358 7.829211 CCCTCCATTCTAAAATAAGTGTCTTGA 59.171 37.037 0.00 0.00 0.00 3.02
1334 1359 8.887717 CCTCCATTCTAAAATAAGTGTCTTGAG 58.112 37.037 0.00 0.00 0.00 3.02
1335 1360 9.442047 CTCCATTCTAAAATAAGTGTCTTGAGT 57.558 33.333 0.00 0.00 0.00 3.41
1336 1361 9.793259 TCCATTCTAAAATAAGTGTCTTGAGTT 57.207 29.630 0.00 0.00 0.00 3.01
1337 1362 9.831737 CCATTCTAAAATAAGTGTCTTGAGTTG 57.168 33.333 0.00 0.00 0.00 3.16
1346 1371 8.934507 ATAAGTGTCTTGAGTTGTATTAGAGC 57.065 34.615 0.00 0.00 0.00 4.09
1347 1372 6.597832 AGTGTCTTGAGTTGTATTAGAGCT 57.402 37.500 0.00 0.00 0.00 4.09
1348 1373 7.704578 AGTGTCTTGAGTTGTATTAGAGCTA 57.295 36.000 0.00 0.00 0.00 3.32
1349 1374 7.767261 AGTGTCTTGAGTTGTATTAGAGCTAG 58.233 38.462 0.00 0.00 0.00 3.42
1350 1375 7.394923 AGTGTCTTGAGTTGTATTAGAGCTAGT 59.605 37.037 0.00 0.00 0.00 2.57
1351 1376 8.675504 GTGTCTTGAGTTGTATTAGAGCTAGTA 58.324 37.037 0.00 0.00 0.00 1.82
1352 1377 8.675504 TGTCTTGAGTTGTATTAGAGCTAGTAC 58.324 37.037 0.00 3.93 0.00 2.73
1353 1378 8.675504 GTCTTGAGTTGTATTAGAGCTAGTACA 58.324 37.037 8.30 8.30 36.76 2.90
1354 1379 9.239551 TCTTGAGTTGTATTAGAGCTAGTACAA 57.760 33.333 16.71 16.71 42.21 2.41
1355 1380 9.856488 CTTGAGTTGTATTAGAGCTAGTACAAA 57.144 33.333 20.20 8.52 44.28 2.83
1356 1381 9.856488 TTGAGTTGTATTAGAGCTAGTACAAAG 57.144 33.333 20.20 0.00 44.28 2.77
1357 1382 9.021807 TGAGTTGTATTAGAGCTAGTACAAAGT 57.978 33.333 20.20 13.80 44.28 2.66
1358 1383 9.857957 GAGTTGTATTAGAGCTAGTACAAAGTT 57.142 33.333 20.20 12.64 44.28 2.66
1359 1384 9.640963 AGTTGTATTAGAGCTAGTACAAAGTTG 57.359 33.333 20.20 0.00 44.28 3.16
1360 1385 9.635520 GTTGTATTAGAGCTAGTACAAAGTTGA 57.364 33.333 20.20 2.96 44.28 3.18
1361 1386 9.856488 TTGTATTAGAGCTAGTACAAAGTTGAG 57.144 33.333 17.74 0.00 41.81 3.02
1362 1387 9.239551 TGTATTAGAGCTAGTACAAAGTTGAGA 57.760 33.333 9.55 0.00 36.00 3.27
1363 1388 9.505995 GTATTAGAGCTAGTACAAAGTTGAGAC 57.494 37.037 0.00 0.00 31.20 3.36
1364 1389 7.520451 TTAGAGCTAGTACAAAGTTGAGACA 57.480 36.000 0.00 0.00 0.00 3.41
1365 1390 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
1366 1391 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
1367 1392 6.041069 AGAGCTAGTACAAAGTTGAGACACTT 59.959 38.462 0.00 0.00 38.74 3.16
1368 1393 7.230913 AGAGCTAGTACAAAGTTGAGACACTTA 59.769 37.037 0.00 0.00 35.87 2.24
1369 1394 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
1370 1395 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
1371 1396 8.436200 GCTAGTACAAAGTTGAGACACTTATTG 58.564 37.037 0.00 0.00 35.87 1.90
1372 1397 9.477484 CTAGTACAAAGTTGAGACACTTATTGT 57.523 33.333 0.00 0.00 43.10 2.71
1383 1408 2.991250 CACTTATTGTGGGACAGAGGG 58.009 52.381 0.00 0.00 41.80 4.30
1384 1409 2.571653 CACTTATTGTGGGACAGAGGGA 59.428 50.000 0.00 0.00 41.80 4.20
1385 1410 2.840651 ACTTATTGTGGGACAGAGGGAG 59.159 50.000 0.00 0.00 41.80 4.30
1386 1411 2.642171 TATTGTGGGACAGAGGGAGT 57.358 50.000 0.00 0.00 41.80 3.85
1387 1412 2.642171 ATTGTGGGACAGAGGGAGTA 57.358 50.000 0.00 0.00 41.80 2.59
1388 1413 1.938585 TTGTGGGACAGAGGGAGTAG 58.061 55.000 0.00 0.00 41.80 2.57
1457 1482 7.938563 AATGCGCAGAGTTAAAATTTGTTAA 57.061 28.000 18.32 0.00 0.00 2.01
1467 1492 9.458374 GAGTTAAAATTTGTTAAGTGCAGCTAA 57.542 29.630 0.00 0.00 28.80 3.09
1478 1503 2.162681 GTGCAGCTAACAGGGTTTCAT 58.837 47.619 0.00 0.00 0.00 2.57
1484 1509 2.755103 GCTAACAGGGTTTCATGGGAAG 59.245 50.000 0.00 0.00 33.82 3.46
1485 1510 3.814316 GCTAACAGGGTTTCATGGGAAGT 60.814 47.826 0.00 0.00 33.82 3.01
1498 1526 9.678941 GTTTCATGGGAAGTAAAAAGAAAGTAG 57.321 33.333 0.00 0.00 33.82 2.57
1503 1531 8.446599 TGGGAAGTAAAAAGAAAGTAGAACAG 57.553 34.615 0.00 0.00 0.00 3.16
1515 1543 7.227156 AGAAAGTAGAACAGTTGGATGTGATT 58.773 34.615 0.00 0.00 32.52 2.57
1566 1686 5.524646 CCCGTGTTTACTTTACAACTTGAGA 59.475 40.000 0.00 0.00 0.00 3.27
1598 1718 8.589629 GTTGAATCTGATATGAATTTGTTGCAC 58.410 33.333 0.00 0.00 0.00 4.57
1600 1720 5.233957 TCTGATATGAATTTGTTGCACCG 57.766 39.130 0.00 0.00 0.00 4.94
1601 1721 4.940654 TCTGATATGAATTTGTTGCACCGA 59.059 37.500 0.00 0.00 0.00 4.69
1602 1722 5.414144 TCTGATATGAATTTGTTGCACCGAA 59.586 36.000 0.00 0.00 0.00 4.30
1603 1723 6.095300 TCTGATATGAATTTGTTGCACCGAAT 59.905 34.615 0.00 0.00 0.00 3.34
1604 1724 6.035217 TGATATGAATTTGTTGCACCGAATG 58.965 36.000 0.00 0.00 0.00 2.67
1650 1779 6.775594 AGCCTTTTTCTTTACAGTTTGTCT 57.224 33.333 0.00 0.00 0.00 3.41
1651 1780 7.875327 AGCCTTTTTCTTTACAGTTTGTCTA 57.125 32.000 0.00 0.00 0.00 2.59
1652 1781 7.704271 AGCCTTTTTCTTTACAGTTTGTCTAC 58.296 34.615 0.00 0.00 0.00 2.59
1653 1782 7.556635 AGCCTTTTTCTTTACAGTTTGTCTACT 59.443 33.333 0.00 0.00 0.00 2.57
1654 1783 8.188799 GCCTTTTTCTTTACAGTTTGTCTACTT 58.811 33.333 0.00 0.00 0.00 2.24
1655 1784 9.717892 CCTTTTTCTTTACAGTTTGTCTACTTC 57.282 33.333 0.00 0.00 0.00 3.01
1658 1787 8.780846 TTTCTTTACAGTTTGTCTACTTCACA 57.219 30.769 0.00 0.00 0.00 3.58
1659 1788 8.958119 TTCTTTACAGTTTGTCTACTTCACAT 57.042 30.769 0.00 0.00 0.00 3.21
1660 1789 8.958119 TCTTTACAGTTTGTCTACTTCACATT 57.042 30.769 0.00 0.00 0.00 2.71
1665 1794 8.539770 ACAGTTTGTCTACTTCACATTAGATG 57.460 34.615 0.00 0.00 0.00 2.90
1666 1795 8.150945 ACAGTTTGTCTACTTCACATTAGATGT 58.849 33.333 0.00 0.00 46.22 3.06
1667 1796 8.993121 CAGTTTGTCTACTTCACATTAGATGTT 58.007 33.333 0.00 0.00 42.70 2.71
1668 1797 9.561069 AGTTTGTCTACTTCACATTAGATGTTT 57.439 29.630 0.00 0.00 42.70 2.83
1691 1820 7.817418 TTTTTAAGGATGTCACAACTAAGCT 57.183 32.000 0.00 0.00 0.00 3.74
1692 1821 7.435068 TTTTAAGGATGTCACAACTAAGCTC 57.565 36.000 0.00 0.00 0.00 4.09
1693 1822 3.618690 AGGATGTCACAACTAAGCTCC 57.381 47.619 0.00 0.00 0.00 4.70
1694 1823 2.237392 AGGATGTCACAACTAAGCTCCC 59.763 50.000 0.00 0.00 0.00 4.30
1695 1824 2.027192 GGATGTCACAACTAAGCTCCCA 60.027 50.000 0.00 0.00 0.00 4.37
1696 1825 3.370953 GGATGTCACAACTAAGCTCCCAT 60.371 47.826 0.00 0.00 0.00 4.00
1697 1826 4.141711 GGATGTCACAACTAAGCTCCCATA 60.142 45.833 0.00 0.00 0.00 2.74
1698 1827 4.901197 TGTCACAACTAAGCTCCCATAA 57.099 40.909 0.00 0.00 0.00 1.90
1699 1828 5.235850 TGTCACAACTAAGCTCCCATAAA 57.764 39.130 0.00 0.00 0.00 1.40
1700 1829 5.815581 TGTCACAACTAAGCTCCCATAAAT 58.184 37.500 0.00 0.00 0.00 1.40
1701 1830 6.953101 TGTCACAACTAAGCTCCCATAAATA 58.047 36.000 0.00 0.00 0.00 1.40
1702 1831 7.573710 TGTCACAACTAAGCTCCCATAAATAT 58.426 34.615 0.00 0.00 0.00 1.28
1703 1832 8.710239 TGTCACAACTAAGCTCCCATAAATATA 58.290 33.333 0.00 0.00 0.00 0.86
1704 1833 9.726438 GTCACAACTAAGCTCCCATAAATATAT 57.274 33.333 0.00 0.00 0.00 0.86
1713 1842 8.970859 AGCTCCCATAAATATATAATGCAGTC 57.029 34.615 0.00 0.82 0.00 3.51
1714 1843 8.551440 AGCTCCCATAAATATATAATGCAGTCA 58.449 33.333 0.00 0.00 0.00 3.41
1715 1844 9.347240 GCTCCCATAAATATATAATGCAGTCAT 57.653 33.333 0.00 0.00 33.53 3.06
1762 1891 7.484035 AAAATAGATCGCAAATAGAGTGGAC 57.516 36.000 0.00 0.00 0.00 4.02
1763 1892 5.791336 ATAGATCGCAAATAGAGTGGACA 57.209 39.130 0.00 0.00 0.00 4.02
1764 1893 4.679373 AGATCGCAAATAGAGTGGACAT 57.321 40.909 0.00 0.00 0.00 3.06
1765 1894 5.028549 AGATCGCAAATAGAGTGGACATT 57.971 39.130 0.00 0.00 0.00 2.71
1766 1895 6.161855 AGATCGCAAATAGAGTGGACATTA 57.838 37.500 0.00 0.00 0.00 1.90
1767 1896 6.763355 AGATCGCAAATAGAGTGGACATTAT 58.237 36.000 0.00 0.00 0.00 1.28
1768 1897 7.220030 AGATCGCAAATAGAGTGGACATTATT 58.780 34.615 0.00 0.00 0.00 1.40
1769 1898 7.716998 AGATCGCAAATAGAGTGGACATTATTT 59.283 33.333 0.00 0.00 0.00 1.40
1770 1899 7.624360 TCGCAAATAGAGTGGACATTATTTT 57.376 32.000 0.00 0.00 0.00 1.82
1771 1900 8.725405 TCGCAAATAGAGTGGACATTATTTTA 57.275 30.769 0.00 0.00 0.00 1.52
1772 1901 8.826710 TCGCAAATAGAGTGGACATTATTTTAG 58.173 33.333 0.00 0.00 0.00 1.85
1773 1902 8.826710 CGCAAATAGAGTGGACATTATTTTAGA 58.173 33.333 0.00 0.00 0.00 2.10
1779 1908 8.723942 AGAGTGGACATTATTTTAGATGTGAC 57.276 34.615 0.00 0.00 36.67 3.67
1780 1909 8.321353 AGAGTGGACATTATTTTAGATGTGACA 58.679 33.333 0.00 0.00 36.67 3.58
1781 1910 9.113838 GAGTGGACATTATTTTAGATGTGACAT 57.886 33.333 0.00 0.00 36.67 3.06
1816 1945 7.151999 CATCTAGATGTGTCCTATACAGACC 57.848 44.000 22.42 0.00 39.29 3.85
1817 1946 5.632118 TCTAGATGTGTCCTATACAGACCC 58.368 45.833 0.00 0.00 39.29 4.46
1887 2017 4.510167 AATGTCGAAATTCATCCTCCCT 57.490 40.909 0.00 0.00 0.00 4.20
1895 2025 8.899771 GTCGAAATTCATCCTCCCTTTTTAATA 58.100 33.333 0.00 0.00 0.00 0.98
1930 2060 7.832187 AGGAGTAAGTATATAGAGGACTCATGC 59.168 40.741 1.75 0.00 34.79 4.06
1931 2061 7.612244 GGAGTAAGTATATAGAGGACTCATGCA 59.388 40.741 1.75 0.00 34.79 3.96
1932 2062 8.941995 AGTAAGTATATAGAGGACTCATGCAA 57.058 34.615 1.75 0.00 0.00 4.08
1933 2063 9.540538 AGTAAGTATATAGAGGACTCATGCAAT 57.459 33.333 1.75 0.00 0.00 3.56
1990 2120 9.062524 ACTAAAAGCTTATGTGTGACAAACATA 57.937 29.630 13.52 13.52 41.97 2.29
2001 2131 9.656040 ATGTGTGACAAACATATTTATGCAATT 57.344 25.926 9.63 0.00 41.97 2.32
2002 2132 9.486497 TGTGTGACAAACATATTTATGCAATTT 57.514 25.926 0.00 0.00 41.97 1.82
2038 2171 1.533625 GTGTTTGCAGGCTCATGGTA 58.466 50.000 0.00 0.00 0.00 3.25
2048 2181 1.065551 GGCTCATGGTATTTGTTCGGC 59.934 52.381 0.00 0.00 0.00 5.54
2081 2214 1.536766 TGCTGTTCTTCAAATGGCGAG 59.463 47.619 0.00 0.00 0.00 5.03
2096 2229 0.109086 GCGAGTCAGCACTGCTCTTA 60.109 55.000 0.00 0.00 36.40 2.10
2098 2231 1.068264 CGAGTCAGCACTGCTCTTACA 60.068 52.381 0.00 0.00 36.40 2.41
2099 2232 2.605030 GAGTCAGCACTGCTCTTACAG 58.395 52.381 0.00 0.00 43.59 2.74
2124 2257 3.011760 GCGACGGCACAACTACAGC 62.012 63.158 0.00 0.00 39.62 4.40
2269 2402 0.468226 GGCTTCCGACCATGGATGTA 59.532 55.000 21.47 0.00 38.00 2.29
2272 2405 3.214328 GCTTCCGACCATGGATGTATTT 58.786 45.455 21.47 0.00 38.00 1.40
2282 2415 3.797559 TGGATGTATTTGTCACCACCA 57.202 42.857 0.00 0.00 0.00 4.17
3421 3554 1.110518 TCGGCTGGATATACGGCACA 61.111 55.000 20.54 2.90 44.55 4.57
3682 3815 0.613777 ACCCGTTCACCTCCATCTTC 59.386 55.000 0.00 0.00 0.00 2.87
3756 3889 1.803519 CGAGCGCCTTCTCAGTCAC 60.804 63.158 2.29 0.00 33.41 3.67
3759 3892 1.078848 GCGCCTTCTCAGTCACCAT 60.079 57.895 0.00 0.00 0.00 3.55
3944 4077 1.898574 CAGGTGGCGCTCAAGGTTT 60.899 57.895 7.64 0.00 0.00 3.27
3964 4097 2.744377 GCGGGGAAGGAGATAGCC 59.256 66.667 0.00 0.00 0.00 3.93
4018 4155 1.296056 CCGGTGGCGGTGTAAAAGAG 61.296 60.000 0.00 0.00 0.00 2.85
4095 4232 2.742372 GCTGGCCGTGAACGTGAT 60.742 61.111 0.00 0.00 37.74 3.06
4123 4260 1.078143 GGCAGCAGTACAAGAGGGG 60.078 63.158 0.00 0.00 0.00 4.79
4243 4380 1.376037 CAAGACGTTGAGCCCCCTC 60.376 63.158 0.00 0.00 35.46 4.30
4260 4397 0.378962 CTCCTCTTGCTCGTCGTAGG 59.621 60.000 0.00 0.00 0.00 3.18
4390 4531 1.531128 CTAGTACTCCCTCCGCCCC 60.531 68.421 0.00 0.00 0.00 5.80
4391 4532 2.294170 CTAGTACTCCCTCCGCCCCA 62.294 65.000 0.00 0.00 0.00 4.96
4409 4553 5.124776 CGCCCCAAATTTGACTATTTGTCTA 59.875 40.000 19.86 0.00 45.54 2.59
4421 4565 7.649057 TGACTATTTGTCTAGATACGGATGTG 58.351 38.462 0.00 0.00 45.54 3.21
4422 4566 7.501225 TGACTATTTGTCTAGATACGGATGTGA 59.499 37.037 0.00 0.00 45.54 3.58
4423 4567 7.649973 ACTATTTGTCTAGATACGGATGTGAC 58.350 38.462 0.00 0.00 0.00 3.67
4426 4570 6.862711 TTGTCTAGATACGGATGTGACTAG 57.137 41.667 0.00 0.00 36.95 2.57
4512 4660 6.954944 TGTGTAATTCTGAAGTTAACTGCAC 58.045 36.000 12.58 6.81 0.00 4.57
4523 4671 4.382291 AGTTAACTGCACGTTGGTATCAA 58.618 39.130 7.48 0.00 37.05 2.57
4525 4673 5.472137 AGTTAACTGCACGTTGGTATCAAAT 59.528 36.000 7.48 0.00 37.05 2.32
4527 4675 4.159377 ACTGCACGTTGGTATCAAATTG 57.841 40.909 0.00 0.00 34.28 2.32
4532 4680 4.096382 GCACGTTGGTATCAAATTGGAGAT 59.904 41.667 0.00 0.00 34.28 2.75
4533 4681 5.295787 GCACGTTGGTATCAAATTGGAGATA 59.704 40.000 0.00 0.00 34.28 1.98
4534 4682 6.511767 GCACGTTGGTATCAAATTGGAGATAG 60.512 42.308 0.00 0.00 34.28 2.08
4535 4683 6.761242 CACGTTGGTATCAAATTGGAGATAGA 59.239 38.462 0.00 0.00 34.28 1.98
4536 4684 7.279981 CACGTTGGTATCAAATTGGAGATAGAA 59.720 37.037 0.00 0.00 34.28 2.10
4537 4685 7.993183 ACGTTGGTATCAAATTGGAGATAGAAT 59.007 33.333 0.00 0.00 34.28 2.40
4542 4690 8.936864 GGTATCAAATTGGAGATAGAATAACGG 58.063 37.037 0.00 0.00 0.00 4.44
4548 4696 6.740944 TTGGAGATAGAATAACGGATTGGA 57.259 37.500 0.00 0.00 0.00 3.53
4587 5066 1.215173 TGATAGTGGCAAATCTGGGGG 59.785 52.381 11.18 0.00 0.00 5.40
4590 5069 1.142688 AGTGGCAAATCTGGGGGAGT 61.143 55.000 0.00 0.00 0.00 3.85
4592 5071 1.139498 TGGCAAATCTGGGGGAGTCA 61.139 55.000 0.00 0.00 0.00 3.41
4608 5088 6.551227 GGGGGAGTCATAAAAATTGAGCTAAT 59.449 38.462 0.00 0.00 0.00 1.73
4631 5111 4.871557 TCCTCGTATAAACCCATTTTGACG 59.128 41.667 0.00 0.00 38.37 4.35
4645 5125 3.363341 TTTGACGGGAAAATGACAAGC 57.637 42.857 0.00 0.00 0.00 4.01
4646 5126 1.243902 TGACGGGAAAATGACAAGCC 58.756 50.000 0.00 0.00 0.00 4.35
4682 5162 5.695851 AGGTACTGATGTTTTTGCAGAAG 57.304 39.130 0.00 0.00 37.18 2.85
4683 5163 4.022849 AGGTACTGATGTTTTTGCAGAAGC 60.023 41.667 0.00 0.00 37.18 3.86
4690 5171 0.758123 TTTTTGCAGAAGCCCCCTTG 59.242 50.000 0.00 0.00 41.13 3.61
4706 5187 5.306937 GCCCCCTTGCTTTATATTTAACCAT 59.693 40.000 0.00 0.00 0.00 3.55
4708 5189 6.223120 CCCCTTGCTTTATATTTAACCATGC 58.777 40.000 0.00 0.00 0.00 4.06
4711 5192 7.768120 CCCTTGCTTTATATTTAACCATGCAAA 59.232 33.333 0.00 0.00 37.43 3.68
4712 5193 8.603181 CCTTGCTTTATATTTAACCATGCAAAC 58.397 33.333 0.00 0.00 37.43 2.93
4713 5194 7.748031 TGCTTTATATTTAACCATGCAAACG 57.252 32.000 0.00 0.00 0.00 3.60
4715 5196 6.292114 GCTTTATATTTAACCATGCAAACGCC 60.292 38.462 0.00 0.00 0.00 5.68
4716 5197 2.378445 ATTTAACCATGCAAACGCCC 57.622 45.000 0.00 0.00 0.00 6.13
4717 5198 1.333177 TTTAACCATGCAAACGCCCT 58.667 45.000 0.00 0.00 0.00 5.19
4718 5199 1.333177 TTAACCATGCAAACGCCCTT 58.667 45.000 0.00 0.00 0.00 3.95
4719 5200 0.600557 TAACCATGCAAACGCCCTTG 59.399 50.000 0.00 0.00 0.00 3.61
4722 5203 0.600557 CCATGCAAACGCCCTTGTTA 59.399 50.000 0.00 0.00 0.00 2.41
4723 5204 1.402720 CCATGCAAACGCCCTTGTTAG 60.403 52.381 0.00 0.00 0.00 2.34
4724 5205 0.243636 ATGCAAACGCCCTTGTTAGC 59.756 50.000 0.00 0.00 0.00 3.09
4726 5207 0.313987 GCAAACGCCCTTGTTAGCTT 59.686 50.000 0.00 0.00 0.00 3.74
4729 5210 3.551250 GCAAACGCCCTTGTTAGCTTAAA 60.551 43.478 0.00 0.00 0.00 1.52
4742 5223 7.996098 TGTTAGCTTAAAACAAGGCTATTCT 57.004 32.000 0.00 0.00 37.18 2.40
4789 5276 1.026718 CCTTCCATCACGACAAGCCC 61.027 60.000 0.00 0.00 0.00 5.19
4863 5350 2.038975 CCGACTCCCCCTTCCTCA 59.961 66.667 0.00 0.00 0.00 3.86
4873 5360 1.064389 CCCCTTCCTCATGTTCCTTCC 60.064 57.143 0.00 0.00 0.00 3.46
4876 5363 3.245407 CCCTTCCTCATGTTCCTTCCTTT 60.245 47.826 0.00 0.00 0.00 3.11
4892 5383 1.557371 CCTTTTCCTCCTCCTCACTCC 59.443 57.143 0.00 0.00 0.00 3.85
4893 5384 2.260822 CTTTTCCTCCTCCTCACTCCA 58.739 52.381 0.00 0.00 0.00 3.86
4894 5385 2.415983 TTTCCTCCTCCTCACTCCAA 57.584 50.000 0.00 0.00 0.00 3.53
4905 5396 5.136068 TCCTCACTCCAAGTATCTCATCT 57.864 43.478 0.00 0.00 0.00 2.90
4908 5399 4.219115 TCACTCCAAGTATCTCATCTCCC 58.781 47.826 0.00 0.00 0.00 4.30
4915 5406 5.139727 CAAGTATCTCATCTCCCTGTCTCT 58.860 45.833 0.00 0.00 0.00 3.10
4918 5409 4.541250 ATCTCATCTCCCTGTCTCTCTT 57.459 45.455 0.00 0.00 0.00 2.85
4919 5410 5.661503 ATCTCATCTCCCTGTCTCTCTTA 57.338 43.478 0.00 0.00 0.00 2.10
4921 5412 4.476846 TCTCATCTCCCTGTCTCTCTTAGT 59.523 45.833 0.00 0.00 0.00 2.24
4925 5416 2.828520 CTCCCTGTCTCTCTTAGTGCAA 59.171 50.000 0.00 0.00 0.00 4.08
4944 5435 1.348064 AGAACCTCCATGGACGAACA 58.652 50.000 11.44 0.00 39.71 3.18
4948 5439 1.447838 CTCCATGGACGAACACCCG 60.448 63.158 11.44 0.00 0.00 5.28
4956 5447 4.452733 CGAACACCCGAGCTCCCC 62.453 72.222 8.47 0.00 0.00 4.81
4957 5448 4.097361 GAACACCCGAGCTCCCCC 62.097 72.222 8.47 0.00 0.00 5.40
4974 5465 4.498520 CGCAGCCGATCTGGACGT 62.499 66.667 7.64 0.00 43.06 4.34
5019 5510 3.016971 CCAGATCTGGTGCCCCCA 61.017 66.667 30.55 0.00 45.53 4.96
5020 5511 2.389449 CCAGATCTGGTGCCCCCAT 61.389 63.158 30.55 0.00 44.15 4.00
5021 5512 1.152819 CAGATCTGGTGCCCCCATG 60.153 63.158 15.38 0.00 44.15 3.66
5022 5513 2.196776 GATCTGGTGCCCCCATGG 59.803 66.667 4.14 4.14 44.15 3.66
5031 5522 2.436109 CCCCCATGGCCTAATCCG 59.564 66.667 6.09 0.00 0.00 4.18
5032 5523 2.282462 CCCCATGGCCTAATCCGC 60.282 66.667 6.09 0.00 0.00 5.54
5034 5525 2.282462 CCATGGCCTAATCCGCCC 60.282 66.667 3.32 0.00 46.48 6.13
5035 5526 2.515398 CATGGCCTAATCCGCCCA 59.485 61.111 3.32 0.00 46.48 5.36
5036 5527 1.075482 CATGGCCTAATCCGCCCAT 59.925 57.895 3.32 0.00 46.48 4.00
5037 5528 0.540365 CATGGCCTAATCCGCCCATT 60.540 55.000 3.32 0.00 46.48 3.16
5038 5529 0.251341 ATGGCCTAATCCGCCCATTC 60.251 55.000 3.32 0.00 46.48 2.67
5039 5530 1.352622 TGGCCTAATCCGCCCATTCT 61.353 55.000 3.32 0.00 46.48 2.40
5040 5531 0.606673 GGCCTAATCCGCCCATTCTC 60.607 60.000 0.00 0.00 40.78 2.87
5041 5532 0.108585 GCCTAATCCGCCCATTCTCA 59.891 55.000 0.00 0.00 0.00 3.27
5042 5533 1.884235 CCTAATCCGCCCATTCTCAC 58.116 55.000 0.00 0.00 0.00 3.51
5043 5534 1.417890 CCTAATCCGCCCATTCTCACT 59.582 52.381 0.00 0.00 0.00 3.41
5044 5535 2.487934 CTAATCCGCCCATTCTCACTG 58.512 52.381 0.00 0.00 0.00 3.66
5045 5536 0.749454 AATCCGCCCATTCTCACTGC 60.749 55.000 0.00 0.00 0.00 4.40
5046 5537 2.615227 ATCCGCCCATTCTCACTGCC 62.615 60.000 0.00 0.00 0.00 4.85
5047 5538 2.825836 CGCCCATTCTCACTGCCC 60.826 66.667 0.00 0.00 0.00 5.36
5048 5539 2.825836 GCCCATTCTCACTGCCCG 60.826 66.667 0.00 0.00 0.00 6.13
5049 5540 2.825836 CCCATTCTCACTGCCCGC 60.826 66.667 0.00 0.00 0.00 6.13
5050 5541 2.046023 CCATTCTCACTGCCCGCA 60.046 61.111 0.00 0.00 0.00 5.69
5091 5845 4.157120 GTCCCATCACCCCCGTCG 62.157 72.222 0.00 0.00 0.00 5.12
5101 5855 4.096003 CCCCGTCGCCTGGTCATT 62.096 66.667 0.00 0.00 0.00 2.57
5107 5861 1.375396 TCGCCTGGTCATTGTTCGG 60.375 57.895 0.00 0.00 0.00 4.30
5111 5865 0.320421 CCTGGTCATTGTTCGGTCGT 60.320 55.000 0.00 0.00 0.00 4.34
5119 5873 2.512485 TTGTTCGGTCGTGCTAAAGA 57.488 45.000 0.00 0.00 0.00 2.52
5126 5880 2.731341 CGGTCGTGCTAAAGAAGACGAT 60.731 50.000 0.00 0.00 38.81 3.73
5127 5881 2.599082 GGTCGTGCTAAAGAAGACGATG 59.401 50.000 0.00 0.00 38.81 3.84
5159 5913 2.310538 CCTGGCCATGGTTATTTCTCC 58.689 52.381 14.67 3.58 0.00 3.71
5164 5918 3.547746 GCCATGGTTATTTCTCCGGTTA 58.452 45.455 14.67 0.00 0.00 2.85
5165 5919 3.564225 GCCATGGTTATTTCTCCGGTTAG 59.436 47.826 14.67 0.00 0.00 2.34
5166 5920 3.564225 CCATGGTTATTTCTCCGGTTAGC 59.436 47.826 2.57 0.00 0.00 3.09
5172 5926 6.111382 GGTTATTTCTCCGGTTAGCTTAGTT 58.889 40.000 0.00 0.00 0.00 2.24
5175 5929 9.154847 GTTATTTCTCCGGTTAGCTTAGTTTTA 57.845 33.333 0.00 0.00 0.00 1.52
5178 5932 7.838771 TTCTCCGGTTAGCTTAGTTTTAATC 57.161 36.000 0.00 0.00 0.00 1.75
5180 5934 5.111293 TCCGGTTAGCTTAGTTTTAATCCG 58.889 41.667 0.00 0.00 35.02 4.18
5181 5935 4.271776 CCGGTTAGCTTAGTTTTAATCCGG 59.728 45.833 0.00 0.00 45.77 5.14
5182 5936 4.271776 CGGTTAGCTTAGTTTTAATCCGGG 59.728 45.833 0.00 0.00 0.00 5.73
5183 5937 4.577693 GGTTAGCTTAGTTTTAATCCGGGG 59.422 45.833 0.00 0.00 0.00 5.73
5184 5938 3.292492 AGCTTAGTTTTAATCCGGGGG 57.708 47.619 0.00 0.00 0.00 5.40
5208 5962 1.082366 GGGCGCACGTGTAAAGTTG 60.082 57.895 18.38 0.05 0.00 3.16
5214 5968 1.191647 GCACGTGTAAAGTTGGACTCG 59.808 52.381 18.38 9.74 38.25 4.18
5215 5969 1.191647 CACGTGTAAAGTTGGACTCGC 59.808 52.381 7.58 0.00 36.34 5.03
5240 5994 2.203294 AGGTTTGACACGGCCCAC 60.203 61.111 0.00 0.00 0.00 4.61
5272 6026 9.567848 CTGGCGTGATTTAAATATAAAACAAGT 57.432 29.630 0.00 0.00 36.11 3.16
5299 6053 5.895636 TTTCTGTAATACAACATGCCAGG 57.104 39.130 0.00 0.00 0.00 4.45
5302 6056 5.321102 TCTGTAATACAACATGCCAGGTTT 58.679 37.500 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.276859 GGGGTATTGGAGGGGAACGT 61.277 60.000 0.00 0.00 0.00 3.99
1 2 0.986550 AGGGGTATTGGAGGGGAACG 60.987 60.000 0.00 0.00 0.00 3.95
2 3 1.305886 AAGGGGTATTGGAGGGGAAC 58.694 55.000 0.00 0.00 0.00 3.62
3 4 2.995765 TAAGGGGTATTGGAGGGGAA 57.004 50.000 0.00 0.00 0.00 3.97
4 5 2.995765 TTAAGGGGTATTGGAGGGGA 57.004 50.000 0.00 0.00 0.00 4.81
5 6 4.028131 GTTTTTAAGGGGTATTGGAGGGG 58.972 47.826 0.00 0.00 0.00 4.79
6 7 4.464951 GTGTTTTTAAGGGGTATTGGAGGG 59.535 45.833 0.00 0.00 0.00 4.30
7 8 4.464951 GGTGTTTTTAAGGGGTATTGGAGG 59.535 45.833 0.00 0.00 0.00 4.30
8 9 5.330233 AGGTGTTTTTAAGGGGTATTGGAG 58.670 41.667 0.00 0.00 0.00 3.86
9 10 5.342361 AGGTGTTTTTAAGGGGTATTGGA 57.658 39.130 0.00 0.00 0.00 3.53
10 11 7.541916 TTAAGGTGTTTTTAAGGGGTATTGG 57.458 36.000 0.00 0.00 0.00 3.16
11 12 7.039293 AGCTTAAGGTGTTTTTAAGGGGTATTG 60.039 37.037 6.33 0.00 38.15 1.90
12 13 7.014449 AGCTTAAGGTGTTTTTAAGGGGTATT 58.986 34.615 6.33 0.00 38.15 1.89
143 151 5.467063 GTGTCTACTTTGTTTCTCCCTTCTG 59.533 44.000 0.00 0.00 0.00 3.02
214 222 6.852404 AGGCCTCCACAATTGTATGTATATT 58.148 36.000 11.53 0.00 30.84 1.28
233 241 3.921200 CCACCTATCTAGGGGTAGGCCT 61.921 59.091 11.78 11.78 45.67 5.19
234 242 1.552719 CCACCTATCTAGGGGTAGGCC 60.553 61.905 8.11 0.00 45.67 5.19
235 243 1.939980 CCACCTATCTAGGGGTAGGC 58.060 60.000 8.11 0.00 45.67 3.93
246 254 1.217882 GTACGTGCATGCCACCTATC 58.782 55.000 16.68 0.00 41.53 2.08
251 259 3.496131 CGGGTACGTGCATGCCAC 61.496 66.667 16.68 12.32 41.15 5.01
313 322 1.416401 GCTGGAAATCGATCCCACCTA 59.584 52.381 13.58 0.00 38.82 3.08
325 334 1.188863 GCAATGGGTCTGCTGGAAAT 58.811 50.000 0.00 0.00 36.84 2.17
342 351 6.543831 GGCTCTTCCTTTGAAAGATATTAGCA 59.456 38.462 6.49 0.00 0.00 3.49
427 441 2.234908 ACTGCTAAGGAGGTGATGACAC 59.765 50.000 0.00 0.00 45.27 3.67
431 445 1.065926 TGCACTGCTAAGGAGGTGATG 60.066 52.381 1.98 0.00 32.12 3.07
607 621 6.037830 GCGTTGTTACATTAAGACCCACATAT 59.962 38.462 0.00 0.00 0.00 1.78
614 628 5.754778 ACAAAGCGTTGTTACATTAAGACC 58.245 37.500 12.50 0.00 46.01 3.85
650 664 4.686191 TTGTTTCCACATCCATTTGCTT 57.314 36.364 0.00 0.00 31.06 3.91
676 691 4.588528 AGCACTAAATTTGGTCCACATTGT 59.411 37.500 3.92 0.00 0.00 2.71
707 722 3.442996 GCTCGTAAGTGGCATGAGT 57.557 52.632 0.00 0.00 37.20 3.41
762 777 4.006989 ACACACTTAGTTTGTTCACAGCA 58.993 39.130 0.00 0.00 0.00 4.41
763 778 4.142687 ACACACACTTAGTTTGTTCACAGC 60.143 41.667 0.94 0.00 37.89 4.40
780 795 5.574891 AATGTGCAAGAACTTTACACACA 57.425 34.783 16.85 13.31 38.84 3.72
825 840 0.599060 ATTTTGTTAACCGGTGGCGG 59.401 50.000 8.52 0.00 0.00 6.13
846 861 8.304596 CCGTACTTATCCTAGCTTATTCATTCA 58.695 37.037 0.00 0.00 0.00 2.57
894 917 2.851263 TCACCCATCGTTGCTACTTT 57.149 45.000 0.00 0.00 0.00 2.66
902 925 3.009723 GACATGTCATTCACCCATCGTT 58.990 45.455 21.07 0.00 0.00 3.85
1090 1113 1.594331 GTCCGAACAAGCAGGTTCTT 58.406 50.000 15.61 0.00 43.87 2.52
1094 1117 1.227853 GTGGTCCGAACAAGCAGGT 60.228 57.895 0.00 0.00 0.00 4.00
1113 1136 4.317488 TGATGGTAACCGTGGTAAGTTTC 58.683 43.478 0.00 0.00 0.00 2.78
1199 1224 8.524870 TCGTGAAGAACTTGTAGGTTTTATAC 57.475 34.615 0.00 0.00 0.00 1.47
1202 1227 9.545105 TTTATCGTGAAGAACTTGTAGGTTTTA 57.455 29.630 0.00 0.00 0.00 1.52
1203 1228 8.441312 TTTATCGTGAAGAACTTGTAGGTTTT 57.559 30.769 0.00 0.00 0.00 2.43
1230 1255 8.417106 AGACATGGAGTAGTATATGTTCACAAG 58.583 37.037 0.00 0.00 34.18 3.16
1253 1278 9.255304 GTTTCTGAGTTCAATATAGATGGAGAC 57.745 37.037 0.00 0.00 0.00 3.36
1254 1279 8.138074 CGTTTCTGAGTTCAATATAGATGGAGA 58.862 37.037 0.00 0.00 0.00 3.71
1255 1280 8.138074 TCGTTTCTGAGTTCAATATAGATGGAG 58.862 37.037 0.00 0.00 0.00 3.86
1256 1281 8.007405 TCGTTTCTGAGTTCAATATAGATGGA 57.993 34.615 0.00 0.00 0.00 3.41
1257 1282 8.543774 GTTCGTTTCTGAGTTCAATATAGATGG 58.456 37.037 0.00 0.00 0.00 3.51
1258 1283 9.307121 AGTTCGTTTCTGAGTTCAATATAGATG 57.693 33.333 0.00 0.00 0.00 2.90
1259 1284 9.877178 AAGTTCGTTTCTGAGTTCAATATAGAT 57.123 29.630 0.00 0.00 0.00 1.98
1262 1287 9.917129 TGTAAGTTCGTTTCTGAGTTCAATATA 57.083 29.630 0.00 0.00 0.00 0.86
1263 1288 8.827177 TGTAAGTTCGTTTCTGAGTTCAATAT 57.173 30.769 0.00 0.00 0.00 1.28
1264 1289 8.827177 ATGTAAGTTCGTTTCTGAGTTCAATA 57.173 30.769 0.00 0.00 0.00 1.90
1265 1290 7.730364 ATGTAAGTTCGTTTCTGAGTTCAAT 57.270 32.000 0.00 0.00 0.00 2.57
1266 1291 7.548196 AATGTAAGTTCGTTTCTGAGTTCAA 57.452 32.000 0.00 0.00 0.00 2.69
1267 1292 8.651391 TTAATGTAAGTTCGTTTCTGAGTTCA 57.349 30.769 0.00 0.00 0.00 3.18
1268 1293 8.762426 ACTTAATGTAAGTTCGTTTCTGAGTTC 58.238 33.333 0.00 0.00 46.27 3.01
1269 1294 8.658499 ACTTAATGTAAGTTCGTTTCTGAGTT 57.342 30.769 0.00 0.00 46.27 3.01
1283 1308 9.530633 GGGAGTATCTGTGTAACTTAATGTAAG 57.469 37.037 0.00 0.00 38.04 2.34
1284 1309 9.263446 AGGGAGTATCTGTGTAACTTAATGTAA 57.737 33.333 0.00 0.00 38.04 2.41
1285 1310 8.834004 AGGGAGTATCTGTGTAACTTAATGTA 57.166 34.615 0.00 0.00 38.04 2.29
1286 1311 7.147707 GGAGGGAGTATCTGTGTAACTTAATGT 60.148 40.741 0.00 0.00 38.04 2.71
1287 1312 7.147724 TGGAGGGAGTATCTGTGTAACTTAATG 60.148 40.741 0.00 0.00 38.04 1.90
1288 1313 6.901300 TGGAGGGAGTATCTGTGTAACTTAAT 59.099 38.462 0.00 0.00 38.04 1.40
1289 1314 6.258354 TGGAGGGAGTATCTGTGTAACTTAA 58.742 40.000 0.00 0.00 38.04 1.85
1290 1315 5.834460 TGGAGGGAGTATCTGTGTAACTTA 58.166 41.667 0.00 0.00 38.04 2.24
1291 1316 4.684724 TGGAGGGAGTATCTGTGTAACTT 58.315 43.478 0.00 0.00 38.04 2.66
1292 1317 4.332683 TGGAGGGAGTATCTGTGTAACT 57.667 45.455 0.00 0.00 38.04 2.24
1293 1318 5.364157 AGAATGGAGGGAGTATCTGTGTAAC 59.636 44.000 0.00 0.00 33.73 2.50
1294 1319 5.529289 AGAATGGAGGGAGTATCTGTGTAA 58.471 41.667 0.00 0.00 33.73 2.41
1295 1320 5.144159 AGAATGGAGGGAGTATCTGTGTA 57.856 43.478 0.00 0.00 33.73 2.90
1296 1321 4.000928 AGAATGGAGGGAGTATCTGTGT 57.999 45.455 0.00 0.00 33.73 3.72
1297 1322 6.485830 TTTAGAATGGAGGGAGTATCTGTG 57.514 41.667 0.00 0.00 33.73 3.66
1298 1323 7.698163 ATTTTAGAATGGAGGGAGTATCTGT 57.302 36.000 0.00 0.00 33.73 3.41
1299 1324 9.717942 CTTATTTTAGAATGGAGGGAGTATCTG 57.282 37.037 0.00 0.00 33.73 2.90
1300 1325 9.453830 ACTTATTTTAGAATGGAGGGAGTATCT 57.546 33.333 0.00 0.00 33.73 1.98
1301 1326 9.495572 CACTTATTTTAGAATGGAGGGAGTATC 57.504 37.037 0.00 0.00 0.00 2.24
1302 1327 9.004231 ACACTTATTTTAGAATGGAGGGAGTAT 57.996 33.333 1.94 0.00 0.00 2.12
1303 1328 8.388656 ACACTTATTTTAGAATGGAGGGAGTA 57.611 34.615 1.94 0.00 0.00 2.59
1304 1329 7.182930 AGACACTTATTTTAGAATGGAGGGAGT 59.817 37.037 1.94 0.00 0.00 3.85
1305 1330 7.569240 AGACACTTATTTTAGAATGGAGGGAG 58.431 38.462 1.94 0.00 0.00 4.30
1306 1331 7.510675 AGACACTTATTTTAGAATGGAGGGA 57.489 36.000 1.94 0.00 0.00 4.20
1307 1332 7.829211 TCAAGACACTTATTTTAGAATGGAGGG 59.171 37.037 0.00 0.00 0.00 4.30
1308 1333 8.792830 TCAAGACACTTATTTTAGAATGGAGG 57.207 34.615 0.00 0.00 0.00 4.30
1309 1334 9.442047 ACTCAAGACACTTATTTTAGAATGGAG 57.558 33.333 0.00 0.00 0.00 3.86
1310 1335 9.793259 AACTCAAGACACTTATTTTAGAATGGA 57.207 29.630 0.00 0.00 0.00 3.41
1311 1336 9.831737 CAACTCAAGACACTTATTTTAGAATGG 57.168 33.333 0.00 0.00 0.00 3.16
1320 1345 9.372369 GCTCTAATACAACTCAAGACACTTATT 57.628 33.333 0.00 0.00 0.00 1.40
1321 1346 8.754080 AGCTCTAATACAACTCAAGACACTTAT 58.246 33.333 0.00 0.00 0.00 1.73
1322 1347 8.123639 AGCTCTAATACAACTCAAGACACTTA 57.876 34.615 0.00 0.00 0.00 2.24
1323 1348 6.998802 AGCTCTAATACAACTCAAGACACTT 58.001 36.000 0.00 0.00 0.00 3.16
1324 1349 6.597832 AGCTCTAATACAACTCAAGACACT 57.402 37.500 0.00 0.00 0.00 3.55
1325 1350 7.540299 ACTAGCTCTAATACAACTCAAGACAC 58.460 38.462 0.00 0.00 0.00 3.67
1326 1351 7.704578 ACTAGCTCTAATACAACTCAAGACA 57.295 36.000 0.00 0.00 0.00 3.41
1327 1352 8.675504 TGTACTAGCTCTAATACAACTCAAGAC 58.324 37.037 0.00 0.00 26.61 3.01
1328 1353 8.803397 TGTACTAGCTCTAATACAACTCAAGA 57.197 34.615 0.00 0.00 26.61 3.02
1329 1354 9.856488 TTTGTACTAGCTCTAATACAACTCAAG 57.144 33.333 9.60 0.00 37.44 3.02
1330 1355 9.856488 CTTTGTACTAGCTCTAATACAACTCAA 57.144 33.333 9.60 0.00 37.44 3.02
1331 1356 9.021807 ACTTTGTACTAGCTCTAATACAACTCA 57.978 33.333 9.60 0.00 37.44 3.41
1332 1357 9.857957 AACTTTGTACTAGCTCTAATACAACTC 57.142 33.333 9.60 0.00 37.44 3.01
1333 1358 9.640963 CAACTTTGTACTAGCTCTAATACAACT 57.359 33.333 9.60 0.00 37.44 3.16
1334 1359 9.635520 TCAACTTTGTACTAGCTCTAATACAAC 57.364 33.333 9.60 0.00 37.44 3.32
1335 1360 9.856488 CTCAACTTTGTACTAGCTCTAATACAA 57.144 33.333 6.81 6.81 36.39 2.41
1336 1361 9.239551 TCTCAACTTTGTACTAGCTCTAATACA 57.760 33.333 0.00 0.00 0.00 2.29
1337 1362 9.505995 GTCTCAACTTTGTACTAGCTCTAATAC 57.494 37.037 0.00 0.00 0.00 1.89
1338 1363 9.239551 TGTCTCAACTTTGTACTAGCTCTAATA 57.760 33.333 0.00 0.00 0.00 0.98
1339 1364 8.030106 GTGTCTCAACTTTGTACTAGCTCTAAT 58.970 37.037 0.00 0.00 0.00 1.73
1340 1365 7.230913 AGTGTCTCAACTTTGTACTAGCTCTAA 59.769 37.037 0.00 0.00 0.00 2.10
1341 1366 6.715718 AGTGTCTCAACTTTGTACTAGCTCTA 59.284 38.462 0.00 0.00 0.00 2.43
1342 1367 5.536916 AGTGTCTCAACTTTGTACTAGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
1343 1368 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
1344 1369 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
1345 1370 8.436200 CAATAAGTGTCTCAACTTTGTACTAGC 58.564 37.037 0.00 0.00 40.77 3.42
1346 1371 9.477484 ACAATAAGTGTCTCAACTTTGTACTAG 57.523 33.333 0.00 0.00 40.77 2.57
1347 1372 9.256477 CACAATAAGTGTCTCAACTTTGTACTA 57.744 33.333 0.00 0.00 43.40 1.82
1348 1373 8.142994 CACAATAAGTGTCTCAACTTTGTACT 57.857 34.615 0.00 0.00 43.40 2.73
1364 1389 2.840651 CTCCCTCTGTCCCACAATAAGT 59.159 50.000 0.00 0.00 0.00 2.24
1365 1390 2.840651 ACTCCCTCTGTCCCACAATAAG 59.159 50.000 0.00 0.00 0.00 1.73
1366 1391 2.915869 ACTCCCTCTGTCCCACAATAA 58.084 47.619 0.00 0.00 0.00 1.40
1367 1392 2.642171 ACTCCCTCTGTCCCACAATA 57.358 50.000 0.00 0.00 0.00 1.90
1368 1393 2.225650 ACTACTCCCTCTGTCCCACAAT 60.226 50.000 0.00 0.00 0.00 2.71
1369 1394 1.149288 ACTACTCCCTCTGTCCCACAA 59.851 52.381 0.00 0.00 0.00 3.33
1370 1395 0.784495 ACTACTCCCTCTGTCCCACA 59.216 55.000 0.00 0.00 0.00 4.17
1371 1396 2.291411 TGTACTACTCCCTCTGTCCCAC 60.291 54.545 0.00 0.00 0.00 4.61
1372 1397 1.997791 TGTACTACTCCCTCTGTCCCA 59.002 52.381 0.00 0.00 0.00 4.37
1373 1398 2.291411 TGTGTACTACTCCCTCTGTCCC 60.291 54.545 0.00 0.00 0.00 4.46
1374 1399 3.083122 TGTGTACTACTCCCTCTGTCC 57.917 52.381 0.00 0.00 0.00 4.02
1375 1400 6.963083 ATATTGTGTACTACTCCCTCTGTC 57.037 41.667 0.00 0.00 0.00 3.51
1376 1401 6.668283 ACAATATTGTGTACTACTCCCTCTGT 59.332 38.462 20.19 0.00 40.49 3.41
1377 1402 7.113658 ACAATATTGTGTACTACTCCCTCTG 57.886 40.000 20.19 0.00 40.49 3.35
1457 1482 1.142870 TGAAACCCTGTTAGCTGCACT 59.857 47.619 1.02 0.00 0.00 4.40
1467 1492 4.463050 TTTACTTCCCATGAAACCCTGT 57.537 40.909 0.00 0.00 0.00 4.00
1478 1503 8.050930 ACTGTTCTACTTTCTTTTTACTTCCCA 58.949 33.333 0.00 0.00 0.00 4.37
1484 1509 9.665264 CATCCAACTGTTCTACTTTCTTTTTAC 57.335 33.333 0.00 0.00 0.00 2.01
1485 1510 9.403583 ACATCCAACTGTTCTACTTTCTTTTTA 57.596 29.630 0.00 0.00 0.00 1.52
1523 1639 9.990360 AACACGGGAAAATAATTAGTCAAAAAT 57.010 25.926 0.00 0.00 0.00 1.82
1524 1640 9.819267 AAACACGGGAAAATAATTAGTCAAAAA 57.181 25.926 0.00 0.00 0.00 1.94
1543 1659 6.036300 TGTCTCAAGTTGTAAAGTAAACACGG 59.964 38.462 2.11 0.00 0.00 4.94
1544 1660 6.996106 TGTCTCAAGTTGTAAAGTAAACACG 58.004 36.000 2.11 0.00 0.00 4.49
1573 1693 7.760794 GGTGCAACAAATTCATATCAGATTCAA 59.239 33.333 0.00 0.00 39.98 2.69
1598 1718 8.638685 AGAATTCATCATTTTTAAGCATTCGG 57.361 30.769 8.44 0.00 0.00 4.30
1628 1757 7.704271 AGTAGACAAACTGTAAAGAAAAAGGC 58.296 34.615 0.00 0.00 0.00 4.35
1632 1761 9.221933 TGTGAAGTAGACAAACTGTAAAGAAAA 57.778 29.630 0.00 0.00 0.00 2.29
1633 1762 8.780846 TGTGAAGTAGACAAACTGTAAAGAAA 57.219 30.769 0.00 0.00 0.00 2.52
1634 1763 8.958119 ATGTGAAGTAGACAAACTGTAAAGAA 57.042 30.769 0.00 0.00 0.00 2.52
1635 1764 8.958119 AATGTGAAGTAGACAAACTGTAAAGA 57.042 30.769 0.00 0.00 0.00 2.52
1639 1768 9.639601 CATCTAATGTGAAGTAGACAAACTGTA 57.360 33.333 0.00 0.00 0.00 2.74
1640 1769 8.150945 ACATCTAATGTGAAGTAGACAAACTGT 58.849 33.333 0.00 0.00 43.01 3.55
1641 1770 8.539770 ACATCTAATGTGAAGTAGACAAACTG 57.460 34.615 0.00 0.00 43.01 3.16
1642 1771 9.561069 AAACATCTAATGTGAAGTAGACAAACT 57.439 29.630 0.00 0.00 44.07 2.66
1667 1796 7.040686 GGAGCTTAGTTGTGACATCCTTAAAAA 60.041 37.037 0.00 0.00 0.00 1.94
1668 1797 6.430000 GGAGCTTAGTTGTGACATCCTTAAAA 59.570 38.462 0.00 0.00 0.00 1.52
1669 1798 5.938125 GGAGCTTAGTTGTGACATCCTTAAA 59.062 40.000 0.00 0.00 0.00 1.52
1670 1799 5.488341 GGAGCTTAGTTGTGACATCCTTAA 58.512 41.667 0.00 0.00 0.00 1.85
1671 1800 4.081087 GGGAGCTTAGTTGTGACATCCTTA 60.081 45.833 0.00 0.00 0.00 2.69
1672 1801 3.307762 GGGAGCTTAGTTGTGACATCCTT 60.308 47.826 0.00 0.00 0.00 3.36
1673 1802 2.237392 GGGAGCTTAGTTGTGACATCCT 59.763 50.000 0.00 0.00 0.00 3.24
1674 1803 2.027192 TGGGAGCTTAGTTGTGACATCC 60.027 50.000 0.00 0.00 0.00 3.51
1675 1804 3.334583 TGGGAGCTTAGTTGTGACATC 57.665 47.619 0.00 0.00 0.00 3.06
1676 1805 5.435686 TTATGGGAGCTTAGTTGTGACAT 57.564 39.130 0.00 0.00 0.00 3.06
1677 1806 4.901197 TTATGGGAGCTTAGTTGTGACA 57.099 40.909 0.00 0.00 0.00 3.58
1678 1807 9.726438 ATATATTTATGGGAGCTTAGTTGTGAC 57.274 33.333 0.00 0.00 0.00 3.67
1687 1816 9.401058 GACTGCATTATATATTTATGGGAGCTT 57.599 33.333 0.00 0.00 0.00 3.74
1688 1817 8.551440 TGACTGCATTATATATTTATGGGAGCT 58.449 33.333 0.00 0.00 0.00 4.09
1689 1818 8.737168 TGACTGCATTATATATTTATGGGAGC 57.263 34.615 0.00 0.00 0.00 4.70
1737 1866 7.552687 TGTCCACTCTATTTGCGATCTATTTTT 59.447 33.333 0.00 0.00 0.00 1.94
1738 1867 7.047891 TGTCCACTCTATTTGCGATCTATTTT 58.952 34.615 0.00 0.00 0.00 1.82
1739 1868 6.582636 TGTCCACTCTATTTGCGATCTATTT 58.417 36.000 0.00 0.00 0.00 1.40
1740 1869 6.161855 TGTCCACTCTATTTGCGATCTATT 57.838 37.500 0.00 0.00 0.00 1.73
1741 1870 5.791336 TGTCCACTCTATTTGCGATCTAT 57.209 39.130 0.00 0.00 0.00 1.98
1742 1871 5.791336 ATGTCCACTCTATTTGCGATCTA 57.209 39.130 0.00 0.00 0.00 1.98
1743 1872 4.679373 ATGTCCACTCTATTTGCGATCT 57.321 40.909 0.00 0.00 0.00 2.75
1744 1873 7.426929 AATAATGTCCACTCTATTTGCGATC 57.573 36.000 0.00 0.00 0.00 3.69
1745 1874 7.807977 AAATAATGTCCACTCTATTTGCGAT 57.192 32.000 0.00 0.00 0.00 4.58
1746 1875 7.624360 AAAATAATGTCCACTCTATTTGCGA 57.376 32.000 0.00 0.00 0.00 5.10
1747 1876 8.826710 TCTAAAATAATGTCCACTCTATTTGCG 58.173 33.333 0.00 0.00 0.00 4.85
1753 1882 9.817809 GTCACATCTAAAATAATGTCCACTCTA 57.182 33.333 0.00 0.00 33.92 2.43
1754 1883 8.321353 TGTCACATCTAAAATAATGTCCACTCT 58.679 33.333 0.00 0.00 33.92 3.24
1755 1884 8.492673 TGTCACATCTAAAATAATGTCCACTC 57.507 34.615 0.00 0.00 33.92 3.51
1792 1921 6.151985 GGGTCTGTATAGGACACATCTAGATG 59.848 46.154 27.63 27.63 44.15 2.90
1793 1922 6.046168 AGGGTCTGTATAGGACACATCTAGAT 59.954 42.308 0.00 0.00 39.36 1.98
1794 1923 5.372959 AGGGTCTGTATAGGACACATCTAGA 59.627 44.000 9.73 0.00 39.36 2.43
1795 1924 5.636123 AGGGTCTGTATAGGACACATCTAG 58.364 45.833 9.73 0.00 39.36 2.43
1796 1925 5.664815 AGGGTCTGTATAGGACACATCTA 57.335 43.478 9.73 0.00 39.36 1.98
1797 1926 4.544564 AGGGTCTGTATAGGACACATCT 57.455 45.455 9.73 0.47 39.36 2.90
1798 1927 5.615925 AAAGGGTCTGTATAGGACACATC 57.384 43.478 9.73 0.00 39.36 3.06
1799 1928 5.726793 AGAAAAGGGTCTGTATAGGACACAT 59.273 40.000 9.73 0.00 39.36 3.21
1800 1929 5.091552 AGAAAAGGGTCTGTATAGGACACA 58.908 41.667 9.73 0.00 39.36 3.72
1801 1930 5.678955 AGAAAAGGGTCTGTATAGGACAC 57.321 43.478 7.72 4.58 37.38 3.67
1802 1931 6.697641 AAAGAAAAGGGTCTGTATAGGACA 57.302 37.500 7.72 0.00 35.61 4.02
1803 1932 7.652507 CGATAAAGAAAAGGGTCTGTATAGGAC 59.347 40.741 0.00 0.00 29.63 3.85
1804 1933 7.343833 ACGATAAAGAAAAGGGTCTGTATAGGA 59.656 37.037 0.00 0.00 29.63 2.94
1805 1934 7.438459 CACGATAAAGAAAAGGGTCTGTATAGG 59.562 40.741 0.00 0.00 29.63 2.57
1806 1935 7.980099 ACACGATAAAGAAAAGGGTCTGTATAG 59.020 37.037 0.00 0.00 29.63 1.31
1807 1936 7.844009 ACACGATAAAGAAAAGGGTCTGTATA 58.156 34.615 0.00 0.00 29.63 1.47
1808 1937 6.708285 ACACGATAAAGAAAAGGGTCTGTAT 58.292 36.000 0.00 0.00 31.76 2.29
1809 1938 6.105397 ACACGATAAAGAAAAGGGTCTGTA 57.895 37.500 0.00 0.00 0.00 2.74
1810 1939 4.969484 ACACGATAAAGAAAAGGGTCTGT 58.031 39.130 0.00 0.00 0.00 3.41
1811 1940 4.994852 TGACACGATAAAGAAAAGGGTCTG 59.005 41.667 0.00 0.00 0.00 3.51
1812 1941 5.223449 TGACACGATAAAGAAAAGGGTCT 57.777 39.130 0.00 0.00 0.00 3.85
1813 1942 5.642063 TCATGACACGATAAAGAAAAGGGTC 59.358 40.000 0.00 0.00 0.00 4.46
1814 1943 5.556915 TCATGACACGATAAAGAAAAGGGT 58.443 37.500 0.00 0.00 0.00 4.34
1815 1944 6.494893 TTCATGACACGATAAAGAAAAGGG 57.505 37.500 0.00 0.00 0.00 3.95
1816 1945 8.454106 AGATTTCATGACACGATAAAGAAAAGG 58.546 33.333 0.00 0.00 0.00 3.11
1844 1973 8.356533 CATTTTAAAATGTCACTTTGAGCACT 57.643 30.769 26.14 0.00 40.61 4.40
1880 2010 8.714906 CCTATTCACTCTATTAAAAAGGGAGGA 58.285 37.037 0.00 0.00 0.00 3.71
1881 2011 8.714906 TCCTATTCACTCTATTAAAAAGGGAGG 58.285 37.037 0.00 0.00 0.00 4.30
1882 2012 9.771534 CTCCTATTCACTCTATTAAAAAGGGAG 57.228 37.037 0.00 0.00 0.00 4.30
1883 2013 9.280456 ACTCCTATTCACTCTATTAAAAAGGGA 57.720 33.333 0.00 0.00 0.00 4.20
1904 2034 7.832187 GCATGAGTCCTCTATATACTTACTCCT 59.168 40.741 0.00 0.00 32.75 3.69
1990 2120 8.629158 TGGATTTCGCTACTAAATTGCATAAAT 58.371 29.630 0.00 0.00 31.53 1.40
1991 2121 7.990917 TGGATTTCGCTACTAAATTGCATAAA 58.009 30.769 0.00 0.00 0.00 1.40
1992 2122 7.561021 TGGATTTCGCTACTAAATTGCATAA 57.439 32.000 0.00 0.00 0.00 1.90
2001 2131 4.481368 ACACCATGGATTTCGCTACTAA 57.519 40.909 21.47 0.00 0.00 2.24
2002 2132 4.481368 AACACCATGGATTTCGCTACTA 57.519 40.909 21.47 0.00 0.00 1.82
2006 2136 1.067635 GCAAACACCATGGATTTCGCT 60.068 47.619 21.47 0.00 0.00 4.93
2013 2143 0.895100 GAGCCTGCAAACACCATGGA 60.895 55.000 21.47 0.00 0.00 3.41
2038 2171 2.496899 AGATGGTCAGCCGAACAAAT 57.503 45.000 0.00 0.00 43.66 2.32
2048 2181 1.728971 GAACAGCACGAAGATGGTCAG 59.271 52.381 10.19 0.00 30.84 3.51
2081 2214 2.447244 ACTGTAAGAGCAGTGCTGAC 57.553 50.000 25.35 17.39 46.72 3.51
2096 2229 2.125912 GCCGTCGCTGATCACTGT 60.126 61.111 0.00 0.00 0.00 3.55
2098 2231 2.125912 GTGCCGTCGCTGATCACT 60.126 61.111 0.00 0.00 35.36 3.41
2099 2232 2.027073 TTGTGCCGTCGCTGATCAC 61.027 57.895 0.00 0.00 35.36 3.06
2124 2257 0.448990 CATGGTCCACATTGCACGAG 59.551 55.000 0.00 0.00 37.84 4.18
2250 2383 0.468226 TACATCCATGGTCGGAAGCC 59.532 55.000 12.58 0.00 38.95 4.35
2269 2402 1.613255 GGATCGGTGGTGGTGACAAAT 60.613 52.381 0.00 0.00 46.06 2.32
2272 2405 2.589157 GGGATCGGTGGTGGTGACA 61.589 63.158 0.00 0.00 38.70 3.58
2282 2415 2.128507 GCTCCTTCTCGGGATCGGT 61.129 63.158 0.00 0.00 34.56 4.69
2431 2564 1.669115 CACCCACAGTCTGGCGAAG 60.669 63.158 4.53 0.00 39.01 3.79
2649 2782 4.799473 CGCGCGACCATTGCTGTG 62.799 66.667 28.94 0.00 0.00 3.66
2678 2811 2.198827 TCAACAACTCCGGCATGATT 57.801 45.000 0.00 0.00 0.00 2.57
2776 2909 1.007038 GTACACGACCGCTGGAACA 60.007 57.895 1.50 0.00 0.00 3.18
3269 3402 2.325082 CCGACCGGTTCAAGCCAAG 61.325 63.158 9.42 0.00 0.00 3.61
3271 3404 3.234630 CTCCGACCGGTTCAAGCCA 62.235 63.158 9.42 0.00 36.47 4.75
3272 3405 2.434359 CTCCGACCGGTTCAAGCC 60.434 66.667 9.42 0.00 36.47 4.35
3273 3406 3.119096 GCTCCGACCGGTTCAAGC 61.119 66.667 9.42 14.34 36.47 4.01
3301 3434 2.096442 GCGCGGCGGTTTAGTAGTT 61.096 57.895 25.03 0.00 0.00 2.24
3355 3488 1.080705 GTAGCCGCACGAGACAAGT 60.081 57.895 0.00 0.00 0.00 3.16
3421 3554 2.574955 GGCCACGTCCTCTGTCACT 61.575 63.158 0.00 0.00 0.00 3.41
3682 3815 1.398958 GGAGGCAGTAGAGCAGGAGG 61.399 65.000 0.00 0.00 35.83 4.30
3737 3870 2.883253 GACTGAGAAGGCGCTCGC 60.883 66.667 7.64 5.60 37.73 5.03
3771 3904 0.109781 CACAAAGCCCATGTACGTGC 60.110 55.000 9.72 0.00 0.00 5.34
3836 3969 2.888534 CGTTATGCCCGACCACCG 60.889 66.667 0.00 0.00 38.18 4.94
3944 4077 1.530891 CTATCTCCTTCCCCGCCGA 60.531 63.158 0.00 0.00 0.00 5.54
3964 4097 0.514691 GCTTGGACGTCAGCTTGAAG 59.485 55.000 18.91 9.55 32.10 3.02
4018 4155 0.798771 CGTACAGCTCTGCGAACCTC 60.799 60.000 0.00 0.00 0.00 3.85
4243 4380 1.313812 ACCCTACGACGAGCAAGAGG 61.314 60.000 0.00 0.00 0.00 3.69
4260 4397 7.907214 AAACATAGTGATAGAACTGTGAACC 57.093 36.000 7.90 0.00 40.61 3.62
4409 4553 4.524053 TGTGTCTAGTCACATCCGTATCT 58.476 43.478 17.27 0.00 42.36 1.98
4450 4594 9.350357 GTTGTCTTACATTTGTCTAGATACGAA 57.650 33.333 0.00 0.00 0.00 3.85
4452 4596 8.912787 AGTTGTCTTACATTTGTCTAGATACG 57.087 34.615 0.00 0.00 0.00 3.06
4483 4630 9.046296 CAGTTAACTTCAGAATTACACAGTCTT 57.954 33.333 5.07 0.00 0.00 3.01
4487 4634 7.072030 GTGCAGTTAACTTCAGAATTACACAG 58.928 38.462 8.27 0.00 0.00 3.66
4488 4635 6.292649 CGTGCAGTTAACTTCAGAATTACACA 60.293 38.462 8.27 0.00 0.00 3.72
4490 4637 5.756347 ACGTGCAGTTAACTTCAGAATTACA 59.244 36.000 8.27 0.00 0.00 2.41
4497 4645 2.612212 ACCAACGTGCAGTTAACTTCAG 59.388 45.455 8.27 5.83 42.02 3.02
4507 4655 3.190327 TCCAATTTGATACCAACGTGCAG 59.810 43.478 0.00 0.00 30.88 4.41
4512 4660 7.786178 TTCTATCTCCAATTTGATACCAACG 57.214 36.000 0.00 0.00 30.88 4.10
4523 4671 7.745717 TCCAATCCGTTATTCTATCTCCAATT 58.254 34.615 0.00 0.00 0.00 2.32
4525 4673 6.740944 TCCAATCCGTTATTCTATCTCCAA 57.259 37.500 0.00 0.00 0.00 3.53
4527 4675 5.932883 GGTTCCAATCCGTTATTCTATCTCC 59.067 44.000 0.00 0.00 0.00 3.71
4532 4680 5.687166 AGTGGTTCCAATCCGTTATTCTA 57.313 39.130 0.00 0.00 0.00 2.10
4533 4681 4.569719 AGTGGTTCCAATCCGTTATTCT 57.430 40.909 0.00 0.00 0.00 2.40
4534 4682 5.048294 ACAAAGTGGTTCCAATCCGTTATTC 60.048 40.000 0.00 0.00 0.00 1.75
4535 4683 4.830600 ACAAAGTGGTTCCAATCCGTTATT 59.169 37.500 0.00 0.00 0.00 1.40
4536 4684 4.403734 ACAAAGTGGTTCCAATCCGTTAT 58.596 39.130 0.00 0.00 0.00 1.89
4537 4685 3.822940 ACAAAGTGGTTCCAATCCGTTA 58.177 40.909 0.00 0.00 0.00 3.18
4569 5048 1.496429 CTCCCCCAGATTTGCCACTAT 59.504 52.381 0.00 0.00 0.00 2.12
4574 5053 0.259938 ATGACTCCCCCAGATTTGCC 59.740 55.000 0.00 0.00 0.00 4.52
4579 5058 6.091076 TCAATTTTTATGACTCCCCCAGAT 57.909 37.500 0.00 0.00 0.00 2.90
4587 5066 8.279103 CGAGGATTAGCTCAATTTTTATGACTC 58.721 37.037 0.00 0.00 0.00 3.36
4590 5069 9.778741 ATACGAGGATTAGCTCAATTTTTATGA 57.221 29.630 0.00 0.00 0.00 2.15
4608 5088 4.871557 CGTCAAAATGGGTTTATACGAGGA 59.128 41.667 0.00 0.00 37.58 3.71
4631 5111 1.890174 CCCGGCTTGTCATTTTCCC 59.110 57.895 0.00 0.00 0.00 3.97
4661 5141 4.229876 GCTTCTGCAAAAACATCAGTACC 58.770 43.478 0.00 0.00 39.41 3.34
4669 5149 0.398381 AGGGGGCTTCTGCAAAAACA 60.398 50.000 0.00 0.00 41.91 2.83
4670 5150 0.758734 AAGGGGGCTTCTGCAAAAAC 59.241 50.000 0.00 0.00 41.91 2.43
4675 5155 3.583380 AGCAAGGGGGCTTCTGCA 61.583 61.111 0.00 0.00 42.71 4.41
4682 5162 4.651962 TGGTTAAATATAAAGCAAGGGGGC 59.348 41.667 1.31 0.00 31.82 5.80
4683 5163 6.741240 GCATGGTTAAATATAAAGCAAGGGGG 60.741 42.308 6.68 0.00 37.81 5.40
4690 5171 6.292114 GGCGTTTGCATGGTTAAATATAAAGC 60.292 38.462 0.00 0.00 45.35 3.51
4703 5184 0.600557 TAACAAGGGCGTTTGCATGG 59.399 50.000 0.00 0.00 45.35 3.66
4706 5187 0.821711 AGCTAACAAGGGCGTTTGCA 60.822 50.000 11.61 0.00 45.96 4.08
4708 5189 3.907894 TTAAGCTAACAAGGGCGTTTG 57.092 42.857 0.00 0.00 0.00 2.93
4711 5192 3.215975 TGTTTTAAGCTAACAAGGGCGT 58.784 40.909 0.00 0.00 32.89 5.68
4712 5193 3.907894 TGTTTTAAGCTAACAAGGGCG 57.092 42.857 0.00 0.00 32.89 6.13
4717 5198 8.404107 AGAATAGCCTTGTTTTAAGCTAACAA 57.596 30.769 11.71 11.71 40.92 2.83
4718 5199 7.120726 GGAGAATAGCCTTGTTTTAAGCTAACA 59.879 37.037 0.00 0.00 40.92 2.41
4719 5200 7.337184 AGGAGAATAGCCTTGTTTTAAGCTAAC 59.663 37.037 0.00 0.00 40.92 2.34
4722 5203 5.821097 AGGAGAATAGCCTTGTTTTAAGCT 58.179 37.500 0.00 0.00 39.37 3.74
4723 5204 6.516739 AAGGAGAATAGCCTTGTTTTAAGC 57.483 37.500 0.00 0.00 43.84 3.09
4742 5223 4.097135 TGCGTCAAAGTCAAAAATCAAGGA 59.903 37.500 0.00 0.00 0.00 3.36
4748 5229 5.142635 GCTTTTGCGTCAAAGTCAAAAAT 57.857 34.783 9.37 0.00 38.65 1.82
4795 5282 2.124942 CCAAAGGAGGCGAGCTCC 60.125 66.667 8.47 0.47 41.15 4.70
4796 5283 2.821810 GCCAAAGGAGGCGAGCTC 60.822 66.667 2.73 2.73 46.12 4.09
4848 5335 1.210722 GAACATGAGGAAGGGGGAGTC 59.789 57.143 0.00 0.00 0.00 3.36
4849 5336 1.290134 GAACATGAGGAAGGGGGAGT 58.710 55.000 0.00 0.00 0.00 3.85
4863 5350 3.010696 GGAGGAGGAAAAGGAAGGAACAT 59.989 47.826 0.00 0.00 0.00 2.71
4873 5360 2.260822 TGGAGTGAGGAGGAGGAAAAG 58.739 52.381 0.00 0.00 0.00 2.27
4876 5363 1.150135 ACTTGGAGTGAGGAGGAGGAA 59.850 52.381 0.00 0.00 0.00 3.36
4892 5383 5.139727 AGAGACAGGGAGATGAGATACTTG 58.860 45.833 0.00 0.00 0.00 3.16
4893 5384 5.134339 AGAGAGACAGGGAGATGAGATACTT 59.866 44.000 0.00 0.00 0.00 2.24
4894 5385 4.665009 AGAGAGACAGGGAGATGAGATACT 59.335 45.833 0.00 0.00 0.00 2.12
4905 5396 2.604912 TGCACTAAGAGAGACAGGGA 57.395 50.000 0.00 0.00 0.00 4.20
4908 5399 4.021544 AGGTTCTTGCACTAAGAGAGACAG 60.022 45.833 0.00 0.00 45.66 3.51
4915 5406 3.307691 CCATGGAGGTTCTTGCACTAAGA 60.308 47.826 5.56 0.00 43.53 2.10
4918 5409 2.027192 GTCCATGGAGGTTCTTGCACTA 60.027 50.000 16.81 0.00 39.02 2.74
4919 5410 1.067295 TCCATGGAGGTTCTTGCACT 58.933 50.000 11.44 0.00 39.02 4.40
4921 5412 0.321564 CGTCCATGGAGGTTCTTGCA 60.322 55.000 23.58 0.00 39.02 4.08
4925 5416 1.002087 GTGTTCGTCCATGGAGGTTCT 59.998 52.381 28.76 0.00 39.02 3.01
4957 5448 4.498520 ACGTCCAGATCGGCTGCG 62.499 66.667 0.00 3.57 43.50 5.18
4960 5451 2.750637 ACGACGTCCAGATCGGCT 60.751 61.111 10.58 0.00 42.67 5.52
5014 5505 2.436109 CGGATTAGGCCATGGGGG 59.564 66.667 15.13 0.00 40.85 5.40
5015 5506 2.282462 GCGGATTAGGCCATGGGG 60.282 66.667 15.13 0.00 37.18 4.96
5022 5513 0.108585 TGAGAATGGGCGGATTAGGC 59.891 55.000 0.00 0.00 0.00 3.93
5023 5514 1.417890 AGTGAGAATGGGCGGATTAGG 59.582 52.381 0.00 0.00 0.00 2.69
5024 5515 2.487934 CAGTGAGAATGGGCGGATTAG 58.512 52.381 0.00 0.00 0.00 1.73
5025 5516 1.475034 GCAGTGAGAATGGGCGGATTA 60.475 52.381 0.00 0.00 0.00 1.75
5026 5517 0.749454 GCAGTGAGAATGGGCGGATT 60.749 55.000 0.00 0.00 0.00 3.01
5027 5518 1.153086 GCAGTGAGAATGGGCGGAT 60.153 57.895 0.00 0.00 0.00 4.18
5028 5519 2.268920 GCAGTGAGAATGGGCGGA 59.731 61.111 0.00 0.00 0.00 5.54
5029 5520 2.825836 GGCAGTGAGAATGGGCGG 60.826 66.667 0.00 0.00 0.00 6.13
5030 5521 2.825836 GGGCAGTGAGAATGGGCG 60.826 66.667 0.00 0.00 0.00 6.13
5031 5522 2.825836 CGGGCAGTGAGAATGGGC 60.826 66.667 0.00 0.00 0.00 5.36
5032 5523 2.825836 GCGGGCAGTGAGAATGGG 60.826 66.667 0.00 0.00 0.00 4.00
5033 5524 2.046023 TGCGGGCAGTGAGAATGG 60.046 61.111 0.00 0.00 0.00 3.16
5034 5525 2.758089 GCTGCGGGCAGTGAGAATG 61.758 63.158 20.66 0.00 45.24 2.67
5035 5526 2.437359 GCTGCGGGCAGTGAGAAT 60.437 61.111 20.66 0.00 45.24 2.40
5036 5527 3.596066 GAGCTGCGGGCAGTGAGAA 62.596 63.158 20.66 0.00 45.24 2.87
5037 5528 4.074526 GAGCTGCGGGCAGTGAGA 62.075 66.667 20.66 0.00 45.24 3.27
5038 5529 4.079850 AGAGCTGCGGGCAGTGAG 62.080 66.667 20.66 0.00 45.24 3.51
5039 5530 4.074526 GAGAGCTGCGGGCAGTGA 62.075 66.667 20.66 0.00 45.24 3.41
5042 5533 4.527583 GAGGAGAGCTGCGGGCAG 62.528 72.222 16.09 16.09 46.15 4.85
5045 5536 3.535962 GAGGAGGAGAGCTGCGGG 61.536 72.222 0.00 0.00 0.00 6.13
5046 5537 2.354401 TTGAGGAGGAGAGCTGCGG 61.354 63.158 0.00 0.00 0.00 5.69
5047 5538 1.153667 GTTGAGGAGGAGAGCTGCG 60.154 63.158 0.00 0.00 0.00 5.18
5048 5539 1.136110 GTAGTTGAGGAGGAGAGCTGC 59.864 57.143 0.00 0.00 0.00 5.25
5049 5540 1.754226 GGTAGTTGAGGAGGAGAGCTG 59.246 57.143 0.00 0.00 0.00 4.24
5050 5541 1.683629 CGGTAGTTGAGGAGGAGAGCT 60.684 57.143 0.00 0.00 0.00 4.09
5051 5542 0.741915 CGGTAGTTGAGGAGGAGAGC 59.258 60.000 0.00 0.00 0.00 4.09
5052 5543 0.741915 GCGGTAGTTGAGGAGGAGAG 59.258 60.000 0.00 0.00 0.00 3.20
5091 5845 1.635663 CGACCGAACAATGACCAGGC 61.636 60.000 0.00 0.00 0.00 4.85
5101 5855 2.034939 TCTTCTTTAGCACGACCGAACA 59.965 45.455 0.00 0.00 0.00 3.18
5107 5861 3.499048 TCATCGTCTTCTTTAGCACGAC 58.501 45.455 0.00 0.00 38.38 4.34
5111 5865 2.666508 GCGTTCATCGTCTTCTTTAGCA 59.333 45.455 0.00 0.00 42.13 3.49
5119 5873 1.079127 CAGGGGCGTTCATCGTCTT 60.079 57.895 0.00 0.00 44.25 3.01
5159 5913 4.271776 CCCGGATTAAAACTAAGCTAACCG 59.728 45.833 0.73 0.00 37.02 4.44
5164 5918 3.292492 CCCCCGGATTAAAACTAAGCT 57.708 47.619 0.73 0.00 0.00 3.74
5188 5942 3.428282 CTTTACACGTGCGCCCCC 61.428 66.667 17.22 0.00 0.00 5.40
5194 5948 1.191647 CGAGTCCAACTTTACACGTGC 59.808 52.381 17.22 0.00 0.00 5.34
5195 5949 1.191647 GCGAGTCCAACTTTACACGTG 59.808 52.381 15.48 15.48 33.16 4.49
5202 5956 3.614399 CTCAGGCGAGTCCAACTTT 57.386 52.632 0.00 0.00 37.29 2.66
5225 5979 3.656045 CCGTGGGCCGTGTCAAAC 61.656 66.667 0.00 0.00 33.66 2.93
5250 6004 9.849166 ACCCACTTGTTTTATATTTAAATCACG 57.151 29.630 3.39 0.00 30.47 4.35
5272 6026 5.047660 GGCATGTTGTATTACAGAAAACCCA 60.048 40.000 0.00 0.00 0.00 4.51
5279 6033 4.568072 ACCTGGCATGTTGTATTACAGA 57.432 40.909 0.00 0.00 0.00 3.41
5282 6036 4.743493 CCAAACCTGGCATGTTGTATTAC 58.257 43.478 8.95 0.00 35.39 1.89
5284 6038 3.959535 CCAAACCTGGCATGTTGTATT 57.040 42.857 8.95 0.00 35.39 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.