Multiple sequence alignment - TraesCS5D01G489700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G489700 chr5D 100.000 3461 0 0 775 4235 524586426 524589886 0.000000e+00 6392.0
1 TraesCS5D01G489700 chr5D 100.000 390 0 0 1 390 524585652 524586041 0.000000e+00 721.0
2 TraesCS5D01G489700 chr5D 92.058 277 20 2 3795 4070 486833041 486832766 5.130000e-104 388.0
3 TraesCS5D01G489700 chr5A 90.457 3039 181 36 805 3786 650834119 650837105 0.000000e+00 3904.0
4 TraesCS5D01G489700 chr5A 94.366 213 11 1 156 368 650833618 650833829 4.080000e-85 326.0
5 TraesCS5D01G489700 chr5A 91.111 135 4 4 1 134 650832236 650832363 4.350000e-40 176.0
6 TraesCS5D01G489700 chr6A 88.840 914 80 9 791 1700 128940566 128939671 0.000000e+00 1103.0
7 TraesCS5D01G489700 chr3D 88.248 919 59 22 787 1700 599592459 599593333 0.000000e+00 1053.0
8 TraesCS5D01G489700 chr3D 90.012 821 71 4 787 1603 494416685 494417498 0.000000e+00 1051.0
9 TraesCS5D01G489700 chr3D 96.163 443 17 0 3793 4235 47138015 47138457 0.000000e+00 725.0
10 TraesCS5D01G489700 chr5B 86.448 974 73 22 1438 2395 659170018 659170948 0.000000e+00 1013.0
11 TraesCS5D01G489700 chr5B 94.219 640 28 6 2843 3480 659171596 659172228 0.000000e+00 968.0
12 TraesCS5D01G489700 chr5B 89.810 579 32 6 2280 2846 659170922 659171485 0.000000e+00 717.0
13 TraesCS5D01G489700 chr5B 92.902 479 27 3 2523 2996 659185004 659185480 0.000000e+00 689.0
14 TraesCS5D01G489700 chr5B 94.754 305 6 8 3188 3490 659185477 659185773 2.310000e-127 466.0
15 TraesCS5D01G489700 chr2A 90.374 748 63 8 848 1588 508447990 508448735 0.000000e+00 974.0
16 TraesCS5D01G489700 chr7A 90.515 738 63 6 848 1580 512022356 512023091 0.000000e+00 968.0
17 TraesCS5D01G489700 chr7A 88.699 584 49 7 790 1368 63326648 63326077 0.000000e+00 697.0
18 TraesCS5D01G489700 chr7B 90.040 753 64 10 843 1588 186146919 186146171 0.000000e+00 965.0
19 TraesCS5D01G489700 chr7B 89.815 108 2 6 1593 1700 714201327 714201425 3.440000e-26 130.0
20 TraesCS5D01G489700 chr3A 90.214 746 63 9 851 1588 55832767 55832024 0.000000e+00 965.0
21 TraesCS5D01G489700 chr3A 90.120 749 64 9 848 1588 698010554 698011300 0.000000e+00 965.0
22 TraesCS5D01G489700 chr3A 92.857 42 1 2 86 127 593969968 593969929 4.570000e-05 60.2
23 TraesCS5D01G489700 chr3A 100.000 29 0 0 59 87 153655112 153655084 2.000000e-03 54.7
24 TraesCS5D01G489700 chr3A 100.000 29 0 0 99 127 437874652 437874680 2.000000e-03 54.7
25 TraesCS5D01G489700 chr2B 92.360 445 34 0 3791 4235 682131433 682131877 5.970000e-178 634.0
26 TraesCS5D01G489700 chr2B 85.747 442 57 6 3796 4235 672636451 672636014 2.980000e-126 462.0
27 TraesCS5D01G489700 chr7D 91.011 445 39 1 3791 4235 126879111 126879554 2.180000e-167 599.0
28 TraesCS5D01G489700 chr7D 89.796 49 4 1 98 145 419793154 419793106 1.270000e-05 62.1
29 TraesCS5D01G489700 chr4D 91.724 435 28 6 3795 4226 273915089 273914660 7.840000e-167 597.0
30 TraesCS5D01G489700 chr4D 92.857 42 3 0 98 139 450203747 450203706 1.270000e-05 62.1
31 TraesCS5D01G489700 chr4D 100.000 31 0 0 98 128 358476879 358476849 1.640000e-04 58.4
32 TraesCS5D01G489700 chr1D 90.068 443 40 4 3795 4235 8013781 8013341 4.750000e-159 571.0
33 TraesCS5D01G489700 chr1B 87.585 443 32 5 3793 4235 658482217 658481798 3.800000e-135 492.0
34 TraesCS5D01G489700 chr1B 89.643 280 21 5 3792 4070 280756944 280756672 2.420000e-92 350.0
35 TraesCS5D01G489700 chr6D 89.493 276 25 4 3797 4070 7294087 7294360 3.130000e-91 346.0
36 TraesCS5D01G489700 chr4A 89.333 150 15 1 4086 4235 46147655 46147803 2.010000e-43 187.0
37 TraesCS5D01G489700 chr4A 97.143 35 0 1 94 128 106905680 106905713 1.640000e-04 58.4
38 TraesCS5D01G489700 chr4B 88.667 150 16 1 4086 4235 515071284 515071136 9.350000e-42 182.0
39 TraesCS5D01G489700 chr3B 89.815 108 2 6 1593 1700 752203616 752203714 3.440000e-26 130.0
40 TraesCS5D01G489700 chr3B 100.000 30 0 0 98 127 48786320 48786349 5.920000e-04 56.5
41 TraesCS5D01G489700 chr2D 90.476 42 2 2 95 135 5309554 5309594 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G489700 chr5D 524585652 524589886 4234 False 3556.500000 6392 100.000 1 4235 2 chr5D.!!$F1 4234
1 TraesCS5D01G489700 chr5A 650832236 650837105 4869 False 1468.666667 3904 91.978 1 3786 3 chr5A.!!$F1 3785
2 TraesCS5D01G489700 chr6A 128939671 128940566 895 True 1103.000000 1103 88.840 791 1700 1 chr6A.!!$R1 909
3 TraesCS5D01G489700 chr3D 599592459 599593333 874 False 1053.000000 1053 88.248 787 1700 1 chr3D.!!$F3 913
4 TraesCS5D01G489700 chr3D 494416685 494417498 813 False 1051.000000 1051 90.012 787 1603 1 chr3D.!!$F2 816
5 TraesCS5D01G489700 chr5B 659170018 659172228 2210 False 899.333333 1013 90.159 1438 3480 3 chr5B.!!$F1 2042
6 TraesCS5D01G489700 chr5B 659185004 659185773 769 False 577.500000 689 93.828 2523 3490 2 chr5B.!!$F2 967
7 TraesCS5D01G489700 chr2A 508447990 508448735 745 False 974.000000 974 90.374 848 1588 1 chr2A.!!$F1 740
8 TraesCS5D01G489700 chr7A 512022356 512023091 735 False 968.000000 968 90.515 848 1580 1 chr7A.!!$F1 732
9 TraesCS5D01G489700 chr7A 63326077 63326648 571 True 697.000000 697 88.699 790 1368 1 chr7A.!!$R1 578
10 TraesCS5D01G489700 chr7B 186146171 186146919 748 True 965.000000 965 90.040 843 1588 1 chr7B.!!$R1 745
11 TraesCS5D01G489700 chr3A 55832024 55832767 743 True 965.000000 965 90.214 851 1588 1 chr3A.!!$R1 737
12 TraesCS5D01G489700 chr3A 698010554 698011300 746 False 965.000000 965 90.120 848 1588 1 chr3A.!!$F2 740

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
843 2088 1.726322 GAGATCGATCGGGCGAACG 60.726 63.158 19.33 0.0 44.22 3.95 F
1413 2685 0.520847 GAGCAAGCTCTTGTTCCTGC 59.479 55.000 14.52 0.0 42.52 4.85 F
1972 3263 0.836606 TGGGAGTGCTTGTGTGAAGA 59.163 50.000 0.00 0.0 0.00 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1972 3263 0.397941 CCCACGGCCATGACTCATAT 59.602 55.000 0.0 0.00 0.00 1.78 R
2722 4128 1.270358 TGCATGCAAGCAATTGAGCAA 60.270 42.857 20.3 5.96 42.46 3.91 R
3910 5446 0.034089 ACCCTCTAATGCAGGCAACC 60.034 55.000 0.0 0.00 37.17 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
119 120 5.873712 TGTTGAACTAAAACCACGACACTTA 59.126 36.000 0.00 0.00 0.00 2.24
120 121 5.971895 TGAACTAAAACCACGACACTTAC 57.028 39.130 0.00 0.00 0.00 2.34
130 132 3.813166 CCACGACACTTACTTTGGAATGT 59.187 43.478 0.00 0.00 0.00 2.71
134 136 4.630069 CGACACTTACTTTGGAATGTAGGG 59.370 45.833 0.00 0.00 0.00 3.53
137 139 5.163131 ACACTTACTTTGGAATGTAGGGTGT 60.163 40.000 13.80 13.80 35.39 4.16
139 141 6.370718 CACTTACTTTGGAATGTAGGGTGTAC 59.629 42.308 0.00 0.00 0.00 2.90
142 144 5.697067 ACTTTGGAATGTAGGGTGTACAAA 58.303 37.500 0.00 0.00 0.00 2.83
143 145 6.130569 ACTTTGGAATGTAGGGTGTACAAAA 58.869 36.000 0.00 0.00 0.00 2.44
144 146 6.608002 ACTTTGGAATGTAGGGTGTACAAAAA 59.392 34.615 0.00 0.00 0.00 1.94
145 147 7.289084 ACTTTGGAATGTAGGGTGTACAAAAAT 59.711 33.333 0.00 0.00 0.00 1.82
146 148 6.582677 TGGAATGTAGGGTGTACAAAAATG 57.417 37.500 0.00 0.00 0.00 2.32
147 149 6.307776 TGGAATGTAGGGTGTACAAAAATGA 58.692 36.000 0.00 0.00 0.00 2.57
148 150 6.951198 TGGAATGTAGGGTGTACAAAAATGAT 59.049 34.615 0.00 0.00 0.00 2.45
149 151 7.453126 TGGAATGTAGGGTGTACAAAAATGATT 59.547 33.333 0.00 0.00 0.00 2.57
150 152 7.759433 GGAATGTAGGGTGTACAAAAATGATTG 59.241 37.037 0.00 0.00 36.37 2.67
151 153 7.775053 ATGTAGGGTGTACAAAAATGATTGT 57.225 32.000 0.00 2.39 45.14 2.71
152 154 7.589958 TGTAGGGTGTACAAAAATGATTGTT 57.410 32.000 0.00 0.00 40.52 2.83
153 155 8.012957 TGTAGGGTGTACAAAAATGATTGTTT 57.987 30.769 0.00 0.00 40.52 2.83
154 156 8.478877 TGTAGGGTGTACAAAAATGATTGTTTT 58.521 29.630 0.00 0.00 40.52 2.43
242 1477 7.707624 ATGAAAAGAAGGAATGCTTGTCATA 57.292 32.000 0.00 0.00 43.67 2.15
368 1603 8.966069 AAAAATCCGAATAAAAACCAGGAAAA 57.034 26.923 0.00 0.00 0.00 2.29
369 1604 7.956420 AAATCCGAATAAAAACCAGGAAAAC 57.044 32.000 0.00 0.00 0.00 2.43
370 1605 5.110940 TCCGAATAAAAACCAGGAAAACG 57.889 39.130 0.00 0.00 0.00 3.60
371 1606 4.579753 TCCGAATAAAAACCAGGAAAACGT 59.420 37.500 0.00 0.00 0.00 3.99
372 1607 4.913345 CCGAATAAAAACCAGGAAAACGTC 59.087 41.667 0.00 0.00 0.00 4.34
373 1608 5.505985 CCGAATAAAAACCAGGAAAACGTCA 60.506 40.000 0.00 0.00 0.00 4.35
374 1609 5.623673 CGAATAAAAACCAGGAAAACGTCAG 59.376 40.000 0.00 0.00 0.00 3.51
375 1610 6.512091 CGAATAAAAACCAGGAAAACGTCAGA 60.512 38.462 0.00 0.00 0.00 3.27
376 1611 4.632538 AAAAACCAGGAAAACGTCAGAG 57.367 40.909 0.00 0.00 0.00 3.35
377 1612 3.553828 AAACCAGGAAAACGTCAGAGA 57.446 42.857 0.00 0.00 0.00 3.10
378 1613 2.821991 ACCAGGAAAACGTCAGAGAG 57.178 50.000 0.00 0.00 0.00 3.20
379 1614 2.317040 ACCAGGAAAACGTCAGAGAGA 58.683 47.619 0.00 0.00 0.00 3.10
380 1615 2.297597 ACCAGGAAAACGTCAGAGAGAG 59.702 50.000 0.00 0.00 0.00 3.20
381 1616 2.558795 CCAGGAAAACGTCAGAGAGAGA 59.441 50.000 0.00 0.00 0.00 3.10
382 1617 3.366883 CCAGGAAAACGTCAGAGAGAGAG 60.367 52.174 0.00 0.00 0.00 3.20
383 1618 3.504134 CAGGAAAACGTCAGAGAGAGAGA 59.496 47.826 0.00 0.00 0.00 3.10
384 1619 3.756434 AGGAAAACGTCAGAGAGAGAGAG 59.244 47.826 0.00 0.00 0.00 3.20
385 1620 3.754323 GGAAAACGTCAGAGAGAGAGAGA 59.246 47.826 0.00 0.00 0.00 3.10
386 1621 4.142687 GGAAAACGTCAGAGAGAGAGAGAG 60.143 50.000 0.00 0.00 0.00 3.20
387 1622 3.973206 AACGTCAGAGAGAGAGAGAGA 57.027 47.619 0.00 0.00 0.00 3.10
388 1623 3.526931 ACGTCAGAGAGAGAGAGAGAG 57.473 52.381 0.00 0.00 0.00 3.20
389 1624 3.096852 ACGTCAGAGAGAGAGAGAGAGA 58.903 50.000 0.00 0.00 0.00 3.10
843 2088 1.726322 GAGATCGATCGGGCGAACG 60.726 63.158 19.33 0.00 44.22 3.95
844 2089 3.395687 GATCGATCGGGCGAACGC 61.396 66.667 16.41 10.81 44.22 4.84
1258 2525 0.818296 AATCTAGCCGCTCGTGTTCT 59.182 50.000 0.00 0.00 0.00 3.01
1285 2554 3.653539 TTAGTGCGTGCTCTGTAAGAA 57.346 42.857 6.68 0.00 46.34 2.52
1290 2559 1.989165 GCGTGCTCTGTAAGAAGAGTG 59.011 52.381 3.37 0.00 46.34 3.51
1296 2566 1.276421 TCTGTAAGAAGAGTGGCCTGC 59.724 52.381 3.32 0.00 42.31 4.85
1315 2586 4.098349 CCTGCTCCTGCTTGCAAATTATAA 59.902 41.667 0.00 0.00 38.81 0.98
1318 2589 6.642430 TGCTCCTGCTTGCAAATTATAAAAT 58.358 32.000 0.00 0.00 40.48 1.82
1413 2685 0.520847 GAGCAAGCTCTTGTTCCTGC 59.479 55.000 14.52 0.00 42.52 4.85
1430 2702 1.344438 CTGCAACTGTCTGTCCTGGTA 59.656 52.381 0.00 0.00 0.00 3.25
1435 2707 4.392138 GCAACTGTCTGTCCTGGTATTAAC 59.608 45.833 0.00 0.00 0.00 2.01
1436 2708 5.547465 CAACTGTCTGTCCTGGTATTAACA 58.453 41.667 0.00 0.00 0.00 2.41
1444 2716 5.250200 TGTCCTGGTATTAACAAAATCGCT 58.750 37.500 0.00 0.00 0.00 4.93
1536 2809 5.574188 ACTGAATCAGGATTAAGCAAACCT 58.426 37.500 15.38 0.00 33.40 3.50
1537 2810 6.721318 ACTGAATCAGGATTAAGCAAACCTA 58.279 36.000 15.38 0.00 33.40 3.08
1672 2946 5.584649 CCTTACACAGCATTTCTCCGATTTA 59.415 40.000 0.00 0.00 0.00 1.40
1718 2995 3.261981 ACCTTGTTGTGACTCGTCTTT 57.738 42.857 0.00 0.00 0.00 2.52
1719 2996 3.606687 ACCTTGTTGTGACTCGTCTTTT 58.393 40.909 0.00 0.00 0.00 2.27
1774 3051 4.178956 TCCAGCTTTAGGTTTTTCTGGT 57.821 40.909 6.05 0.00 41.24 4.00
1822 3109 9.685828 GCAATCACTTACAAAGTTTATTTACCA 57.314 29.630 0.00 0.00 40.46 3.25
1896 3183 1.279271 ACCACTAGCTTCATCACCACC 59.721 52.381 0.00 0.00 0.00 4.61
1919 3206 7.259290 CCATTGGGTATGTACTGTACAATTC 57.741 40.000 23.03 15.41 42.76 2.17
1921 3208 7.201696 CCATTGGGTATGTACTGTACAATTCAC 60.202 40.741 23.03 16.78 42.76 3.18
1922 3209 6.361768 TGGGTATGTACTGTACAATTCACA 57.638 37.500 23.03 18.75 42.76 3.58
1958 3249 9.014297 GTTGGGAATTATTATTCTACATGGGAG 57.986 37.037 4.57 0.00 40.07 4.30
1972 3263 0.836606 TGGGAGTGCTTGTGTGAAGA 59.163 50.000 0.00 0.00 0.00 2.87
1978 3269 4.569966 GGAGTGCTTGTGTGAAGATATGAG 59.430 45.833 0.00 0.00 0.00 2.90
1984 3275 5.007430 GCTTGTGTGAAGATATGAGTCATGG 59.993 44.000 16.15 0.00 0.00 3.66
2352 3736 6.821160 TGTTCGCAGACATAAGAAATTGGATA 59.179 34.615 0.00 0.00 34.32 2.59
2452 3836 7.202011 GCAAAAGGGTATACTCTTCTATCCTGA 60.202 40.741 18.33 0.00 28.72 3.86
2483 3879 6.993079 TGTTCTGTAGCTGTTTCATCTTAGA 58.007 36.000 0.00 0.00 0.00 2.10
2492 3888 8.345724 AGCTGTTTCATCTTAGATTCATGTTT 57.654 30.769 0.00 0.00 0.00 2.83
2493 3889 8.800332 AGCTGTTTCATCTTAGATTCATGTTTT 58.200 29.630 0.00 0.00 0.00 2.43
2686 4092 7.587757 GCTTACAGTTTACATTCAGTTTGTCAG 59.412 37.037 0.00 0.00 0.00 3.51
2736 4142 6.849502 TCTCTCTTATTTGCTCAATTGCTTG 58.150 36.000 0.00 0.00 0.00 4.01
2764 4170 1.754201 GCTGTTCCCACTTCAAAGGGT 60.754 52.381 0.00 0.00 45.64 4.34
2922 4442 3.819652 AGTGGTGCCCAACTGCCA 61.820 61.111 0.00 0.00 34.18 4.92
2951 4471 2.164219 AGCATTTGTTTCCCACGCATAG 59.836 45.455 0.00 0.00 0.00 2.23
3082 4602 3.493350 CCAAGACTGAGGTATCCCAATCG 60.493 52.174 0.00 0.00 0.00 3.34
3120 4640 1.003839 ATCTTTGCGCTTCCCACGA 60.004 52.632 9.73 0.00 0.00 4.35
3121 4641 1.298859 ATCTTTGCGCTTCCCACGAC 61.299 55.000 9.73 0.00 0.00 4.34
3213 4733 4.315588 GCAGCAGCAGGACAGAAT 57.684 55.556 0.00 0.00 41.58 2.40
3279 4801 1.959226 GATGGTTGCGACACGGTGT 60.959 57.895 14.66 14.66 0.00 4.16
3362 4885 5.596845 GCTGTTGTTAGGATTTGGACAAAA 58.403 37.500 1.17 0.00 34.20 2.44
3405 4929 3.350219 ACTTTGCAGTATCGGTGGAAT 57.650 42.857 0.00 0.00 0.00 3.01
3406 4930 3.686016 ACTTTGCAGTATCGGTGGAATT 58.314 40.909 0.00 0.00 0.00 2.17
3439 4963 5.936686 TTTCTTGAGATGAAACTCTGCTG 57.063 39.130 0.00 0.00 37.73 4.41
3440 4964 3.332919 TCTTGAGATGAAACTCTGCTGC 58.667 45.455 0.00 0.00 37.73 5.25
3441 4965 3.007723 TCTTGAGATGAAACTCTGCTGCT 59.992 43.478 0.00 0.00 37.73 4.24
3472 4996 3.464207 CCGCTAAACCCGGTACAAT 57.536 52.632 0.00 0.00 40.84 2.71
3474 4998 2.903798 CCGCTAAACCCGGTACAATAA 58.096 47.619 0.00 0.00 40.84 1.40
3475 4999 3.469739 CCGCTAAACCCGGTACAATAAT 58.530 45.455 0.00 0.00 40.84 1.28
3476 5000 3.495753 CCGCTAAACCCGGTACAATAATC 59.504 47.826 0.00 0.00 40.84 1.75
3542 5066 4.261155 CGTCCGTATCCATCAATTTTGCAT 60.261 41.667 0.00 0.00 0.00 3.96
3566 5090 5.690409 TCAGTATGCTTATTAACGTAGCAGC 59.310 40.000 14.65 10.20 46.86 5.25
3567 5091 5.462068 CAGTATGCTTATTAACGTAGCAGCA 59.538 40.000 14.65 11.90 46.86 4.41
3600 5136 0.983905 TTACCCCGCTTGCATCCCTA 60.984 55.000 0.00 0.00 0.00 3.53
3605 5141 2.555227 CCCCGCTTGCATCCCTATAATT 60.555 50.000 0.00 0.00 0.00 1.40
3619 5155 4.578928 CCCTATAATTGGGGAAGTTTGTCG 59.421 45.833 7.04 0.00 46.62 4.35
3626 5162 1.301479 GGAAGTTTGTCGACCGCCT 60.301 57.895 14.12 2.48 0.00 5.52
3637 5173 0.039074 CGACCGCCTCTCATGGTATC 60.039 60.000 0.00 0.00 35.75 2.24
3638 5174 1.333177 GACCGCCTCTCATGGTATCT 58.667 55.000 0.00 0.00 35.75 1.98
3639 5175 1.000283 GACCGCCTCTCATGGTATCTG 60.000 57.143 0.00 0.00 35.75 2.90
3640 5176 0.319728 CCGCCTCTCATGGTATCTGG 59.680 60.000 0.00 0.00 0.00 3.86
3641 5177 0.319728 CGCCTCTCATGGTATCTGGG 59.680 60.000 0.00 0.00 0.00 4.45
3642 5178 1.722034 GCCTCTCATGGTATCTGGGA 58.278 55.000 0.00 0.00 0.00 4.37
3643 5179 2.050144 GCCTCTCATGGTATCTGGGAA 58.950 52.381 0.00 0.00 0.00 3.97
3644 5180 2.224402 GCCTCTCATGGTATCTGGGAAC 60.224 54.545 0.00 0.00 0.00 3.62
3645 5181 3.312890 CCTCTCATGGTATCTGGGAACT 58.687 50.000 0.00 0.00 0.00 3.01
3646 5182 3.323403 CCTCTCATGGTATCTGGGAACTC 59.677 52.174 0.00 0.00 0.00 3.01
3647 5183 3.309296 TCTCATGGTATCTGGGAACTCC 58.691 50.000 0.00 0.00 0.00 3.85
3672 5208 1.907739 CACCCCTAGCTGCTAGCAA 59.092 57.895 27.29 2.79 45.56 3.91
3711 5247 1.377725 CCTGTGGGCAAAGCTCGAT 60.378 57.895 0.00 0.00 0.00 3.59
3720 5256 4.105486 GGGCAAAGCTCGATTGTAAAATC 58.895 43.478 0.00 0.00 0.00 2.17
3728 5264 6.789262 AGCTCGATTGTAAAATCAATGAAGG 58.211 36.000 6.45 0.00 38.03 3.46
3729 5265 6.599244 AGCTCGATTGTAAAATCAATGAAGGA 59.401 34.615 6.45 0.00 38.03 3.36
3730 5266 7.121168 AGCTCGATTGTAAAATCAATGAAGGAA 59.879 33.333 6.45 0.00 38.03 3.36
3732 5268 8.335532 TCGATTGTAAAATCAATGAAGGAACT 57.664 30.769 6.45 0.00 38.12 3.01
3733 5269 8.792633 TCGATTGTAAAATCAATGAAGGAACTT 58.207 29.630 6.45 0.00 44.04 2.66
3757 5293 2.219875 CCAGAGACACAGGTGGCCT 61.220 63.158 3.32 0.00 40.19 5.19
3786 5322 2.294979 TGATCAAATGCAGGCTAGCTG 58.705 47.619 15.72 11.82 34.99 4.24
3787 5323 2.092807 TGATCAAATGCAGGCTAGCTGA 60.093 45.455 15.72 8.86 34.99 4.26
3788 5324 2.723322 TCAAATGCAGGCTAGCTGAT 57.277 45.000 15.72 0.00 34.99 2.90
3789 5325 2.294979 TCAAATGCAGGCTAGCTGATG 58.705 47.619 15.72 12.17 34.99 3.07
3790 5326 2.092807 TCAAATGCAGGCTAGCTGATGA 60.093 45.455 15.72 10.26 34.99 2.92
3791 5327 1.964552 AATGCAGGCTAGCTGATGAC 58.035 50.000 15.72 8.23 34.99 3.06
3792 5328 1.129917 ATGCAGGCTAGCTGATGACT 58.870 50.000 15.72 0.00 34.99 3.41
3793 5329 1.780503 TGCAGGCTAGCTGATGACTA 58.219 50.000 15.72 0.00 34.99 2.59
3794 5330 2.110578 TGCAGGCTAGCTGATGACTAA 58.889 47.619 15.72 0.00 34.99 2.24
3795 5331 2.102084 TGCAGGCTAGCTGATGACTAAG 59.898 50.000 15.72 0.00 34.99 2.18
3796 5332 2.547642 GCAGGCTAGCTGATGACTAAGG 60.548 54.545 15.72 0.00 0.00 2.69
3797 5333 2.036992 CAGGCTAGCTGATGACTAAGGG 59.963 54.545 15.72 0.00 0.00 3.95
3798 5334 1.270571 GGCTAGCTGATGACTAAGGGC 60.271 57.143 15.72 0.00 0.00 5.19
3799 5335 1.604185 GCTAGCTGATGACTAAGGGCG 60.604 57.143 7.70 0.00 0.00 6.13
3800 5336 1.683917 CTAGCTGATGACTAAGGGCGT 59.316 52.381 0.00 0.00 0.00 5.68
3801 5337 0.176680 AGCTGATGACTAAGGGCGTG 59.823 55.000 0.00 0.00 0.00 5.34
3802 5338 0.108138 GCTGATGACTAAGGGCGTGT 60.108 55.000 0.00 0.00 0.00 4.49
3803 5339 1.676014 GCTGATGACTAAGGGCGTGTT 60.676 52.381 0.00 0.00 0.00 3.32
3804 5340 2.699954 CTGATGACTAAGGGCGTGTTT 58.300 47.619 0.00 0.00 0.00 2.83
3805 5341 2.416547 CTGATGACTAAGGGCGTGTTTG 59.583 50.000 0.00 0.00 0.00 2.93
3806 5342 1.737793 GATGACTAAGGGCGTGTTTGG 59.262 52.381 0.00 0.00 0.00 3.28
3807 5343 0.470766 TGACTAAGGGCGTGTTTGGT 59.529 50.000 0.00 0.00 0.00 3.67
3808 5344 1.134037 TGACTAAGGGCGTGTTTGGTT 60.134 47.619 0.00 0.00 0.00 3.67
3809 5345 1.265905 GACTAAGGGCGTGTTTGGTTG 59.734 52.381 0.00 0.00 0.00 3.77
3810 5346 0.039527 CTAAGGGCGTGTTTGGTTGC 60.040 55.000 0.00 0.00 0.00 4.17
3811 5347 0.466555 TAAGGGCGTGTTTGGTTGCT 60.467 50.000 0.00 0.00 0.00 3.91
3812 5348 1.326951 AAGGGCGTGTTTGGTTGCTT 61.327 50.000 0.00 0.00 0.00 3.91
3813 5349 1.142965 GGGCGTGTTTGGTTGCTTT 59.857 52.632 0.00 0.00 0.00 3.51
3814 5350 0.874175 GGGCGTGTTTGGTTGCTTTC 60.874 55.000 0.00 0.00 0.00 2.62
3815 5351 0.179124 GGCGTGTTTGGTTGCTTTCA 60.179 50.000 0.00 0.00 0.00 2.69
3816 5352 1.537990 GGCGTGTTTGGTTGCTTTCAT 60.538 47.619 0.00 0.00 0.00 2.57
3817 5353 2.200899 GCGTGTTTGGTTGCTTTCATT 58.799 42.857 0.00 0.00 0.00 2.57
3818 5354 2.033832 GCGTGTTTGGTTGCTTTCATTG 60.034 45.455 0.00 0.00 0.00 2.82
3819 5355 2.033832 CGTGTTTGGTTGCTTTCATTGC 60.034 45.455 0.00 0.00 0.00 3.56
3820 5356 3.197265 GTGTTTGGTTGCTTTCATTGCT 58.803 40.909 0.00 0.00 0.00 3.91
3821 5357 3.001533 GTGTTTGGTTGCTTTCATTGCTG 59.998 43.478 0.00 0.00 0.00 4.41
3822 5358 2.529780 TTGGTTGCTTTCATTGCTGG 57.470 45.000 0.00 0.00 0.00 4.85
3823 5359 0.680618 TGGTTGCTTTCATTGCTGGG 59.319 50.000 0.00 0.00 0.00 4.45
3824 5360 0.671472 GGTTGCTTTCATTGCTGGGC 60.671 55.000 0.00 0.00 0.00 5.36
3825 5361 0.671472 GTTGCTTTCATTGCTGGGCC 60.671 55.000 0.00 0.00 0.00 5.80
3826 5362 0.832983 TTGCTTTCATTGCTGGGCCT 60.833 50.000 4.53 0.00 0.00 5.19
3827 5363 1.217244 GCTTTCATTGCTGGGCCTG 59.783 57.895 4.53 5.32 0.00 4.85
3828 5364 1.895238 CTTTCATTGCTGGGCCTGG 59.105 57.895 12.70 2.60 0.00 4.45
3829 5365 2.234913 CTTTCATTGCTGGGCCTGGC 62.235 60.000 11.05 11.05 0.00 4.85
3830 5366 2.735151 TTTCATTGCTGGGCCTGGCT 62.735 55.000 19.68 0.00 0.00 4.75
3831 5367 3.145551 CATTGCTGGGCCTGGCTC 61.146 66.667 19.68 16.49 0.00 4.70
3832 5368 3.664888 ATTGCTGGGCCTGGCTCA 61.665 61.111 22.07 22.07 36.30 4.26
3837 5373 2.686470 TGGGCCTGGCTCAGAGAG 60.686 66.667 19.38 0.00 32.27 3.20
3838 5374 3.478274 GGGCCTGGCTCAGAGAGG 61.478 72.222 19.68 0.74 32.44 3.69
3839 5375 2.364842 GGCCTGGCTCAGAGAGGA 60.365 66.667 19.68 0.00 32.44 3.71
3840 5376 1.992277 GGCCTGGCTCAGAGAGGAA 60.992 63.158 19.68 0.00 32.44 3.36
3841 5377 1.557269 GGCCTGGCTCAGAGAGGAAA 61.557 60.000 19.68 0.00 32.44 3.13
3842 5378 0.326264 GCCTGGCTCAGAGAGGAAAA 59.674 55.000 12.43 0.00 32.44 2.29
3843 5379 1.271597 GCCTGGCTCAGAGAGGAAAAA 60.272 52.381 12.43 0.00 32.44 1.94
3844 5380 2.431454 CCTGGCTCAGAGAGGAAAAAC 58.569 52.381 0.00 0.00 32.44 2.43
3845 5381 2.072298 CTGGCTCAGAGAGGAAAAACG 58.928 52.381 0.00 0.00 32.44 3.60
3846 5382 1.691976 TGGCTCAGAGAGGAAAAACGA 59.308 47.619 0.00 0.00 0.00 3.85
3847 5383 2.289072 TGGCTCAGAGAGGAAAAACGAG 60.289 50.000 0.00 0.00 0.00 4.18
3848 5384 1.729517 GCTCAGAGAGGAAAAACGAGC 59.270 52.381 0.00 0.00 37.81 5.03
3849 5385 2.342179 CTCAGAGAGGAAAAACGAGCC 58.658 52.381 0.00 0.00 0.00 4.70
3850 5386 1.691976 TCAGAGAGGAAAAACGAGCCA 59.308 47.619 0.00 0.00 0.00 4.75
3851 5387 2.072298 CAGAGAGGAAAAACGAGCCAG 58.928 52.381 0.00 0.00 0.00 4.85
3852 5388 1.002544 AGAGAGGAAAAACGAGCCAGG 59.997 52.381 0.00 0.00 0.00 4.45
3853 5389 0.606673 AGAGGAAAAACGAGCCAGGC 60.607 55.000 1.84 1.84 0.00 4.85
3854 5390 0.606673 GAGGAAAAACGAGCCAGGCT 60.607 55.000 16.12 16.12 43.88 4.58
3855 5391 0.890996 AGGAAAAACGAGCCAGGCTG 60.891 55.000 22.26 13.98 39.88 4.85
3856 5392 0.889186 GGAAAAACGAGCCAGGCTGA 60.889 55.000 22.26 0.00 39.88 4.26
3857 5393 0.519077 GAAAAACGAGCCAGGCTGAG 59.481 55.000 22.26 15.51 39.88 3.35
3858 5394 1.518903 AAAAACGAGCCAGGCTGAGC 61.519 55.000 22.26 17.37 39.88 4.26
3859 5395 2.680974 AAAACGAGCCAGGCTGAGCA 62.681 55.000 22.26 0.00 39.88 4.26
3860 5396 3.602513 AACGAGCCAGGCTGAGCAG 62.603 63.158 22.26 19.43 39.88 4.24
3861 5397 4.834453 CGAGCCAGGCTGAGCAGG 62.834 72.222 22.26 8.91 39.88 4.85
3869 5405 4.357279 GCTGAGCAGGCCTTGGGT 62.357 66.667 0.00 0.00 0.00 4.51
3870 5406 2.360852 CTGAGCAGGCCTTGGGTG 60.361 66.667 0.00 0.00 0.00 4.61
3871 5407 2.853542 TGAGCAGGCCTTGGGTGA 60.854 61.111 0.00 0.00 0.00 4.02
3872 5408 2.045536 GAGCAGGCCTTGGGTGAG 60.046 66.667 0.00 0.00 0.00 3.51
3873 5409 3.635268 GAGCAGGCCTTGGGTGAGG 62.635 68.421 0.00 0.00 39.93 3.86
3874 5410 4.748144 GCAGGCCTTGGGTGAGGG 62.748 72.222 0.00 0.00 37.29 4.30
3875 5411 2.935481 CAGGCCTTGGGTGAGGGA 60.935 66.667 0.00 0.00 37.29 4.20
3876 5412 2.121506 AGGCCTTGGGTGAGGGAA 60.122 61.111 0.00 0.00 37.29 3.97
3877 5413 1.778383 AGGCCTTGGGTGAGGGAAA 60.778 57.895 0.00 0.00 37.29 3.13
3878 5414 1.155155 GGCCTTGGGTGAGGGAAAA 59.845 57.895 0.00 0.00 37.29 2.29
3879 5415 1.185618 GGCCTTGGGTGAGGGAAAAC 61.186 60.000 0.00 0.00 37.29 2.43
3880 5416 1.524008 GCCTTGGGTGAGGGAAAACG 61.524 60.000 0.00 0.00 37.29 3.60
3881 5417 0.109723 CCTTGGGTGAGGGAAAACGA 59.890 55.000 0.00 0.00 32.94 3.85
3882 5418 1.523758 CTTGGGTGAGGGAAAACGAG 58.476 55.000 0.00 0.00 0.00 4.18
3883 5419 0.109723 TTGGGTGAGGGAAAACGAGG 59.890 55.000 0.00 0.00 0.00 4.63
3884 5420 1.674651 GGGTGAGGGAAAACGAGGC 60.675 63.158 0.00 0.00 0.00 4.70
3885 5421 1.674651 GGTGAGGGAAAACGAGGCC 60.675 63.158 0.00 0.00 0.00 5.19
3886 5422 1.072505 GTGAGGGAAAACGAGGCCA 59.927 57.895 5.01 0.00 0.00 5.36
3887 5423 0.536460 GTGAGGGAAAACGAGGCCAA 60.536 55.000 5.01 0.00 0.00 4.52
3888 5424 0.183971 TGAGGGAAAACGAGGCCAAA 59.816 50.000 5.01 0.00 0.00 3.28
3889 5425 1.324383 GAGGGAAAACGAGGCCAAAA 58.676 50.000 5.01 0.00 0.00 2.44
3890 5426 1.684450 GAGGGAAAACGAGGCCAAAAA 59.316 47.619 5.01 0.00 0.00 1.94
3891 5427 1.411246 AGGGAAAACGAGGCCAAAAAC 59.589 47.619 5.01 0.00 0.00 2.43
3892 5428 1.483316 GGAAAACGAGGCCAAAAACG 58.517 50.000 5.01 5.11 0.00 3.60
3893 5429 1.202325 GGAAAACGAGGCCAAAAACGT 60.202 47.619 5.01 5.80 40.64 3.99
3894 5430 2.033174 GGAAAACGAGGCCAAAAACGTA 59.967 45.455 5.01 0.00 38.00 3.57
3895 5431 3.294102 GAAAACGAGGCCAAAAACGTAG 58.706 45.455 5.01 0.00 38.00 3.51
3896 5432 2.243602 AACGAGGCCAAAAACGTAGA 57.756 45.000 5.01 0.00 38.00 2.59
3897 5433 2.467566 ACGAGGCCAAAAACGTAGAT 57.532 45.000 5.01 0.00 37.22 1.98
3898 5434 2.073816 ACGAGGCCAAAAACGTAGATG 58.926 47.619 5.01 0.00 37.22 2.90
3899 5435 2.073816 CGAGGCCAAAAACGTAGATGT 58.926 47.619 5.01 0.00 0.00 3.06
3900 5436 2.093783 CGAGGCCAAAAACGTAGATGTC 59.906 50.000 5.01 0.00 0.00 3.06
3901 5437 3.071479 GAGGCCAAAAACGTAGATGTCA 58.929 45.455 5.01 0.00 0.00 3.58
3902 5438 3.482436 AGGCCAAAAACGTAGATGTCAA 58.518 40.909 5.01 0.00 0.00 3.18
3903 5439 3.252458 AGGCCAAAAACGTAGATGTCAAC 59.748 43.478 5.01 0.00 0.00 3.18
3904 5440 3.252458 GGCCAAAAACGTAGATGTCAACT 59.748 43.478 0.00 0.00 0.00 3.16
3905 5441 4.261447 GGCCAAAAACGTAGATGTCAACTT 60.261 41.667 0.00 0.00 0.00 2.66
3906 5442 4.675114 GCCAAAAACGTAGATGTCAACTTG 59.325 41.667 0.00 0.00 0.00 3.16
3907 5443 5.504994 GCCAAAAACGTAGATGTCAACTTGA 60.505 40.000 0.00 0.00 0.00 3.02
3908 5444 6.668323 CCAAAAACGTAGATGTCAACTTGAT 58.332 36.000 0.00 0.00 0.00 2.57
3909 5445 7.138736 CCAAAAACGTAGATGTCAACTTGATT 58.861 34.615 0.00 0.00 0.00 2.57
3910 5446 7.113404 CCAAAAACGTAGATGTCAACTTGATTG 59.887 37.037 0.00 0.00 39.94 2.67
3911 5447 5.862924 AACGTAGATGTCAACTTGATTGG 57.137 39.130 0.00 0.00 38.98 3.16
3912 5448 4.894784 ACGTAGATGTCAACTTGATTGGT 58.105 39.130 0.00 0.00 38.98 3.67
3913 5449 5.305585 ACGTAGATGTCAACTTGATTGGTT 58.694 37.500 0.00 0.00 38.98 3.67
3914 5450 5.179368 ACGTAGATGTCAACTTGATTGGTTG 59.821 40.000 0.00 0.00 43.57 3.77
3915 5451 4.510038 AGATGTCAACTTGATTGGTTGC 57.490 40.909 0.00 0.00 42.40 4.17
3916 5452 3.256631 AGATGTCAACTTGATTGGTTGCC 59.743 43.478 0.00 0.00 42.40 4.52
3917 5453 2.665165 TGTCAACTTGATTGGTTGCCT 58.335 42.857 0.00 0.00 42.40 4.75
3918 5454 2.361757 TGTCAACTTGATTGGTTGCCTG 59.638 45.455 0.00 0.00 42.40 4.85
3919 5455 1.340889 TCAACTTGATTGGTTGCCTGC 59.659 47.619 0.00 0.00 42.40 4.85
3920 5456 1.068895 CAACTTGATTGGTTGCCTGCA 59.931 47.619 0.00 0.00 37.76 4.41
3921 5457 1.636148 ACTTGATTGGTTGCCTGCAT 58.364 45.000 0.00 0.00 0.00 3.96
3922 5458 1.972795 ACTTGATTGGTTGCCTGCATT 59.027 42.857 0.00 0.00 0.00 3.56
3923 5459 3.164268 ACTTGATTGGTTGCCTGCATTA 58.836 40.909 0.00 0.00 0.00 1.90
3924 5460 3.194116 ACTTGATTGGTTGCCTGCATTAG 59.806 43.478 0.00 0.00 0.00 1.73
3925 5461 3.084536 TGATTGGTTGCCTGCATTAGA 57.915 42.857 0.00 0.00 0.00 2.10
3926 5462 3.018856 TGATTGGTTGCCTGCATTAGAG 58.981 45.455 0.00 0.00 0.00 2.43
3927 5463 1.838112 TTGGTTGCCTGCATTAGAGG 58.162 50.000 0.00 0.00 0.00 3.69
3928 5464 0.034186 TGGTTGCCTGCATTAGAGGG 60.034 55.000 0.00 0.00 0.00 4.30
3929 5465 0.034089 GGTTGCCTGCATTAGAGGGT 60.034 55.000 0.00 0.00 0.00 4.34
3930 5466 1.383523 GTTGCCTGCATTAGAGGGTC 58.616 55.000 0.00 0.00 0.00 4.46
3931 5467 1.065126 GTTGCCTGCATTAGAGGGTCT 60.065 52.381 0.00 0.00 0.00 3.85
3932 5468 1.289160 TGCCTGCATTAGAGGGTCTT 58.711 50.000 0.00 0.00 0.00 3.01
3933 5469 1.065199 TGCCTGCATTAGAGGGTCTTG 60.065 52.381 0.00 0.00 0.00 3.02
3934 5470 1.673168 CCTGCATTAGAGGGTCTTGC 58.327 55.000 0.00 0.00 32.40 4.01
3935 5471 1.065199 CCTGCATTAGAGGGTCTTGCA 60.065 52.381 3.85 3.85 37.75 4.08
3936 5472 2.012673 CTGCATTAGAGGGTCTTGCAC 58.987 52.381 0.18 0.00 35.87 4.57
3937 5473 1.630369 TGCATTAGAGGGTCTTGCACT 59.370 47.619 0.18 0.00 35.87 4.40
3938 5474 2.040278 TGCATTAGAGGGTCTTGCACTT 59.960 45.455 0.18 0.00 35.87 3.16
3939 5475 2.421424 GCATTAGAGGGTCTTGCACTTG 59.579 50.000 0.00 0.00 32.14 3.16
3940 5476 2.185004 TTAGAGGGTCTTGCACTTGC 57.815 50.000 0.00 0.00 42.50 4.01
3941 5477 0.037326 TAGAGGGTCTTGCACTTGCG 60.037 55.000 0.00 0.00 45.83 4.85
3942 5478 1.301716 GAGGGTCTTGCACTTGCGA 60.302 57.895 0.00 0.00 45.83 5.10
3943 5479 0.674895 GAGGGTCTTGCACTTGCGAT 60.675 55.000 0.00 0.00 45.83 4.58
3944 5480 0.957395 AGGGTCTTGCACTTGCGATG 60.957 55.000 0.00 0.00 45.83 3.84
3945 5481 1.154150 GGTCTTGCACTTGCGATGC 60.154 57.895 0.00 0.00 45.83 3.91
3955 5491 3.692998 TTGCGATGCAATTTCGACC 57.307 47.368 12.18 0.00 43.99 4.79
3956 5492 0.170116 TTGCGATGCAATTTCGACCC 59.830 50.000 12.18 0.00 43.99 4.46
3957 5493 1.297598 GCGATGCAATTTCGACCCG 60.298 57.895 12.18 0.00 38.88 5.28
3958 5494 1.351707 CGATGCAATTTCGACCCGG 59.648 57.895 1.97 0.00 38.88 5.73
3959 5495 1.064134 GATGCAATTTCGACCCGGC 59.936 57.895 0.00 0.00 0.00 6.13
3960 5496 2.646799 GATGCAATTTCGACCCGGCG 62.647 60.000 0.00 0.00 0.00 6.46
3961 5497 3.428282 GCAATTTCGACCCGGCGT 61.428 61.111 6.01 0.00 0.00 5.68
3962 5498 2.973316 GCAATTTCGACCCGGCGTT 61.973 57.895 6.01 0.00 0.00 4.84
3963 5499 1.577421 CAATTTCGACCCGGCGTTT 59.423 52.632 6.01 0.00 0.00 3.60
3964 5500 0.727793 CAATTTCGACCCGGCGTTTG 60.728 55.000 6.01 0.00 0.00 2.93
3965 5501 1.858372 AATTTCGACCCGGCGTTTGG 61.858 55.000 6.01 2.01 0.00 3.28
3966 5502 3.753806 TTTCGACCCGGCGTTTGGT 62.754 57.895 6.01 6.00 37.64 3.67
3967 5503 3.753806 TTCGACCCGGCGTTTGGTT 62.754 57.895 6.01 0.00 34.20 3.67
3968 5504 4.020378 CGACCCGGCGTTTGGTTG 62.020 66.667 6.01 6.40 34.20 3.77
3969 5505 4.337060 GACCCGGCGTTTGGTTGC 62.337 66.667 6.01 0.00 34.20 4.17
3971 5507 3.679738 CCCGGCGTTTGGTTGCAT 61.680 61.111 6.01 0.00 0.00 3.96
3972 5508 2.336478 CCCGGCGTTTGGTTGCATA 61.336 57.895 6.01 0.00 0.00 3.14
3973 5509 1.154112 CCGGCGTTTGGTTGCATAC 60.154 57.895 6.01 0.00 0.00 2.39
3974 5510 1.511043 CGGCGTTTGGTTGCATACG 60.511 57.895 0.00 0.00 37.09 3.06
3975 5511 1.577421 GGCGTTTGGTTGCATACGT 59.423 52.632 0.00 0.00 36.45 3.57
3976 5512 0.727793 GGCGTTTGGTTGCATACGTG 60.728 55.000 0.00 0.00 36.45 4.49
3994 5530 8.757164 CATACGTGCATATGATTAGGAGTTAA 57.243 34.615 6.97 0.00 34.94 2.01
3995 5531 8.648097 CATACGTGCATATGATTAGGAGTTAAC 58.352 37.037 6.97 0.00 34.94 2.01
3996 5532 6.578944 ACGTGCATATGATTAGGAGTTAACA 58.421 36.000 6.97 0.00 0.00 2.41
3997 5533 7.045416 ACGTGCATATGATTAGGAGTTAACAA 58.955 34.615 6.97 0.00 0.00 2.83
3998 5534 7.011109 ACGTGCATATGATTAGGAGTTAACAAC 59.989 37.037 6.97 0.00 0.00 3.32
3999 5535 7.011016 CGTGCATATGATTAGGAGTTAACAACA 59.989 37.037 6.97 0.00 0.00 3.33
4000 5536 8.673711 GTGCATATGATTAGGAGTTAACAACAA 58.326 33.333 6.97 0.00 0.00 2.83
4001 5537 9.237187 TGCATATGATTAGGAGTTAACAACAAA 57.763 29.630 6.97 0.00 0.00 2.83
4012 5548 8.573885 AGGAGTTAACAACAAAACTTAATAGCC 58.426 33.333 8.61 0.00 36.10 3.93
4013 5549 8.354426 GGAGTTAACAACAAAACTTAATAGCCA 58.646 33.333 8.61 0.00 36.10 4.75
4014 5550 9.908152 GAGTTAACAACAAAACTTAATAGCCAT 57.092 29.630 8.61 0.00 36.10 4.40
4015 5551 9.908152 AGTTAACAACAAAACTTAATAGCCATC 57.092 29.630 8.61 0.00 32.00 3.51
4016 5552 8.846607 GTTAACAACAAAACTTAATAGCCATCG 58.153 33.333 0.00 0.00 0.00 3.84
4017 5553 5.949735 ACAACAAAACTTAATAGCCATCGG 58.050 37.500 0.00 0.00 0.00 4.18
4018 5554 5.105917 ACAACAAAACTTAATAGCCATCGGG 60.106 40.000 0.00 0.00 37.18 5.14
4019 5555 4.595986 ACAAAACTTAATAGCCATCGGGT 58.404 39.130 0.00 0.00 37.19 5.28
4020 5556 5.014202 ACAAAACTTAATAGCCATCGGGTT 58.986 37.500 0.00 0.00 34.28 4.11
4021 5557 5.479027 ACAAAACTTAATAGCCATCGGGTTT 59.521 36.000 0.00 0.00 34.28 3.27
4022 5558 5.576447 AAACTTAATAGCCATCGGGTTTG 57.424 39.130 0.00 0.00 34.28 2.93
4023 5559 3.551846 ACTTAATAGCCATCGGGTTTGG 58.448 45.455 0.00 0.00 34.28 3.28
4028 5564 4.743018 CCATCGGGTTTGGCTTCT 57.257 55.556 0.00 0.00 0.00 2.85
4029 5565 2.482326 CCATCGGGTTTGGCTTCTC 58.518 57.895 0.00 0.00 0.00 2.87
4030 5566 0.322456 CCATCGGGTTTGGCTTCTCA 60.322 55.000 0.00 0.00 0.00 3.27
4031 5567 1.683011 CCATCGGGTTTGGCTTCTCAT 60.683 52.381 0.00 0.00 0.00 2.90
4032 5568 2.094675 CATCGGGTTTGGCTTCTCATT 58.905 47.619 0.00 0.00 0.00 2.57
4033 5569 2.286365 TCGGGTTTGGCTTCTCATTT 57.714 45.000 0.00 0.00 0.00 2.32
4034 5570 2.159382 TCGGGTTTGGCTTCTCATTTC 58.841 47.619 0.00 0.00 0.00 2.17
4035 5571 1.135689 CGGGTTTGGCTTCTCATTTCG 60.136 52.381 0.00 0.00 0.00 3.46
4036 5572 1.886542 GGGTTTGGCTTCTCATTTCGT 59.113 47.619 0.00 0.00 0.00 3.85
4037 5573 2.095212 GGGTTTGGCTTCTCATTTCGTC 60.095 50.000 0.00 0.00 0.00 4.20
4038 5574 2.412847 GGTTTGGCTTCTCATTTCGTCG 60.413 50.000 0.00 0.00 0.00 5.12
4039 5575 2.448926 TTGGCTTCTCATTTCGTCGA 57.551 45.000 0.00 0.00 0.00 4.20
4040 5576 2.448926 TGGCTTCTCATTTCGTCGAA 57.551 45.000 2.90 2.90 0.00 3.71
4041 5577 2.066262 TGGCTTCTCATTTCGTCGAAC 58.934 47.619 7.29 0.00 0.00 3.95
4042 5578 2.066262 GGCTTCTCATTTCGTCGAACA 58.934 47.619 7.29 0.00 0.00 3.18
4043 5579 2.159827 GGCTTCTCATTTCGTCGAACAC 60.160 50.000 7.29 0.00 0.00 3.32
4062 5598 4.314440 TTGAGTGCGCCGGAGCTT 62.314 61.111 30.49 18.79 38.13 3.74
4063 5599 4.742201 TGAGTGCGCCGGAGCTTC 62.742 66.667 30.49 25.42 38.13 3.86
4070 5606 3.780173 GCCGGAGCTTCCTCTGCT 61.780 66.667 5.05 0.00 42.12 4.24
4075 5611 3.614806 AGCTTCCTCTGCTCCTCG 58.385 61.111 0.00 0.00 35.67 4.63
4076 5612 2.202864 GCTTCCTCTGCTCCTCGC 60.203 66.667 0.00 0.00 39.77 5.03
4077 5613 2.103934 CTTCCTCTGCTCCTCGCG 59.896 66.667 0.00 0.00 43.27 5.87
4078 5614 2.676822 TTCCTCTGCTCCTCGCGT 60.677 61.111 5.77 0.00 43.27 6.01
4079 5615 2.606155 CTTCCTCTGCTCCTCGCGTC 62.606 65.000 5.77 0.00 43.27 5.19
4080 5616 4.544689 CCTCTGCTCCTCGCGTCG 62.545 72.222 5.77 0.00 43.27 5.12
4116 5652 4.003788 CGCCACCGTTGACCTCCT 62.004 66.667 0.00 0.00 0.00 3.69
4117 5653 2.047179 GCCACCGTTGACCTCCTC 60.047 66.667 0.00 0.00 0.00 3.71
4118 5654 2.663196 CCACCGTTGACCTCCTCC 59.337 66.667 0.00 0.00 0.00 4.30
4119 5655 2.663196 CACCGTTGACCTCCTCCC 59.337 66.667 0.00 0.00 0.00 4.30
4120 5656 2.995574 ACCGTTGACCTCCTCCCG 60.996 66.667 0.00 0.00 0.00 5.14
4121 5657 4.452733 CCGTTGACCTCCTCCCGC 62.453 72.222 0.00 0.00 0.00 6.13
4122 5658 4.452733 CGTTGACCTCCTCCCGCC 62.453 72.222 0.00 0.00 0.00 6.13
4123 5659 3.003763 GTTGACCTCCTCCCGCCT 61.004 66.667 0.00 0.00 0.00 5.52
4124 5660 2.683933 TTGACCTCCTCCCGCCTC 60.684 66.667 0.00 0.00 0.00 4.70
4125 5661 3.239627 TTGACCTCCTCCCGCCTCT 62.240 63.158 0.00 0.00 0.00 3.69
4126 5662 2.835895 GACCTCCTCCCGCCTCTC 60.836 72.222 0.00 0.00 0.00 3.20
4127 5663 3.351885 ACCTCCTCCCGCCTCTCT 61.352 66.667 0.00 0.00 0.00 3.10
4128 5664 2.042435 CCTCCTCCCGCCTCTCTT 60.042 66.667 0.00 0.00 0.00 2.85
4129 5665 2.131067 CCTCCTCCCGCCTCTCTTC 61.131 68.421 0.00 0.00 0.00 2.87
4130 5666 2.440430 TCCTCCCGCCTCTCTTCG 60.440 66.667 0.00 0.00 0.00 3.79
4131 5667 4.214327 CCTCCCGCCTCTCTTCGC 62.214 72.222 0.00 0.00 0.00 4.70
4132 5668 4.214327 CTCCCGCCTCTCTTCGCC 62.214 72.222 0.00 0.00 0.00 5.54
4135 5671 4.856607 CCGCCTCTCTTCGCCGAC 62.857 72.222 0.00 0.00 0.00 4.79
4136 5672 4.856607 CGCCTCTCTTCGCCGACC 62.857 72.222 0.00 0.00 0.00 4.79
4137 5673 3.453679 GCCTCTCTTCGCCGACCT 61.454 66.667 0.00 0.00 0.00 3.85
4138 5674 2.802106 CCTCTCTTCGCCGACCTC 59.198 66.667 0.00 0.00 0.00 3.85
4139 5675 2.776913 CCTCTCTTCGCCGACCTCC 61.777 68.421 0.00 0.00 0.00 4.30
4140 5676 1.751162 CTCTCTTCGCCGACCTCCT 60.751 63.158 0.00 0.00 0.00 3.69
4141 5677 1.999071 CTCTCTTCGCCGACCTCCTG 61.999 65.000 0.00 0.00 0.00 3.86
4142 5678 3.708220 CTCTTCGCCGACCTCCTGC 62.708 68.421 0.00 0.00 0.00 4.85
4171 5707 4.077188 GCTGACGCCGCTGTGTTC 62.077 66.667 0.00 0.00 34.74 3.18
4172 5708 3.767230 CTGACGCCGCTGTGTTCG 61.767 66.667 0.00 0.00 34.74 3.95
4173 5709 4.273257 TGACGCCGCTGTGTTCGA 62.273 61.111 0.00 0.00 34.74 3.71
4174 5710 3.764049 GACGCCGCTGTGTTCGAC 61.764 66.667 0.00 0.00 34.74 4.20
4178 5714 3.403057 CCGCTGTGTTCGACGGTG 61.403 66.667 1.98 0.00 40.77 4.94
4179 5715 2.657296 CGCTGTGTTCGACGGTGT 60.657 61.111 0.00 0.00 36.78 4.16
4180 5716 2.645510 CGCTGTGTTCGACGGTGTC 61.646 63.158 0.00 0.00 36.78 3.67
4192 5728 4.699522 GGTGTCGTCCTGTGGGCC 62.700 72.222 0.00 0.00 0.00 5.80
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 8.864069 AACAATTTTGAAATACACGATGAACA 57.136 26.923 0.00 0.00 0.00 3.18
65 66 8.963130 TGAACAATTTTGAAATACACGATGAAC 58.037 29.630 0.00 0.00 0.00 3.18
95 96 4.255301 AGTGTCGTGGTTTTAGTTCAACA 58.745 39.130 0.00 0.00 0.00 3.33
119 120 4.986054 TGTACACCCTACATTCCAAAGT 57.014 40.909 0.00 0.00 0.00 2.66
120 121 6.642707 TTTTGTACACCCTACATTCCAAAG 57.357 37.500 0.00 0.00 0.00 2.77
212 1447 8.084684 ACAAGCATTCCTTCTTTTCATTTCTAC 58.915 33.333 0.00 0.00 0.00 2.59
242 1477 9.638239 AATACACGATGCACATTTTTAAAAGAT 57.362 25.926 0.14 0.00 0.00 2.40
347 1582 5.242171 ACGTTTTCCTGGTTTTTATTCGGAT 59.758 36.000 0.00 0.00 0.00 4.18
368 1603 3.096852 TCTCTCTCTCTCTCTCTGACGT 58.903 50.000 0.00 0.00 0.00 4.34
369 1604 3.801114 TCTCTCTCTCTCTCTCTGACG 57.199 52.381 0.00 0.00 0.00 4.35
984 2244 1.224592 CATTGCGCCCTAACTCCCT 59.775 57.895 4.18 0.00 0.00 4.20
1248 2515 3.123621 CACTAATCCAACAGAACACGAGC 59.876 47.826 0.00 0.00 0.00 5.03
1258 2525 1.001974 AGAGCACGCACTAATCCAACA 59.998 47.619 0.00 0.00 0.00 3.33
1285 2554 3.715097 GCAGGAGCAGGCCACTCT 61.715 66.667 21.27 8.25 41.58 3.24
1296 2566 8.706492 TTGATTTTATAATTTGCAAGCAGGAG 57.294 30.769 0.00 0.00 0.00 3.69
1315 2586 7.328737 CCGCGATTACTTAGCTACTATTGATTT 59.671 37.037 8.23 0.00 0.00 2.17
1318 2589 5.471116 TCCGCGATTACTTAGCTACTATTGA 59.529 40.000 8.23 0.00 0.00 2.57
1331 2602 1.134818 TGCATCAGTTCCGCGATTACT 60.135 47.619 8.23 4.61 0.00 2.24
1413 2685 5.547465 TGTTAATACCAGGACAGACAGTTG 58.453 41.667 0.00 0.00 0.00 3.16
1430 2702 5.208463 ACCAACCAAGCGATTTTGTTAAT 57.792 34.783 0.00 0.00 0.00 1.40
1435 2707 3.192422 TCCATACCAACCAAGCGATTTTG 59.808 43.478 0.00 0.00 0.00 2.44
1436 2708 3.426615 TCCATACCAACCAAGCGATTTT 58.573 40.909 0.00 0.00 0.00 1.82
1444 2716 5.636123 ACTTGTACAATCCATACCAACCAA 58.364 37.500 9.13 0.00 0.00 3.67
1536 2809 3.010138 ACAGAAACAGGGGCAAAGCTATA 59.990 43.478 0.00 0.00 0.00 1.31
1537 2810 2.225117 ACAGAAACAGGGGCAAAGCTAT 60.225 45.455 0.00 0.00 0.00 2.97
1718 2995 3.964411 TCGACTGGGAATACTCAGAGAA 58.036 45.455 3.79 0.00 46.69 2.87
1719 2996 3.646736 TCGACTGGGAATACTCAGAGA 57.353 47.619 3.79 0.99 46.69 3.10
1782 3059 8.673711 TGTAAGTGATTGCTAATGGAATGTTAC 58.326 33.333 0.00 0.00 34.34 2.50
1785 3062 7.701539 TTGTAAGTGATTGCTAATGGAATGT 57.298 32.000 0.00 0.00 34.34 2.71
1822 3109 4.959839 ACAACTTTTCCCAACACCTACATT 59.040 37.500 0.00 0.00 0.00 2.71
1824 3111 3.949113 GACAACTTTTCCCAACACCTACA 59.051 43.478 0.00 0.00 0.00 2.74
1896 3183 7.335673 TGTGAATTGTACAGTACATACCCAATG 59.664 37.037 14.34 0.00 38.68 2.82
1913 3200 5.653769 CCCAACCAGATATTCTGTGAATTGT 59.346 40.000 4.00 0.00 42.80 2.71
1914 3201 5.887598 TCCCAACCAGATATTCTGTGAATTG 59.112 40.000 4.00 3.50 42.80 2.32
1915 3202 6.078456 TCCCAACCAGATATTCTGTGAATT 57.922 37.500 4.00 0.00 42.80 2.17
1917 3204 5.512942 TTCCCAACCAGATATTCTGTGAA 57.487 39.130 4.00 0.00 42.80 3.18
1918 3205 5.715439 ATTCCCAACCAGATATTCTGTGA 57.285 39.130 4.00 0.00 42.80 3.58
1919 3206 8.469309 AATAATTCCCAACCAGATATTCTGTG 57.531 34.615 4.00 0.00 42.80 3.66
1958 3249 4.931601 TGACTCATATCTTCACACAAGCAC 59.068 41.667 0.00 0.00 0.00 4.40
1972 3263 0.397941 CCCACGGCCATGACTCATAT 59.602 55.000 0.00 0.00 0.00 1.78
1978 3269 0.893727 AAGAAACCCACGGCCATGAC 60.894 55.000 0.00 0.00 0.00 3.06
1984 3275 3.562639 GTTTCAAGAAACCCACGGC 57.437 52.632 13.34 0.00 43.52 5.68
2142 3434 4.404394 TCCATACAATCAGGAGAAGCGTAA 59.596 41.667 0.00 0.00 0.00 3.18
2145 3437 3.459232 TCCATACAATCAGGAGAAGCG 57.541 47.619 0.00 0.00 0.00 4.68
2364 3748 1.667724 ACGTTATCTGAAGCATGCTGC 59.332 47.619 23.48 21.49 45.46 5.25
2452 3836 3.560636 ACAGCTACAGAACAAACAGGT 57.439 42.857 0.00 0.00 0.00 4.00
2483 3879 5.612725 ACAAACCAGTCCAAAACATGAAT 57.387 34.783 0.00 0.00 0.00 2.57
2492 3888 3.430098 GCACATGAAACAAACCAGTCCAA 60.430 43.478 0.00 0.00 0.00 3.53
2493 3889 2.100584 GCACATGAAACAAACCAGTCCA 59.899 45.455 0.00 0.00 0.00 4.02
2722 4128 1.270358 TGCATGCAAGCAATTGAGCAA 60.270 42.857 20.30 5.96 42.46 3.91
2736 4142 2.677524 TGGGAACAGCCTGCATGC 60.678 61.111 11.82 11.82 36.66 4.06
2922 4442 5.105917 CGTGGGAAACAAATGCTAAGGTATT 60.106 40.000 0.00 0.00 0.00 1.89
2951 4471 6.104665 GCGGGGACAGTAATATATAAAGGAC 58.895 44.000 0.00 0.00 0.00 3.85
3213 4733 2.281484 GACCCACAGCAAGCCGAA 60.281 61.111 0.00 0.00 0.00 4.30
3362 4885 2.936919 TGCTCTGACTCAACACCAAT 57.063 45.000 0.00 0.00 0.00 3.16
3439 4963 0.106894 AGCGGCCTTAATGGAGTAGC 59.893 55.000 0.00 0.00 38.35 3.58
3440 4964 3.746045 TTAGCGGCCTTAATGGAGTAG 57.254 47.619 0.00 0.00 38.35 2.57
3441 4965 3.432608 GGTTTAGCGGCCTTAATGGAGTA 60.433 47.826 0.00 0.00 38.35 2.59
3471 4995 1.419762 TGTGCATGCCTACCCGATTAT 59.580 47.619 16.68 0.00 0.00 1.28
3472 4996 0.833949 TGTGCATGCCTACCCGATTA 59.166 50.000 16.68 0.00 0.00 1.75
3474 4998 1.146930 CTGTGCATGCCTACCCGAT 59.853 57.895 16.68 0.00 0.00 4.18
3475 4999 2.584064 CTGTGCATGCCTACCCGA 59.416 61.111 16.68 0.00 0.00 5.14
3476 5000 2.514592 CCTGTGCATGCCTACCCG 60.515 66.667 16.68 1.70 0.00 5.28
3542 5066 5.690409 GCTGCTACGTTAATAAGCATACTGA 59.310 40.000 10.20 0.00 44.69 3.41
3566 5090 5.124936 AGCGGGGTAAAAACTAAGCTAATTG 59.875 40.000 0.00 0.00 31.38 2.32
3567 5091 5.258841 AGCGGGGTAAAAACTAAGCTAATT 58.741 37.500 0.00 0.00 31.38 1.40
3600 5136 4.014406 GGTCGACAAACTTCCCCAATTAT 58.986 43.478 18.91 0.00 0.00 1.28
3605 5141 1.070105 CGGTCGACAAACTTCCCCA 59.930 57.895 18.91 0.00 0.00 4.96
3615 5151 2.710902 CCATGAGAGGCGGTCGACA 61.711 63.158 18.91 0.00 0.00 4.35
3619 5155 1.000283 CAGATACCATGAGAGGCGGTC 60.000 57.143 0.00 0.00 34.12 4.79
3626 5162 3.309296 GGAGTTCCCAGATACCATGAGA 58.691 50.000 0.00 0.00 34.14 3.27
3640 5176 1.606601 GGGTGCAAAGGGGAGTTCC 60.607 63.158 0.00 0.00 0.00 3.62
3641 5177 1.606601 GGGGTGCAAAGGGGAGTTC 60.607 63.158 0.00 0.00 0.00 3.01
3642 5178 0.774491 TAGGGGTGCAAAGGGGAGTT 60.774 55.000 0.00 0.00 0.00 3.01
3643 5179 1.151677 TAGGGGTGCAAAGGGGAGT 60.152 57.895 0.00 0.00 0.00 3.85
3644 5180 1.609783 CTAGGGGTGCAAAGGGGAG 59.390 63.158 0.00 0.00 0.00 4.30
3645 5181 2.612493 GCTAGGGGTGCAAAGGGGA 61.612 63.158 0.00 0.00 0.00 4.81
3646 5182 2.043953 GCTAGGGGTGCAAAGGGG 60.044 66.667 0.00 0.00 0.00 4.79
3647 5183 1.379044 CAGCTAGGGGTGCAAAGGG 60.379 63.158 0.00 0.00 34.11 3.95
3648 5184 4.326255 CAGCTAGGGGTGCAAAGG 57.674 61.111 0.00 0.00 34.11 3.11
3705 5241 6.785191 TCCTTCATTGATTTTACAATCGAGC 58.215 36.000 0.00 0.00 41.77 5.03
3706 5242 8.454106 AGTTCCTTCATTGATTTTACAATCGAG 58.546 33.333 0.00 0.00 41.77 4.04
3708 5244 8.970691 AAGTTCCTTCATTGATTTTACAATCG 57.029 30.769 0.00 0.00 41.77 3.34
3720 5256 7.279758 GTCTCTGGATAAGAAGTTCCTTCATTG 59.720 40.741 0.00 0.00 42.37 2.82
3728 5264 5.046950 ACCTGTGTCTCTGGATAAGAAGTTC 60.047 44.000 4.97 0.00 38.33 3.01
3729 5265 4.841246 ACCTGTGTCTCTGGATAAGAAGTT 59.159 41.667 4.97 0.00 38.33 2.66
3730 5266 4.221703 CACCTGTGTCTCTGGATAAGAAGT 59.778 45.833 4.97 0.00 38.33 3.01
3732 5268 3.515502 CCACCTGTGTCTCTGGATAAGAA 59.484 47.826 4.97 0.00 38.33 2.52
3733 5269 3.099905 CCACCTGTGTCTCTGGATAAGA 58.900 50.000 4.97 0.00 38.33 2.10
3734 5270 2.419297 GCCACCTGTGTCTCTGGATAAG 60.419 54.545 4.97 0.00 38.33 1.73
3735 5271 1.555075 GCCACCTGTGTCTCTGGATAA 59.445 52.381 4.97 0.00 38.33 1.75
3737 5273 1.557269 GGCCACCTGTGTCTCTGGAT 61.557 60.000 0.00 0.00 38.33 3.41
3781 5317 1.409064 CACGCCCTTAGTCATCAGCTA 59.591 52.381 0.00 0.00 0.00 3.32
3786 5322 1.737793 CCAAACACGCCCTTAGTCATC 59.262 52.381 0.00 0.00 0.00 2.92
3787 5323 1.073284 ACCAAACACGCCCTTAGTCAT 59.927 47.619 0.00 0.00 0.00 3.06
3788 5324 0.470766 ACCAAACACGCCCTTAGTCA 59.529 50.000 0.00 0.00 0.00 3.41
3789 5325 1.265905 CAACCAAACACGCCCTTAGTC 59.734 52.381 0.00 0.00 0.00 2.59
3790 5326 1.314730 CAACCAAACACGCCCTTAGT 58.685 50.000 0.00 0.00 0.00 2.24
3791 5327 0.039527 GCAACCAAACACGCCCTTAG 60.040 55.000 0.00 0.00 0.00 2.18
3792 5328 0.466555 AGCAACCAAACACGCCCTTA 60.467 50.000 0.00 0.00 0.00 2.69
3793 5329 1.326951 AAGCAACCAAACACGCCCTT 61.327 50.000 0.00 0.00 0.00 3.95
3794 5330 1.326951 AAAGCAACCAAACACGCCCT 61.327 50.000 0.00 0.00 0.00 5.19
3795 5331 0.874175 GAAAGCAACCAAACACGCCC 60.874 55.000 0.00 0.00 0.00 6.13
3796 5332 0.179124 TGAAAGCAACCAAACACGCC 60.179 50.000 0.00 0.00 0.00 5.68
3797 5333 1.851658 ATGAAAGCAACCAAACACGC 58.148 45.000 0.00 0.00 0.00 5.34
3798 5334 2.033832 GCAATGAAAGCAACCAAACACG 60.034 45.455 0.00 0.00 0.00 4.49
3799 5335 3.001533 CAGCAATGAAAGCAACCAAACAC 59.998 43.478 0.00 0.00 0.00 3.32
3800 5336 3.196463 CAGCAATGAAAGCAACCAAACA 58.804 40.909 0.00 0.00 0.00 2.83
3801 5337 2.545106 CCAGCAATGAAAGCAACCAAAC 59.455 45.455 0.00 0.00 0.00 2.93
3802 5338 2.485124 CCCAGCAATGAAAGCAACCAAA 60.485 45.455 0.00 0.00 0.00 3.28
3803 5339 1.070445 CCCAGCAATGAAAGCAACCAA 59.930 47.619 0.00 0.00 0.00 3.67
3804 5340 0.680618 CCCAGCAATGAAAGCAACCA 59.319 50.000 0.00 0.00 0.00 3.67
3805 5341 0.671472 GCCCAGCAATGAAAGCAACC 60.671 55.000 0.00 0.00 0.00 3.77
3806 5342 0.671472 GGCCCAGCAATGAAAGCAAC 60.671 55.000 0.00 0.00 0.00 4.17
3807 5343 0.832983 AGGCCCAGCAATGAAAGCAA 60.833 50.000 0.00 0.00 0.00 3.91
3808 5344 1.228956 AGGCCCAGCAATGAAAGCA 60.229 52.632 0.00 0.00 0.00 3.91
3809 5345 1.217244 CAGGCCCAGCAATGAAAGC 59.783 57.895 0.00 0.00 0.00 3.51
3810 5346 1.895238 CCAGGCCCAGCAATGAAAG 59.105 57.895 0.00 0.00 0.00 2.62
3811 5347 2.285024 GCCAGGCCCAGCAATGAAA 61.285 57.895 9.68 0.00 0.00 2.69
3812 5348 2.681064 GCCAGGCCCAGCAATGAA 60.681 61.111 9.68 0.00 0.00 2.57
3813 5349 3.650298 GAGCCAGGCCCAGCAATGA 62.650 63.158 16.39 0.00 0.00 2.57
3814 5350 3.145551 GAGCCAGGCCCAGCAATG 61.146 66.667 16.39 0.00 0.00 2.82
3815 5351 3.657038 CTGAGCCAGGCCCAGCAAT 62.657 63.158 10.51 0.00 0.00 3.56
3816 5352 4.355720 CTGAGCCAGGCCCAGCAA 62.356 66.667 10.51 3.96 0.00 3.91
3818 5354 4.486503 CTCTGAGCCAGGCCCAGC 62.487 72.222 18.21 6.49 31.51 4.85
3819 5355 2.686470 TCTCTGAGCCAGGCCCAG 60.686 66.667 16.97 16.97 31.51 4.45
3820 5356 2.686470 CTCTCTGAGCCAGGCCCA 60.686 66.667 8.22 0.00 31.51 5.36
3821 5357 3.478274 CCTCTCTGAGCCAGGCCC 61.478 72.222 8.22 0.00 31.51 5.80
3822 5358 1.557269 TTTCCTCTCTGAGCCAGGCC 61.557 60.000 8.22 0.00 31.51 5.19
3823 5359 0.326264 TTTTCCTCTCTGAGCCAGGC 59.674 55.000 1.84 1.84 31.51 4.85
3824 5360 2.431454 GTTTTTCCTCTCTGAGCCAGG 58.569 52.381 6.15 6.15 31.51 4.45
3825 5361 2.072298 CGTTTTTCCTCTCTGAGCCAG 58.928 52.381 0.00 0.00 0.00 4.85
3826 5362 1.691976 TCGTTTTTCCTCTCTGAGCCA 59.308 47.619 0.00 0.00 0.00 4.75
3827 5363 2.342179 CTCGTTTTTCCTCTCTGAGCC 58.658 52.381 0.00 0.00 0.00 4.70
3828 5364 1.729517 GCTCGTTTTTCCTCTCTGAGC 59.270 52.381 0.00 0.00 40.31 4.26
3829 5365 2.289072 TGGCTCGTTTTTCCTCTCTGAG 60.289 50.000 0.00 0.00 0.00 3.35
3830 5366 1.691976 TGGCTCGTTTTTCCTCTCTGA 59.308 47.619 0.00 0.00 0.00 3.27
3831 5367 2.072298 CTGGCTCGTTTTTCCTCTCTG 58.928 52.381 0.00 0.00 0.00 3.35
3832 5368 1.002544 CCTGGCTCGTTTTTCCTCTCT 59.997 52.381 0.00 0.00 0.00 3.10
3833 5369 1.443802 CCTGGCTCGTTTTTCCTCTC 58.556 55.000 0.00 0.00 0.00 3.20
3834 5370 0.606673 GCCTGGCTCGTTTTTCCTCT 60.607 55.000 12.43 0.00 0.00 3.69
3835 5371 0.606673 AGCCTGGCTCGTTTTTCCTC 60.607 55.000 17.22 0.00 30.62 3.71
3836 5372 0.890996 CAGCCTGGCTCGTTTTTCCT 60.891 55.000 20.49 0.00 36.40 3.36
3837 5373 0.889186 TCAGCCTGGCTCGTTTTTCC 60.889 55.000 20.49 0.00 36.40 3.13
3838 5374 0.519077 CTCAGCCTGGCTCGTTTTTC 59.481 55.000 20.49 0.00 36.40 2.29
3839 5375 1.518903 GCTCAGCCTGGCTCGTTTTT 61.519 55.000 20.49 0.00 36.40 1.94
3840 5376 1.968540 GCTCAGCCTGGCTCGTTTT 60.969 57.895 20.49 0.00 36.40 2.43
3841 5377 2.359230 GCTCAGCCTGGCTCGTTT 60.359 61.111 20.49 0.00 36.40 3.60
3842 5378 3.602513 CTGCTCAGCCTGGCTCGTT 62.603 63.158 20.49 0.00 36.40 3.85
3843 5379 4.079850 CTGCTCAGCCTGGCTCGT 62.080 66.667 20.49 0.00 36.40 4.18
3844 5380 4.834453 CCTGCTCAGCCTGGCTCG 62.834 72.222 20.49 14.03 36.40 5.03
3852 5388 4.357279 ACCCAAGGCCTGCTCAGC 62.357 66.667 5.69 0.00 0.00 4.26
3853 5389 2.360852 CACCCAAGGCCTGCTCAG 60.361 66.667 5.69 0.00 0.00 3.35
3854 5390 2.853542 TCACCCAAGGCCTGCTCA 60.854 61.111 5.69 0.00 0.00 4.26
3855 5391 2.045536 CTCACCCAAGGCCTGCTC 60.046 66.667 5.69 0.00 0.00 4.26
3856 5392 3.655211 CCTCACCCAAGGCCTGCT 61.655 66.667 5.69 0.00 0.00 4.24
3857 5393 4.748144 CCCTCACCCAAGGCCTGC 62.748 72.222 5.69 0.00 34.88 4.85
3858 5394 2.080336 TTTCCCTCACCCAAGGCCTG 62.080 60.000 5.69 0.00 34.88 4.85
3859 5395 1.368268 TTTTCCCTCACCCAAGGCCT 61.368 55.000 0.00 0.00 34.88 5.19
3860 5396 1.155155 TTTTCCCTCACCCAAGGCC 59.845 57.895 0.00 0.00 34.88 5.19
3861 5397 1.524008 CGTTTTCCCTCACCCAAGGC 61.524 60.000 0.00 0.00 34.88 4.35
3862 5398 0.109723 TCGTTTTCCCTCACCCAAGG 59.890 55.000 0.00 0.00 36.08 3.61
3863 5399 1.523758 CTCGTTTTCCCTCACCCAAG 58.476 55.000 0.00 0.00 0.00 3.61
3864 5400 0.109723 CCTCGTTTTCCCTCACCCAA 59.890 55.000 0.00 0.00 0.00 4.12
3865 5401 1.758592 CCTCGTTTTCCCTCACCCA 59.241 57.895 0.00 0.00 0.00 4.51
3866 5402 1.674651 GCCTCGTTTTCCCTCACCC 60.675 63.158 0.00 0.00 0.00 4.61
3867 5403 1.674651 GGCCTCGTTTTCCCTCACC 60.675 63.158 0.00 0.00 0.00 4.02
3868 5404 0.536460 TTGGCCTCGTTTTCCCTCAC 60.536 55.000 3.32 0.00 0.00 3.51
3869 5405 0.183971 TTTGGCCTCGTTTTCCCTCA 59.816 50.000 3.32 0.00 0.00 3.86
3870 5406 1.324383 TTTTGGCCTCGTTTTCCCTC 58.676 50.000 3.32 0.00 0.00 4.30
3871 5407 1.411246 GTTTTTGGCCTCGTTTTCCCT 59.589 47.619 3.32 0.00 0.00 4.20
3872 5408 1.860676 GTTTTTGGCCTCGTTTTCCC 58.139 50.000 3.32 0.00 0.00 3.97
3873 5409 1.202325 ACGTTTTTGGCCTCGTTTTCC 60.202 47.619 3.32 0.00 32.62 3.13
3874 5410 2.197792 ACGTTTTTGGCCTCGTTTTC 57.802 45.000 3.32 0.00 32.62 2.29
3875 5411 2.944349 TCTACGTTTTTGGCCTCGTTTT 59.056 40.909 3.32 0.00 37.66 2.43
3876 5412 2.563702 TCTACGTTTTTGGCCTCGTTT 58.436 42.857 3.32 0.00 37.66 3.60
3877 5413 2.243602 TCTACGTTTTTGGCCTCGTT 57.756 45.000 3.32 0.00 37.66 3.85
3878 5414 2.073816 CATCTACGTTTTTGGCCTCGT 58.926 47.619 3.32 9.73 39.74 4.18
3879 5415 2.073816 ACATCTACGTTTTTGGCCTCG 58.926 47.619 3.32 3.84 0.00 4.63
3880 5416 3.071479 TGACATCTACGTTTTTGGCCTC 58.929 45.455 3.32 0.00 0.00 4.70
3881 5417 3.134574 TGACATCTACGTTTTTGGCCT 57.865 42.857 3.32 0.00 0.00 5.19
3882 5418 3.252458 AGTTGACATCTACGTTTTTGGCC 59.748 43.478 0.00 0.00 0.00 5.36
3883 5419 4.483476 AGTTGACATCTACGTTTTTGGC 57.517 40.909 0.00 0.00 0.00 4.52
3884 5420 6.055231 TCAAGTTGACATCTACGTTTTTGG 57.945 37.500 0.08 0.00 0.00 3.28
3885 5421 7.113404 CCAATCAAGTTGACATCTACGTTTTTG 59.887 37.037 7.96 4.28 40.37 2.44
3886 5422 7.138736 CCAATCAAGTTGACATCTACGTTTTT 58.861 34.615 7.96 0.00 40.37 1.94
3887 5423 6.262273 ACCAATCAAGTTGACATCTACGTTTT 59.738 34.615 7.96 0.00 40.37 2.43
3888 5424 5.763204 ACCAATCAAGTTGACATCTACGTTT 59.237 36.000 7.96 0.00 40.37 3.60
3889 5425 5.305585 ACCAATCAAGTTGACATCTACGTT 58.694 37.500 7.96 0.00 40.37 3.99
3890 5426 4.894784 ACCAATCAAGTTGACATCTACGT 58.105 39.130 7.96 0.00 40.37 3.57
3891 5427 5.621422 CAACCAATCAAGTTGACATCTACG 58.379 41.667 7.96 0.00 46.03 3.51
3892 5428 5.393962 GCAACCAATCAAGTTGACATCTAC 58.606 41.667 7.96 0.00 46.03 2.59
3893 5429 5.627499 GCAACCAATCAAGTTGACATCTA 57.373 39.130 7.96 0.00 46.03 1.98
3894 5430 4.510038 GCAACCAATCAAGTTGACATCT 57.490 40.909 7.96 0.00 46.03 2.90
3899 5435 1.340889 GCAGGCAACCAATCAAGTTGA 59.659 47.619 8.27 8.27 46.03 3.18
3900 5436 1.068895 TGCAGGCAACCAATCAAGTTG 59.931 47.619 0.00 0.00 45.92 3.16
3901 5437 1.412079 TGCAGGCAACCAATCAAGTT 58.588 45.000 0.00 0.00 37.17 2.66
3902 5438 1.636148 ATGCAGGCAACCAATCAAGT 58.364 45.000 0.00 0.00 37.17 3.16
3903 5439 2.754946 AATGCAGGCAACCAATCAAG 57.245 45.000 0.00 0.00 37.17 3.02
3904 5440 3.429492 TCTAATGCAGGCAACCAATCAA 58.571 40.909 0.00 0.00 37.17 2.57
3905 5441 3.018856 CTCTAATGCAGGCAACCAATCA 58.981 45.455 0.00 0.00 37.17 2.57
3906 5442 2.360165 CCTCTAATGCAGGCAACCAATC 59.640 50.000 0.00 0.00 37.17 2.67
3907 5443 2.381911 CCTCTAATGCAGGCAACCAAT 58.618 47.619 0.00 0.00 37.17 3.16
3908 5444 1.616725 CCCTCTAATGCAGGCAACCAA 60.617 52.381 0.00 0.00 37.17 3.67
3909 5445 0.034186 CCCTCTAATGCAGGCAACCA 60.034 55.000 0.00 0.00 37.17 3.67
3910 5446 0.034089 ACCCTCTAATGCAGGCAACC 60.034 55.000 0.00 0.00 37.17 3.77
3911 5447 1.065126 AGACCCTCTAATGCAGGCAAC 60.065 52.381 0.00 0.00 0.00 4.17
3912 5448 1.289160 AGACCCTCTAATGCAGGCAA 58.711 50.000 0.00 0.00 0.00 4.52
3913 5449 1.065199 CAAGACCCTCTAATGCAGGCA 60.065 52.381 0.00 0.00 0.00 4.75
3914 5450 1.673168 CAAGACCCTCTAATGCAGGC 58.327 55.000 0.00 0.00 0.00 4.85
3915 5451 1.065199 TGCAAGACCCTCTAATGCAGG 60.065 52.381 0.00 0.00 35.87 4.85
3916 5452 2.012673 GTGCAAGACCCTCTAATGCAG 58.987 52.381 0.00 0.00 39.90 4.41
3917 5453 1.630369 AGTGCAAGACCCTCTAATGCA 59.370 47.619 0.00 0.00 37.75 3.96
3918 5454 2.409948 AGTGCAAGACCCTCTAATGC 57.590 50.000 0.00 0.00 32.40 3.56
3919 5455 2.421424 GCAAGTGCAAGACCCTCTAATG 59.579 50.000 0.00 0.00 41.59 1.90
3920 5456 2.716217 GCAAGTGCAAGACCCTCTAAT 58.284 47.619 0.00 0.00 41.59 1.73
3921 5457 1.608025 CGCAAGTGCAAGACCCTCTAA 60.608 52.381 3.87 0.00 42.21 2.10
3922 5458 0.037326 CGCAAGTGCAAGACCCTCTA 60.037 55.000 3.87 0.00 42.21 2.43
3923 5459 1.302033 CGCAAGTGCAAGACCCTCT 60.302 57.895 3.87 0.00 42.21 3.69
3924 5460 0.674895 ATCGCAAGTGCAAGACCCTC 60.675 55.000 3.87 0.00 42.21 4.30
3925 5461 0.957395 CATCGCAAGTGCAAGACCCT 60.957 55.000 3.87 0.00 42.21 4.34
3926 5462 1.503542 CATCGCAAGTGCAAGACCC 59.496 57.895 3.87 0.00 42.21 4.46
3927 5463 1.154150 GCATCGCAAGTGCAAGACC 60.154 57.895 3.87 0.00 42.08 3.85
3928 5464 4.447365 GCATCGCAAGTGCAAGAC 57.553 55.556 3.87 0.00 42.08 3.01
3938 5474 1.800032 GGGTCGAAATTGCATCGCA 59.200 52.632 3.32 0.00 40.04 5.10
3939 5475 1.297598 CGGGTCGAAATTGCATCGC 60.298 57.895 3.32 0.00 40.04 4.58
3940 5476 1.351707 CCGGGTCGAAATTGCATCG 59.648 57.895 1.75 1.75 41.53 3.84
3941 5477 1.064134 GCCGGGTCGAAATTGCATC 59.936 57.895 2.18 0.00 0.00 3.91
3942 5478 2.760159 CGCCGGGTCGAAATTGCAT 61.760 57.895 2.18 0.00 0.00 3.96
3943 5479 3.427425 CGCCGGGTCGAAATTGCA 61.427 61.111 2.18 0.00 0.00 4.08
3944 5480 2.466520 AAACGCCGGGTCGAAATTGC 62.467 55.000 15.84 0.00 0.00 3.56
3945 5481 0.727793 CAAACGCCGGGTCGAAATTG 60.728 55.000 15.84 12.90 0.00 2.32
3946 5482 1.577421 CAAACGCCGGGTCGAAATT 59.423 52.632 15.84 6.66 0.00 1.82
3947 5483 2.329614 CCAAACGCCGGGTCGAAAT 61.330 57.895 15.84 1.73 0.00 2.17
3948 5484 2.973600 CCAAACGCCGGGTCGAAA 60.974 61.111 15.84 0.00 0.00 3.46
3949 5485 3.753806 AACCAAACGCCGGGTCGAA 62.754 57.895 15.84 0.00 36.05 3.71
3950 5486 4.238654 AACCAAACGCCGGGTCGA 62.239 61.111 15.84 0.00 36.05 4.20
3951 5487 4.020378 CAACCAAACGCCGGGTCG 62.020 66.667 2.18 0.61 36.05 4.79
3952 5488 4.337060 GCAACCAAACGCCGGGTC 62.337 66.667 2.18 0.00 36.05 4.46
3954 5490 2.336478 TATGCAACCAAACGCCGGG 61.336 57.895 2.18 0.00 0.00 5.73
3955 5491 1.154112 GTATGCAACCAAACGCCGG 60.154 57.895 0.00 0.00 0.00 6.13
3956 5492 1.511043 CGTATGCAACCAAACGCCG 60.511 57.895 0.00 0.00 0.00 6.46
3957 5493 0.727793 CACGTATGCAACCAAACGCC 60.728 55.000 0.00 0.00 38.87 5.68
3958 5494 2.707192 CACGTATGCAACCAAACGC 58.293 52.632 0.00 0.00 38.87 4.84
3969 5505 8.648097 GTTAACTCCTAATCATATGCACGTATG 58.352 37.037 0.00 3.86 34.16 2.39
3970 5506 8.364894 TGTTAACTCCTAATCATATGCACGTAT 58.635 33.333 7.22 0.00 0.00 3.06
3971 5507 7.718525 TGTTAACTCCTAATCATATGCACGTA 58.281 34.615 7.22 0.00 0.00 3.57
3972 5508 6.578944 TGTTAACTCCTAATCATATGCACGT 58.421 36.000 7.22 0.00 0.00 4.49
3973 5509 7.011016 TGTTGTTAACTCCTAATCATATGCACG 59.989 37.037 7.22 0.00 0.00 5.34
3974 5510 8.208718 TGTTGTTAACTCCTAATCATATGCAC 57.791 34.615 7.22 0.00 0.00 4.57
3975 5511 8.800370 TTGTTGTTAACTCCTAATCATATGCA 57.200 30.769 7.22 0.00 0.00 3.96
3986 5522 8.573885 GGCTATTAAGTTTTGTTGTTAACTCCT 58.426 33.333 7.22 0.00 33.66 3.69
3987 5523 8.354426 TGGCTATTAAGTTTTGTTGTTAACTCC 58.646 33.333 7.22 0.00 33.66 3.85
3988 5524 9.908152 ATGGCTATTAAGTTTTGTTGTTAACTC 57.092 29.630 7.22 1.08 33.66 3.01
3989 5525 9.908152 GATGGCTATTAAGTTTTGTTGTTAACT 57.092 29.630 7.22 0.00 36.20 2.24
3990 5526 8.846607 CGATGGCTATTAAGTTTTGTTGTTAAC 58.153 33.333 0.00 0.00 0.00 2.01
3991 5527 8.024285 CCGATGGCTATTAAGTTTTGTTGTTAA 58.976 33.333 0.00 0.00 0.00 2.01
3992 5528 7.362229 CCCGATGGCTATTAAGTTTTGTTGTTA 60.362 37.037 0.00 0.00 0.00 2.41
3993 5529 6.386654 CCGATGGCTATTAAGTTTTGTTGTT 58.613 36.000 0.00 0.00 0.00 2.83
3994 5530 5.105917 CCCGATGGCTATTAAGTTTTGTTGT 60.106 40.000 0.00 0.00 0.00 3.32
3995 5531 5.105917 ACCCGATGGCTATTAAGTTTTGTTG 60.106 40.000 0.00 0.00 33.59 3.33
3996 5532 5.014202 ACCCGATGGCTATTAAGTTTTGTT 58.986 37.500 0.00 0.00 33.59 2.83
3997 5533 4.595986 ACCCGATGGCTATTAAGTTTTGT 58.404 39.130 0.00 0.00 33.59 2.83
3998 5534 5.576447 AACCCGATGGCTATTAAGTTTTG 57.424 39.130 0.00 0.00 33.59 2.44
3999 5535 5.105513 CCAAACCCGATGGCTATTAAGTTTT 60.106 40.000 3.58 0.00 33.59 2.43
4000 5536 4.401202 CCAAACCCGATGGCTATTAAGTTT 59.599 41.667 0.00 0.00 33.59 2.66
4001 5537 3.951680 CCAAACCCGATGGCTATTAAGTT 59.048 43.478 0.00 0.00 33.59 2.66
4002 5538 3.551846 CCAAACCCGATGGCTATTAAGT 58.448 45.455 0.00 0.00 33.59 2.24
4011 5547 0.322456 TGAGAAGCCAAACCCGATGG 60.322 55.000 0.00 0.00 41.08 3.51
4012 5548 1.755179 ATGAGAAGCCAAACCCGATG 58.245 50.000 0.00 0.00 0.00 3.84
4013 5549 2.514458 AATGAGAAGCCAAACCCGAT 57.486 45.000 0.00 0.00 0.00 4.18
4014 5550 2.159382 GAAATGAGAAGCCAAACCCGA 58.841 47.619 0.00 0.00 0.00 5.14
4015 5551 1.135689 CGAAATGAGAAGCCAAACCCG 60.136 52.381 0.00 0.00 0.00 5.28
4016 5552 1.886542 ACGAAATGAGAAGCCAAACCC 59.113 47.619 0.00 0.00 0.00 4.11
4017 5553 2.412847 CGACGAAATGAGAAGCCAAACC 60.413 50.000 0.00 0.00 0.00 3.27
4018 5554 2.478894 TCGACGAAATGAGAAGCCAAAC 59.521 45.455 0.00 0.00 0.00 2.93
4019 5555 2.761559 TCGACGAAATGAGAAGCCAAA 58.238 42.857 0.00 0.00 0.00 3.28
4020 5556 2.448926 TCGACGAAATGAGAAGCCAA 57.551 45.000 0.00 0.00 0.00 4.52
4021 5557 2.066262 GTTCGACGAAATGAGAAGCCA 58.934 47.619 12.67 0.00 0.00 4.75
4022 5558 2.066262 TGTTCGACGAAATGAGAAGCC 58.934 47.619 12.67 0.00 0.00 4.35
4023 5559 3.091653 GTGTTCGACGAAATGAGAAGC 57.908 47.619 12.67 0.00 0.00 3.86
4035 5571 1.198397 CGCACTCAACGTGTTCGAC 59.802 57.895 0.00 0.00 45.57 4.20
4036 5572 2.582265 GCGCACTCAACGTGTTCGA 61.582 57.895 0.30 0.00 45.57 3.71
4037 5573 2.128128 GCGCACTCAACGTGTTCG 60.128 61.111 0.30 0.00 45.57 3.95
4038 5574 2.248431 GGCGCACTCAACGTGTTC 59.752 61.111 10.83 0.00 45.57 3.18
4039 5575 3.636043 CGGCGCACTCAACGTGTT 61.636 61.111 10.83 0.00 45.57 3.32
4045 5581 4.314440 AAGCTCCGGCGCACTCAA 62.314 61.111 20.31 0.00 44.37 3.02
4046 5582 4.742201 GAAGCTCCGGCGCACTCA 62.742 66.667 20.31 0.00 44.37 3.41
4053 5589 3.780173 AGCAGAGGAAGCTCCGGC 61.780 66.667 0.00 0.00 42.75 6.13
4058 5594 3.614806 CGAGGAGCAGAGGAAGCT 58.385 61.111 0.00 0.00 46.82 3.74
4099 5635 3.934391 GAGGAGGTCAACGGTGGCG 62.934 68.421 0.00 0.00 0.00 5.69
4100 5636 2.047179 GAGGAGGTCAACGGTGGC 60.047 66.667 0.00 0.00 0.00 5.01
4101 5637 2.663196 GGAGGAGGTCAACGGTGG 59.337 66.667 0.00 0.00 0.00 4.61
4102 5638 2.663196 GGGAGGAGGTCAACGGTG 59.337 66.667 0.00 0.00 0.00 4.94
4103 5639 2.995574 CGGGAGGAGGTCAACGGT 60.996 66.667 0.00 0.00 0.00 4.83
4104 5640 4.452733 GCGGGAGGAGGTCAACGG 62.453 72.222 0.00 0.00 0.00 4.44
4105 5641 4.452733 GGCGGGAGGAGGTCAACG 62.453 72.222 0.00 0.00 0.00 4.10
4106 5642 3.003763 AGGCGGGAGGAGGTCAAC 61.004 66.667 0.00 0.00 0.00 3.18
4107 5643 2.683933 GAGGCGGGAGGAGGTCAA 60.684 66.667 0.00 0.00 0.00 3.18
4108 5644 3.663815 GAGAGGCGGGAGGAGGTCA 62.664 68.421 0.00 0.00 0.00 4.02
4109 5645 2.835895 GAGAGGCGGGAGGAGGTC 60.836 72.222 0.00 0.00 0.00 3.85
4110 5646 2.864770 GAAGAGAGGCGGGAGGAGGT 62.865 65.000 0.00 0.00 0.00 3.85
4111 5647 2.042435 AAGAGAGGCGGGAGGAGG 60.042 66.667 0.00 0.00 0.00 4.30
4112 5648 2.485795 CGAAGAGAGGCGGGAGGAG 61.486 68.421 0.00 0.00 0.00 3.69
4113 5649 2.440430 CGAAGAGAGGCGGGAGGA 60.440 66.667 0.00 0.00 0.00 3.71
4114 5650 4.214327 GCGAAGAGAGGCGGGAGG 62.214 72.222 0.00 0.00 0.00 4.30
4115 5651 4.214327 GGCGAAGAGAGGCGGGAG 62.214 72.222 0.00 0.00 0.00 4.30
4120 5656 3.418744 GAGGTCGGCGAAGAGAGGC 62.419 68.421 12.92 0.00 0.00 4.70
4121 5657 2.776913 GGAGGTCGGCGAAGAGAGG 61.777 68.421 12.92 0.00 0.00 3.69
4122 5658 1.751162 AGGAGGTCGGCGAAGAGAG 60.751 63.158 12.92 0.00 0.00 3.20
4123 5659 2.046864 CAGGAGGTCGGCGAAGAGA 61.047 63.158 12.92 0.00 0.00 3.10
4124 5660 2.492090 CAGGAGGTCGGCGAAGAG 59.508 66.667 12.92 0.00 0.00 2.85
4125 5661 3.760035 GCAGGAGGTCGGCGAAGA 61.760 66.667 12.92 0.00 0.00 2.87
4154 5690 4.077188 GAACACAGCGGCGTCAGC 62.077 66.667 9.37 0.00 44.18 4.26
4155 5691 3.767230 CGAACACAGCGGCGTCAG 61.767 66.667 9.37 0.78 0.00 3.51
4156 5692 4.273257 TCGAACACAGCGGCGTCA 62.273 61.111 9.37 0.00 0.00 4.35
4157 5693 3.764049 GTCGAACACAGCGGCGTC 61.764 66.667 9.37 0.13 0.00 5.19
4162 5698 2.645510 GACACCGTCGAACACAGCG 61.646 63.158 0.00 0.00 0.00 5.18
4163 5699 3.231501 GACACCGTCGAACACAGC 58.768 61.111 0.00 0.00 0.00 4.40
4175 5711 4.699522 GGCCCACAGGACGACACC 62.700 72.222 0.00 0.00 33.47 4.16
4211 5747 3.991051 ATACCGCGGGATGCCGAG 61.991 66.667 31.38 26.56 42.08 4.63
4212 5748 4.293648 CATACCGCGGGATGCCGA 62.294 66.667 36.12 8.79 42.08 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.