Multiple sequence alignment - TraesCS5D01G484200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G484200 chr5D 100.000 2549 0 0 1 2549 520498110 520495562 0.000000e+00 4708
1 TraesCS5D01G484200 chr5D 95.661 1982 75 8 572 2549 336262624 336264598 0.000000e+00 3173
2 TraesCS5D01G484200 chr5D 97.253 364 10 0 1 364 520503740 520503377 3.600000e-173 617
3 TraesCS5D01G484200 chr5D 96.978 364 11 0 1 364 464464819 464464456 1.680000e-171 612
4 TraesCS5D01G484200 chr7D 95.817 1984 68 10 570 2549 574727120 574725148 0.000000e+00 3190
5 TraesCS5D01G484200 chrUn 95.683 1992 69 12 570 2549 93726512 93724526 0.000000e+00 3186
6 TraesCS5D01G484200 chr2D 95.716 1984 75 8 572 2549 331197179 331199158 0.000000e+00 3184
7 TraesCS5D01G484200 chr6B 95.262 1984 82 10 572 2549 660437743 660435766 0.000000e+00 3133
8 TraesCS5D01G484200 chr7B 95.176 1990 83 11 567 2549 692881446 692883429 0.000000e+00 3131
9 TraesCS5D01G484200 chr7B 95.121 1988 84 10 570 2549 552932145 552930163 0.000000e+00 3121
10 TraesCS5D01G484200 chr7A 95.126 1990 84 11 568 2549 701581936 701583920 0.000000e+00 3125
11 TraesCS5D01G484200 chr7A 96.703 364 12 0 1 364 370617008 370617371 7.800000e-170 606
12 TraesCS5D01G484200 chr3A 95.169 1987 83 11 569 2549 617401020 617402999 0.000000e+00 3125
13 TraesCS5D01G484200 chr4D 97.527 364 9 0 1 364 254429113 254429476 7.740000e-175 623
14 TraesCS5D01G484200 chr6D 97.019 369 11 0 1 369 229350395 229350763 2.790000e-174 621
15 TraesCS5D01G484200 chr6A 97.253 364 10 0 1 364 265453378 265453741 3.600000e-173 617
16 TraesCS5D01G484200 chr3D 97.253 364 10 0 1 364 241063243 241062880 3.600000e-173 617
17 TraesCS5D01G484200 chr3D 96.978 364 11 0 1 364 237269073 237269436 1.680000e-171 612
18 TraesCS5D01G484200 chr1D 96.477 369 12 1 1 369 328829730 328830097 2.170000e-170 608


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G484200 chr5D 520495562 520498110 2548 True 4708 4708 100.000 1 2549 1 chr5D.!!$R2 2548
1 TraesCS5D01G484200 chr5D 336262624 336264598 1974 False 3173 3173 95.661 572 2549 1 chr5D.!!$F1 1977
2 TraesCS5D01G484200 chr7D 574725148 574727120 1972 True 3190 3190 95.817 570 2549 1 chr7D.!!$R1 1979
3 TraesCS5D01G484200 chrUn 93724526 93726512 1986 True 3186 3186 95.683 570 2549 1 chrUn.!!$R1 1979
4 TraesCS5D01G484200 chr2D 331197179 331199158 1979 False 3184 3184 95.716 572 2549 1 chr2D.!!$F1 1977
5 TraesCS5D01G484200 chr6B 660435766 660437743 1977 True 3133 3133 95.262 572 2549 1 chr6B.!!$R1 1977
6 TraesCS5D01G484200 chr7B 692881446 692883429 1983 False 3131 3131 95.176 567 2549 1 chr7B.!!$F1 1982
7 TraesCS5D01G484200 chr7B 552930163 552932145 1982 True 3121 3121 95.121 570 2549 1 chr7B.!!$R1 1979
8 TraesCS5D01G484200 chr7A 701581936 701583920 1984 False 3125 3125 95.126 568 2549 1 chr7A.!!$F2 1981
9 TraesCS5D01G484200 chr3A 617401020 617402999 1979 False 3125 3125 95.169 569 2549 1 chr3A.!!$F1 1980

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
386 387 0.032952 AACTGCCGCGTAAAGTCTGA 59.967 50.0 4.92 0.0 0.0 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2309 2334 0.310543 ACGCGTGTGCAAACATTCAT 59.689 45.0 12.93 0.0 42.97 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.695217 TGGACGAAATTTATGAAGTGGC 57.305 40.909 0.00 0.00 0.00 5.01
22 23 4.075682 TGGACGAAATTTATGAAGTGGCA 58.924 39.130 0.00 0.00 0.00 4.92
23 24 4.704540 TGGACGAAATTTATGAAGTGGCAT 59.295 37.500 0.00 0.00 0.00 4.40
24 25 5.163663 TGGACGAAATTTATGAAGTGGCATC 60.164 40.000 0.00 0.00 0.00 3.91
25 26 5.066505 GGACGAAATTTATGAAGTGGCATCT 59.933 40.000 0.00 0.00 0.00 2.90
26 27 6.404734 GGACGAAATTTATGAAGTGGCATCTT 60.405 38.462 0.00 0.00 0.00 2.40
27 28 6.324819 ACGAAATTTATGAAGTGGCATCTTG 58.675 36.000 6.99 0.00 0.00 3.02
28 29 6.071952 ACGAAATTTATGAAGTGGCATCTTGT 60.072 34.615 6.99 0.43 0.00 3.16
29 30 6.252015 CGAAATTTATGAAGTGGCATCTTGTG 59.748 38.462 6.99 0.00 0.00 3.33
30 31 6.594788 AATTTATGAAGTGGCATCTTGTGT 57.405 33.333 6.99 0.00 0.00 3.72
31 32 7.701539 AATTTATGAAGTGGCATCTTGTGTA 57.298 32.000 6.99 0.00 0.00 2.90
32 33 6.741992 TTTATGAAGTGGCATCTTGTGTAG 57.258 37.500 6.99 0.00 0.00 2.74
33 34 3.769739 TGAAGTGGCATCTTGTGTAGT 57.230 42.857 6.99 0.00 0.00 2.73
34 35 4.085357 TGAAGTGGCATCTTGTGTAGTT 57.915 40.909 6.99 0.00 0.00 2.24
35 36 4.460263 TGAAGTGGCATCTTGTGTAGTTT 58.540 39.130 6.99 0.00 0.00 2.66
36 37 4.275689 TGAAGTGGCATCTTGTGTAGTTTG 59.724 41.667 6.99 0.00 0.00 2.93
37 38 3.820557 AGTGGCATCTTGTGTAGTTTGT 58.179 40.909 0.00 0.00 0.00 2.83
38 39 3.815401 AGTGGCATCTTGTGTAGTTTGTC 59.185 43.478 0.00 0.00 0.00 3.18
39 40 3.058224 GTGGCATCTTGTGTAGTTTGTCC 60.058 47.826 0.00 0.00 0.00 4.02
40 41 3.146066 GGCATCTTGTGTAGTTTGTCCA 58.854 45.455 0.00 0.00 0.00 4.02
41 42 3.568007 GGCATCTTGTGTAGTTTGTCCAA 59.432 43.478 0.00 0.00 0.00 3.53
42 43 4.320494 GGCATCTTGTGTAGTTTGTCCAAG 60.320 45.833 0.00 0.00 35.09 3.61
43 44 4.320494 GCATCTTGTGTAGTTTGTCCAAGG 60.320 45.833 0.00 0.00 34.65 3.61
44 45 3.211045 TCTTGTGTAGTTTGTCCAAGGC 58.789 45.455 0.00 0.00 34.65 4.35
45 46 3.118038 TCTTGTGTAGTTTGTCCAAGGCT 60.118 43.478 0.00 0.00 34.65 4.58
46 47 3.290948 TGTGTAGTTTGTCCAAGGCTT 57.709 42.857 0.00 0.00 0.00 4.35
47 48 3.211045 TGTGTAGTTTGTCCAAGGCTTC 58.789 45.455 0.00 0.00 0.00 3.86
48 49 3.211045 GTGTAGTTTGTCCAAGGCTTCA 58.789 45.455 0.00 0.00 0.00 3.02
49 50 3.821033 GTGTAGTTTGTCCAAGGCTTCAT 59.179 43.478 0.00 0.00 0.00 2.57
50 51 3.820467 TGTAGTTTGTCCAAGGCTTCATG 59.180 43.478 0.00 0.00 0.00 3.07
51 52 1.615392 AGTTTGTCCAAGGCTTCATGC 59.385 47.619 0.00 0.00 41.94 4.06
52 53 1.340889 GTTTGTCCAAGGCTTCATGCA 59.659 47.619 0.00 0.00 45.15 3.96
53 54 0.961019 TTGTCCAAGGCTTCATGCAC 59.039 50.000 0.00 0.00 45.15 4.57
54 55 0.111061 TGTCCAAGGCTTCATGCACT 59.889 50.000 0.00 0.00 45.15 4.40
55 56 0.807496 GTCCAAGGCTTCATGCACTC 59.193 55.000 0.00 0.00 45.15 3.51
56 57 0.401356 TCCAAGGCTTCATGCACTCA 59.599 50.000 0.00 0.00 45.15 3.41
57 58 1.005097 TCCAAGGCTTCATGCACTCAT 59.995 47.619 0.00 0.00 45.15 2.90
58 59 1.822990 CCAAGGCTTCATGCACTCATT 59.177 47.619 0.00 0.00 45.15 2.57
59 60 3.018856 CCAAGGCTTCATGCACTCATTA 58.981 45.455 0.00 0.00 45.15 1.90
60 61 3.635373 CCAAGGCTTCATGCACTCATTAT 59.365 43.478 0.00 0.00 45.15 1.28
61 62 4.499188 CCAAGGCTTCATGCACTCATTATG 60.499 45.833 0.00 0.00 45.15 1.90
62 63 3.220110 AGGCTTCATGCACTCATTATGG 58.780 45.455 0.00 0.00 45.15 2.74
63 64 2.954318 GGCTTCATGCACTCATTATGGT 59.046 45.455 0.00 0.00 45.15 3.55
64 65 3.243301 GGCTTCATGCACTCATTATGGTG 60.243 47.826 8.69 8.69 45.15 4.17
65 66 3.243301 GCTTCATGCACTCATTATGGTGG 60.243 47.826 13.01 0.00 42.31 4.61
66 67 2.300433 TCATGCACTCATTATGGTGGC 58.700 47.619 13.01 6.12 34.41 5.01
67 68 2.092267 TCATGCACTCATTATGGTGGCT 60.092 45.455 13.01 0.00 34.41 4.75
68 69 2.512692 TGCACTCATTATGGTGGCTT 57.487 45.000 13.01 0.00 34.41 4.35
69 70 2.368439 TGCACTCATTATGGTGGCTTC 58.632 47.619 13.01 1.45 34.41 3.86
70 71 2.290832 TGCACTCATTATGGTGGCTTCA 60.291 45.455 13.01 3.37 34.41 3.02
71 72 2.754552 GCACTCATTATGGTGGCTTCAA 59.245 45.455 13.01 0.00 34.41 2.69
72 73 3.193267 GCACTCATTATGGTGGCTTCAAA 59.807 43.478 13.01 0.00 34.41 2.69
73 74 4.676196 GCACTCATTATGGTGGCTTCAAAG 60.676 45.833 13.01 0.00 34.41 2.77
74 75 4.460382 CACTCATTATGGTGGCTTCAAAGT 59.540 41.667 6.10 0.00 0.00 2.66
75 76 4.702131 ACTCATTATGGTGGCTTCAAAGTC 59.298 41.667 0.00 0.00 0.00 3.01
76 77 4.016444 TCATTATGGTGGCTTCAAAGTCC 58.984 43.478 0.00 0.00 0.00 3.85
77 78 3.806949 TTATGGTGGCTTCAAAGTCCT 57.193 42.857 0.00 0.00 0.00 3.85
78 79 1.915141 ATGGTGGCTTCAAAGTCCTG 58.085 50.000 0.00 0.00 0.00 3.86
79 80 0.178992 TGGTGGCTTCAAAGTCCTGG 60.179 55.000 0.00 0.00 0.00 4.45
80 81 0.110486 GGTGGCTTCAAAGTCCTGGA 59.890 55.000 0.00 0.00 0.00 3.86
81 82 1.478654 GGTGGCTTCAAAGTCCTGGAA 60.479 52.381 0.00 0.00 0.00 3.53
82 83 2.519013 GTGGCTTCAAAGTCCTGGAAT 58.481 47.619 0.00 0.00 0.00 3.01
83 84 2.489722 GTGGCTTCAAAGTCCTGGAATC 59.510 50.000 0.00 0.00 0.00 2.52
84 85 2.108075 TGGCTTCAAAGTCCTGGAATCA 59.892 45.455 0.00 0.00 0.00 2.57
85 86 3.245371 TGGCTTCAAAGTCCTGGAATCAT 60.245 43.478 0.00 0.00 0.00 2.45
86 87 3.379688 GGCTTCAAAGTCCTGGAATCATC 59.620 47.826 0.00 0.00 0.00 2.92
87 88 4.012374 GCTTCAAAGTCCTGGAATCATCA 58.988 43.478 0.00 0.00 0.00 3.07
88 89 4.142513 GCTTCAAAGTCCTGGAATCATCAC 60.143 45.833 0.00 0.00 0.00 3.06
89 90 4.916041 TCAAAGTCCTGGAATCATCACT 57.084 40.909 0.00 0.00 0.00 3.41
90 91 5.246981 TCAAAGTCCTGGAATCATCACTT 57.753 39.130 0.00 0.00 0.00 3.16
91 92 5.005740 TCAAAGTCCTGGAATCATCACTTG 58.994 41.667 0.00 0.00 29.97 3.16
92 93 4.647564 AAGTCCTGGAATCATCACTTGT 57.352 40.909 0.00 0.00 0.00 3.16
93 94 5.762179 AAGTCCTGGAATCATCACTTGTA 57.238 39.130 0.00 0.00 0.00 2.41
94 95 5.762179 AGTCCTGGAATCATCACTTGTAA 57.238 39.130 0.00 0.00 0.00 2.41
95 96 5.491982 AGTCCTGGAATCATCACTTGTAAC 58.508 41.667 0.00 0.00 0.00 2.50
96 97 5.249393 AGTCCTGGAATCATCACTTGTAACT 59.751 40.000 0.00 0.00 0.00 2.24
97 98 5.582665 GTCCTGGAATCATCACTTGTAACTC 59.417 44.000 0.00 0.00 0.00 3.01
98 99 4.878397 CCTGGAATCATCACTTGTAACTCC 59.122 45.833 0.00 0.00 0.00 3.85
99 100 4.503910 TGGAATCATCACTTGTAACTCCG 58.496 43.478 0.00 0.00 0.00 4.63
100 101 4.020573 TGGAATCATCACTTGTAACTCCGT 60.021 41.667 0.00 0.00 0.00 4.69
101 102 4.935808 GGAATCATCACTTGTAACTCCGTT 59.064 41.667 0.00 0.00 0.00 4.44
102 103 5.063564 GGAATCATCACTTGTAACTCCGTTC 59.936 44.000 0.00 0.00 0.00 3.95
103 104 4.866508 TCATCACTTGTAACTCCGTTCT 57.133 40.909 0.00 0.00 0.00 3.01
104 105 5.209818 TCATCACTTGTAACTCCGTTCTT 57.790 39.130 0.00 0.00 0.00 2.52
105 106 4.988540 TCATCACTTGTAACTCCGTTCTTG 59.011 41.667 0.00 0.00 0.00 3.02
106 107 4.395959 TCACTTGTAACTCCGTTCTTGT 57.604 40.909 0.00 0.00 0.00 3.16
107 108 4.761975 TCACTTGTAACTCCGTTCTTGTT 58.238 39.130 0.00 0.00 0.00 2.83
108 109 4.807304 TCACTTGTAACTCCGTTCTTGTTC 59.193 41.667 0.00 0.00 0.00 3.18
109 110 4.809426 CACTTGTAACTCCGTTCTTGTTCT 59.191 41.667 0.00 0.00 0.00 3.01
110 111 5.048507 ACTTGTAACTCCGTTCTTGTTCTC 58.951 41.667 0.00 0.00 0.00 2.87
111 112 3.986277 TGTAACTCCGTTCTTGTTCTCC 58.014 45.455 0.00 0.00 0.00 3.71
112 113 3.640029 TGTAACTCCGTTCTTGTTCTCCT 59.360 43.478 0.00 0.00 0.00 3.69
113 114 3.840124 AACTCCGTTCTTGTTCTCCTT 57.160 42.857 0.00 0.00 0.00 3.36
114 115 3.113260 ACTCCGTTCTTGTTCTCCTTG 57.887 47.619 0.00 0.00 0.00 3.61
115 116 1.801178 CTCCGTTCTTGTTCTCCTTGC 59.199 52.381 0.00 0.00 0.00 4.01
116 117 1.140052 TCCGTTCTTGTTCTCCTTGCA 59.860 47.619 0.00 0.00 0.00 4.08
117 118 1.264288 CCGTTCTTGTTCTCCTTGCAC 59.736 52.381 0.00 0.00 0.00 4.57
118 119 1.939934 CGTTCTTGTTCTCCTTGCACA 59.060 47.619 0.00 0.00 0.00 4.57
119 120 2.549754 CGTTCTTGTTCTCCTTGCACAT 59.450 45.455 0.00 0.00 0.00 3.21
120 121 3.607775 CGTTCTTGTTCTCCTTGCACATG 60.608 47.826 0.00 0.00 0.00 3.21
121 122 1.881973 TCTTGTTCTCCTTGCACATGC 59.118 47.619 0.00 0.00 42.50 4.06
122 123 0.961019 TTGTTCTCCTTGCACATGCC 59.039 50.000 0.49 0.00 41.18 4.40
123 124 0.178995 TGTTCTCCTTGCACATGCCA 60.179 50.000 0.49 0.00 41.18 4.92
124 125 1.180029 GTTCTCCTTGCACATGCCAT 58.820 50.000 0.49 0.00 41.18 4.40
125 126 1.133790 GTTCTCCTTGCACATGCCATC 59.866 52.381 0.49 0.00 41.18 3.51
126 127 0.328926 TCTCCTTGCACATGCCATCA 59.671 50.000 0.49 0.00 41.18 3.07
127 128 1.064240 TCTCCTTGCACATGCCATCAT 60.064 47.619 0.49 0.00 41.18 2.45
128 129 1.337071 CTCCTTGCACATGCCATCATC 59.663 52.381 0.49 0.00 41.18 2.92
129 130 1.064240 TCCTTGCACATGCCATCATCT 60.064 47.619 0.49 0.00 41.18 2.90
130 131 1.337071 CCTTGCACATGCCATCATCTC 59.663 52.381 0.49 0.00 41.18 2.75
131 132 1.337071 CTTGCACATGCCATCATCTCC 59.663 52.381 0.49 0.00 41.18 3.71
132 133 0.256464 TGCACATGCCATCATCTCCA 59.744 50.000 0.49 0.00 41.18 3.86
133 134 1.133606 TGCACATGCCATCATCTCCAT 60.134 47.619 0.49 0.00 41.18 3.41
134 135 1.269723 GCACATGCCATCATCTCCATG 59.730 52.381 0.00 0.00 40.54 3.66
135 136 1.269723 CACATGCCATCATCTCCATGC 59.730 52.381 0.00 0.00 38.83 4.06
136 137 1.145119 ACATGCCATCATCTCCATGCT 59.855 47.619 0.00 0.00 38.83 3.79
137 138 2.239400 CATGCCATCATCTCCATGCTT 58.761 47.619 0.00 0.00 0.00 3.91
138 139 1.687563 TGCCATCATCTCCATGCTTG 58.312 50.000 0.00 0.00 0.00 4.01
139 140 1.213430 TGCCATCATCTCCATGCTTGA 59.787 47.619 0.22 0.00 0.00 3.02
140 141 2.304092 GCCATCATCTCCATGCTTGAA 58.696 47.619 0.22 0.00 0.00 2.69
141 142 2.034305 GCCATCATCTCCATGCTTGAAC 59.966 50.000 0.22 0.00 0.00 3.18
142 143 3.552875 CCATCATCTCCATGCTTGAACT 58.447 45.455 0.22 0.00 0.00 3.01
143 144 3.952323 CCATCATCTCCATGCTTGAACTT 59.048 43.478 0.22 0.00 0.00 2.66
144 145 4.401519 CCATCATCTCCATGCTTGAACTTT 59.598 41.667 0.22 0.00 0.00 2.66
145 146 5.450137 CCATCATCTCCATGCTTGAACTTTC 60.450 44.000 0.22 0.00 0.00 2.62
146 147 4.914983 TCATCTCCATGCTTGAACTTTCT 58.085 39.130 0.22 0.00 0.00 2.52
147 148 4.940046 TCATCTCCATGCTTGAACTTTCTC 59.060 41.667 0.22 0.00 0.00 2.87
148 149 3.679389 TCTCCATGCTTGAACTTTCTCC 58.321 45.455 0.22 0.00 0.00 3.71
149 150 3.072915 TCTCCATGCTTGAACTTTCTCCA 59.927 43.478 0.22 0.00 0.00 3.86
150 151 3.822735 CTCCATGCTTGAACTTTCTCCAA 59.177 43.478 0.22 0.00 0.00 3.53
151 152 3.822735 TCCATGCTTGAACTTTCTCCAAG 59.177 43.478 0.22 0.00 40.00 3.61
152 153 3.057033 CCATGCTTGAACTTTCTCCAAGG 60.057 47.826 0.22 0.00 38.11 3.61
153 154 3.297134 TGCTTGAACTTTCTCCAAGGT 57.703 42.857 0.00 0.00 38.11 3.50
154 155 3.631250 TGCTTGAACTTTCTCCAAGGTT 58.369 40.909 0.00 0.00 38.11 3.50
155 156 3.632145 TGCTTGAACTTTCTCCAAGGTTC 59.368 43.478 0.00 3.45 44.89 3.62
161 162 6.641169 GAACTTTCTCCAAGGTTCATCTTT 57.359 37.500 5.18 0.00 44.34 2.52
162 163 6.641169 AACTTTCTCCAAGGTTCATCTTTC 57.359 37.500 0.00 0.00 36.72 2.62
163 164 5.946486 ACTTTCTCCAAGGTTCATCTTTCT 58.054 37.500 0.00 0.00 36.72 2.52
164 165 6.368805 ACTTTCTCCAAGGTTCATCTTTCTT 58.631 36.000 0.00 0.00 36.72 2.52
165 166 6.264067 ACTTTCTCCAAGGTTCATCTTTCTTG 59.736 38.462 0.00 0.00 36.72 3.02
166 167 5.310409 TCTCCAAGGTTCATCTTTCTTGT 57.690 39.130 0.00 0.00 35.98 3.16
167 168 5.308825 TCTCCAAGGTTCATCTTTCTTGTC 58.691 41.667 0.00 0.00 35.98 3.18
168 169 4.398319 TCCAAGGTTCATCTTTCTTGTCC 58.602 43.478 0.00 0.00 35.98 4.02
169 170 4.141274 TCCAAGGTTCATCTTTCTTGTCCA 60.141 41.667 0.00 0.00 35.98 4.02
170 171 4.584325 CCAAGGTTCATCTTTCTTGTCCAA 59.416 41.667 0.00 0.00 35.98 3.53
171 172 5.278660 CCAAGGTTCATCTTTCTTGTCCAAG 60.279 44.000 0.47 0.47 39.71 3.61
172 173 3.823304 AGGTTCATCTTTCTTGTCCAAGC 59.177 43.478 2.09 0.00 38.28 4.01
173 174 3.823304 GGTTCATCTTTCTTGTCCAAGCT 59.177 43.478 2.09 0.00 38.28 3.74
174 175 5.003804 GGTTCATCTTTCTTGTCCAAGCTA 58.996 41.667 2.09 0.00 38.28 3.32
175 176 5.123027 GGTTCATCTTTCTTGTCCAAGCTAG 59.877 44.000 2.09 2.83 38.28 3.42
176 177 4.836825 TCATCTTTCTTGTCCAAGCTAGG 58.163 43.478 2.09 0.00 38.28 3.02
177 178 3.059352 TCTTTCTTGTCCAAGCTAGGC 57.941 47.619 2.09 0.00 38.28 3.93
178 179 2.087646 CTTTCTTGTCCAAGCTAGGCC 58.912 52.381 0.00 0.00 38.28 5.19
179 180 0.328258 TTCTTGTCCAAGCTAGGCCC 59.672 55.000 0.00 0.00 38.28 5.80
180 181 0.547712 TCTTGTCCAAGCTAGGCCCT 60.548 55.000 0.00 0.00 38.28 5.19
181 182 0.329596 CTTGTCCAAGCTAGGCCCTT 59.670 55.000 0.00 0.00 0.00 3.95
182 183 0.328258 TTGTCCAAGCTAGGCCCTTC 59.672 55.000 0.00 0.00 0.00 3.46
183 184 0.840288 TGTCCAAGCTAGGCCCTTCA 60.840 55.000 0.00 0.00 0.00 3.02
184 185 0.548510 GTCCAAGCTAGGCCCTTCAT 59.451 55.000 0.00 0.00 0.00 2.57
185 186 1.064389 GTCCAAGCTAGGCCCTTCATT 60.064 52.381 0.00 0.00 0.00 2.57
186 187 1.640670 TCCAAGCTAGGCCCTTCATTT 59.359 47.619 0.00 0.00 0.00 2.32
187 188 1.753073 CCAAGCTAGGCCCTTCATTTG 59.247 52.381 0.00 0.00 0.00 2.32
188 189 2.450476 CAAGCTAGGCCCTTCATTTGT 58.550 47.619 0.00 0.00 0.00 2.83
189 190 3.620488 CAAGCTAGGCCCTTCATTTGTA 58.380 45.455 0.00 0.00 0.00 2.41
190 191 4.016444 CAAGCTAGGCCCTTCATTTGTAA 58.984 43.478 0.00 0.00 0.00 2.41
191 192 3.891049 AGCTAGGCCCTTCATTTGTAAG 58.109 45.455 0.00 0.00 0.00 2.34
192 193 2.359214 GCTAGGCCCTTCATTTGTAAGC 59.641 50.000 0.00 0.00 0.00 3.09
193 194 2.603075 AGGCCCTTCATTTGTAAGCA 57.397 45.000 0.00 0.00 0.00 3.91
194 195 2.888212 AGGCCCTTCATTTGTAAGCAA 58.112 42.857 0.00 0.00 0.00 3.91
196 197 3.645687 AGGCCCTTCATTTGTAAGCAAAA 59.354 39.130 0.00 0.00 46.23 2.44
197 198 3.745975 GGCCCTTCATTTGTAAGCAAAAC 59.254 43.478 0.00 0.00 46.23 2.43
198 199 4.376146 GCCCTTCATTTGTAAGCAAAACA 58.624 39.130 0.00 0.00 46.23 2.83
199 200 4.813697 GCCCTTCATTTGTAAGCAAAACAA 59.186 37.500 0.00 0.00 46.23 2.83
209 210 8.948631 TTTGTAAGCAAAACAAATGTATCCAA 57.051 26.923 7.05 0.00 40.83 3.53
210 211 9.553064 TTTGTAAGCAAAACAAATGTATCCAAT 57.447 25.926 7.05 0.00 40.83 3.16
211 212 9.553064 TTGTAAGCAAAACAAATGTATCCAATT 57.447 25.926 0.00 0.00 34.04 2.32
212 213 9.553064 TGTAAGCAAAACAAATGTATCCAATTT 57.447 25.926 0.00 0.00 0.00 1.82
215 216 8.776376 AGCAAAACAAATGTATCCAATTTAGG 57.224 30.769 0.00 0.00 0.00 2.69
216 217 7.334171 AGCAAAACAAATGTATCCAATTTAGGC 59.666 33.333 0.00 0.00 0.00 3.93
217 218 7.118971 GCAAAACAAATGTATCCAATTTAGGCA 59.881 33.333 0.00 0.00 0.00 4.75
218 219 9.165035 CAAAACAAATGTATCCAATTTAGGCAT 57.835 29.630 0.00 0.00 0.00 4.40
219 220 8.947055 AAACAAATGTATCCAATTTAGGCATC 57.053 30.769 0.00 0.00 0.00 3.91
220 221 7.658525 ACAAATGTATCCAATTTAGGCATCA 57.341 32.000 0.00 0.00 0.00 3.07
221 222 8.253867 ACAAATGTATCCAATTTAGGCATCAT 57.746 30.769 0.00 0.00 0.00 2.45
222 223 8.362639 ACAAATGTATCCAATTTAGGCATCATC 58.637 33.333 0.00 0.00 0.00 2.92
223 224 8.361889 CAAATGTATCCAATTTAGGCATCATCA 58.638 33.333 0.00 0.00 0.00 3.07
224 225 8.660295 AATGTATCCAATTTAGGCATCATCAT 57.340 30.769 0.00 0.00 0.00 2.45
225 226 9.758021 AATGTATCCAATTTAGGCATCATCATA 57.242 29.630 0.00 0.00 0.00 2.15
226 227 9.931698 ATGTATCCAATTTAGGCATCATCATAT 57.068 29.630 0.00 0.00 0.00 1.78
227 228 9.758021 TGTATCCAATTTAGGCATCATCATATT 57.242 29.630 0.00 0.00 0.00 1.28
230 231 8.571461 TCCAATTTAGGCATCATCATATTCTC 57.429 34.615 0.00 0.00 0.00 2.87
231 232 8.165397 TCCAATTTAGGCATCATCATATTCTCA 58.835 33.333 0.00 0.00 0.00 3.27
232 233 8.967918 CCAATTTAGGCATCATCATATTCTCAT 58.032 33.333 0.00 0.00 0.00 2.90
233 234 9.788960 CAATTTAGGCATCATCATATTCTCATG 57.211 33.333 0.00 0.00 0.00 3.07
234 235 9.749340 AATTTAGGCATCATCATATTCTCATGA 57.251 29.630 0.00 0.00 39.20 3.07
235 236 9.749340 ATTTAGGCATCATCATATTCTCATGAA 57.251 29.630 0.00 0.00 38.39 2.57
236 237 8.557592 TTAGGCATCATCATATTCTCATGAAC 57.442 34.615 0.00 0.00 38.39 3.18
237 238 6.540083 AGGCATCATCATATTCTCATGAACA 58.460 36.000 0.00 0.00 38.39 3.18
238 239 7.175797 AGGCATCATCATATTCTCATGAACAT 58.824 34.615 0.00 0.00 38.39 2.71
239 240 7.670140 AGGCATCATCATATTCTCATGAACATT 59.330 33.333 0.00 0.00 38.39 2.71
240 241 8.953313 GGCATCATCATATTCTCATGAACATTA 58.047 33.333 0.00 0.00 38.39 1.90
241 242 9.989869 GCATCATCATATTCTCATGAACATTAG 57.010 33.333 0.00 0.00 38.39 1.73
252 253 9.513906 TTCTCATGAACATTAGAATTGTTACCA 57.486 29.630 0.00 0.00 29.04 3.25
253 254 9.513906 TCTCATGAACATTAGAATTGTTACCAA 57.486 29.630 0.00 0.00 34.45 3.67
254 255 9.778993 CTCATGAACATTAGAATTGTTACCAAG 57.221 33.333 0.00 0.00 33.17 3.61
255 256 9.513906 TCATGAACATTAGAATTGTTACCAAGA 57.486 29.630 0.00 0.00 33.17 3.02
258 259 9.959749 TGAACATTAGAATTGTTACCAAGAAAC 57.040 29.630 0.00 0.00 33.17 2.78
259 260 9.113876 GAACATTAGAATTGTTACCAAGAAACG 57.886 33.333 0.00 0.00 33.17 3.60
260 261 8.385898 ACATTAGAATTGTTACCAAGAAACGA 57.614 30.769 0.00 0.00 33.17 3.85
261 262 8.842280 ACATTAGAATTGTTACCAAGAAACGAA 58.158 29.630 0.00 0.00 33.17 3.85
262 263 9.672086 CATTAGAATTGTTACCAAGAAACGAAA 57.328 29.630 0.00 0.00 33.17 3.46
263 264 9.893305 ATTAGAATTGTTACCAAGAAACGAAAG 57.107 29.630 0.00 0.00 33.17 2.62
264 265 7.329588 AGAATTGTTACCAAGAAACGAAAGT 57.670 32.000 0.00 0.00 39.36 2.66
265 266 8.441312 AGAATTGTTACCAAGAAACGAAAGTA 57.559 30.769 0.00 0.00 37.39 2.24
266 267 8.340443 AGAATTGTTACCAAGAAACGAAAGTAC 58.660 33.333 0.00 0.00 37.39 2.73
267 268 6.962686 ATTGTTACCAAGAAACGAAAGTACC 58.037 36.000 0.00 0.00 37.39 3.34
268 269 6.769341 ATTGTTACCAAGAAACGAAAGTACCT 59.231 34.615 0.00 0.00 37.39 3.08
269 270 7.255001 ATTGTTACCAAGAAACGAAAGTACCTG 60.255 37.037 0.00 0.00 37.39 4.00
282 283 7.985476 ACGAAAGTACCTGATAATTCAATTGG 58.015 34.615 5.42 0.00 46.88 3.16
283 284 6.912591 CGAAAGTACCTGATAATTCAATTGGC 59.087 38.462 5.42 0.00 0.00 4.52
284 285 6.377327 AAGTACCTGATAATTCAATTGGCG 57.623 37.500 5.42 0.00 0.00 5.69
285 286 5.437060 AGTACCTGATAATTCAATTGGCGT 58.563 37.500 5.42 0.00 0.00 5.68
286 287 4.637483 ACCTGATAATTCAATTGGCGTG 57.363 40.909 5.42 0.00 0.00 5.34
287 288 3.181487 ACCTGATAATTCAATTGGCGTGC 60.181 43.478 5.42 0.00 0.00 5.34
288 289 3.038017 CTGATAATTCAATTGGCGTGCG 58.962 45.455 5.42 0.00 0.00 5.34
289 290 1.780860 GATAATTCAATTGGCGTGCGC 59.219 47.619 8.17 8.17 41.06 6.09
290 291 0.522286 TAATTCAATTGGCGTGCGCG 60.522 50.000 16.86 16.86 43.06 6.86
291 292 2.193865 AATTCAATTGGCGTGCGCGA 62.194 50.000 26.19 2.13 43.06 5.87
292 293 2.582202 ATTCAATTGGCGTGCGCGAG 62.582 55.000 26.19 0.19 43.06 5.03
306 307 2.493713 CGCGAGCTCTAGTAATTGGT 57.506 50.000 12.85 0.00 0.00 3.67
307 308 2.386249 CGCGAGCTCTAGTAATTGGTC 58.614 52.381 12.85 0.00 0.00 4.02
308 309 2.745102 GCGAGCTCTAGTAATTGGTCC 58.255 52.381 12.85 0.00 0.00 4.46
309 310 2.100916 GCGAGCTCTAGTAATTGGTCCA 59.899 50.000 12.85 0.00 0.00 4.02
310 311 3.797184 GCGAGCTCTAGTAATTGGTCCAG 60.797 52.174 12.85 0.00 0.00 3.86
311 312 3.381908 CGAGCTCTAGTAATTGGTCCAGT 59.618 47.826 12.85 0.00 0.00 4.00
312 313 4.579340 CGAGCTCTAGTAATTGGTCCAGTA 59.421 45.833 12.85 0.00 0.00 2.74
313 314 5.241949 CGAGCTCTAGTAATTGGTCCAGTAT 59.758 44.000 12.85 0.00 0.00 2.12
314 315 6.412362 AGCTCTAGTAATTGGTCCAGTATG 57.588 41.667 0.00 0.00 0.00 2.39
315 316 5.900123 AGCTCTAGTAATTGGTCCAGTATGT 59.100 40.000 0.00 0.00 0.00 2.29
316 317 7.067421 AGCTCTAGTAATTGGTCCAGTATGTA 58.933 38.462 0.00 0.00 0.00 2.29
317 318 7.730784 AGCTCTAGTAATTGGTCCAGTATGTAT 59.269 37.037 0.00 0.00 0.00 2.29
318 319 9.021807 GCTCTAGTAATTGGTCCAGTATGTATA 57.978 37.037 0.00 0.00 0.00 1.47
320 321 9.021807 TCTAGTAATTGGTCCAGTATGTATAGC 57.978 37.037 0.00 0.00 0.00 2.97
321 322 7.612065 AGTAATTGGTCCAGTATGTATAGCA 57.388 36.000 0.00 0.00 0.00 3.49
322 323 7.671302 AGTAATTGGTCCAGTATGTATAGCAG 58.329 38.462 0.00 0.00 0.00 4.24
323 324 4.336889 TTGGTCCAGTATGTATAGCAGC 57.663 45.455 0.00 0.00 0.00 5.25
324 325 3.304829 TGGTCCAGTATGTATAGCAGCA 58.695 45.455 0.00 0.00 0.00 4.41
325 326 3.321968 TGGTCCAGTATGTATAGCAGCAG 59.678 47.826 0.00 0.00 0.00 4.24
326 327 3.306364 GGTCCAGTATGTATAGCAGCAGG 60.306 52.174 0.00 0.00 0.00 4.85
327 328 2.899900 TCCAGTATGTATAGCAGCAGGG 59.100 50.000 0.00 0.00 0.00 4.45
328 329 2.027745 CCAGTATGTATAGCAGCAGGGG 60.028 54.545 0.00 0.00 0.00 4.79
329 330 1.625818 AGTATGTATAGCAGCAGGGGC 59.374 52.381 0.00 0.00 41.61 5.80
339 340 3.646715 GCAGGGGCTGTGGGTGTA 61.647 66.667 0.00 0.00 36.96 2.90
340 341 3.166434 CAGGGGCTGTGGGTGTAA 58.834 61.111 0.00 0.00 0.00 2.41
341 342 1.303317 CAGGGGCTGTGGGTGTAAC 60.303 63.158 0.00 0.00 0.00 2.50
342 343 1.772567 AGGGGCTGTGGGTGTAACA 60.773 57.895 0.00 0.00 39.98 2.41
343 344 1.151908 GGGGCTGTGGGTGTAACAA 59.848 57.895 0.00 0.00 39.98 2.83
344 345 0.251608 GGGGCTGTGGGTGTAACAAT 60.252 55.000 0.00 0.00 39.98 2.71
345 346 0.887933 GGGCTGTGGGTGTAACAATG 59.112 55.000 0.00 0.00 39.98 2.82
346 347 0.887933 GGCTGTGGGTGTAACAATGG 59.112 55.000 0.00 0.00 39.98 3.16
347 348 1.616159 GCTGTGGGTGTAACAATGGT 58.384 50.000 0.00 0.00 39.98 3.55
348 349 2.553466 GGCTGTGGGTGTAACAATGGTA 60.553 50.000 0.00 0.00 39.98 3.25
349 350 3.352648 GCTGTGGGTGTAACAATGGTAT 58.647 45.455 0.00 0.00 39.98 2.73
350 351 3.761752 GCTGTGGGTGTAACAATGGTATT 59.238 43.478 0.00 0.00 39.98 1.89
351 352 4.142469 GCTGTGGGTGTAACAATGGTATTC 60.142 45.833 0.00 0.00 39.98 1.75
352 353 4.986783 TGTGGGTGTAACAATGGTATTCA 58.013 39.130 0.00 0.00 39.98 2.57
353 354 5.575157 TGTGGGTGTAACAATGGTATTCAT 58.425 37.500 0.00 0.00 39.98 2.57
354 355 5.417266 TGTGGGTGTAACAATGGTATTCATG 59.583 40.000 0.00 0.00 39.98 3.07
355 356 5.417580 GTGGGTGTAACAATGGTATTCATGT 59.582 40.000 0.00 0.00 39.98 3.21
356 357 5.650266 TGGGTGTAACAATGGTATTCATGTC 59.350 40.000 0.00 0.00 39.98 3.06
357 358 5.067283 GGGTGTAACAATGGTATTCATGTCC 59.933 44.000 0.00 0.00 39.98 4.02
358 359 5.885912 GGTGTAACAATGGTATTCATGTCCT 59.114 40.000 0.00 0.00 39.98 3.85
359 360 6.038271 GGTGTAACAATGGTATTCATGTCCTC 59.962 42.308 0.00 0.00 39.98 3.71
360 361 6.597672 GTGTAACAATGGTATTCATGTCCTCA 59.402 38.462 0.00 0.00 35.99 3.86
361 362 7.283127 GTGTAACAATGGTATTCATGTCCTCAT 59.717 37.037 0.00 0.00 35.99 2.90
362 363 6.949352 AACAATGGTATTCATGTCCTCATC 57.051 37.500 0.00 0.00 35.99 2.92
363 364 6.005066 ACAATGGTATTCATGTCCTCATCA 57.995 37.500 0.00 0.00 35.99 3.07
364 365 6.425735 ACAATGGTATTCATGTCCTCATCAA 58.574 36.000 0.00 0.00 35.99 2.57
365 366 6.544931 ACAATGGTATTCATGTCCTCATCAAG 59.455 38.462 0.00 0.00 35.99 3.02
366 367 5.698741 TGGTATTCATGTCCTCATCAAGT 57.301 39.130 0.00 0.00 31.15 3.16
367 368 6.806668 TGGTATTCATGTCCTCATCAAGTA 57.193 37.500 0.00 0.00 31.15 2.24
368 369 7.194112 TGGTATTCATGTCCTCATCAAGTAA 57.806 36.000 0.00 0.00 31.15 2.24
369 370 7.047891 TGGTATTCATGTCCTCATCAAGTAAC 58.952 38.462 0.00 0.00 31.15 2.50
370 371 7.092891 TGGTATTCATGTCCTCATCAAGTAACT 60.093 37.037 0.00 0.00 31.15 2.24
371 372 7.225538 GGTATTCATGTCCTCATCAAGTAACTG 59.774 40.741 0.00 0.00 31.15 3.16
372 373 4.507710 TCATGTCCTCATCAAGTAACTGC 58.492 43.478 0.00 0.00 31.15 4.40
373 374 3.334583 TGTCCTCATCAAGTAACTGCC 57.665 47.619 0.00 0.00 0.00 4.85
374 375 2.271800 GTCCTCATCAAGTAACTGCCG 58.728 52.381 0.00 0.00 0.00 5.69
375 376 1.009829 CCTCATCAAGTAACTGCCGC 58.990 55.000 0.00 0.00 0.00 6.53
376 377 0.647410 CTCATCAAGTAACTGCCGCG 59.353 55.000 0.00 0.00 0.00 6.46
377 378 0.037697 TCATCAAGTAACTGCCGCGT 60.038 50.000 4.92 0.00 0.00 6.01
378 379 1.202817 TCATCAAGTAACTGCCGCGTA 59.797 47.619 4.92 0.00 0.00 4.42
379 380 1.996898 CATCAAGTAACTGCCGCGTAA 59.003 47.619 4.92 0.00 0.00 3.18
380 381 2.151881 TCAAGTAACTGCCGCGTAAA 57.848 45.000 4.92 0.00 0.00 2.01
381 382 2.063266 TCAAGTAACTGCCGCGTAAAG 58.937 47.619 4.92 1.42 0.00 1.85
382 383 1.796459 CAAGTAACTGCCGCGTAAAGT 59.204 47.619 4.92 2.15 0.00 2.66
383 384 1.706443 AGTAACTGCCGCGTAAAGTC 58.294 50.000 4.92 0.00 0.00 3.01
384 385 1.271656 AGTAACTGCCGCGTAAAGTCT 59.728 47.619 4.92 0.00 0.00 3.24
385 386 1.389106 GTAACTGCCGCGTAAAGTCTG 59.611 52.381 4.92 0.00 0.00 3.51
386 387 0.032952 AACTGCCGCGTAAAGTCTGA 59.967 50.000 4.92 0.00 0.00 3.27
387 388 0.666577 ACTGCCGCGTAAAGTCTGAC 60.667 55.000 4.92 0.00 0.00 3.51
388 389 1.674611 CTGCCGCGTAAAGTCTGACG 61.675 60.000 4.92 3.70 41.97 4.35
389 390 1.731969 GCCGCGTAAAGTCTGACGT 60.732 57.895 4.92 0.00 41.13 4.34
390 391 0.454957 GCCGCGTAAAGTCTGACGTA 60.455 55.000 4.92 0.00 41.13 3.57
391 392 1.531912 CCGCGTAAAGTCTGACGTAG 58.468 55.000 4.92 4.62 41.13 3.51
410 411 6.011277 ACGTAGTTCGAAAATAAAATGACGC 58.989 36.000 0.00 0.00 37.78 5.19
411 412 6.010675 CGTAGTTCGAAAATAAAATGACGCA 58.989 36.000 0.00 0.00 42.86 5.24
412 413 6.681178 CGTAGTTCGAAAATAAAATGACGCAT 59.319 34.615 0.00 0.00 42.86 4.73
413 414 6.853279 AGTTCGAAAATAAAATGACGCATG 57.147 33.333 0.00 0.00 0.00 4.06
414 415 5.286082 AGTTCGAAAATAAAATGACGCATGC 59.714 36.000 7.91 7.91 0.00 4.06
415 416 4.727475 TCGAAAATAAAATGACGCATGCA 58.273 34.783 19.57 0.00 0.00 3.96
416 417 5.339177 TCGAAAATAAAATGACGCATGCAT 58.661 33.333 19.57 0.36 0.00 3.96
417 418 5.229678 TCGAAAATAAAATGACGCATGCATG 59.770 36.000 22.70 22.70 0.00 4.06
418 419 5.004630 CGAAAATAAAATGACGCATGCATGT 59.995 36.000 26.79 9.13 0.00 3.21
419 420 6.196168 CGAAAATAAAATGACGCATGCATGTA 59.804 34.615 26.79 12.17 0.00 2.29
420 421 7.096518 CGAAAATAAAATGACGCATGCATGTAT 60.097 33.333 26.79 15.75 0.00 2.29
421 422 9.179552 GAAAATAAAATGACGCATGCATGTATA 57.820 29.630 26.79 12.16 0.00 1.47
422 423 9.695526 AAAATAAAATGACGCATGCATGTATAT 57.304 25.926 26.79 13.76 0.00 0.86
423 424 8.677871 AATAAAATGACGCATGCATGTATATG 57.322 30.769 26.79 14.25 37.36 1.78
424 425 5.945466 AAATGACGCATGCATGTATATGA 57.055 34.783 26.79 7.96 36.36 2.15
425 426 4.934075 ATGACGCATGCATGTATATGAC 57.066 40.909 26.79 12.70 36.36 3.06
426 427 3.726607 TGACGCATGCATGTATATGACA 58.273 40.909 26.79 14.76 43.97 3.58
427 428 3.494251 TGACGCATGCATGTATATGACAC 59.506 43.478 26.79 6.81 42.17 3.67
428 429 3.732212 ACGCATGCATGTATATGACACT 58.268 40.909 26.79 0.00 42.17 3.55
429 430 4.129380 ACGCATGCATGTATATGACACTT 58.871 39.130 26.79 0.00 42.17 3.16
430 431 4.024641 ACGCATGCATGTATATGACACTTG 60.025 41.667 26.79 0.00 42.17 3.16
431 432 4.612033 CGCATGCATGTATATGACACTTGG 60.612 45.833 26.79 0.00 42.17 3.61
432 433 4.276678 GCATGCATGTATATGACACTTGGT 59.723 41.667 26.79 0.00 42.17 3.67
433 434 5.754778 CATGCATGTATATGACACTTGGTG 58.245 41.667 18.91 0.00 42.17 4.17
434 435 3.627123 TGCATGTATATGACACTTGGTGC 59.373 43.478 3.28 0.00 42.17 5.01
435 436 3.879295 GCATGTATATGACACTTGGTGCT 59.121 43.478 3.28 0.00 42.17 4.40
436 437 4.024556 GCATGTATATGACACTTGGTGCTC 60.025 45.833 3.28 0.00 42.17 4.26
437 438 4.137116 TGTATATGACACTTGGTGCTCC 57.863 45.455 0.00 0.00 36.98 4.70
438 439 3.517500 TGTATATGACACTTGGTGCTCCA 59.482 43.478 2.64 2.64 36.98 3.86
439 440 3.939740 ATATGACACTTGGTGCTCCAT 57.060 42.857 8.61 0.00 43.91 3.41
440 441 1.830279 ATGACACTTGGTGCTCCATG 58.170 50.000 16.70 16.70 43.91 3.66
441 442 0.764271 TGACACTTGGTGCTCCATGA 59.236 50.000 23.14 3.60 43.91 3.07
442 443 1.142667 TGACACTTGGTGCTCCATGAA 59.857 47.619 23.14 2.91 43.91 2.57
443 444 2.229792 GACACTTGGTGCTCCATGAAA 58.770 47.619 23.14 2.56 43.91 2.69
444 445 2.227388 GACACTTGGTGCTCCATGAAAG 59.773 50.000 23.14 13.62 43.91 2.62
445 446 2.158623 ACACTTGGTGCTCCATGAAAGA 60.159 45.455 23.14 1.52 43.91 2.52
446 447 2.886523 CACTTGGTGCTCCATGAAAGAA 59.113 45.455 23.14 0.84 43.91 2.52
447 448 3.318839 CACTTGGTGCTCCATGAAAGAAA 59.681 43.478 23.14 0.15 43.91 2.52
448 449 3.960102 ACTTGGTGCTCCATGAAAGAAAA 59.040 39.130 23.14 0.00 43.91 2.29
449 450 4.590222 ACTTGGTGCTCCATGAAAGAAAAT 59.410 37.500 23.14 0.21 43.91 1.82
450 451 4.524316 TGGTGCTCCATGAAAGAAAATG 57.476 40.909 2.64 0.00 39.03 2.32
451 452 4.151121 TGGTGCTCCATGAAAGAAAATGA 58.849 39.130 2.64 0.00 39.03 2.57
452 453 4.219070 TGGTGCTCCATGAAAGAAAATGAG 59.781 41.667 2.64 0.00 39.03 2.90
453 454 4.381292 GGTGCTCCATGAAAGAAAATGAGG 60.381 45.833 0.00 0.00 0.00 3.86
454 455 4.219288 GTGCTCCATGAAAGAAAATGAGGT 59.781 41.667 0.00 0.00 0.00 3.85
455 456 5.415701 GTGCTCCATGAAAGAAAATGAGGTA 59.584 40.000 0.00 0.00 0.00 3.08
456 457 6.096001 GTGCTCCATGAAAGAAAATGAGGTAT 59.904 38.462 0.00 0.00 0.00 2.73
457 458 6.095860 TGCTCCATGAAAGAAAATGAGGTATG 59.904 38.462 0.00 0.00 0.00 2.39
458 459 6.096001 GCTCCATGAAAGAAAATGAGGTATGT 59.904 38.462 0.00 0.00 0.00 2.29
459 460 7.283127 GCTCCATGAAAGAAAATGAGGTATGTA 59.717 37.037 0.00 0.00 0.00 2.29
460 461 9.347240 CTCCATGAAAGAAAATGAGGTATGTAT 57.653 33.333 0.00 0.00 0.00 2.29
461 462 9.123902 TCCATGAAAGAAAATGAGGTATGTATG 57.876 33.333 0.00 0.00 0.00 2.39
462 463 8.906867 CCATGAAAGAAAATGAGGTATGTATGT 58.093 33.333 0.00 0.00 0.00 2.29
485 486 8.397575 TGTATGTTTTGTTTAGTTATGCTCCA 57.602 30.769 0.00 0.00 0.00 3.86
486 487 9.019656 TGTATGTTTTGTTTAGTTATGCTCCAT 57.980 29.630 0.00 0.00 0.00 3.41
487 488 9.855021 GTATGTTTTGTTTAGTTATGCTCCATT 57.145 29.630 0.00 0.00 0.00 3.16
489 490 9.777297 ATGTTTTGTTTAGTTATGCTCCATTTT 57.223 25.926 0.00 0.00 0.00 1.82
593 594 5.599751 AGGGTTAATTATCCTTTTGCCCTT 58.400 37.500 11.51 0.00 40.76 3.95
624 625 1.165907 TGTGCTCAGTTTTGCCCTCG 61.166 55.000 0.00 0.00 0.00 4.63
629 630 0.400213 TCAGTTTTGCCCTCGGATGT 59.600 50.000 0.00 0.00 0.00 3.06
736 737 1.785353 GCCCTTACAGGTGGGACCAA 61.785 60.000 1.75 0.00 46.15 3.67
773 774 6.949715 ACCAATTTTATTCAGACCATTGCAT 58.050 32.000 0.00 0.00 0.00 3.96
783 784 0.964860 ACCATTGCATGCGTGGCTTA 60.965 50.000 30.87 4.79 36.47 3.09
816 817 2.026636 AGAGAGCCGTTCAGTAGAGAGT 60.027 50.000 0.00 0.00 0.00 3.24
924 934 3.771160 CGGCGGTGGGAAGCTAGT 61.771 66.667 0.00 0.00 0.00 2.57
1411 1422 2.491693 ACTGACAGAGAGCTAGCTGTTC 59.508 50.000 24.99 18.86 44.77 3.18
1472 1483 3.343941 TCAAGCACTACCAATACCCAC 57.656 47.619 0.00 0.00 0.00 4.61
1513 1524 5.181245 GCATTTGTAGGTATGGTAATCGCAT 59.819 40.000 0.00 0.00 0.00 4.73
1849 1864 2.725203 TTCGGGGGTTCTCTTGCGTG 62.725 60.000 0.00 0.00 0.00 5.34
1900 1915 6.882610 TTAGGCAGTAAATCATAATGCTGG 57.117 37.500 7.67 0.00 38.42 4.85
1905 1920 6.183360 GGCAGTAAATCATAATGCTGGAACTT 60.183 38.462 7.67 0.00 38.42 2.66
1954 1969 6.252995 TCCAGAGCCAAACAATTAAGGTTAT 58.747 36.000 0.00 0.00 0.00 1.89
2284 2308 7.956328 AGGTATACATAGTGAGACTGTGAAA 57.044 36.000 5.01 0.00 39.34 2.69
2285 2309 8.362464 AGGTATACATAGTGAGACTGTGAAAA 57.638 34.615 5.01 0.00 39.34 2.29
2386 2411 4.140900 TGGAGGGTTGGAAGGTTGAAAATA 60.141 41.667 0.00 0.00 0.00 1.40
2468 2494 5.479027 GGCACTTGGTTTAGGATTTAAAGGA 59.521 40.000 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.695217 TGCCACTTCATAAATTTCGTCC 57.305 40.909 0.00 0.00 0.00 4.79
2 3 6.124088 AGATGCCACTTCATAAATTTCGTC 57.876 37.500 0.00 0.00 0.00 4.20
4 5 6.252015 CACAAGATGCCACTTCATAAATTTCG 59.748 38.462 0.00 0.00 0.00 3.46
5 6 7.092716 ACACAAGATGCCACTTCATAAATTTC 58.907 34.615 0.00 0.00 0.00 2.17
6 7 6.996509 ACACAAGATGCCACTTCATAAATTT 58.003 32.000 0.00 0.00 0.00 1.82
7 8 6.594788 ACACAAGATGCCACTTCATAAATT 57.405 33.333 0.00 0.00 0.00 1.82
8 9 6.886459 ACTACACAAGATGCCACTTCATAAAT 59.114 34.615 0.00 0.00 0.00 1.40
9 10 6.237901 ACTACACAAGATGCCACTTCATAAA 58.762 36.000 0.00 0.00 0.00 1.40
10 11 5.804639 ACTACACAAGATGCCACTTCATAA 58.195 37.500 0.00 0.00 0.00 1.90
11 12 5.420725 ACTACACAAGATGCCACTTCATA 57.579 39.130 0.00 0.00 0.00 2.15
12 13 4.292186 ACTACACAAGATGCCACTTCAT 57.708 40.909 0.00 0.00 0.00 2.57
13 14 3.769739 ACTACACAAGATGCCACTTCA 57.230 42.857 0.00 0.00 0.00 3.02
14 15 4.275936 ACAAACTACACAAGATGCCACTTC 59.724 41.667 0.00 0.00 0.00 3.01
15 16 4.207165 ACAAACTACACAAGATGCCACTT 58.793 39.130 0.00 0.00 0.00 3.16
16 17 3.815401 GACAAACTACACAAGATGCCACT 59.185 43.478 0.00 0.00 0.00 4.00
17 18 3.058224 GGACAAACTACACAAGATGCCAC 60.058 47.826 0.00 0.00 0.00 5.01
18 19 3.146066 GGACAAACTACACAAGATGCCA 58.854 45.455 0.00 0.00 0.00 4.92
19 20 3.146066 TGGACAAACTACACAAGATGCC 58.854 45.455 0.00 0.00 0.00 4.40
20 21 4.320494 CCTTGGACAAACTACACAAGATGC 60.320 45.833 0.00 0.00 40.60 3.91
21 22 4.320494 GCCTTGGACAAACTACACAAGATG 60.320 45.833 0.00 0.00 40.60 2.90
22 23 3.821033 GCCTTGGACAAACTACACAAGAT 59.179 43.478 0.00 0.00 40.60 2.40
23 24 3.118038 AGCCTTGGACAAACTACACAAGA 60.118 43.478 0.00 0.00 40.60 3.02
24 25 3.214328 AGCCTTGGACAAACTACACAAG 58.786 45.455 0.00 0.00 38.52 3.16
25 26 3.290948 AGCCTTGGACAAACTACACAA 57.709 42.857 0.00 0.00 0.00 3.33
26 27 3.211045 GAAGCCTTGGACAAACTACACA 58.789 45.455 0.00 0.00 0.00 3.72
27 28 3.211045 TGAAGCCTTGGACAAACTACAC 58.789 45.455 0.00 0.00 0.00 2.90
28 29 3.569194 TGAAGCCTTGGACAAACTACA 57.431 42.857 0.00 0.00 0.00 2.74
29 30 3.366374 GCATGAAGCCTTGGACAAACTAC 60.366 47.826 0.00 0.00 37.23 2.73
30 31 2.819608 GCATGAAGCCTTGGACAAACTA 59.180 45.455 0.00 0.00 37.23 2.24
31 32 1.615392 GCATGAAGCCTTGGACAAACT 59.385 47.619 0.00 0.00 37.23 2.66
32 33 1.340889 TGCATGAAGCCTTGGACAAAC 59.659 47.619 0.00 0.00 44.83 2.93
33 34 1.340889 GTGCATGAAGCCTTGGACAAA 59.659 47.619 0.00 0.00 44.83 2.83
34 35 0.961019 GTGCATGAAGCCTTGGACAA 59.039 50.000 0.00 0.00 44.83 3.18
35 36 0.111061 AGTGCATGAAGCCTTGGACA 59.889 50.000 0.00 0.00 44.83 4.02
36 37 0.807496 GAGTGCATGAAGCCTTGGAC 59.193 55.000 0.00 0.00 44.83 4.02
37 38 0.401356 TGAGTGCATGAAGCCTTGGA 59.599 50.000 0.00 0.00 44.83 3.53
38 39 1.471119 ATGAGTGCATGAAGCCTTGG 58.529 50.000 0.00 0.00 44.83 3.61
39 40 4.499188 CCATAATGAGTGCATGAAGCCTTG 60.499 45.833 0.00 0.00 44.83 3.61
40 41 3.635373 CCATAATGAGTGCATGAAGCCTT 59.365 43.478 0.00 0.00 44.83 4.35
41 42 3.220110 CCATAATGAGTGCATGAAGCCT 58.780 45.455 0.00 0.00 44.83 4.58
42 43 2.954318 ACCATAATGAGTGCATGAAGCC 59.046 45.455 0.00 0.00 44.83 4.35
43 44 3.243301 CCACCATAATGAGTGCATGAAGC 60.243 47.826 0.00 0.00 45.96 3.86
44 45 3.243301 GCCACCATAATGAGTGCATGAAG 60.243 47.826 0.00 0.00 34.26 3.02
45 46 2.689471 GCCACCATAATGAGTGCATGAA 59.311 45.455 0.00 0.00 34.26 2.57
46 47 2.092267 AGCCACCATAATGAGTGCATGA 60.092 45.455 0.00 0.00 34.26 3.07
47 48 2.304092 AGCCACCATAATGAGTGCATG 58.696 47.619 0.00 0.00 34.26 4.06
48 49 2.742428 AGCCACCATAATGAGTGCAT 57.258 45.000 0.00 0.00 35.92 3.96
49 50 2.290832 TGAAGCCACCATAATGAGTGCA 60.291 45.455 0.00 0.00 32.48 4.57
50 51 2.368439 TGAAGCCACCATAATGAGTGC 58.632 47.619 0.00 0.00 32.48 4.40
51 52 4.460382 ACTTTGAAGCCACCATAATGAGTG 59.540 41.667 0.00 0.00 0.00 3.51
52 53 4.666512 ACTTTGAAGCCACCATAATGAGT 58.333 39.130 0.00 0.00 0.00 3.41
53 54 4.096984 GGACTTTGAAGCCACCATAATGAG 59.903 45.833 0.00 0.00 0.00 2.90
54 55 4.016444 GGACTTTGAAGCCACCATAATGA 58.984 43.478 0.00 0.00 0.00 2.57
55 56 4.019174 AGGACTTTGAAGCCACCATAATG 58.981 43.478 0.00 0.00 0.00 1.90
56 57 4.019174 CAGGACTTTGAAGCCACCATAAT 58.981 43.478 0.00 0.00 0.00 1.28
57 58 3.420893 CAGGACTTTGAAGCCACCATAA 58.579 45.455 0.00 0.00 0.00 1.90
58 59 2.290896 CCAGGACTTTGAAGCCACCATA 60.291 50.000 0.00 0.00 0.00 2.74
59 60 1.548582 CCAGGACTTTGAAGCCACCAT 60.549 52.381 0.00 0.00 0.00 3.55
60 61 0.178992 CCAGGACTTTGAAGCCACCA 60.179 55.000 0.00 0.00 0.00 4.17
61 62 0.110486 TCCAGGACTTTGAAGCCACC 59.890 55.000 0.00 0.00 0.00 4.61
62 63 1.981256 TTCCAGGACTTTGAAGCCAC 58.019 50.000 0.00 0.00 0.00 5.01
63 64 2.108075 TGATTCCAGGACTTTGAAGCCA 59.892 45.455 0.00 0.00 0.00 4.75
64 65 2.795329 TGATTCCAGGACTTTGAAGCC 58.205 47.619 0.00 0.00 0.00 4.35
65 66 4.012374 TGATGATTCCAGGACTTTGAAGC 58.988 43.478 0.00 0.00 0.00 3.86
66 67 5.251764 AGTGATGATTCCAGGACTTTGAAG 58.748 41.667 0.00 0.00 0.00 3.02
67 68 5.246981 AGTGATGATTCCAGGACTTTGAA 57.753 39.130 0.00 0.00 0.00 2.69
68 69 4.916041 AGTGATGATTCCAGGACTTTGA 57.084 40.909 0.00 0.00 0.00 2.69
69 70 4.763793 ACAAGTGATGATTCCAGGACTTTG 59.236 41.667 0.00 0.00 29.91 2.77
70 71 4.990526 ACAAGTGATGATTCCAGGACTTT 58.009 39.130 0.00 0.00 29.91 2.66
71 72 4.647564 ACAAGTGATGATTCCAGGACTT 57.352 40.909 0.00 0.00 31.51 3.01
72 73 5.249393 AGTTACAAGTGATGATTCCAGGACT 59.751 40.000 0.00 0.00 0.00 3.85
73 74 5.491982 AGTTACAAGTGATGATTCCAGGAC 58.508 41.667 0.00 0.00 0.00 3.85
74 75 5.338381 GGAGTTACAAGTGATGATTCCAGGA 60.338 44.000 0.00 0.00 0.00 3.86
75 76 4.878397 GGAGTTACAAGTGATGATTCCAGG 59.122 45.833 0.00 0.00 0.00 4.45
76 77 4.568359 CGGAGTTACAAGTGATGATTCCAG 59.432 45.833 0.00 0.00 0.00 3.86
77 78 4.020573 ACGGAGTTACAAGTGATGATTCCA 60.021 41.667 0.00 0.00 37.78 3.53
78 79 4.504858 ACGGAGTTACAAGTGATGATTCC 58.495 43.478 0.00 0.00 37.78 3.01
95 96 1.801178 GCAAGGAGAACAAGAACGGAG 59.199 52.381 0.00 0.00 0.00 4.63
96 97 1.140052 TGCAAGGAGAACAAGAACGGA 59.860 47.619 0.00 0.00 0.00 4.69
97 98 1.264288 GTGCAAGGAGAACAAGAACGG 59.736 52.381 0.00 0.00 0.00 4.44
98 99 1.939934 TGTGCAAGGAGAACAAGAACG 59.060 47.619 0.00 0.00 0.00 3.95
99 100 3.854784 GCATGTGCAAGGAGAACAAGAAC 60.855 47.826 0.00 0.00 41.59 3.01
100 101 2.294233 GCATGTGCAAGGAGAACAAGAA 59.706 45.455 0.00 0.00 41.59 2.52
101 102 1.881973 GCATGTGCAAGGAGAACAAGA 59.118 47.619 0.00 0.00 41.59 3.02
102 103 1.068055 GGCATGTGCAAGGAGAACAAG 60.068 52.381 7.36 0.00 44.36 3.16
103 104 0.961019 GGCATGTGCAAGGAGAACAA 59.039 50.000 7.36 0.00 44.36 2.83
104 105 0.178995 TGGCATGTGCAAGGAGAACA 60.179 50.000 7.36 0.00 44.36 3.18
105 106 1.133790 GATGGCATGTGCAAGGAGAAC 59.866 52.381 3.81 0.00 44.36 3.01
106 107 1.272037 TGATGGCATGTGCAAGGAGAA 60.272 47.619 3.81 0.00 44.36 2.87
107 108 0.328926 TGATGGCATGTGCAAGGAGA 59.671 50.000 3.81 0.00 44.36 3.71
108 109 1.337071 GATGATGGCATGTGCAAGGAG 59.663 52.381 3.81 0.00 44.36 3.69
109 110 1.064240 AGATGATGGCATGTGCAAGGA 60.064 47.619 3.81 0.00 44.36 3.36
110 111 1.337071 GAGATGATGGCATGTGCAAGG 59.663 52.381 3.81 0.00 44.36 3.61
111 112 1.337071 GGAGATGATGGCATGTGCAAG 59.663 52.381 3.81 0.00 44.36 4.01
112 113 1.341187 TGGAGATGATGGCATGTGCAA 60.341 47.619 3.81 0.00 41.85 4.08
113 114 0.256464 TGGAGATGATGGCATGTGCA 59.744 50.000 3.81 0.00 42.40 4.57
114 115 1.269723 CATGGAGATGATGGCATGTGC 59.730 52.381 3.81 0.00 36.78 4.57
115 116 1.269723 GCATGGAGATGATGGCATGTG 59.730 52.381 3.81 0.00 34.11 3.21
116 117 1.145119 AGCATGGAGATGATGGCATGT 59.855 47.619 3.81 0.00 34.11 3.21
117 118 1.911057 AGCATGGAGATGATGGCATG 58.089 50.000 3.81 0.00 34.11 4.06
118 119 2.158519 TCAAGCATGGAGATGATGGCAT 60.159 45.455 0.00 0.00 37.47 4.40
119 120 1.213430 TCAAGCATGGAGATGATGGCA 59.787 47.619 0.00 0.00 0.00 4.92
120 121 1.977056 TCAAGCATGGAGATGATGGC 58.023 50.000 0.00 0.00 0.00 4.40
121 122 3.552875 AGTTCAAGCATGGAGATGATGG 58.447 45.455 0.00 0.00 0.00 3.51
122 123 5.357314 AGAAAGTTCAAGCATGGAGATGATG 59.643 40.000 0.00 0.00 0.00 3.07
123 124 5.507637 AGAAAGTTCAAGCATGGAGATGAT 58.492 37.500 0.00 0.00 0.00 2.45
124 125 4.914983 AGAAAGTTCAAGCATGGAGATGA 58.085 39.130 0.00 0.00 0.00 2.92
125 126 4.096081 GGAGAAAGTTCAAGCATGGAGATG 59.904 45.833 0.00 0.00 0.00 2.90
126 127 4.263639 TGGAGAAAGTTCAAGCATGGAGAT 60.264 41.667 0.00 0.00 0.00 2.75
127 128 3.072915 TGGAGAAAGTTCAAGCATGGAGA 59.927 43.478 0.00 0.00 0.00 3.71
128 129 3.415212 TGGAGAAAGTTCAAGCATGGAG 58.585 45.455 0.00 0.00 0.00 3.86
129 130 3.507162 TGGAGAAAGTTCAAGCATGGA 57.493 42.857 0.00 0.00 0.00 3.41
130 131 3.057033 CCTTGGAGAAAGTTCAAGCATGG 60.057 47.826 0.00 0.00 37.24 3.66
131 132 3.571401 ACCTTGGAGAAAGTTCAAGCATG 59.429 43.478 0.00 0.00 37.24 4.06
132 133 3.837355 ACCTTGGAGAAAGTTCAAGCAT 58.163 40.909 0.00 0.00 37.24 3.79
133 134 3.297134 ACCTTGGAGAAAGTTCAAGCA 57.703 42.857 0.00 0.00 37.24 3.91
134 135 3.632145 TGAACCTTGGAGAAAGTTCAAGC 59.368 43.478 2.15 0.00 35.17 4.01
135 136 5.767168 AGATGAACCTTGGAGAAAGTTCAAG 59.233 40.000 8.33 0.00 38.37 3.02
136 137 5.694995 AGATGAACCTTGGAGAAAGTTCAA 58.305 37.500 8.33 0.00 38.37 2.69
137 138 5.310409 AGATGAACCTTGGAGAAAGTTCA 57.690 39.130 6.86 6.86 38.79 3.18
138 139 6.488344 AGAAAGATGAACCTTGGAGAAAGTTC 59.512 38.462 0.00 0.00 33.66 3.01
139 140 6.368805 AGAAAGATGAACCTTGGAGAAAGTT 58.631 36.000 0.00 0.00 33.66 2.66
140 141 5.946486 AGAAAGATGAACCTTGGAGAAAGT 58.054 37.500 0.00 0.00 33.66 2.66
141 142 6.264067 ACAAGAAAGATGAACCTTGGAGAAAG 59.736 38.462 0.00 0.00 40.02 2.62
142 143 6.129179 ACAAGAAAGATGAACCTTGGAGAAA 58.871 36.000 0.00 0.00 40.02 2.52
143 144 5.694995 ACAAGAAAGATGAACCTTGGAGAA 58.305 37.500 0.00 0.00 40.02 2.87
144 145 5.308825 GACAAGAAAGATGAACCTTGGAGA 58.691 41.667 0.00 0.00 40.02 3.71
145 146 4.457257 GGACAAGAAAGATGAACCTTGGAG 59.543 45.833 0.00 0.00 40.02 3.86
146 147 4.141274 TGGACAAGAAAGATGAACCTTGGA 60.141 41.667 0.00 0.00 40.02 3.53
147 148 4.144297 TGGACAAGAAAGATGAACCTTGG 58.856 43.478 0.00 0.00 40.02 3.61
148 149 5.766222 CTTGGACAAGAAAGATGAACCTTG 58.234 41.667 6.19 0.00 40.79 3.61
149 150 4.279420 GCTTGGACAAGAAAGATGAACCTT 59.721 41.667 15.76 0.00 40.79 3.50
150 151 3.823304 GCTTGGACAAGAAAGATGAACCT 59.177 43.478 15.76 0.00 40.79 3.50
151 152 3.823304 AGCTTGGACAAGAAAGATGAACC 59.177 43.478 15.76 0.00 40.79 3.62
152 153 5.123027 CCTAGCTTGGACAAGAAAGATGAAC 59.877 44.000 15.76 0.00 40.79 3.18
153 154 5.248640 CCTAGCTTGGACAAGAAAGATGAA 58.751 41.667 15.76 0.00 40.79 2.57
154 155 4.836825 CCTAGCTTGGACAAGAAAGATGA 58.163 43.478 15.76 0.00 40.79 2.92
155 156 3.376546 GCCTAGCTTGGACAAGAAAGATG 59.623 47.826 19.07 2.37 40.79 2.90
156 157 3.615155 GCCTAGCTTGGACAAGAAAGAT 58.385 45.455 19.07 0.00 40.79 2.40
157 158 2.290323 GGCCTAGCTTGGACAAGAAAGA 60.290 50.000 19.07 0.00 40.79 2.52
158 159 2.087646 GGCCTAGCTTGGACAAGAAAG 58.912 52.381 19.07 10.67 40.79 2.62
159 160 1.271926 GGGCCTAGCTTGGACAAGAAA 60.272 52.381 22.18 2.01 40.79 2.52
160 161 0.328258 GGGCCTAGCTTGGACAAGAA 59.672 55.000 22.18 2.35 40.79 2.52
161 162 0.547712 AGGGCCTAGCTTGGACAAGA 60.548 55.000 22.18 0.00 40.79 3.02
162 163 0.329596 AAGGGCCTAGCTTGGACAAG 59.670 55.000 22.18 7.67 36.67 3.16
163 164 0.328258 GAAGGGCCTAGCTTGGACAA 59.672 55.000 22.18 0.00 36.67 3.18
164 165 0.840288 TGAAGGGCCTAGCTTGGACA 60.840 55.000 22.18 8.09 36.67 4.02
165 166 0.548510 ATGAAGGGCCTAGCTTGGAC 59.451 55.000 19.07 15.78 0.00 4.02
166 167 1.298953 AATGAAGGGCCTAGCTTGGA 58.701 50.000 19.07 0.00 0.00 3.53
167 168 1.753073 CAAATGAAGGGCCTAGCTTGG 59.247 52.381 6.41 10.15 0.00 3.61
168 169 2.450476 ACAAATGAAGGGCCTAGCTTG 58.550 47.619 6.41 11.03 0.00 4.01
169 170 2.907458 ACAAATGAAGGGCCTAGCTT 57.093 45.000 6.41 0.00 0.00 3.74
170 171 3.891049 CTTACAAATGAAGGGCCTAGCT 58.109 45.455 6.41 0.00 0.00 3.32
171 172 2.359214 GCTTACAAATGAAGGGCCTAGC 59.641 50.000 6.41 4.69 0.00 3.42
172 173 3.620488 TGCTTACAAATGAAGGGCCTAG 58.380 45.455 6.41 0.00 0.00 3.02
173 174 3.730215 TGCTTACAAATGAAGGGCCTA 57.270 42.857 6.41 0.00 0.00 3.93
174 175 2.603075 TGCTTACAAATGAAGGGCCT 57.397 45.000 0.00 0.00 0.00 5.19
175 176 3.676291 TTTGCTTACAAATGAAGGGCC 57.324 42.857 0.00 0.00 40.84 5.80
176 177 4.376146 TGTTTTGCTTACAAATGAAGGGC 58.624 39.130 0.00 0.00 44.96 5.19
177 178 6.917217 TTTGTTTTGCTTACAAATGAAGGG 57.083 33.333 7.27 0.00 44.96 3.95
204 205 9.186837 GAGAATATGATGATGCCTAAATTGGAT 57.813 33.333 0.00 0.00 0.00 3.41
205 206 8.165397 TGAGAATATGATGATGCCTAAATTGGA 58.835 33.333 0.00 0.00 0.00 3.53
206 207 8.344446 TGAGAATATGATGATGCCTAAATTGG 57.656 34.615 0.00 0.00 0.00 3.16
207 208 9.788960 CATGAGAATATGATGATGCCTAAATTG 57.211 33.333 0.00 0.00 0.00 2.32
208 209 9.749340 TCATGAGAATATGATGATGCCTAAATT 57.251 29.630 0.00 0.00 32.39 1.82
209 210 9.749340 TTCATGAGAATATGATGATGCCTAAAT 57.251 29.630 0.00 0.00 36.97 1.40
210 211 9.006839 GTTCATGAGAATATGATGATGCCTAAA 57.993 33.333 0.00 0.00 36.97 1.85
211 212 8.158789 TGTTCATGAGAATATGATGATGCCTAA 58.841 33.333 0.00 0.00 36.97 2.69
212 213 7.682628 TGTTCATGAGAATATGATGATGCCTA 58.317 34.615 0.00 0.00 36.97 3.93
213 214 6.540083 TGTTCATGAGAATATGATGATGCCT 58.460 36.000 0.00 0.00 36.97 4.75
214 215 6.812879 TGTTCATGAGAATATGATGATGCC 57.187 37.500 0.00 0.00 36.97 4.40
215 216 9.989869 CTAATGTTCATGAGAATATGATGATGC 57.010 33.333 0.00 0.00 35.97 3.91
245 246 5.524646 CAGGTACTTTCGTTTCTTGGTAACA 59.475 40.000 0.00 0.00 42.60 2.41
246 247 5.754890 TCAGGTACTTTCGTTTCTTGGTAAC 59.245 40.000 0.00 0.00 34.60 2.50
247 248 5.916318 TCAGGTACTTTCGTTTCTTGGTAA 58.084 37.500 0.00 0.00 34.60 2.85
248 249 5.534207 TCAGGTACTTTCGTTTCTTGGTA 57.466 39.130 0.00 0.00 34.60 3.25
249 250 4.411256 TCAGGTACTTTCGTTTCTTGGT 57.589 40.909 0.00 0.00 34.60 3.67
250 251 7.611213 ATTATCAGGTACTTTCGTTTCTTGG 57.389 36.000 0.00 0.00 34.60 3.61
251 252 8.717821 TGAATTATCAGGTACTTTCGTTTCTTG 58.282 33.333 0.00 0.00 34.60 3.02
252 253 8.842358 TGAATTATCAGGTACTTTCGTTTCTT 57.158 30.769 0.00 0.00 34.60 2.52
253 254 8.842358 TTGAATTATCAGGTACTTTCGTTTCT 57.158 30.769 0.00 0.00 34.60 2.52
255 256 9.840427 CAATTGAATTATCAGGTACTTTCGTTT 57.160 29.630 0.00 0.00 34.60 3.60
256 257 8.458843 CCAATTGAATTATCAGGTACTTTCGTT 58.541 33.333 7.12 0.00 34.60 3.85
257 258 7.415206 GCCAATTGAATTATCAGGTACTTTCGT 60.415 37.037 7.12 0.00 34.60 3.85
258 259 6.912591 GCCAATTGAATTATCAGGTACTTTCG 59.087 38.462 7.12 0.00 34.60 3.46
259 260 6.912591 CGCCAATTGAATTATCAGGTACTTTC 59.087 38.462 7.12 0.00 34.60 2.62
260 261 6.377146 ACGCCAATTGAATTATCAGGTACTTT 59.623 34.615 7.12 0.00 34.60 2.66
261 262 5.885912 ACGCCAATTGAATTATCAGGTACTT 59.114 36.000 7.12 0.00 34.60 2.24
262 263 5.296780 CACGCCAATTGAATTATCAGGTACT 59.703 40.000 7.12 0.00 43.88 2.73
263 264 5.510671 CACGCCAATTGAATTATCAGGTAC 58.489 41.667 7.12 0.00 36.78 3.34
264 265 4.036262 GCACGCCAATTGAATTATCAGGTA 59.964 41.667 7.12 0.00 36.78 3.08
265 266 3.181487 GCACGCCAATTGAATTATCAGGT 60.181 43.478 7.12 0.00 36.78 4.00
266 267 3.374745 GCACGCCAATTGAATTATCAGG 58.625 45.455 7.12 0.00 36.78 3.86
267 268 3.038017 CGCACGCCAATTGAATTATCAG 58.962 45.455 7.12 0.00 36.78 2.90
268 269 2.794282 GCGCACGCCAATTGAATTATCA 60.794 45.455 7.12 0.00 34.56 2.15
269 270 1.780860 GCGCACGCCAATTGAATTATC 59.219 47.619 7.12 0.00 34.56 1.75
270 271 1.838913 GCGCACGCCAATTGAATTAT 58.161 45.000 7.12 0.00 34.56 1.28
271 272 0.522286 CGCGCACGCCAATTGAATTA 60.522 50.000 8.75 0.00 37.98 1.40
272 273 1.801113 CGCGCACGCCAATTGAATT 60.801 52.632 8.75 0.00 37.98 2.17
273 274 2.202466 CGCGCACGCCAATTGAAT 60.202 55.556 8.75 0.00 37.98 2.57
274 275 3.307505 CTCGCGCACGCCAATTGAA 62.308 57.895 8.75 0.00 39.84 2.69
275 276 3.787676 CTCGCGCACGCCAATTGA 61.788 61.111 8.75 0.00 39.84 2.57
282 283 2.914797 TTACTAGAGCTCGCGCACGC 62.915 60.000 8.75 9.28 39.84 5.34
283 284 0.317103 ATTACTAGAGCTCGCGCACG 60.317 55.000 8.75 0.00 39.10 5.34
284 285 1.518929 CAATTACTAGAGCTCGCGCAC 59.481 52.381 8.75 0.00 39.10 5.34
285 286 1.536072 CCAATTACTAGAGCTCGCGCA 60.536 52.381 8.75 0.00 39.10 6.09
286 287 1.132588 CCAATTACTAGAGCTCGCGC 58.867 55.000 8.37 0.00 0.00 6.86
287 288 2.386249 GACCAATTACTAGAGCTCGCG 58.614 52.381 8.37 0.00 0.00 5.87
288 289 2.100916 TGGACCAATTACTAGAGCTCGC 59.899 50.000 8.37 0.00 0.00 5.03
289 290 3.381908 ACTGGACCAATTACTAGAGCTCG 59.618 47.826 8.37 0.00 0.00 5.03
290 291 6.041069 ACATACTGGACCAATTACTAGAGCTC 59.959 42.308 5.27 5.27 0.00 4.09
291 292 5.900123 ACATACTGGACCAATTACTAGAGCT 59.100 40.000 0.00 0.00 0.00 4.09
292 293 6.163135 ACATACTGGACCAATTACTAGAGC 57.837 41.667 0.00 0.00 0.00 4.09
294 295 9.021807 GCTATACATACTGGACCAATTACTAGA 57.978 37.037 0.00 0.00 0.00 2.43
295 296 8.803235 TGCTATACATACTGGACCAATTACTAG 58.197 37.037 0.00 0.00 0.00 2.57
296 297 8.715190 TGCTATACATACTGGACCAATTACTA 57.285 34.615 0.00 0.00 0.00 1.82
297 298 7.612065 TGCTATACATACTGGACCAATTACT 57.388 36.000 0.00 0.00 0.00 2.24
298 299 6.369065 GCTGCTATACATACTGGACCAATTAC 59.631 42.308 0.00 0.00 0.00 1.89
299 300 6.042666 TGCTGCTATACATACTGGACCAATTA 59.957 38.462 0.00 0.00 0.00 1.40
300 301 5.163205 TGCTGCTATACATACTGGACCAATT 60.163 40.000 0.00 0.00 0.00 2.32
301 302 4.347876 TGCTGCTATACATACTGGACCAAT 59.652 41.667 0.00 0.00 0.00 3.16
302 303 3.709141 TGCTGCTATACATACTGGACCAA 59.291 43.478 0.00 0.00 0.00 3.67
303 304 3.304829 TGCTGCTATACATACTGGACCA 58.695 45.455 0.00 0.00 0.00 4.02
304 305 3.306364 CCTGCTGCTATACATACTGGACC 60.306 52.174 0.00 0.00 0.00 4.46
305 306 3.306364 CCCTGCTGCTATACATACTGGAC 60.306 52.174 0.00 0.00 0.00 4.02
306 307 2.899900 CCCTGCTGCTATACATACTGGA 59.100 50.000 0.00 0.00 0.00 3.86
307 308 2.027745 CCCCTGCTGCTATACATACTGG 60.028 54.545 0.00 0.00 0.00 4.00
308 309 2.613977 GCCCCTGCTGCTATACATACTG 60.614 54.545 0.00 0.00 33.53 2.74
309 310 1.625818 GCCCCTGCTGCTATACATACT 59.374 52.381 0.00 0.00 33.53 2.12
310 311 2.100605 GCCCCTGCTGCTATACATAC 57.899 55.000 0.00 0.00 33.53 2.39
322 323 3.204467 TTACACCCACAGCCCCTGC 62.204 63.158 0.00 0.00 34.37 4.85
323 324 1.303317 GTTACACCCACAGCCCCTG 60.303 63.158 0.00 0.00 37.52 4.45
324 325 1.357272 TTGTTACACCCACAGCCCCT 61.357 55.000 0.00 0.00 0.00 4.79
325 326 0.251608 ATTGTTACACCCACAGCCCC 60.252 55.000 0.00 0.00 0.00 5.80
326 327 0.887933 CATTGTTACACCCACAGCCC 59.112 55.000 0.00 0.00 0.00 5.19
327 328 0.887933 CCATTGTTACACCCACAGCC 59.112 55.000 0.00 0.00 0.00 4.85
328 329 1.616159 ACCATTGTTACACCCACAGC 58.384 50.000 0.00 0.00 0.00 4.40
329 330 5.007034 TGAATACCATTGTTACACCCACAG 58.993 41.667 0.00 0.00 0.00 3.66
330 331 4.986783 TGAATACCATTGTTACACCCACA 58.013 39.130 0.00 0.00 0.00 4.17
331 332 5.417580 ACATGAATACCATTGTTACACCCAC 59.582 40.000 0.00 0.00 31.94 4.61
332 333 5.575157 ACATGAATACCATTGTTACACCCA 58.425 37.500 0.00 0.00 31.94 4.51
333 334 5.067283 GGACATGAATACCATTGTTACACCC 59.933 44.000 0.00 0.00 31.94 4.61
334 335 5.885912 AGGACATGAATACCATTGTTACACC 59.114 40.000 0.00 0.00 31.94 4.16
335 336 6.597672 TGAGGACATGAATACCATTGTTACAC 59.402 38.462 0.00 0.00 31.94 2.90
336 337 6.716284 TGAGGACATGAATACCATTGTTACA 58.284 36.000 0.00 0.00 31.94 2.41
337 338 7.498900 TGATGAGGACATGAATACCATTGTTAC 59.501 37.037 0.00 0.00 36.82 2.50
338 339 7.572814 TGATGAGGACATGAATACCATTGTTA 58.427 34.615 0.00 0.00 36.82 2.41
339 340 6.425735 TGATGAGGACATGAATACCATTGTT 58.574 36.000 0.00 0.00 36.82 2.83
340 341 6.005066 TGATGAGGACATGAATACCATTGT 57.995 37.500 0.00 0.00 36.82 2.71
341 342 6.544931 ACTTGATGAGGACATGAATACCATTG 59.455 38.462 0.00 0.00 36.82 2.82
342 343 6.666678 ACTTGATGAGGACATGAATACCATT 58.333 36.000 0.00 0.00 36.82 3.16
343 344 6.257994 ACTTGATGAGGACATGAATACCAT 57.742 37.500 0.00 0.00 36.82 3.55
344 345 5.698741 ACTTGATGAGGACATGAATACCA 57.301 39.130 0.00 0.00 36.82 3.25
345 346 7.225538 CAGTTACTTGATGAGGACATGAATACC 59.774 40.741 0.00 0.00 36.82 2.73
346 347 7.254590 GCAGTTACTTGATGAGGACATGAATAC 60.255 40.741 0.00 0.00 36.82 1.89
347 348 6.763135 GCAGTTACTTGATGAGGACATGAATA 59.237 38.462 0.00 0.00 36.82 1.75
348 349 5.587844 GCAGTTACTTGATGAGGACATGAAT 59.412 40.000 0.00 0.00 36.82 2.57
349 350 4.937620 GCAGTTACTTGATGAGGACATGAA 59.062 41.667 0.00 0.00 36.82 2.57
350 351 4.507710 GCAGTTACTTGATGAGGACATGA 58.492 43.478 0.00 0.00 36.82 3.07
351 352 3.624861 GGCAGTTACTTGATGAGGACATG 59.375 47.826 0.00 0.00 36.82 3.21
352 353 3.679917 CGGCAGTTACTTGATGAGGACAT 60.680 47.826 0.00 0.00 39.67 3.06
353 354 2.353704 CGGCAGTTACTTGATGAGGACA 60.354 50.000 0.00 0.00 0.00 4.02
354 355 2.271800 CGGCAGTTACTTGATGAGGAC 58.728 52.381 0.00 0.00 0.00 3.85
355 356 1.405526 GCGGCAGTTACTTGATGAGGA 60.406 52.381 0.00 0.00 0.00 3.71
356 357 1.009829 GCGGCAGTTACTTGATGAGG 58.990 55.000 0.00 0.00 0.00 3.86
357 358 0.647410 CGCGGCAGTTACTTGATGAG 59.353 55.000 0.00 0.00 0.00 2.90
358 359 0.037697 ACGCGGCAGTTACTTGATGA 60.038 50.000 12.47 0.00 0.00 2.92
359 360 1.635844 TACGCGGCAGTTACTTGATG 58.364 50.000 12.47 0.00 0.00 3.07
360 361 2.373540 TTACGCGGCAGTTACTTGAT 57.626 45.000 12.47 0.00 0.00 2.57
361 362 2.063266 CTTTACGCGGCAGTTACTTGA 58.937 47.619 12.47 0.00 0.00 3.02
362 363 1.796459 ACTTTACGCGGCAGTTACTTG 59.204 47.619 12.47 0.00 0.00 3.16
363 364 2.064014 GACTTTACGCGGCAGTTACTT 58.936 47.619 12.47 0.00 0.00 2.24
364 365 1.271656 AGACTTTACGCGGCAGTTACT 59.728 47.619 12.47 0.64 0.00 2.24
365 366 1.389106 CAGACTTTACGCGGCAGTTAC 59.611 52.381 12.47 0.00 0.00 2.50
366 367 1.270274 TCAGACTTTACGCGGCAGTTA 59.730 47.619 12.47 0.00 0.00 2.24
367 368 0.032952 TCAGACTTTACGCGGCAGTT 59.967 50.000 12.47 0.00 0.00 3.16
368 369 0.666577 GTCAGACTTTACGCGGCAGT 60.667 55.000 12.47 9.13 0.00 4.40
369 370 1.674611 CGTCAGACTTTACGCGGCAG 61.675 60.000 12.47 5.39 31.66 4.85
370 371 1.731613 CGTCAGACTTTACGCGGCA 60.732 57.895 12.47 0.00 31.66 5.69
371 372 0.454957 TACGTCAGACTTTACGCGGC 60.455 55.000 12.47 0.00 42.74 6.53
372 373 1.135859 ACTACGTCAGACTTTACGCGG 60.136 52.381 12.47 0.00 42.74 6.46
373 374 2.238245 ACTACGTCAGACTTTACGCG 57.762 50.000 3.53 3.53 42.74 6.01
374 375 2.587241 CGAACTACGTCAGACTTTACGC 59.413 50.000 0.00 0.00 42.74 4.42
375 376 4.057730 TCGAACTACGTCAGACTTTACG 57.942 45.455 0.00 5.73 44.47 3.18
376 377 6.738352 TTTTCGAACTACGTCAGACTTTAC 57.262 37.500 0.00 0.00 43.13 2.01
377 378 9.462174 TTTATTTTCGAACTACGTCAGACTTTA 57.538 29.630 0.00 0.00 43.13 1.85
378 379 7.935338 TTATTTTCGAACTACGTCAGACTTT 57.065 32.000 0.00 0.00 43.13 2.66
379 380 7.935338 TTTATTTTCGAACTACGTCAGACTT 57.065 32.000 0.00 0.00 43.13 3.01
380 381 7.935338 TTTTATTTTCGAACTACGTCAGACT 57.065 32.000 0.00 0.00 43.13 3.24
381 382 8.430063 TCATTTTATTTTCGAACTACGTCAGAC 58.570 33.333 0.00 0.00 43.13 3.51
382 383 8.430063 GTCATTTTATTTTCGAACTACGTCAGA 58.570 33.333 0.00 0.00 43.13 3.27
383 384 7.418801 CGTCATTTTATTTTCGAACTACGTCAG 59.581 37.037 0.00 0.00 43.13 3.51
384 385 7.221970 CGTCATTTTATTTTCGAACTACGTCA 58.778 34.615 0.00 0.00 43.13 4.35
385 386 6.189795 GCGTCATTTTATTTTCGAACTACGTC 59.810 38.462 0.00 0.00 43.13 4.34
386 387 6.011277 GCGTCATTTTATTTTCGAACTACGT 58.989 36.000 0.00 0.00 43.13 3.57
387 388 6.010675 TGCGTCATTTTATTTTCGAACTACG 58.989 36.000 0.00 0.00 44.09 3.51
388 389 7.511506 GCATGCGTCATTTTATTTTCGAACTAC 60.512 37.037 0.00 0.00 0.00 2.73
389 390 6.467682 GCATGCGTCATTTTATTTTCGAACTA 59.532 34.615 0.00 0.00 0.00 2.24
390 391 5.286082 GCATGCGTCATTTTATTTTCGAACT 59.714 36.000 0.00 0.00 0.00 3.01
391 392 5.060323 TGCATGCGTCATTTTATTTTCGAAC 59.940 36.000 14.09 0.00 0.00 3.95
392 393 5.157067 TGCATGCGTCATTTTATTTTCGAA 58.843 33.333 14.09 0.00 0.00 3.71
393 394 4.727475 TGCATGCGTCATTTTATTTTCGA 58.273 34.783 14.09 0.00 0.00 3.71
394 395 5.004630 ACATGCATGCGTCATTTTATTTTCG 59.995 36.000 26.53 0.00 0.00 3.46
395 396 6.335176 ACATGCATGCGTCATTTTATTTTC 57.665 33.333 26.53 0.00 0.00 2.29
396 397 9.695526 ATATACATGCATGCGTCATTTTATTTT 57.304 25.926 26.53 4.31 0.00 1.82
397 398 9.131416 CATATACATGCATGCGTCATTTTATTT 57.869 29.630 26.53 6.69 0.00 1.40
398 399 8.513774 TCATATACATGCATGCGTCATTTTATT 58.486 29.630 26.53 4.97 31.73 1.40
399 400 7.964559 GTCATATACATGCATGCGTCATTTTAT 59.035 33.333 26.53 15.31 31.73 1.40
400 401 7.041508 TGTCATATACATGCATGCGTCATTTTA 60.042 33.333 26.53 9.09 31.43 1.52
401 402 6.144854 GTCATATACATGCATGCGTCATTTT 58.855 36.000 26.53 7.00 31.73 1.82
402 403 5.239087 TGTCATATACATGCATGCGTCATTT 59.761 36.000 26.53 7.76 31.43 2.32
403 404 4.756135 TGTCATATACATGCATGCGTCATT 59.244 37.500 26.53 8.52 31.43 2.57
404 405 4.152938 GTGTCATATACATGCATGCGTCAT 59.847 41.667 26.53 15.90 41.10 3.06
405 406 3.494251 GTGTCATATACATGCATGCGTCA 59.506 43.478 26.53 12.65 41.10 4.35
406 407 3.742882 AGTGTCATATACATGCATGCGTC 59.257 43.478 26.53 10.39 41.10 5.19
407 408 3.732212 AGTGTCATATACATGCATGCGT 58.268 40.909 26.53 17.00 41.10 5.24
408 409 4.460505 CAAGTGTCATATACATGCATGCG 58.539 43.478 26.53 10.07 41.10 4.73
409 410 4.276678 ACCAAGTGTCATATACATGCATGC 59.723 41.667 26.53 11.82 41.10 4.06
410 411 5.754778 CACCAAGTGTCATATACATGCATG 58.245 41.667 25.09 25.09 41.10 4.06
411 412 4.276678 GCACCAAGTGTCATATACATGCAT 59.723 41.667 0.00 0.00 41.10 3.96
412 413 3.627123 GCACCAAGTGTCATATACATGCA 59.373 43.478 0.00 0.00 41.10 3.96
413 414 3.879295 AGCACCAAGTGTCATATACATGC 59.121 43.478 0.00 0.00 41.10 4.06
414 415 4.512944 GGAGCACCAAGTGTCATATACATG 59.487 45.833 0.00 0.00 36.93 3.21
415 416 4.164030 TGGAGCACCAAGTGTCATATACAT 59.836 41.667 0.00 0.00 43.91 2.29
416 417 3.517500 TGGAGCACCAAGTGTCATATACA 59.482 43.478 0.00 0.00 43.91 2.29
417 418 4.137116 TGGAGCACCAAGTGTCATATAC 57.863 45.455 0.00 0.00 43.91 1.47
430 431 4.381292 CCTCATTTTCTTTCATGGAGCACC 60.381 45.833 0.00 0.00 0.00 5.01
431 432 4.219288 ACCTCATTTTCTTTCATGGAGCAC 59.781 41.667 0.00 0.00 0.00 4.40
432 433 4.410099 ACCTCATTTTCTTTCATGGAGCA 58.590 39.130 0.00 0.00 0.00 4.26
433 434 6.096001 ACATACCTCATTTTCTTTCATGGAGC 59.904 38.462 0.00 0.00 0.00 4.70
434 435 7.636150 ACATACCTCATTTTCTTTCATGGAG 57.364 36.000 0.00 0.00 0.00 3.86
435 436 9.123902 CATACATACCTCATTTTCTTTCATGGA 57.876 33.333 0.00 0.00 0.00 3.41
436 437 8.906867 ACATACATACCTCATTTTCTTTCATGG 58.093 33.333 0.00 0.00 0.00 3.66
459 460 9.019656 TGGAGCATAACTAAACAAAACATACAT 57.980 29.630 0.00 0.00 0.00 2.29
460 461 8.397575 TGGAGCATAACTAAACAAAACATACA 57.602 30.769 0.00 0.00 0.00 2.29
461 462 9.855021 AATGGAGCATAACTAAACAAAACATAC 57.145 29.630 0.00 0.00 0.00 2.39
463 464 9.777297 AAAATGGAGCATAACTAAACAAAACAT 57.223 25.926 0.00 0.00 0.00 2.71
548 549 9.381038 ACCCTTATAGTTTCTCATATAGCAAGA 57.619 33.333 0.00 0.00 0.00 3.02
564 565 9.363401 GGCAAAAGGATAATTAACCCTTATAGT 57.637 33.333 17.67 5.16 39.21 2.12
565 566 8.803235 GGGCAAAAGGATAATTAACCCTTATAG 58.197 37.037 17.67 13.08 39.21 1.31
566 567 8.516198 AGGGCAAAAGGATAATTAACCCTTATA 58.484 33.333 17.67 0.00 42.56 0.98
567 568 7.370238 AGGGCAAAAGGATAATTAACCCTTAT 58.630 34.615 17.67 9.30 42.56 1.73
593 594 1.276138 CTGAGCACATGGACACCACTA 59.724 52.381 0.00 0.00 35.80 2.74
624 625 4.510038 AAACTGAGCACAATTCACATCC 57.490 40.909 0.00 0.00 0.00 3.51
629 630 2.224018 GGGCAAAACTGAGCACAATTCA 60.224 45.455 0.00 0.00 33.42 2.57
736 737 2.172483 AATTGGTCGTCTCTGCCGCT 62.172 55.000 0.00 0.00 0.00 5.52
773 774 2.270850 GGTCCCATAAGCCACGCA 59.729 61.111 0.00 0.00 0.00 5.24
783 784 2.373707 GCTCTCTGCTGGGTCCCAT 61.374 63.158 12.23 0.00 38.95 4.00
806 807 0.179161 CCCGCAACGACTCTCTACTG 60.179 60.000 0.00 0.00 0.00 2.74
809 810 0.892358 ACACCCGCAACGACTCTCTA 60.892 55.000 0.00 0.00 0.00 2.43
816 817 0.462375 ATATAGCACACCCGCAACGA 59.538 50.000 0.00 0.00 0.00 3.85
852 854 4.293648 CTGTCGCCGTGGTCACCA 62.294 66.667 0.00 0.00 0.00 4.17
893 903 2.695759 CGCCGTGCTCTCTCTCTGT 61.696 63.158 0.00 0.00 0.00 3.41
894 904 2.101965 CGCCGTGCTCTCTCTCTG 59.898 66.667 0.00 0.00 0.00 3.35
1363 1374 1.573108 TCGCCCTCCATCTCTTCTTT 58.427 50.000 0.00 0.00 0.00 2.52
1388 1399 1.818060 CAGCTAGCTCTCTGTCAGTGT 59.182 52.381 16.15 0.00 0.00 3.55
1411 1422 5.353678 CCTTCTTCTTCAACATCCTAAGCTG 59.646 44.000 0.00 0.00 0.00 4.24
1472 1483 5.691815 CAAATGCCCAAAAGTATTTGCAAG 58.308 37.500 0.00 0.00 43.73 4.01
1513 1524 8.642432 TCCATACATTTTCAACATTACAACCAA 58.358 29.630 0.00 0.00 0.00 3.67
1750 1765 0.471591 ATTTGGCCCAAGAGCAACCA 60.472 50.000 0.00 0.00 0.00 3.67
1905 1920 9.691362 GAATAACTCAATTAGCTTCCACAAAAA 57.309 29.630 0.00 0.00 0.00 1.94
1925 1940 7.035612 CCTTAATTGTTTGGCTCTGGAATAAC 58.964 38.462 0.00 0.00 0.00 1.89
2218 2241 1.484240 GTCTTGCCATCTGTCCTAGCT 59.516 52.381 0.00 0.00 0.00 3.32
2309 2334 0.310543 ACGCGTGTGCAAACATTCAT 59.689 45.000 12.93 0.00 42.97 2.57
2386 2411 3.090790 TCATGTGGCAGTGCAAACATAT 58.909 40.909 26.21 13.59 35.98 1.78
2504 2535 3.072915 TGAGAAGCCCTCTGTTTCATTCA 59.927 43.478 5.47 0.00 42.44 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.