Multiple sequence alignment - TraesCS5D01G488100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G488100 chr5D 100.000 2547 0 0 1 2547 523016914 523014368 0.000000e+00 4704
1 TraesCS5D01G488100 chr5D 96.949 2065 51 3 1 2053 503245283 503247347 0.000000e+00 3454
2 TraesCS5D01G488100 chr5D 96.949 2065 51 3 1 2053 503264765 503262701 0.000000e+00 3454
3 TraesCS5D01G488100 chr5D 95.353 2066 69 8 1 2053 329137667 329139718 0.000000e+00 3258
4 TraesCS5D01G488100 chr5D 95.709 1748 56 7 1 1735 432435266 432437007 0.000000e+00 2795
5 TraesCS5D01G488100 chr5D 95.314 1067 35 4 1 1052 329136577 329135511 0.000000e+00 1679
6 TraesCS5D01G488100 chr5D 97.818 275 6 0 2273 2547 503238182 503238456 2.290000e-130 475
7 TraesCS5D01G488100 chr5D 97.455 275 7 0 2273 2547 503228404 503228678 1.070000e-128 470
8 TraesCS5D01G488100 chr5D 91.450 269 12 2 1 258 436552716 436552984 2.410000e-95 359
9 TraesCS5D01G488100 chr5D 96.875 96 1 2 2131 2224 6203543 6203448 2.620000e-35 159
10 TraesCS5D01G488100 chr5D 95.960 99 2 2 2128 2224 240135436 240135534 2.620000e-35 159
11 TraesCS5D01G488100 chr5D 96.809 94 3 0 2131 2224 449151420 449151327 9.430000e-35 158
12 TraesCS5D01G488100 chr6D 97.046 2065 49 3 1 2053 389245811 389243747 0.000000e+00 3465
13 TraesCS5D01G488100 chr6D 97.818 275 6 0 2273 2547 389254325 389254599 2.290000e-130 475
14 TraesCS5D01G488100 chr3D 97.046 2065 49 3 1 2053 589263515 589261451 0.000000e+00 3465
15 TraesCS5D01G488100 chr3D 95.960 99 2 2 2128 2224 21901820 21901918 2.620000e-35 159
16 TraesCS5D01G488100 chr3D 95.918 98 3 1 2128 2224 21902357 21902454 9.430000e-35 158
17 TraesCS5D01G488100 chr3A 97.046 2065 49 3 1 2053 66005122 66003058 0.000000e+00 3465
18 TraesCS5D01G488100 chr3A 96.271 2065 64 5 1 2053 672888888 672886825 0.000000e+00 3374
19 TraesCS5D01G488100 chr3A 97.818 275 6 0 2273 2547 593311844 593312118 2.290000e-130 475
20 TraesCS5D01G488100 chr3A 98.162 272 5 0 2274 2545 672900364 672900093 2.290000e-130 475
21 TraesCS5D01G488100 chr2D 96.998 2065 50 3 1 2053 591984620 591986684 0.000000e+00 3459
22 TraesCS5D01G488100 chr2D 96.875 96 1 2 2131 2224 585429516 585429421 2.620000e-35 159
23 TraesCS5D01G488100 chr2A 96.949 2065 51 3 1 2053 726906444 726904380 0.000000e+00 3454
24 TraesCS5D01G488100 chr7B 96.610 2065 58 3 1 2053 663099414 663097350 0.000000e+00 3415
25 TraesCS5D01G488100 chr1D 96.739 1901 50 3 165 2053 459904542 459902642 0.000000e+00 3157
26 TraesCS5D01G488100 chr1D 97.455 275 7 0 2273 2547 51917101 51916827 1.070000e-128 470
27 TraesCS5D01G488100 chr1D 92.945 326 12 2 1 315 51914276 51913951 4.960000e-127 464
28 TraesCS5D01G488100 chr1D 96.907 97 3 0 2128 2224 254495741 254495837 2.030000e-36 163
29 TraesCS5D01G488100 chr1D 96.875 96 1 2 2131 2224 483916869 483916774 2.620000e-35 159
30 TraesCS5D01G488100 chrUn 94.344 389 11 2 1 378 470004435 470004823 1.020000e-163 586
31 TraesCS5D01G488100 chrUn 97.818 275 6 0 2273 2547 440226708 440226434 2.290000e-130 475
32 TraesCS5D01G488100 chr7D 97.818 275 6 0 2273 2547 231566520 231566246 2.290000e-130 475
33 TraesCS5D01G488100 chr7D 95.960 99 2 2 2128 2224 231552486 231552584 2.620000e-35 159
34 TraesCS5D01G488100 chr7A 97.818 275 6 0 2273 2547 379930391 379930117 2.290000e-130 475


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G488100 chr5D 523014368 523016914 2546 True 4704 4704 100.000 1 2547 1 chr5D.!!$R5 2546
1 TraesCS5D01G488100 chr5D 503245283 503247347 2064 False 3454 3454 96.949 1 2053 1 chr5D.!!$F7 2052
2 TraesCS5D01G488100 chr5D 503262701 503264765 2064 True 3454 3454 96.949 1 2053 1 chr5D.!!$R4 2052
3 TraesCS5D01G488100 chr5D 329137667 329139718 2051 False 3258 3258 95.353 1 2053 1 chr5D.!!$F2 2052
4 TraesCS5D01G488100 chr5D 432435266 432437007 1741 False 2795 2795 95.709 1 1735 1 chr5D.!!$F3 1734
5 TraesCS5D01G488100 chr5D 329135511 329136577 1066 True 1679 1679 95.314 1 1052 1 chr5D.!!$R2 1051
6 TraesCS5D01G488100 chr6D 389243747 389245811 2064 True 3465 3465 97.046 1 2053 1 chr6D.!!$R1 2052
7 TraesCS5D01G488100 chr3D 589261451 589263515 2064 True 3465 3465 97.046 1 2053 1 chr3D.!!$R1 2052
8 TraesCS5D01G488100 chr3A 66003058 66005122 2064 True 3465 3465 97.046 1 2053 1 chr3A.!!$R1 2052
9 TraesCS5D01G488100 chr3A 672886825 672888888 2063 True 3374 3374 96.271 1 2053 1 chr3A.!!$R2 2052
10 TraesCS5D01G488100 chr2D 591984620 591986684 2064 False 3459 3459 96.998 1 2053 1 chr2D.!!$F1 2052
11 TraesCS5D01G488100 chr2A 726904380 726906444 2064 True 3454 3454 96.949 1 2053 1 chr2A.!!$R1 2052
12 TraesCS5D01G488100 chr7B 663097350 663099414 2064 True 3415 3415 96.610 1 2053 1 chr7B.!!$R1 2052
13 TraesCS5D01G488100 chr1D 459902642 459904542 1900 True 3157 3157 96.739 165 2053 1 chr1D.!!$R1 1888
14 TraesCS5D01G488100 chr1D 51913951 51917101 3150 True 467 470 95.200 1 2547 2 chr1D.!!$R3 2546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
553 3394 0.331616 GGTAGGATGGGCAGTTGGTT 59.668 55.0 0.0 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2360 5205 0.036875 AAGGGGCGAGAAACTCAAGG 59.963 55.0 0.0 0.0 0.0 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
143 2969 1.369625 CGCAGTACAATGGGGAGTTC 58.630 55.000 0.00 0.00 0.00 3.01
152 2978 1.216064 ATGGGGAGTTCTATGCTGCA 58.784 50.000 4.13 4.13 0.00 4.41
156 2982 2.421952 GGGGAGTTCTATGCTGCATTCA 60.422 50.000 21.56 4.74 0.00 2.57
202 3028 2.028567 GGAGCCTATTGATTCTCTCCCG 60.029 54.545 0.00 0.00 35.32 5.14
204 3030 3.309296 AGCCTATTGATTCTCTCCCGAA 58.691 45.455 0.00 0.00 0.00 4.30
205 3031 3.711704 AGCCTATTGATTCTCTCCCGAAA 59.288 43.478 0.00 0.00 0.00 3.46
400 3241 4.822685 TTACGGGTTGGCTGTCTAATTA 57.177 40.909 0.00 0.00 0.00 1.40
407 3248 4.385310 GGTTGGCTGTCTAATTATCCAGGT 60.385 45.833 11.42 0.00 0.00 4.00
439 3280 3.836562 AGTATCTTGTACCTGAACCGGTT 59.163 43.478 22.50 22.50 38.49 4.44
454 3295 3.751518 ACCGGTTGCTCACTTTTTCTAT 58.248 40.909 0.00 0.00 0.00 1.98
521 3362 2.887152 AGACAAAAAGATGGGCTGTCAC 59.113 45.455 3.61 0.00 39.08 3.67
553 3394 0.331616 GGTAGGATGGGCAGTTGGTT 59.668 55.000 0.00 0.00 0.00 3.67
618 3459 2.491825 GCTCTCCTAGGCTTCCCTCATA 60.492 54.545 2.96 0.00 41.75 2.15
712 3553 4.009675 TGAGCGAAATGTAGCAAAAGGAT 58.990 39.130 0.00 0.00 35.48 3.24
887 3729 0.744771 GTCGGAGAAGGGCAATCACC 60.745 60.000 0.00 0.00 39.69 4.02
1048 3890 9.927668 TTTGTTTTGAGATTTTGAGAAGAGTTT 57.072 25.926 0.00 0.00 0.00 2.66
1264 4106 4.124238 CCATATTTTGCCAATTCAGCAGG 58.876 43.478 0.35 0.00 42.17 4.85
1287 4129 6.703607 AGGTCGATCTATGATTTCACATTCAC 59.296 38.462 0.00 0.00 0.00 3.18
1341 4183 3.584848 ACCTTAGGATGGCATAGCCTTAG 59.415 47.826 12.47 12.26 44.62 2.18
1509 4353 1.005097 ACTGCCTGCTGAATCCATGAA 59.995 47.619 0.00 0.00 0.00 2.57
1510 4354 1.676529 CTGCCTGCTGAATCCATGAAG 59.323 52.381 0.00 0.00 0.00 3.02
1551 4395 4.865365 GCGAACTGAAACATCTTAGTAGCT 59.135 41.667 0.00 0.00 0.00 3.32
1558 4402 7.284489 ACTGAAACATCTTAGTAGCTAGAGGAG 59.716 40.741 3.04 0.00 0.00 3.69
1637 4481 1.152631 AAAACGGGGTTGTGGGAGG 60.153 57.895 0.00 0.00 0.00 4.30
1884 4729 5.697633 GGTAGTGAAATAGAACGTGAAACCA 59.302 40.000 0.00 0.00 0.00 3.67
2041 4886 0.957395 AGGGCGATTGTCACTGCTTG 60.957 55.000 0.00 0.00 0.00 4.01
2053 4898 2.280524 TGCTTGTGGACCCGAACG 60.281 61.111 0.00 0.00 0.00 3.95
2054 4899 3.047877 GCTTGTGGACCCGAACGG 61.048 66.667 6.25 6.25 37.81 4.44
2065 4910 3.236604 CCGAACGGGGAGCTTAAAA 57.763 52.632 5.25 0.00 0.00 1.52
2066 4911 1.084289 CCGAACGGGGAGCTTAAAAG 58.916 55.000 5.25 0.00 0.00 2.27
2067 4912 1.084289 CGAACGGGGAGCTTAAAAGG 58.916 55.000 0.00 0.00 0.00 3.11
2068 4913 1.338389 CGAACGGGGAGCTTAAAAGGA 60.338 52.381 0.00 0.00 0.00 3.36
2069 4914 2.786777 GAACGGGGAGCTTAAAAGGAA 58.213 47.619 0.00 0.00 0.00 3.36
2070 4915 3.353557 GAACGGGGAGCTTAAAAGGAAT 58.646 45.455 0.00 0.00 0.00 3.01
2071 4916 2.723273 ACGGGGAGCTTAAAAGGAATG 58.277 47.619 0.00 0.00 0.00 2.67
2072 4917 2.307686 ACGGGGAGCTTAAAAGGAATGA 59.692 45.455 0.00 0.00 0.00 2.57
2073 4918 3.245122 ACGGGGAGCTTAAAAGGAATGAA 60.245 43.478 0.00 0.00 0.00 2.57
2074 4919 3.954258 CGGGGAGCTTAAAAGGAATGAAT 59.046 43.478 0.00 0.00 0.00 2.57
2075 4920 4.202050 CGGGGAGCTTAAAAGGAATGAATG 60.202 45.833 0.00 0.00 0.00 2.67
2076 4921 4.100035 GGGGAGCTTAAAAGGAATGAATGG 59.900 45.833 0.00 0.00 0.00 3.16
2077 4922 4.442052 GGGAGCTTAAAAGGAATGAATGGC 60.442 45.833 0.00 0.00 0.00 4.40
2078 4923 4.403752 GGAGCTTAAAAGGAATGAATGGCT 59.596 41.667 0.00 0.00 0.00 4.75
2079 4924 5.451103 GGAGCTTAAAAGGAATGAATGGCTC 60.451 44.000 0.00 0.00 40.83 4.70
2080 4925 4.403752 AGCTTAAAAGGAATGAATGGCTCC 59.596 41.667 0.00 0.00 0.00 4.70
2081 4926 4.403752 GCTTAAAAGGAATGAATGGCTCCT 59.596 41.667 0.00 0.00 41.51 3.69
2082 4927 5.594317 GCTTAAAAGGAATGAATGGCTCCTA 59.406 40.000 0.00 0.00 38.69 2.94
2083 4928 6.266330 GCTTAAAAGGAATGAATGGCTCCTAT 59.734 38.462 0.00 0.00 38.69 2.57
2084 4929 7.587037 TTAAAAGGAATGAATGGCTCCTATG 57.413 36.000 0.00 0.00 38.69 2.23
2085 4930 4.803329 AAGGAATGAATGGCTCCTATGT 57.197 40.909 0.00 0.00 38.69 2.29
2086 4931 4.803329 AGGAATGAATGGCTCCTATGTT 57.197 40.909 0.00 0.00 37.83 2.71
2087 4932 5.134725 AGGAATGAATGGCTCCTATGTTT 57.865 39.130 0.00 0.00 37.83 2.83
2088 4933 6.266131 AGGAATGAATGGCTCCTATGTTTA 57.734 37.500 0.00 0.00 37.83 2.01
2089 4934 6.856757 AGGAATGAATGGCTCCTATGTTTAT 58.143 36.000 0.00 0.00 37.83 1.40
2090 4935 6.944862 AGGAATGAATGGCTCCTATGTTTATC 59.055 38.462 0.00 0.00 37.83 1.75
2091 4936 6.128172 GGAATGAATGGCTCCTATGTTTATCG 60.128 42.308 0.00 0.00 0.00 2.92
2092 4937 5.545063 TGAATGGCTCCTATGTTTATCGA 57.455 39.130 0.00 0.00 0.00 3.59
2093 4938 5.924356 TGAATGGCTCCTATGTTTATCGAA 58.076 37.500 0.00 0.00 0.00 3.71
2094 4939 5.758296 TGAATGGCTCCTATGTTTATCGAAC 59.242 40.000 0.00 0.00 38.78 3.95
2106 4951 6.603237 TGTTTATCGAACATCCTGCTTATG 57.397 37.500 0.00 0.00 43.13 1.90
2107 4952 5.527214 TGTTTATCGAACATCCTGCTTATGG 59.473 40.000 0.00 0.00 43.13 2.74
2108 4953 5.545063 TTATCGAACATCCTGCTTATGGA 57.455 39.130 0.00 0.00 38.06 3.41
2109 4954 3.179443 TCGAACATCCTGCTTATGGAC 57.821 47.619 0.00 0.00 36.30 4.02
2110 4955 2.766263 TCGAACATCCTGCTTATGGACT 59.234 45.455 0.00 0.00 36.30 3.85
2111 4956 3.126831 CGAACATCCTGCTTATGGACTC 58.873 50.000 0.00 0.00 36.30 3.36
2112 4957 2.898729 ACATCCTGCTTATGGACTCG 57.101 50.000 0.00 0.00 36.30 4.18
2113 4958 2.388735 ACATCCTGCTTATGGACTCGA 58.611 47.619 0.00 0.00 36.30 4.04
2114 4959 2.766263 ACATCCTGCTTATGGACTCGAA 59.234 45.455 0.00 0.00 36.30 3.71
2115 4960 2.961526 TCCTGCTTATGGACTCGAAC 57.038 50.000 0.00 0.00 0.00 3.95
2116 4961 1.134367 TCCTGCTTATGGACTCGAACG 59.866 52.381 0.00 0.00 0.00 3.95
2117 4962 1.560923 CTGCTTATGGACTCGAACGG 58.439 55.000 0.00 0.00 0.00 4.44
2118 4963 0.174845 TGCTTATGGACTCGAACGGG 59.825 55.000 0.00 0.00 0.00 5.28
2119 4964 0.529992 GCTTATGGACTCGAACGGGG 60.530 60.000 0.00 0.00 0.00 5.73
2120 4965 1.108776 CTTATGGACTCGAACGGGGA 58.891 55.000 0.00 0.00 0.00 4.81
2121 4966 1.067212 CTTATGGACTCGAACGGGGAG 59.933 57.143 0.00 0.00 37.54 4.30
2122 4967 1.389609 TATGGACTCGAACGGGGAGC 61.390 60.000 0.00 0.00 34.87 4.70
2123 4968 3.069318 GGACTCGAACGGGGAGCT 61.069 66.667 0.00 0.00 34.87 4.09
2124 4969 2.647158 GGACTCGAACGGGGAGCTT 61.647 63.158 0.00 0.00 34.87 3.74
2125 4970 1.318158 GGACTCGAACGGGGAGCTTA 61.318 60.000 0.00 0.00 34.87 3.09
2126 4971 0.529378 GACTCGAACGGGGAGCTTAA 59.471 55.000 0.00 0.00 34.87 1.85
2127 4972 0.971386 ACTCGAACGGGGAGCTTAAA 59.029 50.000 0.00 0.00 34.87 1.52
2128 4973 1.553704 ACTCGAACGGGGAGCTTAAAT 59.446 47.619 0.00 0.00 34.87 1.40
2129 4974 2.202566 CTCGAACGGGGAGCTTAAATC 58.797 52.381 0.00 0.00 0.00 2.17
2130 4975 1.134610 TCGAACGGGGAGCTTAAATCC 60.135 52.381 0.00 0.00 35.99 3.01
2131 4976 1.406341 CGAACGGGGAGCTTAAATCCA 60.406 52.381 8.29 0.00 38.70 3.41
2132 4977 2.745152 CGAACGGGGAGCTTAAATCCAT 60.745 50.000 8.29 0.00 38.70 3.41
2133 4978 3.288092 GAACGGGGAGCTTAAATCCATT 58.712 45.455 8.29 0.94 38.70 3.16
2134 4979 4.457466 GAACGGGGAGCTTAAATCCATTA 58.543 43.478 8.29 0.00 38.70 1.90
2135 4980 4.086706 ACGGGGAGCTTAAATCCATTAG 57.913 45.455 8.29 0.67 38.70 1.73
2136 4981 3.458487 ACGGGGAGCTTAAATCCATTAGT 59.542 43.478 8.29 1.15 38.70 2.24
2137 4982 4.657039 ACGGGGAGCTTAAATCCATTAGTA 59.343 41.667 8.29 0.00 38.70 1.82
2138 4983 4.995487 CGGGGAGCTTAAATCCATTAGTAC 59.005 45.833 8.29 0.00 38.70 2.73
2139 4984 5.221661 CGGGGAGCTTAAATCCATTAGTACT 60.222 44.000 0.00 0.00 38.70 2.73
2140 4985 6.014840 CGGGGAGCTTAAATCCATTAGTACTA 60.015 42.308 0.00 0.00 38.70 1.82
2141 4986 7.472381 CGGGGAGCTTAAATCCATTAGTACTAA 60.472 40.741 17.41 17.41 38.70 2.24
2142 4987 8.383947 GGGGAGCTTAAATCCATTAGTACTAAT 58.616 37.037 20.27 20.27 38.70 1.73
2143 4988 9.438228 GGGAGCTTAAATCCATTAGTACTAATC 57.562 37.037 22.60 10.19 38.70 1.75
2144 4989 9.998106 GGAGCTTAAATCCATTAGTACTAATCA 57.002 33.333 22.60 13.89 36.79 2.57
2189 5034 9.897744 TTATTTGTTTGAAGTCATGATCTGAAC 57.102 29.630 0.00 4.32 35.07 3.18
2190 5035 5.596268 TGTTTGAAGTCATGATCTGAACG 57.404 39.130 0.00 0.00 35.07 3.95
2191 5036 5.296748 TGTTTGAAGTCATGATCTGAACGA 58.703 37.500 0.00 0.00 35.07 3.85
2192 5037 5.406477 TGTTTGAAGTCATGATCTGAACGAG 59.594 40.000 0.00 0.00 35.07 4.18
2193 5038 4.790765 TGAAGTCATGATCTGAACGAGT 57.209 40.909 0.00 0.00 35.07 4.18
2194 5039 4.738124 TGAAGTCATGATCTGAACGAGTC 58.262 43.478 0.00 0.00 35.07 3.36
2195 5040 3.412981 AGTCATGATCTGAACGAGTCG 57.587 47.619 11.85 11.85 35.07 4.18
2196 5041 1.849219 GTCATGATCTGAACGAGTCGC 59.151 52.381 13.59 0.00 35.07 5.19
2197 5042 1.472480 TCATGATCTGAACGAGTCGCA 59.528 47.619 13.59 2.26 0.00 5.10
2198 5043 1.585668 CATGATCTGAACGAGTCGCAC 59.414 52.381 13.59 7.53 0.00 5.34
2199 5044 0.596082 TGATCTGAACGAGTCGCACA 59.404 50.000 13.59 11.91 0.00 4.57
2200 5045 1.202348 TGATCTGAACGAGTCGCACAT 59.798 47.619 13.59 0.00 0.00 3.21
2201 5046 2.422127 TGATCTGAACGAGTCGCACATA 59.578 45.455 13.59 6.29 0.00 2.29
2202 5047 2.257974 TCTGAACGAGTCGCACATAC 57.742 50.000 13.59 0.00 0.00 2.39
2203 5048 1.538075 TCTGAACGAGTCGCACATACA 59.462 47.619 13.59 3.41 0.00 2.29
2204 5049 1.649171 CTGAACGAGTCGCACATACAC 59.351 52.381 13.59 0.00 0.00 2.90
2205 5050 0.989890 GAACGAGTCGCACATACACC 59.010 55.000 13.59 0.00 0.00 4.16
2206 5051 0.389426 AACGAGTCGCACATACACCC 60.389 55.000 13.59 0.00 0.00 4.61
2207 5052 1.248785 ACGAGTCGCACATACACCCT 61.249 55.000 13.59 0.00 0.00 4.34
2208 5053 0.736636 CGAGTCGCACATACACCCTA 59.263 55.000 0.00 0.00 0.00 3.53
2209 5054 1.268589 CGAGTCGCACATACACCCTAG 60.269 57.143 0.00 0.00 0.00 3.02
2210 5055 0.460311 AGTCGCACATACACCCTAGC 59.540 55.000 0.00 0.00 0.00 3.42
2211 5056 0.174845 GTCGCACATACACCCTAGCA 59.825 55.000 0.00 0.00 0.00 3.49
2212 5057 0.174845 TCGCACATACACCCTAGCAC 59.825 55.000 0.00 0.00 0.00 4.40
2213 5058 0.108377 CGCACATACACCCTAGCACA 60.108 55.000 0.00 0.00 0.00 4.57
2214 5059 1.473257 CGCACATACACCCTAGCACAT 60.473 52.381 0.00 0.00 0.00 3.21
2215 5060 1.942657 GCACATACACCCTAGCACATG 59.057 52.381 0.00 0.00 0.00 3.21
2216 5061 2.680805 GCACATACACCCTAGCACATGT 60.681 50.000 0.00 0.00 0.00 3.21
2217 5062 3.609853 CACATACACCCTAGCACATGTT 58.390 45.455 0.00 0.00 0.00 2.71
2218 5063 3.623060 CACATACACCCTAGCACATGTTC 59.377 47.826 0.00 0.00 0.00 3.18
2219 5064 3.206150 CATACACCCTAGCACATGTTCC 58.794 50.000 0.00 0.00 0.00 3.62
2220 5065 1.362224 ACACCCTAGCACATGTTCCT 58.638 50.000 0.00 0.00 0.00 3.36
2221 5066 1.279271 ACACCCTAGCACATGTTCCTC 59.721 52.381 0.00 0.00 0.00 3.71
2222 5067 0.537188 ACCCTAGCACATGTTCCTCG 59.463 55.000 0.00 0.00 0.00 4.63
2223 5068 0.824109 CCCTAGCACATGTTCCTCGA 59.176 55.000 0.00 0.00 0.00 4.04
2224 5069 1.202463 CCCTAGCACATGTTCCTCGAG 60.202 57.143 5.13 5.13 0.00 4.04
2225 5070 1.202463 CCTAGCACATGTTCCTCGAGG 60.202 57.143 26.32 26.32 0.00 4.63
2226 5071 1.751351 CTAGCACATGTTCCTCGAGGA 59.249 52.381 30.49 30.49 43.73 3.71
2227 5072 0.247736 AGCACATGTTCCTCGAGGAC 59.752 55.000 33.75 25.95 45.39 3.85
2228 5073 0.247736 GCACATGTTCCTCGAGGACT 59.752 55.000 33.75 18.15 45.39 3.85
2229 5074 1.737363 GCACATGTTCCTCGAGGACTC 60.737 57.143 33.75 26.75 45.39 3.36
2242 5087 3.571571 CGAGGACTCGTCAATGTTAACA 58.428 45.455 11.41 11.41 46.99 2.41
2243 5088 3.608506 CGAGGACTCGTCAATGTTAACAG 59.391 47.826 14.65 1.35 46.99 3.16
2244 5089 4.615223 CGAGGACTCGTCAATGTTAACAGA 60.615 45.833 14.65 3.94 46.99 3.41
2245 5090 5.407407 AGGACTCGTCAATGTTAACAGAT 57.593 39.130 14.65 2.64 0.00 2.90
2246 5091 5.411781 AGGACTCGTCAATGTTAACAGATC 58.588 41.667 14.65 4.01 0.00 2.75
2247 5092 4.567159 GGACTCGTCAATGTTAACAGATCC 59.433 45.833 14.65 6.90 0.00 3.36
2248 5093 4.174009 ACTCGTCAATGTTAACAGATCCG 58.826 43.478 14.65 12.99 0.00 4.18
2249 5094 2.927477 TCGTCAATGTTAACAGATCCGC 59.073 45.455 14.65 1.70 0.00 5.54
2250 5095 2.670905 CGTCAATGTTAACAGATCCGCA 59.329 45.455 14.65 0.00 0.00 5.69
2251 5096 3.124466 CGTCAATGTTAACAGATCCGCAA 59.876 43.478 14.65 0.00 0.00 4.85
2252 5097 4.403453 GTCAATGTTAACAGATCCGCAAC 58.597 43.478 14.65 0.62 0.00 4.17
2253 5098 3.438781 TCAATGTTAACAGATCCGCAACC 59.561 43.478 14.65 0.00 0.00 3.77
2254 5099 2.851263 TGTTAACAGATCCGCAACCT 57.149 45.000 3.59 0.00 0.00 3.50
2255 5100 3.965379 TGTTAACAGATCCGCAACCTA 57.035 42.857 3.59 0.00 0.00 3.08
2256 5101 4.481368 TGTTAACAGATCCGCAACCTAT 57.519 40.909 3.59 0.00 0.00 2.57
2257 5102 4.839121 TGTTAACAGATCCGCAACCTATT 58.161 39.130 3.59 0.00 0.00 1.73
2258 5103 4.634004 TGTTAACAGATCCGCAACCTATTG 59.366 41.667 3.59 0.00 38.99 1.90
2259 5104 3.350219 AACAGATCCGCAACCTATTGT 57.650 42.857 0.00 0.00 38.17 2.71
2260 5105 2.906354 ACAGATCCGCAACCTATTGTC 58.094 47.619 0.00 0.00 38.17 3.18
2261 5106 2.501723 ACAGATCCGCAACCTATTGTCT 59.498 45.455 0.00 0.00 38.17 3.41
2262 5107 3.055094 ACAGATCCGCAACCTATTGTCTT 60.055 43.478 0.00 0.00 38.17 3.01
2263 5108 3.310774 CAGATCCGCAACCTATTGTCTTG 59.689 47.826 0.00 0.00 38.17 3.02
2264 5109 3.197766 AGATCCGCAACCTATTGTCTTGA 59.802 43.478 0.00 0.00 38.17 3.02
2265 5110 3.627395 TCCGCAACCTATTGTCTTGAT 57.373 42.857 0.00 0.00 38.17 2.57
2266 5111 4.746535 TCCGCAACCTATTGTCTTGATA 57.253 40.909 0.00 0.00 38.17 2.15
2267 5112 5.290493 TCCGCAACCTATTGTCTTGATAT 57.710 39.130 0.00 0.00 38.17 1.63
2268 5113 5.297547 TCCGCAACCTATTGTCTTGATATC 58.702 41.667 0.00 0.00 38.17 1.63
2269 5114 5.056480 CCGCAACCTATTGTCTTGATATCA 58.944 41.667 0.00 0.00 38.17 2.15
2270 5115 5.527214 CCGCAACCTATTGTCTTGATATCAA 59.473 40.000 17.07 17.07 38.17 2.57
2271 5116 6.038161 CCGCAACCTATTGTCTTGATATCAAA 59.962 38.462 18.47 4.91 38.17 2.69
2272 5117 6.907212 CGCAACCTATTGTCTTGATATCAAAC 59.093 38.462 18.47 17.61 38.17 2.93
2273 5118 6.907212 GCAACCTATTGTCTTGATATCAAACG 59.093 38.462 18.47 8.72 38.17 3.60
2274 5119 7.201609 GCAACCTATTGTCTTGATATCAAACGA 60.202 37.037 18.47 17.23 38.17 3.85
2275 5120 8.830580 CAACCTATTGTCTTGATATCAAACGAT 58.169 33.333 18.47 21.32 35.15 3.73
2277 5122 9.698309 ACCTATTGTCTTGATATCAAACGATAG 57.302 33.333 29.90 29.90 46.19 2.08
2278 5123 9.144747 CCTATTGTCTTGATATCAAACGATAGG 57.855 37.037 34.08 34.08 43.77 2.57
2279 5124 9.914131 CTATTGTCTTGATATCAAACGATAGGA 57.086 33.333 29.63 19.06 43.77 2.94
2280 5125 8.594881 ATTGTCTTGATATCAAACGATAGGAC 57.405 34.615 18.47 18.23 43.77 3.85
2281 5126 6.513180 TGTCTTGATATCAAACGATAGGACC 58.487 40.000 18.47 6.84 43.77 4.46
2282 5127 6.097696 TGTCTTGATATCAAACGATAGGACCA 59.902 38.462 18.47 8.80 43.77 4.02
2283 5128 6.642950 GTCTTGATATCAAACGATAGGACCAG 59.357 42.308 18.47 3.13 43.77 4.00
2284 5129 6.323996 TCTTGATATCAAACGATAGGACCAGT 59.676 38.462 18.47 0.00 43.77 4.00
2285 5130 6.479972 TGATATCAAACGATAGGACCAGTT 57.520 37.500 1.98 0.00 43.77 3.16
2286 5131 6.280643 TGATATCAAACGATAGGACCAGTTG 58.719 40.000 1.98 0.00 43.77 3.16
2287 5132 4.819105 ATCAAACGATAGGACCAGTTGA 57.181 40.909 0.00 0.00 43.77 3.18
2288 5133 3.921677 TCAAACGATAGGACCAGTTGAC 58.078 45.455 0.00 0.00 43.77 3.18
2289 5134 3.322541 TCAAACGATAGGACCAGTTGACA 59.677 43.478 0.00 0.00 43.77 3.58
2290 5135 4.062293 CAAACGATAGGACCAGTTGACAA 58.938 43.478 0.00 0.00 43.77 3.18
2291 5136 4.553330 AACGATAGGACCAGTTGACAAT 57.447 40.909 0.00 0.00 43.77 2.71
2292 5137 4.553330 ACGATAGGACCAGTTGACAATT 57.447 40.909 0.00 0.00 43.77 2.32
2293 5138 4.253685 ACGATAGGACCAGTTGACAATTG 58.746 43.478 3.24 3.24 43.77 2.32
2294 5139 4.020573 ACGATAGGACCAGTTGACAATTGA 60.021 41.667 13.59 0.00 43.77 2.57
2295 5140 4.935205 CGATAGGACCAGTTGACAATTGAA 59.065 41.667 13.59 0.00 0.00 2.69
2296 5141 5.586243 CGATAGGACCAGTTGACAATTGAAT 59.414 40.000 13.59 0.29 0.00 2.57
2297 5142 6.761242 CGATAGGACCAGTTGACAATTGAATA 59.239 38.462 13.59 0.00 0.00 1.75
2298 5143 7.254455 CGATAGGACCAGTTGACAATTGAATAC 60.254 40.741 13.59 6.47 0.00 1.89
2299 5144 5.630121 AGGACCAGTTGACAATTGAATACA 58.370 37.500 13.59 4.07 0.00 2.29
2300 5145 6.068010 AGGACCAGTTGACAATTGAATACAA 58.932 36.000 13.59 9.70 40.42 2.41
2301 5146 6.721208 AGGACCAGTTGACAATTGAATACAAT 59.279 34.615 13.59 0.00 46.99 2.71
2342 5187 7.962964 CTATCCATAATAGTGCGGAAAGAAA 57.037 36.000 0.00 0.00 33.86 2.52
2343 5188 6.867662 ATCCATAATAGTGCGGAAAGAAAG 57.132 37.500 0.00 0.00 0.00 2.62
2344 5189 4.574828 TCCATAATAGTGCGGAAAGAAAGC 59.425 41.667 0.00 0.00 0.00 3.51
2345 5190 4.261197 CCATAATAGTGCGGAAAGAAAGCC 60.261 45.833 0.00 0.00 0.00 4.35
2346 5191 1.751437 ATAGTGCGGAAAGAAAGCCC 58.249 50.000 0.00 0.00 0.00 5.19
2347 5192 0.672401 TAGTGCGGAAAGAAAGCCCG 60.672 55.000 0.00 0.00 45.51 6.13
2348 5193 2.671619 TGCGGAAAGAAAGCCCGG 60.672 61.111 0.00 0.00 43.17 5.73
2349 5194 2.359478 GCGGAAAGAAAGCCCGGA 60.359 61.111 0.73 0.00 43.17 5.14
2350 5195 2.399356 GCGGAAAGAAAGCCCGGAG 61.399 63.158 0.73 0.00 43.17 4.63
2363 5208 3.393360 CGGAGGAAGAGTGCCCTT 58.607 61.111 0.00 0.00 31.84 3.95
2364 5209 1.078848 CGGAGGAAGAGTGCCCTTG 60.079 63.158 0.00 0.00 31.84 3.61
2365 5210 1.544825 CGGAGGAAGAGTGCCCTTGA 61.545 60.000 0.00 0.00 31.84 3.02
2366 5211 0.251634 GGAGGAAGAGTGCCCTTGAG 59.748 60.000 0.00 0.00 31.84 3.02
2367 5212 0.980423 GAGGAAGAGTGCCCTTGAGT 59.020 55.000 0.00 0.00 31.84 3.41
2368 5213 1.349357 GAGGAAGAGTGCCCTTGAGTT 59.651 52.381 0.00 0.00 31.84 3.01
2369 5214 1.777272 AGGAAGAGTGCCCTTGAGTTT 59.223 47.619 0.00 0.00 0.00 2.66
2370 5215 2.155279 GGAAGAGTGCCCTTGAGTTTC 58.845 52.381 0.00 0.00 0.00 2.78
2371 5216 2.224646 GGAAGAGTGCCCTTGAGTTTCT 60.225 50.000 0.00 0.00 0.00 2.52
2372 5217 2.849294 AGAGTGCCCTTGAGTTTCTC 57.151 50.000 0.00 0.00 0.00 2.87
2373 5218 1.001406 AGAGTGCCCTTGAGTTTCTCG 59.999 52.381 0.00 0.00 32.35 4.04
2374 5219 0.603975 AGTGCCCTTGAGTTTCTCGC 60.604 55.000 0.00 0.00 32.35 5.03
2375 5220 1.302511 TGCCCTTGAGTTTCTCGCC 60.303 57.895 0.00 0.00 32.35 5.54
2376 5221 2.041115 GCCCTTGAGTTTCTCGCCC 61.041 63.158 0.00 0.00 32.35 6.13
2377 5222 1.377333 CCCTTGAGTTTCTCGCCCC 60.377 63.158 0.00 0.00 32.35 5.80
2378 5223 1.679898 CCTTGAGTTTCTCGCCCCT 59.320 57.895 0.00 0.00 32.35 4.79
2379 5224 0.036875 CCTTGAGTTTCTCGCCCCTT 59.963 55.000 0.00 0.00 32.35 3.95
2380 5225 1.545651 CCTTGAGTTTCTCGCCCCTTT 60.546 52.381 0.00 0.00 32.35 3.11
2381 5226 1.537202 CTTGAGTTTCTCGCCCCTTTG 59.463 52.381 0.00 0.00 32.35 2.77
2382 5227 0.889186 TGAGTTTCTCGCCCCTTTGC 60.889 55.000 0.00 0.00 32.35 3.68
2383 5228 1.587043 GAGTTTCTCGCCCCTTTGCC 61.587 60.000 0.00 0.00 0.00 4.52
2384 5229 1.603739 GTTTCTCGCCCCTTTGCCT 60.604 57.895 0.00 0.00 0.00 4.75
2385 5230 1.152830 TTTCTCGCCCCTTTGCCTT 59.847 52.632 0.00 0.00 0.00 4.35
2386 5231 0.402504 TTTCTCGCCCCTTTGCCTTA 59.597 50.000 0.00 0.00 0.00 2.69
2387 5232 0.035439 TTCTCGCCCCTTTGCCTTAG 60.035 55.000 0.00 0.00 0.00 2.18
2388 5233 1.452108 CTCGCCCCTTTGCCTTAGG 60.452 63.158 0.00 0.00 0.00 2.69
2389 5234 1.910580 CTCGCCCCTTTGCCTTAGGA 61.911 60.000 0.69 0.00 34.56 2.94
2390 5235 1.227383 CGCCCCTTTGCCTTAGGAT 59.773 57.895 0.69 0.00 34.56 3.24
2391 5236 0.819666 CGCCCCTTTGCCTTAGGATC 60.820 60.000 0.69 0.00 34.56 3.36
2392 5237 0.468214 GCCCCTTTGCCTTAGGATCC 60.468 60.000 2.48 2.48 34.56 3.36
2393 5238 0.179018 CCCCTTTGCCTTAGGATCCG 60.179 60.000 5.98 0.00 34.56 4.18
2394 5239 0.546598 CCCTTTGCCTTAGGATCCGT 59.453 55.000 5.98 0.00 34.56 4.69
2395 5240 1.064685 CCCTTTGCCTTAGGATCCGTT 60.065 52.381 5.98 0.00 34.56 4.44
2396 5241 2.171870 CCCTTTGCCTTAGGATCCGTTA 59.828 50.000 5.98 0.00 34.56 3.18
2397 5242 3.371166 CCCTTTGCCTTAGGATCCGTTAA 60.371 47.826 5.98 0.00 34.56 2.01
2398 5243 4.461198 CCTTTGCCTTAGGATCCGTTAAT 58.539 43.478 5.98 0.00 34.56 1.40
2399 5244 4.887655 CCTTTGCCTTAGGATCCGTTAATT 59.112 41.667 5.98 0.00 34.56 1.40
2400 5245 5.008712 CCTTTGCCTTAGGATCCGTTAATTC 59.991 44.000 5.98 0.00 34.56 2.17
2401 5246 5.367945 TTGCCTTAGGATCCGTTAATTCT 57.632 39.130 5.98 0.00 0.00 2.40
2402 5247 4.957296 TGCCTTAGGATCCGTTAATTCTC 58.043 43.478 5.98 0.00 0.00 2.87
2403 5248 4.654262 TGCCTTAGGATCCGTTAATTCTCT 59.346 41.667 5.98 0.00 0.00 3.10
2404 5249 5.130477 TGCCTTAGGATCCGTTAATTCTCTT 59.870 40.000 5.98 0.00 0.00 2.85
2405 5250 6.056236 GCCTTAGGATCCGTTAATTCTCTTT 58.944 40.000 5.98 0.00 0.00 2.52
2406 5251 6.203145 GCCTTAGGATCCGTTAATTCTCTTTC 59.797 42.308 5.98 0.00 0.00 2.62
2407 5252 7.501844 CCTTAGGATCCGTTAATTCTCTTTCT 58.498 38.462 5.98 0.00 0.00 2.52
2408 5253 7.654116 CCTTAGGATCCGTTAATTCTCTTTCTC 59.346 40.741 5.98 0.00 0.00 2.87
2409 5254 5.593010 AGGATCCGTTAATTCTCTTTCTCG 58.407 41.667 5.98 0.00 0.00 4.04
2410 5255 5.360144 AGGATCCGTTAATTCTCTTTCTCGA 59.640 40.000 5.98 0.00 0.00 4.04
2411 5256 6.041069 AGGATCCGTTAATTCTCTTTCTCGAT 59.959 38.462 5.98 0.00 0.00 3.59
2412 5257 6.144724 GGATCCGTTAATTCTCTTTCTCGATG 59.855 42.308 0.00 0.00 0.00 3.84
2413 5258 5.348986 TCCGTTAATTCTCTTTCTCGATGG 58.651 41.667 0.00 0.00 0.00 3.51
2414 5259 4.508124 CCGTTAATTCTCTTTCTCGATGGG 59.492 45.833 0.00 0.00 0.00 4.00
2415 5260 5.348986 CGTTAATTCTCTTTCTCGATGGGA 58.651 41.667 0.00 0.00 0.00 4.37
2416 5261 5.232414 CGTTAATTCTCTTTCTCGATGGGAC 59.768 44.000 0.00 0.00 0.00 4.46
2417 5262 2.941453 TTCTCTTTCTCGATGGGACG 57.059 50.000 0.00 0.00 0.00 4.79
2418 5263 1.103803 TCTCTTTCTCGATGGGACGG 58.896 55.000 0.00 0.00 0.00 4.79
2419 5264 0.103208 CTCTTTCTCGATGGGACGGG 59.897 60.000 0.00 0.00 34.84 5.28
2420 5265 1.144057 CTTTCTCGATGGGACGGGG 59.856 63.158 0.00 0.00 34.26 5.73
2421 5266 1.305465 TTTCTCGATGGGACGGGGA 60.305 57.895 0.00 0.00 34.26 4.81
2422 5267 0.905809 TTTCTCGATGGGACGGGGAA 60.906 55.000 0.00 0.00 34.26 3.97
2423 5268 1.327690 TTCTCGATGGGACGGGGAAG 61.328 60.000 0.00 0.00 34.26 3.46
2424 5269 2.762459 TCGATGGGACGGGGAAGG 60.762 66.667 0.00 0.00 0.00 3.46
2425 5270 3.861797 CGATGGGACGGGGAAGGG 61.862 72.222 0.00 0.00 0.00 3.95
2426 5271 2.366435 GATGGGACGGGGAAGGGA 60.366 66.667 0.00 0.00 0.00 4.20
2427 5272 1.770518 GATGGGACGGGGAAGGGAT 60.771 63.158 0.00 0.00 0.00 3.85
2428 5273 0.473117 GATGGGACGGGGAAGGGATA 60.473 60.000 0.00 0.00 0.00 2.59
2429 5274 0.196118 ATGGGACGGGGAAGGGATAT 59.804 55.000 0.00 0.00 0.00 1.63
2430 5275 0.868894 TGGGACGGGGAAGGGATATA 59.131 55.000 0.00 0.00 0.00 0.86
2431 5276 1.223598 TGGGACGGGGAAGGGATATAA 59.776 52.381 0.00 0.00 0.00 0.98
2432 5277 1.627329 GGGACGGGGAAGGGATATAAC 59.373 57.143 0.00 0.00 0.00 1.89
2433 5278 2.617658 GGACGGGGAAGGGATATAACT 58.382 52.381 0.00 0.00 0.00 2.24
2434 5279 2.566279 GGACGGGGAAGGGATATAACTC 59.434 54.545 0.00 0.00 0.00 3.01
2435 5280 3.236896 GACGGGGAAGGGATATAACTCA 58.763 50.000 0.00 0.00 0.00 3.41
2436 5281 3.240302 ACGGGGAAGGGATATAACTCAG 58.760 50.000 0.00 0.00 0.00 3.35
2437 5282 2.028020 CGGGGAAGGGATATAACTCAGC 60.028 54.545 0.00 0.00 0.00 4.26
2438 5283 2.028020 GGGGAAGGGATATAACTCAGCG 60.028 54.545 0.00 0.00 0.00 5.18
2439 5284 2.028020 GGGAAGGGATATAACTCAGCGG 60.028 54.545 0.00 0.00 0.00 5.52
2440 5285 2.633481 GGAAGGGATATAACTCAGCGGT 59.367 50.000 0.00 0.00 0.00 5.68
2441 5286 3.830755 GGAAGGGATATAACTCAGCGGTA 59.169 47.826 0.00 0.00 0.00 4.02
2442 5287 4.082136 GGAAGGGATATAACTCAGCGGTAG 60.082 50.000 0.00 0.00 0.00 3.18
2443 5288 4.383931 AGGGATATAACTCAGCGGTAGA 57.616 45.455 0.00 0.00 0.00 2.59
2444 5289 4.337145 AGGGATATAACTCAGCGGTAGAG 58.663 47.826 11.00 11.00 39.04 2.43
2446 5291 4.082679 GGGATATAACTCAGCGGTAGAGTG 60.083 50.000 16.61 0.00 45.11 3.51
2447 5292 4.519730 GGATATAACTCAGCGGTAGAGTGT 59.480 45.833 16.61 12.33 45.11 3.55
2448 5293 5.335035 GGATATAACTCAGCGGTAGAGTGTC 60.335 48.000 16.61 12.86 45.11 3.67
2449 5294 1.617322 AACTCAGCGGTAGAGTGTCA 58.383 50.000 16.61 0.00 45.11 3.58
2450 5295 0.882474 ACTCAGCGGTAGAGTGTCAC 59.118 55.000 15.61 0.00 44.23 3.67
2451 5296 0.171455 CTCAGCGGTAGAGTGTCACC 59.829 60.000 0.00 0.00 0.00 4.02
2452 5297 0.251209 TCAGCGGTAGAGTGTCACCT 60.251 55.000 0.00 0.00 32.29 4.00
2453 5298 0.603569 CAGCGGTAGAGTGTCACCTT 59.396 55.000 0.00 0.00 32.29 3.50
2454 5299 0.603569 AGCGGTAGAGTGTCACCTTG 59.396 55.000 0.00 0.00 32.29 3.61
2455 5300 0.601558 GCGGTAGAGTGTCACCTTGA 59.398 55.000 0.00 0.00 32.29 3.02
2465 5310 2.859165 GTCACCTTGACATGGAGGAA 57.141 50.000 14.05 4.26 46.22 3.36
2466 5311 2.704572 GTCACCTTGACATGGAGGAAG 58.295 52.381 14.05 9.63 46.22 3.46
2467 5312 2.039084 GTCACCTTGACATGGAGGAAGT 59.961 50.000 14.05 0.00 46.22 3.01
2468 5313 2.303022 TCACCTTGACATGGAGGAAGTC 59.697 50.000 14.05 0.00 36.84 3.01
2469 5314 2.038952 CACCTTGACATGGAGGAAGTCA 59.961 50.000 14.05 0.00 40.24 3.41
2470 5315 2.915604 ACCTTGACATGGAGGAAGTCAT 59.084 45.455 14.05 0.00 41.42 3.06
2471 5316 3.054802 ACCTTGACATGGAGGAAGTCATC 60.055 47.826 14.05 0.00 41.42 2.92
2472 5317 3.054875 CCTTGACATGGAGGAAGTCATCA 60.055 47.826 0.96 0.00 41.42 3.07
2473 5318 3.900966 TGACATGGAGGAAGTCATCAG 57.099 47.619 0.00 0.00 37.36 2.90
2474 5319 3.176411 TGACATGGAGGAAGTCATCAGT 58.824 45.455 0.00 0.00 37.36 3.41
2475 5320 3.584406 TGACATGGAGGAAGTCATCAGTT 59.416 43.478 0.00 0.00 37.36 3.16
2476 5321 4.187694 GACATGGAGGAAGTCATCAGTTC 58.812 47.826 0.00 0.00 32.68 3.01
2477 5322 3.193263 CATGGAGGAAGTCATCAGTTCG 58.807 50.000 0.00 0.00 33.22 3.95
2478 5323 2.525368 TGGAGGAAGTCATCAGTTCGA 58.475 47.619 0.00 0.00 33.22 3.71
2479 5324 2.493675 TGGAGGAAGTCATCAGTTCGAG 59.506 50.000 0.00 0.00 33.22 4.04
2480 5325 2.535331 GAGGAAGTCATCAGTTCGAGC 58.465 52.381 0.00 0.00 33.22 5.03
2481 5326 1.205893 AGGAAGTCATCAGTTCGAGCC 59.794 52.381 0.00 0.00 33.22 4.70
2482 5327 1.205893 GGAAGTCATCAGTTCGAGCCT 59.794 52.381 0.00 0.00 33.22 4.58
2483 5328 2.266554 GAAGTCATCAGTTCGAGCCTG 58.733 52.381 7.63 7.63 0.00 4.85
2484 5329 1.550327 AGTCATCAGTTCGAGCCTGA 58.450 50.000 16.31 16.31 42.74 3.86
2486 5331 2.499289 AGTCATCAGTTCGAGCCTGATT 59.501 45.455 20.77 9.34 45.12 2.57
2487 5332 3.701542 AGTCATCAGTTCGAGCCTGATTA 59.298 43.478 20.77 13.85 45.12 1.75
2488 5333 4.343526 AGTCATCAGTTCGAGCCTGATTAT 59.656 41.667 20.77 11.02 45.12 1.28
2489 5334 4.683781 GTCATCAGTTCGAGCCTGATTATC 59.316 45.833 20.77 13.09 45.12 1.75
2490 5335 3.735237 TCAGTTCGAGCCTGATTATCC 57.265 47.619 11.56 0.00 34.12 2.59
2491 5336 2.365617 TCAGTTCGAGCCTGATTATCCC 59.634 50.000 11.56 0.00 34.12 3.85
2492 5337 2.366916 CAGTTCGAGCCTGATTATCCCT 59.633 50.000 8.12 0.00 31.38 4.20
2493 5338 3.574396 CAGTTCGAGCCTGATTATCCCTA 59.426 47.826 8.12 0.00 31.38 3.53
2494 5339 4.039245 CAGTTCGAGCCTGATTATCCCTAA 59.961 45.833 8.12 0.00 31.38 2.69
2495 5340 4.654262 AGTTCGAGCCTGATTATCCCTAAA 59.346 41.667 0.00 0.00 0.00 1.85
2496 5341 4.602340 TCGAGCCTGATTATCCCTAAAC 57.398 45.455 0.00 0.00 0.00 2.01
2497 5342 3.323979 TCGAGCCTGATTATCCCTAAACC 59.676 47.826 0.00 0.00 0.00 3.27
2498 5343 3.557264 CGAGCCTGATTATCCCTAAACCC 60.557 52.174 0.00 0.00 0.00 4.11
2499 5344 3.394606 GAGCCTGATTATCCCTAAACCCA 59.605 47.826 0.00 0.00 0.00 4.51
2500 5345 3.791545 AGCCTGATTATCCCTAAACCCAA 59.208 43.478 0.00 0.00 0.00 4.12
2501 5346 4.420214 AGCCTGATTATCCCTAAACCCAAT 59.580 41.667 0.00 0.00 0.00 3.16
2502 5347 4.524328 GCCTGATTATCCCTAAACCCAATG 59.476 45.833 0.00 0.00 0.00 2.82
2503 5348 5.705400 CCTGATTATCCCTAAACCCAATGT 58.295 41.667 0.00 0.00 0.00 2.71
2504 5349 5.536161 CCTGATTATCCCTAAACCCAATGTG 59.464 44.000 0.00 0.00 0.00 3.21
2505 5350 6.334378 TGATTATCCCTAAACCCAATGTGA 57.666 37.500 0.00 0.00 0.00 3.58
2506 5351 6.364701 TGATTATCCCTAAACCCAATGTGAG 58.635 40.000 0.00 0.00 0.00 3.51
2507 5352 5.789574 TTATCCCTAAACCCAATGTGAGT 57.210 39.130 0.00 0.00 0.00 3.41
2508 5353 4.675063 ATCCCTAAACCCAATGTGAGTT 57.325 40.909 0.00 0.00 0.00 3.01
2509 5354 4.463050 TCCCTAAACCCAATGTGAGTTT 57.537 40.909 0.00 0.00 37.47 2.66
2510 5355 4.810345 TCCCTAAACCCAATGTGAGTTTT 58.190 39.130 0.00 0.00 35.45 2.43
2511 5356 5.212745 TCCCTAAACCCAATGTGAGTTTTT 58.787 37.500 0.00 0.00 35.45 1.94
2532 5377 7.770366 TTTTTCTATTTTGACTTACTCCCCC 57.230 36.000 0.00 0.00 0.00 5.40
2533 5378 6.457159 TTTCTATTTTGACTTACTCCCCCA 57.543 37.500 0.00 0.00 0.00 4.96
2534 5379 5.431179 TCTATTTTGACTTACTCCCCCAC 57.569 43.478 0.00 0.00 0.00 4.61
2535 5380 2.963599 TTTTGACTTACTCCCCCACC 57.036 50.000 0.00 0.00 0.00 4.61
2536 5381 1.822425 TTTGACTTACTCCCCCACCA 58.178 50.000 0.00 0.00 0.00 4.17
2537 5382 1.061546 TTGACTTACTCCCCCACCAC 58.938 55.000 0.00 0.00 0.00 4.16
2538 5383 1.189524 TGACTTACTCCCCCACCACG 61.190 60.000 0.00 0.00 0.00 4.94
2539 5384 0.901580 GACTTACTCCCCCACCACGA 60.902 60.000 0.00 0.00 0.00 4.35
2540 5385 0.903454 ACTTACTCCCCCACCACGAG 60.903 60.000 0.00 0.00 0.00 4.18
2541 5386 2.240162 CTTACTCCCCCACCACGAGC 62.240 65.000 0.00 0.00 0.00 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 2849 1.123928 AGGCATTAAGAGACCCTCCG 58.876 55.000 0.00 0.00 0.00 4.63
143 2969 3.204306 TCCTTCCTGAATGCAGCATAG 57.796 47.619 8.75 3.01 40.91 2.23
152 2978 3.495806 GGAGCGATTCATCCTTCCTGAAT 60.496 47.826 0.00 0.00 44.04 2.57
156 2982 1.415659 CAGGAGCGATTCATCCTTCCT 59.584 52.381 4.97 2.32 43.62 3.36
185 3011 5.059833 CCTTTTCGGGAGAGAATCAATAGG 58.940 45.833 0.00 0.00 41.75 2.57
202 3028 4.398044 TGAAGTAAATCATCGCCCCTTTTC 59.602 41.667 0.00 0.00 0.00 2.29
204 3030 3.694566 GTGAAGTAAATCATCGCCCCTTT 59.305 43.478 0.00 0.00 0.00 3.11
205 3031 3.279434 GTGAAGTAAATCATCGCCCCTT 58.721 45.455 0.00 0.00 0.00 3.95
400 3241 7.514127 ACAAGATACTATCATTACCACCTGGAT 59.486 37.037 0.00 0.00 38.94 3.41
407 3248 9.429109 TTCAGGTACAAGATACTATCATTACCA 57.571 33.333 16.10 2.69 34.85 3.25
439 3280 5.652014 CCCCATTACATAGAAAAAGTGAGCA 59.348 40.000 0.00 0.00 0.00 4.26
454 3295 3.199442 TCAGTCCTCTTCCCCATTACA 57.801 47.619 0.00 0.00 0.00 2.41
521 3362 3.643792 CCATCCTACCTCCTCTACCTTTG 59.356 52.174 0.00 0.00 0.00 2.77
553 3394 7.769507 GTCCATGTACGATCCATACTAGATCTA 59.230 40.741 1.69 1.69 38.39 1.98
618 3459 0.402566 CTCTTCCCCAGGGATCCCAT 60.403 60.000 32.69 14.92 44.74 4.00
887 3729 8.522830 TCTTAAGAATGCTGGTTTTAAGAATGG 58.477 33.333 1.68 0.00 37.39 3.16
1062 3904 4.929808 AGCTTACAACTTTCATCGTACTGG 59.070 41.667 0.00 0.00 0.00 4.00
1161 4003 1.144057 GACATCCGCCACAGGGTAG 59.856 63.158 0.00 0.00 36.17 3.18
1244 4086 4.440525 CGACCTGCTGAATTGGCAAAATAT 60.441 41.667 3.01 0.00 39.30 1.28
1245 4087 3.119531 CGACCTGCTGAATTGGCAAAATA 60.120 43.478 3.01 0.00 39.30 1.40
1264 4106 6.346120 CCGTGAATGTGAAATCATAGATCGAC 60.346 42.308 0.00 0.00 0.00 4.20
1287 4129 3.181479 TGGAAGGATCTTATCAACGTCCG 60.181 47.826 0.00 0.00 34.19 4.79
1341 4183 0.800012 TTGAACCTCGCCATTAACGC 59.200 50.000 0.00 0.00 0.00 4.84
1509 4353 0.689623 CCAGGTTGTCTCTTGCCTCT 59.310 55.000 0.00 0.00 0.00 3.69
1510 4354 0.957888 GCCAGGTTGTCTCTTGCCTC 60.958 60.000 0.00 0.00 0.00 4.70
1551 4395 3.997021 CGCTTTTGCTTTCTTCTCCTCTA 59.003 43.478 0.00 0.00 44.80 2.43
1558 4402 3.245797 GGGAATCGCTTTTGCTTTCTTC 58.754 45.455 0.00 0.00 44.80 2.87
1637 4481 2.724403 GCACAACGCTTGTATTGCC 58.276 52.632 3.60 0.00 43.23 4.52
1658 4502 1.429463 CACTCAACCACTTCGCCTAC 58.571 55.000 0.00 0.00 0.00 3.18
2053 4898 4.100035 CCATTCATTCCTTTTAAGCTCCCC 59.900 45.833 0.00 0.00 0.00 4.81
2054 4899 4.442052 GCCATTCATTCCTTTTAAGCTCCC 60.442 45.833 0.00 0.00 0.00 4.30
2055 4900 4.403752 AGCCATTCATTCCTTTTAAGCTCC 59.596 41.667 0.00 0.00 0.00 4.70
2056 4901 5.451103 GGAGCCATTCATTCCTTTTAAGCTC 60.451 44.000 0.00 0.00 41.68 4.09
2057 4902 4.403752 GGAGCCATTCATTCCTTTTAAGCT 59.596 41.667 0.00 0.00 0.00 3.74
2058 4903 4.403752 AGGAGCCATTCATTCCTTTTAAGC 59.596 41.667 0.00 0.00 38.13 3.09
2059 4904 7.286316 ACATAGGAGCCATTCATTCCTTTTAAG 59.714 37.037 0.00 0.00 41.46 1.85
2060 4905 7.125391 ACATAGGAGCCATTCATTCCTTTTAA 58.875 34.615 0.00 0.00 41.46 1.52
2061 4906 6.672593 ACATAGGAGCCATTCATTCCTTTTA 58.327 36.000 0.00 0.00 41.46 1.52
2062 4907 5.522641 ACATAGGAGCCATTCATTCCTTTT 58.477 37.500 0.00 0.00 41.46 2.27
2063 4908 5.134725 ACATAGGAGCCATTCATTCCTTT 57.865 39.130 0.00 0.00 41.46 3.11
2064 4909 4.803329 ACATAGGAGCCATTCATTCCTT 57.197 40.909 0.00 0.00 41.46 3.36
2065 4910 4.803329 AACATAGGAGCCATTCATTCCT 57.197 40.909 0.00 0.00 43.53 3.36
2066 4911 6.128172 CGATAAACATAGGAGCCATTCATTCC 60.128 42.308 0.00 0.00 0.00 3.01
2067 4912 6.650807 TCGATAAACATAGGAGCCATTCATTC 59.349 38.462 0.00 0.00 0.00 2.67
2068 4913 6.533730 TCGATAAACATAGGAGCCATTCATT 58.466 36.000 0.00 0.00 0.00 2.57
2069 4914 6.114187 TCGATAAACATAGGAGCCATTCAT 57.886 37.500 0.00 0.00 0.00 2.57
2070 4915 5.545063 TCGATAAACATAGGAGCCATTCA 57.455 39.130 0.00 0.00 0.00 2.57
2071 4916 5.758296 TGTTCGATAAACATAGGAGCCATTC 59.242 40.000 0.00 0.00 42.95 2.67
2072 4917 5.680619 TGTTCGATAAACATAGGAGCCATT 58.319 37.500 0.00 0.00 42.95 3.16
2073 4918 5.290493 TGTTCGATAAACATAGGAGCCAT 57.710 39.130 0.00 0.00 42.95 4.40
2074 4919 4.746535 TGTTCGATAAACATAGGAGCCA 57.253 40.909 0.00 0.00 42.95 4.75
2084 4929 5.758296 TCCATAAGCAGGATGTTCGATAAAC 59.242 40.000 0.00 0.00 39.31 2.01
2085 4930 5.758296 GTCCATAAGCAGGATGTTCGATAAA 59.242 40.000 0.00 0.00 39.31 1.40
2086 4931 5.070446 AGTCCATAAGCAGGATGTTCGATAA 59.930 40.000 0.00 0.00 39.31 1.75
2087 4932 4.588951 AGTCCATAAGCAGGATGTTCGATA 59.411 41.667 0.00 0.00 39.31 2.92
2088 4933 3.389329 AGTCCATAAGCAGGATGTTCGAT 59.611 43.478 0.00 0.00 39.31 3.59
2089 4934 2.766263 AGTCCATAAGCAGGATGTTCGA 59.234 45.455 0.00 0.00 39.31 3.71
2090 4935 3.126831 GAGTCCATAAGCAGGATGTTCG 58.873 50.000 0.00 0.00 39.31 3.95
2091 4936 3.126831 CGAGTCCATAAGCAGGATGTTC 58.873 50.000 0.00 0.00 39.31 3.18
2092 4937 2.766263 TCGAGTCCATAAGCAGGATGTT 59.234 45.455 0.00 0.00 39.31 2.71
2093 4938 2.388735 TCGAGTCCATAAGCAGGATGT 58.611 47.619 0.00 0.00 39.31 3.06
2094 4939 3.126831 GTTCGAGTCCATAAGCAGGATG 58.873 50.000 0.00 0.00 37.52 3.51
2095 4940 2.223829 CGTTCGAGTCCATAAGCAGGAT 60.224 50.000 0.00 0.00 37.52 3.24
2096 4941 1.134367 CGTTCGAGTCCATAAGCAGGA 59.866 52.381 0.00 0.00 0.00 3.86
2097 4942 1.560923 CGTTCGAGTCCATAAGCAGG 58.439 55.000 0.00 0.00 0.00 4.85
2098 4943 1.560923 CCGTTCGAGTCCATAAGCAG 58.439 55.000 0.00 0.00 0.00 4.24
2099 4944 0.174845 CCCGTTCGAGTCCATAAGCA 59.825 55.000 0.00 0.00 0.00 3.91
2100 4945 0.529992 CCCCGTTCGAGTCCATAAGC 60.530 60.000 0.00 0.00 0.00 3.09
2101 4946 1.067212 CTCCCCGTTCGAGTCCATAAG 59.933 57.143 0.00 0.00 0.00 1.73
2102 4947 1.108776 CTCCCCGTTCGAGTCCATAA 58.891 55.000 0.00 0.00 0.00 1.90
2103 4948 1.389609 GCTCCCCGTTCGAGTCCATA 61.390 60.000 0.00 0.00 0.00 2.74
2104 4949 2.722201 GCTCCCCGTTCGAGTCCAT 61.722 63.158 0.00 0.00 0.00 3.41
2105 4950 3.379445 GCTCCCCGTTCGAGTCCA 61.379 66.667 0.00 0.00 0.00 4.02
2106 4951 1.318158 TAAGCTCCCCGTTCGAGTCC 61.318 60.000 0.00 0.00 0.00 3.85
2107 4952 0.529378 TTAAGCTCCCCGTTCGAGTC 59.471 55.000 0.00 0.00 0.00 3.36
2108 4953 0.971386 TTTAAGCTCCCCGTTCGAGT 59.029 50.000 0.00 0.00 0.00 4.18
2109 4954 2.202566 GATTTAAGCTCCCCGTTCGAG 58.797 52.381 0.00 0.00 0.00 4.04
2110 4955 1.134610 GGATTTAAGCTCCCCGTTCGA 60.135 52.381 0.00 0.00 0.00 3.71
2111 4956 1.296727 GGATTTAAGCTCCCCGTTCG 58.703 55.000 0.00 0.00 0.00 3.95
2112 4957 2.413310 TGGATTTAAGCTCCCCGTTC 57.587 50.000 0.00 0.00 31.32 3.95
2113 4958 3.382083 AATGGATTTAAGCTCCCCGTT 57.618 42.857 0.00 0.00 31.32 4.44
2114 4959 3.458487 ACTAATGGATTTAAGCTCCCCGT 59.542 43.478 0.00 0.00 31.32 5.28
2115 4960 4.086706 ACTAATGGATTTAAGCTCCCCG 57.913 45.455 0.00 0.00 31.32 5.73
2116 4961 6.189036 AGTACTAATGGATTTAAGCTCCCC 57.811 41.667 0.00 0.00 31.32 4.81
2117 4962 9.438228 GATTAGTACTAATGGATTTAAGCTCCC 57.562 37.037 28.61 8.66 36.02 4.30
2118 4963 9.998106 TGATTAGTACTAATGGATTTAAGCTCC 57.002 33.333 28.61 12.33 36.02 4.70
2163 5008 9.897744 GTTCAGATCATGACTTCAAACAAATAA 57.102 29.630 0.00 0.00 37.77 1.40
2164 5009 8.229811 CGTTCAGATCATGACTTCAAACAAATA 58.770 33.333 0.00 0.00 37.77 1.40
2165 5010 7.041167 TCGTTCAGATCATGACTTCAAACAAAT 60.041 33.333 0.00 0.00 37.77 2.32
2166 5011 6.259829 TCGTTCAGATCATGACTTCAAACAAA 59.740 34.615 0.00 0.00 37.77 2.83
2167 5012 5.757808 TCGTTCAGATCATGACTTCAAACAA 59.242 36.000 0.00 0.00 37.77 2.83
2168 5013 5.296748 TCGTTCAGATCATGACTTCAAACA 58.703 37.500 0.00 0.00 37.77 2.83
2169 5014 5.406780 ACTCGTTCAGATCATGACTTCAAAC 59.593 40.000 0.00 1.53 37.77 2.93
2170 5015 5.541845 ACTCGTTCAGATCATGACTTCAAA 58.458 37.500 0.00 0.00 37.77 2.69
2171 5016 5.139435 ACTCGTTCAGATCATGACTTCAA 57.861 39.130 0.00 0.00 37.77 2.69
2172 5017 4.672801 CGACTCGTTCAGATCATGACTTCA 60.673 45.833 0.00 0.00 37.77 3.02
2173 5018 3.788694 CGACTCGTTCAGATCATGACTTC 59.211 47.826 0.00 0.00 37.77 3.01
2174 5019 3.763902 CGACTCGTTCAGATCATGACTT 58.236 45.455 0.00 0.00 37.77 3.01
2175 5020 2.478709 GCGACTCGTTCAGATCATGACT 60.479 50.000 0.00 0.00 37.77 3.41
2176 5021 1.849219 GCGACTCGTTCAGATCATGAC 59.151 52.381 0.00 0.00 37.77 3.06
2177 5022 1.472480 TGCGACTCGTTCAGATCATGA 59.528 47.619 0.00 0.00 35.62 3.07
2178 5023 1.585668 GTGCGACTCGTTCAGATCATG 59.414 52.381 0.00 0.00 0.00 3.07
2179 5024 1.202348 TGTGCGACTCGTTCAGATCAT 59.798 47.619 0.00 0.00 0.00 2.45
2180 5025 0.596082 TGTGCGACTCGTTCAGATCA 59.404 50.000 0.00 0.00 0.00 2.92
2181 5026 1.914634 ATGTGCGACTCGTTCAGATC 58.085 50.000 0.00 0.00 0.00 2.75
2182 5027 2.163613 TGTATGTGCGACTCGTTCAGAT 59.836 45.455 0.00 0.00 0.00 2.90
2183 5028 1.538075 TGTATGTGCGACTCGTTCAGA 59.462 47.619 0.00 0.00 0.00 3.27
2184 5029 1.649171 GTGTATGTGCGACTCGTTCAG 59.351 52.381 0.00 0.00 0.00 3.02
2185 5030 1.667756 GGTGTATGTGCGACTCGTTCA 60.668 52.381 0.00 0.67 0.00 3.18
2186 5031 0.989890 GGTGTATGTGCGACTCGTTC 59.010 55.000 0.00 0.00 0.00 3.95
2187 5032 0.389426 GGGTGTATGTGCGACTCGTT 60.389 55.000 0.00 0.00 0.00 3.85
2188 5033 1.214589 GGGTGTATGTGCGACTCGT 59.785 57.895 0.00 0.00 0.00 4.18
2189 5034 0.736636 TAGGGTGTATGTGCGACTCG 59.263 55.000 0.00 0.00 0.00 4.18
2190 5035 1.536284 GCTAGGGTGTATGTGCGACTC 60.536 57.143 0.00 0.00 0.00 3.36
2191 5036 0.460311 GCTAGGGTGTATGTGCGACT 59.540 55.000 0.00 0.00 0.00 4.18
2192 5037 0.174845 TGCTAGGGTGTATGTGCGAC 59.825 55.000 0.00 0.00 0.00 5.19
2193 5038 0.174845 GTGCTAGGGTGTATGTGCGA 59.825 55.000 0.00 0.00 0.00 5.10
2194 5039 0.108377 TGTGCTAGGGTGTATGTGCG 60.108 55.000 0.00 0.00 0.00 5.34
2195 5040 1.942657 CATGTGCTAGGGTGTATGTGC 59.057 52.381 0.00 0.00 0.00 4.57
2196 5041 3.266510 ACATGTGCTAGGGTGTATGTG 57.733 47.619 0.00 0.00 0.00 3.21
2197 5042 3.370527 GGAACATGTGCTAGGGTGTATGT 60.371 47.826 3.21 0.00 0.00 2.29
2198 5043 3.118261 AGGAACATGTGCTAGGGTGTATG 60.118 47.826 3.21 0.00 0.00 2.39
2199 5044 3.115390 AGGAACATGTGCTAGGGTGTAT 58.885 45.455 3.21 0.00 0.00 2.29
2200 5045 2.500098 GAGGAACATGTGCTAGGGTGTA 59.500 50.000 3.21 0.00 0.00 2.90
2201 5046 1.279271 GAGGAACATGTGCTAGGGTGT 59.721 52.381 3.21 0.00 0.00 4.16
2202 5047 1.740380 CGAGGAACATGTGCTAGGGTG 60.740 57.143 3.21 0.00 0.00 4.61
2203 5048 0.537188 CGAGGAACATGTGCTAGGGT 59.463 55.000 3.21 0.00 0.00 4.34
2204 5049 0.824109 TCGAGGAACATGTGCTAGGG 59.176 55.000 3.21 0.00 0.00 3.53
2205 5050 1.202463 CCTCGAGGAACATGTGCTAGG 60.202 57.143 28.21 2.54 37.39 3.02
2206 5051 1.751351 TCCTCGAGGAACATGTGCTAG 59.249 52.381 31.91 0.57 42.18 3.42
2207 5052 1.847328 TCCTCGAGGAACATGTGCTA 58.153 50.000 31.91 4.74 42.18 3.49
2208 5053 2.671145 TCCTCGAGGAACATGTGCT 58.329 52.632 31.91 0.00 42.18 4.40
2222 5067 4.806330 TCTGTTAACATTGACGAGTCCTC 58.194 43.478 9.13 0.00 0.00 3.71
2223 5068 4.866508 TCTGTTAACATTGACGAGTCCT 57.133 40.909 9.13 0.00 0.00 3.85
2224 5069 4.567159 GGATCTGTTAACATTGACGAGTCC 59.433 45.833 9.13 4.41 0.00 3.85
2225 5070 4.265556 CGGATCTGTTAACATTGACGAGTC 59.734 45.833 9.13 0.00 0.00 3.36
2226 5071 4.174009 CGGATCTGTTAACATTGACGAGT 58.826 43.478 9.13 0.00 0.00 4.18
2227 5072 3.000322 GCGGATCTGTTAACATTGACGAG 60.000 47.826 19.97 5.14 0.00 4.18
2228 5073 2.927477 GCGGATCTGTTAACATTGACGA 59.073 45.455 19.97 10.73 0.00 4.20
2229 5074 2.670905 TGCGGATCTGTTAACATTGACG 59.329 45.455 9.13 12.59 0.00 4.35
2230 5075 4.403453 GTTGCGGATCTGTTAACATTGAC 58.597 43.478 9.13 1.67 0.00 3.18
2231 5076 3.438781 GGTTGCGGATCTGTTAACATTGA 59.561 43.478 9.13 4.31 0.00 2.57
2232 5077 3.440173 AGGTTGCGGATCTGTTAACATTG 59.560 43.478 9.13 0.00 0.00 2.82
2233 5078 3.686016 AGGTTGCGGATCTGTTAACATT 58.314 40.909 9.13 0.00 0.00 2.71
2234 5079 3.350219 AGGTTGCGGATCTGTTAACAT 57.650 42.857 9.13 12.81 0.00 2.71
2235 5080 2.851263 AGGTTGCGGATCTGTTAACA 57.149 45.000 18.97 8.28 0.00 2.41
2236 5081 4.634443 ACAATAGGTTGCGGATCTGTTAAC 59.366 41.667 2.89 8.98 38.96 2.01
2237 5082 4.839121 ACAATAGGTTGCGGATCTGTTAA 58.161 39.130 2.89 0.00 38.96 2.01
2238 5083 4.161565 AGACAATAGGTTGCGGATCTGTTA 59.838 41.667 2.89 0.00 38.96 2.41
2239 5084 3.055094 AGACAATAGGTTGCGGATCTGTT 60.055 43.478 2.89 0.00 38.96 3.16
2240 5085 2.501723 AGACAATAGGTTGCGGATCTGT 59.498 45.455 2.89 0.00 38.96 3.41
2241 5086 3.185246 AGACAATAGGTTGCGGATCTG 57.815 47.619 0.00 0.00 38.96 2.90
2242 5087 3.197766 TCAAGACAATAGGTTGCGGATCT 59.802 43.478 0.00 0.00 38.96 2.75
2243 5088 3.531538 TCAAGACAATAGGTTGCGGATC 58.468 45.455 0.00 0.00 38.96 3.36
2244 5089 3.627395 TCAAGACAATAGGTTGCGGAT 57.373 42.857 0.00 0.00 38.96 4.18
2245 5090 3.627395 ATCAAGACAATAGGTTGCGGA 57.373 42.857 0.00 0.00 38.96 5.54
2246 5091 5.056480 TGATATCAAGACAATAGGTTGCGG 58.944 41.667 1.98 0.00 38.96 5.69
2247 5092 6.603237 TTGATATCAAGACAATAGGTTGCG 57.397 37.500 14.23 0.00 38.96 4.85
2248 5093 6.907212 CGTTTGATATCAAGACAATAGGTTGC 59.093 38.462 17.28 0.00 36.67 4.17
2249 5094 8.196802 TCGTTTGATATCAAGACAATAGGTTG 57.803 34.615 17.28 5.45 37.97 3.77
2250 5095 8.964476 ATCGTTTGATATCAAGACAATAGGTT 57.036 30.769 17.28 1.70 37.15 3.50
2251 5096 9.698309 CTATCGTTTGATATCAAGACAATAGGT 57.302 33.333 17.28 5.41 36.51 3.08
2252 5097 9.144747 CCTATCGTTTGATATCAAGACAATAGG 57.855 37.037 24.47 24.47 36.51 2.57
2253 5098 9.914131 TCCTATCGTTTGATATCAAGACAATAG 57.086 33.333 17.28 18.54 36.51 1.73
2254 5099 9.692749 GTCCTATCGTTTGATATCAAGACAATA 57.307 33.333 17.28 12.33 36.51 1.90
2255 5100 7.657761 GGTCCTATCGTTTGATATCAAGACAAT 59.342 37.037 22.73 15.71 36.51 2.71
2256 5101 6.984474 GGTCCTATCGTTTGATATCAAGACAA 59.016 38.462 22.73 11.45 36.51 3.18
2257 5102 6.097696 TGGTCCTATCGTTTGATATCAAGACA 59.902 38.462 22.73 11.90 36.51 3.41
2258 5103 6.513180 TGGTCCTATCGTTTGATATCAAGAC 58.487 40.000 17.28 17.24 36.51 3.01
2259 5104 6.323996 ACTGGTCCTATCGTTTGATATCAAGA 59.676 38.462 17.28 12.94 36.51 3.02
2260 5105 6.516718 ACTGGTCCTATCGTTTGATATCAAG 58.483 40.000 17.28 8.12 36.51 3.02
2261 5106 6.479972 ACTGGTCCTATCGTTTGATATCAA 57.520 37.500 14.23 14.23 36.51 2.57
2262 5107 6.097696 TCAACTGGTCCTATCGTTTGATATCA 59.902 38.462 0.00 0.00 36.51 2.15
2263 5108 6.421202 GTCAACTGGTCCTATCGTTTGATATC 59.579 42.308 0.00 0.00 36.51 1.63
2264 5109 6.127168 TGTCAACTGGTCCTATCGTTTGATAT 60.127 38.462 0.00 0.00 36.51 1.63
2265 5110 5.186215 TGTCAACTGGTCCTATCGTTTGATA 59.814 40.000 0.00 0.00 35.99 2.15
2266 5111 4.020573 TGTCAACTGGTCCTATCGTTTGAT 60.021 41.667 0.00 0.00 38.67 2.57
2267 5112 3.322541 TGTCAACTGGTCCTATCGTTTGA 59.677 43.478 0.00 0.00 0.00 2.69
2268 5113 3.659786 TGTCAACTGGTCCTATCGTTTG 58.340 45.455 0.00 0.00 0.00 2.93
2269 5114 4.345859 TTGTCAACTGGTCCTATCGTTT 57.654 40.909 0.00 0.00 0.00 3.60
2270 5115 4.553330 ATTGTCAACTGGTCCTATCGTT 57.447 40.909 0.00 0.00 0.00 3.85
2271 5116 4.020573 TCAATTGTCAACTGGTCCTATCGT 60.021 41.667 5.13 0.00 0.00 3.73
2272 5117 4.503910 TCAATTGTCAACTGGTCCTATCG 58.496 43.478 5.13 0.00 0.00 2.92
2273 5118 7.552687 TGTATTCAATTGTCAACTGGTCCTATC 59.447 37.037 5.13 0.00 0.00 2.08
2274 5119 7.402054 TGTATTCAATTGTCAACTGGTCCTAT 58.598 34.615 5.13 0.00 0.00 2.57
2275 5120 6.774673 TGTATTCAATTGTCAACTGGTCCTA 58.225 36.000 5.13 0.00 0.00 2.94
2276 5121 5.630121 TGTATTCAATTGTCAACTGGTCCT 58.370 37.500 5.13 0.00 0.00 3.85
2277 5122 5.957842 TGTATTCAATTGTCAACTGGTCC 57.042 39.130 5.13 0.00 0.00 4.46
2309 5154 9.383519 CCGCACTATTATGGATAGTCAAATAAT 57.616 33.333 1.75 0.00 46.28 1.28
2310 5155 8.590204 TCCGCACTATTATGGATAGTCAAATAA 58.410 33.333 1.75 0.00 46.28 1.40
2311 5156 8.129496 TCCGCACTATTATGGATAGTCAAATA 57.871 34.615 1.75 0.00 46.28 1.40
2312 5157 7.004555 TCCGCACTATTATGGATAGTCAAAT 57.995 36.000 1.75 0.00 46.28 2.32
2313 5158 6.413783 TCCGCACTATTATGGATAGTCAAA 57.586 37.500 1.75 0.00 46.28 2.69
2314 5159 6.413783 TTCCGCACTATTATGGATAGTCAA 57.586 37.500 1.75 0.00 46.28 3.18
2315 5160 6.266786 TCTTTCCGCACTATTATGGATAGTCA 59.733 38.462 1.75 0.00 46.28 3.41
2316 5161 6.688578 TCTTTCCGCACTATTATGGATAGTC 58.311 40.000 1.75 0.00 46.28 2.59
2318 5163 7.360438 GCTTTCTTTCCGCACTATTATGGATAG 60.360 40.741 0.00 0.00 42.88 2.08
2319 5164 6.426937 GCTTTCTTTCCGCACTATTATGGATA 59.573 38.462 0.00 0.00 0.00 2.59
2320 5165 5.239525 GCTTTCTTTCCGCACTATTATGGAT 59.760 40.000 0.00 0.00 0.00 3.41
2321 5166 4.574828 GCTTTCTTTCCGCACTATTATGGA 59.425 41.667 0.00 0.00 0.00 3.41
2322 5167 4.261197 GGCTTTCTTTCCGCACTATTATGG 60.261 45.833 0.00 0.00 0.00 2.74
2323 5168 4.261197 GGGCTTTCTTTCCGCACTATTATG 60.261 45.833 0.00 0.00 0.00 1.90
2324 5169 3.883489 GGGCTTTCTTTCCGCACTATTAT 59.117 43.478 0.00 0.00 0.00 1.28
2325 5170 3.275999 GGGCTTTCTTTCCGCACTATTA 58.724 45.455 0.00 0.00 0.00 0.98
2326 5171 2.092323 GGGCTTTCTTTCCGCACTATT 58.908 47.619 0.00 0.00 0.00 1.73
2327 5172 1.751437 GGGCTTTCTTTCCGCACTAT 58.249 50.000 0.00 0.00 0.00 2.12
2328 5173 0.672401 CGGGCTTTCTTTCCGCACTA 60.672 55.000 0.00 0.00 37.25 2.74
2329 5174 1.966451 CGGGCTTTCTTTCCGCACT 60.966 57.895 0.00 0.00 37.25 4.40
2330 5175 2.561373 CGGGCTTTCTTTCCGCAC 59.439 61.111 0.00 0.00 37.25 5.34
2331 5176 2.671619 CCGGGCTTTCTTTCCGCA 60.672 61.111 0.00 0.00 42.18 5.69
2332 5177 2.359478 TCCGGGCTTTCTTTCCGC 60.359 61.111 0.00 0.00 42.18 5.54
2333 5178 1.745489 CCTCCGGGCTTTCTTTCCG 60.745 63.158 0.00 0.00 43.05 4.30
2334 5179 0.037734 TTCCTCCGGGCTTTCTTTCC 59.962 55.000 0.00 0.00 0.00 3.13
2335 5180 1.003233 TCTTCCTCCGGGCTTTCTTTC 59.997 52.381 0.00 0.00 0.00 2.62
2336 5181 1.003696 CTCTTCCTCCGGGCTTTCTTT 59.996 52.381 0.00 0.00 0.00 2.52
2337 5182 0.615850 CTCTTCCTCCGGGCTTTCTT 59.384 55.000 0.00 0.00 0.00 2.52
2338 5183 0.545548 ACTCTTCCTCCGGGCTTTCT 60.546 55.000 0.00 0.00 0.00 2.52
2339 5184 0.391793 CACTCTTCCTCCGGGCTTTC 60.392 60.000 0.00 0.00 0.00 2.62
2340 5185 1.679898 CACTCTTCCTCCGGGCTTT 59.320 57.895 0.00 0.00 0.00 3.51
2341 5186 2.960688 GCACTCTTCCTCCGGGCTT 61.961 63.158 0.00 0.00 0.00 4.35
2342 5187 3.394836 GCACTCTTCCTCCGGGCT 61.395 66.667 0.00 0.00 0.00 5.19
2343 5188 4.475135 GGCACTCTTCCTCCGGGC 62.475 72.222 0.00 0.00 0.00 6.13
2344 5189 3.787001 GGGCACTCTTCCTCCGGG 61.787 72.222 0.00 0.00 0.00 5.73
2345 5190 2.294078 AAGGGCACTCTTCCTCCGG 61.294 63.158 0.00 0.00 32.02 5.14
2346 5191 1.078848 CAAGGGCACTCTTCCTCCG 60.079 63.158 0.00 0.00 32.02 4.63
2347 5192 0.251634 CTCAAGGGCACTCTTCCTCC 59.748 60.000 0.00 0.00 32.02 4.30
2348 5193 0.980423 ACTCAAGGGCACTCTTCCTC 59.020 55.000 0.00 0.00 32.02 3.71
2349 5194 1.439543 AACTCAAGGGCACTCTTCCT 58.560 50.000 0.00 0.00 34.29 3.36
2350 5195 2.155279 GAAACTCAAGGGCACTCTTCC 58.845 52.381 0.00 0.00 0.00 3.46
2351 5196 3.070748 GAGAAACTCAAGGGCACTCTTC 58.929 50.000 0.00 0.00 0.00 2.87
2352 5197 2.548920 CGAGAAACTCAAGGGCACTCTT 60.549 50.000 0.00 0.00 0.00 2.85
2353 5198 1.001406 CGAGAAACTCAAGGGCACTCT 59.999 52.381 0.00 0.00 0.00 3.24
2354 5199 1.433534 CGAGAAACTCAAGGGCACTC 58.566 55.000 0.00 0.00 0.00 3.51
2355 5200 0.603975 GCGAGAAACTCAAGGGCACT 60.604 55.000 0.00 0.00 0.00 4.40
2356 5201 1.578206 GGCGAGAAACTCAAGGGCAC 61.578 60.000 0.00 0.00 0.00 5.01
2357 5202 1.302511 GGCGAGAAACTCAAGGGCA 60.303 57.895 0.00 0.00 0.00 5.36
2358 5203 2.041115 GGGCGAGAAACTCAAGGGC 61.041 63.158 0.00 0.00 0.00 5.19
2359 5204 1.377333 GGGGCGAGAAACTCAAGGG 60.377 63.158 0.00 0.00 0.00 3.95
2360 5205 0.036875 AAGGGGCGAGAAACTCAAGG 59.963 55.000 0.00 0.00 0.00 3.61
2361 5206 1.537202 CAAAGGGGCGAGAAACTCAAG 59.463 52.381 0.00 0.00 0.00 3.02
2362 5207 1.604604 CAAAGGGGCGAGAAACTCAA 58.395 50.000 0.00 0.00 0.00 3.02
2363 5208 0.889186 GCAAAGGGGCGAGAAACTCA 60.889 55.000 0.00 0.00 0.00 3.41
2364 5209 1.587043 GGCAAAGGGGCGAGAAACTC 61.587 60.000 0.00 0.00 33.57 3.01
2365 5210 1.603739 GGCAAAGGGGCGAGAAACT 60.604 57.895 0.00 0.00 33.57 2.66
2366 5211 2.962569 GGCAAAGGGGCGAGAAAC 59.037 61.111 0.00 0.00 33.57 2.78
2373 5218 0.468214 GGATCCTAAGGCAAAGGGGC 60.468 60.000 3.84 0.00 43.80 5.80
2374 5219 0.179018 CGGATCCTAAGGCAAAGGGG 60.179 60.000 10.75 0.00 34.66 4.79
2375 5220 0.546598 ACGGATCCTAAGGCAAAGGG 59.453 55.000 10.75 0.00 34.66 3.95
2376 5221 2.420058 AACGGATCCTAAGGCAAAGG 57.580 50.000 10.75 0.00 35.26 3.11
2377 5222 5.823045 AGAATTAACGGATCCTAAGGCAAAG 59.177 40.000 10.75 0.00 0.00 2.77
2378 5223 5.751586 AGAATTAACGGATCCTAAGGCAAA 58.248 37.500 10.75 0.00 0.00 3.68
2379 5224 5.130477 AGAGAATTAACGGATCCTAAGGCAA 59.870 40.000 10.75 0.00 0.00 4.52
2380 5225 4.654262 AGAGAATTAACGGATCCTAAGGCA 59.346 41.667 10.75 0.00 0.00 4.75
2381 5226 5.216614 AGAGAATTAACGGATCCTAAGGC 57.783 43.478 10.75 0.00 0.00 4.35
2382 5227 7.501844 AGAAAGAGAATTAACGGATCCTAAGG 58.498 38.462 10.75 0.00 0.00 2.69
2383 5228 7.380065 CGAGAAAGAGAATTAACGGATCCTAAG 59.620 40.741 10.75 0.00 0.00 2.18
2384 5229 7.067859 TCGAGAAAGAGAATTAACGGATCCTAA 59.932 37.037 10.75 2.88 0.00 2.69
2385 5230 6.544931 TCGAGAAAGAGAATTAACGGATCCTA 59.455 38.462 10.75 0.00 0.00 2.94
2386 5231 5.360144 TCGAGAAAGAGAATTAACGGATCCT 59.640 40.000 10.75 0.00 0.00 3.24
2387 5232 5.589192 TCGAGAAAGAGAATTAACGGATCC 58.411 41.667 0.00 0.00 0.00 3.36
2388 5233 6.144724 CCATCGAGAAAGAGAATTAACGGATC 59.855 42.308 0.00 0.00 0.00 3.36
2389 5234 5.986135 CCATCGAGAAAGAGAATTAACGGAT 59.014 40.000 0.00 0.00 0.00 4.18
2390 5235 5.348986 CCATCGAGAAAGAGAATTAACGGA 58.651 41.667 0.00 0.00 0.00 4.69
2391 5236 4.508124 CCCATCGAGAAAGAGAATTAACGG 59.492 45.833 0.00 0.00 0.00 4.44
2392 5237 5.232414 GTCCCATCGAGAAAGAGAATTAACG 59.768 44.000 0.00 0.00 0.00 3.18
2393 5238 5.232414 CGTCCCATCGAGAAAGAGAATTAAC 59.768 44.000 0.00 0.00 0.00 2.01
2394 5239 5.348986 CGTCCCATCGAGAAAGAGAATTAA 58.651 41.667 0.00 0.00 0.00 1.40
2395 5240 4.202121 CCGTCCCATCGAGAAAGAGAATTA 60.202 45.833 0.00 0.00 0.00 1.40
2396 5241 3.430929 CCGTCCCATCGAGAAAGAGAATT 60.431 47.826 0.00 0.00 0.00 2.17
2397 5242 2.101582 CCGTCCCATCGAGAAAGAGAAT 59.898 50.000 0.00 0.00 0.00 2.40
2398 5243 1.476891 CCGTCCCATCGAGAAAGAGAA 59.523 52.381 0.00 0.00 0.00 2.87
2399 5244 1.103803 CCGTCCCATCGAGAAAGAGA 58.896 55.000 0.00 0.00 0.00 3.10
2400 5245 0.103208 CCCGTCCCATCGAGAAAGAG 59.897 60.000 0.00 0.00 0.00 2.85
2401 5246 1.327690 CCCCGTCCCATCGAGAAAGA 61.328 60.000 0.00 0.00 0.00 2.52
2402 5247 1.144057 CCCCGTCCCATCGAGAAAG 59.856 63.158 0.00 0.00 0.00 2.62
2403 5248 0.905809 TTCCCCGTCCCATCGAGAAA 60.906 55.000 0.00 0.00 0.00 2.52
2404 5249 1.305465 TTCCCCGTCCCATCGAGAA 60.305 57.895 0.00 0.00 0.00 2.87
2405 5250 1.756950 CTTCCCCGTCCCATCGAGA 60.757 63.158 0.00 0.00 0.00 4.04
2406 5251 2.797278 CCTTCCCCGTCCCATCGAG 61.797 68.421 0.00 0.00 0.00 4.04
2407 5252 2.762459 CCTTCCCCGTCCCATCGA 60.762 66.667 0.00 0.00 0.00 3.59
2408 5253 3.861797 CCCTTCCCCGTCCCATCG 61.862 72.222 0.00 0.00 0.00 3.84
2409 5254 0.473117 TATCCCTTCCCCGTCCCATC 60.473 60.000 0.00 0.00 0.00 3.51
2410 5255 0.196118 ATATCCCTTCCCCGTCCCAT 59.804 55.000 0.00 0.00 0.00 4.00
2411 5256 0.868894 TATATCCCTTCCCCGTCCCA 59.131 55.000 0.00 0.00 0.00 4.37
2412 5257 1.627329 GTTATATCCCTTCCCCGTCCC 59.373 57.143 0.00 0.00 0.00 4.46
2413 5258 2.566279 GAGTTATATCCCTTCCCCGTCC 59.434 54.545 0.00 0.00 0.00 4.79
2414 5259 3.236896 TGAGTTATATCCCTTCCCCGTC 58.763 50.000 0.00 0.00 0.00 4.79
2415 5260 3.240302 CTGAGTTATATCCCTTCCCCGT 58.760 50.000 0.00 0.00 0.00 5.28
2416 5261 2.028020 GCTGAGTTATATCCCTTCCCCG 60.028 54.545 0.00 0.00 0.00 5.73
2417 5262 2.028020 CGCTGAGTTATATCCCTTCCCC 60.028 54.545 0.00 0.00 0.00 4.81
2418 5263 2.028020 CCGCTGAGTTATATCCCTTCCC 60.028 54.545 0.00 0.00 0.00 3.97
2419 5264 2.633481 ACCGCTGAGTTATATCCCTTCC 59.367 50.000 0.00 0.00 0.00 3.46
2420 5265 4.765856 TCTACCGCTGAGTTATATCCCTTC 59.234 45.833 0.00 0.00 0.00 3.46
2421 5266 4.737578 TCTACCGCTGAGTTATATCCCTT 58.262 43.478 0.00 0.00 0.00 3.95
2422 5267 4.202588 ACTCTACCGCTGAGTTATATCCCT 60.203 45.833 0.00 0.00 41.45 4.20
2423 5268 4.080687 ACTCTACCGCTGAGTTATATCCC 58.919 47.826 0.00 0.00 41.45 3.85
2424 5269 4.519730 ACACTCTACCGCTGAGTTATATCC 59.480 45.833 0.00 0.00 42.21 2.59
2425 5270 5.238868 TGACACTCTACCGCTGAGTTATATC 59.761 44.000 0.00 0.00 42.21 1.63
2426 5271 5.008811 GTGACACTCTACCGCTGAGTTATAT 59.991 44.000 0.00 0.00 42.21 0.86
2427 5272 4.334759 GTGACACTCTACCGCTGAGTTATA 59.665 45.833 0.00 0.00 42.21 0.98
2428 5273 3.128938 GTGACACTCTACCGCTGAGTTAT 59.871 47.826 0.00 0.00 42.21 1.89
2429 5274 2.486982 GTGACACTCTACCGCTGAGTTA 59.513 50.000 0.00 0.00 42.21 2.24
2430 5275 1.269998 GTGACACTCTACCGCTGAGTT 59.730 52.381 0.00 0.00 42.21 3.01
2431 5276 0.882474 GTGACACTCTACCGCTGAGT 59.118 55.000 0.00 0.00 44.62 3.41
2432 5277 0.171455 GGTGACACTCTACCGCTGAG 59.829 60.000 5.39 0.00 37.55 3.35
2433 5278 0.251209 AGGTGACACTCTACCGCTGA 60.251 55.000 5.39 0.00 41.85 4.26
2434 5279 0.603569 AAGGTGACACTCTACCGCTG 59.396 55.000 5.39 0.00 41.85 5.18
2435 5280 0.603569 CAAGGTGACACTCTACCGCT 59.396 55.000 5.39 0.00 41.85 5.52
2436 5281 0.601558 TCAAGGTGACACTCTACCGC 59.398 55.000 5.39 0.00 41.85 5.68
2437 5282 2.349297 GTCAAGGTGACACTCTACCG 57.651 55.000 5.39 0.00 46.22 4.02
2447 5292 2.303022 GACTTCCTCCATGTCAAGGTGA 59.697 50.000 0.00 0.00 34.12 4.02
2448 5293 2.038952 TGACTTCCTCCATGTCAAGGTG 59.961 50.000 6.07 0.00 36.48 4.00
2449 5294 2.338809 TGACTTCCTCCATGTCAAGGT 58.661 47.619 6.07 0.00 36.48 3.50
2450 5295 3.054875 TGATGACTTCCTCCATGTCAAGG 60.055 47.826 0.00 0.00 41.28 3.61
2451 5296 4.190001 CTGATGACTTCCTCCATGTCAAG 58.810 47.826 0.00 0.00 41.28 3.02
2452 5297 3.584406 ACTGATGACTTCCTCCATGTCAA 59.416 43.478 0.00 0.00 41.28 3.18
2453 5298 3.176411 ACTGATGACTTCCTCCATGTCA 58.824 45.455 0.00 0.00 41.95 3.58
2454 5299 3.902881 ACTGATGACTTCCTCCATGTC 57.097 47.619 0.00 0.00 0.00 3.06
2455 5300 3.368843 CGAACTGATGACTTCCTCCATGT 60.369 47.826 0.00 0.00 0.00 3.21
2456 5301 3.118992 TCGAACTGATGACTTCCTCCATG 60.119 47.826 0.00 0.00 0.00 3.66
2457 5302 3.099905 TCGAACTGATGACTTCCTCCAT 58.900 45.455 0.00 0.00 0.00 3.41
2458 5303 2.493675 CTCGAACTGATGACTTCCTCCA 59.506 50.000 0.00 0.00 0.00 3.86
2459 5304 2.737039 GCTCGAACTGATGACTTCCTCC 60.737 54.545 0.00 0.00 0.00 4.30
2460 5305 2.535331 GCTCGAACTGATGACTTCCTC 58.465 52.381 0.00 0.00 0.00 3.71
2461 5306 1.205893 GGCTCGAACTGATGACTTCCT 59.794 52.381 0.00 0.00 0.00 3.36
2462 5307 1.205893 AGGCTCGAACTGATGACTTCC 59.794 52.381 0.00 0.00 0.00 3.46
2463 5308 2.094494 TCAGGCTCGAACTGATGACTTC 60.094 50.000 13.70 0.00 39.87 3.01
2464 5309 1.895798 TCAGGCTCGAACTGATGACTT 59.104 47.619 13.70 0.00 39.87 3.01
2465 5310 1.550327 TCAGGCTCGAACTGATGACT 58.450 50.000 13.70 0.00 39.87 3.41
2471 5316 2.366916 AGGGATAATCAGGCTCGAACTG 59.633 50.000 9.82 9.82 37.30 3.16
2472 5317 2.683768 AGGGATAATCAGGCTCGAACT 58.316 47.619 0.00 0.00 0.00 3.01
2473 5318 4.602340 TTAGGGATAATCAGGCTCGAAC 57.398 45.455 0.00 0.00 0.00 3.95
2474 5319 4.202326 GGTTTAGGGATAATCAGGCTCGAA 60.202 45.833 0.00 0.00 0.00 3.71
2475 5320 3.323979 GGTTTAGGGATAATCAGGCTCGA 59.676 47.826 0.00 0.00 0.00 4.04
2476 5321 3.557264 GGGTTTAGGGATAATCAGGCTCG 60.557 52.174 0.00 0.00 0.00 5.03
2477 5322 3.394606 TGGGTTTAGGGATAATCAGGCTC 59.605 47.826 0.00 0.00 0.00 4.70
2478 5323 3.403322 TGGGTTTAGGGATAATCAGGCT 58.597 45.455 0.00 0.00 0.00 4.58
2479 5324 3.876309 TGGGTTTAGGGATAATCAGGC 57.124 47.619 0.00 0.00 0.00 4.85
2480 5325 5.536161 CACATTGGGTTTAGGGATAATCAGG 59.464 44.000 0.00 0.00 0.00 3.86
2481 5326 6.364701 TCACATTGGGTTTAGGGATAATCAG 58.635 40.000 0.00 0.00 0.00 2.90
2482 5327 6.069088 ACTCACATTGGGTTTAGGGATAATCA 60.069 38.462 0.00 0.00 0.00 2.57
2483 5328 6.365520 ACTCACATTGGGTTTAGGGATAATC 58.634 40.000 0.00 0.00 0.00 1.75
2484 5329 6.341408 ACTCACATTGGGTTTAGGGATAAT 57.659 37.500 0.00 0.00 0.00 1.28
2485 5330 5.789574 ACTCACATTGGGTTTAGGGATAA 57.210 39.130 0.00 0.00 0.00 1.75
2486 5331 5.789574 AACTCACATTGGGTTTAGGGATA 57.210 39.130 0.00 0.00 37.96 2.59
2487 5332 4.675063 AACTCACATTGGGTTTAGGGAT 57.325 40.909 0.00 0.00 37.96 3.85
2508 5353 7.231925 GTGGGGGAGTAAGTCAAAATAGAAAAA 59.768 37.037 0.00 0.00 0.00 1.94
2509 5354 6.717997 GTGGGGGAGTAAGTCAAAATAGAAAA 59.282 38.462 0.00 0.00 0.00 2.29
2510 5355 6.243148 GTGGGGGAGTAAGTCAAAATAGAAA 58.757 40.000 0.00 0.00 0.00 2.52
2511 5356 5.280830 GGTGGGGGAGTAAGTCAAAATAGAA 60.281 44.000 0.00 0.00 0.00 2.10
2512 5357 4.226620 GGTGGGGGAGTAAGTCAAAATAGA 59.773 45.833 0.00 0.00 0.00 1.98
2513 5358 4.018779 TGGTGGGGGAGTAAGTCAAAATAG 60.019 45.833 0.00 0.00 0.00 1.73
2514 5359 3.917629 TGGTGGGGGAGTAAGTCAAAATA 59.082 43.478 0.00 0.00 0.00 1.40
2515 5360 2.719705 TGGTGGGGGAGTAAGTCAAAAT 59.280 45.455 0.00 0.00 0.00 1.82
2516 5361 2.136863 TGGTGGGGGAGTAAGTCAAAA 58.863 47.619 0.00 0.00 0.00 2.44
2517 5362 1.422402 GTGGTGGGGGAGTAAGTCAAA 59.578 52.381 0.00 0.00 0.00 2.69
2518 5363 1.061546 GTGGTGGGGGAGTAAGTCAA 58.938 55.000 0.00 0.00 0.00 3.18
2519 5364 1.189524 CGTGGTGGGGGAGTAAGTCA 61.190 60.000 0.00 0.00 0.00 3.41
2520 5365 0.901580 TCGTGGTGGGGGAGTAAGTC 60.902 60.000 0.00 0.00 0.00 3.01
2521 5366 0.903454 CTCGTGGTGGGGGAGTAAGT 60.903 60.000 0.00 0.00 0.00 2.24
2522 5367 1.898154 CTCGTGGTGGGGGAGTAAG 59.102 63.158 0.00 0.00 0.00 2.34
2523 5368 2.288025 GCTCGTGGTGGGGGAGTAA 61.288 63.158 0.00 0.00 0.00 2.24
2524 5369 2.682494 GCTCGTGGTGGGGGAGTA 60.682 66.667 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.