Multiple sequence alignment - TraesCS5D01G490700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G490700 chr5D 100.000 2687 0 0 1 2687 525190231 525187545 0.000000e+00 4963.0
1 TraesCS5D01G490700 chr5D 79.451 910 109 34 851 1724 525216774 525215907 8.340000e-160 573.0
2 TraesCS5D01G490700 chr5D 84.895 523 55 8 1138 1645 525226903 525226390 8.580000e-140 507.0
3 TraesCS5D01G490700 chr5D 83.155 374 42 10 1138 1502 525388514 525388875 3.340000e-84 322.0
4 TraesCS5D01G490700 chr5D 82.877 292 39 6 1738 2020 526611141 526611430 4.440000e-63 252.0
5 TraesCS5D01G490700 chr5D 91.379 58 5 0 594 651 525227711 525227654 2.220000e-11 80.5
6 TraesCS5D01G490700 chr5B 86.292 1138 76 32 520 1612 659558167 659557065 0.000000e+00 1164.0
7 TraesCS5D01G490700 chr5B 84.067 1067 137 22 1611 2665 659556961 659555916 0.000000e+00 998.0
8 TraesCS5D01G490700 chr5B 82.609 598 71 15 1138 1723 659586810 659586234 5.170000e-137 497.0
9 TraesCS5D01G490700 chr5B 81.579 380 39 16 1138 1504 659748210 659748571 4.380000e-73 285.0
10 TraesCS5D01G490700 chr5B 82.759 290 40 6 1739 2022 32065233 32065518 1.600000e-62 250.0
11 TraesCS5D01G490700 chr5B 80.952 105 13 4 548 651 659587489 659587391 2.870000e-10 76.8
12 TraesCS5D01G490700 chr5A 86.988 976 88 19 1110 2054 651555995 651555028 0.000000e+00 1062.0
13 TraesCS5D01G490700 chr5A 81.805 698 81 18 1045 1712 651564462 651563781 6.540000e-151 544.0
14 TraesCS5D01G490700 chr5A 82.529 601 63 17 1138 1725 651569677 651569106 8.640000e-135 490.0
15 TraesCS5D01G490700 chr5A 84.773 440 32 15 492 904 651556551 651556120 2.490000e-110 409.0
16 TraesCS5D01G490700 chr5A 81.790 324 36 13 1182 1498 651755107 651755414 1.600000e-62 250.0
17 TraesCS5D01G490700 chr5A 88.889 180 14 5 2079 2252 651554838 651554659 1.620000e-52 217.0
18 TraesCS5D01G490700 chrUn 95.148 474 22 1 1 474 102698611 102699083 0.000000e+00 747.0
19 TraesCS5D01G490700 chrUn 83.103 290 39 6 1739 2022 404263710 404263995 3.430000e-64 255.0
20 TraesCS5D01G490700 chr6A 92.754 483 34 1 1 482 1809286 1808804 0.000000e+00 697.0
21 TraesCS5D01G490700 chr6A 91.649 479 38 2 1 478 2816709 2817186 0.000000e+00 662.0
22 TraesCS5D01G490700 chr6A 80.903 288 38 7 1750 2023 99059986 99060270 7.540000e-51 211.0
23 TraesCS5D01G490700 chr6A 80.242 248 43 6 2444 2687 609802488 609802733 5.910000e-42 182.0
24 TraesCS5D01G490700 chr3D 94.407 447 25 0 1 447 362884801 362884355 0.000000e+00 688.0
25 TraesCS5D01G490700 chr4B 93.274 446 30 0 1 446 535301891 535301446 0.000000e+00 658.0
26 TraesCS5D01G490700 chr1B 93.274 446 30 0 1 446 647593364 647593809 0.000000e+00 658.0
27 TraesCS5D01G490700 chr1B 93.049 446 31 0 1 446 625716514 625716069 0.000000e+00 652.0
28 TraesCS5D01G490700 chr1B 82.456 228 28 7 2465 2687 656519517 656519737 3.530000e-44 189.0
29 TraesCS5D01G490700 chr3B 93.049 446 31 0 1 446 819841204 819840759 0.000000e+00 652.0
30 TraesCS5D01G490700 chr2D 90.722 485 39 6 1 480 551915837 551916320 2.260000e-180 641.0
31 TraesCS5D01G490700 chr2D 81.395 301 39 12 1739 2028 22770942 22771236 2.080000e-56 230.0
32 TraesCS5D01G490700 chr7D 81.352 429 71 7 2262 2687 362377016 362377438 9.210000e-90 340.0
33 TraesCS5D01G490700 chr2B 81.849 292 40 5 1739 2023 523090396 523090111 1.610000e-57 233.0
34 TraesCS5D01G490700 chr2B 80.565 283 42 9 1738 2011 2965783 2965505 3.510000e-49 206.0
35 TraesCS5D01G490700 chr2B 80.682 88 15 2 1739 1825 288364335 288364249 1.730000e-07 67.6
36 TraesCS5D01G490700 chr6B 80.936 299 43 9 1735 2023 693905992 693906286 9.680000e-55 224.0
37 TraesCS5D01G490700 chr2A 83.475 236 35 3 1788 2023 19098099 19098330 1.620000e-52 217.0
38 TraesCS5D01G490700 chr2A 79.352 247 42 8 2448 2687 19595293 19595537 5.950000e-37 165.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G490700 chr5D 525187545 525190231 2686 True 4963.000000 4963 100.000000 1 2687 1 chr5D.!!$R1 2686
1 TraesCS5D01G490700 chr5D 525215907 525216774 867 True 573.000000 573 79.451000 851 1724 1 chr5D.!!$R2 873
2 TraesCS5D01G490700 chr5D 525226390 525227711 1321 True 293.750000 507 88.137000 594 1645 2 chr5D.!!$R3 1051
3 TraesCS5D01G490700 chr5B 659555916 659558167 2251 True 1081.000000 1164 85.179500 520 2665 2 chr5B.!!$R1 2145
4 TraesCS5D01G490700 chr5B 659586234 659587489 1255 True 286.900000 497 81.780500 548 1723 2 chr5B.!!$R2 1175
5 TraesCS5D01G490700 chr5A 651554659 651556551 1892 True 562.666667 1062 86.883333 492 2252 3 chr5A.!!$R3 1760
6 TraesCS5D01G490700 chr5A 651563781 651564462 681 True 544.000000 544 81.805000 1045 1712 1 chr5A.!!$R1 667
7 TraesCS5D01G490700 chr5A 651569106 651569677 571 True 490.000000 490 82.529000 1138 1725 1 chr5A.!!$R2 587

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
132 133 0.032117 TGAGATCGAGGGTGATGGGT 60.032 55.0 0.0 0.0 0.0 4.51 F
990 1352 0.106769 ACACCAACCATGCTCACACA 60.107 50.0 0.0 0.0 0.0 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1382 1869 0.324943 TAGCACTCTTGGGCTTGACC 59.675 55.0 0.00 0.00 41.41 4.02 R
2312 3128 0.039978 CTACCGCCAGATCGCAGTAG 60.040 60.0 2.76 2.76 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.933021 CCATTGGGGATCATGGGATG 58.067 55.000 2.48 0.00 40.01 3.51
20 21 1.551560 CCATTGGGGATCATGGGATGG 60.552 57.143 2.48 2.00 40.01 3.51
21 22 0.115745 ATTGGGGATCATGGGATGGC 59.884 55.000 0.00 0.00 32.67 4.40
22 23 1.295170 TTGGGGATCATGGGATGGCA 61.295 55.000 0.00 0.00 32.67 4.92
23 24 1.076192 GGGGATCATGGGATGGCAG 59.924 63.158 0.00 0.00 32.67 4.85
24 25 1.605738 GGGATCATGGGATGGCAGC 60.606 63.158 0.00 0.00 32.67 5.25
25 26 1.152138 GGATCATGGGATGGCAGCA 59.848 57.895 4.64 0.00 32.67 4.41
26 27 1.177256 GGATCATGGGATGGCAGCAC 61.177 60.000 4.64 0.00 32.67 4.40
27 28 1.512996 GATCATGGGATGGCAGCACG 61.513 60.000 4.64 0.00 32.67 5.34
28 29 2.971095 ATCATGGGATGGCAGCACGG 62.971 60.000 4.64 0.00 30.86 4.94
47 48 4.612412 GGTGGCGTTGACGTGGGA 62.612 66.667 0.00 0.00 42.22 4.37
48 49 3.041940 GTGGCGTTGACGTGGGAG 61.042 66.667 0.00 0.00 42.22 4.30
49 50 4.980805 TGGCGTTGACGTGGGAGC 62.981 66.667 0.00 0.00 42.22 4.70
52 53 2.355363 CGTTGACGTGGGAGCGAA 60.355 61.111 0.00 0.00 35.59 4.70
53 54 2.372690 CGTTGACGTGGGAGCGAAG 61.373 63.158 0.00 0.00 35.59 3.79
54 55 1.006571 GTTGACGTGGGAGCGAAGA 60.007 57.895 0.00 0.00 35.59 2.87
55 56 0.389948 GTTGACGTGGGAGCGAAGAT 60.390 55.000 0.00 0.00 35.59 2.40
56 57 0.320374 TTGACGTGGGAGCGAAGATT 59.680 50.000 0.00 0.00 35.59 2.40
57 58 0.389817 TGACGTGGGAGCGAAGATTG 60.390 55.000 0.00 0.00 35.59 2.67
58 59 1.696832 GACGTGGGAGCGAAGATTGC 61.697 60.000 0.00 0.00 35.59 3.56
59 60 1.741401 CGTGGGAGCGAAGATTGCA 60.741 57.895 0.00 0.00 33.85 4.08
60 61 1.699656 CGTGGGAGCGAAGATTGCAG 61.700 60.000 0.00 0.00 33.85 4.41
61 62 1.746615 TGGGAGCGAAGATTGCAGC 60.747 57.895 0.00 0.00 33.85 5.25
62 63 2.705826 GGAGCGAAGATTGCAGCG 59.294 61.111 0.00 0.00 33.85 5.18
65 66 4.543084 GCGAAGATTGCAGCGCCC 62.543 66.667 2.29 0.00 43.33 6.13
66 67 4.228097 CGAAGATTGCAGCGCCCG 62.228 66.667 2.29 0.00 0.00 6.13
67 68 2.819595 GAAGATTGCAGCGCCCGA 60.820 61.111 2.29 0.00 0.00 5.14
68 69 2.817423 GAAGATTGCAGCGCCCGAG 61.817 63.158 2.29 0.00 0.00 4.63
69 70 4.845580 AGATTGCAGCGCCCGAGG 62.846 66.667 2.29 0.00 0.00 4.63
75 76 4.379243 CAGCGCCCGAGGTGAACT 62.379 66.667 2.29 0.00 41.72 3.01
76 77 3.626924 AGCGCCCGAGGTGAACTT 61.627 61.111 2.29 0.00 34.74 2.66
77 78 3.119096 GCGCCCGAGGTGAACTTC 61.119 66.667 0.00 0.00 34.74 3.01
78 79 2.809601 CGCCCGAGGTGAACTTCG 60.810 66.667 7.89 7.89 43.79 3.79
79 80 2.654877 GCCCGAGGTGAACTTCGA 59.345 61.111 15.56 0.00 46.53 3.71
80 81 1.005394 GCCCGAGGTGAACTTCGAA 60.005 57.895 15.56 0.00 46.53 3.71
81 82 1.014564 GCCCGAGGTGAACTTCGAAG 61.015 60.000 23.43 23.43 46.53 3.79
82 83 0.601558 CCCGAGGTGAACTTCGAAGA 59.398 55.000 31.08 6.55 46.53 2.87
83 84 1.402984 CCCGAGGTGAACTTCGAAGAG 60.403 57.143 31.08 7.44 46.53 2.85
84 85 1.402984 CCGAGGTGAACTTCGAAGAGG 60.403 57.143 31.08 15.15 46.53 3.69
91 92 2.815647 CTTCGAAGAGGTGGCGCC 60.816 66.667 22.73 22.73 38.43 6.53
92 93 3.589654 CTTCGAAGAGGTGGCGCCA 62.590 63.158 29.03 29.03 38.43 5.69
93 94 3.171828 TTCGAAGAGGTGGCGCCAA 62.172 57.895 34.66 13.29 38.43 4.52
94 95 2.436646 CGAAGAGGTGGCGCCAAT 60.437 61.111 34.66 23.93 40.61 3.16
95 96 2.753966 CGAAGAGGTGGCGCCAATG 61.754 63.158 34.66 11.95 40.61 2.82
96 97 2.361610 AAGAGGTGGCGCCAATGG 60.362 61.111 34.66 0.00 40.61 3.16
97 98 3.210012 AAGAGGTGGCGCCAATGGT 62.210 57.895 34.66 16.27 40.61 3.55
98 99 1.847798 AAGAGGTGGCGCCAATGGTA 61.848 55.000 34.66 3.51 40.61 3.25
99 100 1.819632 GAGGTGGCGCCAATGGTAG 60.820 63.158 34.66 0.00 40.61 3.18
100 101 2.045340 GGTGGCGCCAATGGTAGT 60.045 61.111 34.66 0.00 37.17 2.73
101 102 1.222387 GGTGGCGCCAATGGTAGTA 59.778 57.895 34.66 0.58 37.17 1.82
102 103 0.814010 GGTGGCGCCAATGGTAGTAG 60.814 60.000 34.66 0.00 37.17 2.57
103 104 0.107848 GTGGCGCCAATGGTAGTAGT 60.108 55.000 34.66 0.00 0.00 2.73
104 105 0.616371 TGGCGCCAATGGTAGTAGTT 59.384 50.000 30.74 0.00 0.00 2.24
105 106 1.014352 GGCGCCAATGGTAGTAGTTG 58.986 55.000 24.80 0.00 0.00 3.16
106 107 1.677820 GGCGCCAATGGTAGTAGTTGT 60.678 52.381 24.80 0.00 0.00 3.32
107 108 1.396996 GCGCCAATGGTAGTAGTTGTG 59.603 52.381 0.00 0.00 0.00 3.33
108 109 2.006888 CGCCAATGGTAGTAGTTGTGG 58.993 52.381 0.00 0.00 0.00 4.17
109 110 2.365582 GCCAATGGTAGTAGTTGTGGG 58.634 52.381 0.00 0.00 0.00 4.61
110 111 2.026636 GCCAATGGTAGTAGTTGTGGGA 60.027 50.000 0.00 0.00 0.00 4.37
111 112 3.873910 CCAATGGTAGTAGTTGTGGGAG 58.126 50.000 0.00 0.00 0.00 4.30
112 113 3.263425 CCAATGGTAGTAGTTGTGGGAGT 59.737 47.826 0.00 0.00 0.00 3.85
113 114 4.263331 CCAATGGTAGTAGTTGTGGGAGTT 60.263 45.833 0.00 0.00 0.00 3.01
114 115 4.553330 ATGGTAGTAGTTGTGGGAGTTG 57.447 45.455 0.00 0.00 0.00 3.16
115 116 3.578978 TGGTAGTAGTTGTGGGAGTTGA 58.421 45.455 0.00 0.00 0.00 3.18
116 117 3.576982 TGGTAGTAGTTGTGGGAGTTGAG 59.423 47.826 0.00 0.00 0.00 3.02
117 118 3.830755 GGTAGTAGTTGTGGGAGTTGAGA 59.169 47.826 0.00 0.00 0.00 3.27
118 119 4.466726 GGTAGTAGTTGTGGGAGTTGAGAT 59.533 45.833 0.00 0.00 0.00 2.75
119 120 4.810191 AGTAGTTGTGGGAGTTGAGATC 57.190 45.455 0.00 0.00 0.00 2.75
120 121 2.751166 AGTTGTGGGAGTTGAGATCG 57.249 50.000 0.00 0.00 0.00 3.69
121 122 2.248248 AGTTGTGGGAGTTGAGATCGA 58.752 47.619 0.00 0.00 0.00 3.59
122 123 2.232452 AGTTGTGGGAGTTGAGATCGAG 59.768 50.000 0.00 0.00 0.00 4.04
123 124 1.186200 TGTGGGAGTTGAGATCGAGG 58.814 55.000 0.00 0.00 0.00 4.63
124 125 0.461961 GTGGGAGTTGAGATCGAGGG 59.538 60.000 0.00 0.00 0.00 4.30
125 126 0.041238 TGGGAGTTGAGATCGAGGGT 59.959 55.000 0.00 0.00 0.00 4.34
126 127 0.461961 GGGAGTTGAGATCGAGGGTG 59.538 60.000 0.00 0.00 0.00 4.61
127 128 1.475403 GGAGTTGAGATCGAGGGTGA 58.525 55.000 0.00 0.00 0.00 4.02
128 129 2.035632 GGAGTTGAGATCGAGGGTGAT 58.964 52.381 0.00 0.00 0.00 3.06
129 130 2.223923 GGAGTTGAGATCGAGGGTGATG 60.224 54.545 0.00 0.00 0.00 3.07
130 131 1.759445 AGTTGAGATCGAGGGTGATGG 59.241 52.381 0.00 0.00 0.00 3.51
131 132 1.123077 TTGAGATCGAGGGTGATGGG 58.877 55.000 0.00 0.00 0.00 4.00
132 133 0.032117 TGAGATCGAGGGTGATGGGT 60.032 55.000 0.00 0.00 0.00 4.51
133 134 1.216930 TGAGATCGAGGGTGATGGGTA 59.783 52.381 0.00 0.00 0.00 3.69
134 135 2.158310 TGAGATCGAGGGTGATGGGTAT 60.158 50.000 0.00 0.00 0.00 2.73
135 136 3.075432 TGAGATCGAGGGTGATGGGTATA 59.925 47.826 0.00 0.00 0.00 1.47
136 137 4.264397 TGAGATCGAGGGTGATGGGTATAT 60.264 45.833 0.00 0.00 0.00 0.86
137 138 5.044402 TGAGATCGAGGGTGATGGGTATATA 60.044 44.000 0.00 0.00 0.00 0.86
138 139 5.450453 AGATCGAGGGTGATGGGTATATAG 58.550 45.833 0.00 0.00 0.00 1.31
139 140 3.977312 TCGAGGGTGATGGGTATATAGG 58.023 50.000 0.00 0.00 0.00 2.57
140 141 3.031736 CGAGGGTGATGGGTATATAGGG 58.968 54.545 0.00 0.00 0.00 3.53
141 142 3.309629 CGAGGGTGATGGGTATATAGGGA 60.310 52.174 0.00 0.00 0.00 4.20
142 143 4.031611 GAGGGTGATGGGTATATAGGGAC 58.968 52.174 0.00 0.00 0.00 4.46
143 144 3.673152 AGGGTGATGGGTATATAGGGACT 59.327 47.826 0.00 0.00 46.37 3.85
161 162 7.648039 AGGGACTAATATCGGAGATTGTATC 57.352 40.000 8.06 3.23 38.45 2.24
162 163 6.319152 AGGGACTAATATCGGAGATTGTATCG 59.681 42.308 8.06 0.00 38.45 2.92
163 164 6.459848 GGGACTAATATCGGAGATTGTATCGG 60.460 46.154 8.06 0.00 45.12 4.18
164 165 5.892568 ACTAATATCGGAGATTGTATCGGC 58.107 41.667 8.06 0.00 45.12 5.54
165 166 2.913777 TATCGGAGATTGTATCGGCG 57.086 50.000 0.00 0.00 45.12 6.46
166 167 1.244816 ATCGGAGATTGTATCGGCGA 58.755 50.000 13.87 13.87 45.12 5.54
167 168 1.026584 TCGGAGATTGTATCGGCGAA 58.973 50.000 15.93 0.00 0.00 4.70
168 169 1.001706 TCGGAGATTGTATCGGCGAAG 60.002 52.381 15.93 0.00 0.00 3.79
169 170 1.784525 GGAGATTGTATCGGCGAAGG 58.215 55.000 15.93 0.00 0.00 3.46
170 171 1.340248 GGAGATTGTATCGGCGAAGGA 59.660 52.381 15.93 0.00 0.00 3.36
171 172 2.608261 GGAGATTGTATCGGCGAAGGAG 60.608 54.545 15.93 0.00 0.00 3.69
172 173 2.293677 GAGATTGTATCGGCGAAGGAGA 59.706 50.000 15.93 0.00 0.00 3.71
173 174 2.894126 AGATTGTATCGGCGAAGGAGAT 59.106 45.455 15.93 4.70 0.00 2.75
174 175 2.795175 TTGTATCGGCGAAGGAGATC 57.205 50.000 15.93 0.16 0.00 2.75
175 176 1.687563 TGTATCGGCGAAGGAGATCA 58.312 50.000 15.93 2.91 0.00 2.92
176 177 1.337071 TGTATCGGCGAAGGAGATCAC 59.663 52.381 15.93 2.74 0.00 3.06
177 178 0.591659 TATCGGCGAAGGAGATCACG 59.408 55.000 15.93 0.00 0.00 4.35
178 179 2.076622 ATCGGCGAAGGAGATCACGG 62.077 60.000 15.93 0.00 0.00 4.94
179 180 2.107141 GGCGAAGGAGATCACGGG 59.893 66.667 0.00 0.00 0.00 5.28
180 181 2.107141 GCGAAGGAGATCACGGGG 59.893 66.667 0.00 0.00 0.00 5.73
181 182 2.815308 CGAAGGAGATCACGGGGG 59.185 66.667 0.00 0.00 0.00 5.40
195 196 3.021263 GGGGGCATAGGTGGTGGT 61.021 66.667 0.00 0.00 0.00 4.16
196 197 2.275418 GGGGCATAGGTGGTGGTG 59.725 66.667 0.00 0.00 0.00 4.17
197 198 2.275418 GGGCATAGGTGGTGGTGG 59.725 66.667 0.00 0.00 0.00 4.61
198 199 2.612493 GGGCATAGGTGGTGGTGGT 61.612 63.158 0.00 0.00 0.00 4.16
199 200 1.276140 GGGCATAGGTGGTGGTGGTA 61.276 60.000 0.00 0.00 0.00 3.25
200 201 0.180406 GGCATAGGTGGTGGTGGTAG 59.820 60.000 0.00 0.00 0.00 3.18
201 202 1.200519 GCATAGGTGGTGGTGGTAGA 58.799 55.000 0.00 0.00 0.00 2.59
202 203 1.139058 GCATAGGTGGTGGTGGTAGAG 59.861 57.143 0.00 0.00 0.00 2.43
203 204 1.139058 CATAGGTGGTGGTGGTAGAGC 59.861 57.143 0.00 0.00 0.00 4.09
204 205 0.412244 TAGGTGGTGGTGGTAGAGCT 59.588 55.000 0.00 0.00 0.00 4.09
205 206 0.412244 AGGTGGTGGTGGTAGAGCTA 59.588 55.000 0.00 0.00 0.00 3.32
206 207 0.824759 GGTGGTGGTGGTAGAGCTAG 59.175 60.000 0.00 0.00 0.00 3.42
207 208 0.824759 GTGGTGGTGGTAGAGCTAGG 59.175 60.000 0.00 0.00 0.00 3.02
208 209 0.325296 TGGTGGTGGTAGAGCTAGGG 60.325 60.000 0.00 0.00 0.00 3.53
209 210 0.325390 GGTGGTGGTAGAGCTAGGGT 60.325 60.000 0.00 0.00 0.00 4.34
210 211 1.063417 GGTGGTGGTAGAGCTAGGGTA 60.063 57.143 0.00 0.00 0.00 3.69
211 212 2.308690 GTGGTGGTAGAGCTAGGGTAG 58.691 57.143 0.00 0.00 0.00 3.18
212 213 2.091994 GTGGTGGTAGAGCTAGGGTAGA 60.092 54.545 0.00 0.00 0.00 2.59
213 214 2.175069 TGGTGGTAGAGCTAGGGTAGAG 59.825 54.545 0.00 0.00 0.00 2.43
214 215 2.489437 GGTGGTAGAGCTAGGGTAGAGG 60.489 59.091 0.00 0.00 0.00 3.69
215 216 2.442502 GTGGTAGAGCTAGGGTAGAGGA 59.557 54.545 0.00 0.00 0.00 3.71
216 217 2.712087 TGGTAGAGCTAGGGTAGAGGAG 59.288 54.545 0.00 0.00 0.00 3.69
217 218 2.040679 GGTAGAGCTAGGGTAGAGGAGG 59.959 59.091 0.00 0.00 0.00 4.30
218 219 2.215979 AGAGCTAGGGTAGAGGAGGA 57.784 55.000 0.00 0.00 0.00 3.71
219 220 2.062636 AGAGCTAGGGTAGAGGAGGAG 58.937 57.143 0.00 0.00 0.00 3.69
220 221 1.074889 GAGCTAGGGTAGAGGAGGAGG 59.925 61.905 0.00 0.00 0.00 4.30
221 222 1.150872 GCTAGGGTAGAGGAGGAGGA 58.849 60.000 0.00 0.00 0.00 3.71
222 223 1.499870 GCTAGGGTAGAGGAGGAGGAA 59.500 57.143 0.00 0.00 0.00 3.36
223 224 2.490168 GCTAGGGTAGAGGAGGAGGAAG 60.490 59.091 0.00 0.00 0.00 3.46
224 225 0.263468 AGGGTAGAGGAGGAGGAAGC 59.737 60.000 0.00 0.00 0.00 3.86
225 226 0.761323 GGGTAGAGGAGGAGGAAGCC 60.761 65.000 0.00 0.00 0.00 4.35
226 227 1.110518 GGTAGAGGAGGAGGAAGCCG 61.111 65.000 0.00 0.00 0.00 5.52
227 228 0.396001 GTAGAGGAGGAGGAAGCCGT 60.396 60.000 0.00 0.00 0.00 5.68
228 229 0.395862 TAGAGGAGGAGGAAGCCGTG 60.396 60.000 0.00 0.00 0.00 4.94
229 230 2.685380 AGGAGGAGGAAGCCGTGG 60.685 66.667 0.00 0.00 0.00 4.94
230 231 4.475135 GGAGGAGGAAGCCGTGGC 62.475 72.222 1.67 1.67 42.33 5.01
322 323 1.254954 CGGAGCCATACCCTAGTACC 58.745 60.000 0.00 0.00 0.00 3.34
323 324 1.479942 CGGAGCCATACCCTAGTACCA 60.480 57.143 0.00 0.00 0.00 3.25
324 325 2.249139 GGAGCCATACCCTAGTACCAG 58.751 57.143 0.00 0.00 0.00 4.00
325 326 2.249139 GAGCCATACCCTAGTACCAGG 58.751 57.143 0.00 0.00 35.26 4.45
326 327 1.864251 AGCCATACCCTAGTACCAGGA 59.136 52.381 9.15 0.00 38.00 3.86
327 328 2.249214 AGCCATACCCTAGTACCAGGAA 59.751 50.000 9.15 0.00 38.00 3.36
328 329 2.367894 GCCATACCCTAGTACCAGGAAC 59.632 54.545 9.15 0.00 38.00 3.62
329 330 3.924922 CCATACCCTAGTACCAGGAACT 58.075 50.000 9.15 0.00 38.00 3.01
330 331 3.896272 CCATACCCTAGTACCAGGAACTC 59.104 52.174 9.15 0.00 38.00 3.01
331 332 4.387664 CCATACCCTAGTACCAGGAACTCT 60.388 50.000 9.15 0.00 38.00 3.24
332 333 5.163012 CCATACCCTAGTACCAGGAACTCTA 60.163 48.000 9.15 0.00 38.00 2.43
333 334 4.961440 ACCCTAGTACCAGGAACTCTAA 57.039 45.455 9.15 0.00 38.00 2.10
334 335 4.869451 ACCCTAGTACCAGGAACTCTAAG 58.131 47.826 9.15 0.00 38.00 2.18
335 336 4.543337 ACCCTAGTACCAGGAACTCTAAGA 59.457 45.833 9.15 0.00 38.00 2.10
336 337 5.196165 ACCCTAGTACCAGGAACTCTAAGAT 59.804 44.000 9.15 0.00 38.00 2.40
337 338 6.392245 ACCCTAGTACCAGGAACTCTAAGATA 59.608 42.308 9.15 0.00 38.00 1.98
338 339 6.716173 CCCTAGTACCAGGAACTCTAAGATAC 59.284 46.154 9.15 0.00 38.00 2.24
339 340 6.716173 CCTAGTACCAGGAACTCTAAGATACC 59.284 46.154 0.22 0.00 38.00 2.73
340 341 6.088541 AGTACCAGGAACTCTAAGATACCA 57.911 41.667 0.00 0.00 34.60 3.25
341 342 6.684538 AGTACCAGGAACTCTAAGATACCAT 58.315 40.000 0.00 0.00 34.60 3.55
342 343 5.878406 ACCAGGAACTCTAAGATACCATG 57.122 43.478 0.00 0.00 34.60 3.66
343 344 5.281314 ACCAGGAACTCTAAGATACCATGT 58.719 41.667 0.00 0.00 34.60 3.21
344 345 6.441222 ACCAGGAACTCTAAGATACCATGTA 58.559 40.000 0.00 0.00 34.60 2.29
345 346 6.901300 ACCAGGAACTCTAAGATACCATGTAA 59.099 38.462 0.00 0.00 34.60 2.41
346 347 7.070074 ACCAGGAACTCTAAGATACCATGTAAG 59.930 40.741 0.00 0.00 34.60 2.34
347 348 6.926272 CAGGAACTCTAAGATACCATGTAAGC 59.074 42.308 0.00 0.00 34.60 3.09
348 349 6.841755 AGGAACTCTAAGATACCATGTAAGCT 59.158 38.462 0.00 0.00 0.00 3.74
349 350 7.345914 AGGAACTCTAAGATACCATGTAAGCTT 59.654 37.037 3.48 3.48 0.00 3.74
350 351 7.988028 GGAACTCTAAGATACCATGTAAGCTTT 59.012 37.037 3.20 0.00 0.00 3.51
351 352 8.723942 AACTCTAAGATACCATGTAAGCTTTG 57.276 34.615 3.20 0.00 0.00 2.77
352 353 8.079211 ACTCTAAGATACCATGTAAGCTTTGA 57.921 34.615 3.20 4.18 0.00 2.69
353 354 8.540388 ACTCTAAGATACCATGTAAGCTTTGAA 58.460 33.333 3.20 0.00 0.00 2.69
354 355 9.553064 CTCTAAGATACCATGTAAGCTTTGAAT 57.447 33.333 3.20 0.00 0.00 2.57
381 382 8.716646 AAACTATTGTTATTAATTTGCTGGCC 57.283 30.769 0.00 0.00 34.96 5.36
382 383 6.503524 ACTATTGTTATTAATTTGCTGGCCG 58.496 36.000 0.00 0.00 0.00 6.13
383 384 3.157932 TGTTATTAATTTGCTGGCCGC 57.842 42.857 11.92 11.92 39.77 6.53
414 415 8.996271 AGCGGTATATATAAAAGTTTACAAGCC 58.004 33.333 0.00 0.00 0.00 4.35
415 416 8.776470 GCGGTATATATAAAAGTTTACAAGCCA 58.224 33.333 0.00 0.00 0.00 4.75
423 424 6.387041 AAAAGTTTACAAGCCAAGTAGACC 57.613 37.500 0.00 0.00 29.55 3.85
424 425 4.976540 AGTTTACAAGCCAAGTAGACCT 57.023 40.909 0.00 0.00 29.55 3.85
425 426 6.429521 AAGTTTACAAGCCAAGTAGACCTA 57.570 37.500 0.00 0.00 29.55 3.08
426 427 6.622427 AGTTTACAAGCCAAGTAGACCTAT 57.378 37.500 0.00 0.00 29.55 2.57
427 428 7.017319 AGTTTACAAGCCAAGTAGACCTATT 57.983 36.000 0.00 0.00 29.55 1.73
428 429 8.142485 AGTTTACAAGCCAAGTAGACCTATTA 57.858 34.615 0.00 0.00 29.55 0.98
429 430 8.039538 AGTTTACAAGCCAAGTAGACCTATTAC 58.960 37.037 0.00 0.00 29.55 1.89
430 431 7.484993 TTACAAGCCAAGTAGACCTATTACA 57.515 36.000 0.00 0.00 0.00 2.41
431 432 6.368779 ACAAGCCAAGTAGACCTATTACAA 57.631 37.500 0.00 0.00 0.00 2.41
432 433 6.958767 ACAAGCCAAGTAGACCTATTACAAT 58.041 36.000 0.00 0.00 0.00 2.71
433 434 8.086143 ACAAGCCAAGTAGACCTATTACAATA 57.914 34.615 0.00 0.00 0.00 1.90
434 435 7.985752 ACAAGCCAAGTAGACCTATTACAATAC 59.014 37.037 0.00 0.00 0.00 1.89
435 436 6.746120 AGCCAAGTAGACCTATTACAATACG 58.254 40.000 0.00 0.00 0.00 3.06
436 437 6.548622 AGCCAAGTAGACCTATTACAATACGA 59.451 38.462 0.00 0.00 0.00 3.43
437 438 7.232941 AGCCAAGTAGACCTATTACAATACGAT 59.767 37.037 0.00 0.00 0.00 3.73
438 439 7.871463 GCCAAGTAGACCTATTACAATACGATT 59.129 37.037 0.00 0.00 0.00 3.34
444 445 8.937207 AGACCTATTACAATACGATTAGGACT 57.063 34.615 0.00 0.00 0.00 3.85
447 448 9.240734 ACCTATTACAATACGATTAGGACTAGG 57.759 37.037 0.00 0.00 0.00 3.02
448 449 9.240734 CCTATTACAATACGATTAGGACTAGGT 57.759 37.037 0.00 0.00 0.00 3.08
466 467 3.975168 GGTAACTTGAGAGCCAGGTAA 57.025 47.619 0.00 0.00 33.60 2.85
467 468 4.489306 GGTAACTTGAGAGCCAGGTAAT 57.511 45.455 0.00 0.00 33.60 1.89
468 469 5.609533 GGTAACTTGAGAGCCAGGTAATA 57.390 43.478 0.00 0.00 33.60 0.98
469 470 5.602628 GGTAACTTGAGAGCCAGGTAATAG 58.397 45.833 0.00 0.00 33.60 1.73
470 471 5.128991 GGTAACTTGAGAGCCAGGTAATAGT 59.871 44.000 0.00 0.00 33.60 2.12
471 472 5.346181 AACTTGAGAGCCAGGTAATAGTC 57.654 43.478 0.00 0.00 33.60 2.59
472 473 4.615513 ACTTGAGAGCCAGGTAATAGTCT 58.384 43.478 0.00 0.00 32.90 3.24
473 474 5.767670 ACTTGAGAGCCAGGTAATAGTCTA 58.232 41.667 0.00 0.00 32.90 2.59
474 475 5.830991 ACTTGAGAGCCAGGTAATAGTCTAG 59.169 44.000 0.00 0.00 32.90 2.43
475 476 4.145807 TGAGAGCCAGGTAATAGTCTAGC 58.854 47.826 0.00 0.00 0.00 3.42
476 477 4.145807 GAGAGCCAGGTAATAGTCTAGCA 58.854 47.826 0.00 0.00 0.00 3.49
477 478 4.547671 AGAGCCAGGTAATAGTCTAGCAA 58.452 43.478 0.00 0.00 0.00 3.91
478 479 4.962995 AGAGCCAGGTAATAGTCTAGCAAA 59.037 41.667 0.00 0.00 0.00 3.68
479 480 5.425539 AGAGCCAGGTAATAGTCTAGCAAAA 59.574 40.000 0.00 0.00 0.00 2.44
480 481 5.675538 AGCCAGGTAATAGTCTAGCAAAAG 58.324 41.667 0.00 0.00 0.00 2.27
481 482 4.816925 GCCAGGTAATAGTCTAGCAAAAGG 59.183 45.833 0.00 0.00 0.00 3.11
482 483 5.368989 CCAGGTAATAGTCTAGCAAAAGGG 58.631 45.833 0.00 0.00 0.00 3.95
483 484 5.130477 CCAGGTAATAGTCTAGCAAAAGGGA 59.870 44.000 0.00 0.00 0.00 4.20
484 485 6.284459 CAGGTAATAGTCTAGCAAAAGGGAG 58.716 44.000 0.00 0.00 0.00 4.30
485 486 5.965091 AGGTAATAGTCTAGCAAAAGGGAGT 59.035 40.000 0.00 0.00 0.00 3.85
486 487 7.069578 CAGGTAATAGTCTAGCAAAAGGGAGTA 59.930 40.741 0.00 0.00 0.00 2.59
487 488 7.069702 AGGTAATAGTCTAGCAAAAGGGAGTAC 59.930 40.741 0.00 0.00 0.00 2.73
488 489 5.873146 ATAGTCTAGCAAAAGGGAGTACC 57.127 43.478 0.00 0.00 40.67 3.34
489 490 3.517612 AGTCTAGCAAAAGGGAGTACCA 58.482 45.455 0.00 0.00 43.89 3.25
490 491 3.908103 AGTCTAGCAAAAGGGAGTACCAA 59.092 43.478 0.00 0.00 43.89 3.67
501 502 1.557832 GGAGTACCAACCATGCCACTA 59.442 52.381 0.00 0.00 35.97 2.74
538 539 4.927425 TCAGCGATCAACCAAGTTAAGTAC 59.073 41.667 0.00 0.00 0.00 2.73
539 540 4.929808 CAGCGATCAACCAAGTTAAGTACT 59.070 41.667 0.00 0.00 39.32 2.73
541 542 4.031426 GCGATCAACCAAGTTAAGTACTCG 59.969 45.833 0.00 0.00 35.54 4.18
589 593 0.803117 TGTCTAGAGTCTGTTCGCGG 59.197 55.000 6.13 0.00 0.00 6.46
611 615 2.092323 GCGCTTTTTAGTCTTGGGGAT 58.908 47.619 0.00 0.00 0.00 3.85
646 664 3.322254 TCTTGACTCTTGACTCTTGACCC 59.678 47.826 0.00 0.00 0.00 4.46
664 765 1.671054 CGTGAGCCGGTTGGTGAAT 60.671 57.895 1.90 0.00 37.67 2.57
665 766 0.390603 CGTGAGCCGGTTGGTGAATA 60.391 55.000 1.90 0.00 37.67 1.75
668 769 1.066430 TGAGCCGGTTGGTGAATACTC 60.066 52.381 1.90 0.00 37.67 2.59
840 1019 1.131126 CAGTACATGGCCAAGCGAAAG 59.869 52.381 10.96 0.00 0.00 2.62
907 1265 4.295119 GGACACACGCGACCACCT 62.295 66.667 15.93 0.00 0.00 4.00
908 1266 3.036084 GACACACGCGACCACCTG 61.036 66.667 15.93 0.68 0.00 4.00
950 1308 2.103143 CTACTCGTCTGCCTGCCG 59.897 66.667 0.00 0.00 0.00 5.69
963 1324 2.685017 TGCCGCTCCAGACTCCAT 60.685 61.111 0.00 0.00 0.00 3.41
984 1346 7.066142 TCCATTATATAAACACCAACCATGCT 58.934 34.615 0.00 0.00 0.00 3.79
990 1352 0.106769 ACACCAACCATGCTCACACA 60.107 50.000 0.00 0.00 0.00 3.72
994 1356 1.600636 AACCATGCTCACACACCCG 60.601 57.895 0.00 0.00 0.00 5.28
995 1357 2.747460 CCATGCTCACACACCCGG 60.747 66.667 0.00 0.00 0.00 5.73
1042 1404 2.291217 GGTTTCTTCTGAGCCCATCCTT 60.291 50.000 0.00 0.00 0.00 3.36
1064 1430 1.109920 TGCCTAGCTAGCTCCTTCCG 61.110 60.000 23.26 4.46 0.00 4.30
1076 1442 2.435693 CCTTCCGGCTCCCAGTAGG 61.436 68.421 0.00 0.00 0.00 3.18
1077 1443 1.686110 CTTCCGGCTCCCAGTAGGT 60.686 63.158 0.00 0.00 36.75 3.08
1080 1446 2.722201 CCGGCTCCCAGTAGGTGAC 61.722 68.421 0.00 0.00 36.75 3.67
1108 1481 0.904865 ACAGATTCCTCGGCTCCACA 60.905 55.000 0.00 0.00 0.00 4.17
1114 1487 2.425592 CTCGGCTCCACACCACAA 59.574 61.111 0.00 0.00 0.00 3.33
1154 1617 1.081892 CAATGACGAAGCACCAGAGG 58.918 55.000 0.00 0.00 0.00 3.69
1553 2049 4.634184 TGTCTAGACCGATTTCAGTAGC 57.366 45.455 20.11 0.00 0.00 3.58
1577 2084 6.902771 TCTAGACTTCTAGTGCAGAGTTTT 57.097 37.500 12.11 0.00 44.74 2.43
1728 2353 8.275015 TGTTGTTTCAACTGAACTATTCTTGA 57.725 30.769 12.66 0.00 33.13 3.02
1729 2354 8.735315 TGTTGTTTCAACTGAACTATTCTTGAA 58.265 29.630 12.66 3.25 34.22 2.69
1730 2355 9.010366 GTTGTTTCAACTGAACTATTCTTGAAC 57.990 33.333 5.52 0.00 35.14 3.18
1784 2417 4.825422 AGCGCTCATATATACATGCAACT 58.175 39.130 2.64 0.00 0.00 3.16
1786 2419 4.627035 GCGCTCATATATACATGCAACTCA 59.373 41.667 0.00 0.00 0.00 3.41
1814 2447 1.818959 TACACACGCACACCCTACCC 61.819 60.000 0.00 0.00 0.00 3.69
1855 2488 6.040955 AGAGACTGAGTCGGCATATCATTTTA 59.959 38.462 6.99 0.00 37.67 1.52
1889 2522 3.747266 CCGTAGGCTCCTCGTAGG 58.253 66.667 0.00 0.00 46.14 3.18
1920 2553 1.374758 CTCCTCCCACTGAACGCAC 60.375 63.158 0.00 0.00 0.00 5.34
1962 2605 7.539034 AAATAAATGCAAGTACCAGGACTTT 57.461 32.000 0.00 0.00 37.57 2.66
1968 2611 4.141344 TGCAAGTACCAGGACTTTAAACCT 60.141 41.667 0.00 0.00 37.57 3.50
1969 2612 5.072058 TGCAAGTACCAGGACTTTAAACCTA 59.928 40.000 0.00 0.00 37.57 3.08
1972 2616 7.176165 GCAAGTACCAGGACTTTAAACCTAATT 59.824 37.037 0.00 0.00 37.57 1.40
1978 2622 5.016831 AGGACTTTAAACCTAATTGGCTGG 58.983 41.667 0.00 0.00 40.22 4.85
2008 2652 3.518303 ACTGTCCTACTAACCATCCAACC 59.482 47.826 0.00 0.00 0.00 3.77
2016 2660 5.313280 ACTAACCATCCAACCACAAGTTA 57.687 39.130 0.00 0.00 36.18 2.24
2063 2868 7.397221 TCGATCATAAATTCATAATCCAGCCT 58.603 34.615 0.00 0.00 0.00 4.58
2065 2870 6.579666 TCATAAATTCATAATCCAGCCTGC 57.420 37.500 0.00 0.00 0.00 4.85
2075 2880 2.749584 CCAGCCTGCTCTATGCCCA 61.750 63.158 0.00 0.00 42.00 5.36
2082 2891 3.691609 GCCTGCTCTATGCCCATAATTAC 59.308 47.826 0.00 0.00 42.00 1.89
2169 2984 5.763204 TCATGTGGAGGTTAAACTTCAAGAC 59.237 40.000 2.10 0.00 0.00 3.01
2171 2986 5.502079 TGTGGAGGTTAAACTTCAAGACAA 58.498 37.500 2.10 0.00 0.00 3.18
2334 3150 1.796190 CTGCGATCTGGCGGTAGCTA 61.796 60.000 10.51 0.00 44.37 3.32
2339 3155 3.930012 CTGGCGGTAGCTAGGGCC 61.930 72.222 22.38 22.38 46.59 5.80
2346 3162 2.745515 GGTAGCTAGGGCCGATTTAG 57.254 55.000 0.00 0.00 39.73 1.85
2353 3169 3.338676 GGCCGATTTAGCCGCTCG 61.339 66.667 0.00 0.00 41.41 5.03
2426 3242 1.448013 GTCGGCTGGTGGAGTTAGC 60.448 63.158 0.00 0.00 36.74 3.09
2430 3246 2.662596 CTGGTGGAGTTAGCGGCA 59.337 61.111 1.45 0.00 0.00 5.69
2436 3252 2.182842 GGAGTTAGCGGCATGGCAG 61.183 63.158 20.37 12.85 34.64 4.85
2445 3261 1.290009 GGCATGGCAGTGGTGTTTC 59.710 57.895 15.47 0.00 0.00 2.78
2446 3262 1.181098 GGCATGGCAGTGGTGTTTCT 61.181 55.000 15.47 0.00 0.00 2.52
2461 3277 1.135660 GTTTCTGCCCTAGCGCTTTTC 60.136 52.381 18.68 3.21 44.31 2.29
2479 3295 0.320073 TCGTCCGCCAATTCGTCTTT 60.320 50.000 0.00 0.00 0.00 2.52
2481 3297 1.153353 GTCCGCCAATTCGTCTTTCA 58.847 50.000 0.00 0.00 0.00 2.69
2491 3307 5.504665 CCAATTCGTCTTTCAGCCATATGTC 60.505 44.000 1.24 0.00 0.00 3.06
2522 3338 4.373116 TGGCCGCTCACGAGTTCC 62.373 66.667 0.00 0.00 43.93 3.62
2530 3346 0.454620 CTCACGAGTTCCGGTCTTCG 60.455 60.000 17.91 17.91 43.93 3.79
2531 3347 1.168407 TCACGAGTTCCGGTCTTCGT 61.168 55.000 18.94 18.94 43.93 3.85
2534 3350 1.289380 GAGTTCCGGTCTTCGTGCT 59.711 57.895 0.00 0.00 37.11 4.40
2543 3359 2.025155 GGTCTTCGTGCTGGAGATCTA 58.975 52.381 0.00 0.00 0.00 1.98
2547 3363 4.276183 GTCTTCGTGCTGGAGATCTATACA 59.724 45.833 0.00 0.00 0.00 2.29
2551 3367 5.073428 TCGTGCTGGAGATCTATACAGATT 58.927 41.667 19.95 0.00 41.78 2.40
2553 3369 5.048434 CGTGCTGGAGATCTATACAGATTGA 60.048 44.000 19.95 3.67 41.78 2.57
2564 3380 6.623114 ATCTATACAGATTGACGTATGTCGCC 60.623 42.308 10.44 2.41 39.86 5.54
2569 3385 2.106332 GACGTATGTCGCCCCTGG 59.894 66.667 0.00 0.00 44.19 4.45
2575 3391 1.207329 GTATGTCGCCCCTGGATATCC 59.793 57.143 15.39 15.39 0.00 2.59
2591 3407 5.771666 TGGATATCCAGATCAAAAATGCTCC 59.228 40.000 20.98 0.00 42.01 4.70
2593 3409 3.071874 TCCAGATCAAAAATGCTCCGT 57.928 42.857 0.00 0.00 0.00 4.69
2595 3411 3.191162 TCCAGATCAAAAATGCTCCGTTG 59.809 43.478 0.00 0.00 0.00 4.10
2597 3413 2.094545 AGATCAAAAATGCTCCGTTGGC 60.095 45.455 0.00 0.00 0.00 4.52
2611 3427 2.029244 CCGTTGGCGCGATCATATTATC 59.971 50.000 12.10 0.00 36.67 1.75
2613 3429 3.122780 CGTTGGCGCGATCATATTATCAA 59.877 43.478 12.10 0.00 0.00 2.57
2620 3436 5.501413 GCGCGATCATATTATCAACCATCAG 60.501 44.000 12.10 0.00 0.00 2.90
2622 3438 5.295292 GCGATCATATTATCAACCATCAGGG 59.705 44.000 0.00 0.00 44.81 4.45
2665 3481 2.000447 GCTTCGCTTTCTTATCGGTGT 59.000 47.619 0.00 0.00 0.00 4.16
2666 3482 2.029365 GCTTCGCTTTCTTATCGGTGTC 59.971 50.000 0.00 0.00 0.00 3.67
2667 3483 3.250744 CTTCGCTTTCTTATCGGTGTCA 58.749 45.455 0.00 0.00 0.00 3.58
2668 3484 3.520290 TCGCTTTCTTATCGGTGTCAT 57.480 42.857 0.00 0.00 0.00 3.06
2669 3485 3.186909 TCGCTTTCTTATCGGTGTCATG 58.813 45.455 0.00 0.00 0.00 3.07
2670 3486 2.285834 CGCTTTCTTATCGGTGTCATGC 60.286 50.000 0.00 0.00 0.00 4.06
2671 3487 2.285834 GCTTTCTTATCGGTGTCATGCG 60.286 50.000 0.00 0.00 0.00 4.73
2672 3488 2.951457 TTCTTATCGGTGTCATGCGA 57.049 45.000 0.00 0.00 0.00 5.10
2673 3489 2.203800 TCTTATCGGTGTCATGCGAC 57.796 50.000 0.00 0.00 42.93 5.19
2685 3501 3.511699 GTCATGCGACATGTCTAAGTCA 58.488 45.455 22.95 12.66 42.13 3.41
2686 3502 3.926527 GTCATGCGACATGTCTAAGTCAA 59.073 43.478 22.95 1.95 42.13 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.551560 CCATCCCATGATCCCCAATGG 60.552 57.143 0.00 3.32 0.00 3.16
1 2 1.933021 CCATCCCATGATCCCCAATG 58.067 55.000 0.00 0.00 0.00 2.82
2 3 0.115745 GCCATCCCATGATCCCCAAT 59.884 55.000 0.00 0.00 0.00 3.16
3 4 1.295170 TGCCATCCCATGATCCCCAA 61.295 55.000 0.00 0.00 0.00 4.12
4 5 1.700659 TGCCATCCCATGATCCCCA 60.701 57.895 0.00 0.00 0.00 4.96
5 6 1.076192 CTGCCATCCCATGATCCCC 59.924 63.158 0.00 0.00 0.00 4.81
6 7 1.605738 GCTGCCATCCCATGATCCC 60.606 63.158 0.00 0.00 0.00 3.85
7 8 1.152138 TGCTGCCATCCCATGATCC 59.848 57.895 0.00 0.00 0.00 3.36
8 9 1.512996 CGTGCTGCCATCCCATGATC 61.513 60.000 0.00 0.00 0.00 2.92
9 10 1.527611 CGTGCTGCCATCCCATGAT 60.528 57.895 0.00 0.00 0.00 2.45
10 11 2.124612 CGTGCTGCCATCCCATGA 60.125 61.111 0.00 0.00 0.00 3.07
11 12 3.214123 CCGTGCTGCCATCCCATG 61.214 66.667 0.00 0.00 0.00 3.66
30 31 4.612412 TCCCACGTCAACGCCACC 62.612 66.667 1.81 0.00 44.43 4.61
31 32 3.041940 CTCCCACGTCAACGCCAC 61.042 66.667 1.81 0.00 44.43 5.01
32 33 4.980805 GCTCCCACGTCAACGCCA 62.981 66.667 1.81 0.00 44.43 5.69
35 36 2.355363 TTCGCTCCCACGTCAACG 60.355 61.111 0.12 0.12 46.33 4.10
36 37 0.389948 ATCTTCGCTCCCACGTCAAC 60.390 55.000 0.00 0.00 0.00 3.18
37 38 0.320374 AATCTTCGCTCCCACGTCAA 59.680 50.000 0.00 0.00 0.00 3.18
38 39 0.389817 CAATCTTCGCTCCCACGTCA 60.390 55.000 0.00 0.00 0.00 4.35
39 40 1.696832 GCAATCTTCGCTCCCACGTC 61.697 60.000 0.00 0.00 0.00 4.34
40 41 1.741770 GCAATCTTCGCTCCCACGT 60.742 57.895 0.00 0.00 0.00 4.49
41 42 1.699656 CTGCAATCTTCGCTCCCACG 61.700 60.000 0.00 0.00 0.00 4.94
42 43 1.986575 GCTGCAATCTTCGCTCCCAC 61.987 60.000 0.00 0.00 0.00 4.61
43 44 1.746615 GCTGCAATCTTCGCTCCCA 60.747 57.895 0.00 0.00 0.00 4.37
44 45 2.817423 CGCTGCAATCTTCGCTCCC 61.817 63.158 0.00 0.00 0.00 4.30
45 46 2.705826 CGCTGCAATCTTCGCTCC 59.294 61.111 0.00 0.00 0.00 4.70
46 47 2.022484 GCGCTGCAATCTTCGCTC 59.978 61.111 0.00 0.00 43.70 5.03
47 48 3.503363 GGCGCTGCAATCTTCGCT 61.503 61.111 7.64 0.00 45.97 4.93
48 49 4.543084 GGGCGCTGCAATCTTCGC 62.543 66.667 7.64 7.96 45.99 4.70
49 50 4.228097 CGGGCGCTGCAATCTTCG 62.228 66.667 7.64 0.00 0.00 3.79
50 51 2.817423 CTCGGGCGCTGCAATCTTC 61.817 63.158 7.64 0.00 0.00 2.87
51 52 2.821366 CTCGGGCGCTGCAATCTT 60.821 61.111 7.64 0.00 0.00 2.40
52 53 4.845580 CCTCGGGCGCTGCAATCT 62.846 66.667 7.64 0.00 0.00 2.40
58 59 3.883744 AAGTTCACCTCGGGCGCTG 62.884 63.158 7.64 0.00 0.00 5.18
59 60 3.591254 GAAGTTCACCTCGGGCGCT 62.591 63.158 7.64 0.00 0.00 5.92
60 61 3.119096 GAAGTTCACCTCGGGCGC 61.119 66.667 0.00 0.00 0.00 6.53
61 62 2.758770 TTCGAAGTTCACCTCGGGCG 62.759 60.000 3.32 0.00 0.00 6.13
62 63 1.005394 TTCGAAGTTCACCTCGGGC 60.005 57.895 3.32 0.00 0.00 6.13
63 64 0.601558 TCTTCGAAGTTCACCTCGGG 59.398 55.000 23.85 0.00 0.00 5.14
64 65 1.402984 CCTCTTCGAAGTTCACCTCGG 60.403 57.143 23.85 9.31 0.00 4.63
65 66 1.269998 ACCTCTTCGAAGTTCACCTCG 59.730 52.381 23.85 6.95 0.00 4.63
66 67 2.610727 CCACCTCTTCGAAGTTCACCTC 60.611 54.545 23.85 0.00 0.00 3.85
67 68 1.344763 CCACCTCTTCGAAGTTCACCT 59.655 52.381 23.85 0.57 0.00 4.00
68 69 1.797025 CCACCTCTTCGAAGTTCACC 58.203 55.000 23.85 0.00 0.00 4.02
69 70 1.149148 GCCACCTCTTCGAAGTTCAC 58.851 55.000 23.85 7.36 0.00 3.18
70 71 0.319555 CGCCACCTCTTCGAAGTTCA 60.320 55.000 23.85 4.98 0.00 3.18
71 72 1.627550 GCGCCACCTCTTCGAAGTTC 61.628 60.000 23.85 7.75 0.00 3.01
72 73 1.668151 GCGCCACCTCTTCGAAGTT 60.668 57.895 23.85 7.85 0.00 2.66
73 74 2.048127 GCGCCACCTCTTCGAAGT 60.048 61.111 23.85 3.77 0.00 3.01
74 75 2.815647 GGCGCCACCTCTTCGAAG 60.816 66.667 24.80 19.35 34.51 3.79
75 76 2.463589 ATTGGCGCCACCTCTTCGAA 62.464 55.000 32.95 12.15 40.22 3.71
76 77 2.954684 ATTGGCGCCACCTCTTCGA 61.955 57.895 32.95 13.05 40.22 3.71
77 78 2.436646 ATTGGCGCCACCTCTTCG 60.437 61.111 32.95 0.00 40.22 3.79
78 79 2.409870 CCATTGGCGCCACCTCTTC 61.410 63.158 32.95 0.00 40.22 2.87
79 80 1.847798 TACCATTGGCGCCACCTCTT 61.848 55.000 32.95 15.29 40.22 2.85
80 81 2.257409 CTACCATTGGCGCCACCTCT 62.257 60.000 32.95 14.94 40.22 3.69
81 82 1.819632 CTACCATTGGCGCCACCTC 60.820 63.158 32.95 0.00 40.22 3.85
82 83 1.268992 TACTACCATTGGCGCCACCT 61.269 55.000 32.95 17.71 40.22 4.00
83 84 0.814010 CTACTACCATTGGCGCCACC 60.814 60.000 32.95 0.55 39.84 4.61
84 85 0.107848 ACTACTACCATTGGCGCCAC 60.108 55.000 32.95 1.51 0.00 5.01
85 86 0.616371 AACTACTACCATTGGCGCCA 59.384 50.000 29.03 29.03 0.00 5.69
86 87 1.014352 CAACTACTACCATTGGCGCC 58.986 55.000 22.73 22.73 0.00 6.53
87 88 1.396996 CACAACTACTACCATTGGCGC 59.603 52.381 0.00 0.00 0.00 6.53
88 89 2.006888 CCACAACTACTACCATTGGCG 58.993 52.381 1.54 0.00 0.00 5.69
89 90 2.026636 TCCCACAACTACTACCATTGGC 60.027 50.000 1.54 0.00 0.00 4.52
90 91 3.263425 ACTCCCACAACTACTACCATTGG 59.737 47.826 0.00 0.00 0.00 3.16
91 92 4.553330 ACTCCCACAACTACTACCATTG 57.447 45.455 0.00 0.00 0.00 2.82
92 93 4.595781 TCAACTCCCACAACTACTACCATT 59.404 41.667 0.00 0.00 0.00 3.16
93 94 4.164981 TCAACTCCCACAACTACTACCAT 58.835 43.478 0.00 0.00 0.00 3.55
94 95 3.576982 CTCAACTCCCACAACTACTACCA 59.423 47.826 0.00 0.00 0.00 3.25
95 96 3.830755 TCTCAACTCCCACAACTACTACC 59.169 47.826 0.00 0.00 0.00 3.18
96 97 5.652518 GATCTCAACTCCCACAACTACTAC 58.347 45.833 0.00 0.00 0.00 2.73
97 98 4.398358 CGATCTCAACTCCCACAACTACTA 59.602 45.833 0.00 0.00 0.00 1.82
98 99 3.193691 CGATCTCAACTCCCACAACTACT 59.806 47.826 0.00 0.00 0.00 2.57
99 100 3.192844 TCGATCTCAACTCCCACAACTAC 59.807 47.826 0.00 0.00 0.00 2.73
100 101 3.427573 TCGATCTCAACTCCCACAACTA 58.572 45.455 0.00 0.00 0.00 2.24
101 102 2.232452 CTCGATCTCAACTCCCACAACT 59.768 50.000 0.00 0.00 0.00 3.16
102 103 2.611518 CTCGATCTCAACTCCCACAAC 58.388 52.381 0.00 0.00 0.00 3.32
103 104 1.550524 CCTCGATCTCAACTCCCACAA 59.449 52.381 0.00 0.00 0.00 3.33
104 105 1.186200 CCTCGATCTCAACTCCCACA 58.814 55.000 0.00 0.00 0.00 4.17
105 106 0.461961 CCCTCGATCTCAACTCCCAC 59.538 60.000 0.00 0.00 0.00 4.61
106 107 0.041238 ACCCTCGATCTCAACTCCCA 59.959 55.000 0.00 0.00 0.00 4.37
107 108 0.461961 CACCCTCGATCTCAACTCCC 59.538 60.000 0.00 0.00 0.00 4.30
108 109 1.475403 TCACCCTCGATCTCAACTCC 58.525 55.000 0.00 0.00 0.00 3.85
109 110 2.223923 CCATCACCCTCGATCTCAACTC 60.224 54.545 0.00 0.00 0.00 3.01
110 111 1.759445 CCATCACCCTCGATCTCAACT 59.241 52.381 0.00 0.00 0.00 3.16
111 112 1.202580 CCCATCACCCTCGATCTCAAC 60.203 57.143 0.00 0.00 0.00 3.18
112 113 1.123077 CCCATCACCCTCGATCTCAA 58.877 55.000 0.00 0.00 0.00 3.02
113 114 0.032117 ACCCATCACCCTCGATCTCA 60.032 55.000 0.00 0.00 0.00 3.27
114 115 1.996798 TACCCATCACCCTCGATCTC 58.003 55.000 0.00 0.00 0.00 2.75
115 116 2.704190 ATACCCATCACCCTCGATCT 57.296 50.000 0.00 0.00 0.00 2.75
116 117 4.585162 CCTATATACCCATCACCCTCGATC 59.415 50.000 0.00 0.00 0.00 3.69
117 118 4.547671 CCTATATACCCATCACCCTCGAT 58.452 47.826 0.00 0.00 0.00 3.59
118 119 3.309629 CCCTATATACCCATCACCCTCGA 60.310 52.174 0.00 0.00 0.00 4.04
119 120 3.031736 CCCTATATACCCATCACCCTCG 58.968 54.545 0.00 0.00 0.00 4.63
120 121 4.031611 GTCCCTATATACCCATCACCCTC 58.968 52.174 0.00 0.00 0.00 4.30
121 122 3.673152 AGTCCCTATATACCCATCACCCT 59.327 47.826 0.00 0.00 0.00 4.34
122 123 4.076175 AGTCCCTATATACCCATCACCC 57.924 50.000 0.00 0.00 0.00 4.61
123 124 9.091220 GATATTAGTCCCTATATACCCATCACC 57.909 40.741 0.00 0.00 0.00 4.02
124 125 8.794553 CGATATTAGTCCCTATATACCCATCAC 58.205 40.741 0.00 0.00 0.00 3.06
125 126 7.948447 CCGATATTAGTCCCTATATACCCATCA 59.052 40.741 0.00 0.00 0.00 3.07
126 127 8.168725 TCCGATATTAGTCCCTATATACCCATC 58.831 40.741 0.00 0.00 0.00 3.51
127 128 8.065385 TCCGATATTAGTCCCTATATACCCAT 57.935 38.462 0.00 0.00 0.00 4.00
128 129 7.351720 TCTCCGATATTAGTCCCTATATACCCA 59.648 40.741 0.00 0.00 0.00 4.51
129 130 7.753630 TCTCCGATATTAGTCCCTATATACCC 58.246 42.308 0.00 0.00 0.00 3.69
130 131 9.810870 AATCTCCGATATTAGTCCCTATATACC 57.189 37.037 0.00 0.00 0.00 2.73
135 136 9.357161 GATACAATCTCCGATATTAGTCCCTAT 57.643 37.037 0.00 0.00 0.00 2.57
136 137 7.498239 CGATACAATCTCCGATATTAGTCCCTA 59.502 40.741 0.00 0.00 0.00 3.53
137 138 6.319152 CGATACAATCTCCGATATTAGTCCCT 59.681 42.308 0.00 0.00 0.00 4.20
138 139 6.459848 CCGATACAATCTCCGATATTAGTCCC 60.460 46.154 0.00 0.00 0.00 4.46
139 140 6.496571 CCGATACAATCTCCGATATTAGTCC 58.503 44.000 0.00 0.00 0.00 3.85
140 141 5.972382 GCCGATACAATCTCCGATATTAGTC 59.028 44.000 0.00 0.00 0.00 2.59
141 142 5.448768 CGCCGATACAATCTCCGATATTAGT 60.449 44.000 0.00 0.00 0.00 2.24
142 143 4.970611 CGCCGATACAATCTCCGATATTAG 59.029 45.833 0.00 0.00 0.00 1.73
143 144 4.637091 TCGCCGATACAATCTCCGATATTA 59.363 41.667 0.00 0.00 0.00 0.98
144 145 3.442625 TCGCCGATACAATCTCCGATATT 59.557 43.478 0.00 0.00 0.00 1.28
145 146 3.014623 TCGCCGATACAATCTCCGATAT 58.985 45.455 0.00 0.00 0.00 1.63
146 147 2.429478 TCGCCGATACAATCTCCGATA 58.571 47.619 0.00 0.00 0.00 2.92
147 148 1.244816 TCGCCGATACAATCTCCGAT 58.755 50.000 0.00 0.00 0.00 4.18
148 149 1.001706 CTTCGCCGATACAATCTCCGA 60.002 52.381 0.00 0.00 0.00 4.55
149 150 1.409412 CTTCGCCGATACAATCTCCG 58.591 55.000 0.00 0.00 0.00 4.63
150 151 1.340248 TCCTTCGCCGATACAATCTCC 59.660 52.381 0.00 0.00 0.00 3.71
151 152 2.293677 TCTCCTTCGCCGATACAATCTC 59.706 50.000 0.00 0.00 0.00 2.75
152 153 2.307768 TCTCCTTCGCCGATACAATCT 58.692 47.619 0.00 0.00 0.00 2.40
153 154 2.795175 TCTCCTTCGCCGATACAATC 57.205 50.000 0.00 0.00 0.00 2.67
154 155 2.628178 TGATCTCCTTCGCCGATACAAT 59.372 45.455 0.00 0.00 0.00 2.71
155 156 2.028876 TGATCTCCTTCGCCGATACAA 58.971 47.619 0.00 0.00 0.00 2.41
156 157 1.337071 GTGATCTCCTTCGCCGATACA 59.663 52.381 0.00 0.00 0.00 2.29
157 158 1.663445 CGTGATCTCCTTCGCCGATAC 60.663 57.143 0.00 0.00 0.00 2.24
158 159 0.591659 CGTGATCTCCTTCGCCGATA 59.408 55.000 0.00 0.00 0.00 2.92
159 160 1.360551 CGTGATCTCCTTCGCCGAT 59.639 57.895 0.00 0.00 0.00 4.18
160 161 2.771639 CCGTGATCTCCTTCGCCGA 61.772 63.158 0.00 0.00 0.00 5.54
161 162 2.278857 CCGTGATCTCCTTCGCCG 60.279 66.667 0.00 0.00 0.00 6.46
162 163 2.107141 CCCGTGATCTCCTTCGCC 59.893 66.667 0.00 0.00 0.00 5.54
163 164 2.107141 CCCCGTGATCTCCTTCGC 59.893 66.667 0.00 0.00 0.00 4.70
164 165 2.815308 CCCCCGTGATCTCCTTCG 59.185 66.667 0.00 0.00 0.00 3.79
178 179 3.021263 ACCACCACCTATGCCCCC 61.021 66.667 0.00 0.00 0.00 5.40
179 180 2.275418 CACCACCACCTATGCCCC 59.725 66.667 0.00 0.00 0.00 5.80
180 181 1.276140 TACCACCACCACCTATGCCC 61.276 60.000 0.00 0.00 0.00 5.36
181 182 0.180406 CTACCACCACCACCTATGCC 59.820 60.000 0.00 0.00 0.00 4.40
182 183 1.139058 CTCTACCACCACCACCTATGC 59.861 57.143 0.00 0.00 0.00 3.14
183 184 1.139058 GCTCTACCACCACCACCTATG 59.861 57.143 0.00 0.00 0.00 2.23
184 185 1.008449 AGCTCTACCACCACCACCTAT 59.992 52.381 0.00 0.00 0.00 2.57
185 186 0.412244 AGCTCTACCACCACCACCTA 59.588 55.000 0.00 0.00 0.00 3.08
186 187 0.412244 TAGCTCTACCACCACCACCT 59.588 55.000 0.00 0.00 0.00 4.00
187 188 0.824759 CTAGCTCTACCACCACCACC 59.175 60.000 0.00 0.00 0.00 4.61
188 189 0.824759 CCTAGCTCTACCACCACCAC 59.175 60.000 0.00 0.00 0.00 4.16
189 190 0.325296 CCCTAGCTCTACCACCACCA 60.325 60.000 0.00 0.00 0.00 4.17
190 191 0.325390 ACCCTAGCTCTACCACCACC 60.325 60.000 0.00 0.00 0.00 4.61
191 192 2.091994 TCTACCCTAGCTCTACCACCAC 60.092 54.545 0.00 0.00 0.00 4.16
192 193 2.175069 CTCTACCCTAGCTCTACCACCA 59.825 54.545 0.00 0.00 0.00 4.17
193 194 2.489437 CCTCTACCCTAGCTCTACCACC 60.489 59.091 0.00 0.00 0.00 4.61
194 195 2.442502 TCCTCTACCCTAGCTCTACCAC 59.557 54.545 0.00 0.00 0.00 4.16
195 196 2.712087 CTCCTCTACCCTAGCTCTACCA 59.288 54.545 0.00 0.00 0.00 3.25
196 197 2.040679 CCTCCTCTACCCTAGCTCTACC 59.959 59.091 0.00 0.00 0.00 3.18
197 198 2.981081 TCCTCCTCTACCCTAGCTCTAC 59.019 54.545 0.00 0.00 0.00 2.59
198 199 3.253220 CTCCTCCTCTACCCTAGCTCTA 58.747 54.545 0.00 0.00 0.00 2.43
199 200 2.062636 CTCCTCCTCTACCCTAGCTCT 58.937 57.143 0.00 0.00 0.00 4.09
200 201 1.074889 CCTCCTCCTCTACCCTAGCTC 59.925 61.905 0.00 0.00 0.00 4.09
201 202 1.154430 CCTCCTCCTCTACCCTAGCT 58.846 60.000 0.00 0.00 0.00 3.32
202 203 1.150872 TCCTCCTCCTCTACCCTAGC 58.849 60.000 0.00 0.00 0.00 3.42
203 204 2.490168 GCTTCCTCCTCCTCTACCCTAG 60.490 59.091 0.00 0.00 0.00 3.02
204 205 1.499870 GCTTCCTCCTCCTCTACCCTA 59.500 57.143 0.00 0.00 0.00 3.53
205 206 0.263468 GCTTCCTCCTCCTCTACCCT 59.737 60.000 0.00 0.00 0.00 4.34
206 207 0.761323 GGCTTCCTCCTCCTCTACCC 60.761 65.000 0.00 0.00 0.00 3.69
207 208 1.110518 CGGCTTCCTCCTCCTCTACC 61.111 65.000 0.00 0.00 0.00 3.18
208 209 0.396001 ACGGCTTCCTCCTCCTCTAC 60.396 60.000 0.00 0.00 0.00 2.59
209 210 0.395862 CACGGCTTCCTCCTCCTCTA 60.396 60.000 0.00 0.00 0.00 2.43
210 211 1.684049 CACGGCTTCCTCCTCCTCT 60.684 63.158 0.00 0.00 0.00 3.69
211 212 2.726351 CCACGGCTTCCTCCTCCTC 61.726 68.421 0.00 0.00 0.00 3.71
212 213 2.685380 CCACGGCTTCCTCCTCCT 60.685 66.667 0.00 0.00 0.00 3.69
213 214 4.475135 GCCACGGCTTCCTCCTCC 62.475 72.222 0.00 0.00 38.26 4.30
214 215 4.821589 CGCCACGGCTTCCTCCTC 62.822 72.222 6.48 0.00 39.32 3.71
302 303 0.602060 GTACTAGGGTATGGCTCCGC 59.398 60.000 0.00 0.00 0.00 5.54
303 304 1.254954 GGTACTAGGGTATGGCTCCG 58.745 60.000 0.00 0.00 0.00 4.63
304 305 2.249139 CTGGTACTAGGGTATGGCTCC 58.751 57.143 0.00 0.00 0.00 4.70
305 306 2.158355 TCCTGGTACTAGGGTATGGCTC 60.158 54.545 23.74 0.00 38.42 4.70
306 307 1.864251 TCCTGGTACTAGGGTATGGCT 59.136 52.381 23.74 0.00 38.42 4.75
307 308 2.367894 GTTCCTGGTACTAGGGTATGGC 59.632 54.545 23.74 5.84 38.42 4.40
308 309 3.896272 GAGTTCCTGGTACTAGGGTATGG 59.104 52.174 23.74 0.00 38.42 2.74
309 310 4.805744 AGAGTTCCTGGTACTAGGGTATG 58.194 47.826 23.74 0.00 38.42 2.39
310 311 6.392245 TCTTAGAGTTCCTGGTACTAGGGTAT 59.608 42.308 23.74 10.54 38.42 2.73
311 312 5.733154 TCTTAGAGTTCCTGGTACTAGGGTA 59.267 44.000 23.74 10.64 38.42 3.69
312 313 4.543337 TCTTAGAGTTCCTGGTACTAGGGT 59.457 45.833 23.74 10.02 38.42 4.34
313 314 5.126699 TCTTAGAGTTCCTGGTACTAGGG 57.873 47.826 23.74 8.89 38.42 3.53
314 315 6.716173 GGTATCTTAGAGTTCCTGGTACTAGG 59.284 46.154 18.89 18.89 39.29 3.02
315 316 7.288560 TGGTATCTTAGAGTTCCTGGTACTAG 58.711 42.308 5.92 0.00 0.00 2.57
316 317 7.217028 TGGTATCTTAGAGTTCCTGGTACTA 57.783 40.000 5.92 0.00 0.00 1.82
317 318 6.088541 TGGTATCTTAGAGTTCCTGGTACT 57.911 41.667 5.59 5.59 0.00 2.73
318 319 6.324254 ACATGGTATCTTAGAGTTCCTGGTAC 59.676 42.308 0.00 0.00 0.00 3.34
319 320 6.441222 ACATGGTATCTTAGAGTTCCTGGTA 58.559 40.000 0.00 0.00 0.00 3.25
320 321 5.281314 ACATGGTATCTTAGAGTTCCTGGT 58.719 41.667 0.00 0.00 0.00 4.00
321 322 5.878406 ACATGGTATCTTAGAGTTCCTGG 57.122 43.478 0.00 0.00 0.00 4.45
322 323 6.926272 GCTTACATGGTATCTTAGAGTTCCTG 59.074 42.308 0.00 0.00 0.00 3.86
323 324 6.841755 AGCTTACATGGTATCTTAGAGTTCCT 59.158 38.462 0.00 0.00 0.00 3.36
324 325 7.056844 AGCTTACATGGTATCTTAGAGTTCC 57.943 40.000 0.00 0.00 0.00 3.62
325 326 8.821894 CAAAGCTTACATGGTATCTTAGAGTTC 58.178 37.037 0.00 0.00 0.00 3.01
326 327 8.540388 TCAAAGCTTACATGGTATCTTAGAGTT 58.460 33.333 0.00 0.00 0.00 3.01
327 328 8.079211 TCAAAGCTTACATGGTATCTTAGAGT 57.921 34.615 0.00 0.00 0.00 3.24
328 329 8.948631 TTCAAAGCTTACATGGTATCTTAGAG 57.051 34.615 0.00 0.00 0.00 2.43
355 356 9.161629 GGCCAGCAAATTAATAACAATAGTTTT 57.838 29.630 0.00 0.00 39.15 2.43
356 357 7.491048 CGGCCAGCAAATTAATAACAATAGTTT 59.509 33.333 2.24 0.00 39.15 2.66
357 358 6.978080 CGGCCAGCAAATTAATAACAATAGTT 59.022 34.615 2.24 0.00 41.74 2.24
358 359 6.503524 CGGCCAGCAAATTAATAACAATAGT 58.496 36.000 2.24 0.00 0.00 2.12
359 360 6.991485 CGGCCAGCAAATTAATAACAATAG 57.009 37.500 2.24 0.00 0.00 1.73
388 389 8.996271 GGCTTGTAAACTTTTATATATACCGCT 58.004 33.333 0.00 0.00 0.00 5.52
389 390 8.776470 TGGCTTGTAAACTTTTATATATACCGC 58.224 33.333 0.00 0.00 0.00 5.68
397 398 9.223099 GGTCTACTTGGCTTGTAAACTTTTATA 57.777 33.333 0.00 0.00 0.00 0.98
398 399 7.942894 AGGTCTACTTGGCTTGTAAACTTTTAT 59.057 33.333 0.00 0.00 0.00 1.40
399 400 7.284820 AGGTCTACTTGGCTTGTAAACTTTTA 58.715 34.615 0.00 0.00 0.00 1.52
400 401 6.127101 AGGTCTACTTGGCTTGTAAACTTTT 58.873 36.000 0.00 0.00 0.00 2.27
401 402 5.691896 AGGTCTACTTGGCTTGTAAACTTT 58.308 37.500 0.00 0.00 0.00 2.66
402 403 5.306114 AGGTCTACTTGGCTTGTAAACTT 57.694 39.130 0.00 0.00 0.00 2.66
403 404 4.976540 AGGTCTACTTGGCTTGTAAACT 57.023 40.909 0.00 0.00 0.00 2.66
404 405 7.820872 TGTAATAGGTCTACTTGGCTTGTAAAC 59.179 37.037 0.00 0.00 0.00 2.01
405 406 7.909518 TGTAATAGGTCTACTTGGCTTGTAAA 58.090 34.615 0.00 0.00 0.00 2.01
406 407 7.484993 TGTAATAGGTCTACTTGGCTTGTAA 57.515 36.000 0.00 0.00 0.00 2.41
407 408 7.484993 TTGTAATAGGTCTACTTGGCTTGTA 57.515 36.000 0.00 0.00 0.00 2.41
408 409 6.368779 TTGTAATAGGTCTACTTGGCTTGT 57.631 37.500 0.00 0.00 0.00 3.16
409 410 7.169308 CGTATTGTAATAGGTCTACTTGGCTTG 59.831 40.741 0.00 0.00 0.00 4.01
410 411 7.069085 TCGTATTGTAATAGGTCTACTTGGCTT 59.931 37.037 4.76 0.00 0.00 4.35
411 412 6.548622 TCGTATTGTAATAGGTCTACTTGGCT 59.451 38.462 4.76 0.00 0.00 4.75
412 413 6.742109 TCGTATTGTAATAGGTCTACTTGGC 58.258 40.000 4.76 0.00 0.00 4.52
419 420 8.937207 AGTCCTAATCGTATTGTAATAGGTCT 57.063 34.615 0.00 0.00 33.30 3.85
421 422 9.240734 CCTAGTCCTAATCGTATTGTAATAGGT 57.759 37.037 0.00 0.00 33.30 3.08
422 423 9.240734 ACCTAGTCCTAATCGTATTGTAATAGG 57.759 37.037 0.00 0.00 32.90 2.57
426 427 9.632638 AGTTACCTAGTCCTAATCGTATTGTAA 57.367 33.333 0.00 0.00 0.00 2.41
427 428 9.632638 AAGTTACCTAGTCCTAATCGTATTGTA 57.367 33.333 0.00 0.00 0.00 2.41
428 429 8.411683 CAAGTTACCTAGTCCTAATCGTATTGT 58.588 37.037 0.00 0.00 0.00 2.71
429 430 8.627403 TCAAGTTACCTAGTCCTAATCGTATTG 58.373 37.037 0.00 0.00 0.00 1.90
430 431 8.757982 TCAAGTTACCTAGTCCTAATCGTATT 57.242 34.615 0.00 0.00 0.00 1.89
431 432 8.216423 TCTCAAGTTACCTAGTCCTAATCGTAT 58.784 37.037 0.00 0.00 0.00 3.06
432 433 7.568349 TCTCAAGTTACCTAGTCCTAATCGTA 58.432 38.462 0.00 0.00 0.00 3.43
433 434 6.421485 TCTCAAGTTACCTAGTCCTAATCGT 58.579 40.000 0.00 0.00 0.00 3.73
434 435 6.513720 GCTCTCAAGTTACCTAGTCCTAATCG 60.514 46.154 0.00 0.00 0.00 3.34
435 436 6.239092 GGCTCTCAAGTTACCTAGTCCTAATC 60.239 46.154 0.00 0.00 0.00 1.75
436 437 5.599242 GGCTCTCAAGTTACCTAGTCCTAAT 59.401 44.000 0.00 0.00 0.00 1.73
437 438 4.954826 GGCTCTCAAGTTACCTAGTCCTAA 59.045 45.833 0.00 0.00 0.00 2.69
438 439 4.017775 TGGCTCTCAAGTTACCTAGTCCTA 60.018 45.833 0.00 0.00 0.00 2.94
439 440 3.245658 TGGCTCTCAAGTTACCTAGTCCT 60.246 47.826 0.00 0.00 0.00 3.85
440 441 3.097614 TGGCTCTCAAGTTACCTAGTCC 58.902 50.000 0.00 0.00 0.00 3.85
441 442 3.131400 CCTGGCTCTCAAGTTACCTAGTC 59.869 52.174 0.00 0.00 0.00 2.59
442 443 3.100671 CCTGGCTCTCAAGTTACCTAGT 58.899 50.000 0.00 0.00 0.00 2.57
443 444 3.100671 ACCTGGCTCTCAAGTTACCTAG 58.899 50.000 0.00 0.00 0.00 3.02
444 445 3.185880 ACCTGGCTCTCAAGTTACCTA 57.814 47.619 0.00 0.00 0.00 3.08
445 446 2.031495 ACCTGGCTCTCAAGTTACCT 57.969 50.000 0.00 0.00 0.00 3.08
446 447 3.975168 TTACCTGGCTCTCAAGTTACC 57.025 47.619 0.00 0.00 0.00 2.85
447 448 6.097129 AGACTATTACCTGGCTCTCAAGTTAC 59.903 42.308 0.00 0.00 0.00 2.50
448 449 6.195700 AGACTATTACCTGGCTCTCAAGTTA 58.804 40.000 0.00 0.00 0.00 2.24
449 450 5.026790 AGACTATTACCTGGCTCTCAAGTT 58.973 41.667 0.00 0.00 0.00 2.66
450 451 4.615513 AGACTATTACCTGGCTCTCAAGT 58.384 43.478 0.00 0.00 0.00 3.16
451 452 5.278758 GCTAGACTATTACCTGGCTCTCAAG 60.279 48.000 0.00 0.00 34.60 3.02
452 453 4.585162 GCTAGACTATTACCTGGCTCTCAA 59.415 45.833 0.00 0.00 34.60 3.02
453 454 4.145807 GCTAGACTATTACCTGGCTCTCA 58.854 47.826 0.00 0.00 34.60 3.27
454 455 4.145807 TGCTAGACTATTACCTGGCTCTC 58.854 47.826 0.00 0.00 37.70 3.20
455 456 4.186077 TGCTAGACTATTACCTGGCTCT 57.814 45.455 0.00 0.00 37.70 4.09
456 457 4.939052 TTGCTAGACTATTACCTGGCTC 57.061 45.455 0.00 0.00 37.70 4.70
457 458 5.396884 CCTTTTGCTAGACTATTACCTGGCT 60.397 44.000 0.00 0.00 37.70 4.75
458 459 4.816925 CCTTTTGCTAGACTATTACCTGGC 59.183 45.833 0.00 0.00 37.40 4.85
459 460 5.130477 TCCCTTTTGCTAGACTATTACCTGG 59.870 44.000 0.00 0.00 0.00 4.45
460 461 6.127026 ACTCCCTTTTGCTAGACTATTACCTG 60.127 42.308 0.00 0.00 0.00 4.00
461 462 5.965091 ACTCCCTTTTGCTAGACTATTACCT 59.035 40.000 0.00 0.00 0.00 3.08
462 463 6.236558 ACTCCCTTTTGCTAGACTATTACC 57.763 41.667 0.00 0.00 0.00 2.85
463 464 7.147776 TGGTACTCCCTTTTGCTAGACTATTAC 60.148 40.741 0.00 0.00 0.00 1.89
464 465 6.899075 TGGTACTCCCTTTTGCTAGACTATTA 59.101 38.462 0.00 0.00 0.00 0.98
465 466 5.724854 TGGTACTCCCTTTTGCTAGACTATT 59.275 40.000 0.00 0.00 0.00 1.73
466 467 5.278061 TGGTACTCCCTTTTGCTAGACTAT 58.722 41.667 0.00 0.00 0.00 2.12
467 468 4.680407 TGGTACTCCCTTTTGCTAGACTA 58.320 43.478 0.00 0.00 0.00 2.59
468 469 3.517612 TGGTACTCCCTTTTGCTAGACT 58.482 45.455 0.00 0.00 0.00 3.24
469 470 3.975168 TGGTACTCCCTTTTGCTAGAC 57.025 47.619 0.00 0.00 0.00 2.59
470 471 3.008704 GGTTGGTACTCCCTTTTGCTAGA 59.991 47.826 0.00 0.00 0.00 2.43
471 472 3.244770 TGGTTGGTACTCCCTTTTGCTAG 60.245 47.826 0.00 0.00 0.00 3.42
472 473 2.712087 TGGTTGGTACTCCCTTTTGCTA 59.288 45.455 0.00 0.00 0.00 3.49
473 474 1.497286 TGGTTGGTACTCCCTTTTGCT 59.503 47.619 0.00 0.00 0.00 3.91
474 475 1.989706 TGGTTGGTACTCCCTTTTGC 58.010 50.000 0.00 0.00 0.00 3.68
475 476 2.231235 GCATGGTTGGTACTCCCTTTTG 59.769 50.000 0.00 0.00 0.00 2.44
476 477 2.525368 GCATGGTTGGTACTCCCTTTT 58.475 47.619 0.00 0.00 0.00 2.27
477 478 1.272480 GGCATGGTTGGTACTCCCTTT 60.272 52.381 0.00 0.00 0.00 3.11
478 479 0.331616 GGCATGGTTGGTACTCCCTT 59.668 55.000 0.00 0.00 0.00 3.95
479 480 0.844661 TGGCATGGTTGGTACTCCCT 60.845 55.000 0.00 0.00 0.00 4.20
480 481 0.679960 GTGGCATGGTTGGTACTCCC 60.680 60.000 0.00 0.00 0.00 4.30
481 482 0.328258 AGTGGCATGGTTGGTACTCC 59.672 55.000 0.00 0.00 0.00 3.85
482 483 3.118408 TGATAGTGGCATGGTTGGTACTC 60.118 47.826 0.00 0.00 0.00 2.59
483 484 2.843730 TGATAGTGGCATGGTTGGTACT 59.156 45.455 0.00 0.00 0.00 2.73
484 485 3.206150 CTGATAGTGGCATGGTTGGTAC 58.794 50.000 0.00 0.00 0.00 3.34
485 486 2.843730 ACTGATAGTGGCATGGTTGGTA 59.156 45.455 0.00 0.00 0.00 3.25
486 487 1.635487 ACTGATAGTGGCATGGTTGGT 59.365 47.619 0.00 0.00 0.00 3.67
487 488 2.019249 CACTGATAGTGGCATGGTTGG 58.981 52.381 0.00 0.00 42.35 3.77
501 502 1.827344 TCGCTGATGTTCTCCACTGAT 59.173 47.619 0.00 0.00 0.00 2.90
510 511 2.744202 ACTTGGTTGATCGCTGATGTTC 59.256 45.455 0.00 0.00 0.00 3.18
515 516 4.002906 ACTTAACTTGGTTGATCGCTGA 57.997 40.909 0.00 0.00 0.00 4.26
516 517 4.929808 AGTACTTAACTTGGTTGATCGCTG 59.070 41.667 0.00 0.00 33.35 5.18
518 519 4.031426 CGAGTACTTAACTTGGTTGATCGC 59.969 45.833 0.00 0.00 39.07 4.58
538 539 1.067071 GGTCCAACCTTACCAGACGAG 60.067 57.143 0.00 0.00 34.73 4.18
539 540 0.971386 GGTCCAACCTTACCAGACGA 59.029 55.000 0.00 0.00 34.73 4.20
541 542 1.061546 TGGGTCCAACCTTACCAGAC 58.938 55.000 0.00 0.00 38.64 3.51
589 593 1.468914 CCCCAAGACTAAAAAGCGCTC 59.531 52.381 12.06 0.00 0.00 5.03
601 605 2.498078 AGAAAGTCTCGATCCCCAAGAC 59.502 50.000 0.00 0.00 39.76 3.01
646 664 0.390603 TATTCACCAACCGGCTCACG 60.391 55.000 0.00 0.00 43.80 4.35
664 765 3.819337 GCTCACGGTGTCATATAGGAGTA 59.181 47.826 8.17 0.00 0.00 2.59
665 766 2.623889 GCTCACGGTGTCATATAGGAGT 59.376 50.000 8.17 0.00 0.00 3.85
668 769 2.864097 GCAGCTCACGGTGTCATATAGG 60.864 54.545 8.17 0.00 40.67 2.57
724 872 1.699634 TCCATCCATAGGGCTGTTAGC 59.300 52.381 0.00 0.00 41.46 3.09
726 874 3.584406 CTCATCCATCCATAGGGCTGTTA 59.416 47.826 0.00 0.00 0.00 2.41
734 886 1.339824 GCTGGCCTCATCCATCCATAG 60.340 57.143 3.32 0.00 35.22 2.23
820 990 1.131126 CTTTCGCTTGGCCATGTACTG 59.869 52.381 19.05 7.94 0.00 2.74
825 995 1.679139 TATCCTTTCGCTTGGCCATG 58.321 50.000 6.09 11.02 0.00 3.66
826 996 2.233271 CATATCCTTTCGCTTGGCCAT 58.767 47.619 6.09 0.00 0.00 4.40
840 1019 0.039074 CGACTCGGCTGTCCATATCC 60.039 60.000 0.00 0.00 33.70 2.59
892 1223 4.602259 CCAGGTGGTCGCGTGTGT 62.602 66.667 5.77 0.00 0.00 3.72
910 1268 3.277602 TAGCTCCGTCGCTAGCCG 61.278 66.667 9.66 7.82 41.30 5.52
912 1270 1.280444 GAGTAGCTCCGTCGCTAGC 59.720 63.158 4.06 4.06 42.69 3.42
913 1271 1.152989 ACGAGTAGCTCCGTCGCTAG 61.153 60.000 11.13 0.00 42.69 3.42
914 1272 1.150567 GACGAGTAGCTCCGTCGCTA 61.151 60.000 16.63 0.00 44.23 4.26
915 1273 2.436292 ACGAGTAGCTCCGTCGCT 60.436 61.111 11.13 1.26 43.83 4.93
919 1277 1.802136 CGAGTAGACGAGTAGCTCCGT 60.802 57.143 8.20 8.20 42.17 4.69
920 1278 0.854062 CGAGTAGACGAGTAGCTCCG 59.146 60.000 0.00 0.00 35.09 4.63
921 1279 1.860326 GACGAGTAGACGAGTAGCTCC 59.140 57.143 0.00 0.00 37.03 4.70
932 1290 3.604629 GGCAGGCAGACGAGTAGA 58.395 61.111 0.00 0.00 0.00 2.59
950 1308 6.651225 GGTGTTTATATAATGGAGTCTGGAGC 59.349 42.308 0.00 0.00 0.00 4.70
963 1324 6.887002 TGTGAGCATGGTTGGTGTTTATATAA 59.113 34.615 0.00 0.00 32.62 0.98
984 1346 4.248842 CTGGTGCCGGGTGTGTGA 62.249 66.667 2.18 0.00 0.00 3.58
995 1357 3.364441 TTGTGATGCCGCTGGTGC 61.364 61.111 0.00 0.00 0.00 5.01
1042 1404 1.482593 GAAGGAGCTAGCTAGGCACAA 59.517 52.381 19.38 0.00 0.00 3.33
1064 1430 2.722201 CGGTCACCTACTGGGAGCC 61.722 68.421 0.00 0.00 38.76 4.70
1076 1442 1.804748 GAATCTGTGGGAAACGGTCAC 59.195 52.381 0.00 0.00 36.45 3.67
1077 1443 1.271163 GGAATCTGTGGGAAACGGTCA 60.271 52.381 0.00 0.00 36.45 4.02
1080 1446 1.739067 GAGGAATCTGTGGGAAACGG 58.261 55.000 0.00 0.00 36.38 4.44
1108 1481 2.745152 CGAAGAACAGGGAACTTGTGGT 60.745 50.000 0.00 0.00 40.21 4.16
1114 1487 1.269998 CGAGTCGAAGAACAGGGAACT 59.730 52.381 6.73 0.00 39.96 3.01
1248 1723 0.948623 TTGCACACGAACTGATCCCG 60.949 55.000 0.00 0.00 0.00 5.14
1382 1869 0.324943 TAGCACTCTTGGGCTTGACC 59.675 55.000 0.00 0.00 41.41 4.02
1509 2002 2.048222 CTCGAGCAGAACGGGCAA 60.048 61.111 0.00 0.00 0.00 4.52
1553 2049 6.509418 AAACTCTGCACTAGAAGTCTAGAG 57.491 41.667 19.82 13.78 46.80 2.43
1598 2107 6.237901 TGGTTAACACCTAACTACTACGAGA 58.762 40.000 8.10 0.00 44.61 4.04
1809 2442 1.341531 CGGAAGTGCTCATAGGGGTAG 59.658 57.143 0.00 0.00 0.00 3.18
1814 2447 2.034053 GTCTCTCGGAAGTGCTCATAGG 59.966 54.545 0.00 0.00 0.00 2.57
1855 2488 4.212636 CCTACGGTGACTTCGTCAAATTTT 59.787 41.667 0.00 0.00 44.49 1.82
1948 2591 7.668469 CCAATTAGGTTTAAAGTCCTGGTACTT 59.332 37.037 7.47 5.92 41.46 2.24
1951 2594 5.947566 GCCAATTAGGTTTAAAGTCCTGGTA 59.052 40.000 7.47 0.00 40.61 3.25
1962 2605 4.141111 GGTATCCCCAGCCAATTAGGTTTA 60.141 45.833 0.00 0.00 40.61 2.01
1968 2611 2.174639 CAGTGGTATCCCCAGCCAATTA 59.825 50.000 0.00 0.00 46.45 1.40
1969 2612 1.063717 CAGTGGTATCCCCAGCCAATT 60.064 52.381 0.00 0.00 46.45 2.32
1972 2616 1.229820 ACAGTGGTATCCCCAGCCA 60.230 57.895 0.00 0.00 46.45 4.75
1978 2622 3.640498 GGTTAGTAGGACAGTGGTATCCC 59.360 52.174 0.00 0.00 35.38 3.85
1994 2638 3.876309 ACTTGTGGTTGGATGGTTAGT 57.124 42.857 0.00 0.00 0.00 2.24
2008 2652 6.647212 TGAGAATATGCGAACTAACTTGTG 57.353 37.500 0.00 0.00 0.00 3.33
2016 2660 6.479990 TCGAATCAATTGAGAATATGCGAACT 59.520 34.615 14.54 0.00 0.00 3.01
2065 2870 7.246171 ACTACAGGTAATTATGGGCATAGAG 57.754 40.000 0.00 0.00 0.00 2.43
2075 2880 6.549433 TGTTTCGGGACTACAGGTAATTAT 57.451 37.500 0.00 0.00 0.00 1.28
2196 3011 8.850156 ACAGCAAAAGTACAACAAGAAATCTAT 58.150 29.630 0.00 0.00 0.00 1.98
2266 3082 2.404215 CACACCACCTCTACGTTTGAG 58.596 52.381 0.00 1.88 0.00 3.02
2270 3086 0.756903 AAGCACACCACCTCTACGTT 59.243 50.000 0.00 0.00 0.00 3.99
2275 3091 1.228063 CAGCAAGCACACCACCTCT 60.228 57.895 0.00 0.00 0.00 3.69
2307 3123 2.659897 CAGATCGCAGTAGCCGGC 60.660 66.667 21.89 21.89 37.52 6.13
2310 3126 2.659897 CGCCAGATCGCAGTAGCC 60.660 66.667 0.00 0.00 37.52 3.93
2312 3128 0.039978 CTACCGCCAGATCGCAGTAG 60.040 60.000 2.76 2.76 0.00 2.57
2320 3136 2.210711 GCCCTAGCTACCGCCAGAT 61.211 63.158 0.00 0.00 36.60 2.90
2334 3150 3.462199 GAGCGGCTAAATCGGCCCT 62.462 63.158 0.60 0.00 46.24 5.19
2339 3155 3.225758 GCTCGAGCGGCTAAATCG 58.774 61.111 23.61 2.24 37.79 3.34
2407 3223 1.972198 CTAACTCCACCAGCCGACA 59.028 57.895 0.00 0.00 0.00 4.35
2413 3229 1.091771 CATGCCGCTAACTCCACCAG 61.092 60.000 0.00 0.00 0.00 4.00
2426 3242 2.476534 GAAACACCACTGCCATGCCG 62.477 60.000 0.00 0.00 0.00 5.69
2436 3252 1.298859 CGCTAGGGCAGAAACACCAC 61.299 60.000 0.00 0.00 38.60 4.16
2442 3258 1.165270 GAAAAGCGCTAGGGCAGAAA 58.835 50.000 30.70 0.00 38.60 2.52
2445 3261 1.696832 GACGAAAAGCGCTAGGGCAG 61.697 60.000 30.70 18.44 46.04 4.85
2446 3262 1.740296 GACGAAAAGCGCTAGGGCA 60.740 57.895 30.70 0.00 46.04 5.36
2448 3264 2.165301 CGGACGAAAAGCGCTAGGG 61.165 63.158 12.05 1.65 46.04 3.53
2461 3277 0.094730 GAAAGACGAATTGGCGGACG 59.905 55.000 0.00 0.00 35.12 4.79
2479 3295 2.073252 AGAGGTCGACATATGGCTGA 57.927 50.000 18.91 2.96 0.00 4.26
2522 3338 0.526524 GATCTCCAGCACGAAGACCG 60.527 60.000 0.00 0.00 45.44 4.79
2523 3339 0.820871 AGATCTCCAGCACGAAGACC 59.179 55.000 0.00 0.00 0.00 3.85
2530 3346 6.155827 GTCAATCTGTATAGATCTCCAGCAC 58.844 44.000 0.00 0.00 42.80 4.40
2531 3347 5.048434 CGTCAATCTGTATAGATCTCCAGCA 60.048 44.000 0.00 0.00 42.80 4.41
2534 3350 7.665974 ACATACGTCAATCTGTATAGATCTCCA 59.334 37.037 0.00 0.00 42.80 3.86
2543 3359 3.639538 GGCGACATACGTCAATCTGTAT 58.360 45.455 0.00 0.00 46.56 2.29
2553 3369 0.468585 TATCCAGGGGCGACATACGT 60.469 55.000 0.00 0.00 44.60 3.57
2569 3385 5.471456 ACGGAGCATTTTTGATCTGGATATC 59.529 40.000 5.20 0.00 35.12 1.63
2575 3391 3.504863 CCAACGGAGCATTTTTGATCTG 58.495 45.455 0.00 0.00 36.71 2.90
2581 3397 4.963815 CGCCAACGGAGCATTTTT 57.036 50.000 0.00 0.00 34.97 1.94
2591 3407 2.666022 TGATAATATGATCGCGCCAACG 59.334 45.455 0.00 0.00 44.07 4.10
2593 3409 3.435327 GGTTGATAATATGATCGCGCCAA 59.565 43.478 0.00 0.00 0.00 4.52
2595 3411 3.000041 TGGTTGATAATATGATCGCGCC 59.000 45.455 0.00 0.00 0.00 6.53
2597 3413 5.006068 CCTGATGGTTGATAATATGATCGCG 59.994 44.000 0.00 0.00 0.00 5.87
2611 3427 3.490348 CCTAATAAGGCCCTGATGGTTG 58.510 50.000 0.00 0.00 35.64 3.77
2613 3429 2.065799 CCCTAATAAGGCCCTGATGGT 58.934 52.381 0.00 0.00 42.14 3.55
2650 3466 2.285834 CGCATGACACCGATAAGAAAGC 60.286 50.000 0.00 0.00 0.00 3.51
2665 3481 3.866883 TGACTTAGACATGTCGCATGA 57.133 42.857 19.85 5.08 36.10 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.