Multiple sequence alignment - TraesCS5D01G491800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G491800 chr5D 100.000 2488 0 0 1 2488 525390713 525393200 0.000000e+00 4595.0
1 TraesCS5D01G491800 chr5D 96.310 271 10 0 2218 2488 390366816 390366546 1.760000e-121 446.0
2 TraesCS5D01G491800 chr5D 100.000 53 0 0 1 53 23873307 23873359 5.660000e-17 99.0
3 TraesCS5D01G491800 chr5D 83.951 81 9 3 1495 1572 190473937 190474016 9.540000e-10 75.0
4 TraesCS5D01G491800 chr5A 93.583 561 23 9 943 1490 651795094 651795654 0.000000e+00 824.0
5 TraesCS5D01G491800 chr5A 82.088 977 97 36 4 950 651792471 651793399 0.000000e+00 763.0
6 TraesCS5D01G491800 chr5A 91.870 369 23 6 1636 2003 651795731 651796093 2.210000e-140 508.0
7 TraesCS5D01G491800 chr5B 90.435 460 25 10 1573 2019 659762553 659763006 2.760000e-164 588.0
8 TraesCS5D01G491800 chr5B 86.803 538 49 16 2 529 659759521 659760046 4.610000e-162 580.0
9 TraesCS5D01G491800 chr5B 89.819 442 29 11 1073 1502 659762103 659762540 1.010000e-153 553.0
10 TraesCS5D01G491800 chr5B 86.563 387 26 7 708 1083 659761407 659761778 1.070000e-108 403.0
11 TraesCS5D01G491800 chr5B 86.486 74 6 3 1501 1572 705275956 705275885 7.380000e-11 78.7
12 TraesCS5D01G491800 chr5B 94.444 36 2 0 2038 2073 450613493 450613528 3.460000e-04 56.5
13 TraesCS5D01G491800 chr6D 97.048 271 8 0 2218 2488 147646485 147646755 8.110000e-125 457.0
14 TraesCS5D01G491800 chr6D 97.037 270 7 1 2217 2486 392794924 392794656 1.050000e-123 453.0
15 TraesCS5D01G491800 chr6D 85.882 85 8 3 1494 1574 42512921 42512837 1.230000e-13 87.9
16 TraesCS5D01G491800 chr6D 100.000 29 0 0 2043 2071 156434735 156434707 1.000000e-03 54.7
17 TraesCS5D01G491800 chr1D 97.398 269 6 1 2217 2485 439468260 439468527 8.110000e-125 457.0
18 TraesCS5D01G491800 chr1D 96.679 271 8 1 2218 2488 452240035 452239766 1.360000e-122 449.0
19 TraesCS5D01G491800 chr3D 96.691 272 9 0 2217 2488 566073599 566073328 1.050000e-123 453.0
20 TraesCS5D01G491800 chr3D 86.420 81 9 1 1494 1572 33368858 33368778 1.230000e-13 87.9
21 TraesCS5D01G491800 chr7D 96.667 270 7 2 2219 2488 388131009 388131276 4.880000e-122 448.0
22 TraesCS5D01G491800 chr7D 86.420 81 9 1 1494 1572 168058944 168059024 1.230000e-13 87.9
23 TraesCS5D01G491800 chr7D 93.617 47 1 2 1537 1583 402153028 402152984 4.440000e-08 69.4
24 TraesCS5D01G491800 chr2D 96.654 269 9 0 2220 2488 36546702 36546970 4.880000e-122 448.0
25 TraesCS5D01G491800 chr2D 95.699 279 9 2 2210 2488 160319635 160319910 1.760000e-121 446.0
26 TraesCS5D01G491800 chr2D 84.615 78 10 1 1494 1569 212002627 212002704 2.650000e-10 76.8
27 TraesCS5D01G491800 chr3A 90.751 173 14 1 2038 2208 457703044 457703216 1.920000e-56 230.0
28 TraesCS5D01G491800 chr3A 93.333 135 8 1 2074 2208 741160544 741160677 5.430000e-47 198.0
29 TraesCS5D01G491800 chr3A 91.176 136 7 1 2073 2208 514519065 514518935 1.970000e-41 180.0
30 TraesCS5D01G491800 chr7A 77.670 309 63 5 1185 1490 80988489 80988184 1.520000e-42 183.0
31 TraesCS5D01G491800 chr1B 90.551 127 10 1 2084 2208 600256818 600256692 1.530000e-37 167.0
32 TraesCS5D01G491800 chr2A 86.747 83 7 3 1494 1572 398656541 398656623 3.410000e-14 89.8
33 TraesCS5D01G491800 chr6B 86.250 80 7 3 1497 1572 719773008 719772929 1.590000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G491800 chr5D 525390713 525393200 2487 False 4595.000000 4595 100.000000 1 2488 1 chr5D.!!$F3 2487
1 TraesCS5D01G491800 chr5A 651792471 651796093 3622 False 698.333333 824 89.180333 4 2003 3 chr5A.!!$F1 1999
2 TraesCS5D01G491800 chr5B 659759521 659763006 3485 False 531.000000 588 88.405000 2 2019 4 chr5B.!!$F2 2017

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
351 375 0.174845 CATCGAACCAGGTCGGCTTA 59.825 55.0 5.1 0.0 41.43 3.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1810 5141 0.030101 GCCAACAAGCTTACACGCAA 59.97 50.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 96 4.345837 CCATACGTCCCCTATAACCAAGAA 59.654 45.833 0.00 0.00 0.00 2.52
96 97 3.900966 ACGTCCCCTATAACCAAGAAC 57.099 47.619 0.00 0.00 0.00 3.01
120 121 4.621991 GAAATAGGCTCTCAATCACGCTA 58.378 43.478 0.00 0.00 0.00 4.26
126 127 2.898705 CTCTCAATCACGCTAAAGGCT 58.101 47.619 0.00 0.00 39.13 4.58
187 188 2.094675 GGTCAAATGATCCACCACCAG 58.905 52.381 0.00 0.00 0.00 4.00
190 191 1.894466 CAAATGATCCACCACCAGCAA 59.106 47.619 0.00 0.00 0.00 3.91
327 351 0.880278 GCAAGTTCACGAGCTCACCA 60.880 55.000 15.40 0.00 0.00 4.17
341 365 3.632080 ACCACCGCCATCGAACCA 61.632 61.111 0.00 0.00 38.10 3.67
342 366 2.819595 CCACCGCCATCGAACCAG 60.820 66.667 0.00 0.00 38.10 4.00
344 368 3.319198 ACCGCCATCGAACCAGGT 61.319 61.111 0.00 0.00 38.10 4.00
347 371 2.511600 GCCATCGAACCAGGTCGG 60.512 66.667 5.10 0.00 41.43 4.79
348 372 2.511600 CCATCGAACCAGGTCGGC 60.512 66.667 5.10 0.00 41.43 5.54
349 373 2.579201 CATCGAACCAGGTCGGCT 59.421 61.111 5.10 0.00 41.43 5.52
350 374 1.079127 CATCGAACCAGGTCGGCTT 60.079 57.895 5.10 0.00 41.43 4.35
351 375 0.174845 CATCGAACCAGGTCGGCTTA 59.825 55.000 5.10 0.00 41.43 3.09
352 376 0.460311 ATCGAACCAGGTCGGCTTAG 59.540 55.000 5.10 0.00 41.43 2.18
353 377 1.810030 CGAACCAGGTCGGCTTAGC 60.810 63.158 0.00 0.00 39.03 3.09
354 378 1.449778 GAACCAGGTCGGCTTAGCC 60.450 63.158 14.22 14.22 46.75 3.93
457 482 2.610374 GAGCGACGTGGGCATTTTATTA 59.390 45.455 10.45 0.00 0.00 0.98
467 492 7.871463 ACGTGGGCATTTTATTATCTCTACTAC 59.129 37.037 0.00 0.00 0.00 2.73
502 527 2.780065 GCAAACACATGCAAGTCTCA 57.220 45.000 0.00 0.00 45.70 3.27
508 533 6.671190 CAAACACATGCAAGTCTCATTTAGA 58.329 36.000 0.00 0.00 0.00 2.10
530 555 3.834489 AATGGTGTGGCTAGATCTCAG 57.166 47.619 0.00 0.00 0.00 3.35
537 562 3.118371 TGTGGCTAGATCTCAGTCGACTA 60.118 47.826 19.57 2.81 0.00 2.59
542 567 5.472137 GGCTAGATCTCAGTCGACTAAAGAT 59.528 44.000 29.09 29.09 33.17 2.40
548 573 8.192110 AGATCTCAGTCGACTAAAGATTTAACC 58.808 37.037 29.20 20.82 31.65 2.85
554 579 6.872547 AGTCGACTAAAGATTTAACCAAGTCC 59.127 38.462 18.46 0.00 0.00 3.85
633 664 3.152341 AGGTGAATGAAGTGCTTTCCTG 58.848 45.455 0.00 0.00 34.77 3.86
661 692 8.854614 ACAAAGAATATATCCTACATTGGAGC 57.145 34.615 0.00 0.00 39.78 4.70
672 703 1.089920 CATTGGAGCAGTGCACCTAC 58.910 55.000 28.47 5.75 39.93 3.18
688 719 5.421056 TGCACCTACACCATATATAGCCTAC 59.579 44.000 0.00 0.00 0.00 3.18
757 2008 0.469705 TGATTTGGTGCTGGCCTTGT 60.470 50.000 3.32 0.00 0.00 3.16
758 2009 1.202989 TGATTTGGTGCTGGCCTTGTA 60.203 47.619 3.32 0.00 0.00 2.41
759 2010 2.102578 GATTTGGTGCTGGCCTTGTAT 58.897 47.619 3.32 0.00 0.00 2.29
760 2011 2.008242 TTTGGTGCTGGCCTTGTATT 57.992 45.000 3.32 0.00 0.00 1.89
761 2012 2.889170 TTGGTGCTGGCCTTGTATTA 57.111 45.000 3.32 0.00 0.00 0.98
762 2013 3.380471 TTGGTGCTGGCCTTGTATTAT 57.620 42.857 3.32 0.00 0.00 1.28
763 2014 4.511786 TTGGTGCTGGCCTTGTATTATA 57.488 40.909 3.32 0.00 0.00 0.98
764 2015 3.815809 TGGTGCTGGCCTTGTATTATAC 58.184 45.455 3.32 0.00 0.00 1.47
779 2030 9.608617 CTTGTATTATACTACATCAGGTACACG 57.391 37.037 3.99 0.00 31.94 4.49
788 2039 3.687698 ACATCAGGTACACGTTAAATGGC 59.312 43.478 0.00 0.00 0.00 4.40
810 2061 6.823689 TGGCTATCAATCTCTTTCCTTACAAC 59.176 38.462 0.00 0.00 0.00 3.32
811 2062 6.823689 GGCTATCAATCTCTTTCCTTACAACA 59.176 38.462 0.00 0.00 0.00 3.33
812 2063 7.011857 GGCTATCAATCTCTTTCCTTACAACAG 59.988 40.741 0.00 0.00 0.00 3.16
904 2161 1.760613 ACTTCCTCTGGTTCGTTGTCA 59.239 47.619 0.00 0.00 0.00 3.58
1007 3973 1.165270 GTAAACAGCGGCATGGACTT 58.835 50.000 1.45 0.00 0.00 3.01
1053 4020 4.797275 GCCTGCTTGTTCTTTTGCATTACT 60.797 41.667 0.00 0.00 34.79 2.24
1323 4640 2.349755 GCCCGGGCTTCAACTACA 59.650 61.111 38.76 0.00 38.26 2.74
1343 4660 1.371758 CATCGATGTCTACCCGGCG 60.372 63.158 17.50 0.00 0.00 6.46
1512 4829 8.074991 AGATCTTTATATAATACTCCCTCCCCC 58.925 40.741 0.00 0.00 0.00 5.40
1514 4831 7.559103 TCTTTATATAATACTCCCTCCCCCAA 58.441 38.462 0.00 0.00 0.00 4.12
1515 4832 8.026304 TCTTTATATAATACTCCCTCCCCCAAA 58.974 37.037 0.00 0.00 0.00 3.28
1516 4833 7.824365 TTATATAATACTCCCTCCCCCAAAG 57.176 40.000 0.00 0.00 0.00 2.77
1517 4834 2.378308 AATACTCCCTCCCCCAAAGT 57.622 50.000 0.00 0.00 0.00 2.66
1518 4835 2.378308 ATACTCCCTCCCCCAAAGTT 57.622 50.000 0.00 0.00 0.00 2.66
1519 4836 1.665137 TACTCCCTCCCCCAAAGTTC 58.335 55.000 0.00 0.00 0.00 3.01
1520 4837 0.103876 ACTCCCTCCCCCAAAGTTCT 60.104 55.000 0.00 0.00 0.00 3.01
1521 4838 1.076438 CTCCCTCCCCCAAAGTTCTT 58.924 55.000 0.00 0.00 0.00 2.52
1522 4839 0.777446 TCCCTCCCCCAAAGTTCTTG 59.223 55.000 0.00 0.00 0.00 3.02
1523 4840 0.777446 CCCTCCCCCAAAGTTCTTGA 59.223 55.000 0.00 0.00 0.00 3.02
1524 4841 1.359130 CCCTCCCCCAAAGTTCTTGAT 59.641 52.381 0.00 0.00 0.00 2.57
1525 4842 2.225369 CCCTCCCCCAAAGTTCTTGATT 60.225 50.000 0.00 0.00 0.00 2.57
1526 4843 3.510459 CCTCCCCCAAAGTTCTTGATTT 58.490 45.455 0.00 0.00 0.00 2.17
1527 4844 3.259123 CCTCCCCCAAAGTTCTTGATTTG 59.741 47.826 0.00 0.00 36.40 2.32
1528 4845 3.897505 CTCCCCCAAAGTTCTTGATTTGT 59.102 43.478 0.00 0.00 35.16 2.83
1529 4846 3.895041 TCCCCCAAAGTTCTTGATTTGTC 59.105 43.478 0.00 0.00 35.16 3.18
1530 4847 3.897505 CCCCCAAAGTTCTTGATTTGTCT 59.102 43.478 0.00 0.00 35.16 3.41
1531 4848 5.076873 CCCCCAAAGTTCTTGATTTGTCTA 58.923 41.667 0.00 0.00 35.16 2.59
1532 4849 5.538433 CCCCCAAAGTTCTTGATTTGTCTAA 59.462 40.000 0.00 0.00 35.16 2.10
1533 4850 6.041523 CCCCCAAAGTTCTTGATTTGTCTAAA 59.958 38.462 0.00 0.00 35.16 1.85
1534 4851 7.256296 CCCCCAAAGTTCTTGATTTGTCTAAAT 60.256 37.037 0.00 0.00 39.16 1.40
1535 4852 8.150296 CCCCAAAGTTCTTGATTTGTCTAAATT 58.850 33.333 0.00 0.00 36.66 1.82
1536 4853 9.546428 CCCAAAGTTCTTGATTTGTCTAAATTT 57.454 29.630 0.00 0.00 36.66 1.82
1563 4880 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
1564 4881 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
1565 4882 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
1566 4883 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
1567 4884 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
1568 4885 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
1569 4886 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
1570 4887 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
1571 4888 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
1575 4892 0.916809 ATTTTGGGACGGAGGGTAGG 59.083 55.000 0.00 0.00 0.00 3.18
1592 4909 6.151049 AGGGTAGGTGGTCTTATGATTGTAT 58.849 40.000 0.00 0.00 0.00 2.29
1603 4920 9.477484 GGTCTTATGATTGTATCGTAAATCTGT 57.523 33.333 0.00 0.00 39.51 3.41
1613 4930 8.610248 TGTATCGTAAATCTGTTTCCTTTGAA 57.390 30.769 0.00 0.00 0.00 2.69
1614 4931 9.226606 TGTATCGTAAATCTGTTTCCTTTGAAT 57.773 29.630 0.00 0.00 0.00 2.57
1683 5014 5.791336 AGGGATCAAACTCCTTGTTTTTC 57.209 39.130 0.00 0.00 45.69 2.29
1697 5028 5.580691 CCTTGTTTTTCCTGTCCTTTTTGAC 59.419 40.000 0.00 0.00 35.77 3.18
1715 5046 5.503662 TTGACGGAAAAAGAAACCCTTAC 57.496 39.130 0.00 0.00 34.00 2.34
1775 5106 6.747414 TGTATATGGTTCTTCATGGTAGCT 57.253 37.500 0.00 0.00 0.00 3.32
1791 5122 4.065088 GGTAGCTGAGTGTTGACAAATCA 58.935 43.478 0.00 0.00 0.00 2.57
1848 5179 7.399634 TGTTGGCTTAAAATTAGTAGTAGGCT 58.600 34.615 0.00 0.00 0.00 4.58
1964 5295 4.755266 TTAATGGTGGCTCTAACTCTCC 57.245 45.455 0.00 0.00 0.00 3.71
1984 5315 9.793259 ACTCTCCTCTAGATGAGAATTAGTTAG 57.207 37.037 23.02 13.90 45.39 2.34
1985 5316 8.630054 TCTCCTCTAGATGAGAATTAGTTAGC 57.370 38.462 21.35 0.00 45.39 3.09
1986 5317 7.389330 TCTCCTCTAGATGAGAATTAGTTAGCG 59.611 40.741 21.35 0.00 45.39 4.26
2043 5374 8.874744 AATAAGAAGAGAATTAGTTACGGAGC 57.125 34.615 0.00 0.00 0.00 4.70
2044 5375 6.532988 AAGAAGAGAATTAGTTACGGAGCT 57.467 37.500 0.00 0.00 0.00 4.09
2045 5376 5.897050 AGAAGAGAATTAGTTACGGAGCTG 58.103 41.667 0.00 0.00 0.00 4.24
2046 5377 4.048241 AGAGAATTAGTTACGGAGCTGC 57.952 45.455 0.00 0.00 0.00 5.25
2047 5378 3.702045 AGAGAATTAGTTACGGAGCTGCT 59.298 43.478 0.00 0.00 0.00 4.24
2048 5379 4.888239 AGAGAATTAGTTACGGAGCTGCTA 59.112 41.667 0.15 0.00 0.00 3.49
2049 5380 5.360144 AGAGAATTAGTTACGGAGCTGCTAA 59.640 40.000 0.15 0.00 0.00 3.09
2050 5381 5.974108 AGAATTAGTTACGGAGCTGCTAAA 58.026 37.500 0.15 0.00 0.00 1.85
2051 5382 6.583562 AGAATTAGTTACGGAGCTGCTAAAT 58.416 36.000 0.15 3.47 0.00 1.40
2052 5383 6.702282 AGAATTAGTTACGGAGCTGCTAAATC 59.298 38.462 0.15 0.00 0.00 2.17
2053 5384 5.593679 TTAGTTACGGAGCTGCTAAATCT 57.406 39.130 0.15 0.00 0.00 2.40
2054 5385 4.048241 AGTTACGGAGCTGCTAAATCTC 57.952 45.455 0.15 0.00 0.00 2.75
2055 5386 3.447586 AGTTACGGAGCTGCTAAATCTCA 59.552 43.478 0.15 0.00 0.00 3.27
2056 5387 2.593346 ACGGAGCTGCTAAATCTCAG 57.407 50.000 0.15 0.00 0.00 3.35
2057 5388 1.827969 ACGGAGCTGCTAAATCTCAGT 59.172 47.619 0.15 0.00 32.04 3.41
2058 5389 2.234908 ACGGAGCTGCTAAATCTCAGTT 59.765 45.455 0.15 0.00 32.79 3.16
2059 5390 2.606725 CGGAGCTGCTAAATCTCAGTTG 59.393 50.000 0.15 0.00 33.09 3.16
2060 5391 3.677148 CGGAGCTGCTAAATCTCAGTTGA 60.677 47.826 0.15 0.00 33.09 3.18
2061 5392 3.620821 GGAGCTGCTAAATCTCAGTTGAC 59.379 47.826 0.15 0.00 33.09 3.18
2062 5393 4.502962 GAGCTGCTAAATCTCAGTTGACT 58.497 43.478 0.15 0.00 33.09 3.41
2063 5394 4.252073 AGCTGCTAAATCTCAGTTGACTG 58.748 43.478 0.00 4.77 45.08 3.51
2073 5404 2.140065 CAGTTGACTGAGACTTCGCA 57.860 50.000 5.19 0.00 46.59 5.10
2074 5405 2.473816 CAGTTGACTGAGACTTCGCAA 58.526 47.619 5.19 0.00 46.59 4.85
2075 5406 2.866156 CAGTTGACTGAGACTTCGCAAA 59.134 45.455 5.19 0.00 46.59 3.68
2076 5407 3.060003 CAGTTGACTGAGACTTCGCAAAG 60.060 47.826 5.19 0.00 46.59 2.77
2077 5408 5.500311 CAGTTGACTGAGACTTCGCAAAGT 61.500 45.833 5.19 0.00 46.19 2.66
2086 5417 3.637998 ACTTCGCAAAGTCTTAGTCGA 57.362 42.857 0.00 0.00 42.10 4.20
2087 5418 3.306818 ACTTCGCAAAGTCTTAGTCGAC 58.693 45.455 7.70 7.70 42.10 4.20
2088 5419 1.959747 TCGCAAAGTCTTAGTCGACG 58.040 50.000 10.46 0.00 38.90 5.12
2089 5420 1.532437 TCGCAAAGTCTTAGTCGACGA 59.468 47.619 10.46 0.94 38.90 4.20
2090 5421 1.905687 CGCAAAGTCTTAGTCGACGAG 59.094 52.381 10.46 12.40 38.90 4.18
2091 5422 2.664971 CGCAAAGTCTTAGTCGACGAGT 60.665 50.000 10.46 10.54 38.90 4.18
2092 5423 2.909863 GCAAAGTCTTAGTCGACGAGTC 59.090 50.000 8.81 10.05 38.90 3.36
2093 5424 3.608707 GCAAAGTCTTAGTCGACGAGTCA 60.609 47.826 8.81 0.00 38.90 3.41
2094 5425 4.152526 CAAAGTCTTAGTCGACGAGTCAG 58.847 47.826 8.81 8.02 38.90 3.51
2095 5426 1.733360 AGTCTTAGTCGACGAGTCAGC 59.267 52.381 8.81 4.62 38.90 4.26
2096 5427 1.085091 TCTTAGTCGACGAGTCAGCC 58.915 55.000 8.81 0.00 0.00 4.85
2097 5428 0.247735 CTTAGTCGACGAGTCAGCCG 60.248 60.000 8.81 0.00 0.00 5.52
2098 5429 0.952497 TTAGTCGACGAGTCAGCCGT 60.952 55.000 8.81 0.00 43.56 5.68
2099 5430 0.952497 TAGTCGACGAGTCAGCCGTT 60.952 55.000 8.81 0.00 40.67 4.44
2100 5431 2.081212 GTCGACGAGTCAGCCGTTG 61.081 63.158 0.00 0.00 40.67 4.10
2101 5432 2.805353 CGACGAGTCAGCCGTTGG 60.805 66.667 4.02 0.00 40.67 3.77
2102 5433 2.649034 GACGAGTCAGCCGTTGGA 59.351 61.111 0.00 0.00 40.67 3.53
2103 5434 1.215647 GACGAGTCAGCCGTTGGAT 59.784 57.895 0.00 0.00 40.67 3.41
2104 5435 0.802607 GACGAGTCAGCCGTTGGATC 60.803 60.000 0.00 0.00 40.67 3.36
2105 5436 1.874019 CGAGTCAGCCGTTGGATCG 60.874 63.158 0.00 0.00 0.00 3.69
2106 5437 1.215647 GAGTCAGCCGTTGGATCGT 59.784 57.895 0.00 0.00 0.00 3.73
2107 5438 0.389948 GAGTCAGCCGTTGGATCGTT 60.390 55.000 0.00 0.00 0.00 3.85
2108 5439 0.034896 AGTCAGCCGTTGGATCGTTT 59.965 50.000 0.00 0.00 0.00 3.60
2109 5440 0.165944 GTCAGCCGTTGGATCGTTTG 59.834 55.000 0.00 0.00 0.00 2.93
2110 5441 0.250124 TCAGCCGTTGGATCGTTTGT 60.250 50.000 0.00 0.00 0.00 2.83
2111 5442 0.591170 CAGCCGTTGGATCGTTTGTT 59.409 50.000 0.00 0.00 0.00 2.83
2112 5443 0.872388 AGCCGTTGGATCGTTTGTTC 59.128 50.000 0.00 0.00 0.00 3.18
2113 5444 0.452122 GCCGTTGGATCGTTTGTTCG 60.452 55.000 0.00 0.00 0.00 3.95
2114 5445 0.452122 CCGTTGGATCGTTTGTTCGC 60.452 55.000 0.00 0.00 0.00 4.70
2115 5446 0.511221 CGTTGGATCGTTTGTTCGCT 59.489 50.000 0.00 0.00 0.00 4.93
2116 5447 1.722464 CGTTGGATCGTTTGTTCGCTA 59.278 47.619 0.00 0.00 0.00 4.26
2117 5448 2.471749 CGTTGGATCGTTTGTTCGCTAC 60.472 50.000 0.00 0.00 0.00 3.58
2118 5449 2.442212 TGGATCGTTTGTTCGCTACA 57.558 45.000 0.00 0.00 34.12 2.74
2119 5450 2.756829 TGGATCGTTTGTTCGCTACAA 58.243 42.857 0.00 0.00 44.81 2.41
2120 5451 2.734606 TGGATCGTTTGTTCGCTACAAG 59.265 45.455 3.70 0.00 46.81 3.16
2121 5452 2.991190 GGATCGTTTGTTCGCTACAAGA 59.009 45.455 3.70 0.70 46.81 3.02
2122 5453 3.617263 GGATCGTTTGTTCGCTACAAGAT 59.383 43.478 3.70 4.62 46.81 2.40
2123 5454 4.092968 GGATCGTTTGTTCGCTACAAGATT 59.907 41.667 3.70 0.00 46.81 2.40
2124 5455 4.640805 TCGTTTGTTCGCTACAAGATTC 57.359 40.909 3.70 0.00 46.81 2.52
2125 5456 4.052608 TCGTTTGTTCGCTACAAGATTCA 58.947 39.130 3.70 0.00 46.81 2.57
2126 5457 4.084745 TCGTTTGTTCGCTACAAGATTCAC 60.085 41.667 3.70 0.00 46.81 3.18
2127 5458 4.141680 GTTTGTTCGCTACAAGATTCACG 58.858 43.478 3.70 0.00 46.81 4.35
2128 5459 1.724623 TGTTCGCTACAAGATTCACGC 59.275 47.619 0.00 0.00 32.64 5.34
2129 5460 1.993370 GTTCGCTACAAGATTCACGCT 59.007 47.619 0.00 0.00 0.00 5.07
2130 5461 1.629013 TCGCTACAAGATTCACGCTG 58.371 50.000 0.00 0.00 0.00 5.18
2131 5462 0.647410 CGCTACAAGATTCACGCTGG 59.353 55.000 0.00 0.00 0.00 4.85
2132 5463 1.726853 GCTACAAGATTCACGCTGGT 58.273 50.000 0.00 0.00 0.00 4.00
2133 5464 1.394917 GCTACAAGATTCACGCTGGTG 59.605 52.381 0.00 0.00 45.78 4.17
2134 5465 2.688507 CTACAAGATTCACGCTGGTGT 58.311 47.619 0.00 0.00 44.68 4.16
2135 5466 1.229428 ACAAGATTCACGCTGGTGTG 58.771 50.000 7.84 7.84 44.68 3.82
2136 5467 0.110056 CAAGATTCACGCTGGTGTGC 60.110 55.000 9.14 0.00 44.68 4.57
2137 5468 1.237285 AAGATTCACGCTGGTGTGCC 61.237 55.000 9.14 2.36 44.68 5.01
2138 5469 1.672356 GATTCACGCTGGTGTGCCT 60.672 57.895 9.14 0.00 44.68 4.75
2139 5470 1.915614 GATTCACGCTGGTGTGCCTG 61.916 60.000 9.14 0.00 44.68 4.85
2140 5471 2.680974 ATTCACGCTGGTGTGCCTGT 62.681 55.000 9.14 0.00 44.68 4.00
2141 5472 3.349006 CACGCTGGTGTGCCTGTC 61.349 66.667 1.30 0.00 39.38 3.51
2142 5473 4.626081 ACGCTGGTGTGCCTGTCC 62.626 66.667 0.00 0.00 36.26 4.02
2143 5474 4.320456 CGCTGGTGTGCCTGTCCT 62.320 66.667 0.00 0.00 36.26 3.85
2144 5475 2.113986 GCTGGTGTGCCTGTCCTT 59.886 61.111 0.00 0.00 36.26 3.36
2145 5476 2.263741 GCTGGTGTGCCTGTCCTTG 61.264 63.158 0.00 0.00 36.26 3.61
2146 5477 1.149174 CTGGTGTGCCTGTCCTTGT 59.851 57.895 0.00 0.00 35.27 3.16
2147 5478 0.466189 CTGGTGTGCCTGTCCTTGTT 60.466 55.000 0.00 0.00 35.27 2.83
2148 5479 0.033601 TGGTGTGCCTGTCCTTGTTT 60.034 50.000 0.00 0.00 35.27 2.83
2149 5480 1.213182 TGGTGTGCCTGTCCTTGTTTA 59.787 47.619 0.00 0.00 35.27 2.01
2150 5481 1.880027 GGTGTGCCTGTCCTTGTTTAG 59.120 52.381 0.00 0.00 0.00 1.85
2151 5482 1.880027 GTGTGCCTGTCCTTGTTTAGG 59.120 52.381 0.00 0.00 46.27 2.69
2155 5486 1.826385 CCTGTCCTTGTTTAGGCCTG 58.174 55.000 17.99 0.00 44.37 4.85
2156 5487 1.073923 CCTGTCCTTGTTTAGGCCTGT 59.926 52.381 17.99 0.00 44.37 4.00
2157 5488 2.154462 CTGTCCTTGTTTAGGCCTGTG 58.846 52.381 17.99 0.00 44.37 3.66
2158 5489 1.493022 TGTCCTTGTTTAGGCCTGTGT 59.507 47.619 17.99 0.00 44.37 3.72
2159 5490 2.706723 TGTCCTTGTTTAGGCCTGTGTA 59.293 45.455 17.99 0.00 44.37 2.90
2160 5491 3.136809 TGTCCTTGTTTAGGCCTGTGTAA 59.863 43.478 17.99 0.00 44.37 2.41
2161 5492 3.501062 GTCCTTGTTTAGGCCTGTGTAAC 59.499 47.826 17.99 14.32 44.37 2.50
2162 5493 2.482721 CCTTGTTTAGGCCTGTGTAACG 59.517 50.000 17.99 3.19 37.01 3.18
2163 5494 2.914695 TGTTTAGGCCTGTGTAACGT 57.085 45.000 17.99 0.00 42.39 3.99
2164 5495 4.309099 CTTGTTTAGGCCTGTGTAACGTA 58.691 43.478 17.99 6.04 42.39 3.57
2165 5496 3.652274 TGTTTAGGCCTGTGTAACGTAC 58.348 45.455 17.99 0.00 42.39 3.67
2166 5497 2.634982 TTAGGCCTGTGTAACGTACG 57.365 50.000 17.99 15.01 42.39 3.67
2167 5498 0.810648 TAGGCCTGTGTAACGTACGG 59.189 55.000 17.99 1.43 42.39 4.02
2168 5499 0.895100 AGGCCTGTGTAACGTACGGA 60.895 55.000 21.06 3.89 42.39 4.69
2169 5500 0.733909 GGCCTGTGTAACGTACGGAC 60.734 60.000 21.06 16.92 42.39 4.79
2170 5501 0.733909 GCCTGTGTAACGTACGGACC 60.734 60.000 21.06 11.09 42.39 4.46
2171 5502 0.597568 CCTGTGTAACGTACGGACCA 59.402 55.000 21.06 14.49 42.39 4.02
2172 5503 1.401931 CCTGTGTAACGTACGGACCAG 60.402 57.143 21.06 21.03 42.39 4.00
2173 5504 0.039256 TGTGTAACGTACGGACCAGC 60.039 55.000 21.06 10.16 42.39 4.85
2174 5505 0.733909 GTGTAACGTACGGACCAGCC 60.734 60.000 21.06 0.59 0.00 4.85
2175 5506 1.153765 GTAACGTACGGACCAGCCC 60.154 63.158 21.06 0.00 0.00 5.19
2176 5507 1.606025 TAACGTACGGACCAGCCCA 60.606 57.895 21.06 0.00 0.00 5.36
2177 5508 0.971959 TAACGTACGGACCAGCCCAT 60.972 55.000 21.06 0.00 0.00 4.00
2178 5509 1.833787 AACGTACGGACCAGCCCATT 61.834 55.000 21.06 0.00 0.00 3.16
2179 5510 1.078708 CGTACGGACCAGCCCATTT 60.079 57.895 7.57 0.00 0.00 2.32
2180 5511 1.087771 CGTACGGACCAGCCCATTTC 61.088 60.000 7.57 0.00 0.00 2.17
2181 5512 0.252197 GTACGGACCAGCCCATTTCT 59.748 55.000 0.00 0.00 0.00 2.52
2182 5513 0.539986 TACGGACCAGCCCATTTCTC 59.460 55.000 0.00 0.00 0.00 2.87
2183 5514 1.201429 ACGGACCAGCCCATTTCTCT 61.201 55.000 0.00 0.00 0.00 3.10
2184 5515 0.035056 CGGACCAGCCCATTTCTCTT 60.035 55.000 0.00 0.00 0.00 2.85
2185 5516 1.614317 CGGACCAGCCCATTTCTCTTT 60.614 52.381 0.00 0.00 0.00 2.52
2186 5517 2.529632 GGACCAGCCCATTTCTCTTTT 58.470 47.619 0.00 0.00 0.00 2.27
2187 5518 2.899900 GGACCAGCCCATTTCTCTTTTT 59.100 45.455 0.00 0.00 0.00 1.94
2203 5534 3.755810 TTTTTCCATCGGCCTTCCA 57.244 47.368 0.00 0.00 0.00 3.53
2204 5535 2.002505 TTTTTCCATCGGCCTTCCAA 57.997 45.000 0.00 0.00 0.00 3.53
2205 5536 1.253100 TTTTCCATCGGCCTTCCAAC 58.747 50.000 0.00 0.00 0.00 3.77
2206 5537 0.404040 TTTCCATCGGCCTTCCAACT 59.596 50.000 0.00 0.00 0.00 3.16
2207 5538 0.322456 TTCCATCGGCCTTCCAACTG 60.322 55.000 0.00 0.00 0.00 3.16
2208 5539 1.002134 CCATCGGCCTTCCAACTGT 60.002 57.895 0.00 0.00 0.00 3.55
2209 5540 0.609131 CCATCGGCCTTCCAACTGTT 60.609 55.000 0.00 0.00 0.00 3.16
2210 5541 0.523072 CATCGGCCTTCCAACTGTTG 59.477 55.000 13.50 13.50 0.00 3.33
2211 5542 0.110486 ATCGGCCTTCCAACTGTTGT 59.890 50.000 18.38 0.00 0.00 3.32
2212 5543 0.106918 TCGGCCTTCCAACTGTTGTT 60.107 50.000 18.38 0.00 36.75 2.83
2213 5544 0.310854 CGGCCTTCCAACTGTTGTTC 59.689 55.000 18.38 3.65 33.52 3.18
2214 5545 0.310854 GGCCTTCCAACTGTTGTTCG 59.689 55.000 18.38 4.57 33.52 3.95
2215 5546 0.310854 GCCTTCCAACTGTTGTTCGG 59.689 55.000 18.38 14.87 33.52 4.30
2216 5547 0.310854 CCTTCCAACTGTTGTTCGGC 59.689 55.000 18.38 0.00 33.52 5.54
2217 5548 0.310854 CTTCCAACTGTTGTTCGGCC 59.689 55.000 18.38 0.00 33.52 6.13
2218 5549 1.440938 TTCCAACTGTTGTTCGGCCG 61.441 55.000 22.12 22.12 33.52 6.13
2219 5550 1.890041 CCAACTGTTGTTCGGCCGA 60.890 57.895 27.28 27.28 33.52 5.54
2220 5551 1.440938 CCAACTGTTGTTCGGCCGAA 61.441 55.000 35.81 35.81 33.52 4.30
2221 5552 0.378962 CAACTGTTGTTCGGCCGAAA 59.621 50.000 40.13 26.56 35.75 3.46
2222 5553 1.001815 CAACTGTTGTTCGGCCGAAAT 60.002 47.619 40.13 19.14 35.75 2.17
2223 5554 0.872388 ACTGTTGTTCGGCCGAAATC 59.128 50.000 40.13 29.78 35.75 2.17
2224 5555 0.871722 CTGTTGTTCGGCCGAAATCA 59.128 50.000 40.13 32.12 35.75 2.57
2225 5556 1.468520 CTGTTGTTCGGCCGAAATCAT 59.531 47.619 40.13 0.00 35.75 2.45
2226 5557 1.883275 TGTTGTTCGGCCGAAATCATT 59.117 42.857 40.13 0.00 35.75 2.57
2227 5558 3.075148 TGTTGTTCGGCCGAAATCATTA 58.925 40.909 40.13 22.27 35.75 1.90
2228 5559 3.502595 TGTTGTTCGGCCGAAATCATTAA 59.497 39.130 40.13 23.61 35.75 1.40
2229 5560 4.156922 TGTTGTTCGGCCGAAATCATTAAT 59.843 37.500 40.13 0.00 35.75 1.40
2230 5561 4.974368 TGTTCGGCCGAAATCATTAATT 57.026 36.364 40.13 0.00 35.75 1.40
2231 5562 6.127980 TGTTGTTCGGCCGAAATCATTAATTA 60.128 34.615 40.13 16.71 35.75 1.40
2232 5563 6.438259 TGTTCGGCCGAAATCATTAATTAA 57.562 33.333 40.13 13.01 35.75 1.40
2233 5564 6.491394 TGTTCGGCCGAAATCATTAATTAAG 58.509 36.000 40.13 0.00 35.75 1.85
2234 5565 5.682943 TCGGCCGAAATCATTAATTAAGG 57.317 39.130 28.99 3.46 0.00 2.69
2235 5566 5.369833 TCGGCCGAAATCATTAATTAAGGA 58.630 37.500 28.99 14.37 0.00 3.36
2236 5567 5.468746 TCGGCCGAAATCATTAATTAAGGAG 59.531 40.000 28.99 5.45 28.93 3.69
2237 5568 5.238650 CGGCCGAAATCATTAATTAAGGAGT 59.761 40.000 24.07 12.14 28.93 3.85
2238 5569 6.425721 CGGCCGAAATCATTAATTAAGGAGTA 59.574 38.462 24.07 0.00 28.93 2.59
2239 5570 7.570691 CGGCCGAAATCATTAATTAAGGAGTAC 60.571 40.741 24.07 9.67 28.93 2.73
2240 5571 7.444487 GGCCGAAATCATTAATTAAGGAGTACT 59.556 37.037 16.73 0.00 28.93 2.73
2241 5572 8.496751 GCCGAAATCATTAATTAAGGAGTACTC 58.503 37.037 14.87 14.87 28.93 2.59
2242 5573 8.700644 CCGAAATCATTAATTAAGGAGTACTCG 58.299 37.037 19.40 19.40 28.93 4.18
2243 5574 9.245962 CGAAATCATTAATTAAGGAGTACTCGT 57.754 33.333 18.64 14.43 28.93 4.18
2246 5577 7.766219 TCATTAATTAAGGAGTACTCGTTGC 57.234 36.000 31.33 13.49 38.07 4.17
2247 5578 7.324935 TCATTAATTAAGGAGTACTCGTTGCA 58.675 34.615 31.33 21.45 38.07 4.08
2248 5579 7.820386 TCATTAATTAAGGAGTACTCGTTGCAA 59.180 33.333 31.33 22.18 38.07 4.08
2249 5580 7.966246 TTAATTAAGGAGTACTCGTTGCAAA 57.034 32.000 31.33 21.62 38.07 3.68
2250 5581 6.481954 AATTAAGGAGTACTCGTTGCAAAG 57.518 37.500 31.33 2.46 38.07 2.77
2251 5582 3.746045 AAGGAGTACTCGTTGCAAAGA 57.254 42.857 25.72 14.45 36.47 2.52
2252 5583 3.746045 AGGAGTACTCGTTGCAAAGAA 57.254 42.857 15.91 0.00 0.00 2.52
2253 5584 3.391049 AGGAGTACTCGTTGCAAAGAAC 58.609 45.455 15.91 11.95 0.00 3.01
2254 5585 3.128349 GGAGTACTCGTTGCAAAGAACA 58.872 45.455 15.91 4.24 0.00 3.18
2255 5586 3.059800 GGAGTACTCGTTGCAAAGAACAC 60.060 47.826 15.91 14.96 0.00 3.32
2256 5587 3.793559 AGTACTCGTTGCAAAGAACACT 58.206 40.909 15.91 16.69 0.00 3.55
2257 5588 3.802685 AGTACTCGTTGCAAAGAACACTC 59.197 43.478 15.91 5.78 0.00 3.51
2258 5589 1.940613 ACTCGTTGCAAAGAACACTCC 59.059 47.619 15.91 0.00 0.00 3.85
2259 5590 1.939934 CTCGTTGCAAAGAACACTCCA 59.060 47.619 15.91 0.00 0.00 3.86
2260 5591 2.549754 CTCGTTGCAAAGAACACTCCAT 59.450 45.455 15.91 0.00 0.00 3.41
2261 5592 2.548057 TCGTTGCAAAGAACACTCCATC 59.452 45.455 12.88 0.00 0.00 3.51
2262 5593 2.549754 CGTTGCAAAGAACACTCCATCT 59.450 45.455 6.52 0.00 0.00 2.90
2263 5594 3.003689 CGTTGCAAAGAACACTCCATCTT 59.996 43.478 6.52 0.00 37.49 2.40
2264 5595 4.498009 CGTTGCAAAGAACACTCCATCTTT 60.498 41.667 6.52 0.00 44.49 2.52
2265 5596 4.836125 TGCAAAGAACACTCCATCTTTC 57.164 40.909 0.00 0.00 42.41 2.62
2266 5597 3.569701 TGCAAAGAACACTCCATCTTTCC 59.430 43.478 0.00 0.00 42.41 3.13
2267 5598 3.569701 GCAAAGAACACTCCATCTTTCCA 59.430 43.478 0.00 0.00 42.41 3.53
2268 5599 4.320788 GCAAAGAACACTCCATCTTTCCAG 60.321 45.833 0.00 0.00 42.41 3.86
2269 5600 3.710209 AGAACACTCCATCTTTCCAGG 57.290 47.619 0.00 0.00 0.00 4.45
2270 5601 2.982488 AGAACACTCCATCTTTCCAGGT 59.018 45.455 0.00 0.00 0.00 4.00
2271 5602 3.008485 AGAACACTCCATCTTTCCAGGTC 59.992 47.826 0.00 0.00 0.00 3.85
2272 5603 2.338809 ACACTCCATCTTTCCAGGTCA 58.661 47.619 0.00 0.00 0.00 4.02
2273 5604 2.039084 ACACTCCATCTTTCCAGGTCAC 59.961 50.000 0.00 0.00 0.00 3.67
2274 5605 1.276421 ACTCCATCTTTCCAGGTCACG 59.724 52.381 0.00 0.00 0.00 4.35
2275 5606 1.550524 CTCCATCTTTCCAGGTCACGA 59.449 52.381 0.00 0.00 0.00 4.35
2276 5607 1.275291 TCCATCTTTCCAGGTCACGAC 59.725 52.381 0.00 0.00 0.00 4.34
2277 5608 1.001974 CCATCTTTCCAGGTCACGACA 59.998 52.381 0.00 0.00 0.00 4.35
2278 5609 2.549992 CCATCTTTCCAGGTCACGACAA 60.550 50.000 0.00 0.00 0.00 3.18
2279 5610 2.526304 TCTTTCCAGGTCACGACAAG 57.474 50.000 0.00 0.00 0.00 3.16
2280 5611 1.760613 TCTTTCCAGGTCACGACAAGT 59.239 47.619 0.00 0.00 0.00 3.16
2290 5621 3.869187 CGACAAGTGGCGCACATA 58.131 55.556 10.83 0.00 40.91 2.29
2291 5622 1.419922 CGACAAGTGGCGCACATAC 59.580 57.895 10.83 2.11 40.91 2.39
2292 5623 1.288419 CGACAAGTGGCGCACATACA 61.288 55.000 10.83 0.00 40.91 2.29
2293 5624 0.443869 GACAAGTGGCGCACATACAG 59.556 55.000 10.83 2.38 36.74 2.74
2294 5625 1.135315 CAAGTGGCGCACATACAGC 59.865 57.895 10.83 0.00 36.74 4.40
2301 5632 4.520846 GCACATACAGCGCGCCAC 62.521 66.667 30.33 0.00 0.00 5.01
2302 5633 2.815211 CACATACAGCGCGCCACT 60.815 61.111 30.33 13.06 0.00 4.00
2303 5634 2.047274 ACATACAGCGCGCCACTT 60.047 55.556 30.33 12.22 0.00 3.16
2304 5635 2.390599 ACATACAGCGCGCCACTTG 61.391 57.895 30.33 22.08 0.00 3.16
2305 5636 2.047274 ATACAGCGCGCCACTTGT 60.047 55.556 30.33 26.70 0.00 3.16
2306 5637 2.100631 ATACAGCGCGCCACTTGTC 61.101 57.895 30.33 0.00 0.00 3.18
2313 5644 2.972505 CGCCACTTGTCGCAACCT 60.973 61.111 0.00 0.00 0.00 3.50
2314 5645 2.639286 GCCACTTGTCGCAACCTG 59.361 61.111 0.00 0.00 0.00 4.00
2315 5646 2.908073 GCCACTTGTCGCAACCTGG 61.908 63.158 0.00 0.00 0.00 4.45
2316 5647 2.260869 CCACTTGTCGCAACCTGGG 61.261 63.158 0.00 0.00 0.00 4.45
2317 5648 1.227823 CACTTGTCGCAACCTGGGA 60.228 57.895 0.00 0.00 36.96 4.37
2318 5649 1.071471 ACTTGTCGCAACCTGGGAG 59.929 57.895 0.00 0.00 40.09 4.30
2319 5650 1.071471 CTTGTCGCAACCTGGGAGT 59.929 57.895 0.00 0.00 40.09 3.85
2320 5651 0.535102 CTTGTCGCAACCTGGGAGTT 60.535 55.000 0.00 0.00 40.09 3.01
2321 5652 0.106918 TTGTCGCAACCTGGGAGTTT 60.107 50.000 0.00 0.00 40.09 2.66
2322 5653 0.106918 TGTCGCAACCTGGGAGTTTT 60.107 50.000 0.00 0.00 40.09 2.43
2323 5654 0.591659 GTCGCAACCTGGGAGTTTTC 59.408 55.000 0.00 0.00 40.09 2.29
2324 5655 0.472471 TCGCAACCTGGGAGTTTTCT 59.528 50.000 0.00 0.00 34.23 2.52
2325 5656 0.875059 CGCAACCTGGGAGTTTTCTC 59.125 55.000 0.00 0.00 45.49 2.87
2326 5657 1.543429 CGCAACCTGGGAGTTTTCTCT 60.543 52.381 0.00 0.00 45.52 3.10
2327 5658 2.587522 GCAACCTGGGAGTTTTCTCTT 58.412 47.619 0.00 0.00 45.52 2.85
2328 5659 2.959030 GCAACCTGGGAGTTTTCTCTTT 59.041 45.455 0.00 0.00 45.52 2.52
2329 5660 3.384789 GCAACCTGGGAGTTTTCTCTTTT 59.615 43.478 0.00 0.00 45.52 2.27
2330 5661 4.141937 GCAACCTGGGAGTTTTCTCTTTTT 60.142 41.667 0.00 0.00 45.52 1.94
2354 5685 8.630494 TTTCGTAGATTCGTTTATTCAAAACG 57.370 30.769 14.92 14.92 45.10 3.60
2355 5686 7.786114 TTCGTAGATTCGTTTATTCAAAACGT 58.214 30.769 18.93 4.76 44.53 3.99
2356 5687 8.274939 TTCGTAGATTCGTTTATTCAAAACGTT 58.725 29.630 18.93 0.00 44.53 3.99
2371 5702 8.770850 TTCAAAACGTTTTATCTCTTAAACCG 57.229 30.769 24.79 8.91 40.37 4.44
2372 5703 7.918643 TCAAAACGTTTTATCTCTTAAACCGT 58.081 30.769 24.79 0.00 46.69 4.83
2373 5704 7.851963 TCAAAACGTTTTATCTCTTAAACCGTG 59.148 33.333 24.79 8.65 44.82 4.94
2374 5705 5.273523 ACGTTTTATCTCTTAAACCGTGC 57.726 39.130 0.86 0.00 44.18 5.34
2375 5706 4.143263 ACGTTTTATCTCTTAAACCGTGCG 60.143 41.667 0.86 0.00 44.18 5.34
2376 5707 4.143263 CGTTTTATCTCTTAAACCGTGCGT 60.143 41.667 0.00 0.00 32.79 5.24
2377 5708 5.311271 GTTTTATCTCTTAAACCGTGCGTC 58.689 41.667 0.00 0.00 29.47 5.19
2378 5709 2.005971 ATCTCTTAAACCGTGCGTCC 57.994 50.000 0.00 0.00 0.00 4.79
2379 5710 0.675083 TCTCTTAAACCGTGCGTCCA 59.325 50.000 0.00 0.00 0.00 4.02
2380 5711 1.068895 TCTCTTAAACCGTGCGTCCAA 59.931 47.619 0.00 0.00 0.00 3.53
2381 5712 1.868498 CTCTTAAACCGTGCGTCCAAA 59.132 47.619 0.00 0.00 0.00 3.28
2382 5713 2.482721 CTCTTAAACCGTGCGTCCAAAT 59.517 45.455 0.00 0.00 0.00 2.32
2383 5714 2.481185 TCTTAAACCGTGCGTCCAAATC 59.519 45.455 0.00 0.00 0.00 2.17
2384 5715 2.172851 TAAACCGTGCGTCCAAATCT 57.827 45.000 0.00 0.00 0.00 2.40
2385 5716 0.872388 AAACCGTGCGTCCAAATCTC 59.128 50.000 0.00 0.00 0.00 2.75
2386 5717 0.250124 AACCGTGCGTCCAAATCTCA 60.250 50.000 0.00 0.00 0.00 3.27
2387 5718 0.250124 ACCGTGCGTCCAAATCTCAA 60.250 50.000 0.00 0.00 0.00 3.02
2388 5719 0.871722 CCGTGCGTCCAAATCTCAAA 59.128 50.000 0.00 0.00 0.00 2.69
2389 5720 1.399727 CCGTGCGTCCAAATCTCAAAC 60.400 52.381 0.00 0.00 0.00 2.93
2390 5721 1.399727 CGTGCGTCCAAATCTCAAACC 60.400 52.381 0.00 0.00 0.00 3.27
2391 5722 0.871722 TGCGTCCAAATCTCAAACCG 59.128 50.000 0.00 0.00 0.00 4.44
2392 5723 0.872388 GCGTCCAAATCTCAAACCGT 59.128 50.000 0.00 0.00 0.00 4.83
2393 5724 1.265905 GCGTCCAAATCTCAAACCGTT 59.734 47.619 0.00 0.00 0.00 4.44
2394 5725 2.287368 GCGTCCAAATCTCAAACCGTTT 60.287 45.455 0.00 0.00 0.00 3.60
2395 5726 3.794138 GCGTCCAAATCTCAAACCGTTTT 60.794 43.478 0.00 0.00 0.00 2.43
2396 5727 3.972502 CGTCCAAATCTCAAACCGTTTTC 59.027 43.478 0.00 0.00 0.00 2.29
2397 5728 4.496673 CGTCCAAATCTCAAACCGTTTTCA 60.497 41.667 0.00 0.00 0.00 2.69
2398 5729 4.738252 GTCCAAATCTCAAACCGTTTTCAC 59.262 41.667 0.00 0.00 0.00 3.18
2399 5730 4.048504 CCAAATCTCAAACCGTTTTCACC 58.951 43.478 0.00 0.00 0.00 4.02
2400 5731 4.440802 CCAAATCTCAAACCGTTTTCACCA 60.441 41.667 0.00 0.00 0.00 4.17
2401 5732 5.288804 CAAATCTCAAACCGTTTTCACCAT 58.711 37.500 0.00 0.00 0.00 3.55
2402 5733 5.529581 AATCTCAAACCGTTTTCACCATT 57.470 34.783 0.00 0.00 0.00 3.16
2403 5734 4.300189 TCTCAAACCGTTTTCACCATTG 57.700 40.909 0.00 0.00 0.00 2.82
2404 5735 3.067461 TCTCAAACCGTTTTCACCATTGG 59.933 43.478 0.00 0.00 0.00 3.16
2405 5736 3.024547 TCAAACCGTTTTCACCATTGGA 58.975 40.909 10.37 0.00 0.00 3.53
2406 5737 3.639094 TCAAACCGTTTTCACCATTGGAT 59.361 39.130 10.37 0.00 0.00 3.41
2407 5738 4.100189 TCAAACCGTTTTCACCATTGGATT 59.900 37.500 10.37 0.00 0.00 3.01
2408 5739 3.934457 ACCGTTTTCACCATTGGATTC 57.066 42.857 10.37 0.00 0.00 2.52
2409 5740 2.560981 ACCGTTTTCACCATTGGATTCC 59.439 45.455 10.37 0.00 0.00 3.01
2410 5741 2.825532 CCGTTTTCACCATTGGATTCCT 59.174 45.455 10.37 0.00 0.00 3.36
2411 5742 3.119495 CCGTTTTCACCATTGGATTCCTC 60.119 47.826 10.37 0.00 0.00 3.71
2412 5743 3.426159 CGTTTTCACCATTGGATTCCTCG 60.426 47.826 10.37 3.97 0.00 4.63
2413 5744 1.750193 TTCACCATTGGATTCCTCGC 58.250 50.000 10.37 0.00 0.00 5.03
2414 5745 0.461870 TCACCATTGGATTCCTCGCG 60.462 55.000 10.37 0.00 0.00 5.87
2415 5746 0.744414 CACCATTGGATTCCTCGCGT 60.744 55.000 10.37 0.00 0.00 6.01
2416 5747 0.462047 ACCATTGGATTCCTCGCGTC 60.462 55.000 10.37 0.00 0.00 5.19
2417 5748 1.490693 CCATTGGATTCCTCGCGTCG 61.491 60.000 5.77 0.00 0.00 5.12
2418 5749 0.527600 CATTGGATTCCTCGCGTCGA 60.528 55.000 5.77 0.00 0.00 4.20
2431 5762 3.829948 TCGCGTCGAGATCTTTAAAACT 58.170 40.909 5.77 0.00 0.00 2.66
2432 5763 4.973396 TCGCGTCGAGATCTTTAAAACTA 58.027 39.130 5.77 0.00 0.00 2.24
2433 5764 5.026462 TCGCGTCGAGATCTTTAAAACTAG 58.974 41.667 5.77 0.00 0.00 2.57
2434 5765 5.026462 CGCGTCGAGATCTTTAAAACTAGA 58.974 41.667 0.00 0.00 0.00 2.43
2435 5766 5.681982 CGCGTCGAGATCTTTAAAACTAGAT 59.318 40.000 0.00 0.00 33.92 1.98
2436 5767 6.129665 CGCGTCGAGATCTTTAAAACTAGATC 60.130 42.308 0.00 6.74 44.54 2.75
2437 5768 6.142639 GCGTCGAGATCTTTAAAACTAGATCC 59.857 42.308 10.09 3.63 45.05 3.36
2438 5769 6.637658 CGTCGAGATCTTTAAAACTAGATCCC 59.362 42.308 10.09 0.40 45.05 3.85
2439 5770 7.490000 GTCGAGATCTTTAAAACTAGATCCCA 58.510 38.462 10.09 0.00 45.05 4.37
2440 5771 8.145122 GTCGAGATCTTTAAAACTAGATCCCAT 58.855 37.037 10.09 0.00 45.05 4.00
2441 5772 8.144478 TCGAGATCTTTAAAACTAGATCCCATG 58.856 37.037 10.09 0.00 45.05 3.66
2442 5773 7.928706 CGAGATCTTTAAAACTAGATCCCATGT 59.071 37.037 10.09 0.00 45.05 3.21
2443 5774 9.620259 GAGATCTTTAAAACTAGATCCCATGTT 57.380 33.333 10.09 0.00 45.05 2.71
2444 5775 9.401058 AGATCTTTAAAACTAGATCCCATGTTG 57.599 33.333 10.09 0.00 45.05 3.33
2445 5776 9.396022 GATCTTTAAAACTAGATCCCATGTTGA 57.604 33.333 0.00 0.00 40.45 3.18
2446 5777 9.927081 ATCTTTAAAACTAGATCCCATGTTGAT 57.073 29.630 0.00 0.00 0.00 2.57
2449 5780 9.627123 TTTAAAACTAGATCCCATGTTGATAGG 57.373 33.333 0.00 0.00 0.00 2.57
2450 5781 6.831664 AAACTAGATCCCATGTTGATAGGT 57.168 37.500 0.00 0.00 0.00 3.08
2451 5782 6.831664 AACTAGATCCCATGTTGATAGGTT 57.168 37.500 0.00 0.00 0.00 3.50
2452 5783 6.831664 ACTAGATCCCATGTTGATAGGTTT 57.168 37.500 0.00 0.00 0.00 3.27
2453 5784 7.213178 ACTAGATCCCATGTTGATAGGTTTT 57.787 36.000 0.00 0.00 0.00 2.43
2454 5785 7.056635 ACTAGATCCCATGTTGATAGGTTTTG 58.943 38.462 0.00 0.00 0.00 2.44
2455 5786 6.078456 AGATCCCATGTTGATAGGTTTTGA 57.922 37.500 0.00 0.00 0.00 2.69
2456 5787 5.888161 AGATCCCATGTTGATAGGTTTTGAC 59.112 40.000 0.00 0.00 0.00 3.18
2457 5788 4.006989 TCCCATGTTGATAGGTTTTGACG 58.993 43.478 0.00 0.00 0.00 4.35
2458 5789 4.006989 CCCATGTTGATAGGTTTTGACGA 58.993 43.478 0.00 0.00 0.00 4.20
2459 5790 4.457603 CCCATGTTGATAGGTTTTGACGAA 59.542 41.667 0.00 0.00 0.00 3.85
2460 5791 5.390613 CCATGTTGATAGGTTTTGACGAAC 58.609 41.667 0.00 0.00 0.00 3.95
2461 5792 5.181245 CCATGTTGATAGGTTTTGACGAACT 59.819 40.000 0.00 0.00 0.00 3.01
2462 5793 6.293955 CCATGTTGATAGGTTTTGACGAACTT 60.294 38.462 0.00 0.00 0.00 2.66
2463 5794 6.687081 TGTTGATAGGTTTTGACGAACTTT 57.313 33.333 0.00 0.00 0.00 2.66
2464 5795 7.090953 TGTTGATAGGTTTTGACGAACTTTT 57.909 32.000 0.00 0.00 0.00 2.27
2465 5796 7.540299 TGTTGATAGGTTTTGACGAACTTTTT 58.460 30.769 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.079127 CGTTGAGAACCGGCATCCT 60.079 57.895 0.00 0.00 0.00 3.24
95 96 3.738281 CGTGATTGAGAGCCTATTTCGGT 60.738 47.826 0.00 0.00 0.00 4.69
96 97 2.797156 CGTGATTGAGAGCCTATTTCGG 59.203 50.000 0.00 0.00 0.00 4.30
120 121 0.035458 CGAGGTTCTGGTCAGCCTTT 59.965 55.000 0.00 0.00 35.27 3.11
126 127 3.319198 GGGCCGAGGTTCTGGTCA 61.319 66.667 0.00 0.00 0.00 4.02
149 150 4.134563 TGACCTTTTTCTAGTCTGCAACC 58.865 43.478 0.00 0.00 0.00 3.77
187 188 0.031178 CTTCAAGGGCAGTGTGTTGC 59.969 55.000 0.00 0.00 43.34 4.17
190 191 1.529244 GGCTTCAAGGGCAGTGTGT 60.529 57.895 0.00 0.00 0.00 3.72
300 308 2.983592 GTGAACTTGCCGTGGGGG 60.984 66.667 0.00 0.00 39.58 5.40
305 329 1.664965 GAGCTCGTGAACTTGCCGT 60.665 57.895 0.00 0.00 0.00 5.68
310 334 0.249911 GGTGGTGAGCTCGTGAACTT 60.250 55.000 9.64 0.00 0.00 2.66
327 351 3.310860 GACCTGGTTCGATGGCGGT 62.311 63.158 0.00 0.00 38.28 5.68
347 371 0.679321 AAGAAGCTGGCAGGCTAAGC 60.679 55.000 17.64 0.62 42.24 3.09
348 372 1.742268 GAAAGAAGCTGGCAGGCTAAG 59.258 52.381 17.64 0.00 42.24 2.18
349 373 1.826385 GAAAGAAGCTGGCAGGCTAA 58.174 50.000 17.64 0.00 42.24 3.09
350 374 0.391661 CGAAAGAAGCTGGCAGGCTA 60.392 55.000 17.64 0.00 42.24 3.93
351 375 1.673665 CGAAAGAAGCTGGCAGGCT 60.674 57.895 17.64 11.02 45.30 4.58
352 376 1.672356 TCGAAAGAAGCTGGCAGGC 60.672 57.895 17.64 8.72 37.03 4.85
353 377 1.630244 CGTCGAAAGAAGCTGGCAGG 61.630 60.000 17.64 0.00 45.01 4.85
354 378 1.630244 CCGTCGAAAGAAGCTGGCAG 61.630 60.000 10.94 10.94 45.01 4.85
355 379 1.667830 CCGTCGAAAGAAGCTGGCA 60.668 57.895 0.00 0.00 45.01 4.92
356 380 3.028366 GCCGTCGAAAGAAGCTGGC 62.028 63.158 0.00 0.00 45.01 4.85
357 381 2.730672 CGCCGTCGAAAGAAGCTGG 61.731 63.158 0.00 0.00 45.01 4.85
358 382 2.730672 CCGCCGTCGAAAGAAGCTG 61.731 63.158 0.00 0.00 45.01 4.24
359 383 2.432628 CCGCCGTCGAAAGAAGCT 60.433 61.111 0.00 0.00 45.01 3.74
418 442 2.759973 CTAGGGAGGCGGCTCACA 60.760 66.667 38.61 24.41 0.00 3.58
429 454 2.439701 CCACGTCGCTCCTAGGGA 60.440 66.667 9.46 0.00 34.60 4.20
457 482 7.733969 TCAGTACTTACATCCGTAGTAGAGAT 58.266 38.462 0.00 0.00 0.00 2.75
467 492 4.091509 GTGTTTGCTCAGTACTTACATCCG 59.908 45.833 0.00 0.00 0.00 4.18
479 504 2.292569 AGACTTGCATGTGTTTGCTCAG 59.707 45.455 10.37 0.00 43.18 3.35
502 527 7.349598 AGATCTAGCCACACCATTTTCTAAAT 58.650 34.615 0.00 0.00 0.00 1.40
508 533 4.018960 ACTGAGATCTAGCCACACCATTTT 60.019 41.667 0.00 0.00 0.00 1.82
530 555 6.091849 GGGACTTGGTTAAATCTTTAGTCGAC 59.908 42.308 7.70 7.70 0.00 4.20
537 562 7.290014 ACTTGATTGGGACTTGGTTAAATCTTT 59.710 33.333 0.00 0.00 0.00 2.52
542 567 5.450453 TCACTTGATTGGGACTTGGTTAAA 58.550 37.500 0.00 0.00 0.00 1.52
548 573 4.580167 TGTTCTTCACTTGATTGGGACTTG 59.420 41.667 0.00 0.00 0.00 3.16
594 619 9.619316 CATTCACCTAATCACGTTCATTTTTAA 57.381 29.630 0.00 0.00 0.00 1.52
595 620 9.004717 TCATTCACCTAATCACGTTCATTTTTA 57.995 29.630 0.00 0.00 0.00 1.52
596 621 7.881142 TCATTCACCTAATCACGTTCATTTTT 58.119 30.769 0.00 0.00 0.00 1.94
597 622 7.447374 TCATTCACCTAATCACGTTCATTTT 57.553 32.000 0.00 0.00 0.00 1.82
653 684 1.089920 GTAGGTGCACTGCTCCAATG 58.910 55.000 21.39 0.00 43.69 2.82
661 692 5.171476 GCTATATATGGTGTAGGTGCACTG 58.829 45.833 17.98 0.00 39.21 3.66
672 703 7.387119 TCTTGTACGTAGGCTATATATGGTG 57.613 40.000 0.00 0.00 0.00 4.17
688 719 6.090358 ACATTTACTCCGTTGATTCTTGTACG 59.910 38.462 0.00 0.00 0.00 3.67
747 1998 6.464222 TGATGTAGTATAATACAAGGCCAGC 58.536 40.000 16.24 0.00 39.04 4.85
760 2011 9.955208 CATTTAACGTGTACCTGATGTAGTATA 57.045 33.333 0.00 0.00 0.00 1.47
761 2012 7.924412 CCATTTAACGTGTACCTGATGTAGTAT 59.076 37.037 0.00 0.00 0.00 2.12
762 2013 7.259882 CCATTTAACGTGTACCTGATGTAGTA 58.740 38.462 0.00 0.00 0.00 1.82
763 2014 6.103997 CCATTTAACGTGTACCTGATGTAGT 58.896 40.000 0.00 0.00 0.00 2.73
764 2015 5.006358 GCCATTTAACGTGTACCTGATGTAG 59.994 44.000 0.00 0.00 0.00 2.74
779 2030 8.457238 AGGAAAGAGATTGATAGCCATTTAAC 57.543 34.615 0.00 0.00 0.00 2.01
788 2039 7.550551 TGCTGTTGTAAGGAAAGAGATTGATAG 59.449 37.037 0.00 0.00 0.00 2.08
904 2161 6.678411 TGGGGCTTCTAGATGGCTATTTATAT 59.322 38.462 25.23 0.00 0.00 0.86
938 2195 7.200455 ACAATGCCTTTTTGTTGTTCTACTAC 58.800 34.615 0.00 0.00 33.64 2.73
939 2196 7.341445 ACAATGCCTTTTTGTTGTTCTACTA 57.659 32.000 0.00 0.00 33.64 1.82
940 2197 6.220726 ACAATGCCTTTTTGTTGTTCTACT 57.779 33.333 0.00 0.00 33.64 2.57
1007 3973 5.880332 GCCACAAGGATCACTATTAGTTTGA 59.120 40.000 10.65 0.67 36.89 2.69
1053 4020 6.214615 TGGAGATTGTTTGGATACCTCTGTTA 59.785 38.462 0.00 0.00 0.00 2.41
1323 4640 1.745320 GCCGGGTAGACATCGATGGT 61.745 60.000 28.09 17.45 0.00 3.55
1502 4819 1.076438 AAGAACTTTGGGGGAGGGAG 58.924 55.000 0.00 0.00 0.00 4.30
1504 4821 0.777446 TCAAGAACTTTGGGGGAGGG 59.223 55.000 0.00 0.00 0.00 4.30
1505 4822 2.907458 ATCAAGAACTTTGGGGGAGG 57.093 50.000 0.00 0.00 0.00 4.30
1507 4824 3.895041 GACAAATCAAGAACTTTGGGGGA 59.105 43.478 0.00 0.00 36.81 4.81
1508 4825 3.897505 AGACAAATCAAGAACTTTGGGGG 59.102 43.478 0.00 0.00 36.81 5.40
1509 4826 6.648879 TTAGACAAATCAAGAACTTTGGGG 57.351 37.500 0.00 0.00 36.81 4.96
1510 4827 9.546428 AAATTTAGACAAATCAAGAACTTTGGG 57.454 29.630 0.00 0.00 36.81 4.12
1537 4854 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
1538 4855 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
1539 4856 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
1540 4857 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
1541 4858 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
1542 4859 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
1543 4860 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
1544 4861 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
1545 4862 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
1546 4863 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
1547 4864 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
1548 4865 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
1549 4866 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
1550 4867 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
1551 4868 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
1552 4869 1.427753 ACCCTCCGTCCCAAAATTCTT 59.572 47.619 0.00 0.00 0.00 2.52
1553 4870 1.073098 ACCCTCCGTCCCAAAATTCT 58.927 50.000 0.00 0.00 0.00 2.40
1554 4871 2.640184 CTACCCTCCGTCCCAAAATTC 58.360 52.381 0.00 0.00 0.00 2.17
1555 4872 1.283905 CCTACCCTCCGTCCCAAAATT 59.716 52.381 0.00 0.00 0.00 1.82
1556 4873 0.916809 CCTACCCTCCGTCCCAAAAT 59.083 55.000 0.00 0.00 0.00 1.82
1557 4874 0.474273 ACCTACCCTCCGTCCCAAAA 60.474 55.000 0.00 0.00 0.00 2.44
1558 4875 1.159184 ACCTACCCTCCGTCCCAAA 59.841 57.895 0.00 0.00 0.00 3.28
1559 4876 1.611261 CACCTACCCTCCGTCCCAA 60.611 63.158 0.00 0.00 0.00 4.12
1560 4877 2.038329 CACCTACCCTCCGTCCCA 59.962 66.667 0.00 0.00 0.00 4.37
1561 4878 2.762875 CCACCTACCCTCCGTCCC 60.763 72.222 0.00 0.00 0.00 4.46
1562 4879 2.038490 ACCACCTACCCTCCGTCC 59.962 66.667 0.00 0.00 0.00 4.79
1563 4880 0.614134 AAGACCACCTACCCTCCGTC 60.614 60.000 0.00 0.00 0.00 4.79
1564 4881 0.706433 TAAGACCACCTACCCTCCGT 59.294 55.000 0.00 0.00 0.00 4.69
1565 4882 1.687123 CATAAGACCACCTACCCTCCG 59.313 57.143 0.00 0.00 0.00 4.63
1566 4883 3.042059 TCATAAGACCACCTACCCTCC 57.958 52.381 0.00 0.00 0.00 4.30
1567 4884 4.409247 ACAATCATAAGACCACCTACCCTC 59.591 45.833 0.00 0.00 0.00 4.30
1568 4885 4.371681 ACAATCATAAGACCACCTACCCT 58.628 43.478 0.00 0.00 0.00 4.34
1569 4886 4.772886 ACAATCATAAGACCACCTACCC 57.227 45.455 0.00 0.00 0.00 3.69
1570 4887 6.157211 CGATACAATCATAAGACCACCTACC 58.843 44.000 0.00 0.00 0.00 3.18
1571 4888 6.746120 ACGATACAATCATAAGACCACCTAC 58.254 40.000 0.00 0.00 0.00 3.18
1575 4892 9.477484 AGATTTACGATACAATCATAAGACCAC 57.523 33.333 0.00 0.00 32.61 4.16
1592 4909 9.496873 TCTTATTCAAAGGAAACAGATTTACGA 57.503 29.630 0.00 0.00 36.43 3.43
1634 4952 3.886123 AGTTGCAGTTACACTCCAAAGT 58.114 40.909 0.00 0.00 25.93 2.66
1683 5014 4.379339 TTTTTCCGTCAAAAAGGACAGG 57.621 40.909 0.00 0.00 38.76 4.00
1697 5028 4.202070 TGCAAGTAAGGGTTTCTTTTTCCG 60.202 41.667 0.00 0.00 36.93 4.30
1705 5036 6.753107 TTATAAGCTGCAAGTAAGGGTTTC 57.247 37.500 1.02 0.00 35.30 2.78
1707 5038 7.718334 AAATTATAAGCTGCAAGTAAGGGTT 57.282 32.000 1.02 0.00 35.30 4.11
1708 5039 7.396055 TGAAAATTATAAGCTGCAAGTAAGGGT 59.604 33.333 1.02 0.00 35.30 4.34
1709 5040 7.771183 TGAAAATTATAAGCTGCAAGTAAGGG 58.229 34.615 1.02 0.00 35.30 3.95
1710 5041 7.433425 GCTGAAAATTATAAGCTGCAAGTAAGG 59.567 37.037 1.02 0.00 35.30 2.69
1715 5046 5.572211 TCGCTGAAAATTATAAGCTGCAAG 58.428 37.500 1.02 0.00 33.41 4.01
1775 5106 2.229792 GGGCTGATTTGTCAACACTCA 58.770 47.619 0.00 0.00 0.00 3.41
1791 5122 3.325716 GCAATTATGATTCCCATTGGGCT 59.674 43.478 17.60 6.60 43.94 5.19
1809 5140 1.335872 GCCAACAAGCTTACACGCAAT 60.336 47.619 0.00 0.00 0.00 3.56
1810 5141 0.030101 GCCAACAAGCTTACACGCAA 59.970 50.000 0.00 0.00 0.00 4.85
1848 5179 0.319125 TAGCACGTCGCACAACATCA 60.319 50.000 11.58 0.00 46.13 3.07
1895 5226 1.950216 TGTTTCAACTAATGCGCACCA 59.050 42.857 14.90 1.44 0.00 4.17
1952 5283 5.865085 TCTCATCTAGAGGAGAGTTAGAGC 58.135 45.833 28.52 0.00 42.49 4.09
1964 5295 8.094798 AGACGCTAACTAATTCTCATCTAGAG 57.905 38.462 0.00 0.00 46.14 2.43
1984 5315 6.966021 ACTAATTCTCTTCTAGATGAGACGC 58.034 40.000 28.82 0.00 40.09 5.19
1985 5316 9.796120 AAAACTAATTCTCTTCTAGATGAGACG 57.204 33.333 28.82 20.94 40.09 4.18
2019 5350 8.138712 CAGCTCCGTAACTAATTCTCTTCTTAT 58.861 37.037 0.00 0.00 0.00 1.73
2020 5351 7.481642 CAGCTCCGTAACTAATTCTCTTCTTA 58.518 38.462 0.00 0.00 0.00 2.10
2021 5352 6.334202 CAGCTCCGTAACTAATTCTCTTCTT 58.666 40.000 0.00 0.00 0.00 2.52
2022 5353 5.680151 GCAGCTCCGTAACTAATTCTCTTCT 60.680 44.000 0.00 0.00 0.00 2.85
2023 5354 4.504826 GCAGCTCCGTAACTAATTCTCTTC 59.495 45.833 0.00 0.00 0.00 2.87
2024 5355 4.160626 AGCAGCTCCGTAACTAATTCTCTT 59.839 41.667 0.00 0.00 0.00 2.85
2025 5356 3.702045 AGCAGCTCCGTAACTAATTCTCT 59.298 43.478 0.00 0.00 0.00 3.10
2026 5357 4.048241 AGCAGCTCCGTAACTAATTCTC 57.952 45.455 0.00 0.00 0.00 2.87
2027 5358 5.593679 TTAGCAGCTCCGTAACTAATTCT 57.406 39.130 0.00 0.00 0.00 2.40
2028 5359 6.702282 AGATTTAGCAGCTCCGTAACTAATTC 59.298 38.462 0.00 0.00 0.00 2.17
2029 5360 6.583562 AGATTTAGCAGCTCCGTAACTAATT 58.416 36.000 0.00 0.00 0.00 1.40
2030 5361 6.163135 AGATTTAGCAGCTCCGTAACTAAT 57.837 37.500 0.00 0.00 0.00 1.73
2031 5362 5.126545 TGAGATTTAGCAGCTCCGTAACTAA 59.873 40.000 0.00 0.00 0.00 2.24
2032 5363 4.643334 TGAGATTTAGCAGCTCCGTAACTA 59.357 41.667 0.00 0.00 0.00 2.24
2033 5364 3.447586 TGAGATTTAGCAGCTCCGTAACT 59.552 43.478 0.00 0.00 0.00 2.24
2034 5365 3.782046 TGAGATTTAGCAGCTCCGTAAC 58.218 45.455 0.00 0.00 0.00 2.50
2035 5366 3.447586 ACTGAGATTTAGCAGCTCCGTAA 59.552 43.478 0.00 0.00 35.57 3.18
2036 5367 3.024547 ACTGAGATTTAGCAGCTCCGTA 58.975 45.455 0.00 0.00 35.57 4.02
2037 5368 1.827969 ACTGAGATTTAGCAGCTCCGT 59.172 47.619 0.00 0.00 35.57 4.69
2038 5369 2.593346 ACTGAGATTTAGCAGCTCCG 57.407 50.000 0.00 0.00 35.57 4.63
2039 5370 3.620821 GTCAACTGAGATTTAGCAGCTCC 59.379 47.826 0.00 0.00 35.57 4.70
2040 5371 4.329528 CAGTCAACTGAGATTTAGCAGCTC 59.670 45.833 0.00 0.00 46.59 4.09
2041 5372 4.252073 CAGTCAACTGAGATTTAGCAGCT 58.748 43.478 4.05 0.00 46.59 4.24
2042 5373 4.596801 CAGTCAACTGAGATTTAGCAGC 57.403 45.455 4.05 0.00 46.59 5.25
2053 5384 7.631789 ACTTTGCGAAGTCTCAGTCAACTGA 62.632 44.000 13.90 12.07 45.04 3.41
2054 5385 2.140065 TGCGAAGTCTCAGTCAACTG 57.860 50.000 3.69 3.69 45.08 3.16
2055 5386 2.890808 TTGCGAAGTCTCAGTCAACT 57.109 45.000 0.00 0.00 0.00 3.16
2056 5387 2.866762 ACTTTGCGAAGTCTCAGTCAAC 59.133 45.455 13.90 0.00 42.35 3.18
2057 5388 3.179443 ACTTTGCGAAGTCTCAGTCAA 57.821 42.857 13.90 0.00 42.35 3.18
2058 5389 2.890808 ACTTTGCGAAGTCTCAGTCA 57.109 45.000 13.90 0.00 42.35 3.41
2067 5398 2.338813 CGTCGACTAAGACTTTGCGAAG 59.661 50.000 14.70 12.41 38.90 3.79
2068 5399 2.031769 TCGTCGACTAAGACTTTGCGAA 60.032 45.455 14.70 0.00 38.90 4.70
2069 5400 1.532437 TCGTCGACTAAGACTTTGCGA 59.468 47.619 14.70 10.29 38.90 5.10
2070 5401 1.905687 CTCGTCGACTAAGACTTTGCG 59.094 52.381 14.70 0.41 38.90 4.85
2071 5402 2.909863 GACTCGTCGACTAAGACTTTGC 59.090 50.000 14.70 0.00 38.90 3.68
2072 5403 4.143194 TGACTCGTCGACTAAGACTTTG 57.857 45.455 14.70 0.00 38.90 2.77
2073 5404 3.365164 GCTGACTCGTCGACTAAGACTTT 60.365 47.826 14.70 0.00 38.90 2.66
2074 5405 2.160022 GCTGACTCGTCGACTAAGACTT 59.840 50.000 14.70 0.00 38.90 3.01
2075 5406 1.733360 GCTGACTCGTCGACTAAGACT 59.267 52.381 14.70 0.00 38.90 3.24
2076 5407 1.202054 GGCTGACTCGTCGACTAAGAC 60.202 57.143 14.70 11.40 37.76 3.01
2077 5408 1.085091 GGCTGACTCGTCGACTAAGA 58.915 55.000 14.70 2.59 0.00 2.10
2078 5409 0.247735 CGGCTGACTCGTCGACTAAG 60.248 60.000 14.70 13.07 32.97 2.18
2079 5410 0.952497 ACGGCTGACTCGTCGACTAA 60.952 55.000 14.70 0.35 35.87 2.24
2080 5411 0.952497 AACGGCTGACTCGTCGACTA 60.952 55.000 14.70 0.95 40.18 2.59
2081 5412 2.259439 AACGGCTGACTCGTCGACT 61.259 57.895 14.70 0.00 40.18 4.18
2082 5413 2.081212 CAACGGCTGACTCGTCGAC 61.081 63.158 5.18 5.18 40.18 4.20
2083 5414 2.254350 CAACGGCTGACTCGTCGA 59.746 61.111 0.00 0.00 40.18 4.20
2084 5415 2.543687 ATCCAACGGCTGACTCGTCG 62.544 60.000 0.00 0.00 40.18 5.12
2085 5416 0.802607 GATCCAACGGCTGACTCGTC 60.803 60.000 0.00 0.00 40.18 4.20
2086 5417 1.215647 GATCCAACGGCTGACTCGT 59.784 57.895 0.00 0.00 43.14 4.18
2087 5418 1.874019 CGATCCAACGGCTGACTCG 60.874 63.158 0.00 0.00 0.00 4.18
2088 5419 0.389948 AACGATCCAACGGCTGACTC 60.390 55.000 0.00 0.00 37.61 3.36
2089 5420 0.034896 AAACGATCCAACGGCTGACT 59.965 50.000 0.00 0.00 37.61 3.41
2090 5421 0.165944 CAAACGATCCAACGGCTGAC 59.834 55.000 0.00 0.00 37.61 3.51
2091 5422 0.250124 ACAAACGATCCAACGGCTGA 60.250 50.000 0.00 0.00 37.61 4.26
2092 5423 0.591170 AACAAACGATCCAACGGCTG 59.409 50.000 0.00 0.00 37.61 4.85
2093 5424 0.872388 GAACAAACGATCCAACGGCT 59.128 50.000 0.00 0.00 37.61 5.52
2094 5425 0.452122 CGAACAAACGATCCAACGGC 60.452 55.000 0.00 0.00 37.61 5.68
2095 5426 0.452122 GCGAACAAACGATCCAACGG 60.452 55.000 0.00 0.00 37.61 4.44
2096 5427 0.511221 AGCGAACAAACGATCCAACG 59.489 50.000 0.00 0.00 39.31 4.10
2097 5428 2.477375 TGTAGCGAACAAACGATCCAAC 59.523 45.455 0.00 0.00 34.29 3.77
2098 5429 2.756829 TGTAGCGAACAAACGATCCAA 58.243 42.857 0.00 0.00 34.29 3.53
2099 5430 2.442212 TGTAGCGAACAAACGATCCA 57.558 45.000 0.00 0.00 34.29 3.41
2107 5438 2.156891 GCGTGAATCTTGTAGCGAACAA 59.843 45.455 7.35 7.35 45.90 2.83
2108 5439 1.724623 GCGTGAATCTTGTAGCGAACA 59.275 47.619 0.00 0.00 35.88 3.18
2109 5440 1.993370 AGCGTGAATCTTGTAGCGAAC 59.007 47.619 0.00 0.00 0.00 3.95
2110 5441 1.992667 CAGCGTGAATCTTGTAGCGAA 59.007 47.619 0.00 0.00 0.00 4.70
2111 5442 1.629013 CAGCGTGAATCTTGTAGCGA 58.371 50.000 0.00 0.00 0.00 4.93
2112 5443 0.647410 CCAGCGTGAATCTTGTAGCG 59.353 55.000 0.00 0.00 0.00 4.26
2113 5444 1.394917 CACCAGCGTGAATCTTGTAGC 59.605 52.381 0.00 0.00 43.14 3.58
2114 5445 2.413112 CACACCAGCGTGAATCTTGTAG 59.587 50.000 0.00 0.00 43.14 2.74
2115 5446 2.412870 CACACCAGCGTGAATCTTGTA 58.587 47.619 0.00 0.00 43.14 2.41
2116 5447 1.229428 CACACCAGCGTGAATCTTGT 58.771 50.000 0.00 0.00 43.14 3.16
2117 5448 0.110056 GCACACCAGCGTGAATCTTG 60.110 55.000 0.00 0.00 43.14 3.02
2118 5449 1.237285 GGCACACCAGCGTGAATCTT 61.237 55.000 0.00 0.00 43.14 2.40
2119 5450 1.672356 GGCACACCAGCGTGAATCT 60.672 57.895 0.00 0.00 43.14 2.40
2120 5451 1.672356 AGGCACACCAGCGTGAATC 60.672 57.895 0.00 0.00 43.14 2.52
2121 5452 2.431683 AGGCACACCAGCGTGAAT 59.568 55.556 0.00 0.00 43.14 2.57
2125 5456 4.626081 GGACAGGCACACCAGCGT 62.626 66.667 0.00 0.00 39.06 5.07
2126 5457 3.832237 AAGGACAGGCACACCAGCG 62.832 63.158 0.00 0.00 39.06 5.18
2127 5458 2.113986 AAGGACAGGCACACCAGC 59.886 61.111 0.00 0.00 39.06 4.85
2128 5459 0.466189 AACAAGGACAGGCACACCAG 60.466 55.000 0.00 0.00 39.06 4.00
2129 5460 0.033601 AAACAAGGACAGGCACACCA 60.034 50.000 0.00 0.00 39.06 4.17
2130 5461 1.880027 CTAAACAAGGACAGGCACACC 59.120 52.381 0.00 0.00 0.00 4.16
2142 5473 3.135994 ACGTTACACAGGCCTAAACAAG 58.864 45.455 3.98 0.00 0.00 3.16
2143 5474 3.196939 ACGTTACACAGGCCTAAACAA 57.803 42.857 3.98 0.00 0.00 2.83
2144 5475 2.914695 ACGTTACACAGGCCTAAACA 57.085 45.000 3.98 0.00 0.00 2.83
2145 5476 2.663119 CGTACGTTACACAGGCCTAAAC 59.337 50.000 3.98 7.16 0.00 2.01
2146 5477 2.352617 CCGTACGTTACACAGGCCTAAA 60.353 50.000 15.21 0.00 0.00 1.85
2147 5478 1.202114 CCGTACGTTACACAGGCCTAA 59.798 52.381 15.21 0.00 0.00 2.69
2148 5479 0.810648 CCGTACGTTACACAGGCCTA 59.189 55.000 15.21 0.00 0.00 3.93
2149 5480 0.895100 TCCGTACGTTACACAGGCCT 60.895 55.000 15.21 0.00 0.00 5.19
2150 5481 0.733909 GTCCGTACGTTACACAGGCC 60.734 60.000 15.21 0.00 0.00 5.19
2151 5482 0.733909 GGTCCGTACGTTACACAGGC 60.734 60.000 15.21 0.00 0.00 4.85
2152 5483 0.597568 TGGTCCGTACGTTACACAGG 59.402 55.000 15.21 0.00 0.00 4.00
2153 5484 1.973138 CTGGTCCGTACGTTACACAG 58.027 55.000 15.21 15.26 0.00 3.66
2154 5485 0.039256 GCTGGTCCGTACGTTACACA 60.039 55.000 15.21 10.61 0.00 3.72
2155 5486 0.733909 GGCTGGTCCGTACGTTACAC 60.734 60.000 15.21 5.03 0.00 2.90
2156 5487 1.586028 GGCTGGTCCGTACGTTACA 59.414 57.895 15.21 8.53 0.00 2.41
2157 5488 1.153765 GGGCTGGTCCGTACGTTAC 60.154 63.158 15.21 11.66 34.94 2.50
2158 5489 0.971959 ATGGGCTGGTCCGTACGTTA 60.972 55.000 15.21 0.00 34.94 3.18
2159 5490 1.833787 AATGGGCTGGTCCGTACGTT 61.834 55.000 15.21 0.00 34.94 3.99
2160 5491 1.833787 AAATGGGCTGGTCCGTACGT 61.834 55.000 15.21 0.00 34.94 3.57
2161 5492 1.078708 AAATGGGCTGGTCCGTACG 60.079 57.895 8.69 8.69 34.94 3.67
2162 5493 0.252197 AGAAATGGGCTGGTCCGTAC 59.748 55.000 0.00 0.00 34.94 3.67
2163 5494 0.539986 GAGAAATGGGCTGGTCCGTA 59.460 55.000 0.00 0.00 34.94 4.02
2164 5495 1.201429 AGAGAAATGGGCTGGTCCGT 61.201 55.000 0.00 0.00 34.94 4.69
2165 5496 0.035056 AAGAGAAATGGGCTGGTCCG 60.035 55.000 0.00 0.00 34.94 4.79
2166 5497 2.222227 AAAGAGAAATGGGCTGGTCC 57.778 50.000 0.00 0.00 0.00 4.46
2185 5516 1.616374 GTTGGAAGGCCGATGGAAAAA 59.384 47.619 0.00 0.00 36.79 1.94
2186 5517 1.203001 AGTTGGAAGGCCGATGGAAAA 60.203 47.619 0.00 0.00 36.79 2.29
2187 5518 0.404040 AGTTGGAAGGCCGATGGAAA 59.596 50.000 0.00 0.00 36.79 3.13
2188 5519 0.322456 CAGTTGGAAGGCCGATGGAA 60.322 55.000 0.00 0.00 36.79 3.53
2189 5520 1.299648 CAGTTGGAAGGCCGATGGA 59.700 57.895 0.00 0.00 36.79 3.41
2190 5521 0.609131 AACAGTTGGAAGGCCGATGG 60.609 55.000 0.00 0.00 36.79 3.51
2191 5522 0.523072 CAACAGTTGGAAGGCCGATG 59.477 55.000 5.25 0.00 36.79 3.84
2192 5523 0.110486 ACAACAGTTGGAAGGCCGAT 59.890 50.000 17.76 0.00 36.79 4.18
2193 5524 0.106918 AACAACAGTTGGAAGGCCGA 60.107 50.000 17.76 0.00 36.79 5.54
2194 5525 0.310854 GAACAACAGTTGGAAGGCCG 59.689 55.000 17.76 0.00 36.79 6.13
2195 5526 0.310854 CGAACAACAGTTGGAAGGCC 59.689 55.000 17.76 0.00 34.12 5.19
2196 5527 0.310854 CCGAACAACAGTTGGAAGGC 59.689 55.000 17.76 1.41 34.12 4.35
2197 5528 0.310854 GCCGAACAACAGTTGGAAGG 59.689 55.000 17.76 16.17 34.12 3.46
2198 5529 0.310854 GGCCGAACAACAGTTGGAAG 59.689 55.000 17.76 7.56 34.12 3.46
2199 5530 1.440938 CGGCCGAACAACAGTTGGAA 61.441 55.000 24.07 0.00 34.12 3.53
2200 5531 1.890041 CGGCCGAACAACAGTTGGA 60.890 57.895 24.07 0.00 34.12 3.53
2201 5532 1.440938 TTCGGCCGAACAACAGTTGG 61.441 55.000 35.81 0.00 34.12 3.77
2202 5533 0.378962 TTTCGGCCGAACAACAGTTG 59.621 50.000 38.87 12.03 33.41 3.16
2203 5534 1.265905 GATTTCGGCCGAACAACAGTT 59.734 47.619 38.87 17.51 33.41 3.16
2204 5535 0.872388 GATTTCGGCCGAACAACAGT 59.128 50.000 38.87 20.13 33.41 3.55
2205 5536 0.871722 TGATTTCGGCCGAACAACAG 59.128 50.000 38.87 1.04 33.41 3.16
2206 5537 1.529226 ATGATTTCGGCCGAACAACA 58.471 45.000 38.87 33.08 33.41 3.33
2207 5538 2.629639 AATGATTTCGGCCGAACAAC 57.370 45.000 38.87 29.25 33.41 3.32
2208 5539 4.974368 ATTAATGATTTCGGCCGAACAA 57.026 36.364 38.87 26.48 33.41 2.83
2209 5540 4.974368 AATTAATGATTTCGGCCGAACA 57.026 36.364 38.87 32.37 33.41 3.18
2210 5541 5.912955 CCTTAATTAATGATTTCGGCCGAAC 59.087 40.000 38.87 28.01 33.41 3.95
2211 5542 5.823570 TCCTTAATTAATGATTTCGGCCGAA 59.176 36.000 35.81 35.81 0.00 4.30
2212 5543 5.369833 TCCTTAATTAATGATTTCGGCCGA 58.630 37.500 27.28 27.28 0.00 5.54
2213 5544 5.238650 ACTCCTTAATTAATGATTTCGGCCG 59.761 40.000 22.12 22.12 0.00 6.13
2214 5545 6.635030 ACTCCTTAATTAATGATTTCGGCC 57.365 37.500 0.00 0.00 0.00 6.13
2215 5546 8.379457 AGTACTCCTTAATTAATGATTTCGGC 57.621 34.615 0.00 0.00 0.00 5.54
2216 5547 8.700644 CGAGTACTCCTTAATTAATGATTTCGG 58.299 37.037 17.23 0.00 0.00 4.30
2217 5548 9.245962 ACGAGTACTCCTTAATTAATGATTTCG 57.754 33.333 17.23 15.69 0.00 3.46
2220 5551 8.827677 GCAACGAGTACTCCTTAATTAATGATT 58.172 33.333 17.23 0.00 0.00 2.57
2221 5552 7.985184 TGCAACGAGTACTCCTTAATTAATGAT 59.015 33.333 17.23 0.00 0.00 2.45
2222 5553 7.324935 TGCAACGAGTACTCCTTAATTAATGA 58.675 34.615 17.23 0.74 0.00 2.57
2223 5554 7.534085 TGCAACGAGTACTCCTTAATTAATG 57.466 36.000 17.23 1.71 0.00 1.90
2224 5555 8.556213 TTTGCAACGAGTACTCCTTAATTAAT 57.444 30.769 17.23 0.00 0.00 1.40
2225 5556 7.874016 TCTTTGCAACGAGTACTCCTTAATTAA 59.126 33.333 17.23 0.00 0.00 1.40
2226 5557 7.380536 TCTTTGCAACGAGTACTCCTTAATTA 58.619 34.615 17.23 0.00 0.00 1.40
2227 5558 6.228258 TCTTTGCAACGAGTACTCCTTAATT 58.772 36.000 17.23 1.76 0.00 1.40
2228 5559 5.790593 TCTTTGCAACGAGTACTCCTTAAT 58.209 37.500 17.23 0.00 0.00 1.40
2229 5560 5.204409 TCTTTGCAACGAGTACTCCTTAA 57.796 39.130 17.23 2.08 0.00 1.85
2230 5561 4.859304 TCTTTGCAACGAGTACTCCTTA 57.141 40.909 17.23 0.00 0.00 2.69
2231 5562 3.746045 TCTTTGCAACGAGTACTCCTT 57.254 42.857 17.23 9.18 0.00 3.36
2232 5563 3.181469 TGTTCTTTGCAACGAGTACTCCT 60.181 43.478 17.23 2.73 0.00 3.69
2233 5564 3.059800 GTGTTCTTTGCAACGAGTACTCC 60.060 47.826 17.23 3.69 0.00 3.85
2234 5565 3.802685 AGTGTTCTTTGCAACGAGTACTC 59.197 43.478 13.18 13.18 0.00 2.59
2235 5566 3.793559 AGTGTTCTTTGCAACGAGTACT 58.206 40.909 14.37 14.37 0.00 2.73
2236 5567 3.059800 GGAGTGTTCTTTGCAACGAGTAC 60.060 47.826 0.00 6.11 0.00 2.73
2237 5568 3.128349 GGAGTGTTCTTTGCAACGAGTA 58.872 45.455 0.00 0.00 0.00 2.59
2238 5569 1.940613 GGAGTGTTCTTTGCAACGAGT 59.059 47.619 0.00 0.00 0.00 4.18
2239 5570 1.939934 TGGAGTGTTCTTTGCAACGAG 59.060 47.619 0.00 0.00 0.00 4.18
2240 5571 2.031258 TGGAGTGTTCTTTGCAACGA 57.969 45.000 0.00 0.00 0.00 3.85
2241 5572 2.549754 AGATGGAGTGTTCTTTGCAACG 59.450 45.455 0.00 0.00 0.00 4.10
2242 5573 4.574599 AAGATGGAGTGTTCTTTGCAAC 57.425 40.909 0.00 0.00 0.00 4.17
2243 5574 4.037923 GGAAAGATGGAGTGTTCTTTGCAA 59.962 41.667 10.71 0.00 44.73 4.08
2244 5575 3.569701 GGAAAGATGGAGTGTTCTTTGCA 59.430 43.478 10.71 0.00 44.73 4.08
2245 5576 3.569701 TGGAAAGATGGAGTGTTCTTTGC 59.430 43.478 9.19 9.19 45.25 3.68
2246 5577 4.217118 CCTGGAAAGATGGAGTGTTCTTTG 59.783 45.833 2.87 0.00 41.12 2.77
2247 5578 4.141158 ACCTGGAAAGATGGAGTGTTCTTT 60.141 41.667 0.00 0.00 43.12 2.52
2248 5579 3.395941 ACCTGGAAAGATGGAGTGTTCTT 59.604 43.478 0.00 0.00 33.69 2.52
2249 5580 2.982488 ACCTGGAAAGATGGAGTGTTCT 59.018 45.455 0.00 0.00 0.00 3.01
2250 5581 3.244561 TGACCTGGAAAGATGGAGTGTTC 60.245 47.826 0.00 0.00 0.00 3.18
2251 5582 2.711009 TGACCTGGAAAGATGGAGTGTT 59.289 45.455 0.00 0.00 0.00 3.32
2252 5583 2.039084 GTGACCTGGAAAGATGGAGTGT 59.961 50.000 0.00 0.00 0.00 3.55
2253 5584 2.704572 GTGACCTGGAAAGATGGAGTG 58.295 52.381 0.00 0.00 0.00 3.51
2254 5585 1.276421 CGTGACCTGGAAAGATGGAGT 59.724 52.381 0.00 0.00 0.00 3.85
2255 5586 1.550524 TCGTGACCTGGAAAGATGGAG 59.449 52.381 0.00 0.00 0.00 3.86
2256 5587 1.275291 GTCGTGACCTGGAAAGATGGA 59.725 52.381 0.00 0.00 0.00 3.41
2257 5588 1.001974 TGTCGTGACCTGGAAAGATGG 59.998 52.381 0.00 0.00 0.00 3.51
2258 5589 2.455674 TGTCGTGACCTGGAAAGATG 57.544 50.000 0.00 0.00 0.00 2.90
2259 5590 2.368875 ACTTGTCGTGACCTGGAAAGAT 59.631 45.455 0.00 0.00 0.00 2.40
2260 5591 1.760613 ACTTGTCGTGACCTGGAAAGA 59.239 47.619 0.00 0.00 0.00 2.52
2261 5592 1.867233 CACTTGTCGTGACCTGGAAAG 59.133 52.381 0.00 0.00 46.81 2.62
2262 5593 1.474320 CCACTTGTCGTGACCTGGAAA 60.474 52.381 0.00 0.00 46.81 3.13
2263 5594 0.105964 CCACTTGTCGTGACCTGGAA 59.894 55.000 0.00 0.00 46.81 3.53
2264 5595 1.745890 CCACTTGTCGTGACCTGGA 59.254 57.895 0.00 0.00 46.81 3.86
2265 5596 1.961277 GCCACTTGTCGTGACCTGG 60.961 63.158 0.00 0.00 46.81 4.45
2266 5597 2.310233 CGCCACTTGTCGTGACCTG 61.310 63.158 0.00 0.00 46.81 4.00
2267 5598 2.029073 CGCCACTTGTCGTGACCT 59.971 61.111 0.00 0.00 46.81 3.85
2268 5599 3.712881 GCGCCACTTGTCGTGACC 61.713 66.667 0.00 0.00 46.81 4.02
2269 5600 2.964925 TGCGCCACTTGTCGTGAC 60.965 61.111 4.18 0.00 46.81 3.67
2270 5601 2.964925 GTGCGCCACTTGTCGTGA 60.965 61.111 4.18 0.00 46.81 4.35
2271 5602 1.288419 TATGTGCGCCACTTGTCGTG 61.288 55.000 4.18 0.00 43.41 4.35
2272 5603 1.005512 TATGTGCGCCACTTGTCGT 60.006 52.632 4.18 0.00 35.11 4.34
2273 5604 1.288419 TGTATGTGCGCCACTTGTCG 61.288 55.000 4.18 0.00 35.11 4.35
2274 5605 0.443869 CTGTATGTGCGCCACTTGTC 59.556 55.000 4.18 1.50 35.11 3.18
2275 5606 1.577328 GCTGTATGTGCGCCACTTGT 61.577 55.000 4.18 0.00 35.11 3.16
2276 5607 1.135315 GCTGTATGTGCGCCACTTG 59.865 57.895 4.18 0.00 35.11 3.16
2277 5608 2.390599 CGCTGTATGTGCGCCACTT 61.391 57.895 4.18 4.32 46.72 3.16
2278 5609 2.815211 CGCTGTATGTGCGCCACT 60.815 61.111 4.18 0.00 46.72 4.00
2285 5616 2.390599 AAGTGGCGCGCTGTATGTG 61.391 57.895 32.29 0.00 0.00 3.21
2286 5617 2.047274 AAGTGGCGCGCTGTATGT 60.047 55.556 32.29 8.91 0.00 2.29
2287 5618 2.296692 GACAAGTGGCGCGCTGTATG 62.297 60.000 32.29 24.94 0.00 2.39
2288 5619 2.047274 ACAAGTGGCGCGCTGTAT 60.047 55.556 32.29 12.65 0.00 2.29
2289 5620 2.736995 GACAAGTGGCGCGCTGTA 60.737 61.111 32.29 15.13 0.00 2.74
2297 5628 2.639286 CAGGTTGCGACAAGTGGC 59.361 61.111 6.39 0.00 34.76 5.01
2298 5629 2.260869 CCCAGGTTGCGACAAGTGG 61.261 63.158 6.39 9.17 0.00 4.00
2299 5630 1.227823 TCCCAGGTTGCGACAAGTG 60.228 57.895 6.39 0.00 0.00 3.16
2300 5631 1.071471 CTCCCAGGTTGCGACAAGT 59.929 57.895 6.39 0.00 0.00 3.16
2301 5632 0.535102 AACTCCCAGGTTGCGACAAG 60.535 55.000 6.39 0.00 0.00 3.16
2302 5633 0.106918 AAACTCCCAGGTTGCGACAA 60.107 50.000 6.39 0.00 0.00 3.18
2303 5634 0.106918 AAAACTCCCAGGTTGCGACA 60.107 50.000 6.39 0.00 0.00 4.35
2304 5635 0.591659 GAAAACTCCCAGGTTGCGAC 59.408 55.000 0.00 0.00 0.00 5.19
2305 5636 0.472471 AGAAAACTCCCAGGTTGCGA 59.528 50.000 0.00 0.00 0.00 5.10
2306 5637 0.875059 GAGAAAACTCCCAGGTTGCG 59.125 55.000 0.00 0.00 0.00 4.85
2307 5638 2.278332 AGAGAAAACTCCCAGGTTGC 57.722 50.000 0.00 0.00 0.00 4.17
2308 5639 5.598416 AAAAAGAGAAAACTCCCAGGTTG 57.402 39.130 0.00 0.00 0.00 3.77
2354 5685 5.273523 ACGCACGGTTTAAGAGATAAAAC 57.726 39.130 0.00 0.00 37.75 2.43
2355 5686 4.389687 GGACGCACGGTTTAAGAGATAAAA 59.610 41.667 0.00 0.00 35.33 1.52
2356 5687 3.928375 GGACGCACGGTTTAAGAGATAAA 59.072 43.478 0.00 0.00 0.00 1.40
2357 5688 3.056678 TGGACGCACGGTTTAAGAGATAA 60.057 43.478 0.00 0.00 0.00 1.75
2358 5689 2.492881 TGGACGCACGGTTTAAGAGATA 59.507 45.455 0.00 0.00 0.00 1.98
2359 5690 1.274167 TGGACGCACGGTTTAAGAGAT 59.726 47.619 0.00 0.00 0.00 2.75
2360 5691 0.675083 TGGACGCACGGTTTAAGAGA 59.325 50.000 0.00 0.00 0.00 3.10
2361 5692 1.504359 TTGGACGCACGGTTTAAGAG 58.496 50.000 0.00 0.00 0.00 2.85
2362 5693 1.950828 TTTGGACGCACGGTTTAAGA 58.049 45.000 0.00 0.00 0.00 2.10
2363 5694 2.482721 AGATTTGGACGCACGGTTTAAG 59.517 45.455 0.00 0.00 0.00 1.85
2364 5695 2.481185 GAGATTTGGACGCACGGTTTAA 59.519 45.455 0.00 0.00 0.00 1.52
2365 5696 2.070783 GAGATTTGGACGCACGGTTTA 58.929 47.619 0.00 0.00 0.00 2.01
2366 5697 0.872388 GAGATTTGGACGCACGGTTT 59.128 50.000 0.00 0.00 0.00 3.27
2367 5698 0.250124 TGAGATTTGGACGCACGGTT 60.250 50.000 0.00 0.00 0.00 4.44
2368 5699 0.250124 TTGAGATTTGGACGCACGGT 60.250 50.000 0.00 0.00 0.00 4.83
2369 5700 0.871722 TTTGAGATTTGGACGCACGG 59.128 50.000 0.00 0.00 0.00 4.94
2370 5701 1.399727 GGTTTGAGATTTGGACGCACG 60.400 52.381 0.00 0.00 0.00 5.34
2371 5702 1.399727 CGGTTTGAGATTTGGACGCAC 60.400 52.381 0.00 0.00 0.00 5.34
2372 5703 0.871722 CGGTTTGAGATTTGGACGCA 59.128 50.000 0.00 0.00 0.00 5.24
2373 5704 0.872388 ACGGTTTGAGATTTGGACGC 59.128 50.000 0.00 0.00 0.00 5.19
2374 5705 3.619233 AAACGGTTTGAGATTTGGACG 57.381 42.857 5.12 0.00 0.00 4.79
2375 5706 4.738252 GTGAAAACGGTTTGAGATTTGGAC 59.262 41.667 1.45 0.00 0.00 4.02
2376 5707 4.202070 GGTGAAAACGGTTTGAGATTTGGA 60.202 41.667 1.45 0.00 0.00 3.53
2377 5708 4.048504 GGTGAAAACGGTTTGAGATTTGG 58.951 43.478 1.45 0.00 0.00 3.28
2378 5709 4.677584 TGGTGAAAACGGTTTGAGATTTG 58.322 39.130 1.45 0.00 0.00 2.32
2379 5710 4.993029 TGGTGAAAACGGTTTGAGATTT 57.007 36.364 1.45 0.00 0.00 2.17
2380 5711 5.288804 CAATGGTGAAAACGGTTTGAGATT 58.711 37.500 1.45 0.00 0.00 2.40
2381 5712 4.261994 CCAATGGTGAAAACGGTTTGAGAT 60.262 41.667 1.45 0.00 0.00 2.75
2382 5713 3.067461 CCAATGGTGAAAACGGTTTGAGA 59.933 43.478 1.45 0.00 0.00 3.27
2383 5714 3.067461 TCCAATGGTGAAAACGGTTTGAG 59.933 43.478 1.45 0.00 0.00 3.02
2384 5715 3.024547 TCCAATGGTGAAAACGGTTTGA 58.975 40.909 1.45 0.00 0.00 2.69
2385 5716 3.444703 TCCAATGGTGAAAACGGTTTG 57.555 42.857 1.45 0.00 0.00 2.93
2386 5717 4.502431 GGAATCCAATGGTGAAAACGGTTT 60.502 41.667 0.00 0.00 0.00 3.27
2387 5718 3.006430 GGAATCCAATGGTGAAAACGGTT 59.994 43.478 0.00 0.00 0.00 4.44
2388 5719 2.560981 GGAATCCAATGGTGAAAACGGT 59.439 45.455 0.00 0.00 0.00 4.83
2389 5720 2.825532 AGGAATCCAATGGTGAAAACGG 59.174 45.455 0.61 0.00 0.00 4.44
2390 5721 3.426159 CGAGGAATCCAATGGTGAAAACG 60.426 47.826 0.61 0.00 0.00 3.60
2391 5722 3.673323 GCGAGGAATCCAATGGTGAAAAC 60.673 47.826 0.61 0.00 0.00 2.43
2392 5723 2.491693 GCGAGGAATCCAATGGTGAAAA 59.508 45.455 0.61 0.00 0.00 2.29
2393 5724 2.091541 GCGAGGAATCCAATGGTGAAA 58.908 47.619 0.61 0.00 0.00 2.69
2394 5725 1.750193 GCGAGGAATCCAATGGTGAA 58.250 50.000 0.61 0.00 0.00 3.18
2395 5726 0.461870 CGCGAGGAATCCAATGGTGA 60.462 55.000 0.00 0.00 0.00 4.02
2396 5727 0.744414 ACGCGAGGAATCCAATGGTG 60.744 55.000 15.93 0.00 0.00 4.17
2397 5728 0.462047 GACGCGAGGAATCCAATGGT 60.462 55.000 15.93 0.00 0.00 3.55
2398 5729 1.490693 CGACGCGAGGAATCCAATGG 61.491 60.000 15.93 0.00 0.00 3.16
2399 5730 0.527600 TCGACGCGAGGAATCCAATG 60.528 55.000 15.93 0.00 0.00 2.82
2400 5731 1.813859 TCGACGCGAGGAATCCAAT 59.186 52.632 15.93 0.00 0.00 3.16
2401 5732 3.280211 TCGACGCGAGGAATCCAA 58.720 55.556 15.93 0.00 0.00 3.53
2410 5741 3.829948 AGTTTTAAAGATCTCGACGCGA 58.170 40.909 15.93 0.00 0.00 5.87
2411 5742 5.026462 TCTAGTTTTAAAGATCTCGACGCG 58.974 41.667 3.53 3.53 0.00 6.01
2412 5743 6.142639 GGATCTAGTTTTAAAGATCTCGACGC 59.857 42.308 12.45 0.00 44.94 5.19
2413 5744 6.637658 GGGATCTAGTTTTAAAGATCTCGACG 59.362 42.308 12.45 0.00 44.94 5.12
2414 5745 7.933728 GGGATCTAGTTTTAAAGATCTCGAC 57.066 40.000 12.45 0.00 44.94 4.20
2417 5748 9.620259 AACATGGGATCTAGTTTTAAAGATCTC 57.380 33.333 12.45 10.10 45.96 2.75
2418 5749 9.401058 CAACATGGGATCTAGTTTTAAAGATCT 57.599 33.333 12.45 0.00 44.94 2.75
2419 5750 9.396022 TCAACATGGGATCTAGTTTTAAAGATC 57.604 33.333 0.00 6.39 44.88 2.75
2420 5751 9.927081 ATCAACATGGGATCTAGTTTTAAAGAT 57.073 29.630 0.00 0.00 35.15 2.40
2423 5754 9.627123 CCTATCAACATGGGATCTAGTTTTAAA 57.373 33.333 5.52 0.00 32.06 1.52
2424 5755 8.778059 ACCTATCAACATGGGATCTAGTTTTAA 58.222 33.333 5.52 0.00 34.16 1.52
2425 5756 8.331931 ACCTATCAACATGGGATCTAGTTTTA 57.668 34.615 5.52 0.00 34.16 1.52
2426 5757 7.213178 ACCTATCAACATGGGATCTAGTTTT 57.787 36.000 5.52 0.00 34.16 2.43
2427 5758 6.831664 ACCTATCAACATGGGATCTAGTTT 57.168 37.500 5.52 0.00 34.16 2.66
2428 5759 6.831664 AACCTATCAACATGGGATCTAGTT 57.168 37.500 5.52 5.97 34.16 2.24
2429 5760 6.831664 AAACCTATCAACATGGGATCTAGT 57.168 37.500 5.52 0.98 34.16 2.57
2430 5761 7.227512 GTCAAAACCTATCAACATGGGATCTAG 59.772 40.741 5.52 0.40 34.16 2.43
2431 5762 7.054124 GTCAAAACCTATCAACATGGGATCTA 58.946 38.462 5.52 0.00 34.16 1.98
2432 5763 5.888161 GTCAAAACCTATCAACATGGGATCT 59.112 40.000 5.52 0.00 34.16 2.75
2433 5764 5.220854 CGTCAAAACCTATCAACATGGGATC 60.221 44.000 5.52 0.00 34.16 3.36
2434 5765 4.640201 CGTCAAAACCTATCAACATGGGAT 59.360 41.667 0.00 2.37 34.16 3.85
2435 5766 4.006989 CGTCAAAACCTATCAACATGGGA 58.993 43.478 0.00 0.00 34.16 4.37
2436 5767 4.006989 TCGTCAAAACCTATCAACATGGG 58.993 43.478 0.00 0.00 36.68 4.00
2437 5768 5.181245 AGTTCGTCAAAACCTATCAACATGG 59.819 40.000 0.00 0.00 0.00 3.66
2438 5769 6.241207 AGTTCGTCAAAACCTATCAACATG 57.759 37.500 0.00 0.00 0.00 3.21
2439 5770 6.877611 AAGTTCGTCAAAACCTATCAACAT 57.122 33.333 0.00 0.00 0.00 2.71
2440 5771 6.687081 AAAGTTCGTCAAAACCTATCAACA 57.313 33.333 0.00 0.00 0.00 3.33
2441 5772 7.980742 AAAAAGTTCGTCAAAACCTATCAAC 57.019 32.000 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.