Multiple sequence alignment - TraesCS5D01G485100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G485100 chr5D 100.000 3452 0 0 1 3452 520859589 520863040 0.000000e+00 6375.0
1 TraesCS5D01G485100 chr5D 85.921 1932 199 45 634 2524 520887858 520889757 0.000000e+00 1993.0
2 TraesCS5D01G485100 chr5D 86.598 97 10 1 440 533 209314970 209315066 1.690000e-18 104.0
3 TraesCS5D01G485100 chr5D 86.598 97 9 3 441 534 356761353 356761448 1.690000e-18 104.0
4 TraesCS5D01G485100 chr5A 92.300 2078 121 25 549 2597 649401539 649403606 0.000000e+00 2915.0
5 TraesCS5D01G485100 chr5A 85.223 1976 208 51 634 2553 649426455 649428402 0.000000e+00 1954.0
6 TraesCS5D01G485100 chr5A 87.045 741 78 11 2714 3452 649403654 649404378 0.000000e+00 821.0
7 TraesCS5D01G485100 chr5A 89.888 89 5 3 450 535 12205266 12205179 1.010000e-20 111.0
8 TraesCS5D01G485100 chr5A 89.011 91 6 3 447 533 448109755 448109845 3.640000e-20 110.0
9 TraesCS5D01G485100 chr5A 80.180 111 13 8 427 533 465259791 465259896 1.330000e-09 75.0
10 TraesCS5D01G485100 chr5B 94.483 1740 79 9 826 2564 656804982 656806705 0.000000e+00 2665.0
11 TraesCS5D01G485100 chr5B 85.140 1965 209 50 634 2542 656838831 656840768 0.000000e+00 1934.0
12 TraesCS5D01G485100 chr5B 84.549 233 22 7 550 768 656804130 656804362 5.800000e-53 219.0
13 TraesCS5D01G485100 chr5B 86.747 166 20 2 221 386 637133747 637133584 2.120000e-42 183.0
14 TraesCS5D01G485100 chr1D 80.566 813 142 14 2650 3452 398920288 398921094 2.280000e-171 612.0
15 TraesCS5D01G485100 chr1A 80.000 810 150 11 2650 3452 495644301 495645105 3.840000e-164 588.0
16 TraesCS5D01G485100 chr1A 80.180 111 13 8 427 533 422088383 422088488 1.330000e-09 75.0
17 TraesCS5D01G485100 chr1B 80.415 771 136 13 2690 3452 534219281 534220044 1.070000e-159 573.0
18 TraesCS5D01G485100 chr1B 90.909 88 5 1 447 531 388797808 388797895 7.830000e-22 115.0
19 TraesCS5D01G485100 chr1B 80.734 109 12 8 427 533 337741554 337741655 3.690000e-10 76.8
20 TraesCS5D01G485100 chr3B 80.567 741 131 9 2715 3452 89699554 89700284 3.010000e-155 558.0
21 TraesCS5D01G485100 chr3B 86.826 167 19 3 221 386 76504393 76504557 2.120000e-42 183.0
22 TraesCS5D01G485100 chr3B 80.000 110 13 8 427 532 63188598 63188702 4.780000e-09 73.1
23 TraesCS5D01G485100 chr4B 83.139 599 96 4 2859 3452 262714327 262713729 3.030000e-150 542.0
24 TraesCS5D01G485100 chr4B 90.909 88 5 2 450 534 607437506 607437419 7.830000e-22 115.0
25 TraesCS5D01G485100 chr2D 81.498 681 106 14 2783 3452 262457362 262456691 3.030000e-150 542.0
26 TraesCS5D01G485100 chr2D 91.011 89 4 2 450 534 87247296 87247208 2.180000e-22 117.0
27 TraesCS5D01G485100 chr3A 80.420 715 127 10 2744 3452 226344679 226345386 1.820000e-147 532.0
28 TraesCS5D01G485100 chr6D 79.189 740 136 10 2712 3447 339159897 339160622 6.650000e-137 497.0
29 TraesCS5D01G485100 chr6D 80.357 112 11 10 427 533 83898422 83898527 1.330000e-09 75.0
30 TraesCS5D01G485100 chrUn 93.798 129 8 0 1295 1423 330993865 330993993 9.780000e-46 195.0
31 TraesCS5D01G485100 chr4A 93.798 129 8 0 1295 1423 645498090 645498218 9.780000e-46 195.0
32 TraesCS5D01G485100 chr4A 86.550 171 21 2 218 387 649346587 649346756 1.640000e-43 187.0
33 TraesCS5D01G485100 chr3D 87.195 164 19 2 224 386 29810369 29810207 5.880000e-43 185.0
34 TraesCS5D01G485100 chr3D 86.310 168 21 2 221 387 535501864 535502030 7.610000e-42 182.0
35 TraesCS5D01G485100 chr3D 87.500 96 5 6 445 535 336539269 336539176 1.690000e-18 104.0
36 TraesCS5D01G485100 chr2A 86.747 166 20 2 226 390 42015791 42015955 2.120000e-42 183.0
37 TraesCS5D01G485100 chr2A 89.888 89 5 2 450 534 87445056 87444968 1.010000e-20 111.0
38 TraesCS5D01G485100 chr2A 80.180 111 13 8 427 533 95514218 95514323 1.330000e-09 75.0
39 TraesCS5D01G485100 chr7B 86.228 167 21 2 221 386 654124318 654124483 2.740000e-41 180.0
40 TraesCS5D01G485100 chr7B 83.146 89 8 6 450 533 441417426 441417340 1.330000e-09 75.0
41 TraesCS5D01G485100 chr6B 86.228 167 21 2 221 386 692558890 692558725 2.740000e-41 180.0
42 TraesCS5D01G485100 chr6B 84.971 173 26 0 224 396 702855054 702854882 3.540000e-40 176.0
43 TraesCS5D01G485100 chr2B 82.955 88 10 5 450 533 159412731 159412645 1.330000e-09 75.0
44 TraesCS5D01G485100 chr2B 82.955 88 10 5 450 533 210371173 210371087 1.330000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G485100 chr5D 520859589 520863040 3451 False 6375 6375 100.0000 1 3452 1 chr5D.!!$F3 3451
1 TraesCS5D01G485100 chr5D 520887858 520889757 1899 False 1993 1993 85.9210 634 2524 1 chr5D.!!$F4 1890
2 TraesCS5D01G485100 chr5A 649426455 649428402 1947 False 1954 1954 85.2230 634 2553 1 chr5A.!!$F3 1919
3 TraesCS5D01G485100 chr5A 649401539 649404378 2839 False 1868 2915 89.6725 549 3452 2 chr5A.!!$F4 2903
4 TraesCS5D01G485100 chr5B 656838831 656840768 1937 False 1934 1934 85.1400 634 2542 1 chr5B.!!$F1 1908
5 TraesCS5D01G485100 chr5B 656804130 656806705 2575 False 1442 2665 89.5160 550 2564 2 chr5B.!!$F2 2014
6 TraesCS5D01G485100 chr1D 398920288 398921094 806 False 612 612 80.5660 2650 3452 1 chr1D.!!$F1 802
7 TraesCS5D01G485100 chr1A 495644301 495645105 804 False 588 588 80.0000 2650 3452 1 chr1A.!!$F2 802
8 TraesCS5D01G485100 chr1B 534219281 534220044 763 False 573 573 80.4150 2690 3452 1 chr1B.!!$F3 762
9 TraesCS5D01G485100 chr3B 89699554 89700284 730 False 558 558 80.5670 2715 3452 1 chr3B.!!$F3 737
10 TraesCS5D01G485100 chr4B 262713729 262714327 598 True 542 542 83.1390 2859 3452 1 chr4B.!!$R1 593
11 TraesCS5D01G485100 chr2D 262456691 262457362 671 True 542 542 81.4980 2783 3452 1 chr2D.!!$R2 669
12 TraesCS5D01G485100 chr3A 226344679 226345386 707 False 532 532 80.4200 2744 3452 1 chr3A.!!$F1 708
13 TraesCS5D01G485100 chr6D 339159897 339160622 725 False 497 497 79.1890 2712 3447 1 chr6D.!!$F2 735

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
271 272 0.037882 CCTTCAGCTCGCTTCAGTGA 60.038 55.0 0.0 0.0 0.0 3.41 F
534 535 0.042131 TGGGACGGAGGGAGTACATT 59.958 55.0 0.0 0.0 0.0 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1848 2549 1.664649 CTCGAAGCAGAACACGGCA 60.665 57.895 0.0 0.0 0.00 5.69 R
2522 3246 2.418368 TGCAGGTCTTTGTTGACTGT 57.582 45.000 0.0 0.0 37.16 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 7.538303 AAACATTCTGATTGTTTTTGTGGTC 57.462 32.000 19.46 0.00 42.96 4.02
84 85 5.600696 ACATTCTGATTGTTTTTGTGGTCC 58.399 37.500 0.00 0.00 0.00 4.46
85 86 5.128499 ACATTCTGATTGTTTTTGTGGTCCA 59.872 36.000 0.00 0.00 0.00 4.02
86 87 5.667539 TTCTGATTGTTTTTGTGGTCCAA 57.332 34.783 0.00 0.00 0.00 3.53
87 88 5.667539 TCTGATTGTTTTTGTGGTCCAAA 57.332 34.783 0.00 0.00 41.25 3.28
95 96 4.826274 TTTTGTGGTCCAAAATGGTTGA 57.174 36.364 0.00 0.00 45.68 3.18
96 97 4.826274 TTTGTGGTCCAAAATGGTTGAA 57.174 36.364 0.00 0.00 40.05 2.69
97 98 5.365021 TTTGTGGTCCAAAATGGTTGAAT 57.635 34.783 0.00 0.00 40.05 2.57
98 99 4.333913 TGTGGTCCAAAATGGTTGAATG 57.666 40.909 0.00 0.00 39.03 2.67
99 100 3.708631 TGTGGTCCAAAATGGTTGAATGT 59.291 39.130 0.00 0.00 39.03 2.71
100 101 4.057432 GTGGTCCAAAATGGTTGAATGTG 58.943 43.478 0.00 0.00 39.03 3.21
101 102 3.708631 TGGTCCAAAATGGTTGAATGTGT 59.291 39.130 0.00 0.00 39.03 3.72
102 103 4.057432 GGTCCAAAATGGTTGAATGTGTG 58.943 43.478 0.00 0.00 39.03 3.82
103 104 4.202202 GGTCCAAAATGGTTGAATGTGTGA 60.202 41.667 0.00 0.00 39.03 3.58
104 105 5.511202 GGTCCAAAATGGTTGAATGTGTGAT 60.511 40.000 0.00 0.00 39.03 3.06
105 106 5.406175 GTCCAAAATGGTTGAATGTGTGATG 59.594 40.000 0.00 0.00 39.03 3.07
106 107 4.152759 CCAAAATGGTTGAATGTGTGATGC 59.847 41.667 0.00 0.00 31.35 3.91
107 108 3.598019 AATGGTTGAATGTGTGATGCC 57.402 42.857 0.00 0.00 0.00 4.40
108 109 1.255882 TGGTTGAATGTGTGATGCCC 58.744 50.000 0.00 0.00 0.00 5.36
109 110 0.171007 GGTTGAATGTGTGATGCCCG 59.829 55.000 0.00 0.00 0.00 6.13
110 111 0.881118 GTTGAATGTGTGATGCCCGT 59.119 50.000 0.00 0.00 0.00 5.28
111 112 0.880441 TTGAATGTGTGATGCCCGTG 59.120 50.000 0.00 0.00 0.00 4.94
112 113 1.137404 GAATGTGTGATGCCCGTGC 59.863 57.895 0.00 0.00 38.26 5.34
113 114 2.270297 GAATGTGTGATGCCCGTGCC 62.270 60.000 0.00 0.00 36.33 5.01
114 115 3.565961 ATGTGTGATGCCCGTGCCA 62.566 57.895 0.00 0.00 36.33 4.92
115 116 2.983030 GTGTGATGCCCGTGCCAA 60.983 61.111 0.00 0.00 36.33 4.52
116 117 2.672651 TGTGATGCCCGTGCCAAG 60.673 61.111 0.00 0.00 36.33 3.61
117 118 2.672996 GTGATGCCCGTGCCAAGT 60.673 61.111 0.00 0.00 36.33 3.16
118 119 2.115052 TGATGCCCGTGCCAAGTT 59.885 55.556 0.00 0.00 36.33 2.66
119 120 1.530419 TGATGCCCGTGCCAAGTTT 60.530 52.632 0.00 0.00 36.33 2.66
120 121 1.212751 GATGCCCGTGCCAAGTTTC 59.787 57.895 0.00 0.00 36.33 2.78
121 122 2.527547 GATGCCCGTGCCAAGTTTCG 62.528 60.000 0.00 0.00 36.33 3.46
122 123 3.284449 GCCCGTGCCAAGTTTCGT 61.284 61.111 0.00 0.00 0.00 3.85
123 124 2.637025 CCCGTGCCAAGTTTCGTG 59.363 61.111 0.00 0.00 0.00 4.35
124 125 2.637025 CCGTGCCAAGTTTCGTGG 59.363 61.111 0.00 0.00 39.33 4.94
125 126 1.890041 CCGTGCCAAGTTTCGTGGA 60.890 57.895 5.95 0.00 38.54 4.02
126 127 1.569493 CGTGCCAAGTTTCGTGGAG 59.431 57.895 5.95 0.00 38.54 3.86
127 128 1.157870 CGTGCCAAGTTTCGTGGAGT 61.158 55.000 5.95 0.00 38.54 3.85
128 129 1.021968 GTGCCAAGTTTCGTGGAGTT 58.978 50.000 5.95 0.00 38.54 3.01
129 130 1.404035 GTGCCAAGTTTCGTGGAGTTT 59.596 47.619 5.95 0.00 38.54 2.66
130 131 1.403679 TGCCAAGTTTCGTGGAGTTTG 59.596 47.619 5.95 0.00 38.54 2.93
131 132 1.673920 GCCAAGTTTCGTGGAGTTTGA 59.326 47.619 5.95 0.00 38.54 2.69
132 133 2.098443 GCCAAGTTTCGTGGAGTTTGAA 59.902 45.455 5.95 0.00 38.54 2.69
133 134 3.428316 GCCAAGTTTCGTGGAGTTTGAAA 60.428 43.478 5.95 0.00 38.54 2.69
134 135 4.739195 CCAAGTTTCGTGGAGTTTGAAAA 58.261 39.130 0.00 0.00 38.54 2.29
135 136 5.348164 CCAAGTTTCGTGGAGTTTGAAAAT 58.652 37.500 0.00 0.00 38.54 1.82
136 137 5.810074 CCAAGTTTCGTGGAGTTTGAAAATT 59.190 36.000 0.00 0.00 39.57 1.82
137 138 6.019881 CCAAGTTTCGTGGAGTTTGAAAATTC 60.020 38.462 0.00 0.00 37.68 2.17
138 139 5.270853 AGTTTCGTGGAGTTTGAAAATTCG 58.729 37.500 0.00 0.00 33.78 3.34
139 140 5.065474 AGTTTCGTGGAGTTTGAAAATTCGA 59.935 36.000 0.00 0.00 33.78 3.71
140 141 4.725556 TCGTGGAGTTTGAAAATTCGAG 57.274 40.909 0.00 0.00 0.00 4.04
141 142 3.496884 TCGTGGAGTTTGAAAATTCGAGG 59.503 43.478 0.00 0.00 0.00 4.63
142 143 3.496884 CGTGGAGTTTGAAAATTCGAGGA 59.503 43.478 0.00 0.00 0.00 3.71
143 144 4.377431 CGTGGAGTTTGAAAATTCGAGGAG 60.377 45.833 0.00 0.00 0.00 3.69
144 145 3.502211 TGGAGTTTGAAAATTCGAGGAGC 59.498 43.478 0.00 0.00 0.00 4.70
145 146 3.753797 GGAGTTTGAAAATTCGAGGAGCT 59.246 43.478 0.00 0.00 0.00 4.09
146 147 4.142795 GGAGTTTGAAAATTCGAGGAGCTC 60.143 45.833 4.71 4.71 0.00 4.09
155 156 2.973899 GAGGAGCTCGTGGCAAGA 59.026 61.111 14.78 2.52 44.79 3.02
156 157 1.293498 GAGGAGCTCGTGGCAAGAA 59.707 57.895 14.78 0.00 44.79 2.52
157 158 0.320771 GAGGAGCTCGTGGCAAGAAA 60.321 55.000 14.78 0.00 44.79 2.52
158 159 0.603975 AGGAGCTCGTGGCAAGAAAC 60.604 55.000 8.40 0.00 44.79 2.78
159 160 0.884704 GGAGCTCGTGGCAAGAAACA 60.885 55.000 7.83 0.00 44.79 2.83
160 161 1.160137 GAGCTCGTGGCAAGAAACAT 58.840 50.000 4.37 0.00 44.79 2.71
161 162 2.346803 GAGCTCGTGGCAAGAAACATA 58.653 47.619 4.37 0.00 44.79 2.29
162 163 2.742053 GAGCTCGTGGCAAGAAACATAA 59.258 45.455 4.37 0.00 44.79 1.90
163 164 3.146066 AGCTCGTGGCAAGAAACATAAA 58.854 40.909 4.37 0.00 44.79 1.40
164 165 3.568007 AGCTCGTGGCAAGAAACATAAAA 59.432 39.130 4.37 0.00 44.79 1.52
165 166 4.218417 AGCTCGTGGCAAGAAACATAAAAT 59.782 37.500 4.37 0.00 44.79 1.82
166 167 4.923281 GCTCGTGGCAAGAAACATAAAATT 59.077 37.500 4.37 0.00 41.35 1.82
167 168 5.060940 GCTCGTGGCAAGAAACATAAAATTC 59.939 40.000 4.37 0.00 41.35 2.17
168 169 6.078202 TCGTGGCAAGAAACATAAAATTCA 57.922 33.333 0.00 0.00 0.00 2.57
169 170 6.148948 TCGTGGCAAGAAACATAAAATTCAG 58.851 36.000 0.00 0.00 0.00 3.02
170 171 5.345741 CGTGGCAAGAAACATAAAATTCAGG 59.654 40.000 0.00 0.00 0.00 3.86
171 172 5.120674 GTGGCAAGAAACATAAAATTCAGGC 59.879 40.000 0.00 0.00 0.00 4.85
172 173 5.221601 TGGCAAGAAACATAAAATTCAGGCA 60.222 36.000 0.00 0.00 36.66 4.75
173 174 5.876460 GGCAAGAAACATAAAATTCAGGCAT 59.124 36.000 0.00 0.00 32.15 4.40
174 175 6.183360 GGCAAGAAACATAAAATTCAGGCATG 60.183 38.462 0.00 0.00 32.15 4.06
175 176 6.369615 GCAAGAAACATAAAATTCAGGCATGT 59.630 34.615 0.00 0.00 31.39 3.21
176 177 7.622672 GCAAGAAACATAAAATTCAGGCATGTG 60.623 37.037 0.00 0.00 30.55 3.21
177 178 7.230849 AGAAACATAAAATTCAGGCATGTGA 57.769 32.000 0.00 0.00 30.55 3.58
178 179 7.318141 AGAAACATAAAATTCAGGCATGTGAG 58.682 34.615 0.00 0.00 30.55 3.51
179 180 6.839124 AACATAAAATTCAGGCATGTGAGA 57.161 33.333 0.00 0.00 30.55 3.27
180 181 6.839124 ACATAAAATTCAGGCATGTGAGAA 57.161 33.333 0.00 0.00 0.00 2.87
181 182 7.230849 ACATAAAATTCAGGCATGTGAGAAA 57.769 32.000 0.00 0.00 0.00 2.52
182 183 7.318141 ACATAAAATTCAGGCATGTGAGAAAG 58.682 34.615 0.00 0.00 0.00 2.62
183 184 5.796424 AAAATTCAGGCATGTGAGAAAGT 57.204 34.783 0.00 0.00 0.00 2.66
184 185 5.796424 AAATTCAGGCATGTGAGAAAGTT 57.204 34.783 0.00 0.00 0.00 2.66
185 186 5.796424 AATTCAGGCATGTGAGAAAGTTT 57.204 34.783 0.00 0.00 0.00 2.66
186 187 6.899393 AATTCAGGCATGTGAGAAAGTTTA 57.101 33.333 0.00 0.00 0.00 2.01
187 188 6.899393 ATTCAGGCATGTGAGAAAGTTTAA 57.101 33.333 0.00 0.00 0.00 1.52
188 189 6.707440 TTCAGGCATGTGAGAAAGTTTAAA 57.293 33.333 0.00 0.00 0.00 1.52
189 190 6.707440 TCAGGCATGTGAGAAAGTTTAAAA 57.293 33.333 0.00 0.00 0.00 1.52
190 191 6.738114 TCAGGCATGTGAGAAAGTTTAAAAG 58.262 36.000 0.00 0.00 0.00 2.27
191 192 6.545666 TCAGGCATGTGAGAAAGTTTAAAAGA 59.454 34.615 0.00 0.00 0.00 2.52
192 193 7.068103 TCAGGCATGTGAGAAAGTTTAAAAGAA 59.932 33.333 0.00 0.00 0.00 2.52
193 194 7.706179 CAGGCATGTGAGAAAGTTTAAAAGAAA 59.294 33.333 0.00 0.00 0.00 2.52
194 195 8.257306 AGGCATGTGAGAAAGTTTAAAAGAAAA 58.743 29.630 0.00 0.00 0.00 2.29
195 196 8.328146 GGCATGTGAGAAAGTTTAAAAGAAAAC 58.672 33.333 0.00 0.00 39.22 2.43
196 197 8.328146 GCATGTGAGAAAGTTTAAAAGAAAACC 58.672 33.333 0.00 0.00 39.66 3.27
197 198 9.364989 CATGTGAGAAAGTTTAAAAGAAAACCA 57.635 29.630 0.00 0.00 39.66 3.67
199 200 9.936759 TGTGAGAAAGTTTAAAAGAAAACCATT 57.063 25.926 0.00 0.00 39.66 3.16
201 202 9.296400 TGAGAAAGTTTAAAAGAAAACCATTCG 57.704 29.630 0.00 0.00 39.66 3.34
202 203 9.297586 GAGAAAGTTTAAAAGAAAACCATTCGT 57.702 29.630 0.00 0.00 39.66 3.85
203 204 9.083080 AGAAAGTTTAAAAGAAAACCATTCGTG 57.917 29.630 0.00 0.00 39.66 4.35
204 205 7.764695 AAGTTTAAAAGAAAACCATTCGTGG 57.235 32.000 0.00 0.00 39.66 4.94
205 206 6.869695 AGTTTAAAAGAAAACCATTCGTGGT 58.130 32.000 0.00 0.00 45.55 4.16
206 207 7.998580 AGTTTAAAAGAAAACCATTCGTGGTA 58.001 30.769 0.00 0.00 42.20 3.25
207 208 8.468399 AGTTTAAAAGAAAACCATTCGTGGTAA 58.532 29.630 0.00 0.00 42.20 2.85
208 209 8.748582 GTTTAAAAGAAAACCATTCGTGGTAAG 58.251 33.333 0.00 0.00 42.20 2.34
209 210 6.702716 AAAAGAAAACCATTCGTGGTAAGA 57.297 33.333 0.00 0.00 42.20 2.10
210 211 6.702716 AAAGAAAACCATTCGTGGTAAGAA 57.297 33.333 0.00 0.00 42.20 2.52
211 212 6.702716 AAGAAAACCATTCGTGGTAAGAAA 57.297 33.333 0.00 0.00 42.20 2.52
212 213 6.313744 AGAAAACCATTCGTGGTAAGAAAG 57.686 37.500 0.00 0.00 42.20 2.62
213 214 6.059484 AGAAAACCATTCGTGGTAAGAAAGA 58.941 36.000 0.00 0.00 42.20 2.52
214 215 6.715264 AGAAAACCATTCGTGGTAAGAAAGAT 59.285 34.615 0.00 0.00 42.20 2.40
215 216 7.881232 AGAAAACCATTCGTGGTAAGAAAGATA 59.119 33.333 0.00 0.00 42.20 1.98
216 217 7.989416 AAACCATTCGTGGTAAGAAAGATAA 57.011 32.000 0.00 0.00 42.20 1.75
217 218 7.989416 AACCATTCGTGGTAAGAAAGATAAA 57.011 32.000 0.00 0.00 42.20 1.40
218 219 7.989416 ACCATTCGTGGTAAGAAAGATAAAA 57.011 32.000 0.00 0.00 41.04 1.52
219 220 8.575649 ACCATTCGTGGTAAGAAAGATAAAAT 57.424 30.769 0.00 0.00 41.04 1.82
220 221 9.020731 ACCATTCGTGGTAAGAAAGATAAAATT 57.979 29.630 0.00 0.00 41.04 1.82
221 222 9.503427 CCATTCGTGGTAAGAAAGATAAAATTC 57.497 33.333 0.00 0.00 0.00 2.17
224 225 8.263940 TCGTGGTAAGAAAGATAAAATTCTGG 57.736 34.615 0.00 0.00 36.09 3.86
225 226 6.967199 CGTGGTAAGAAAGATAAAATTCTGGC 59.033 38.462 0.00 0.00 36.09 4.85
226 227 6.967199 GTGGTAAGAAAGATAAAATTCTGGCG 59.033 38.462 0.00 0.00 36.09 5.69
227 228 6.882140 TGGTAAGAAAGATAAAATTCTGGCGA 59.118 34.615 0.00 0.00 36.09 5.54
228 229 7.065803 TGGTAAGAAAGATAAAATTCTGGCGAG 59.934 37.037 0.00 0.00 36.09 5.03
229 230 6.442513 AAGAAAGATAAAATTCTGGCGAGG 57.557 37.500 0.00 0.00 36.09 4.63
230 231 4.884164 AGAAAGATAAAATTCTGGCGAGGG 59.116 41.667 0.00 0.00 34.70 4.30
231 232 4.503714 AAGATAAAATTCTGGCGAGGGA 57.496 40.909 0.00 0.00 0.00 4.20
232 233 4.078639 AGATAAAATTCTGGCGAGGGAG 57.921 45.455 0.00 0.00 0.00 4.30
233 234 3.711704 AGATAAAATTCTGGCGAGGGAGA 59.288 43.478 0.00 0.00 0.00 3.71
234 235 2.409948 AAAATTCTGGCGAGGGAGAG 57.590 50.000 0.00 0.00 0.00 3.20
235 236 0.543749 AAATTCTGGCGAGGGAGAGG 59.456 55.000 0.00 0.00 0.00 3.69
236 237 1.977293 AATTCTGGCGAGGGAGAGGC 61.977 60.000 0.00 0.00 0.00 4.70
242 243 3.827898 CGAGGGAGAGGCGGTGAC 61.828 72.222 0.00 0.00 0.00 3.67
265 266 2.740055 CGCACCTTCAGCTCGCTT 60.740 61.111 0.00 0.00 0.00 4.68
266 267 2.734673 CGCACCTTCAGCTCGCTTC 61.735 63.158 0.00 0.00 0.00 3.86
267 268 1.669115 GCACCTTCAGCTCGCTTCA 60.669 57.895 0.00 0.00 0.00 3.02
268 269 1.633852 GCACCTTCAGCTCGCTTCAG 61.634 60.000 0.00 0.00 0.00 3.02
269 270 0.320247 CACCTTCAGCTCGCTTCAGT 60.320 55.000 0.00 0.00 0.00 3.41
270 271 0.320247 ACCTTCAGCTCGCTTCAGTG 60.320 55.000 0.00 0.00 0.00 3.66
271 272 0.037882 CCTTCAGCTCGCTTCAGTGA 60.038 55.000 0.00 0.00 0.00 3.41
272 273 1.405256 CCTTCAGCTCGCTTCAGTGAT 60.405 52.381 0.00 0.00 33.67 3.06
273 274 1.659601 CTTCAGCTCGCTTCAGTGATG 59.340 52.381 0.00 0.00 33.67 3.07
274 275 0.890683 TCAGCTCGCTTCAGTGATGA 59.109 50.000 10.08 0.00 33.67 2.92
275 276 0.997932 CAGCTCGCTTCAGTGATGAC 59.002 55.000 10.08 1.21 33.67 3.06
276 277 0.605083 AGCTCGCTTCAGTGATGACA 59.395 50.000 10.08 0.00 33.67 3.58
277 278 0.997932 GCTCGCTTCAGTGATGACAG 59.002 55.000 10.08 5.49 33.67 3.51
278 279 1.671261 GCTCGCTTCAGTGATGACAGT 60.671 52.381 10.08 0.00 33.67 3.55
279 280 2.257894 CTCGCTTCAGTGATGACAGTC 58.742 52.381 10.08 0.00 33.67 3.51
280 281 0.987715 CGCTTCAGTGATGACAGTCG 59.012 55.000 10.08 2.03 0.00 4.18
281 282 1.667177 CGCTTCAGTGATGACAGTCGT 60.667 52.381 10.08 0.00 0.00 4.34
282 283 1.989165 GCTTCAGTGATGACAGTCGTC 59.011 52.381 15.06 15.06 42.93 4.20
283 284 2.245942 CTTCAGTGATGACAGTCGTCG 58.754 52.381 16.51 4.42 45.80 5.12
284 285 0.109735 TCAGTGATGACAGTCGTCGC 60.110 55.000 23.66 23.66 45.80 5.19
285 286 2.258317 AGTGATGACAGTCGTCGCT 58.742 52.632 26.80 26.80 45.45 4.93
286 287 3.990546 GTGATGACAGTCGTCGCTA 57.009 52.632 23.76 3.53 45.80 4.26
287 288 1.816370 GTGATGACAGTCGTCGCTAG 58.184 55.000 23.76 0.00 45.80 3.42
288 289 0.733150 TGATGACAGTCGTCGCTAGG 59.267 55.000 16.51 0.00 45.80 3.02
289 290 0.733729 GATGACAGTCGTCGCTAGGT 59.266 55.000 7.03 0.00 45.80 3.08
290 291 0.452184 ATGACAGTCGTCGCTAGGTG 59.548 55.000 0.00 0.00 45.80 4.00
291 292 1.136984 GACAGTCGTCGCTAGGTGG 59.863 63.158 0.00 0.00 31.07 4.61
292 293 1.584380 GACAGTCGTCGCTAGGTGGT 61.584 60.000 0.00 0.00 31.07 4.16
293 294 1.136984 CAGTCGTCGCTAGGTGGTC 59.863 63.158 0.00 0.00 0.00 4.02
294 295 1.002379 AGTCGTCGCTAGGTGGTCT 60.002 57.895 0.00 0.00 0.00 3.85
295 296 0.251354 AGTCGTCGCTAGGTGGTCTA 59.749 55.000 0.00 0.00 0.00 2.59
296 297 0.376502 GTCGTCGCTAGGTGGTCTAC 59.623 60.000 0.00 0.00 0.00 2.59
297 298 1.086067 TCGTCGCTAGGTGGTCTACG 61.086 60.000 0.00 0.00 0.00 3.51
298 299 1.726265 GTCGCTAGGTGGTCTACGG 59.274 63.158 0.00 0.00 0.00 4.02
299 300 0.745845 GTCGCTAGGTGGTCTACGGA 60.746 60.000 0.00 0.00 0.00 4.69
300 301 0.182061 TCGCTAGGTGGTCTACGGAT 59.818 55.000 0.00 0.00 0.00 4.18
301 302 0.592148 CGCTAGGTGGTCTACGGATC 59.408 60.000 0.00 0.00 0.00 3.36
302 303 1.814634 CGCTAGGTGGTCTACGGATCT 60.815 57.143 0.00 0.00 0.00 2.75
303 304 1.609555 GCTAGGTGGTCTACGGATCTG 59.390 57.143 0.00 0.00 0.00 2.90
304 305 2.231529 CTAGGTGGTCTACGGATCTGG 58.768 57.143 6.47 0.00 0.00 3.86
305 306 0.629596 AGGTGGTCTACGGATCTGGA 59.370 55.000 6.47 0.00 0.00 3.86
306 307 1.218196 AGGTGGTCTACGGATCTGGAT 59.782 52.381 6.47 0.00 0.00 3.41
307 308 1.341531 GGTGGTCTACGGATCTGGATG 59.658 57.143 6.47 0.00 0.00 3.51
308 309 2.032620 GTGGTCTACGGATCTGGATGT 58.967 52.381 6.47 0.00 0.00 3.06
309 310 3.220110 GTGGTCTACGGATCTGGATGTA 58.780 50.000 6.47 0.00 0.00 2.29
310 311 3.635373 GTGGTCTACGGATCTGGATGTAA 59.365 47.826 6.47 0.00 0.00 2.41
311 312 4.281182 GTGGTCTACGGATCTGGATGTAAT 59.719 45.833 6.47 0.00 0.00 1.89
312 313 4.899457 TGGTCTACGGATCTGGATGTAATT 59.101 41.667 6.47 0.00 0.00 1.40
313 314 5.365605 TGGTCTACGGATCTGGATGTAATTT 59.634 40.000 6.47 0.00 0.00 1.82
314 315 6.126883 TGGTCTACGGATCTGGATGTAATTTT 60.127 38.462 6.47 0.00 0.00 1.82
315 316 6.766467 GGTCTACGGATCTGGATGTAATTTTT 59.234 38.462 6.47 0.00 0.00 1.94
316 317 7.929785 GGTCTACGGATCTGGATGTAATTTTTA 59.070 37.037 6.47 0.00 0.00 1.52
317 318 9.490379 GTCTACGGATCTGGATGTAATTTTTAT 57.510 33.333 6.47 0.00 0.00 1.40
345 346 8.763049 TTTCTGATGTTCTTAGTACTGTCATG 57.237 34.615 5.39 0.00 0.00 3.07
346 347 7.703058 TCTGATGTTCTTAGTACTGTCATGA 57.297 36.000 5.39 0.00 0.00 3.07
347 348 8.298729 TCTGATGTTCTTAGTACTGTCATGAT 57.701 34.615 5.39 0.00 0.00 2.45
348 349 8.753133 TCTGATGTTCTTAGTACTGTCATGATT 58.247 33.333 5.39 0.00 0.00 2.57
349 350 8.707938 TGATGTTCTTAGTACTGTCATGATTG 57.292 34.615 5.39 0.00 0.00 2.67
350 351 8.314021 TGATGTTCTTAGTACTGTCATGATTGT 58.686 33.333 5.39 3.69 0.00 2.71
351 352 9.803315 GATGTTCTTAGTACTGTCATGATTGTA 57.197 33.333 5.39 2.65 0.00 2.41
353 354 9.990360 TGTTCTTAGTACTGTCATGATTGTAAA 57.010 29.630 5.39 0.00 0.00 2.01
401 402 1.749153 AAAATGTTCGGTTGTTCGCG 58.251 45.000 0.00 0.00 0.00 5.87
402 403 0.658897 AAATGTTCGGTTGTTCGCGT 59.341 45.000 5.77 0.00 0.00 6.01
403 404 1.500108 AATGTTCGGTTGTTCGCGTA 58.500 45.000 5.77 0.00 0.00 4.42
404 405 0.785979 ATGTTCGGTTGTTCGCGTAC 59.214 50.000 9.12 9.12 0.00 3.67
405 406 0.527169 TGTTCGGTTGTTCGCGTACA 60.527 50.000 14.93 14.93 0.00 2.90
406 407 0.111574 GTTCGGTTGTTCGCGTACAC 60.112 55.000 18.56 12.86 0.00 2.90
407 408 0.248990 TTCGGTTGTTCGCGTACACT 60.249 50.000 18.56 0.00 0.00 3.55
408 409 0.661187 TCGGTTGTTCGCGTACACTC 60.661 55.000 18.56 13.65 0.00 3.51
409 410 1.611592 CGGTTGTTCGCGTACACTCC 61.612 60.000 18.56 20.06 0.00 3.85
410 411 0.319297 GGTTGTTCGCGTACACTCCT 60.319 55.000 18.56 0.00 0.00 3.69
411 412 1.058404 GTTGTTCGCGTACACTCCTC 58.942 55.000 18.56 3.70 0.00 3.71
412 413 0.669619 TTGTTCGCGTACACTCCTCA 59.330 50.000 18.56 0.00 0.00 3.86
413 414 0.669619 TGTTCGCGTACACTCCTCAA 59.330 50.000 14.93 0.00 0.00 3.02
414 415 1.058404 GTTCGCGTACACTCCTCAAC 58.942 55.000 11.25 0.00 0.00 3.18
415 416 0.956633 TTCGCGTACACTCCTCAACT 59.043 50.000 5.77 0.00 0.00 3.16
416 417 1.812235 TCGCGTACACTCCTCAACTA 58.188 50.000 5.77 0.00 0.00 2.24
417 418 1.466167 TCGCGTACACTCCTCAACTAC 59.534 52.381 5.77 0.00 0.00 2.73
418 419 1.467035 CGCGTACACTCCTCAACTACC 60.467 57.143 0.00 0.00 0.00 3.18
419 420 1.135170 GCGTACACTCCTCAACTACCC 60.135 57.143 0.00 0.00 0.00 3.69
420 421 1.475682 CGTACACTCCTCAACTACCCC 59.524 57.143 0.00 0.00 0.00 4.95
421 422 2.532843 GTACACTCCTCAACTACCCCA 58.467 52.381 0.00 0.00 0.00 4.96
422 423 1.645710 ACACTCCTCAACTACCCCAG 58.354 55.000 0.00 0.00 0.00 4.45
423 424 1.132817 ACACTCCTCAACTACCCCAGT 60.133 52.381 0.00 0.00 40.05 4.00
425 426 3.170717 CACTCCTCAACTACCCCAGTTA 58.829 50.000 0.00 0.00 46.04 2.24
426 427 3.056035 CACTCCTCAACTACCCCAGTTAC 60.056 52.174 0.00 0.00 46.04 2.50
427 428 3.170717 CTCCTCAACTACCCCAGTTACA 58.829 50.000 0.00 0.00 46.04 2.41
428 429 3.581332 CTCCTCAACTACCCCAGTTACAA 59.419 47.826 0.00 0.00 46.04 2.41
429 430 3.975312 TCCTCAACTACCCCAGTTACAAA 59.025 43.478 0.00 0.00 46.04 2.83
430 431 4.600111 TCCTCAACTACCCCAGTTACAAAT 59.400 41.667 0.00 0.00 46.04 2.32
431 432 5.786457 TCCTCAACTACCCCAGTTACAAATA 59.214 40.000 0.00 0.00 46.04 1.40
432 433 6.070424 TCCTCAACTACCCCAGTTACAAATAG 60.070 42.308 0.00 0.00 46.04 1.73
433 434 5.493809 TCAACTACCCCAGTTACAAATAGC 58.506 41.667 0.00 0.00 46.04 2.97
434 435 5.013287 TCAACTACCCCAGTTACAAATAGCA 59.987 40.000 0.00 0.00 46.04 3.49
435 436 4.840271 ACTACCCCAGTTACAAATAGCAC 58.160 43.478 0.00 0.00 31.59 4.40
436 437 4.534897 ACTACCCCAGTTACAAATAGCACT 59.465 41.667 0.00 0.00 31.59 4.40
437 438 5.722923 ACTACCCCAGTTACAAATAGCACTA 59.277 40.000 0.00 0.00 31.59 2.74
438 439 5.508280 ACCCCAGTTACAAATAGCACTAA 57.492 39.130 0.00 0.00 0.00 2.24
439 440 5.883180 ACCCCAGTTACAAATAGCACTAAA 58.117 37.500 0.00 0.00 0.00 1.85
440 441 6.308566 ACCCCAGTTACAAATAGCACTAAAA 58.691 36.000 0.00 0.00 0.00 1.52
441 442 6.951778 ACCCCAGTTACAAATAGCACTAAAAT 59.048 34.615 0.00 0.00 0.00 1.82
442 443 7.453439 ACCCCAGTTACAAATAGCACTAAAATT 59.547 33.333 0.00 0.00 0.00 1.82
443 444 7.973944 CCCCAGTTACAAATAGCACTAAAATTC 59.026 37.037 0.00 0.00 0.00 2.17
444 445 8.739972 CCCAGTTACAAATAGCACTAAAATTCT 58.260 33.333 0.00 0.00 0.00 2.40
455 456 9.833917 ATAGCACTAAAATTCTAAACTACTCCC 57.166 33.333 0.00 0.00 0.00 4.30
456 457 7.919151 AGCACTAAAATTCTAAACTACTCCCT 58.081 34.615 0.00 0.00 0.00 4.20
457 458 8.041919 AGCACTAAAATTCTAAACTACTCCCTC 58.958 37.037 0.00 0.00 0.00 4.30
458 459 7.280428 GCACTAAAATTCTAAACTACTCCCTCC 59.720 40.741 0.00 0.00 0.00 4.30
459 460 7.491696 CACTAAAATTCTAAACTACTCCCTCCG 59.508 40.741 0.00 0.00 0.00 4.63
460 461 6.370186 AAAATTCTAAACTACTCCCTCCGT 57.630 37.500 0.00 0.00 0.00 4.69
461 462 5.595257 AATTCTAAACTACTCCCTCCGTC 57.405 43.478 0.00 0.00 0.00 4.79
462 463 3.010200 TCTAAACTACTCCCTCCGTCC 57.990 52.381 0.00 0.00 0.00 4.79
463 464 2.030371 CTAAACTACTCCCTCCGTCCC 58.970 57.143 0.00 0.00 0.00 4.46
464 465 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
465 466 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
466 467 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
467 468 1.787676 ACTACTCCCTCCGTCCCATAT 59.212 52.381 0.00 0.00 0.00 1.78
468 469 2.179424 ACTACTCCCTCCGTCCCATATT 59.821 50.000 0.00 0.00 0.00 1.28
469 470 1.424638 ACTCCCTCCGTCCCATATTG 58.575 55.000 0.00 0.00 0.00 1.90
470 471 1.344087 ACTCCCTCCGTCCCATATTGT 60.344 52.381 0.00 0.00 0.00 2.71
471 472 2.090943 ACTCCCTCCGTCCCATATTGTA 60.091 50.000 0.00 0.00 0.00 2.41
472 473 2.969950 CTCCCTCCGTCCCATATTGTAA 59.030 50.000 0.00 0.00 0.00 2.41
473 474 2.969950 TCCCTCCGTCCCATATTGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
474 475 2.969950 CCCTCCGTCCCATATTGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
475 476 3.244112 CCCTCCGTCCCATATTGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
477 478 2.132762 CCGTCCCATATTGTAAGACGC 58.867 52.381 5.39 0.00 46.66 5.19
478 479 2.223971 CCGTCCCATATTGTAAGACGCT 60.224 50.000 5.39 0.00 46.66 5.07
479 480 3.454375 CGTCCCATATTGTAAGACGCTT 58.546 45.455 0.00 0.00 43.07 4.68
480 481 3.869246 CGTCCCATATTGTAAGACGCTTT 59.131 43.478 0.00 0.00 43.07 3.51
481 482 4.331717 CGTCCCATATTGTAAGACGCTTTT 59.668 41.667 0.00 0.00 43.07 2.27
482 483 5.163794 CGTCCCATATTGTAAGACGCTTTTT 60.164 40.000 0.00 0.00 43.07 1.94
483 484 6.027749 GTCCCATATTGTAAGACGCTTTTTG 58.972 40.000 0.00 0.00 0.00 2.44
484 485 5.941058 TCCCATATTGTAAGACGCTTTTTGA 59.059 36.000 0.00 0.00 0.00 2.69
485 486 6.027749 CCCATATTGTAAGACGCTTTTTGAC 58.972 40.000 0.00 0.00 0.00 3.18
486 487 6.348950 CCCATATTGTAAGACGCTTTTTGACA 60.349 38.462 0.00 0.00 0.00 3.58
487 488 7.250569 CCATATTGTAAGACGCTTTTTGACAT 58.749 34.615 0.00 0.00 0.00 3.06
488 489 7.754924 CCATATTGTAAGACGCTTTTTGACATT 59.245 33.333 0.00 0.00 0.00 2.71
489 490 6.991485 ATTGTAAGACGCTTTTTGACATTG 57.009 33.333 0.00 0.00 0.00 2.82
490 491 5.493133 TGTAAGACGCTTTTTGACATTGT 57.507 34.783 0.00 0.00 0.00 2.71
491 492 6.606234 TGTAAGACGCTTTTTGACATTGTA 57.394 33.333 0.00 0.00 0.00 2.41
492 493 6.655062 TGTAAGACGCTTTTTGACATTGTAG 58.345 36.000 0.00 0.00 0.00 2.74
493 494 5.751243 AAGACGCTTTTTGACATTGTAGT 57.249 34.783 0.00 0.00 0.00 2.73
494 495 5.095691 AGACGCTTTTTGACATTGTAGTG 57.904 39.130 0.00 0.00 0.00 2.74
495 496 4.574828 AGACGCTTTTTGACATTGTAGTGT 59.425 37.500 3.09 3.09 34.39 3.55
496 497 5.065988 AGACGCTTTTTGACATTGTAGTGTT 59.934 36.000 4.67 0.00 31.16 3.32
497 498 6.259167 AGACGCTTTTTGACATTGTAGTGTTA 59.741 34.615 4.67 0.00 31.16 2.41
498 499 6.196571 ACGCTTTTTGACATTGTAGTGTTAC 58.803 36.000 0.00 0.00 31.16 2.50
499 500 6.183360 ACGCTTTTTGACATTGTAGTGTTACA 60.183 34.615 0.00 0.00 38.00 2.41
522 523 8.391075 ACAAAACATCTTATATTATGGGACGG 57.609 34.615 0.00 0.00 0.00 4.79
523 524 8.215050 ACAAAACATCTTATATTATGGGACGGA 58.785 33.333 0.00 0.00 0.00 4.69
524 525 8.721478 CAAAACATCTTATATTATGGGACGGAG 58.279 37.037 0.00 0.00 0.00 4.63
525 526 6.546428 ACATCTTATATTATGGGACGGAGG 57.454 41.667 0.00 0.00 0.00 4.30
526 527 5.425539 ACATCTTATATTATGGGACGGAGGG 59.574 44.000 0.00 0.00 0.00 4.30
527 528 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
528 529 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
529 530 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
530 531 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
531 532 2.077687 TTATGGGACGGAGGGAGTAC 57.922 55.000 0.00 0.00 0.00 2.73
532 533 0.928505 TATGGGACGGAGGGAGTACA 59.071 55.000 0.00 0.00 0.00 2.90
533 534 0.264955 ATGGGACGGAGGGAGTACAT 59.735 55.000 0.00 0.00 0.00 2.29
534 535 0.042131 TGGGACGGAGGGAGTACATT 59.958 55.000 0.00 0.00 0.00 2.71
535 536 0.751452 GGGACGGAGGGAGTACATTC 59.249 60.000 0.00 0.00 0.00 2.67
536 537 0.751452 GGACGGAGGGAGTACATTCC 59.249 60.000 0.00 0.00 36.46 3.01
537 538 1.688627 GGACGGAGGGAGTACATTCCT 60.689 57.143 0.00 0.00 37.40 3.36
538 539 1.682323 GACGGAGGGAGTACATTCCTC 59.318 57.143 16.22 16.22 44.64 3.71
539 540 1.288335 ACGGAGGGAGTACATTCCTCT 59.712 52.381 20.81 9.32 44.72 3.69
540 541 1.957877 CGGAGGGAGTACATTCCTCTC 59.042 57.143 20.81 15.05 44.72 3.20
541 542 2.687014 CGGAGGGAGTACATTCCTCTCA 60.687 54.545 20.81 0.00 44.72 3.27
542 543 3.375699 GGAGGGAGTACATTCCTCTCAA 58.624 50.000 20.81 0.00 44.72 3.02
543 544 3.970640 GGAGGGAGTACATTCCTCTCAAT 59.029 47.826 20.81 0.00 44.72 2.57
544 545 5.148502 GGAGGGAGTACATTCCTCTCAATA 58.851 45.833 20.81 0.00 44.72 1.90
545 546 5.602978 GGAGGGAGTACATTCCTCTCAATAA 59.397 44.000 20.81 0.00 44.72 1.40
546 547 6.271159 GGAGGGAGTACATTCCTCTCAATAAT 59.729 42.308 20.81 0.00 44.72 1.28
547 548 7.455008 GGAGGGAGTACATTCCTCTCAATAATA 59.545 40.741 20.81 0.00 44.72 0.98
548 549 8.798975 AGGGAGTACATTCCTCTCAATAATAA 57.201 34.615 0.00 0.00 37.40 1.40
596 597 2.964925 GAAGTGTGCCGTGCGTGA 60.965 61.111 0.00 0.00 0.00 4.35
703 718 2.289694 CGATATGATCCTCCCACCCAAC 60.290 54.545 0.00 0.00 0.00 3.77
741 761 4.217118 CCAGAAACACTTGGAAATCCTGAG 59.783 45.833 0.44 1.97 36.82 3.35
772 792 5.111293 CGCCATTTTTCTATCATTTTGCCT 58.889 37.500 0.00 0.00 0.00 4.75
787 815 2.759973 CCTAGGCAGCCCGACAGA 60.760 66.667 8.22 0.00 35.76 3.41
792 820 4.459089 GCAGCCCGACAGAGTCCC 62.459 72.222 0.00 0.00 0.00 4.46
800 828 3.665675 GACAGAGTCCCGCGCCAAT 62.666 63.158 0.00 0.00 0.00 3.16
920 1536 1.945819 GCACCATGTCCAATCACGACT 60.946 52.381 0.00 0.00 0.00 4.18
921 1537 2.002586 CACCATGTCCAATCACGACTC 58.997 52.381 0.00 0.00 0.00 3.36
1192 1851 1.209019 CCACCTTCTACTGCATGCTCT 59.791 52.381 20.33 6.07 0.00 4.09
1214 1876 5.185249 TCTTCCTGGTCAGTACACACTTATC 59.815 44.000 0.00 0.00 30.46 1.75
1219 1881 6.121776 TGGTCAGTACACACTTATCCATTT 57.878 37.500 0.00 0.00 30.46 2.32
1240 1917 4.351874 TCCCCTGTTTGACTTTGAGTAG 57.648 45.455 0.00 0.00 0.00 2.57
1245 1922 5.297547 CCTGTTTGACTTTGAGTAGCACTA 58.702 41.667 0.00 0.00 0.00 2.74
1310 2002 7.559590 ACTGTGGCTAAATATTCAGCTTAAG 57.440 36.000 10.46 7.71 37.91 1.85
1311 2003 7.112779 ACTGTGGCTAAATATTCAGCTTAAGT 58.887 34.615 10.46 8.26 37.91 2.24
1314 2006 7.393234 TGTGGCTAAATATTCAGCTTAAGTTGT 59.607 33.333 17.56 3.78 37.91 3.32
1328 2020 5.569059 GCTTAAGTTGTTCAATCGATTGGTG 59.431 40.000 32.03 13.18 38.30 4.17
1476 2177 1.739929 CGATGGCGGCAACTACACA 60.740 57.895 18.31 0.00 0.00 3.72
1503 2204 2.821366 CTGGGCGAGCGATGCTTT 60.821 61.111 0.00 0.00 39.88 3.51
1545 2246 1.179174 CGGAGGCCATCATCGTCCTA 61.179 60.000 5.01 0.00 36.60 2.94
1884 2585 2.435059 GGGTTCTGCCTCACGCTC 60.435 66.667 0.00 0.00 38.78 5.03
2313 3017 4.687215 TGCGCGCTGCTCTCCTTT 62.687 61.111 33.29 0.00 46.63 3.11
2505 3228 0.658536 GCGCACACACAAAAGAGAGC 60.659 55.000 0.30 0.00 0.00 4.09
2508 3231 2.287188 CGCACACACAAAAGAGAGCAAT 60.287 45.455 0.00 0.00 0.00 3.56
2509 3232 3.303406 GCACACACAAAAGAGAGCAATC 58.697 45.455 0.00 0.00 0.00 2.67
2522 3246 5.674525 AGAGAGCAATCACCATCGAAATTA 58.325 37.500 0.00 0.00 0.00 1.40
2523 3247 5.525378 AGAGAGCAATCACCATCGAAATTAC 59.475 40.000 0.00 0.00 0.00 1.89
2541 3269 2.418368 ACAGTCAACAAAGACCTGCA 57.582 45.000 0.00 0.00 39.34 4.41
2549 3277 3.525268 ACAAAGACCTGCAAAAACCAG 57.475 42.857 0.00 0.00 0.00 4.00
2553 3281 3.515602 AGACCTGCAAAAACCAGAGAT 57.484 42.857 0.00 0.00 32.03 2.75
2555 3283 2.154462 ACCTGCAAAAACCAGAGATCG 58.846 47.619 0.00 0.00 32.03 3.69
2583 3311 3.518998 CATCTCCGACGCCGACCT 61.519 66.667 0.00 0.00 38.22 3.85
2584 3312 2.754658 ATCTCCGACGCCGACCTT 60.755 61.111 0.00 0.00 38.22 3.50
2585 3313 3.064987 ATCTCCGACGCCGACCTTG 62.065 63.158 0.00 0.00 38.22 3.61
2586 3314 3.744719 CTCCGACGCCGACCTTGA 61.745 66.667 0.00 0.00 38.22 3.02
2587 3315 3.277211 CTCCGACGCCGACCTTGAA 62.277 63.158 0.00 0.00 38.22 2.69
2588 3316 2.356553 CCGACGCCGACCTTGAAA 60.357 61.111 0.00 0.00 38.22 2.69
2589 3317 1.957186 CCGACGCCGACCTTGAAAA 60.957 57.895 0.00 0.00 38.22 2.29
2590 3318 1.203313 CGACGCCGACCTTGAAAAC 59.797 57.895 0.00 0.00 38.22 2.43
2591 3319 1.203313 GACGCCGACCTTGAAAACG 59.797 57.895 0.00 0.00 0.00 3.60
2592 3320 2.166584 GACGCCGACCTTGAAAACGG 62.167 60.000 0.00 0.00 46.74 4.44
2593 3321 1.957186 CGCCGACCTTGAAAACGGA 60.957 57.895 0.00 0.00 46.94 4.69
2594 3322 1.572941 GCCGACCTTGAAAACGGAC 59.427 57.895 0.00 0.00 46.94 4.79
2595 3323 1.161563 GCCGACCTTGAAAACGGACA 61.162 55.000 0.00 0.00 46.94 4.02
2596 3324 0.584876 CCGACCTTGAAAACGGACAC 59.415 55.000 0.00 0.00 46.94 3.67
2597 3325 1.292061 CGACCTTGAAAACGGACACA 58.708 50.000 0.00 0.00 0.00 3.72
2598 3326 1.260561 CGACCTTGAAAACGGACACAG 59.739 52.381 0.00 0.00 0.00 3.66
2599 3327 2.285977 GACCTTGAAAACGGACACAGT 58.714 47.619 0.00 0.00 0.00 3.55
2600 3328 3.460103 GACCTTGAAAACGGACACAGTA 58.540 45.455 0.00 0.00 0.00 2.74
2601 3329 4.062991 GACCTTGAAAACGGACACAGTAT 58.937 43.478 0.00 0.00 0.00 2.12
2602 3330 4.062991 ACCTTGAAAACGGACACAGTATC 58.937 43.478 0.00 0.00 0.00 2.24
2603 3331 3.435671 CCTTGAAAACGGACACAGTATCC 59.564 47.826 0.00 0.00 0.00 2.59
2608 3336 4.396854 GGACACAGTATCCGACGC 57.603 61.111 0.00 0.00 0.00 5.19
2609 3337 1.226888 GGACACAGTATCCGACGCC 60.227 63.158 0.00 0.00 0.00 5.68
2610 3338 1.585521 GACACAGTATCCGACGCCG 60.586 63.158 0.00 0.00 0.00 6.46
2628 3356 0.531090 CGACCTCCAAAACGGACACA 60.531 55.000 0.00 0.00 39.64 3.72
2630 3358 0.544697 ACCTCCAAAACGGACACAGT 59.455 50.000 0.00 0.00 39.64 3.55
2633 3361 3.000727 CCTCCAAAACGGACACAGTATC 58.999 50.000 0.00 0.00 39.64 2.24
2638 3366 2.579207 AACGGACACAGTATCCATCG 57.421 50.000 0.00 0.00 35.83 3.84
2640 3368 0.597637 CGGACACAGTATCCATCGCC 60.598 60.000 0.00 0.00 35.83 5.54
2644 3372 0.385751 CACAGTATCCATCGCCGTCT 59.614 55.000 0.00 0.00 0.00 4.18
2645 3373 0.385751 ACAGTATCCATCGCCGTCTG 59.614 55.000 0.00 0.00 0.00 3.51
2646 3374 0.668535 CAGTATCCATCGCCGTCTGA 59.331 55.000 0.00 0.00 0.00 3.27
2647 3375 0.669077 AGTATCCATCGCCGTCTGAC 59.331 55.000 0.00 0.00 0.00 3.51
2656 3384 4.135153 CCGTCTGACTGGGAGCCG 62.135 72.222 6.21 0.00 0.00 5.52
2667 3395 1.758122 GGGAGCCGGCCATCAAATT 60.758 57.895 26.15 0.00 0.00 1.82
2668 3396 1.735973 GGAGCCGGCCATCAAATTC 59.264 57.895 26.15 11.53 0.00 2.17
2673 3401 1.755179 CCGGCCATCAAATTCTGTCT 58.245 50.000 2.24 0.00 0.00 3.41
2676 3404 2.726821 GGCCATCAAATTCTGTCTCCA 58.273 47.619 0.00 0.00 0.00 3.86
2679 3407 4.488879 GCCATCAAATTCTGTCTCCAAAC 58.511 43.478 0.00 0.00 0.00 2.93
2680 3408 4.726416 CCATCAAATTCTGTCTCCAAACG 58.274 43.478 0.00 0.00 0.00 3.60
2681 3409 4.216257 CCATCAAATTCTGTCTCCAAACGT 59.784 41.667 0.00 0.00 0.00 3.99
2682 3410 5.385617 CATCAAATTCTGTCTCCAAACGTC 58.614 41.667 0.00 0.00 0.00 4.34
2684 3412 2.080286 ATTCTGTCTCCAAACGTCCG 57.920 50.000 0.00 0.00 0.00 4.79
2685 3413 0.748450 TTCTGTCTCCAAACGTCCGT 59.252 50.000 0.00 0.00 0.00 4.69
2687 3415 0.314302 CTGTCTCCAAACGTCCGTCT 59.686 55.000 0.00 0.00 0.00 4.18
2690 3418 0.596577 TCTCCAAACGTCCGTCTCTG 59.403 55.000 0.00 0.00 0.00 3.35
2695 3423 3.125316 CCAAACGTCCGTCTCTGTTTTA 58.875 45.455 0.00 0.00 32.58 1.52
2703 3432 6.585322 ACGTCCGTCTCTGTTTTATTTCTTAG 59.415 38.462 0.00 0.00 0.00 2.18
2725 3458 6.267496 AGGTCCACAACAAAATAATAGCAC 57.733 37.500 0.00 0.00 0.00 4.40
2727 3460 5.861787 GGTCCACAACAAAATAATAGCACAC 59.138 40.000 0.00 0.00 0.00 3.82
2728 3461 6.442952 GTCCACAACAAAATAATAGCACACA 58.557 36.000 0.00 0.00 0.00 3.72
2777 3512 2.553602 TGTGGCACTAGTTCAAATGCAG 59.446 45.455 19.83 0.00 39.92 4.41
2846 3583 9.325198 ACTTGAATTCAACTCGCATATATGTTA 57.675 29.630 16.91 2.28 0.00 2.41
2868 3605 7.877097 TGTTATAGTTGTCCCTTTTAAACGCTA 59.123 33.333 0.00 0.00 0.00 4.26
2896 3633 6.481644 AGATGCTCAATCGGATCTTTCTTAAC 59.518 38.462 0.00 0.00 38.71 2.01
2980 3718 3.009033 ACCGGATTCTGATTTGGAAGTCA 59.991 43.478 9.46 0.00 0.00 3.41
2982 3720 3.064545 CGGATTCTGATTTGGAAGTCAGC 59.935 47.826 6.95 0.00 41.21 4.26
2988 3726 2.293170 GATTTGGAAGTCAGCTAGGGC 58.707 52.381 0.00 0.00 39.06 5.19
3001 3741 1.616994 GCTAGGGCCACCAATGTTCTT 60.617 52.381 6.18 0.00 40.13 2.52
3016 3756 6.660949 CCAATGTTCTTAAATTCCAGACCTCT 59.339 38.462 0.00 0.00 0.00 3.69
3055 3796 5.185828 CCTCATCCTCCACGATCATATTGTA 59.814 44.000 0.00 0.00 0.00 2.41
3088 3829 6.002082 CACAATATGTCATCATCTCCCACAT 58.998 40.000 0.00 0.00 35.70 3.21
3106 3847 3.382546 CACATGGTCTTTGGATCCCATTC 59.617 47.826 9.90 0.00 35.53 2.67
3231 3983 7.220030 TCTTTTCTGAACAATTAGCTCAGAGT 58.780 34.615 11.16 0.00 46.80 3.24
3241 3993 7.846066 ACAATTAGCTCAGAGTTAGTCTTGAT 58.154 34.615 14.69 0.00 30.64 2.57
3245 3997 6.352016 AGCTCAGAGTTAGTCTTGATGAAA 57.648 37.500 0.00 0.00 30.64 2.69
3255 4007 1.071542 TCTTGATGAAAGTCGCCCACA 59.928 47.619 0.00 0.00 37.18 4.17
3284 4037 7.066043 GGATAGATACGTCAACCAGATAGTAGG 59.934 44.444 0.00 0.00 0.00 3.18
3311 4069 7.337689 ACATGTTGTAGTCATGCTCATTAACAT 59.662 33.333 0.00 0.00 44.26 2.71
3312 4070 7.075674 TGTTGTAGTCATGCTCATTAACATG 57.924 36.000 0.00 0.00 44.05 3.21
3326 4084 7.309012 GCTCATTAACATGATAGTTGCATGGAT 60.309 37.037 0.00 0.00 45.62 3.41
3391 4149 2.098607 CAGCACATTGATGTCATGGTCC 59.901 50.000 0.00 0.00 39.39 4.46
3415 4173 2.036217 CCTGAACATGCCAAAGAAAGCA 59.964 45.455 0.00 0.00 44.45 3.91
3427 4185 4.066490 CAAAGAAAGCATGCCAAATCCAA 58.934 39.130 15.66 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 6.048509 GGACCACAAAAACAATCAGAATGTT 58.951 36.000 0.00 0.00 42.56 2.71
61 62 5.128499 TGGACCACAAAAACAATCAGAATGT 59.872 36.000 0.00 0.00 37.40 2.71
62 63 5.599732 TGGACCACAAAAACAATCAGAATG 58.400 37.500 0.00 0.00 37.54 2.67
63 64 5.867903 TGGACCACAAAAACAATCAGAAT 57.132 34.783 0.00 0.00 0.00 2.40
64 65 5.667539 TTGGACCACAAAAACAATCAGAA 57.332 34.783 0.00 0.00 35.79 3.02
65 66 5.667539 TTTGGACCACAAAAACAATCAGA 57.332 34.783 0.00 0.00 45.59 3.27
75 76 4.826274 TTCAACCATTTTGGACCACAAA 57.174 36.364 0.00 0.00 46.82 2.83
76 77 4.163078 ACATTCAACCATTTTGGACCACAA 59.837 37.500 0.00 0.00 40.96 3.33
77 78 3.708631 ACATTCAACCATTTTGGACCACA 59.291 39.130 0.00 0.00 40.96 4.17
78 79 4.057432 CACATTCAACCATTTTGGACCAC 58.943 43.478 0.00 0.00 40.96 4.16
79 80 3.708631 ACACATTCAACCATTTTGGACCA 59.291 39.130 0.00 0.00 40.96 4.02
80 81 4.057432 CACACATTCAACCATTTTGGACC 58.943 43.478 0.00 0.00 40.96 4.46
81 82 4.942852 TCACACATTCAACCATTTTGGAC 58.057 39.130 0.00 0.00 40.96 4.02
82 83 5.539979 CATCACACATTCAACCATTTTGGA 58.460 37.500 0.00 0.00 40.96 3.53
83 84 4.152759 GCATCACACATTCAACCATTTTGG 59.847 41.667 0.00 0.00 45.02 3.28
84 85 4.152759 GGCATCACACATTCAACCATTTTG 59.847 41.667 0.00 0.00 0.00 2.44
85 86 4.317488 GGCATCACACATTCAACCATTTT 58.683 39.130 0.00 0.00 0.00 1.82
86 87 3.306919 GGGCATCACACATTCAACCATTT 60.307 43.478 0.00 0.00 0.00 2.32
87 88 2.234414 GGGCATCACACATTCAACCATT 59.766 45.455 0.00 0.00 0.00 3.16
88 89 1.826720 GGGCATCACACATTCAACCAT 59.173 47.619 0.00 0.00 0.00 3.55
89 90 1.255882 GGGCATCACACATTCAACCA 58.744 50.000 0.00 0.00 0.00 3.67
90 91 0.171007 CGGGCATCACACATTCAACC 59.829 55.000 0.00 0.00 0.00 3.77
91 92 0.881118 ACGGGCATCACACATTCAAC 59.119 50.000 0.00 0.00 0.00 3.18
92 93 0.880441 CACGGGCATCACACATTCAA 59.120 50.000 0.00 0.00 0.00 2.69
93 94 1.585267 GCACGGGCATCACACATTCA 61.585 55.000 3.77 0.00 40.72 2.57
94 95 1.137404 GCACGGGCATCACACATTC 59.863 57.895 3.77 0.00 40.72 2.67
95 96 2.342650 GGCACGGGCATCACACATT 61.343 57.895 13.89 0.00 43.71 2.71
96 97 2.751436 GGCACGGGCATCACACAT 60.751 61.111 13.89 0.00 43.71 3.21
97 98 3.781605 TTGGCACGGGCATCACACA 62.782 57.895 13.89 0.00 43.71 3.72
98 99 2.981560 CTTGGCACGGGCATCACAC 61.982 63.158 13.89 0.00 43.71 3.82
99 100 2.672651 CTTGGCACGGGCATCACA 60.673 61.111 13.89 0.00 43.71 3.58
100 101 1.805428 AAACTTGGCACGGGCATCAC 61.805 55.000 13.89 0.00 43.71 3.06
101 102 1.523154 GAAACTTGGCACGGGCATCA 61.523 55.000 13.89 0.00 43.71 3.07
102 103 1.212751 GAAACTTGGCACGGGCATC 59.787 57.895 13.89 0.00 43.71 3.91
103 104 2.625823 CGAAACTTGGCACGGGCAT 61.626 57.895 13.89 0.00 43.71 4.40
104 105 3.283684 CGAAACTTGGCACGGGCA 61.284 61.111 13.89 3.61 43.71 5.36
105 106 3.284449 ACGAAACTTGGCACGGGC 61.284 61.111 0.00 0.00 40.13 6.13
106 107 2.637025 CACGAAACTTGGCACGGG 59.363 61.111 0.00 0.00 0.00 5.28
107 108 1.841663 CTCCACGAAACTTGGCACGG 61.842 60.000 0.00 0.00 33.71 4.94
108 109 1.157870 ACTCCACGAAACTTGGCACG 61.158 55.000 0.00 0.00 33.71 5.34
109 110 1.021968 AACTCCACGAAACTTGGCAC 58.978 50.000 0.00 0.00 33.71 5.01
110 111 1.403679 CAAACTCCACGAAACTTGGCA 59.596 47.619 0.00 0.00 33.71 4.92
111 112 1.673920 TCAAACTCCACGAAACTTGGC 59.326 47.619 0.00 0.00 33.71 4.52
112 113 4.364415 TTTCAAACTCCACGAAACTTGG 57.636 40.909 0.00 0.00 35.18 3.61
113 114 6.291060 CGAATTTTCAAACTCCACGAAACTTG 60.291 38.462 0.00 0.00 0.00 3.16
114 115 5.741982 CGAATTTTCAAACTCCACGAAACTT 59.258 36.000 0.00 0.00 0.00 2.66
115 116 5.065474 TCGAATTTTCAAACTCCACGAAACT 59.935 36.000 0.00 0.00 0.00 2.66
116 117 5.267776 TCGAATTTTCAAACTCCACGAAAC 58.732 37.500 0.00 0.00 0.00 2.78
117 118 5.487153 TCGAATTTTCAAACTCCACGAAA 57.513 34.783 0.00 0.00 0.00 3.46
118 119 4.024387 CCTCGAATTTTCAAACTCCACGAA 60.024 41.667 0.00 0.00 0.00 3.85
119 120 3.496884 CCTCGAATTTTCAAACTCCACGA 59.503 43.478 0.00 0.00 0.00 4.35
120 121 3.496884 TCCTCGAATTTTCAAACTCCACG 59.503 43.478 0.00 0.00 0.00 4.94
121 122 4.613850 GCTCCTCGAATTTTCAAACTCCAC 60.614 45.833 0.00 0.00 0.00 4.02
122 123 3.502211 GCTCCTCGAATTTTCAAACTCCA 59.498 43.478 0.00 0.00 0.00 3.86
123 124 3.753797 AGCTCCTCGAATTTTCAAACTCC 59.246 43.478 0.00 0.00 0.00 3.85
124 125 4.963877 GAGCTCCTCGAATTTTCAAACTC 58.036 43.478 0.87 0.00 0.00 3.01
138 139 0.320771 TTTCTTGCCACGAGCTCCTC 60.321 55.000 8.47 0.00 44.23 3.71
139 140 0.603975 GTTTCTTGCCACGAGCTCCT 60.604 55.000 8.47 0.00 44.23 3.69
140 141 0.884704 TGTTTCTTGCCACGAGCTCC 60.885 55.000 8.47 0.00 44.23 4.70
141 142 1.160137 ATGTTTCTTGCCACGAGCTC 58.840 50.000 2.73 2.73 44.23 4.09
142 143 2.472695 TATGTTTCTTGCCACGAGCT 57.527 45.000 0.00 0.00 44.23 4.09
143 144 3.552604 TTTATGTTTCTTGCCACGAGC 57.447 42.857 0.00 0.00 44.14 5.03
144 145 6.148948 TGAATTTTATGTTTCTTGCCACGAG 58.851 36.000 0.00 0.00 0.00 4.18
145 146 6.078202 TGAATTTTATGTTTCTTGCCACGA 57.922 33.333 0.00 0.00 0.00 4.35
146 147 5.345741 CCTGAATTTTATGTTTCTTGCCACG 59.654 40.000 0.00 0.00 0.00 4.94
147 148 5.120674 GCCTGAATTTTATGTTTCTTGCCAC 59.879 40.000 0.00 0.00 0.00 5.01
148 149 5.221601 TGCCTGAATTTTATGTTTCTTGCCA 60.222 36.000 0.00 0.00 0.00 4.92
149 150 5.237048 TGCCTGAATTTTATGTTTCTTGCC 58.763 37.500 0.00 0.00 0.00 4.52
150 151 6.369615 ACATGCCTGAATTTTATGTTTCTTGC 59.630 34.615 0.00 0.00 0.00 4.01
151 152 7.599621 TCACATGCCTGAATTTTATGTTTCTTG 59.400 33.333 0.00 0.00 30.15 3.02
152 153 7.669427 TCACATGCCTGAATTTTATGTTTCTT 58.331 30.769 0.00 0.00 30.15 2.52
153 154 7.177216 TCTCACATGCCTGAATTTTATGTTTCT 59.823 33.333 0.00 0.00 30.15 2.52
154 155 7.315142 TCTCACATGCCTGAATTTTATGTTTC 58.685 34.615 0.00 0.00 30.15 2.78
155 156 7.230849 TCTCACATGCCTGAATTTTATGTTT 57.769 32.000 0.00 0.00 30.15 2.83
156 157 6.839124 TCTCACATGCCTGAATTTTATGTT 57.161 33.333 0.00 0.00 30.15 2.71
157 158 6.839124 TTCTCACATGCCTGAATTTTATGT 57.161 33.333 0.00 0.00 32.60 2.29
158 159 7.318141 ACTTTCTCACATGCCTGAATTTTATG 58.682 34.615 0.00 0.00 0.00 1.90
159 160 7.472334 ACTTTCTCACATGCCTGAATTTTAT 57.528 32.000 0.00 0.00 0.00 1.40
160 161 6.899393 ACTTTCTCACATGCCTGAATTTTA 57.101 33.333 0.00 0.00 0.00 1.52
161 162 5.796424 ACTTTCTCACATGCCTGAATTTT 57.204 34.783 0.00 0.00 0.00 1.82
162 163 5.796424 AACTTTCTCACATGCCTGAATTT 57.204 34.783 0.00 0.00 0.00 1.82
163 164 5.796424 AAACTTTCTCACATGCCTGAATT 57.204 34.783 0.00 0.00 0.00 2.17
164 165 6.899393 TTAAACTTTCTCACATGCCTGAAT 57.101 33.333 0.00 0.00 0.00 2.57
165 166 6.707440 TTTAAACTTTCTCACATGCCTGAA 57.293 33.333 0.00 0.00 0.00 3.02
166 167 6.545666 TCTTTTAAACTTTCTCACATGCCTGA 59.454 34.615 0.00 0.00 0.00 3.86
167 168 6.738114 TCTTTTAAACTTTCTCACATGCCTG 58.262 36.000 0.00 0.00 0.00 4.85
168 169 6.959639 TCTTTTAAACTTTCTCACATGCCT 57.040 33.333 0.00 0.00 0.00 4.75
169 170 8.328146 GTTTTCTTTTAAACTTTCTCACATGCC 58.672 33.333 0.00 0.00 35.60 4.40
170 171 8.328146 GGTTTTCTTTTAAACTTTCTCACATGC 58.672 33.333 0.00 0.00 37.96 4.06
171 172 9.364989 TGGTTTTCTTTTAAACTTTCTCACATG 57.635 29.630 0.00 0.00 37.96 3.21
173 174 9.936759 AATGGTTTTCTTTTAAACTTTCTCACA 57.063 25.926 0.00 0.00 37.96 3.58
175 176 9.296400 CGAATGGTTTTCTTTTAAACTTTCTCA 57.704 29.630 0.00 0.00 37.96 3.27
176 177 9.297586 ACGAATGGTTTTCTTTTAAACTTTCTC 57.702 29.630 0.00 0.00 37.96 2.87
177 178 9.083080 CACGAATGGTTTTCTTTTAAACTTTCT 57.917 29.630 0.00 0.00 37.96 2.52
178 179 8.325282 CCACGAATGGTTTTCTTTTAAACTTTC 58.675 33.333 0.00 0.00 41.64 2.62
179 180 8.192068 CCACGAATGGTTTTCTTTTAAACTTT 57.808 30.769 0.00 0.00 41.64 2.66
180 181 7.764695 CCACGAATGGTTTTCTTTTAAACTT 57.235 32.000 0.00 0.00 41.64 2.66
198 199 8.726988 CCAGAATTTTATCTTTCTTACCACGAA 58.273 33.333 0.00 0.00 29.85 3.85
199 200 7.148306 GCCAGAATTTTATCTTTCTTACCACGA 60.148 37.037 0.00 0.00 29.85 4.35
200 201 6.967199 GCCAGAATTTTATCTTTCTTACCACG 59.033 38.462 0.00 0.00 29.85 4.94
201 202 6.967199 CGCCAGAATTTTATCTTTCTTACCAC 59.033 38.462 0.00 0.00 29.85 4.16
202 203 6.882140 TCGCCAGAATTTTATCTTTCTTACCA 59.118 34.615 0.00 0.00 29.85 3.25
203 204 7.316544 TCGCCAGAATTTTATCTTTCTTACC 57.683 36.000 0.00 0.00 29.85 2.85
204 205 7.410485 CCTCGCCAGAATTTTATCTTTCTTAC 58.590 38.462 0.00 0.00 29.85 2.34
205 206 6.542370 CCCTCGCCAGAATTTTATCTTTCTTA 59.458 38.462 0.00 0.00 29.85 2.10
206 207 5.358160 CCCTCGCCAGAATTTTATCTTTCTT 59.642 40.000 0.00 0.00 29.85 2.52
207 208 4.884164 CCCTCGCCAGAATTTTATCTTTCT 59.116 41.667 0.00 0.00 32.48 2.52
208 209 4.881850 TCCCTCGCCAGAATTTTATCTTTC 59.118 41.667 0.00 0.00 0.00 2.62
209 210 4.855340 TCCCTCGCCAGAATTTTATCTTT 58.145 39.130 0.00 0.00 0.00 2.52
210 211 4.164221 TCTCCCTCGCCAGAATTTTATCTT 59.836 41.667 0.00 0.00 0.00 2.40
211 212 3.711704 TCTCCCTCGCCAGAATTTTATCT 59.288 43.478 0.00 0.00 0.00 1.98
212 213 4.061596 CTCTCCCTCGCCAGAATTTTATC 58.938 47.826 0.00 0.00 0.00 1.75
213 214 3.181450 CCTCTCCCTCGCCAGAATTTTAT 60.181 47.826 0.00 0.00 0.00 1.40
214 215 2.170607 CCTCTCCCTCGCCAGAATTTTA 59.829 50.000 0.00 0.00 0.00 1.52
215 216 1.065126 CCTCTCCCTCGCCAGAATTTT 60.065 52.381 0.00 0.00 0.00 1.82
216 217 0.543749 CCTCTCCCTCGCCAGAATTT 59.456 55.000 0.00 0.00 0.00 1.82
217 218 1.977293 GCCTCTCCCTCGCCAGAATT 61.977 60.000 0.00 0.00 0.00 2.17
218 219 2.439104 GCCTCTCCCTCGCCAGAAT 61.439 63.158 0.00 0.00 0.00 2.40
219 220 3.077556 GCCTCTCCCTCGCCAGAA 61.078 66.667 0.00 0.00 0.00 3.02
225 226 3.827898 GTCACCGCCTCTCCCTCG 61.828 72.222 0.00 0.00 0.00 4.63
226 227 3.827898 CGTCACCGCCTCTCCCTC 61.828 72.222 0.00 0.00 0.00 4.30
248 249 2.734673 GAAGCGAGCTGAAGGTGCG 61.735 63.158 0.00 0.00 35.28 5.34
249 250 1.633852 CTGAAGCGAGCTGAAGGTGC 61.634 60.000 0.00 0.00 0.00 5.01
250 251 0.320247 ACTGAAGCGAGCTGAAGGTG 60.320 55.000 0.00 0.00 0.00 4.00
251 252 0.320247 CACTGAAGCGAGCTGAAGGT 60.320 55.000 0.00 0.00 0.00 3.50
252 253 0.037882 TCACTGAAGCGAGCTGAAGG 60.038 55.000 0.00 0.00 0.00 3.46
253 254 1.659601 CATCACTGAAGCGAGCTGAAG 59.340 52.381 0.00 2.13 0.00 3.02
254 255 1.273327 TCATCACTGAAGCGAGCTGAA 59.727 47.619 0.00 0.00 0.00 3.02
255 256 0.890683 TCATCACTGAAGCGAGCTGA 59.109 50.000 0.00 0.00 0.00 4.26
256 257 0.997932 GTCATCACTGAAGCGAGCTG 59.002 55.000 0.00 0.00 31.85 4.24
257 258 0.605083 TGTCATCACTGAAGCGAGCT 59.395 50.000 0.00 0.00 31.85 4.09
258 259 0.997932 CTGTCATCACTGAAGCGAGC 59.002 55.000 0.00 0.00 31.85 5.03
259 260 2.257894 GACTGTCATCACTGAAGCGAG 58.742 52.381 2.24 0.00 31.85 5.03
260 261 1.401539 CGACTGTCATCACTGAAGCGA 60.402 52.381 8.73 0.00 31.85 4.93
261 262 0.987715 CGACTGTCATCACTGAAGCG 59.012 55.000 8.73 0.00 31.85 4.68
262 263 1.989165 GACGACTGTCATCACTGAAGC 59.011 52.381 8.73 0.00 44.82 3.86
263 264 2.245942 CGACGACTGTCATCACTGAAG 58.754 52.381 8.73 0.00 45.80 3.02
264 265 1.666023 GCGACGACTGTCATCACTGAA 60.666 52.381 8.73 0.00 45.80 3.02
265 266 0.109735 GCGACGACTGTCATCACTGA 60.110 55.000 8.73 0.00 45.80 3.41
266 267 0.109551 AGCGACGACTGTCATCACTG 60.110 55.000 8.73 0.00 45.80 3.66
267 268 1.398739 CTAGCGACGACTGTCATCACT 59.601 52.381 8.73 4.12 45.80 3.41
268 269 1.532090 CCTAGCGACGACTGTCATCAC 60.532 57.143 8.73 0.00 45.80 3.06
269 270 0.733150 CCTAGCGACGACTGTCATCA 59.267 55.000 8.73 0.00 45.80 3.07
270 271 0.733729 ACCTAGCGACGACTGTCATC 59.266 55.000 8.73 0.58 45.80 2.92
271 272 0.452184 CACCTAGCGACGACTGTCAT 59.548 55.000 8.73 0.00 45.80 3.06
272 273 1.583495 CCACCTAGCGACGACTGTCA 61.583 60.000 8.73 0.00 45.80 3.58
273 274 1.136984 CCACCTAGCGACGACTGTC 59.863 63.158 0.00 0.00 41.91 3.51
274 275 1.584380 GACCACCTAGCGACGACTGT 61.584 60.000 0.00 0.00 0.00 3.55
275 276 1.136984 GACCACCTAGCGACGACTG 59.863 63.158 0.00 0.00 0.00 3.51
276 277 0.251354 TAGACCACCTAGCGACGACT 59.749 55.000 0.00 0.00 0.00 4.18
277 278 0.376502 GTAGACCACCTAGCGACGAC 59.623 60.000 0.00 0.00 0.00 4.34
278 279 1.086067 CGTAGACCACCTAGCGACGA 61.086 60.000 0.00 0.00 0.00 4.20
279 280 1.351012 CGTAGACCACCTAGCGACG 59.649 63.158 0.00 0.00 0.00 5.12
280 281 0.745845 TCCGTAGACCACCTAGCGAC 60.746 60.000 0.00 0.00 0.00 5.19
281 282 0.182061 ATCCGTAGACCACCTAGCGA 59.818 55.000 0.00 0.00 0.00 4.93
282 283 0.592148 GATCCGTAGACCACCTAGCG 59.408 60.000 0.00 0.00 0.00 4.26
283 284 1.609555 CAGATCCGTAGACCACCTAGC 59.390 57.143 0.00 0.00 0.00 3.42
284 285 2.158652 TCCAGATCCGTAGACCACCTAG 60.159 54.545 0.00 0.00 0.00 3.02
285 286 1.848388 TCCAGATCCGTAGACCACCTA 59.152 52.381 0.00 0.00 0.00 3.08
286 287 0.629596 TCCAGATCCGTAGACCACCT 59.370 55.000 0.00 0.00 0.00 4.00
287 288 1.341531 CATCCAGATCCGTAGACCACC 59.658 57.143 0.00 0.00 0.00 4.61
288 289 2.032620 ACATCCAGATCCGTAGACCAC 58.967 52.381 0.00 0.00 0.00 4.16
289 290 2.454336 ACATCCAGATCCGTAGACCA 57.546 50.000 0.00 0.00 0.00 4.02
290 291 5.470047 AATTACATCCAGATCCGTAGACC 57.530 43.478 0.00 0.00 0.00 3.85
291 292 7.787725 AAAAATTACATCCAGATCCGTAGAC 57.212 36.000 0.00 0.00 0.00 2.59
319 320 9.376075 CATGACAGTACTAAGAACATCAGAAAT 57.624 33.333 0.00 0.00 0.00 2.17
320 321 8.585018 TCATGACAGTACTAAGAACATCAGAAA 58.415 33.333 0.00 0.00 0.00 2.52
321 322 8.122472 TCATGACAGTACTAAGAACATCAGAA 57.878 34.615 0.00 0.00 0.00 3.02
322 323 7.703058 TCATGACAGTACTAAGAACATCAGA 57.297 36.000 0.00 0.00 0.00 3.27
323 324 8.815189 CAATCATGACAGTACTAAGAACATCAG 58.185 37.037 0.00 0.00 0.00 2.90
324 325 8.314021 ACAATCATGACAGTACTAAGAACATCA 58.686 33.333 0.00 0.00 0.00 3.07
325 326 8.709386 ACAATCATGACAGTACTAAGAACATC 57.291 34.615 0.00 0.00 0.00 3.06
327 328 9.990360 TTTACAATCATGACAGTACTAAGAACA 57.010 29.630 0.00 0.00 0.00 3.18
381 382 2.113289 CGCGAACAACCGAACATTTTT 58.887 42.857 0.00 0.00 0.00 1.94
382 383 1.064357 ACGCGAACAACCGAACATTTT 59.936 42.857 15.93 0.00 0.00 1.82
383 384 0.658897 ACGCGAACAACCGAACATTT 59.341 45.000 15.93 0.00 0.00 2.32
384 385 1.192980 GTACGCGAACAACCGAACATT 59.807 47.619 15.93 0.00 0.00 2.71
385 386 0.785979 GTACGCGAACAACCGAACAT 59.214 50.000 15.93 0.00 0.00 2.71
386 387 0.527169 TGTACGCGAACAACCGAACA 60.527 50.000 15.93 0.00 0.00 3.18
387 388 0.111574 GTGTACGCGAACAACCGAAC 60.112 55.000 15.93 0.00 0.00 3.95
388 389 0.248990 AGTGTACGCGAACAACCGAA 60.249 50.000 15.93 0.00 0.00 4.30
389 390 0.661187 GAGTGTACGCGAACAACCGA 60.661 55.000 15.93 0.00 0.00 4.69
390 391 1.611592 GGAGTGTACGCGAACAACCG 61.612 60.000 15.93 0.00 0.00 4.44
391 392 0.319297 AGGAGTGTACGCGAACAACC 60.319 55.000 15.93 14.64 0.00 3.77
392 393 1.058404 GAGGAGTGTACGCGAACAAC 58.942 55.000 15.93 5.42 0.00 3.32
393 394 0.669619 TGAGGAGTGTACGCGAACAA 59.330 50.000 15.93 0.00 0.00 2.83
394 395 0.669619 TTGAGGAGTGTACGCGAACA 59.330 50.000 15.93 0.00 0.00 3.18
395 396 1.058404 GTTGAGGAGTGTACGCGAAC 58.942 55.000 15.93 8.30 0.00 3.95
396 397 0.956633 AGTTGAGGAGTGTACGCGAA 59.043 50.000 15.93 0.00 0.00 4.70
397 398 1.466167 GTAGTTGAGGAGTGTACGCGA 59.534 52.381 15.93 0.00 0.00 5.87
398 399 1.467035 GGTAGTTGAGGAGTGTACGCG 60.467 57.143 3.53 3.53 0.00 6.01
399 400 1.135170 GGGTAGTTGAGGAGTGTACGC 60.135 57.143 0.00 0.00 0.00 4.42
400 401 1.475682 GGGGTAGTTGAGGAGTGTACG 59.524 57.143 0.00 0.00 0.00 3.67
401 402 2.496470 CTGGGGTAGTTGAGGAGTGTAC 59.504 54.545 0.00 0.00 0.00 2.90
402 403 2.111255 ACTGGGGTAGTTGAGGAGTGTA 59.889 50.000 0.00 0.00 35.67 2.90
403 404 1.132817 ACTGGGGTAGTTGAGGAGTGT 60.133 52.381 0.00 0.00 35.67 3.55
404 405 1.645710 ACTGGGGTAGTTGAGGAGTG 58.354 55.000 0.00 0.00 35.67 3.51
413 414 4.534897 AGTGCTATTTGTAACTGGGGTAGT 59.465 41.667 0.00 0.00 42.89 2.73
414 415 5.099042 AGTGCTATTTGTAACTGGGGTAG 57.901 43.478 0.00 0.00 0.00 3.18
415 416 6.623979 TTAGTGCTATTTGTAACTGGGGTA 57.376 37.500 0.00 0.00 0.00 3.69
416 417 5.508280 TTAGTGCTATTTGTAACTGGGGT 57.492 39.130 0.00 0.00 0.00 4.95
417 418 6.827586 TTTTAGTGCTATTTGTAACTGGGG 57.172 37.500 0.00 0.00 0.00 4.96
418 419 8.739972 AGAATTTTAGTGCTATTTGTAACTGGG 58.260 33.333 0.00 0.00 0.00 4.45
429 430 9.833917 GGGAGTAGTTTAGAATTTTAGTGCTAT 57.166 33.333 0.00 0.00 0.00 2.97
430 431 9.043548 AGGGAGTAGTTTAGAATTTTAGTGCTA 57.956 33.333 0.00 0.00 0.00 3.49
431 432 7.919151 AGGGAGTAGTTTAGAATTTTAGTGCT 58.081 34.615 0.00 0.00 0.00 4.40
432 433 7.280428 GGAGGGAGTAGTTTAGAATTTTAGTGC 59.720 40.741 0.00 0.00 0.00 4.40
433 434 7.491696 CGGAGGGAGTAGTTTAGAATTTTAGTG 59.508 40.741 0.00 0.00 0.00 2.74
434 435 7.179872 ACGGAGGGAGTAGTTTAGAATTTTAGT 59.820 37.037 0.00 0.00 0.00 2.24
435 436 7.554211 ACGGAGGGAGTAGTTTAGAATTTTAG 58.446 38.462 0.00 0.00 0.00 1.85
436 437 7.364144 GGACGGAGGGAGTAGTTTAGAATTTTA 60.364 40.741 0.00 0.00 0.00 1.52
437 438 6.370186 ACGGAGGGAGTAGTTTAGAATTTT 57.630 37.500 0.00 0.00 0.00 1.82
438 439 5.105023 GGACGGAGGGAGTAGTTTAGAATTT 60.105 44.000 0.00 0.00 0.00 1.82
439 440 4.405036 GGACGGAGGGAGTAGTTTAGAATT 59.595 45.833 0.00 0.00 0.00 2.17
440 441 3.959449 GGACGGAGGGAGTAGTTTAGAAT 59.041 47.826 0.00 0.00 0.00 2.40
441 442 3.359950 GGACGGAGGGAGTAGTTTAGAA 58.640 50.000 0.00 0.00 0.00 2.10
442 443 2.357569 GGGACGGAGGGAGTAGTTTAGA 60.358 54.545 0.00 0.00 0.00 2.10
443 444 2.030371 GGGACGGAGGGAGTAGTTTAG 58.970 57.143 0.00 0.00 0.00 1.85
444 445 1.358787 TGGGACGGAGGGAGTAGTTTA 59.641 52.381 0.00 0.00 0.00 2.01
445 446 0.115745 TGGGACGGAGGGAGTAGTTT 59.884 55.000 0.00 0.00 0.00 2.66
446 447 0.338814 ATGGGACGGAGGGAGTAGTT 59.661 55.000 0.00 0.00 0.00 2.24
447 448 1.229131 TATGGGACGGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
448 449 2.563179 CAATATGGGACGGAGGGAGTAG 59.437 54.545 0.00 0.00 0.00 2.57
449 450 2.090943 ACAATATGGGACGGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
450 451 1.344087 ACAATATGGGACGGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
451 452 1.424638 ACAATATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
452 453 2.779429 TACAATATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
453 454 2.969950 TCTTACAATATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
454 455 3.552273 CGTCTTACAATATGGGACGGAGG 60.552 52.174 0.00 0.00 43.69 4.30
455 456 3.639538 CGTCTTACAATATGGGACGGAG 58.360 50.000 0.00 0.00 43.69 4.63
456 457 2.223876 GCGTCTTACAATATGGGACGGA 60.224 50.000 14.00 0.00 46.26 4.69
457 458 2.132762 GCGTCTTACAATATGGGACGG 58.867 52.381 14.00 0.00 46.26 4.79
459 460 5.813080 AAAAGCGTCTTACAATATGGGAC 57.187 39.130 0.00 0.00 0.00 4.46
460 461 5.941058 TCAAAAAGCGTCTTACAATATGGGA 59.059 36.000 0.00 0.00 0.00 4.37
461 462 6.027749 GTCAAAAAGCGTCTTACAATATGGG 58.972 40.000 0.00 0.00 0.00 4.00
462 463 6.607689 TGTCAAAAAGCGTCTTACAATATGG 58.392 36.000 0.00 0.00 0.00 2.74
463 464 8.577939 CAATGTCAAAAAGCGTCTTACAATATG 58.422 33.333 0.00 0.00 0.00 1.78
464 465 8.296713 ACAATGTCAAAAAGCGTCTTACAATAT 58.703 29.630 0.00 0.00 0.00 1.28
465 466 7.644490 ACAATGTCAAAAAGCGTCTTACAATA 58.356 30.769 0.00 0.00 0.00 1.90
466 467 6.503524 ACAATGTCAAAAAGCGTCTTACAAT 58.496 32.000 0.00 0.00 0.00 2.71
467 468 5.885881 ACAATGTCAAAAAGCGTCTTACAA 58.114 33.333 0.00 0.00 0.00 2.41
468 469 5.493133 ACAATGTCAAAAAGCGTCTTACA 57.507 34.783 0.00 0.00 0.00 2.41
469 470 6.573725 CACTACAATGTCAAAAAGCGTCTTAC 59.426 38.462 0.00 0.00 0.00 2.34
470 471 6.259167 ACACTACAATGTCAAAAAGCGTCTTA 59.741 34.615 0.00 0.00 0.00 2.10
471 472 5.065988 ACACTACAATGTCAAAAAGCGTCTT 59.934 36.000 0.00 0.00 0.00 3.01
472 473 4.574828 ACACTACAATGTCAAAAAGCGTCT 59.425 37.500 0.00 0.00 0.00 4.18
473 474 4.844267 ACACTACAATGTCAAAAAGCGTC 58.156 39.130 0.00 0.00 0.00 5.19
474 475 4.893424 ACACTACAATGTCAAAAAGCGT 57.107 36.364 0.00 0.00 0.00 5.07
475 476 6.195868 TGTAACACTACAATGTCAAAAAGCG 58.804 36.000 0.00 0.00 35.03 4.68
476 477 7.979115 TTGTAACACTACAATGTCAAAAAGC 57.021 32.000 0.00 0.00 41.98 3.51
478 479 9.692749 TGTTTTGTAACACTACAATGTCAAAAA 57.307 25.926 7.97 0.76 45.29 1.94
479 480 9.862371 ATGTTTTGTAACACTACAATGTCAAAA 57.138 25.926 0.00 0.00 46.38 2.44
480 481 9.509855 GATGTTTTGTAACACTACAATGTCAAA 57.490 29.630 0.00 0.00 46.38 2.69
481 482 8.898761 AGATGTTTTGTAACACTACAATGTCAA 58.101 29.630 0.00 0.00 46.38 3.18
482 483 8.445275 AGATGTTTTGTAACACTACAATGTCA 57.555 30.769 0.00 1.01 46.38 3.58
496 497 9.496873 CCGTCCCATAATATAAGATGTTTTGTA 57.503 33.333 0.00 0.00 0.00 2.41
497 498 8.215050 TCCGTCCCATAATATAAGATGTTTTGT 58.785 33.333 0.00 0.00 0.00 2.83
498 499 8.615878 TCCGTCCCATAATATAAGATGTTTTG 57.384 34.615 0.00 0.00 0.00 2.44
499 500 7.883311 CCTCCGTCCCATAATATAAGATGTTTT 59.117 37.037 0.00 0.00 0.00 2.43
500 501 7.394816 CCTCCGTCCCATAATATAAGATGTTT 58.605 38.462 0.00 0.00 0.00 2.83
501 502 6.070194 CCCTCCGTCCCATAATATAAGATGTT 60.070 42.308 0.00 0.00 0.00 2.71
502 503 5.425539 CCCTCCGTCCCATAATATAAGATGT 59.574 44.000 0.00 0.00 0.00 3.06
503 504 5.661312 TCCCTCCGTCCCATAATATAAGATG 59.339 44.000 0.00 0.00 0.00 2.90
504 505 5.850278 TCCCTCCGTCCCATAATATAAGAT 58.150 41.667 0.00 0.00 0.00 2.40
505 506 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
506 507 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
507 508 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
508 509 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
509 510 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
510 511 3.140707 TGTACTCCCTCCGTCCCATAATA 59.859 47.826 0.00 0.00 0.00 0.98
511 512 2.090943 TGTACTCCCTCCGTCCCATAAT 60.091 50.000 0.00 0.00 0.00 1.28
512 513 1.288633 TGTACTCCCTCCGTCCCATAA 59.711 52.381 0.00 0.00 0.00 1.90
513 514 0.928505 TGTACTCCCTCCGTCCCATA 59.071 55.000 0.00 0.00 0.00 2.74
514 515 0.264955 ATGTACTCCCTCCGTCCCAT 59.735 55.000 0.00 0.00 0.00 4.00
515 516 0.042131 AATGTACTCCCTCCGTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
516 517 0.751452 GAATGTACTCCCTCCGTCCC 59.249 60.000 0.00 0.00 0.00 4.46
517 518 0.751452 GGAATGTACTCCCTCCGTCC 59.249 60.000 0.00 0.00 0.00 4.79
518 519 1.682323 GAGGAATGTACTCCCTCCGTC 59.318 57.143 14.05 0.00 40.35 4.79
519 520 1.288335 AGAGGAATGTACTCCCTCCGT 59.712 52.381 18.59 5.46 45.77 4.69
520 521 1.957877 GAGAGGAATGTACTCCCTCCG 59.042 57.143 18.59 0.00 45.77 4.63
521 522 3.033659 TGAGAGGAATGTACTCCCTCC 57.966 52.381 18.59 13.25 45.77 4.30
522 523 6.732896 TTATTGAGAGGAATGTACTCCCTC 57.267 41.667 16.07 16.07 45.16 4.30
523 524 8.798975 TTATTATTGAGAGGAATGTACTCCCT 57.201 34.615 0.00 0.00 35.95 4.20
524 525 9.847224 TTTTATTATTGAGAGGAATGTACTCCC 57.153 33.333 0.00 0.00 35.95 4.30
596 597 9.393786 TCTCTACAAAAATAATAGGCTAGGGAT 57.606 33.333 0.00 0.00 0.00 3.85
703 718 2.584835 TCTGGTTTGGATTGGTCTGG 57.415 50.000 0.00 0.00 0.00 3.86
772 792 2.037367 ACTCTGTCGGGCTGCCTA 59.963 61.111 19.68 4.26 0.00 3.93
920 1536 3.561120 AAAATGAGGGCCACGCGGA 62.561 57.895 12.47 0.00 0.00 5.54
921 1537 3.061848 AAAATGAGGGCCACGCGG 61.062 61.111 12.47 0.00 0.00 6.46
931 1547 7.255569 TGCAGCTTAAGATCAATCAAAATGAG 58.744 34.615 6.67 0.00 0.00 2.90
1008 1667 2.357517 AGCGGCACCTTCACTTCG 60.358 61.111 1.45 0.00 0.00 3.79
1192 1851 4.222145 GGATAAGTGTGTACTGACCAGGAA 59.778 45.833 0.00 0.00 37.19 3.36
1214 1876 3.640967 TCAAAGTCAAACAGGGGAAATGG 59.359 43.478 0.00 0.00 0.00 3.16
1219 1881 3.496160 GCTACTCAAAGTCAAACAGGGGA 60.496 47.826 0.00 0.00 0.00 4.81
1240 1917 4.755266 TCCTAAGAAATCCAGGTAGTGC 57.245 45.455 0.00 0.00 0.00 4.40
1245 1922 6.973642 TGATTGAATCCTAAGAAATCCAGGT 58.026 36.000 2.26 0.00 0.00 4.00
1310 2002 4.481930 TCACACCAATCGATTGAACAAC 57.518 40.909 34.21 0.00 40.14 3.32
1311 2003 4.759183 TCATCACACCAATCGATTGAACAA 59.241 37.500 34.21 17.87 40.14 2.83
1314 2006 5.003160 ACTTCATCACACCAATCGATTGAA 58.997 37.500 34.21 19.10 40.14 2.69
1328 2020 6.299604 CGAATGTGTGACTAAACTTCATCAC 58.700 40.000 0.00 0.00 41.51 3.06
1476 2177 4.468769 TCGCCCAGGTCCCCGTAT 62.469 66.667 0.00 0.00 0.00 3.06
1848 2549 1.664649 CTCGAAGCAGAACACGGCA 60.665 57.895 0.00 0.00 0.00 5.69
2488 3200 2.849880 TTGCTCTCTTTTGTGTGTGC 57.150 45.000 0.00 0.00 0.00 4.57
2505 3228 6.421377 TGACTGTAATTTCGATGGTGATTG 57.579 37.500 0.00 0.00 0.00 2.67
2508 3231 5.301555 TGTTGACTGTAATTTCGATGGTGA 58.698 37.500 0.00 0.00 0.00 4.02
2509 3232 5.605564 TGTTGACTGTAATTTCGATGGTG 57.394 39.130 0.00 0.00 0.00 4.17
2522 3246 2.418368 TGCAGGTCTTTGTTGACTGT 57.582 45.000 0.00 0.00 37.16 3.55
2523 3247 3.781079 TTTGCAGGTCTTTGTTGACTG 57.219 42.857 0.00 0.00 37.16 3.51
2541 3269 3.790089 AACCTCCGATCTCTGGTTTTT 57.210 42.857 7.13 0.00 39.48 1.94
2549 3277 0.315568 ATGCGCTAACCTCCGATCTC 59.684 55.000 9.73 0.00 0.00 2.75
2553 3281 1.734137 GAGATGCGCTAACCTCCGA 59.266 57.895 9.73 0.00 0.00 4.55
2555 3283 1.300233 CGGAGATGCGCTAACCTCC 60.300 63.158 20.22 20.22 41.25 4.30
2579 3307 2.285977 ACTGTGTCCGTTTTCAAGGTC 58.714 47.619 0.00 0.00 0.00 3.85
2580 3308 2.413310 ACTGTGTCCGTTTTCAAGGT 57.587 45.000 0.00 0.00 0.00 3.50
2581 3309 3.435671 GGATACTGTGTCCGTTTTCAAGG 59.564 47.826 7.87 0.00 0.00 3.61
2582 3310 4.663636 GGATACTGTGTCCGTTTTCAAG 57.336 45.455 7.87 0.00 0.00 3.02
2591 3319 1.226888 GGCGTCGGATACTGTGTCC 60.227 63.158 13.07 13.07 0.00 4.02
2592 3320 1.585521 CGGCGTCGGATACTGTGTC 60.586 63.158 0.00 0.00 0.00 3.67
2593 3321 2.042259 TCGGCGTCGGATACTGTGT 61.042 57.895 10.62 0.00 36.95 3.72
2594 3322 1.585521 GTCGGCGTCGGATACTGTG 60.586 63.158 10.62 0.00 36.95 3.66
2595 3323 2.768492 GGTCGGCGTCGGATACTGT 61.768 63.158 10.62 0.00 36.95 3.55
2596 3324 2.025727 GGTCGGCGTCGGATACTG 59.974 66.667 10.62 0.00 36.95 2.74
2597 3325 2.124403 AGGTCGGCGTCGGATACT 60.124 61.111 10.62 0.00 36.95 2.12
2598 3326 2.330745 GAGGTCGGCGTCGGATAC 59.669 66.667 10.62 0.00 36.95 2.24
2599 3327 2.903855 GGAGGTCGGCGTCGGATA 60.904 66.667 10.62 0.00 36.95 2.59
2602 3330 3.869473 TTTTGGAGGTCGGCGTCGG 62.869 63.158 10.62 0.00 36.95 4.79
2603 3331 2.356553 TTTTGGAGGTCGGCGTCG 60.357 61.111 1.15 1.15 37.82 5.12
2604 3332 2.664436 CGTTTTGGAGGTCGGCGTC 61.664 63.158 6.85 0.00 0.00 5.19
2605 3333 2.663852 CGTTTTGGAGGTCGGCGT 60.664 61.111 6.85 0.00 0.00 5.68
2606 3334 3.419759 CCGTTTTGGAGGTCGGCG 61.420 66.667 0.00 0.00 42.00 6.46
2607 3335 2.031465 TCCGTTTTGGAGGTCGGC 59.969 61.111 0.00 0.00 43.74 5.54
2628 3356 0.669077 GTCAGACGGCGATGGATACT 59.331 55.000 16.62 0.00 37.61 2.12
2630 3358 0.668535 CAGTCAGACGGCGATGGATA 59.331 55.000 16.62 0.00 0.00 2.59
2633 3361 2.202797 CCAGTCAGACGGCGATGG 60.203 66.667 16.62 7.73 0.00 3.51
2638 3366 4.459089 GGCTCCCAGTCAGACGGC 62.459 72.222 6.05 0.00 0.00 5.68
2640 3368 4.135153 CCGGCTCCCAGTCAGACG 62.135 72.222 0.00 0.00 42.48 4.18
2645 3373 4.554036 GATGGCCGGCTCCCAGTC 62.554 72.222 28.56 8.18 35.48 3.51
2647 3375 2.916527 ATTTGATGGCCGGCTCCCAG 62.917 60.000 28.56 0.00 35.48 4.45
2656 3384 2.726821 TGGAGACAGAATTTGATGGCC 58.273 47.619 0.00 0.00 35.01 5.36
2663 3391 2.806244 CGGACGTTTGGAGACAGAATTT 59.194 45.455 0.00 0.00 44.54 1.82
2667 3395 0.313043 GACGGACGTTTGGAGACAGA 59.687 55.000 0.00 0.00 44.54 3.41
2668 3396 0.314302 AGACGGACGTTTGGAGACAG 59.686 55.000 0.00 0.00 44.54 3.51
2673 3401 0.748450 AACAGAGACGGACGTTTGGA 59.252 50.000 0.00 0.00 0.00 3.53
2676 3404 5.756833 AGAAATAAAACAGAGACGGACGTTT 59.243 36.000 0.00 0.00 33.15 3.60
2679 3407 5.840940 AAGAAATAAAACAGAGACGGACG 57.159 39.130 0.00 0.00 0.00 4.79
2680 3408 6.872547 ACCTAAGAAATAAAACAGAGACGGAC 59.127 38.462 0.00 0.00 0.00 4.79
2681 3409 7.001099 ACCTAAGAAATAAAACAGAGACGGA 57.999 36.000 0.00 0.00 0.00 4.69
2682 3410 6.313164 GGACCTAAGAAATAAAACAGAGACGG 59.687 42.308 0.00 0.00 0.00 4.79
2684 3412 7.660208 TGTGGACCTAAGAAATAAAACAGAGAC 59.340 37.037 0.00 0.00 0.00 3.36
2685 3413 7.741785 TGTGGACCTAAGAAATAAAACAGAGA 58.258 34.615 0.00 0.00 0.00 3.10
2687 3415 7.776030 TGTTGTGGACCTAAGAAATAAAACAGA 59.224 33.333 0.00 0.00 0.00 3.41
2690 3418 9.589111 TTTTGTTGTGGACCTAAGAAATAAAAC 57.411 29.630 0.00 0.00 0.00 2.43
2703 3432 5.861787 GTGTGCTATTATTTTGTTGTGGACC 59.138 40.000 0.00 0.00 0.00 4.46
2742 3476 8.297470 ACTAGTGCCACATTTGATATTTTCAT 57.703 30.769 0.00 0.00 33.34 2.57
2760 3495 7.919690 TGTAATATCTGCATTTGAACTAGTGC 58.080 34.615 0.00 0.00 38.05 4.40
2846 3583 7.933215 ATTAGCGTTTAAAAGGGACAACTAT 57.067 32.000 3.30 0.00 0.00 2.12
2868 3605 6.767456 AGAAAGATCCGATTGAGCATCTATT 58.233 36.000 0.00 0.00 34.92 1.73
2896 3633 6.427853 TCAACATCAAACAACTCATGAGTAGG 59.572 38.462 28.10 23.53 41.58 3.18
2980 3718 0.034089 GAACATTGGTGGCCCTAGCT 60.034 55.000 0.00 0.00 39.73 3.32
2982 3720 2.514458 AAGAACATTGGTGGCCCTAG 57.486 50.000 0.00 0.00 0.00 3.02
2988 3726 6.389906 GTCTGGAATTTAAGAACATTGGTGG 58.610 40.000 0.00 0.00 0.00 4.61
3001 3741 8.324191 AGATGATGTTAGAGGTCTGGAATTTA 57.676 34.615 0.00 0.00 0.00 1.40
3016 3756 4.971282 AGGATGAGGGTGAAGATGATGTTA 59.029 41.667 0.00 0.00 0.00 2.41
3088 3829 4.402616 AAAGAATGGGATCCAAAGACCA 57.597 40.909 15.23 0.77 36.95 4.02
3106 3847 3.003689 AGTTGTTCGAGGACATGCAAAAG 59.996 43.478 0.00 0.00 0.00 2.27
3231 3983 3.007506 TGGGCGACTTTCATCAAGACTAA 59.992 43.478 0.00 0.00 36.21 2.24
3241 3993 1.118965 TCCTCTGTGGGCGACTTTCA 61.119 55.000 0.31 0.00 36.20 2.69
3245 3997 0.259065 TCTATCCTCTGTGGGCGACT 59.741 55.000 0.31 0.00 36.20 4.18
3255 4007 5.050126 TCTGGTTGACGTATCTATCCTCT 57.950 43.478 0.00 0.00 0.00 3.69
3284 4037 5.808042 AATGAGCATGACTACAACATGTC 57.192 39.130 0.00 0.00 44.52 3.06
3311 4069 3.851458 AGCTCATCCATGCAACTATCA 57.149 42.857 0.00 0.00 0.00 2.15
3312 4070 3.881688 ACAAGCTCATCCATGCAACTATC 59.118 43.478 0.00 0.00 0.00 2.08
3326 4084 0.473755 TTGCCTGAAGGACAAGCTCA 59.526 50.000 0.00 0.00 36.93 4.26
3391 4149 1.522668 TCTTTGGCATGTTCAGGTCG 58.477 50.000 0.00 0.00 0.00 4.79
3415 4173 2.629017 AGGACCTTTGGATTTGGCAT 57.371 45.000 0.00 0.00 0.00 4.40
3427 4185 2.240667 AGCAGTTGCATCATAGGACCTT 59.759 45.455 0.00 0.00 45.16 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.