Multiple sequence alignment - TraesCS5D01G483000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G483000 chr5D 100.000 2606 0 0 1 2606 520085833 520083228 0.000000e+00 4813
1 TraesCS5D01G483000 chr5D 95.682 579 20 3 7 585 385439145 385438572 0.000000e+00 926
2 TraesCS5D01G483000 chr5D 88.551 559 38 7 2066 2603 486145121 486145674 0.000000e+00 654
3 TraesCS5D01G483000 chr5D 82.852 589 67 18 2043 2606 544164917 544165496 5.010000e-137 497
4 TraesCS5D01G483000 chr5D 74.257 606 99 43 997 1581 520098570 520098001 4.400000e-48 202
5 TraesCS5D01G483000 chr5D 73.828 512 98 21 995 1494 520104447 520103960 1.240000e-38 171
6 TraesCS5D01G483000 chr4D 96.220 582 20 2 7 588 312942731 312943310 0.000000e+00 952
7 TraesCS5D01G483000 chr4D 82.107 598 53 18 2038 2606 469506000 469506572 1.830000e-126 462
8 TraesCS5D01G483000 chr5B 92.169 664 31 9 918 1581 655017826 655017184 0.000000e+00 918
9 TraesCS5D01G483000 chr5B 72.471 603 121 28 995 1579 655055602 655055027 4.490000e-33 152
10 TraesCS5D01G483000 chrUn 93.570 591 26 4 7 589 48200579 48199993 0.000000e+00 870
11 TraesCS5D01G483000 chrUn 93.570 591 26 4 7 589 429286766 429286180 0.000000e+00 870
12 TraesCS5D01G483000 chrUn 72.471 603 121 28 995 1579 284672184 284671609 4.490000e-33 152
13 TraesCS5D01G483000 chrUn 72.471 603 121 28 995 1579 290418090 290417515 4.490000e-33 152
14 TraesCS5D01G483000 chrUn 72.442 606 122 28 992 1579 296422372 296422950 4.490000e-33 152
15 TraesCS5D01G483000 chr4A 93.570 591 26 4 7 589 605381087 605381673 0.000000e+00 870
16 TraesCS5D01G483000 chr4A 87.434 565 56 7 2054 2606 584888658 584889219 1.020000e-178 636
17 TraesCS5D01G483000 chr3D 93.356 587 26 10 7 586 24208426 24207846 0.000000e+00 856
18 TraesCS5D01G483000 chr1D 93.437 579 31 6 7 585 29834683 29835254 0.000000e+00 852
19 TraesCS5D01G483000 chr1D 81.818 231 21 2 2043 2252 337958970 337959200 9.590000e-40 174
20 TraesCS5D01G483000 chr7D 92.662 586 35 7 7 592 530412718 530413295 0.000000e+00 837
21 TraesCS5D01G483000 chr7D 88.776 588 38 7 2042 2606 136239885 136240467 0.000000e+00 695
22 TraesCS5D01G483000 chr7D 87.584 596 46 10 2035 2606 630616959 630617550 0.000000e+00 665
23 TraesCS5D01G483000 chr7D 86.087 575 61 13 2043 2606 80354684 80355250 3.710000e-168 601
24 TraesCS5D01G483000 chr7D 83.117 462 47 15 2037 2474 575191917 575191463 2.430000e-105 392
25 TraesCS5D01G483000 chr6D 92.555 591 31 11 7 589 35879688 35880273 0.000000e+00 835
26 TraesCS5D01G483000 chr6D 87.521 585 47 11 2043 2606 43483131 43482552 0.000000e+00 652
27 TraesCS5D01G483000 chr6D 86.496 585 52 15 2043 2606 43181690 43182268 3.680000e-173 617
28 TraesCS5D01G483000 chr7A 91.373 568 39 8 2043 2606 78225784 78226345 0.000000e+00 769
29 TraesCS5D01G483000 chr2D 87.710 594 42 12 2035 2606 180537797 180538381 0.000000e+00 664
30 TraesCS5D01G483000 chr2D 91.966 473 32 4 2136 2606 196861018 196861486 0.000000e+00 658
31 TraesCS5D01G483000 chr5A 91.063 414 34 2 1582 1994 647110381 647109970 8.150000e-155 556
32 TraesCS5D01G483000 chr6A 87.143 140 15 2 2043 2182 139898199 139898335 3.470000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G483000 chr5D 520083228 520085833 2605 True 4813 4813 100.000 1 2606 1 chr5D.!!$R2 2605
1 TraesCS5D01G483000 chr5D 385438572 385439145 573 True 926 926 95.682 7 585 1 chr5D.!!$R1 578
2 TraesCS5D01G483000 chr5D 486145121 486145674 553 False 654 654 88.551 2066 2603 1 chr5D.!!$F1 537
3 TraesCS5D01G483000 chr5D 544164917 544165496 579 False 497 497 82.852 2043 2606 1 chr5D.!!$F2 563
4 TraesCS5D01G483000 chr5D 520098001 520098570 569 True 202 202 74.257 997 1581 1 chr5D.!!$R3 584
5 TraesCS5D01G483000 chr4D 312942731 312943310 579 False 952 952 96.220 7 588 1 chr4D.!!$F1 581
6 TraesCS5D01G483000 chr4D 469506000 469506572 572 False 462 462 82.107 2038 2606 1 chr4D.!!$F2 568
7 TraesCS5D01G483000 chr5B 655017184 655017826 642 True 918 918 92.169 918 1581 1 chr5B.!!$R1 663
8 TraesCS5D01G483000 chrUn 48199993 48200579 586 True 870 870 93.570 7 589 1 chrUn.!!$R1 582
9 TraesCS5D01G483000 chrUn 429286180 429286766 586 True 870 870 93.570 7 589 1 chrUn.!!$R4 582
10 TraesCS5D01G483000 chr4A 605381087 605381673 586 False 870 870 93.570 7 589 1 chr4A.!!$F2 582
11 TraesCS5D01G483000 chr4A 584888658 584889219 561 False 636 636 87.434 2054 2606 1 chr4A.!!$F1 552
12 TraesCS5D01G483000 chr3D 24207846 24208426 580 True 856 856 93.356 7 586 1 chr3D.!!$R1 579
13 TraesCS5D01G483000 chr1D 29834683 29835254 571 False 852 852 93.437 7 585 1 chr1D.!!$F1 578
14 TraesCS5D01G483000 chr7D 530412718 530413295 577 False 837 837 92.662 7 592 1 chr7D.!!$F3 585
15 TraesCS5D01G483000 chr7D 136239885 136240467 582 False 695 695 88.776 2042 2606 1 chr7D.!!$F2 564
16 TraesCS5D01G483000 chr7D 630616959 630617550 591 False 665 665 87.584 2035 2606 1 chr7D.!!$F4 571
17 TraesCS5D01G483000 chr7D 80354684 80355250 566 False 601 601 86.087 2043 2606 1 chr7D.!!$F1 563
18 TraesCS5D01G483000 chr6D 35879688 35880273 585 False 835 835 92.555 7 589 1 chr6D.!!$F1 582
19 TraesCS5D01G483000 chr6D 43482552 43483131 579 True 652 652 87.521 2043 2606 1 chr6D.!!$R1 563
20 TraesCS5D01G483000 chr6D 43181690 43182268 578 False 617 617 86.496 2043 2606 1 chr6D.!!$F2 563
21 TraesCS5D01G483000 chr7A 78225784 78226345 561 False 769 769 91.373 2043 2606 1 chr7A.!!$F1 563
22 TraesCS5D01G483000 chr2D 180537797 180538381 584 False 664 664 87.710 2035 2606 1 chr2D.!!$F1 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
836 863 0.179054 GATACAAGGGAAGGCCGTCC 60.179 60.0 27.99 27.99 36.9 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1988 2030 0.033228 CGGCTGGAGATGCTCTAAGG 59.967 60.0 0.0 0.0 0.0 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
128 130 7.610580 ACCCCTAAAGTTTTTCAAATCATGA 57.389 32.000 0.00 0.00 35.85 3.07
145 147 9.599866 CAAATCATGATAACTGTAGTAGACCAA 57.400 33.333 9.04 0.00 0.00 3.67
235 238 1.885887 GTTGAGCAACCATGGCAACTA 59.114 47.619 19.25 0.00 36.73 2.24
548 575 4.692475 GGGCGTGCGGTACAACCT 62.692 66.667 0.00 0.00 35.66 3.50
564 591 0.543410 ACCTCCCGATACACCACACA 60.543 55.000 0.00 0.00 0.00 3.72
592 619 4.689345 GCAGTTATCGGCGTCCTAAATATT 59.311 41.667 6.85 0.00 0.00 1.28
593 620 5.178809 GCAGTTATCGGCGTCCTAAATATTT 59.821 40.000 6.85 5.89 0.00 1.40
594 621 6.293244 GCAGTTATCGGCGTCCTAAATATTTT 60.293 38.462 6.85 0.00 0.00 1.82
595 622 7.636326 CAGTTATCGGCGTCCTAAATATTTTT 58.364 34.615 6.85 0.00 0.00 1.94
596 623 7.586300 CAGTTATCGGCGTCCTAAATATTTTTG 59.414 37.037 6.85 0.34 0.00 2.44
597 624 4.886247 TCGGCGTCCTAAATATTTTTGG 57.114 40.909 6.85 9.40 0.00 3.28
598 625 4.515361 TCGGCGTCCTAAATATTTTTGGA 58.485 39.130 6.85 11.48 0.00 3.53
599 626 4.942483 TCGGCGTCCTAAATATTTTTGGAA 59.058 37.500 18.31 5.97 0.00 3.53
600 627 5.591067 TCGGCGTCCTAAATATTTTTGGAAT 59.409 36.000 18.31 0.00 0.00 3.01
601 628 6.095720 TCGGCGTCCTAAATATTTTTGGAATT 59.904 34.615 18.31 0.00 0.00 2.17
602 629 6.198216 CGGCGTCCTAAATATTTTTGGAATTG 59.802 38.462 18.31 13.91 0.00 2.32
603 630 7.039270 GGCGTCCTAAATATTTTTGGAATTGT 58.961 34.615 18.31 0.00 0.00 2.71
604 631 8.192110 GGCGTCCTAAATATTTTTGGAATTGTA 58.808 33.333 18.31 0.79 0.00 2.41
605 632 9.744468 GCGTCCTAAATATTTTTGGAATTGTAT 57.256 29.630 18.31 0.00 0.00 2.29
620 647 9.984190 TTGGAATTGTATTTACACTTTAAACCC 57.016 29.630 0.00 0.00 35.64 4.11
621 648 8.586744 TGGAATTGTATTTACACTTTAAACCCC 58.413 33.333 0.00 0.00 35.64 4.95
622 649 7.756272 GGAATTGTATTTACACTTTAAACCCCG 59.244 37.037 0.00 0.00 35.64 5.73
623 650 5.625921 TGTATTTACACTTTAAACCCCGC 57.374 39.130 0.00 0.00 0.00 6.13
624 651 4.458642 TGTATTTACACTTTAAACCCCGCC 59.541 41.667 0.00 0.00 0.00 6.13
625 652 1.521580 TTACACTTTAAACCCCGCCG 58.478 50.000 0.00 0.00 0.00 6.46
626 653 0.321475 TACACTTTAAACCCCGCCGG 60.321 55.000 0.00 0.00 37.81 6.13
627 654 2.674033 ACTTTAAACCCCGCCGGC 60.674 61.111 19.07 19.07 33.26 6.13
628 655 3.445687 CTTTAAACCCCGCCGGCC 61.446 66.667 23.46 2.84 33.26 6.13
640 667 4.697756 CCGGCCGGACTCAAGCAA 62.698 66.667 41.82 0.00 37.50 3.91
641 668 3.121030 CGGCCGGACTCAAGCAAG 61.121 66.667 20.10 0.00 0.00 4.01
642 669 3.435186 GGCCGGACTCAAGCAAGC 61.435 66.667 5.05 0.00 0.00 4.01
643 670 2.359230 GCCGGACTCAAGCAAGCT 60.359 61.111 5.05 0.00 0.00 3.74
644 671 2.394563 GCCGGACTCAAGCAAGCTC 61.395 63.158 5.05 0.00 0.00 4.09
645 672 1.743252 CCGGACTCAAGCAAGCTCC 60.743 63.158 0.00 0.00 0.00 4.70
646 673 1.004560 CGGACTCAAGCAAGCTCCA 60.005 57.895 0.00 0.00 0.00 3.86
647 674 0.392193 CGGACTCAAGCAAGCTCCAT 60.392 55.000 0.00 0.00 0.00 3.41
648 675 1.093159 GGACTCAAGCAAGCTCCATG 58.907 55.000 0.00 0.00 0.00 3.66
649 676 1.093159 GACTCAAGCAAGCTCCATGG 58.907 55.000 4.97 4.97 0.00 3.66
650 677 0.323178 ACTCAAGCAAGCTCCATGGG 60.323 55.000 13.02 3.69 0.00 4.00
651 678 1.664321 CTCAAGCAAGCTCCATGGGC 61.664 60.000 13.02 14.33 0.00 5.36
652 679 1.681327 CAAGCAAGCTCCATGGGCT 60.681 57.895 18.75 18.75 42.31 5.19
653 680 0.394762 CAAGCAAGCTCCATGGGCTA 60.395 55.000 23.01 0.00 39.30 3.93
654 681 0.332632 AAGCAAGCTCCATGGGCTAA 59.667 50.000 23.01 0.00 39.30 3.09
655 682 0.332632 AGCAAGCTCCATGGGCTAAA 59.667 50.000 23.01 0.00 39.30 1.85
656 683 0.457443 GCAAGCTCCATGGGCTAAAC 59.543 55.000 23.01 14.01 39.30 2.01
657 684 1.957113 GCAAGCTCCATGGGCTAAACT 60.957 52.381 23.01 9.06 39.30 2.66
658 685 2.019984 CAAGCTCCATGGGCTAAACTC 58.980 52.381 23.01 1.47 39.30 3.01
659 686 1.589414 AGCTCCATGGGCTAAACTCT 58.411 50.000 21.87 1.49 38.36 3.24
660 687 1.918957 AGCTCCATGGGCTAAACTCTT 59.081 47.619 21.87 0.86 38.36 2.85
661 688 2.019984 GCTCCATGGGCTAAACTCTTG 58.980 52.381 13.02 0.00 0.00 3.02
662 689 2.356125 GCTCCATGGGCTAAACTCTTGA 60.356 50.000 13.02 0.00 0.00 3.02
663 690 3.274288 CTCCATGGGCTAAACTCTTGAC 58.726 50.000 13.02 0.00 0.00 3.18
664 691 2.009774 CCATGGGCTAAACTCTTGACG 58.990 52.381 2.85 0.00 0.00 4.35
665 692 2.354704 CCATGGGCTAAACTCTTGACGA 60.355 50.000 2.85 0.00 0.00 4.20
666 693 2.743636 TGGGCTAAACTCTTGACGAG 57.256 50.000 0.00 0.00 45.56 4.18
681 708 8.566008 CTCTTGACGAGTTCAAAATGATTTTT 57.434 30.769 0.00 0.00 43.90 1.94
682 709 8.560576 TCTTGACGAGTTCAAAATGATTTTTC 57.439 30.769 0.00 0.00 43.90 2.29
683 710 8.187480 TCTTGACGAGTTCAAAATGATTTTTCA 58.813 29.630 0.00 0.00 43.90 2.69
684 711 8.694975 TTGACGAGTTCAAAATGATTTTTCAA 57.305 26.923 0.00 4.32 41.51 2.69
685 712 8.694975 TGACGAGTTCAAAATGATTTTTCAAA 57.305 26.923 0.00 0.00 32.72 2.69
686 713 8.806634 TGACGAGTTCAAAATGATTTTTCAAAG 58.193 29.630 0.00 0.00 32.72 2.77
687 714 8.925161 ACGAGTTCAAAATGATTTTTCAAAGA 57.075 26.923 0.00 0.00 32.72 2.52
688 715 9.364989 ACGAGTTCAAAATGATTTTTCAAAGAA 57.635 25.926 0.00 0.00 32.72 2.52
689 716 9.839589 CGAGTTCAAAATGATTTTTCAAAGAAG 57.160 29.630 0.00 0.00 32.72 2.85
697 724 9.434420 AAATGATTTTTCAAAGAAGTTGTGACA 57.566 25.926 0.00 0.00 38.47 3.58
698 725 7.810766 TGATTTTTCAAAGAAGTTGTGACAC 57.189 32.000 0.00 0.00 38.47 3.67
699 726 7.374272 TGATTTTTCAAAGAAGTTGTGACACA 58.626 30.769 3.56 3.56 38.47 3.72
700 727 8.034215 TGATTTTTCAAAGAAGTTGTGACACAT 58.966 29.630 9.55 0.00 38.47 3.21
701 728 8.776376 ATTTTTCAAAGAAGTTGTGACACATT 57.224 26.923 9.55 1.14 38.47 2.71
702 729 8.600449 TTTTTCAAAGAAGTTGTGACACATTT 57.400 26.923 9.55 7.30 38.47 2.32
703 730 8.600449 TTTTCAAAGAAGTTGTGACACATTTT 57.400 26.923 9.55 6.94 38.47 1.82
704 731 8.600449 TTTCAAAGAAGTTGTGACACATTTTT 57.400 26.923 9.55 4.39 38.47 1.94
724 751 4.868450 TTTTTGACAAAGACGTCGTCAT 57.132 36.364 26.17 12.89 39.29 3.06
725 752 3.852471 TTTGACAAAGACGTCGTCATG 57.148 42.857 26.17 23.90 39.29 3.07
726 753 1.778334 TGACAAAGACGTCGTCATGG 58.222 50.000 26.17 15.31 38.84 3.66
727 754 1.338655 TGACAAAGACGTCGTCATGGA 59.661 47.619 26.17 12.78 38.84 3.41
728 755 2.029380 TGACAAAGACGTCGTCATGGAT 60.029 45.455 26.17 10.31 38.84 3.41
729 756 3.191791 TGACAAAGACGTCGTCATGGATA 59.808 43.478 26.17 12.25 38.84 2.59
730 757 4.142249 TGACAAAGACGTCGTCATGGATAT 60.142 41.667 26.17 9.36 38.84 1.63
731 758 4.112634 ACAAAGACGTCGTCATGGATATG 58.887 43.478 26.17 12.03 34.60 1.78
732 759 2.423926 AGACGTCGTCATGGATATGC 57.576 50.000 26.17 0.00 34.60 3.14
733 760 1.000163 AGACGTCGTCATGGATATGCC 60.000 52.381 26.17 0.00 34.60 4.40
743 770 2.662535 TGGATATGCCAGGGACAATG 57.337 50.000 0.00 0.00 43.33 2.82
744 771 1.852309 TGGATATGCCAGGGACAATGT 59.148 47.619 0.00 0.00 43.33 2.71
745 772 2.158623 TGGATATGCCAGGGACAATGTC 60.159 50.000 4.51 4.51 43.33 3.06
746 773 2.107204 GGATATGCCAGGGACAATGTCT 59.893 50.000 13.53 0.00 36.34 3.41
747 774 3.435601 GGATATGCCAGGGACAATGTCTT 60.436 47.826 13.53 0.00 36.34 3.01
748 775 1.843368 ATGCCAGGGACAATGTCTTG 58.157 50.000 13.53 11.51 38.39 3.02
749 776 7.906874 GGATATGCCAGGGACAATGTCTTGT 62.907 48.000 13.53 0.00 41.70 3.16
750 777 1.702401 TGCCAGGGACAATGTCTTGTA 59.298 47.619 13.53 1.99 45.57 2.41
751 778 2.084546 GCCAGGGACAATGTCTTGTAC 58.915 52.381 13.53 0.00 45.57 2.90
752 779 2.346803 CCAGGGACAATGTCTTGTACG 58.653 52.381 13.53 0.00 45.72 3.67
753 780 2.028476 CCAGGGACAATGTCTTGTACGA 60.028 50.000 13.53 0.00 45.72 3.43
754 781 2.993899 CAGGGACAATGTCTTGTACGAC 59.006 50.000 13.53 0.00 45.72 4.34
755 782 2.631062 AGGGACAATGTCTTGTACGACA 59.369 45.455 13.53 6.13 45.72 4.35
756 783 3.070446 AGGGACAATGTCTTGTACGACAA 59.930 43.478 13.53 0.00 45.72 3.18
772 799 9.715121 TTGTACGACAAGAAATACTAATTCCTT 57.285 29.630 0.00 0.00 32.34 3.36
773 800 9.362539 TGTACGACAAGAAATACTAATTCCTTC 57.637 33.333 0.00 0.00 0.00 3.46
774 801 7.845066 ACGACAAGAAATACTAATTCCTTCC 57.155 36.000 0.00 0.00 0.00 3.46
775 802 6.534079 ACGACAAGAAATACTAATTCCTTCCG 59.466 38.462 0.00 0.00 0.00 4.30
776 803 6.018994 CGACAAGAAATACTAATTCCTTCCGG 60.019 42.308 0.00 0.00 0.00 5.14
777 804 5.589050 ACAAGAAATACTAATTCCTTCCGGC 59.411 40.000 0.00 0.00 0.00 6.13
778 805 5.632034 AGAAATACTAATTCCTTCCGGCT 57.368 39.130 0.00 0.00 0.00 5.52
779 806 5.368989 AGAAATACTAATTCCTTCCGGCTG 58.631 41.667 0.00 0.00 0.00 4.85
780 807 3.771577 ATACTAATTCCTTCCGGCTGG 57.228 47.619 4.71 4.71 0.00 4.85
781 808 1.286248 ACTAATTCCTTCCGGCTGGT 58.714 50.000 12.43 0.00 36.30 4.00
782 809 2.474112 ACTAATTCCTTCCGGCTGGTA 58.526 47.619 12.43 0.00 36.30 3.25
783 810 2.841881 ACTAATTCCTTCCGGCTGGTAA 59.158 45.455 12.43 3.89 36.30 2.85
784 811 2.124277 AATTCCTTCCGGCTGGTAAC 57.876 50.000 12.43 0.00 36.30 2.50
785 812 1.286248 ATTCCTTCCGGCTGGTAACT 58.714 50.000 12.43 0.00 36.30 2.24
786 813 1.061546 TTCCTTCCGGCTGGTAACTT 58.938 50.000 12.43 0.00 36.30 2.66
787 814 0.323629 TCCTTCCGGCTGGTAACTTG 59.676 55.000 12.43 0.00 36.30 3.16
788 815 0.676782 CCTTCCGGCTGGTAACTTGG 60.677 60.000 12.43 2.44 36.30 3.61
789 816 0.323629 CTTCCGGCTGGTAACTTGGA 59.676 55.000 12.43 0.00 36.30 3.53
790 817 0.766131 TTCCGGCTGGTAACTTGGAA 59.234 50.000 12.43 0.00 36.30 3.53
791 818 0.766131 TCCGGCTGGTAACTTGGAAA 59.234 50.000 12.43 0.00 36.30 3.13
792 819 1.143277 TCCGGCTGGTAACTTGGAAAA 59.857 47.619 12.43 0.00 36.30 2.29
793 820 1.957877 CCGGCTGGTAACTTGGAAAAA 59.042 47.619 2.29 0.00 37.61 1.94
811 838 4.012138 AAAAATCCTTCCGGCCGG 57.988 55.556 39.13 39.13 0.00 6.13
812 839 1.076014 AAAAATCCTTCCGGCCGGT 59.924 52.632 41.57 21.87 36.47 5.28
813 840 1.248101 AAAAATCCTTCCGGCCGGTG 61.248 55.000 41.57 32.44 36.47 4.94
814 841 4.796495 AATCCTTCCGGCCGGTGC 62.796 66.667 41.57 0.00 36.47 5.01
828 855 3.543884 GGTGCACGATACAAGGGAA 57.456 52.632 11.45 0.00 0.00 3.97
829 856 1.369625 GGTGCACGATACAAGGGAAG 58.630 55.000 11.45 0.00 0.00 3.46
830 857 1.369625 GTGCACGATACAAGGGAAGG 58.630 55.000 0.00 0.00 0.00 3.46
831 858 0.392461 TGCACGATACAAGGGAAGGC 60.392 55.000 0.00 0.00 0.00 4.35
832 859 1.095807 GCACGATACAAGGGAAGGCC 61.096 60.000 0.00 0.00 0.00 5.19
833 860 0.810031 CACGATACAAGGGAAGGCCG 60.810 60.000 0.00 0.00 33.83 6.13
834 861 1.262640 ACGATACAAGGGAAGGCCGT 61.263 55.000 0.00 0.00 33.83 5.68
835 862 0.529992 CGATACAAGGGAAGGCCGTC 60.530 60.000 10.61 10.61 33.83 4.79
836 863 0.179054 GATACAAGGGAAGGCCGTCC 60.179 60.000 27.99 27.99 36.90 4.79
845 872 3.910039 AGGCCGTCCCTTGGTTTA 58.090 55.556 0.00 0.00 43.06 2.01
846 873 2.156920 AGGCCGTCCCTTGGTTTAA 58.843 52.632 0.00 0.00 43.06 1.52
847 874 0.702316 AGGCCGTCCCTTGGTTTAAT 59.298 50.000 0.00 0.00 43.06 1.40
848 875 1.076513 AGGCCGTCCCTTGGTTTAATT 59.923 47.619 0.00 0.00 43.06 1.40
849 876 2.309458 AGGCCGTCCCTTGGTTTAATTA 59.691 45.455 0.00 0.00 43.06 1.40
850 877 2.686405 GGCCGTCCCTTGGTTTAATTAG 59.314 50.000 0.00 0.00 0.00 1.73
851 878 2.686405 GCCGTCCCTTGGTTTAATTAGG 59.314 50.000 0.00 0.00 0.00 2.69
852 879 3.874977 GCCGTCCCTTGGTTTAATTAGGT 60.875 47.826 0.00 0.00 0.00 3.08
853 880 3.692593 CCGTCCCTTGGTTTAATTAGGTG 59.307 47.826 0.00 0.00 0.00 4.00
854 881 4.329392 CGTCCCTTGGTTTAATTAGGTGT 58.671 43.478 0.00 0.00 0.00 4.16
855 882 4.763279 CGTCCCTTGGTTTAATTAGGTGTT 59.237 41.667 0.00 0.00 0.00 3.32
856 883 5.106436 CGTCCCTTGGTTTAATTAGGTGTTC 60.106 44.000 0.00 0.00 0.00 3.18
857 884 5.184479 GTCCCTTGGTTTAATTAGGTGTTCC 59.816 44.000 0.00 0.00 0.00 3.62
858 885 5.081032 CCCTTGGTTTAATTAGGTGTTCCA 58.919 41.667 0.00 0.00 35.89 3.53
859 886 5.185056 CCCTTGGTTTAATTAGGTGTTCCAG 59.815 44.000 0.00 0.00 35.89 3.86
860 887 5.336451 CCTTGGTTTAATTAGGTGTTCCAGC 60.336 44.000 0.00 0.00 35.89 4.85
861 888 4.993028 TGGTTTAATTAGGTGTTCCAGCT 58.007 39.130 1.28 1.28 44.66 4.24
862 889 6.129414 TGGTTTAATTAGGTGTTCCAGCTA 57.871 37.500 0.00 0.00 42.44 3.32
863 890 6.177610 TGGTTTAATTAGGTGTTCCAGCTAG 58.822 40.000 3.69 0.00 43.70 3.42
864 891 5.066117 GGTTTAATTAGGTGTTCCAGCTAGC 59.934 44.000 6.62 6.62 43.70 3.42
865 892 3.283259 AATTAGGTGTTCCAGCTAGCC 57.717 47.619 12.13 0.00 43.70 3.93
866 893 1.952621 TTAGGTGTTCCAGCTAGCCT 58.047 50.000 12.13 0.77 43.70 4.58
867 894 1.195115 TAGGTGTTCCAGCTAGCCTG 58.805 55.000 12.13 9.06 42.44 4.85
874 901 3.617368 CAGCTAGCCTGGGTACGT 58.383 61.111 12.13 0.00 37.93 3.57
875 902 2.803203 CAGCTAGCCTGGGTACGTA 58.197 57.895 12.13 0.00 37.93 3.57
876 903 0.384669 CAGCTAGCCTGGGTACGTAC 59.615 60.000 17.56 17.56 37.93 3.67
877 904 1.099879 AGCTAGCCTGGGTACGTACG 61.100 60.000 18.98 15.01 0.00 3.67
878 905 1.379642 GCTAGCCTGGGTACGTACGT 61.380 60.000 25.98 25.98 0.00 3.57
879 906 0.379669 CTAGCCTGGGTACGTACGTG 59.620 60.000 30.25 13.64 0.00 4.49
880 907 0.322456 TAGCCTGGGTACGTACGTGT 60.322 55.000 30.25 7.45 0.00 4.49
881 908 0.322456 AGCCTGGGTACGTACGTGTA 60.322 55.000 30.25 9.17 0.00 2.90
882 909 0.179163 GCCTGGGTACGTACGTGTAC 60.179 60.000 30.25 20.62 43.15 2.90
893 920 4.036977 CGTGTACGTTGTTGGCCT 57.963 55.556 3.32 0.00 34.11 5.19
894 921 1.857364 CGTGTACGTTGTTGGCCTC 59.143 57.895 3.32 0.00 34.11 4.70
895 922 0.599204 CGTGTACGTTGTTGGCCTCT 60.599 55.000 3.32 0.00 34.11 3.69
896 923 0.865769 GTGTACGTTGTTGGCCTCTG 59.134 55.000 3.32 0.00 0.00 3.35
897 924 0.466543 TGTACGTTGTTGGCCTCTGT 59.533 50.000 3.32 0.00 0.00 3.41
898 925 1.687660 TGTACGTTGTTGGCCTCTGTA 59.312 47.619 3.32 0.00 0.00 2.74
899 926 2.064014 GTACGTTGTTGGCCTCTGTAC 58.936 52.381 3.32 5.01 0.00 2.90
900 927 0.756903 ACGTTGTTGGCCTCTGTACT 59.243 50.000 3.32 0.00 0.00 2.73
901 928 1.148310 CGTTGTTGGCCTCTGTACTG 58.852 55.000 3.32 0.00 0.00 2.74
902 929 1.540363 CGTTGTTGGCCTCTGTACTGT 60.540 52.381 3.32 0.00 0.00 3.55
903 930 2.288579 CGTTGTTGGCCTCTGTACTGTA 60.289 50.000 3.32 0.00 0.00 2.74
904 931 3.616560 CGTTGTTGGCCTCTGTACTGTAT 60.617 47.826 3.32 0.00 0.00 2.29
905 932 4.381185 CGTTGTTGGCCTCTGTACTGTATA 60.381 45.833 3.32 0.00 0.00 1.47
906 933 5.484715 GTTGTTGGCCTCTGTACTGTATAA 58.515 41.667 3.32 0.00 0.00 0.98
907 934 5.950544 TGTTGGCCTCTGTACTGTATAAT 57.049 39.130 3.32 0.00 0.00 1.28
908 935 5.914033 TGTTGGCCTCTGTACTGTATAATC 58.086 41.667 3.32 0.00 0.00 1.75
909 936 4.848562 TGGCCTCTGTACTGTATAATCG 57.151 45.455 3.32 0.00 0.00 3.34
910 937 4.466827 TGGCCTCTGTACTGTATAATCGA 58.533 43.478 3.32 0.00 0.00 3.59
911 938 5.077564 TGGCCTCTGTACTGTATAATCGAT 58.922 41.667 3.32 0.00 0.00 3.59
912 939 5.183331 TGGCCTCTGTACTGTATAATCGATC 59.817 44.000 3.32 0.00 0.00 3.69
913 940 5.416326 GGCCTCTGTACTGTATAATCGATCT 59.584 44.000 0.00 0.00 0.00 2.75
914 941 6.318628 GCCTCTGTACTGTATAATCGATCTG 58.681 44.000 0.00 0.00 0.00 2.90
915 942 6.318628 CCTCTGTACTGTATAATCGATCTGC 58.681 44.000 0.00 0.00 0.00 4.26
916 943 6.255596 TCTGTACTGTATAATCGATCTGCC 57.744 41.667 0.00 0.00 0.00 4.85
940 967 1.561717 CTCTCGGCGTCGATCGATCT 61.562 60.000 22.50 0.00 45.04 2.75
942 969 3.094058 CGGCGTCGATCGATCTGC 61.094 66.667 22.50 23.09 42.86 4.26
944 971 2.013483 GGCGTCGATCGATCTGCTG 61.013 63.158 27.44 10.85 42.86 4.41
945 972 2.643644 GCGTCGATCGATCTGCTGC 61.644 63.158 22.50 16.19 42.86 5.25
946 973 2.353074 CGTCGATCGATCTGCTGCG 61.353 63.158 22.50 14.05 42.86 5.18
948 975 3.401411 CGATCGATCTGCTGCGGC 61.401 66.667 22.43 11.65 39.26 6.53
950 977 2.587194 ATCGATCTGCTGCGGCAC 60.587 61.111 18.37 6.30 44.28 5.01
995 1022 0.731514 GCCGATCGACAAAGACGACA 60.732 55.000 18.66 0.00 42.37 4.35
1081 1108 1.583054 GTTCACCGTGAGCAAGAAGT 58.417 50.000 10.24 0.00 0.00 3.01
1117 1153 0.857287 CATCACAGACGATGCGGATG 59.143 55.000 0.00 1.64 36.64 3.51
1305 1347 3.184683 GAGCTGCTCTTCGCCACG 61.185 66.667 21.93 0.00 38.05 4.94
1338 1380 2.047179 GTGTTCTCCAGGGGCGTC 60.047 66.667 0.00 0.00 0.00 5.19
1520 1562 1.618837 GGATGAGCAGCCGGAGTATAA 59.381 52.381 5.05 0.00 0.00 0.98
1539 1581 0.395312 ACGTTAGTGTCAACCCAGGG 59.605 55.000 2.85 2.85 0.00 4.45
1554 1596 2.281276 GGGGTCGACCGTGCTTTT 60.281 61.111 27.68 0.00 41.60 2.27
1555 1597 2.613506 GGGGTCGACCGTGCTTTTG 61.614 63.158 27.68 0.00 41.60 2.44
1581 1623 0.179100 CGCTCACCGTGATTCTGGAT 60.179 55.000 0.62 0.00 0.00 3.41
1582 1624 1.293924 GCTCACCGTGATTCTGGATG 58.706 55.000 0.62 0.00 0.00 3.51
1583 1625 1.406069 GCTCACCGTGATTCTGGATGT 60.406 52.381 0.62 0.00 0.00 3.06
1584 1626 2.274437 CTCACCGTGATTCTGGATGTG 58.726 52.381 0.62 0.00 0.00 3.21
1585 1627 1.066215 TCACCGTGATTCTGGATGTGG 60.066 52.381 0.00 0.00 0.00 4.17
1586 1628 1.066215 CACCGTGATTCTGGATGTGGA 60.066 52.381 0.00 0.00 0.00 4.02
1587 1629 1.066143 ACCGTGATTCTGGATGTGGAC 60.066 52.381 3.02 0.00 0.00 4.02
1588 1630 1.208052 CCGTGATTCTGGATGTGGACT 59.792 52.381 0.00 0.00 0.00 3.85
1589 1631 2.355108 CCGTGATTCTGGATGTGGACTT 60.355 50.000 0.00 0.00 0.00 3.01
1590 1632 3.338249 CGTGATTCTGGATGTGGACTTT 58.662 45.455 0.00 0.00 0.00 2.66
1591 1633 3.125829 CGTGATTCTGGATGTGGACTTTG 59.874 47.826 0.00 0.00 0.00 2.77
1592 1634 4.074970 GTGATTCTGGATGTGGACTTTGT 58.925 43.478 0.00 0.00 0.00 2.83
1593 1635 5.245531 GTGATTCTGGATGTGGACTTTGTA 58.754 41.667 0.00 0.00 0.00 2.41
1594 1636 5.352569 GTGATTCTGGATGTGGACTTTGTAG 59.647 44.000 0.00 0.00 0.00 2.74
1595 1637 4.974645 TTCTGGATGTGGACTTTGTAGT 57.025 40.909 0.00 0.00 37.31 2.73
1596 1638 4.271696 TCTGGATGTGGACTTTGTAGTG 57.728 45.455 0.00 0.00 33.84 2.74
1597 1639 3.646162 TCTGGATGTGGACTTTGTAGTGT 59.354 43.478 0.00 0.00 33.84 3.55
1598 1640 3.738982 TGGATGTGGACTTTGTAGTGTG 58.261 45.455 0.00 0.00 33.84 3.82
1599 1641 3.135712 TGGATGTGGACTTTGTAGTGTGT 59.864 43.478 0.00 0.00 33.84 3.72
1600 1642 3.498397 GGATGTGGACTTTGTAGTGTGTG 59.502 47.826 0.00 0.00 33.84 3.82
1601 1643 2.912771 TGTGGACTTTGTAGTGTGTGG 58.087 47.619 0.00 0.00 33.84 4.17
1602 1644 2.502130 TGTGGACTTTGTAGTGTGTGGA 59.498 45.455 0.00 0.00 33.84 4.02
1603 1645 3.135712 TGTGGACTTTGTAGTGTGTGGAT 59.864 43.478 0.00 0.00 33.84 3.41
1604 1646 3.498397 GTGGACTTTGTAGTGTGTGGATG 59.502 47.826 0.00 0.00 33.84 3.51
1605 1647 3.389656 TGGACTTTGTAGTGTGTGGATGA 59.610 43.478 0.00 0.00 33.84 2.92
1606 1648 4.041567 TGGACTTTGTAGTGTGTGGATGAT 59.958 41.667 0.00 0.00 33.84 2.45
1607 1649 5.003804 GGACTTTGTAGTGTGTGGATGATT 58.996 41.667 0.00 0.00 33.84 2.57
1608 1650 5.106555 GGACTTTGTAGTGTGTGGATGATTG 60.107 44.000 0.00 0.00 33.84 2.67
1609 1651 4.761739 ACTTTGTAGTGTGTGGATGATTGG 59.238 41.667 0.00 0.00 31.99 3.16
1610 1652 4.365514 TTGTAGTGTGTGGATGATTGGT 57.634 40.909 0.00 0.00 0.00 3.67
1611 1653 3.673902 TGTAGTGTGTGGATGATTGGTG 58.326 45.455 0.00 0.00 0.00 4.17
1612 1654 2.205022 AGTGTGTGGATGATTGGTGG 57.795 50.000 0.00 0.00 0.00 4.61
1613 1655 0.527565 GTGTGTGGATGATTGGTGGC 59.472 55.000 0.00 0.00 0.00 5.01
1614 1656 0.112025 TGTGTGGATGATTGGTGGCA 59.888 50.000 0.00 0.00 0.00 4.92
1615 1657 0.813184 GTGTGGATGATTGGTGGCAG 59.187 55.000 0.00 0.00 0.00 4.85
1616 1658 0.405198 TGTGGATGATTGGTGGCAGT 59.595 50.000 0.00 0.00 0.00 4.40
1617 1659 0.813184 GTGGATGATTGGTGGCAGTG 59.187 55.000 0.00 0.00 0.00 3.66
1618 1660 0.323633 TGGATGATTGGTGGCAGTGG 60.324 55.000 0.00 0.00 0.00 4.00
1619 1661 0.323725 GGATGATTGGTGGCAGTGGT 60.324 55.000 0.00 0.00 0.00 4.16
1620 1662 1.549203 GATGATTGGTGGCAGTGGTT 58.451 50.000 0.00 0.00 0.00 3.67
1621 1663 1.895131 GATGATTGGTGGCAGTGGTTT 59.105 47.619 0.00 0.00 0.00 3.27
1622 1664 1.327303 TGATTGGTGGCAGTGGTTTC 58.673 50.000 0.00 0.00 0.00 2.78
1623 1665 1.327303 GATTGGTGGCAGTGGTTTCA 58.673 50.000 0.00 0.00 0.00 2.69
1624 1666 1.686052 GATTGGTGGCAGTGGTTTCAA 59.314 47.619 0.00 0.00 0.00 2.69
1625 1667 1.110442 TTGGTGGCAGTGGTTTCAAG 58.890 50.000 0.00 0.00 0.00 3.02
1626 1668 1.363807 GGTGGCAGTGGTTTCAAGC 59.636 57.895 0.00 0.00 0.00 4.01
1627 1669 1.363807 GTGGCAGTGGTTTCAAGCC 59.636 57.895 0.00 0.00 42.94 4.35
1628 1670 1.832167 TGGCAGTGGTTTCAAGCCC 60.832 57.895 0.00 0.00 42.35 5.19
1629 1671 1.531602 GGCAGTGGTTTCAAGCCCT 60.532 57.895 0.00 0.00 39.21 5.19
1630 1672 0.251165 GGCAGTGGTTTCAAGCCCTA 60.251 55.000 0.00 0.00 39.21 3.53
1631 1673 1.168714 GCAGTGGTTTCAAGCCCTAG 58.831 55.000 0.00 0.00 0.00 3.02
1632 1674 1.545651 GCAGTGGTTTCAAGCCCTAGT 60.546 52.381 0.00 0.00 0.00 2.57
1633 1675 2.863809 CAGTGGTTTCAAGCCCTAGTT 58.136 47.619 0.00 0.00 0.00 2.24
1634 1676 3.222603 CAGTGGTTTCAAGCCCTAGTTT 58.777 45.455 0.00 0.00 0.00 2.66
1635 1677 3.636764 CAGTGGTTTCAAGCCCTAGTTTT 59.363 43.478 0.00 0.00 0.00 2.43
1636 1678 3.636764 AGTGGTTTCAAGCCCTAGTTTTG 59.363 43.478 0.00 0.00 0.00 2.44
1637 1679 2.364002 TGGTTTCAAGCCCTAGTTTTGC 59.636 45.455 0.00 0.00 0.00 3.68
1638 1680 2.364002 GGTTTCAAGCCCTAGTTTTGCA 59.636 45.455 0.00 0.00 0.00 4.08
1639 1681 3.006859 GGTTTCAAGCCCTAGTTTTGCAT 59.993 43.478 0.00 0.00 0.00 3.96
1640 1682 3.940209 TTCAAGCCCTAGTTTTGCATG 57.060 42.857 0.00 0.00 0.00 4.06
1641 1683 2.875296 TCAAGCCCTAGTTTTGCATGT 58.125 42.857 0.00 0.00 0.00 3.21
1642 1684 2.557924 TCAAGCCCTAGTTTTGCATGTG 59.442 45.455 0.00 0.00 0.00 3.21
1643 1685 2.557924 CAAGCCCTAGTTTTGCATGTGA 59.442 45.455 0.00 0.00 0.00 3.58
1644 1686 2.162681 AGCCCTAGTTTTGCATGTGAC 58.837 47.619 0.00 0.00 0.00 3.67
1645 1687 1.135689 GCCCTAGTTTTGCATGTGACG 60.136 52.381 0.00 0.00 0.00 4.35
1646 1688 1.468520 CCCTAGTTTTGCATGTGACGG 59.531 52.381 0.00 0.00 0.00 4.79
1647 1689 2.151202 CCTAGTTTTGCATGTGACGGT 58.849 47.619 0.00 0.00 0.00 4.83
1648 1690 2.095768 CCTAGTTTTGCATGTGACGGTG 60.096 50.000 0.00 0.00 0.00 4.94
1649 1691 1.674359 AGTTTTGCATGTGACGGTGA 58.326 45.000 0.00 0.00 0.00 4.02
1650 1692 1.603802 AGTTTTGCATGTGACGGTGAG 59.396 47.619 0.00 0.00 0.00 3.51
1651 1693 1.333619 GTTTTGCATGTGACGGTGAGT 59.666 47.619 0.00 0.00 0.00 3.41
1660 1702 4.923068 ACGGTGAGTCAGACCTCA 57.077 55.556 0.00 0.00 39.11 3.86
1661 1703 3.127099 ACGGTGAGTCAGACCTCAA 57.873 52.632 0.00 0.00 42.81 3.02
1662 1704 1.633774 ACGGTGAGTCAGACCTCAAT 58.366 50.000 0.00 0.00 42.81 2.57
1663 1705 1.546476 ACGGTGAGTCAGACCTCAATC 59.454 52.381 0.00 0.00 42.81 2.67
1664 1706 1.821753 CGGTGAGTCAGACCTCAATCT 59.178 52.381 0.00 0.00 42.81 2.40
1665 1707 3.017442 CGGTGAGTCAGACCTCAATCTA 58.983 50.000 0.00 0.00 42.81 1.98
1666 1708 3.066064 CGGTGAGTCAGACCTCAATCTAG 59.934 52.174 0.00 0.00 42.81 2.43
1667 1709 4.020543 GGTGAGTCAGACCTCAATCTAGT 58.979 47.826 0.00 0.00 42.81 2.57
1668 1710 4.464597 GGTGAGTCAGACCTCAATCTAGTT 59.535 45.833 0.00 0.00 42.81 2.24
1669 1711 5.046950 GGTGAGTCAGACCTCAATCTAGTTT 60.047 44.000 0.00 0.00 42.81 2.66
1670 1712 5.866633 GTGAGTCAGACCTCAATCTAGTTTG 59.133 44.000 7.15 7.15 42.81 2.93
1671 1713 5.540337 TGAGTCAGACCTCAATCTAGTTTGT 59.460 40.000 12.21 0.00 38.49 2.83
1672 1714 5.788450 AGTCAGACCTCAATCTAGTTTGTG 58.212 41.667 12.21 10.08 0.00 3.33
1673 1715 5.305644 AGTCAGACCTCAATCTAGTTTGTGT 59.694 40.000 12.21 10.78 0.00 3.72
1674 1716 5.406780 GTCAGACCTCAATCTAGTTTGTGTG 59.593 44.000 12.21 6.09 0.00 3.82
1675 1717 5.304357 TCAGACCTCAATCTAGTTTGTGTGA 59.696 40.000 12.21 7.86 0.00 3.58
1676 1718 5.406780 CAGACCTCAATCTAGTTTGTGTGAC 59.593 44.000 12.21 6.16 0.00 3.67
1677 1719 5.305644 AGACCTCAATCTAGTTTGTGTGACT 59.694 40.000 12.21 7.75 0.00 3.41
1678 1720 5.300752 ACCTCAATCTAGTTTGTGTGACTG 58.699 41.667 12.21 1.94 0.00 3.51
1679 1721 5.163301 ACCTCAATCTAGTTTGTGTGACTGT 60.163 40.000 12.21 2.44 0.00 3.55
1680 1722 5.406780 CCTCAATCTAGTTTGTGTGACTGTC 59.593 44.000 12.21 0.00 0.00 3.51
1681 1723 4.982295 TCAATCTAGTTTGTGTGACTGTCG 59.018 41.667 12.21 0.00 0.00 4.35
1682 1724 3.364889 TCTAGTTTGTGTGACTGTCGG 57.635 47.619 2.98 0.00 0.00 4.79
1683 1725 1.792949 CTAGTTTGTGTGACTGTCGGC 59.207 52.381 2.98 0.00 0.00 5.54
1684 1726 0.107897 AGTTTGTGTGACTGTCGGCA 60.108 50.000 2.98 2.19 0.00 5.69
1693 1735 2.888863 CTGTCGGCAGTCTCCCTC 59.111 66.667 9.39 0.00 37.92 4.30
1694 1736 1.979155 CTGTCGGCAGTCTCCCTCA 60.979 63.158 9.39 0.00 37.92 3.86
1695 1737 1.305297 TGTCGGCAGTCTCCCTCAT 60.305 57.895 0.00 0.00 0.00 2.90
1696 1738 0.904865 TGTCGGCAGTCTCCCTCATT 60.905 55.000 0.00 0.00 0.00 2.57
1697 1739 0.250513 GTCGGCAGTCTCCCTCATTT 59.749 55.000 0.00 0.00 0.00 2.32
1698 1740 0.984230 TCGGCAGTCTCCCTCATTTT 59.016 50.000 0.00 0.00 0.00 1.82
1699 1741 1.089920 CGGCAGTCTCCCTCATTTTG 58.910 55.000 0.00 0.00 0.00 2.44
1700 1742 1.467920 GGCAGTCTCCCTCATTTTGG 58.532 55.000 0.00 0.00 0.00 3.28
1701 1743 1.272147 GGCAGTCTCCCTCATTTTGGT 60.272 52.381 0.00 0.00 0.00 3.67
1702 1744 1.815003 GCAGTCTCCCTCATTTTGGTG 59.185 52.381 0.00 0.00 0.00 4.17
1703 1745 1.815003 CAGTCTCCCTCATTTTGGTGC 59.185 52.381 0.00 0.00 0.00 5.01
1704 1746 1.707427 AGTCTCCCTCATTTTGGTGCT 59.293 47.619 0.00 0.00 0.00 4.40
1705 1747 2.087646 GTCTCCCTCATTTTGGTGCTC 58.912 52.381 0.00 0.00 0.00 4.26
1706 1748 1.089920 CTCCCTCATTTTGGTGCTCG 58.910 55.000 0.00 0.00 0.00 5.03
1707 1749 0.690192 TCCCTCATTTTGGTGCTCGA 59.310 50.000 0.00 0.00 0.00 4.04
1708 1750 1.089920 CCCTCATTTTGGTGCTCGAG 58.910 55.000 8.45 8.45 0.00 4.04
1709 1751 1.089920 CCTCATTTTGGTGCTCGAGG 58.910 55.000 15.58 0.00 34.54 4.63
1710 1752 1.611673 CCTCATTTTGGTGCTCGAGGT 60.612 52.381 15.58 0.00 36.18 3.85
1711 1753 1.734465 CTCATTTTGGTGCTCGAGGTC 59.266 52.381 15.58 0.00 0.00 3.85
1712 1754 1.347707 TCATTTTGGTGCTCGAGGTCT 59.652 47.619 15.58 0.00 0.00 3.85
1713 1755 1.734465 CATTTTGGTGCTCGAGGTCTC 59.266 52.381 15.58 0.00 0.00 3.36
1714 1756 0.034896 TTTTGGTGCTCGAGGTCTCC 59.965 55.000 15.58 9.19 0.00 3.71
1715 1757 1.118965 TTTGGTGCTCGAGGTCTCCA 61.119 55.000 15.58 11.72 0.00 3.86
1716 1758 1.118965 TTGGTGCTCGAGGTCTCCAA 61.119 55.000 15.58 16.70 33.42 3.53
1717 1759 1.079750 GGTGCTCGAGGTCTCCAAC 60.080 63.158 15.58 1.54 0.00 3.77
1726 1768 1.079057 GGTCTCCAACCTCGGAAGC 60.079 63.158 0.00 0.00 45.45 3.86
1727 1769 1.079057 GTCTCCAACCTCGGAAGCC 60.079 63.158 0.00 0.00 33.65 4.35
1728 1770 1.229209 TCTCCAACCTCGGAAGCCT 60.229 57.895 0.00 0.00 33.65 4.58
1729 1771 1.078848 CTCCAACCTCGGAAGCCTG 60.079 63.158 0.00 0.00 33.65 4.85
1730 1772 1.831652 CTCCAACCTCGGAAGCCTGT 61.832 60.000 0.00 0.00 33.65 4.00
1731 1773 1.672356 CCAACCTCGGAAGCCTGTG 60.672 63.158 0.00 0.00 0.00 3.66
1732 1774 1.371183 CAACCTCGGAAGCCTGTGA 59.629 57.895 0.00 0.00 0.00 3.58
1733 1775 0.250295 CAACCTCGGAAGCCTGTGAA 60.250 55.000 0.00 0.00 0.00 3.18
1734 1776 0.693049 AACCTCGGAAGCCTGTGAAT 59.307 50.000 0.00 0.00 0.00 2.57
1735 1777 0.250513 ACCTCGGAAGCCTGTGAATC 59.749 55.000 0.00 0.00 0.00 2.52
1736 1778 0.539051 CCTCGGAAGCCTGTGAATCT 59.461 55.000 0.00 0.00 0.00 2.40
1737 1779 1.757118 CCTCGGAAGCCTGTGAATCTA 59.243 52.381 0.00 0.00 0.00 1.98
1738 1780 2.223923 CCTCGGAAGCCTGTGAATCTAG 60.224 54.545 0.00 0.00 0.00 2.43
1739 1781 1.137086 TCGGAAGCCTGTGAATCTAGC 59.863 52.381 0.00 0.00 0.00 3.42
1740 1782 1.808133 CGGAAGCCTGTGAATCTAGCC 60.808 57.143 0.00 0.00 0.00 3.93
1741 1783 1.475930 GGAAGCCTGTGAATCTAGCCC 60.476 57.143 0.00 0.00 0.00 5.19
1742 1784 1.210478 GAAGCCTGTGAATCTAGCCCA 59.790 52.381 0.00 0.00 0.00 5.36
1743 1785 0.543749 AGCCTGTGAATCTAGCCCAC 59.456 55.000 0.00 0.00 0.00 4.61
1744 1786 0.253044 GCCTGTGAATCTAGCCCACA 59.747 55.000 9.98 9.98 38.34 4.17
1745 1787 2.014068 GCCTGTGAATCTAGCCCACAC 61.014 57.143 7.33 0.00 36.07 3.82
1746 1788 1.278985 CCTGTGAATCTAGCCCACACA 59.721 52.381 0.00 0.00 36.07 3.72
1747 1789 2.092753 CCTGTGAATCTAGCCCACACAT 60.093 50.000 0.00 0.00 39.97 3.21
1748 1790 2.941064 CTGTGAATCTAGCCCACACATG 59.059 50.000 0.00 0.00 39.97 3.21
1749 1791 1.672881 GTGAATCTAGCCCACACATGC 59.327 52.381 0.00 0.00 0.00 4.06
1750 1792 1.281577 TGAATCTAGCCCACACATGCA 59.718 47.619 0.00 0.00 0.00 3.96
1751 1793 1.672881 GAATCTAGCCCACACATGCAC 59.327 52.381 0.00 0.00 0.00 4.57
1752 1794 0.462581 ATCTAGCCCACACATGCACG 60.463 55.000 0.00 0.00 0.00 5.34
1753 1795 1.375908 CTAGCCCACACATGCACGT 60.376 57.895 0.00 0.00 0.00 4.49
1754 1796 1.638388 CTAGCCCACACATGCACGTG 61.638 60.000 12.07 12.07 42.81 4.49
1758 1800 3.364441 CACACATGCACGTGGGGG 61.364 66.667 18.27 0.00 41.38 5.40
1769 1811 3.670377 GTGGGGGCGCAACACTTC 61.670 66.667 10.83 0.00 32.58 3.01
1770 1812 4.966787 TGGGGGCGCAACACTTCC 62.967 66.667 10.83 0.00 0.00 3.46
1773 1815 3.284449 GGGCGCAACACTTCCGTT 61.284 61.111 10.83 0.00 0.00 4.44
1775 1817 2.051345 GCGCAACACTTCCGTTGG 60.051 61.111 0.30 0.00 45.21 3.77
1776 1818 2.051345 CGCAACACTTCCGTTGGC 60.051 61.111 5.99 0.00 45.21 4.52
1777 1819 2.829206 CGCAACACTTCCGTTGGCA 61.829 57.895 5.99 0.00 45.21 4.92
1778 1820 1.435515 GCAACACTTCCGTTGGCAA 59.564 52.632 0.00 0.00 45.21 4.52
1779 1821 0.031994 GCAACACTTCCGTTGGCAAT 59.968 50.000 1.92 0.00 45.21 3.56
1780 1822 1.769733 CAACACTTCCGTTGGCAATG 58.230 50.000 12.54 12.54 42.10 2.82
1781 1823 1.336440 CAACACTTCCGTTGGCAATGA 59.664 47.619 20.72 9.51 42.10 2.57
1782 1824 1.238439 ACACTTCCGTTGGCAATGAG 58.762 50.000 20.72 12.99 0.00 2.90
1783 1825 1.202758 ACACTTCCGTTGGCAATGAGA 60.203 47.619 20.72 12.78 0.00 3.27
1784 1826 2.086869 CACTTCCGTTGGCAATGAGAT 58.913 47.619 20.72 0.71 0.00 2.75
1785 1827 2.086869 ACTTCCGTTGGCAATGAGATG 58.913 47.619 20.72 17.52 0.00 2.90
1786 1828 2.086869 CTTCCGTTGGCAATGAGATGT 58.913 47.619 20.72 0.00 0.00 3.06
1787 1829 1.452110 TCCGTTGGCAATGAGATGTG 58.548 50.000 20.72 3.07 0.00 3.21
1788 1830 1.167851 CCGTTGGCAATGAGATGTGT 58.832 50.000 20.72 0.00 0.00 3.72
1789 1831 1.541147 CCGTTGGCAATGAGATGTGTT 59.459 47.619 20.72 0.00 0.00 3.32
1790 1832 2.587956 CGTTGGCAATGAGATGTGTTG 58.412 47.619 14.26 0.00 0.00 3.33
1791 1833 2.226200 CGTTGGCAATGAGATGTGTTGA 59.774 45.455 14.26 0.00 0.00 3.18
1792 1834 3.119743 CGTTGGCAATGAGATGTGTTGAT 60.120 43.478 14.26 0.00 0.00 2.57
1793 1835 4.418392 GTTGGCAATGAGATGTGTTGATC 58.582 43.478 1.92 0.00 0.00 2.92
1794 1836 3.959293 TGGCAATGAGATGTGTTGATCT 58.041 40.909 0.00 0.00 35.27 2.75
1795 1837 5.101648 TGGCAATGAGATGTGTTGATCTA 57.898 39.130 0.00 0.00 32.57 1.98
1796 1838 5.121105 TGGCAATGAGATGTGTTGATCTAG 58.879 41.667 0.00 0.00 32.57 2.43
1797 1839 4.024218 GGCAATGAGATGTGTTGATCTAGC 60.024 45.833 0.00 0.00 32.57 3.42
1798 1840 4.573607 GCAATGAGATGTGTTGATCTAGCA 59.426 41.667 0.00 0.00 32.57 3.49
1799 1841 5.238868 GCAATGAGATGTGTTGATCTAGCAT 59.761 40.000 0.00 0.00 32.57 3.79
1800 1842 6.659776 CAATGAGATGTGTTGATCTAGCATG 58.340 40.000 0.00 0.00 32.57 4.06
1801 1843 5.603170 TGAGATGTGTTGATCTAGCATGA 57.397 39.130 0.00 0.00 32.57 3.07
1802 1844 6.170846 TGAGATGTGTTGATCTAGCATGAT 57.829 37.500 0.00 0.00 32.57 2.45
1803 1845 5.989777 TGAGATGTGTTGATCTAGCATGATG 59.010 40.000 0.00 0.00 32.57 3.07
1804 1846 5.306394 AGATGTGTTGATCTAGCATGATGG 58.694 41.667 0.00 0.00 30.50 3.51
1805 1847 4.492494 TGTGTTGATCTAGCATGATGGT 57.508 40.909 1.66 1.66 0.00 3.55
1806 1848 5.612725 TGTGTTGATCTAGCATGATGGTA 57.387 39.130 4.13 4.13 0.00 3.25
1807 1849 6.178607 TGTGTTGATCTAGCATGATGGTAT 57.821 37.500 4.66 0.00 29.21 2.73
1808 1850 6.226052 TGTGTTGATCTAGCATGATGGTATC 58.774 40.000 4.66 2.87 29.21 2.24
1809 1851 6.042437 TGTGTTGATCTAGCATGATGGTATCT 59.958 38.462 4.66 0.00 29.21 1.98
1810 1852 6.933521 GTGTTGATCTAGCATGATGGTATCTT 59.066 38.462 4.66 0.00 29.21 2.40
1811 1853 7.443575 GTGTTGATCTAGCATGATGGTATCTTT 59.556 37.037 4.66 0.00 29.21 2.52
1812 1854 7.443272 TGTTGATCTAGCATGATGGTATCTTTG 59.557 37.037 4.66 0.00 29.21 2.77
1813 1855 7.071069 TGATCTAGCATGATGGTATCTTTGT 57.929 36.000 4.66 0.00 29.21 2.83
1814 1856 6.932960 TGATCTAGCATGATGGTATCTTTGTG 59.067 38.462 4.66 0.00 29.21 3.33
1815 1857 5.614308 TCTAGCATGATGGTATCTTTGTGG 58.386 41.667 4.66 0.00 29.21 4.17
1816 1858 2.954318 AGCATGATGGTATCTTTGTGGC 59.046 45.455 0.00 0.00 0.00 5.01
1817 1859 2.035066 GCATGATGGTATCTTTGTGGCC 59.965 50.000 0.00 0.00 0.00 5.36
1818 1860 2.435372 TGATGGTATCTTTGTGGCCC 57.565 50.000 0.00 0.00 0.00 5.80
1819 1861 1.064017 TGATGGTATCTTTGTGGCCCC 60.064 52.381 0.00 0.00 0.00 5.80
1820 1862 0.106719 ATGGTATCTTTGTGGCCCCG 60.107 55.000 0.00 0.00 0.00 5.73
1821 1863 1.301954 GGTATCTTTGTGGCCCCGT 59.698 57.895 0.00 0.00 0.00 5.28
1822 1864 1.029947 GGTATCTTTGTGGCCCCGTG 61.030 60.000 0.00 0.00 0.00 4.94
1823 1865 1.377987 TATCTTTGTGGCCCCGTGC 60.378 57.895 0.00 0.00 40.16 5.34
1824 1866 1.847798 TATCTTTGTGGCCCCGTGCT 61.848 55.000 0.00 0.00 40.92 4.40
1825 1867 3.673484 CTTTGTGGCCCCGTGCTG 61.673 66.667 0.00 0.00 40.92 4.41
1835 1877 4.704833 CCGTGCTGGGACTGGTGG 62.705 72.222 0.00 0.00 0.00 4.61
1836 1878 3.625897 CGTGCTGGGACTGGTGGA 61.626 66.667 0.00 0.00 0.00 4.02
1837 1879 2.959484 CGTGCTGGGACTGGTGGAT 61.959 63.158 0.00 0.00 0.00 3.41
1838 1880 1.377725 GTGCTGGGACTGGTGGATG 60.378 63.158 0.00 0.00 0.00 3.51
1839 1881 2.439156 GCTGGGACTGGTGGATGC 60.439 66.667 0.00 0.00 0.00 3.91
1840 1882 3.080641 CTGGGACTGGTGGATGCA 58.919 61.111 0.00 0.00 0.00 3.96
1841 1883 1.611419 CTGGGACTGGTGGATGCAT 59.389 57.895 0.00 0.00 0.00 3.96
1842 1884 0.839277 CTGGGACTGGTGGATGCATA 59.161 55.000 0.00 0.00 0.00 3.14
1843 1885 0.839277 TGGGACTGGTGGATGCATAG 59.161 55.000 0.00 0.00 0.00 2.23
1844 1886 1.131638 GGGACTGGTGGATGCATAGA 58.868 55.000 0.00 0.00 0.00 1.98
1845 1887 1.701847 GGGACTGGTGGATGCATAGAT 59.298 52.381 0.00 0.00 0.00 1.98
1846 1888 2.551721 GGGACTGGTGGATGCATAGATG 60.552 54.545 0.00 0.00 0.00 2.90
1847 1889 2.105477 GGACTGGTGGATGCATAGATGT 59.895 50.000 0.00 0.00 0.00 3.06
1848 1890 3.434167 GGACTGGTGGATGCATAGATGTT 60.434 47.826 0.00 0.00 0.00 2.71
1849 1891 3.548770 ACTGGTGGATGCATAGATGTTG 58.451 45.455 0.00 0.00 0.00 3.33
1850 1892 3.200605 ACTGGTGGATGCATAGATGTTGA 59.799 43.478 0.00 0.00 0.00 3.18
1851 1893 3.812262 TGGTGGATGCATAGATGTTGAG 58.188 45.455 0.00 0.00 0.00 3.02
1852 1894 3.144506 GGTGGATGCATAGATGTTGAGG 58.855 50.000 0.00 0.00 0.00 3.86
1853 1895 3.434167 GGTGGATGCATAGATGTTGAGGT 60.434 47.826 0.00 0.00 0.00 3.85
1854 1896 3.562973 GTGGATGCATAGATGTTGAGGTG 59.437 47.826 0.00 0.00 0.00 4.00
1855 1897 3.455543 TGGATGCATAGATGTTGAGGTGA 59.544 43.478 0.00 0.00 0.00 4.02
1856 1898 4.063689 GGATGCATAGATGTTGAGGTGAG 58.936 47.826 0.00 0.00 0.00 3.51
1857 1899 3.548745 TGCATAGATGTTGAGGTGAGG 57.451 47.619 0.00 0.00 0.00 3.86
1858 1900 2.216898 GCATAGATGTTGAGGTGAGGC 58.783 52.381 0.00 0.00 0.00 4.70
1859 1901 2.843701 CATAGATGTTGAGGTGAGGCC 58.156 52.381 0.00 0.00 37.58 5.19
1860 1902 1.951209 TAGATGTTGAGGTGAGGCCA 58.049 50.000 5.01 0.00 40.61 5.36
1861 1903 0.617413 AGATGTTGAGGTGAGGCCAG 59.383 55.000 5.01 0.00 40.61 4.85
1862 1904 0.615331 GATGTTGAGGTGAGGCCAGA 59.385 55.000 5.01 0.00 40.61 3.86
1863 1905 0.617413 ATGTTGAGGTGAGGCCAGAG 59.383 55.000 5.01 0.00 40.61 3.35
1864 1906 1.298014 GTTGAGGTGAGGCCAGAGG 59.702 63.158 5.01 0.00 40.61 3.69
1865 1907 1.920325 TTGAGGTGAGGCCAGAGGG 60.920 63.158 5.01 0.00 40.61 4.30
1866 1908 2.284995 GAGGTGAGGCCAGAGGGT 60.285 66.667 5.01 0.00 40.61 4.34
1867 1909 2.608988 AGGTGAGGCCAGAGGGTG 60.609 66.667 5.01 0.00 40.61 4.61
1887 1929 4.479993 GAGGCCATGCGCTCAGGT 62.480 66.667 9.73 0.00 37.74 4.00
1888 1930 3.083349 AGGCCATGCGCTCAGGTA 61.083 61.111 9.73 0.00 37.74 3.08
1889 1931 2.124736 GGCCATGCGCTCAGGTAA 60.125 61.111 9.73 0.00 37.74 2.85
1890 1932 2.472909 GGCCATGCGCTCAGGTAAC 61.473 63.158 9.73 0.00 37.74 2.50
1891 1933 2.876368 GGCCATGCGCTCAGGTAACT 62.876 60.000 9.73 0.00 43.98 2.24
1912 1954 1.878953 CCAAACTCGGCAAGTAGTGT 58.121 50.000 0.00 0.00 37.17 3.55
1913 1955 1.531149 CCAAACTCGGCAAGTAGTGTG 59.469 52.381 0.00 0.00 37.17 3.82
1914 1956 2.210116 CAAACTCGGCAAGTAGTGTGT 58.790 47.619 0.00 0.00 37.17 3.72
1915 1957 2.612212 CAAACTCGGCAAGTAGTGTGTT 59.388 45.455 0.00 0.00 37.17 3.32
1916 1958 2.614829 ACTCGGCAAGTAGTGTGTTT 57.385 45.000 0.00 0.00 36.07 2.83
1917 1959 2.480845 ACTCGGCAAGTAGTGTGTTTC 58.519 47.619 0.00 0.00 36.07 2.78
1918 1960 2.159014 ACTCGGCAAGTAGTGTGTTTCA 60.159 45.455 0.00 0.00 36.07 2.69
1919 1961 2.869801 CTCGGCAAGTAGTGTGTTTCAA 59.130 45.455 0.00 0.00 0.00 2.69
1920 1962 2.610374 TCGGCAAGTAGTGTGTTTCAAC 59.390 45.455 0.00 0.00 0.00 3.18
1921 1963 2.598907 CGGCAAGTAGTGTGTTTCAACG 60.599 50.000 0.00 0.00 0.00 4.10
1922 1964 2.610374 GGCAAGTAGTGTGTTTCAACGA 59.390 45.455 0.00 0.00 0.00 3.85
1923 1965 3.303132 GGCAAGTAGTGTGTTTCAACGAG 60.303 47.826 0.00 0.00 0.00 4.18
1924 1966 3.303132 GCAAGTAGTGTGTTTCAACGAGG 60.303 47.826 0.00 0.00 0.00 4.63
1925 1967 3.814005 AGTAGTGTGTTTCAACGAGGT 57.186 42.857 0.00 0.00 0.00 3.85
1926 1968 3.454375 AGTAGTGTGTTTCAACGAGGTG 58.546 45.455 0.00 0.00 0.00 4.00
1927 1969 1.663695 AGTGTGTTTCAACGAGGTGG 58.336 50.000 0.00 0.00 0.00 4.61
1928 1970 1.208535 AGTGTGTTTCAACGAGGTGGA 59.791 47.619 0.00 0.00 0.00 4.02
1929 1971 2.011222 GTGTGTTTCAACGAGGTGGAA 58.989 47.619 0.00 0.00 0.00 3.53
1930 1972 2.420722 GTGTGTTTCAACGAGGTGGAAA 59.579 45.455 0.00 0.00 33.64 3.13
1931 1973 3.066203 GTGTGTTTCAACGAGGTGGAAAT 59.934 43.478 1.97 0.00 37.72 2.17
1932 1974 3.066064 TGTGTTTCAACGAGGTGGAAATG 59.934 43.478 1.97 0.00 37.72 2.32
1933 1975 3.066203 GTGTTTCAACGAGGTGGAAATGT 59.934 43.478 1.97 0.00 37.72 2.71
1934 1976 3.066064 TGTTTCAACGAGGTGGAAATGTG 59.934 43.478 1.97 0.00 37.72 3.21
1935 1977 2.920724 TCAACGAGGTGGAAATGTGA 57.079 45.000 0.00 0.00 0.00 3.58
1936 1978 3.417069 TCAACGAGGTGGAAATGTGAT 57.583 42.857 0.00 0.00 0.00 3.06
1937 1979 3.073678 TCAACGAGGTGGAAATGTGATG 58.926 45.455 0.00 0.00 0.00 3.07
1938 1980 1.453155 ACGAGGTGGAAATGTGATGC 58.547 50.000 0.00 0.00 0.00 3.91
1939 1981 1.003580 ACGAGGTGGAAATGTGATGCT 59.996 47.619 0.00 0.00 0.00 3.79
1940 1982 2.236146 ACGAGGTGGAAATGTGATGCTA 59.764 45.455 0.00 0.00 0.00 3.49
1941 1983 2.868583 CGAGGTGGAAATGTGATGCTAG 59.131 50.000 0.00 0.00 0.00 3.42
1942 1984 3.209410 GAGGTGGAAATGTGATGCTAGG 58.791 50.000 0.00 0.00 0.00 3.02
1943 1985 2.092212 AGGTGGAAATGTGATGCTAGGG 60.092 50.000 0.00 0.00 0.00 3.53
1944 1986 2.301346 GTGGAAATGTGATGCTAGGGG 58.699 52.381 0.00 0.00 0.00 4.79
1945 1987 1.322442 GGAAATGTGATGCTAGGGGC 58.678 55.000 0.00 0.00 42.22 5.80
1954 1996 4.442038 GCTAGGGGCAAAAGCCTT 57.558 55.556 6.45 0.00 41.35 4.35
1955 1997 1.893062 GCTAGGGGCAAAAGCCTTG 59.107 57.895 6.45 0.00 41.35 3.61
1956 1998 0.900182 GCTAGGGGCAAAAGCCTTGT 60.900 55.000 6.45 0.00 41.35 3.16
1957 1999 0.890683 CTAGGGGCAAAAGCCTTGTG 59.109 55.000 6.45 0.00 0.00 3.33
1958 2000 1.184970 TAGGGGCAAAAGCCTTGTGC 61.185 55.000 11.31 11.31 41.71 4.57
1969 2011 0.166814 GCCTTGTGCTAGCTTTGTCG 59.833 55.000 17.23 0.20 36.87 4.35
1970 2012 0.798776 CCTTGTGCTAGCTTTGTCGG 59.201 55.000 17.23 5.21 0.00 4.79
1971 2013 0.166814 CTTGTGCTAGCTTTGTCGGC 59.833 55.000 17.23 0.00 0.00 5.54
1972 2014 0.533978 TTGTGCTAGCTTTGTCGGCA 60.534 50.000 17.23 0.00 0.00 5.69
1973 2015 1.497722 GTGCTAGCTTTGTCGGCAC 59.502 57.895 17.23 0.00 44.53 5.01
1974 2016 0.951040 GTGCTAGCTTTGTCGGCACT 60.951 55.000 17.23 0.00 46.39 4.40
1975 2017 0.950555 TGCTAGCTTTGTCGGCACTG 60.951 55.000 17.23 0.00 0.00 3.66
1976 2018 0.670546 GCTAGCTTTGTCGGCACTGA 60.671 55.000 7.70 0.00 0.00 3.41
1977 2019 1.071605 CTAGCTTTGTCGGCACTGAC 58.928 55.000 2.53 2.53 39.37 3.51
1978 2020 0.666274 TAGCTTTGTCGGCACTGACG 60.666 55.000 0.00 0.00 41.87 4.35
1979 2021 1.954146 GCTTTGTCGGCACTGACGA 60.954 57.895 1.80 1.80 42.47 4.20
1984 2026 3.611674 TCGGCACTGACGAAGGCA 61.612 61.111 3.93 0.00 41.42 4.75
1985 2027 2.664851 CGGCACTGACGAAGGCAA 60.665 61.111 0.00 0.00 35.20 4.52
1986 2028 2.034879 CGGCACTGACGAAGGCAAT 61.035 57.895 0.00 0.00 35.20 3.56
1987 2029 1.503542 GGCACTGACGAAGGCAATG 59.496 57.895 0.00 0.00 0.00 2.82
1988 2030 1.154150 GCACTGACGAAGGCAATGC 60.154 57.895 0.00 0.00 0.00 3.56
2010 2052 2.894387 GAGCATCTCCAGCCGTGC 60.894 66.667 0.00 0.00 37.84 5.34
2011 2053 4.479993 AGCATCTCCAGCCGTGCC 62.480 66.667 0.00 0.00 38.31 5.01
2013 2055 4.864334 CATCTCCAGCCGTGCCCC 62.864 72.222 0.00 0.00 0.00 5.80
2027 2069 3.996621 CCCCCAACAGCACCCCAT 61.997 66.667 0.00 0.00 0.00 4.00
2028 2070 2.362889 CCCCAACAGCACCCCATC 60.363 66.667 0.00 0.00 0.00 3.51
2029 2071 2.362889 CCCAACAGCACCCCATCC 60.363 66.667 0.00 0.00 0.00 3.51
2030 2072 2.362889 CCAACAGCACCCCATCCC 60.363 66.667 0.00 0.00 0.00 3.85
2031 2073 2.362889 CAACAGCACCCCATCCCC 60.363 66.667 0.00 0.00 0.00 4.81
2032 2074 3.672503 AACAGCACCCCATCCCCC 61.673 66.667 0.00 0.00 0.00 5.40
2033 2075 4.701437 ACAGCACCCCATCCCCCT 62.701 66.667 0.00 0.00 0.00 4.79
2202 2295 3.164977 TCTGGCCCACACCGTCAA 61.165 61.111 0.00 0.00 0.00 3.18
2218 2311 1.333619 GTCAAGCGAAAAGTCAAGCCA 59.666 47.619 0.00 0.00 0.00 4.75
2219 2312 1.603802 TCAAGCGAAAAGTCAAGCCAG 59.396 47.619 0.00 0.00 0.00 4.85
2308 2403 0.620556 CCCACCACCACTAGATTGCT 59.379 55.000 0.00 0.00 0.00 3.91
2313 2409 3.624861 CACCACCACTAGATTGCTCATTC 59.375 47.826 0.00 0.00 0.00 2.67
2316 2412 3.118112 CACCACTAGATTGCTCATTCCCT 60.118 47.826 0.00 0.00 0.00 4.20
2321 2417 1.450531 GATTGCTCATTCCCTGCCGG 61.451 60.000 0.00 0.00 0.00 6.13
2322 2418 1.925285 ATTGCTCATTCCCTGCCGGA 61.925 55.000 5.05 0.00 39.68 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.862541 TGCCATCTGCTTACAAGTGTT 58.137 42.857 0.00 0.00 42.00 3.32
3 4 2.554032 GTTGCCATCTGCTTACAAGTGT 59.446 45.455 0.00 0.00 42.00 3.55
5 6 3.077359 GAGTTGCCATCTGCTTACAAGT 58.923 45.455 0.00 0.00 42.00 3.16
128 130 8.370266 TGTATGGTTTGGTCTACTACAGTTAT 57.630 34.615 0.00 0.00 0.00 1.89
188 190 1.630369 TGCCATCTTAGGTCAAGTGCT 59.370 47.619 0.00 0.00 35.58 4.40
235 238 2.356135 GTTGCCATGTCGGACAACTAT 58.644 47.619 15.72 0.00 43.12 2.12
515 542 2.665000 CCTGTGTGGCACGGAGAT 59.335 61.111 13.77 0.00 42.79 2.75
548 575 1.066502 CACATGTGTGGTGTATCGGGA 60.067 52.381 18.03 0.00 42.10 5.14
564 591 0.810031 GACGCCGATAACTGCCACAT 60.810 55.000 0.00 0.00 0.00 3.21
594 621 9.984190 GGGTTTAAAGTGTAAATACAATTCCAA 57.016 29.630 6.71 2.79 42.78 3.53
595 622 8.586744 GGGGTTTAAAGTGTAAATACAATTCCA 58.413 33.333 6.71 0.00 42.78 3.53
596 623 7.756272 CGGGGTTTAAAGTGTAAATACAATTCC 59.244 37.037 6.71 4.31 42.78 3.01
597 624 7.274033 GCGGGGTTTAAAGTGTAAATACAATTC 59.726 37.037 6.71 0.00 42.78 2.17
598 625 7.092079 GCGGGGTTTAAAGTGTAAATACAATT 58.908 34.615 0.76 0.76 45.11 2.32
599 626 6.350361 GGCGGGGTTTAAAGTGTAAATACAAT 60.350 38.462 0.00 0.00 38.04 2.71
600 627 5.048154 GGCGGGGTTTAAAGTGTAAATACAA 60.048 40.000 0.00 0.00 38.04 2.41
601 628 4.458642 GGCGGGGTTTAAAGTGTAAATACA 59.541 41.667 0.00 0.00 0.00 2.29
602 629 4.437255 CGGCGGGGTTTAAAGTGTAAATAC 60.437 45.833 0.00 0.00 0.00 1.89
603 630 3.688673 CGGCGGGGTTTAAAGTGTAAATA 59.311 43.478 0.00 0.00 0.00 1.40
604 631 2.488937 CGGCGGGGTTTAAAGTGTAAAT 59.511 45.455 0.00 0.00 0.00 1.40
605 632 1.878734 CGGCGGGGTTTAAAGTGTAAA 59.121 47.619 0.00 0.00 0.00 2.01
606 633 1.521580 CGGCGGGGTTTAAAGTGTAA 58.478 50.000 0.00 0.00 0.00 2.41
607 634 0.321475 CCGGCGGGGTTTAAAGTGTA 60.321 55.000 20.56 0.00 0.00 2.90
608 635 1.601477 CCGGCGGGGTTTAAAGTGT 60.601 57.895 20.56 0.00 0.00 3.55
609 636 2.985117 GCCGGCGGGGTTTAAAGTG 61.985 63.158 29.48 0.00 38.44 3.16
610 637 2.674033 GCCGGCGGGGTTTAAAGT 60.674 61.111 29.48 0.00 38.44 2.66
611 638 3.445687 GGCCGGCGGGGTTTAAAG 61.446 66.667 29.48 0.00 38.44 1.85
623 650 4.697756 TTGCTTGAGTCCGGCCGG 62.698 66.667 39.13 39.13 0.00 6.13
624 651 3.121030 CTTGCTTGAGTCCGGCCG 61.121 66.667 21.04 21.04 0.00 6.13
625 652 3.435186 GCTTGCTTGAGTCCGGCC 61.435 66.667 0.00 0.00 0.00 6.13
626 653 2.359230 AGCTTGCTTGAGTCCGGC 60.359 61.111 0.00 0.00 0.00 6.13
627 654 1.743252 GGAGCTTGCTTGAGTCCGG 60.743 63.158 0.00 0.00 0.00 5.14
628 655 0.392193 ATGGAGCTTGCTTGAGTCCG 60.392 55.000 0.00 0.00 0.00 4.79
629 656 1.093159 CATGGAGCTTGCTTGAGTCC 58.907 55.000 0.00 0.00 0.00 3.85
630 657 1.093159 CCATGGAGCTTGCTTGAGTC 58.907 55.000 5.56 0.00 0.00 3.36
631 658 0.323178 CCCATGGAGCTTGCTTGAGT 60.323 55.000 15.22 0.00 0.00 3.41
632 659 1.664321 GCCCATGGAGCTTGCTTGAG 61.664 60.000 15.22 0.00 0.00 3.02
633 660 1.679977 GCCCATGGAGCTTGCTTGA 60.680 57.895 15.22 0.00 0.00 3.02
634 661 0.394762 TAGCCCATGGAGCTTGCTTG 60.395 55.000 26.32 4.04 41.83 4.01
635 662 0.332632 TTAGCCCATGGAGCTTGCTT 59.667 50.000 26.32 10.02 41.83 3.91
636 663 0.332632 TTTAGCCCATGGAGCTTGCT 59.667 50.000 26.32 21.13 41.83 3.91
637 664 0.457443 GTTTAGCCCATGGAGCTTGC 59.543 55.000 26.32 15.73 41.83 4.01
638 665 2.019984 GAGTTTAGCCCATGGAGCTTG 58.980 52.381 26.32 6.79 41.83 4.01
639 666 1.918957 AGAGTTTAGCCCATGGAGCTT 59.081 47.619 26.32 13.04 41.83 3.74
640 667 1.589414 AGAGTTTAGCCCATGGAGCT 58.411 50.000 25.04 25.04 44.49 4.09
641 668 2.019984 CAAGAGTTTAGCCCATGGAGC 58.980 52.381 15.22 15.22 0.00 4.70
642 669 3.274288 GTCAAGAGTTTAGCCCATGGAG 58.726 50.000 15.22 4.39 0.00 3.86
643 670 2.354704 CGTCAAGAGTTTAGCCCATGGA 60.355 50.000 15.22 0.00 0.00 3.41
644 671 2.009774 CGTCAAGAGTTTAGCCCATGG 58.990 52.381 4.14 4.14 0.00 3.66
645 672 2.932614 CTCGTCAAGAGTTTAGCCCATG 59.067 50.000 0.00 0.00 41.99 3.66
646 673 3.252974 CTCGTCAAGAGTTTAGCCCAT 57.747 47.619 0.00 0.00 41.99 4.00
647 674 2.743636 CTCGTCAAGAGTTTAGCCCA 57.256 50.000 0.00 0.00 41.99 5.36
656 683 8.566008 AAAAATCATTTTGAACTCGTCAAGAG 57.434 30.769 0.00 0.00 46.85 2.85
657 684 8.187480 TGAAAAATCATTTTGAACTCGTCAAGA 58.813 29.630 0.00 0.00 46.85 3.02
658 685 8.338985 TGAAAAATCATTTTGAACTCGTCAAG 57.661 30.769 0.00 0.00 46.85 3.02
659 686 8.694975 TTGAAAAATCATTTTGAACTCGTCAA 57.305 26.923 0.00 0.00 44.74 3.18
660 687 8.694975 TTTGAAAAATCATTTTGAACTCGTCA 57.305 26.923 0.00 0.00 38.83 4.35
661 688 9.019764 TCTTTGAAAAATCATTTTGAACTCGTC 57.980 29.630 0.00 0.00 38.83 4.20
662 689 8.925161 TCTTTGAAAAATCATTTTGAACTCGT 57.075 26.923 0.00 0.00 38.83 4.18
663 690 9.839589 CTTCTTTGAAAAATCATTTTGAACTCG 57.160 29.630 0.00 0.00 38.83 4.18
671 698 9.434420 TGTCACAACTTCTTTGAAAAATCATTT 57.566 25.926 0.00 0.00 38.73 2.32
672 699 8.872845 GTGTCACAACTTCTTTGAAAAATCATT 58.127 29.630 0.00 0.00 38.73 2.57
673 700 8.034215 TGTGTCACAACTTCTTTGAAAAATCAT 58.966 29.630 2.31 0.00 38.73 2.45
674 701 7.374272 TGTGTCACAACTTCTTTGAAAAATCA 58.626 30.769 2.31 0.00 38.73 2.57
675 702 7.810766 TGTGTCACAACTTCTTTGAAAAATC 57.189 32.000 2.31 0.00 38.73 2.17
676 703 8.776376 AATGTGTCACAACTTCTTTGAAAAAT 57.224 26.923 10.28 0.00 38.73 1.82
677 704 8.600449 AAATGTGTCACAACTTCTTTGAAAAA 57.400 26.923 10.28 0.00 38.73 1.94
678 705 8.600449 AAAATGTGTCACAACTTCTTTGAAAA 57.400 26.923 10.28 0.00 38.73 2.29
679 706 8.600449 AAAAATGTGTCACAACTTCTTTGAAA 57.400 26.923 10.28 0.00 38.73 2.69
708 735 2.060326 TCCATGACGACGTCTTTGTC 57.940 50.000 26.86 13.86 38.96 3.18
709 736 2.743636 ATCCATGACGACGTCTTTGT 57.256 45.000 26.86 3.92 33.15 2.83
710 737 3.060272 GCATATCCATGACGACGTCTTTG 60.060 47.826 26.86 22.17 33.67 2.77
711 738 3.123804 GCATATCCATGACGACGTCTTT 58.876 45.455 26.86 13.03 33.67 2.52
712 739 2.545952 GGCATATCCATGACGACGTCTT 60.546 50.000 26.86 18.87 33.67 3.01
713 740 1.000163 GGCATATCCATGACGACGTCT 60.000 52.381 26.86 10.41 33.67 4.18
714 741 1.269569 TGGCATATCCATGACGACGTC 60.270 52.381 20.97 20.97 43.89 4.34
715 742 0.750249 TGGCATATCCATGACGACGT 59.250 50.000 0.00 0.00 43.89 4.34
716 743 1.422388 CTGGCATATCCATGACGACG 58.578 55.000 0.00 0.00 43.89 5.12
717 744 1.609061 CCCTGGCATATCCATGACGAC 60.609 57.143 0.00 0.00 43.89 4.34
718 745 0.686789 CCCTGGCATATCCATGACGA 59.313 55.000 0.00 0.00 43.89 4.20
719 746 0.686789 TCCCTGGCATATCCATGACG 59.313 55.000 0.00 0.00 43.89 4.35
720 747 1.421268 TGTCCCTGGCATATCCATGAC 59.579 52.381 0.00 12.25 45.50 3.06
721 748 1.818419 TGTCCCTGGCATATCCATGA 58.182 50.000 0.00 0.00 45.50 3.07
722 749 2.662535 TTGTCCCTGGCATATCCATG 57.337 50.000 0.00 0.00 45.50 3.66
723 750 2.448194 ACATTGTCCCTGGCATATCCAT 59.552 45.455 0.00 0.00 45.50 3.41
724 751 1.852309 ACATTGTCCCTGGCATATCCA 59.148 47.619 0.00 0.00 44.18 3.41
725 752 2.107204 AGACATTGTCCCTGGCATATCC 59.893 50.000 13.14 0.00 32.18 2.59
726 753 3.498774 AGACATTGTCCCTGGCATATC 57.501 47.619 13.14 0.00 32.18 1.63
727 754 3.053395 ACAAGACATTGTCCCTGGCATAT 60.053 43.478 13.14 0.00 46.90 1.78
728 755 2.308570 ACAAGACATTGTCCCTGGCATA 59.691 45.455 13.14 0.00 46.90 3.14
729 756 1.076024 ACAAGACATTGTCCCTGGCAT 59.924 47.619 13.14 0.00 46.90 4.40
730 757 0.478072 ACAAGACATTGTCCCTGGCA 59.522 50.000 13.14 0.00 46.90 4.92
731 758 2.084546 GTACAAGACATTGTCCCTGGC 58.915 52.381 13.14 5.65 46.90 4.85
732 759 2.028476 TCGTACAAGACATTGTCCCTGG 60.028 50.000 13.14 3.55 46.90 4.45
733 760 2.993899 GTCGTACAAGACATTGTCCCTG 59.006 50.000 13.14 12.84 46.90 4.45
734 761 2.631062 TGTCGTACAAGACATTGTCCCT 59.369 45.455 13.14 0.00 46.90 4.20
735 762 3.034721 TGTCGTACAAGACATTGTCCC 57.965 47.619 13.14 0.00 46.90 4.46
746 773 9.715121 AAGGAATTAGTATTTCTTGTCGTACAA 57.285 29.630 5.11 0.00 38.02 2.41
747 774 9.362539 GAAGGAATTAGTATTTCTTGTCGTACA 57.637 33.333 0.00 0.00 39.26 2.90
748 775 8.815189 GGAAGGAATTAGTATTTCTTGTCGTAC 58.185 37.037 0.00 0.00 39.26 3.67
749 776 7.703621 CGGAAGGAATTAGTATTTCTTGTCGTA 59.296 37.037 0.00 0.00 39.26 3.43
750 777 6.534079 CGGAAGGAATTAGTATTTCTTGTCGT 59.466 38.462 0.00 0.00 39.26 4.34
751 778 6.934210 CGGAAGGAATTAGTATTTCTTGTCG 58.066 40.000 0.00 0.00 39.26 4.35
770 797 0.323629 TCCAAGTTACCAGCCGGAAG 59.676 55.000 5.05 0.00 35.59 3.46
771 798 0.766131 TTCCAAGTTACCAGCCGGAA 59.234 50.000 5.05 0.00 35.59 4.30
772 799 0.766131 TTTCCAAGTTACCAGCCGGA 59.234 50.000 5.05 0.00 35.59 5.14
773 800 1.611519 TTTTCCAAGTTACCAGCCGG 58.388 50.000 0.00 0.00 38.77 6.13
805 832 4.805231 TGTATCGTGCACCGGCCG 62.805 66.667 21.04 21.04 40.13 6.13
806 833 2.435234 TTGTATCGTGCACCGGCC 60.435 61.111 12.15 0.00 40.13 6.13
807 834 2.461110 CCTTGTATCGTGCACCGGC 61.461 63.158 12.15 0.00 41.68 6.13
808 835 1.813753 CCCTTGTATCGTGCACCGG 60.814 63.158 12.15 0.00 37.11 5.28
809 836 0.390603 TTCCCTTGTATCGTGCACCG 60.391 55.000 12.15 6.81 38.13 4.94
810 837 1.369625 CTTCCCTTGTATCGTGCACC 58.630 55.000 12.15 0.00 0.00 5.01
811 838 1.369625 CCTTCCCTTGTATCGTGCAC 58.630 55.000 6.82 6.82 0.00 4.57
812 839 0.392461 GCCTTCCCTTGTATCGTGCA 60.392 55.000 0.00 0.00 0.00 4.57
813 840 1.095807 GGCCTTCCCTTGTATCGTGC 61.096 60.000 0.00 0.00 0.00 5.34
814 841 0.810031 CGGCCTTCCCTTGTATCGTG 60.810 60.000 0.00 0.00 0.00 4.35
815 842 1.262640 ACGGCCTTCCCTTGTATCGT 61.263 55.000 0.00 0.00 0.00 3.73
816 843 0.529992 GACGGCCTTCCCTTGTATCG 60.530 60.000 0.00 0.00 0.00 2.92
817 844 0.179054 GGACGGCCTTCCCTTGTATC 60.179 60.000 17.62 0.00 0.00 2.24
818 845 1.912971 GGACGGCCTTCCCTTGTAT 59.087 57.895 17.62 0.00 0.00 2.29
819 846 3.395630 GGACGGCCTTCCCTTGTA 58.604 61.111 17.62 0.00 0.00 2.41
825 852 2.708593 AAACCAAGGGACGGCCTTCC 62.709 60.000 20.08 20.08 34.52 3.46
826 853 0.037160 TAAACCAAGGGACGGCCTTC 59.963 55.000 7.57 0.00 0.00 3.46
827 854 0.479378 TTAAACCAAGGGACGGCCTT 59.521 50.000 7.57 0.00 0.00 4.35
828 855 0.702316 ATTAAACCAAGGGACGGCCT 59.298 50.000 7.57 0.00 0.00 5.19
829 856 1.552578 AATTAAACCAAGGGACGGCC 58.447 50.000 0.00 0.00 0.00 6.13
830 857 2.686405 CCTAATTAAACCAAGGGACGGC 59.314 50.000 0.00 0.00 0.00 5.68
831 858 3.692593 CACCTAATTAAACCAAGGGACGG 59.307 47.826 0.00 0.00 33.16 4.79
832 859 4.329392 ACACCTAATTAAACCAAGGGACG 58.671 43.478 0.00 0.00 33.16 4.79
833 860 5.184479 GGAACACCTAATTAAACCAAGGGAC 59.816 44.000 0.00 0.00 33.16 4.46
834 861 5.162969 TGGAACACCTAATTAAACCAAGGGA 60.163 40.000 0.00 0.00 33.16 4.20
835 862 5.081032 TGGAACACCTAATTAAACCAAGGG 58.919 41.667 0.00 0.00 33.16 3.95
836 863 5.336451 GCTGGAACACCTAATTAAACCAAGG 60.336 44.000 0.00 0.00 35.14 3.61
837 864 5.476945 AGCTGGAACACCTAATTAAACCAAG 59.523 40.000 0.00 0.00 0.00 3.61
838 865 5.390387 AGCTGGAACACCTAATTAAACCAA 58.610 37.500 0.00 0.00 0.00 3.67
839 866 4.993028 AGCTGGAACACCTAATTAAACCA 58.007 39.130 0.00 0.00 0.00 3.67
840 867 5.066117 GCTAGCTGGAACACCTAATTAAACC 59.934 44.000 7.70 0.00 0.00 3.27
841 868 5.066117 GGCTAGCTGGAACACCTAATTAAAC 59.934 44.000 15.72 0.00 0.00 2.01
842 869 5.045140 AGGCTAGCTGGAACACCTAATTAAA 60.045 40.000 15.72 0.00 27.45 1.52
843 870 4.473559 AGGCTAGCTGGAACACCTAATTAA 59.526 41.667 15.72 0.00 27.45 1.40
844 871 4.037927 AGGCTAGCTGGAACACCTAATTA 58.962 43.478 15.72 0.00 27.45 1.40
845 872 2.846827 AGGCTAGCTGGAACACCTAATT 59.153 45.455 15.72 0.00 27.45 1.40
846 873 2.171448 CAGGCTAGCTGGAACACCTAAT 59.829 50.000 15.72 0.00 28.29 1.73
847 874 1.555075 CAGGCTAGCTGGAACACCTAA 59.445 52.381 15.72 0.00 28.29 2.69
848 875 1.195115 CAGGCTAGCTGGAACACCTA 58.805 55.000 15.72 0.00 28.29 3.08
849 876 1.557269 CCAGGCTAGCTGGAACACCT 61.557 60.000 21.82 4.05 44.39 4.00
850 877 1.078143 CCAGGCTAGCTGGAACACC 60.078 63.158 21.82 1.85 44.39 4.16
851 878 1.078143 CCCAGGCTAGCTGGAACAC 60.078 63.158 25.76 5.90 44.39 3.32
852 879 0.252513 TACCCAGGCTAGCTGGAACA 60.253 55.000 25.76 12.81 44.39 3.18
853 880 0.178301 GTACCCAGGCTAGCTGGAAC 59.822 60.000 25.76 20.21 44.39 3.62
854 881 1.327690 CGTACCCAGGCTAGCTGGAA 61.328 60.000 25.76 15.13 44.39 3.53
855 882 1.756950 CGTACCCAGGCTAGCTGGA 60.757 63.158 25.76 10.97 44.39 3.86
856 883 0.754217 TACGTACCCAGGCTAGCTGG 60.754 60.000 20.25 20.25 41.45 4.85
857 884 0.384669 GTACGTACCCAGGCTAGCTG 59.615 60.000 15.00 10.64 0.00 4.24
858 885 1.099879 CGTACGTACCCAGGCTAGCT 61.100 60.000 19.67 0.00 0.00 3.32
859 886 1.358046 CGTACGTACCCAGGCTAGC 59.642 63.158 19.67 6.04 0.00 3.42
860 887 0.379669 CACGTACGTACCCAGGCTAG 59.620 60.000 22.34 5.85 0.00 3.42
861 888 0.322456 ACACGTACGTACCCAGGCTA 60.322 55.000 22.34 0.00 0.00 3.93
862 889 0.322456 TACACGTACGTACCCAGGCT 60.322 55.000 22.34 1.65 0.00 4.58
863 890 0.179163 GTACACGTACGTACCCAGGC 60.179 60.000 22.34 3.76 36.54 4.85
864 891 3.996825 GTACACGTACGTACCCAGG 57.003 57.895 22.34 10.15 36.54 4.45
876 903 0.599204 AGAGGCCAACAACGTACACG 60.599 55.000 5.01 0.00 46.33 4.49
877 904 0.865769 CAGAGGCCAACAACGTACAC 59.134 55.000 5.01 0.00 0.00 2.90
878 905 0.466543 ACAGAGGCCAACAACGTACA 59.533 50.000 5.01 0.00 0.00 2.90
879 906 2.064014 GTACAGAGGCCAACAACGTAC 58.936 52.381 5.01 8.26 0.00 3.67
880 907 1.965643 AGTACAGAGGCCAACAACGTA 59.034 47.619 5.01 0.00 0.00 3.57
881 908 0.756903 AGTACAGAGGCCAACAACGT 59.243 50.000 5.01 0.50 0.00 3.99
882 909 1.148310 CAGTACAGAGGCCAACAACG 58.852 55.000 5.01 0.00 0.00 4.10
883 910 2.256117 ACAGTACAGAGGCCAACAAC 57.744 50.000 5.01 0.00 0.00 3.32
884 911 5.748670 TTATACAGTACAGAGGCCAACAA 57.251 39.130 5.01 0.00 0.00 2.83
885 912 5.451381 CGATTATACAGTACAGAGGCCAACA 60.451 44.000 5.01 0.00 0.00 3.33
886 913 4.982916 CGATTATACAGTACAGAGGCCAAC 59.017 45.833 5.01 0.00 0.00 3.77
887 914 4.891168 TCGATTATACAGTACAGAGGCCAA 59.109 41.667 5.01 0.00 0.00 4.52
888 915 4.466827 TCGATTATACAGTACAGAGGCCA 58.533 43.478 5.01 0.00 0.00 5.36
889 916 5.416326 AGATCGATTATACAGTACAGAGGCC 59.584 44.000 0.00 0.00 0.00 5.19
890 917 6.318628 CAGATCGATTATACAGTACAGAGGC 58.681 44.000 0.00 0.00 0.00 4.70
891 918 6.318628 GCAGATCGATTATACAGTACAGAGG 58.681 44.000 0.00 0.00 0.00 3.69
892 919 6.150307 AGGCAGATCGATTATACAGTACAGAG 59.850 42.308 0.00 0.00 0.00 3.35
893 920 6.004574 AGGCAGATCGATTATACAGTACAGA 58.995 40.000 0.00 0.00 0.00 3.41
894 921 6.260870 AGGCAGATCGATTATACAGTACAG 57.739 41.667 0.00 0.00 0.00 2.74
895 922 5.106673 CGAGGCAGATCGATTATACAGTACA 60.107 44.000 0.00 0.00 45.56 2.90
896 923 5.121925 TCGAGGCAGATCGATTATACAGTAC 59.878 44.000 0.00 0.00 46.20 2.73
897 924 5.243207 TCGAGGCAGATCGATTATACAGTA 58.757 41.667 0.00 0.00 46.20 2.74
898 925 4.072839 TCGAGGCAGATCGATTATACAGT 58.927 43.478 0.00 0.00 46.20 3.55
899 926 4.686839 TCGAGGCAGATCGATTATACAG 57.313 45.455 0.00 0.00 46.20 2.74
908 935 1.278337 CGAGAGTCGAGGCAGATCG 59.722 63.158 0.00 0.00 43.74 3.69
909 936 1.652012 CCGAGAGTCGAGGCAGATC 59.348 63.158 0.00 0.00 43.74 2.75
910 937 3.834726 CCGAGAGTCGAGGCAGAT 58.165 61.111 0.00 0.00 43.74 2.90
914 941 4.539881 GACGCCGAGAGTCGAGGC 62.540 72.222 18.25 18.25 43.74 4.70
942 969 3.691744 GAGTCTCCTCGTGCCGCAG 62.692 68.421 0.00 0.00 0.00 5.18
959 986 4.193334 CGGATGCTCTCGTGGCGA 62.193 66.667 0.00 0.00 0.00 5.54
963 990 3.490793 ATCGGCGGATGCTCTCGTG 62.491 63.158 7.21 0.00 42.25 4.35
964 991 3.200887 GATCGGCGGATGCTCTCGT 62.201 63.158 12.00 0.00 42.25 4.18
965 992 2.429907 GATCGGCGGATGCTCTCG 60.430 66.667 12.00 0.00 42.25 4.04
966 993 2.429907 CGATCGGCGGATGCTCTC 60.430 66.667 12.00 0.00 42.25 3.20
967 994 2.907407 TCGATCGGCGGATGCTCT 60.907 61.111 16.41 0.00 42.25 4.09
973 1000 1.153901 GTCTTTGTCGATCGGCGGA 60.154 57.895 15.94 10.25 41.33 5.54
995 1022 1.374252 GTCGTCGGTGCCATTGTCT 60.374 57.895 0.00 0.00 0.00 3.41
1081 1108 2.815211 GCTCATGTTGCGCTCCGA 60.815 61.111 9.73 0.00 0.00 4.55
1104 1140 4.592192 CCGCCATCCGCATCGTCT 62.592 66.667 0.00 0.00 37.30 4.18
1305 1347 4.722700 ACCCATGGCTGCGACACC 62.723 66.667 6.09 0.00 0.00 4.16
1467 1509 2.032634 GCGGTTGATCTTGGCGACA 61.033 57.895 0.00 0.00 39.83 4.35
1493 1535 2.109126 GGCTGCTCATCCAACGGTC 61.109 63.158 0.00 0.00 0.00 4.79
1499 1541 0.760567 ATACTCCGGCTGCTCATCCA 60.761 55.000 0.00 0.00 0.00 3.41
1500 1542 1.257743 TATACTCCGGCTGCTCATCC 58.742 55.000 0.00 0.00 0.00 3.51
1520 1562 0.395312 CCCTGGGTTGACACTAACGT 59.605 55.000 3.97 0.00 0.00 3.99
1539 1581 1.568025 GACAAAAGCACGGTCGACC 59.432 57.895 25.28 25.28 0.00 4.79
1581 1623 2.502130 TCCACACACTACAAAGTCCACA 59.498 45.455 0.00 0.00 31.97 4.17
1582 1624 3.188159 TCCACACACTACAAAGTCCAC 57.812 47.619 0.00 0.00 31.97 4.02
1583 1625 3.389656 TCATCCACACACTACAAAGTCCA 59.610 43.478 0.00 0.00 31.97 4.02
1584 1626 4.002906 TCATCCACACACTACAAAGTCC 57.997 45.455 0.00 0.00 31.97 3.85
1585 1627 5.106555 CCAATCATCCACACACTACAAAGTC 60.107 44.000 0.00 0.00 31.97 3.01
1586 1628 4.761739 CCAATCATCCACACACTACAAAGT 59.238 41.667 0.00 0.00 35.91 2.66
1587 1629 4.761739 ACCAATCATCCACACACTACAAAG 59.238 41.667 0.00 0.00 0.00 2.77
1588 1630 4.518590 CACCAATCATCCACACACTACAAA 59.481 41.667 0.00 0.00 0.00 2.83
1589 1631 4.071423 CACCAATCATCCACACACTACAA 58.929 43.478 0.00 0.00 0.00 2.41
1590 1632 3.558958 CCACCAATCATCCACACACTACA 60.559 47.826 0.00 0.00 0.00 2.74
1591 1633 3.009723 CCACCAATCATCCACACACTAC 58.990 50.000 0.00 0.00 0.00 2.73
1592 1634 2.617788 GCCACCAATCATCCACACACTA 60.618 50.000 0.00 0.00 0.00 2.74
1593 1635 1.887956 GCCACCAATCATCCACACACT 60.888 52.381 0.00 0.00 0.00 3.55
1594 1636 0.527565 GCCACCAATCATCCACACAC 59.472 55.000 0.00 0.00 0.00 3.82
1595 1637 0.112025 TGCCACCAATCATCCACACA 59.888 50.000 0.00 0.00 0.00 3.72
1596 1638 0.813184 CTGCCACCAATCATCCACAC 59.187 55.000 0.00 0.00 0.00 3.82
1597 1639 0.405198 ACTGCCACCAATCATCCACA 59.595 50.000 0.00 0.00 0.00 4.17
1598 1640 0.813184 CACTGCCACCAATCATCCAC 59.187 55.000 0.00 0.00 0.00 4.02
1599 1641 0.323633 CCACTGCCACCAATCATCCA 60.324 55.000 0.00 0.00 0.00 3.41
1600 1642 0.323725 ACCACTGCCACCAATCATCC 60.324 55.000 0.00 0.00 0.00 3.51
1601 1643 1.549203 AACCACTGCCACCAATCATC 58.451 50.000 0.00 0.00 0.00 2.92
1602 1644 1.895131 GAAACCACTGCCACCAATCAT 59.105 47.619 0.00 0.00 0.00 2.45
1603 1645 1.327303 GAAACCACTGCCACCAATCA 58.673 50.000 0.00 0.00 0.00 2.57
1604 1646 1.327303 TGAAACCACTGCCACCAATC 58.673 50.000 0.00 0.00 0.00 2.67
1605 1647 1.688197 CTTGAAACCACTGCCACCAAT 59.312 47.619 0.00 0.00 0.00 3.16
1606 1648 1.110442 CTTGAAACCACTGCCACCAA 58.890 50.000 0.00 0.00 0.00 3.67
1607 1649 1.391157 GCTTGAAACCACTGCCACCA 61.391 55.000 0.00 0.00 0.00 4.17
1608 1650 1.363807 GCTTGAAACCACTGCCACC 59.636 57.895 0.00 0.00 0.00 4.61
1609 1651 1.363807 GGCTTGAAACCACTGCCAC 59.636 57.895 0.00 0.00 42.79 5.01
1610 1652 1.832167 GGGCTTGAAACCACTGCCA 60.832 57.895 0.00 0.00 44.85 4.92
1611 1653 0.251165 TAGGGCTTGAAACCACTGCC 60.251 55.000 0.00 0.00 42.56 4.85
1612 1654 1.168714 CTAGGGCTTGAAACCACTGC 58.831 55.000 0.00 0.00 0.00 4.40
1613 1655 2.568623 ACTAGGGCTTGAAACCACTG 57.431 50.000 0.00 0.00 0.00 3.66
1614 1656 3.595190 AAACTAGGGCTTGAAACCACT 57.405 42.857 0.00 0.00 0.00 4.00
1615 1657 3.798889 GCAAAACTAGGGCTTGAAACCAC 60.799 47.826 0.00 0.00 0.00 4.16
1616 1658 2.364002 GCAAAACTAGGGCTTGAAACCA 59.636 45.455 0.00 0.00 0.00 3.67
1617 1659 2.364002 TGCAAAACTAGGGCTTGAAACC 59.636 45.455 0.00 0.00 0.00 3.27
1618 1660 3.726291 TGCAAAACTAGGGCTTGAAAC 57.274 42.857 0.00 0.00 0.00 2.78
1619 1661 3.640967 ACATGCAAAACTAGGGCTTGAAA 59.359 39.130 15.56 2.06 36.52 2.69
1620 1662 3.005684 CACATGCAAAACTAGGGCTTGAA 59.994 43.478 15.56 3.39 36.52 2.69
1621 1663 2.557924 CACATGCAAAACTAGGGCTTGA 59.442 45.455 15.56 0.92 36.52 3.02
1622 1664 2.557924 TCACATGCAAAACTAGGGCTTG 59.442 45.455 0.00 3.84 38.30 4.01
1623 1665 2.558359 GTCACATGCAAAACTAGGGCTT 59.442 45.455 0.00 0.00 0.00 4.35
1624 1666 2.162681 GTCACATGCAAAACTAGGGCT 58.837 47.619 0.00 0.00 0.00 5.19
1625 1667 1.135689 CGTCACATGCAAAACTAGGGC 60.136 52.381 0.00 0.00 0.00 5.19
1626 1668 1.468520 CCGTCACATGCAAAACTAGGG 59.531 52.381 0.00 0.00 0.00 3.53
1627 1669 2.095768 CACCGTCACATGCAAAACTAGG 60.096 50.000 0.00 0.00 0.00 3.02
1628 1670 2.805671 TCACCGTCACATGCAAAACTAG 59.194 45.455 0.00 0.00 0.00 2.57
1629 1671 2.805671 CTCACCGTCACATGCAAAACTA 59.194 45.455 0.00 0.00 0.00 2.24
1630 1672 1.603802 CTCACCGTCACATGCAAAACT 59.396 47.619 0.00 0.00 0.00 2.66
1631 1673 1.333619 ACTCACCGTCACATGCAAAAC 59.666 47.619 0.00 0.00 0.00 2.43
1632 1674 1.601903 GACTCACCGTCACATGCAAAA 59.398 47.619 0.00 0.00 42.37 2.44
1633 1675 1.225855 GACTCACCGTCACATGCAAA 58.774 50.000 0.00 0.00 42.37 3.68
1634 1676 2.912986 GACTCACCGTCACATGCAA 58.087 52.632 0.00 0.00 42.37 4.08
1635 1677 4.673403 GACTCACCGTCACATGCA 57.327 55.556 0.00 0.00 42.37 3.96
1642 1684 0.959553 TTGAGGTCTGACTCACCGTC 59.040 55.000 7.85 0.00 46.44 4.79
1643 1685 1.546476 GATTGAGGTCTGACTCACCGT 59.454 52.381 7.85 0.00 46.44 4.83
1644 1686 1.821753 AGATTGAGGTCTGACTCACCG 59.178 52.381 7.85 0.00 46.44 4.94
1645 1687 4.020543 ACTAGATTGAGGTCTGACTCACC 58.979 47.826 7.85 4.81 46.44 4.02
1646 1688 5.652994 AACTAGATTGAGGTCTGACTCAC 57.347 43.478 7.85 0.75 46.44 3.51
1647 1689 5.540337 ACAAACTAGATTGAGGTCTGACTCA 59.460 40.000 18.57 6.78 45.22 3.41
1648 1690 5.866633 CACAAACTAGATTGAGGTCTGACTC 59.133 44.000 18.57 4.30 37.99 3.36
1649 1691 5.305644 ACACAAACTAGATTGAGGTCTGACT 59.694 40.000 18.57 0.00 34.38 3.41
1650 1692 5.406780 CACACAAACTAGATTGAGGTCTGAC 59.593 44.000 18.57 0.00 34.38 3.51
1651 1693 5.304357 TCACACAAACTAGATTGAGGTCTGA 59.696 40.000 18.57 8.36 34.38 3.27
1652 1694 5.406780 GTCACACAAACTAGATTGAGGTCTG 59.593 44.000 18.57 8.80 34.38 3.51
1653 1695 5.305644 AGTCACACAAACTAGATTGAGGTCT 59.694 40.000 18.57 8.38 34.38 3.85
1654 1696 5.406780 CAGTCACACAAACTAGATTGAGGTC 59.593 44.000 18.57 6.58 34.38 3.85
1655 1697 5.163301 ACAGTCACACAAACTAGATTGAGGT 60.163 40.000 18.57 12.74 34.38 3.85
1656 1698 5.300752 ACAGTCACACAAACTAGATTGAGG 58.699 41.667 18.57 12.19 34.38 3.86
1657 1699 5.117745 CGACAGTCACACAAACTAGATTGAG 59.882 44.000 18.57 13.23 34.38 3.02
1658 1700 4.982295 CGACAGTCACACAAACTAGATTGA 59.018 41.667 18.57 0.00 34.38 2.57
1659 1701 4.150627 CCGACAGTCACACAAACTAGATTG 59.849 45.833 10.91 10.91 36.37 2.67
1660 1702 4.307432 CCGACAGTCACACAAACTAGATT 58.693 43.478 0.00 0.00 0.00 2.40
1661 1703 3.861131 GCCGACAGTCACACAAACTAGAT 60.861 47.826 0.00 0.00 0.00 1.98
1662 1704 2.545113 GCCGACAGTCACACAAACTAGA 60.545 50.000 0.00 0.00 0.00 2.43
1663 1705 1.792949 GCCGACAGTCACACAAACTAG 59.207 52.381 0.41 0.00 0.00 2.57
1664 1706 1.137282 TGCCGACAGTCACACAAACTA 59.863 47.619 0.41 0.00 0.00 2.24
1665 1707 0.107897 TGCCGACAGTCACACAAACT 60.108 50.000 0.41 0.00 0.00 2.66
1666 1708 0.304705 CTGCCGACAGTCACACAAAC 59.695 55.000 0.41 0.00 39.22 2.93
1667 1709 2.689083 CTGCCGACAGTCACACAAA 58.311 52.632 0.41 0.00 39.22 2.83
1668 1710 4.436515 CTGCCGACAGTCACACAA 57.563 55.556 0.41 0.00 39.22 3.33
1677 1719 0.904865 AATGAGGGAGACTGCCGACA 60.905 55.000 15.29 15.29 30.73 4.35
1678 1720 0.250513 AAATGAGGGAGACTGCCGAC 59.749 55.000 7.44 6.81 30.73 4.79
1679 1721 0.984230 AAAATGAGGGAGACTGCCGA 59.016 50.000 7.44 0.00 30.73 5.54
1680 1722 1.089920 CAAAATGAGGGAGACTGCCG 58.910 55.000 7.44 0.00 30.73 5.69
1681 1723 1.272147 ACCAAAATGAGGGAGACTGCC 60.272 52.381 4.51 4.51 0.00 4.85
1682 1724 1.815003 CACCAAAATGAGGGAGACTGC 59.185 52.381 0.00 0.00 0.00 4.40
1683 1725 1.815003 GCACCAAAATGAGGGAGACTG 59.185 52.381 0.00 0.00 0.00 3.51
1684 1726 1.707427 AGCACCAAAATGAGGGAGACT 59.293 47.619 0.00 0.00 0.00 3.24
1685 1727 2.087646 GAGCACCAAAATGAGGGAGAC 58.912 52.381 0.00 0.00 0.00 3.36
1686 1728 1.339055 CGAGCACCAAAATGAGGGAGA 60.339 52.381 0.00 0.00 0.00 3.71
1687 1729 1.089920 CGAGCACCAAAATGAGGGAG 58.910 55.000 0.00 0.00 0.00 4.30
1688 1730 0.690192 TCGAGCACCAAAATGAGGGA 59.310 50.000 0.00 0.00 0.00 4.20
1689 1731 1.089920 CTCGAGCACCAAAATGAGGG 58.910 55.000 0.00 0.00 0.00 4.30
1690 1732 1.089920 CCTCGAGCACCAAAATGAGG 58.910 55.000 6.99 0.00 37.29 3.86
1691 1733 1.734465 GACCTCGAGCACCAAAATGAG 59.266 52.381 6.99 0.00 0.00 2.90
1692 1734 1.347707 AGACCTCGAGCACCAAAATGA 59.652 47.619 6.99 0.00 0.00 2.57
1693 1735 1.734465 GAGACCTCGAGCACCAAAATG 59.266 52.381 6.99 0.00 0.00 2.32
1694 1736 1.339151 GGAGACCTCGAGCACCAAAAT 60.339 52.381 6.99 0.00 0.00 1.82
1695 1737 0.034896 GGAGACCTCGAGCACCAAAA 59.965 55.000 6.99 0.00 0.00 2.44
1696 1738 1.118965 TGGAGACCTCGAGCACCAAA 61.119 55.000 6.99 0.00 0.00 3.28
1697 1739 1.118965 TTGGAGACCTCGAGCACCAA 61.119 55.000 19.18 19.18 35.48 3.67
1698 1740 1.533033 TTGGAGACCTCGAGCACCA 60.533 57.895 6.99 10.13 0.00 4.17
1699 1741 1.079750 GTTGGAGACCTCGAGCACC 60.080 63.158 6.99 7.61 0.00 5.01
1700 1742 1.079750 GGTTGGAGACCTCGAGCAC 60.080 63.158 6.99 2.80 45.55 4.40
1701 1743 3.377656 GGTTGGAGACCTCGAGCA 58.622 61.111 6.99 0.00 45.55 4.26
1709 1751 1.079057 GGCTTCCGAGGTTGGAGAC 60.079 63.158 0.00 0.00 39.72 3.36
1710 1752 1.229209 AGGCTTCCGAGGTTGGAGA 60.229 57.895 0.00 0.00 39.72 3.71
1711 1753 1.078848 CAGGCTTCCGAGGTTGGAG 60.079 63.158 0.00 0.00 39.72 3.86
1712 1754 1.841556 ACAGGCTTCCGAGGTTGGA 60.842 57.895 0.00 0.00 35.83 3.53
1713 1755 1.672356 CACAGGCTTCCGAGGTTGG 60.672 63.158 0.00 0.00 0.00 3.77
1714 1756 0.250295 TTCACAGGCTTCCGAGGTTG 60.250 55.000 0.00 0.00 0.00 3.77
1715 1757 0.693049 ATTCACAGGCTTCCGAGGTT 59.307 50.000 0.00 0.00 0.00 3.50
1716 1758 0.250513 GATTCACAGGCTTCCGAGGT 59.749 55.000 0.00 0.00 0.00 3.85
1717 1759 0.539051 AGATTCACAGGCTTCCGAGG 59.461 55.000 0.00 0.00 0.00 4.63
1718 1760 2.801342 GCTAGATTCACAGGCTTCCGAG 60.801 54.545 0.00 0.00 0.00 4.63
1719 1761 1.137086 GCTAGATTCACAGGCTTCCGA 59.863 52.381 0.00 0.00 0.00 4.55
1720 1762 1.576356 GCTAGATTCACAGGCTTCCG 58.424 55.000 0.00 0.00 0.00 4.30
1721 1763 1.475930 GGGCTAGATTCACAGGCTTCC 60.476 57.143 0.00 0.00 37.49 3.46
1722 1764 1.210478 TGGGCTAGATTCACAGGCTTC 59.790 52.381 0.00 0.00 37.49 3.86
1723 1765 1.065126 GTGGGCTAGATTCACAGGCTT 60.065 52.381 0.00 0.00 37.49 4.35
1724 1766 0.543749 GTGGGCTAGATTCACAGGCT 59.456 55.000 0.00 0.00 37.49 4.58
1725 1767 0.253044 TGTGGGCTAGATTCACAGGC 59.747 55.000 0.00 3.98 36.61 4.85
1726 1768 1.278985 TGTGTGGGCTAGATTCACAGG 59.721 52.381 11.67 0.00 41.33 4.00
1727 1769 2.768253 TGTGTGGGCTAGATTCACAG 57.232 50.000 11.67 0.00 41.33 3.66
1728 1770 2.940971 GCATGTGTGGGCTAGATTCACA 60.941 50.000 0.00 1.38 41.93 3.58
1729 1771 1.672881 GCATGTGTGGGCTAGATTCAC 59.327 52.381 0.00 0.00 0.00 3.18
1730 1772 1.281577 TGCATGTGTGGGCTAGATTCA 59.718 47.619 0.00 0.00 0.00 2.57
1731 1773 1.672881 GTGCATGTGTGGGCTAGATTC 59.327 52.381 0.00 0.00 0.00 2.52
1732 1774 1.755179 GTGCATGTGTGGGCTAGATT 58.245 50.000 0.00 0.00 0.00 2.40
1733 1775 0.462581 CGTGCATGTGTGGGCTAGAT 60.463 55.000 0.00 0.00 0.00 1.98
1734 1776 1.079197 CGTGCATGTGTGGGCTAGA 60.079 57.895 0.00 0.00 0.00 2.43
1735 1777 1.375908 ACGTGCATGTGTGGGCTAG 60.376 57.895 11.65 0.00 0.00 3.42
1736 1778 1.670730 CACGTGCATGTGTGGGCTA 60.671 57.895 27.52 0.00 35.12 3.93
1737 1779 2.979676 CACGTGCATGTGTGGGCT 60.980 61.111 27.52 0.00 35.12 5.19
1741 1783 3.364441 CCCCCACGTGCATGTGTG 61.364 66.667 31.61 23.45 38.20 3.82
1752 1794 3.670377 GAAGTGTTGCGCCCCCAC 61.670 66.667 4.18 9.10 0.00 4.61
1753 1795 4.966787 GGAAGTGTTGCGCCCCCA 62.967 66.667 4.18 0.00 0.00 4.96
1766 1808 2.086869 ACATCTCATTGCCAACGGAAG 58.913 47.619 0.00 0.00 0.00 3.46
1767 1809 1.811965 CACATCTCATTGCCAACGGAA 59.188 47.619 0.00 0.00 0.00 4.30
1768 1810 1.271325 ACACATCTCATTGCCAACGGA 60.271 47.619 0.00 0.00 0.00 4.69
1769 1811 1.167851 ACACATCTCATTGCCAACGG 58.832 50.000 0.00 0.00 0.00 4.44
1770 1812 2.226200 TCAACACATCTCATTGCCAACG 59.774 45.455 0.00 0.00 0.00 4.10
1771 1813 3.921119 TCAACACATCTCATTGCCAAC 57.079 42.857 0.00 0.00 0.00 3.77
1772 1814 4.338012 AGATCAACACATCTCATTGCCAA 58.662 39.130 0.00 0.00 0.00 4.52
1773 1815 3.959293 AGATCAACACATCTCATTGCCA 58.041 40.909 0.00 0.00 0.00 4.92
1774 1816 4.024218 GCTAGATCAACACATCTCATTGCC 60.024 45.833 0.00 0.00 34.75 4.52
1775 1817 4.573607 TGCTAGATCAACACATCTCATTGC 59.426 41.667 0.00 0.00 34.75 3.56
1776 1818 6.482308 TCATGCTAGATCAACACATCTCATTG 59.518 38.462 0.00 0.00 34.75 2.82
1777 1819 6.589135 TCATGCTAGATCAACACATCTCATT 58.411 36.000 0.00 0.00 34.75 2.57
1778 1820 6.170846 TCATGCTAGATCAACACATCTCAT 57.829 37.500 0.00 0.00 34.75 2.90
1779 1821 5.603170 TCATGCTAGATCAACACATCTCA 57.397 39.130 0.00 0.00 34.75 3.27
1780 1822 5.408909 CCATCATGCTAGATCAACACATCTC 59.591 44.000 0.00 0.00 34.75 2.75
1781 1823 5.163227 ACCATCATGCTAGATCAACACATCT 60.163 40.000 0.00 0.00 36.97 2.90
1782 1824 5.061853 ACCATCATGCTAGATCAACACATC 58.938 41.667 0.00 0.00 0.00 3.06
1783 1825 5.045012 ACCATCATGCTAGATCAACACAT 57.955 39.130 0.00 0.00 0.00 3.21
1784 1826 4.492494 ACCATCATGCTAGATCAACACA 57.508 40.909 0.00 0.00 0.00 3.72
1785 1827 6.462500 AGATACCATCATGCTAGATCAACAC 58.538 40.000 0.00 0.00 0.00 3.32
1786 1828 6.676990 AGATACCATCATGCTAGATCAACA 57.323 37.500 0.00 0.00 0.00 3.33
1787 1829 7.443575 ACAAAGATACCATCATGCTAGATCAAC 59.556 37.037 0.00 0.00 0.00 3.18
1788 1830 7.443272 CACAAAGATACCATCATGCTAGATCAA 59.557 37.037 0.00 0.00 0.00 2.57
1789 1831 6.932960 CACAAAGATACCATCATGCTAGATCA 59.067 38.462 0.00 0.00 0.00 2.92
1790 1832 6.370994 CCACAAAGATACCATCATGCTAGATC 59.629 42.308 0.00 0.00 0.00 2.75
1791 1833 6.236409 CCACAAAGATACCATCATGCTAGAT 58.764 40.000 0.00 0.00 0.00 1.98
1792 1834 5.614308 CCACAAAGATACCATCATGCTAGA 58.386 41.667 0.00 0.00 0.00 2.43
1793 1835 4.214971 GCCACAAAGATACCATCATGCTAG 59.785 45.833 0.00 0.00 0.00 3.42
1794 1836 4.136796 GCCACAAAGATACCATCATGCTA 58.863 43.478 0.00 0.00 0.00 3.49
1795 1837 2.954318 GCCACAAAGATACCATCATGCT 59.046 45.455 0.00 0.00 0.00 3.79
1796 1838 2.035066 GGCCACAAAGATACCATCATGC 59.965 50.000 0.00 0.00 0.00 4.06
1797 1839 2.624838 GGGCCACAAAGATACCATCATG 59.375 50.000 4.39 0.00 0.00 3.07
1798 1840 2.424812 GGGGCCACAAAGATACCATCAT 60.425 50.000 4.39 0.00 0.00 2.45
1799 1841 1.064017 GGGGCCACAAAGATACCATCA 60.064 52.381 4.39 0.00 0.00 3.07
1800 1842 1.692411 GGGGCCACAAAGATACCATC 58.308 55.000 4.39 0.00 0.00 3.51
1801 1843 0.106719 CGGGGCCACAAAGATACCAT 60.107 55.000 5.46 0.00 0.00 3.55
1802 1844 1.301623 CGGGGCCACAAAGATACCA 59.698 57.895 5.46 0.00 0.00 3.25
1803 1845 1.029947 CACGGGGCCACAAAGATACC 61.030 60.000 5.46 0.00 0.00 2.73
1804 1846 1.654023 GCACGGGGCCACAAAGATAC 61.654 60.000 5.46 0.00 36.11 2.24
1805 1847 1.377987 GCACGGGGCCACAAAGATA 60.378 57.895 5.46 0.00 36.11 1.98
1806 1848 2.676471 GCACGGGGCCACAAAGAT 60.676 61.111 5.46 0.00 36.11 2.40
1807 1849 3.884774 AGCACGGGGCCACAAAGA 61.885 61.111 5.46 0.00 46.50 2.52
1808 1850 3.673484 CAGCACGGGGCCACAAAG 61.673 66.667 5.46 0.00 46.50 2.77
1818 1860 4.704833 CCACCAGTCCCAGCACGG 62.705 72.222 0.00 0.00 0.00 4.94
1819 1861 2.959484 ATCCACCAGTCCCAGCACG 61.959 63.158 0.00 0.00 0.00 5.34
1820 1862 1.377725 CATCCACCAGTCCCAGCAC 60.378 63.158 0.00 0.00 0.00 4.40
1821 1863 3.080641 CATCCACCAGTCCCAGCA 58.919 61.111 0.00 0.00 0.00 4.41
1822 1864 2.439156 GCATCCACCAGTCCCAGC 60.439 66.667 0.00 0.00 0.00 4.85
1823 1865 0.839277 TATGCATCCACCAGTCCCAG 59.161 55.000 0.19 0.00 0.00 4.45
1824 1866 0.839277 CTATGCATCCACCAGTCCCA 59.161 55.000 0.19 0.00 0.00 4.37
1825 1867 1.131638 TCTATGCATCCACCAGTCCC 58.868 55.000 0.19 0.00 0.00 4.46
1826 1868 2.105477 ACATCTATGCATCCACCAGTCC 59.895 50.000 0.19 0.00 0.00 3.85
1827 1869 3.482156 ACATCTATGCATCCACCAGTC 57.518 47.619 0.19 0.00 0.00 3.51
1828 1870 3.200605 TCAACATCTATGCATCCACCAGT 59.799 43.478 0.19 0.00 0.00 4.00
1829 1871 3.812262 TCAACATCTATGCATCCACCAG 58.188 45.455 0.19 0.00 0.00 4.00
1830 1872 3.434024 CCTCAACATCTATGCATCCACCA 60.434 47.826 0.19 0.00 0.00 4.17
1831 1873 3.144506 CCTCAACATCTATGCATCCACC 58.855 50.000 0.19 0.00 0.00 4.61
1832 1874 3.562973 CACCTCAACATCTATGCATCCAC 59.437 47.826 0.19 0.00 0.00 4.02
1833 1875 3.455543 TCACCTCAACATCTATGCATCCA 59.544 43.478 0.19 0.00 0.00 3.41
1834 1876 4.063689 CTCACCTCAACATCTATGCATCC 58.936 47.826 0.19 0.00 0.00 3.51
1835 1877 4.063689 CCTCACCTCAACATCTATGCATC 58.936 47.826 0.19 0.00 0.00 3.91
1836 1878 3.746751 GCCTCACCTCAACATCTATGCAT 60.747 47.826 3.79 3.79 0.00 3.96
1837 1879 2.420547 GCCTCACCTCAACATCTATGCA 60.421 50.000 0.00 0.00 0.00 3.96
1838 1880 2.216898 GCCTCACCTCAACATCTATGC 58.783 52.381 0.00 0.00 0.00 3.14
1839 1881 2.171237 TGGCCTCACCTCAACATCTATG 59.829 50.000 3.32 0.00 40.22 2.23
1840 1882 2.437281 CTGGCCTCACCTCAACATCTAT 59.563 50.000 3.32 0.00 40.22 1.98
1841 1883 1.833630 CTGGCCTCACCTCAACATCTA 59.166 52.381 3.32 0.00 40.22 1.98
1842 1884 0.617413 CTGGCCTCACCTCAACATCT 59.383 55.000 3.32 0.00 40.22 2.90
1843 1885 0.615331 TCTGGCCTCACCTCAACATC 59.385 55.000 3.32 0.00 40.22 3.06
1844 1886 0.617413 CTCTGGCCTCACCTCAACAT 59.383 55.000 3.32 0.00 40.22 2.71
1845 1887 1.483595 CCTCTGGCCTCACCTCAACA 61.484 60.000 3.32 0.00 40.22 3.33
1846 1888 1.298014 CCTCTGGCCTCACCTCAAC 59.702 63.158 3.32 0.00 40.22 3.18
1847 1889 1.920325 CCCTCTGGCCTCACCTCAA 60.920 63.158 3.32 0.00 40.22 3.02
1848 1890 2.284921 CCCTCTGGCCTCACCTCA 60.285 66.667 3.32 0.00 40.22 3.86
1849 1891 2.284995 ACCCTCTGGCCTCACCTC 60.285 66.667 3.32 0.00 40.22 3.85
1850 1892 2.608988 CACCCTCTGGCCTCACCT 60.609 66.667 3.32 0.00 40.22 4.00
1851 1893 3.721706 CCACCCTCTGGCCTCACC 61.722 72.222 3.32 0.00 39.84 4.02
1870 1912 2.593468 TTACCTGAGCGCATGGCCTC 62.593 60.000 11.47 0.00 45.17 4.70
1871 1913 2.669133 TTACCTGAGCGCATGGCCT 61.669 57.895 11.47 0.00 45.17 5.19
1872 1914 2.124736 TTACCTGAGCGCATGGCC 60.125 61.111 11.47 0.00 45.17 5.36
1873 1915 1.450312 AGTTACCTGAGCGCATGGC 60.450 57.895 11.47 0.00 44.05 4.40
1874 1916 1.709147 GCAGTTACCTGAGCGCATGG 61.709 60.000 11.47 11.18 41.50 3.66
1875 1917 1.709147 GGCAGTTACCTGAGCGCATG 61.709 60.000 11.47 0.00 41.50 4.06
1876 1918 1.450312 GGCAGTTACCTGAGCGCAT 60.450 57.895 11.47 0.00 41.50 4.73
1877 1919 2.047274 GGCAGTTACCTGAGCGCA 60.047 61.111 11.47 0.00 41.50 6.09
1878 1920 1.234615 TTTGGCAGTTACCTGAGCGC 61.235 55.000 0.00 0.00 41.50 5.92
1879 1921 0.517316 GTTTGGCAGTTACCTGAGCG 59.483 55.000 0.00 0.00 41.50 5.03
1880 1922 1.807142 GAGTTTGGCAGTTACCTGAGC 59.193 52.381 0.00 0.00 41.50 4.26
1881 1923 2.069273 CGAGTTTGGCAGTTACCTGAG 58.931 52.381 0.00 0.00 41.50 3.35
1882 1924 1.270625 CCGAGTTTGGCAGTTACCTGA 60.271 52.381 0.00 0.00 41.50 3.86
1883 1925 1.156736 CCGAGTTTGGCAGTTACCTG 58.843 55.000 0.00 0.00 41.91 4.00
1884 1926 3.625745 CCGAGTTTGGCAGTTACCT 57.374 52.632 0.00 0.00 0.00 3.08
1893 1935 1.531149 CACACTACTTGCCGAGTTTGG 59.469 52.381 0.00 0.00 39.86 3.28
1894 1936 2.210116 ACACACTACTTGCCGAGTTTG 58.790 47.619 0.00 0.00 39.86 2.93
1895 1937 2.614829 ACACACTACTTGCCGAGTTT 57.385 45.000 0.00 0.00 39.86 2.66
1896 1938 2.614829 AACACACTACTTGCCGAGTT 57.385 45.000 0.00 0.00 39.86 3.01
1897 1939 2.159014 TGAAACACACTACTTGCCGAGT 60.159 45.455 0.00 0.00 42.55 4.18
1898 1940 2.479837 TGAAACACACTACTTGCCGAG 58.520 47.619 0.00 0.00 0.00 4.63
1899 1941 2.605837 TGAAACACACTACTTGCCGA 57.394 45.000 0.00 0.00 0.00 5.54
1900 1942 2.598907 CGTTGAAACACACTACTTGCCG 60.599 50.000 0.00 0.00 0.00 5.69
1901 1943 2.610374 TCGTTGAAACACACTACTTGCC 59.390 45.455 0.00 0.00 0.00 4.52
1902 1944 3.303132 CCTCGTTGAAACACACTACTTGC 60.303 47.826 0.00 0.00 0.00 4.01
1903 1945 3.869246 ACCTCGTTGAAACACACTACTTG 59.131 43.478 0.00 0.00 0.00 3.16
1904 1946 3.869246 CACCTCGTTGAAACACACTACTT 59.131 43.478 0.00 0.00 0.00 2.24
1905 1947 3.454375 CACCTCGTTGAAACACACTACT 58.546 45.455 0.00 0.00 0.00 2.57
1906 1948 2.542595 CCACCTCGTTGAAACACACTAC 59.457 50.000 0.00 0.00 0.00 2.73
1907 1949 2.431419 TCCACCTCGTTGAAACACACTA 59.569 45.455 0.00 0.00 0.00 2.74
1908 1950 1.208535 TCCACCTCGTTGAAACACACT 59.791 47.619 0.00 0.00 0.00 3.55
1909 1951 1.658994 TCCACCTCGTTGAAACACAC 58.341 50.000 0.00 0.00 0.00 3.82
1910 1952 2.404923 TTCCACCTCGTTGAAACACA 57.595 45.000 0.00 0.00 0.00 3.72
1911 1953 3.066203 ACATTTCCACCTCGTTGAAACAC 59.934 43.478 0.00 0.00 31.72 3.32
1912 1954 3.066064 CACATTTCCACCTCGTTGAAACA 59.934 43.478 0.00 0.00 31.72 2.83
1913 1955 3.314080 TCACATTTCCACCTCGTTGAAAC 59.686 43.478 0.00 0.00 31.72 2.78
1914 1956 3.546724 TCACATTTCCACCTCGTTGAAA 58.453 40.909 0.00 0.00 33.06 2.69
1915 1957 3.201353 TCACATTTCCACCTCGTTGAA 57.799 42.857 0.00 0.00 0.00 2.69
1916 1958 2.920724 TCACATTTCCACCTCGTTGA 57.079 45.000 0.00 0.00 0.00 3.18
1917 1959 2.414559 GCATCACATTTCCACCTCGTTG 60.415 50.000 0.00 0.00 0.00 4.10
1918 1960 1.812571 GCATCACATTTCCACCTCGTT 59.187 47.619 0.00 0.00 0.00 3.85
1919 1961 1.003580 AGCATCACATTTCCACCTCGT 59.996 47.619 0.00 0.00 0.00 4.18
1920 1962 1.742761 AGCATCACATTTCCACCTCG 58.257 50.000 0.00 0.00 0.00 4.63
1921 1963 3.209410 CCTAGCATCACATTTCCACCTC 58.791 50.000 0.00 0.00 0.00 3.85
1922 1964 2.092212 CCCTAGCATCACATTTCCACCT 60.092 50.000 0.00 0.00 0.00 4.00
1923 1965 2.301346 CCCTAGCATCACATTTCCACC 58.699 52.381 0.00 0.00 0.00 4.61
1924 1966 2.301346 CCCCTAGCATCACATTTCCAC 58.699 52.381 0.00 0.00 0.00 4.02
1925 1967 1.410083 GCCCCTAGCATCACATTTCCA 60.410 52.381 0.00 0.00 42.97 3.53
1926 1968 1.322442 GCCCCTAGCATCACATTTCC 58.678 55.000 0.00 0.00 42.97 3.13
1950 1992 0.166814 CGACAAAGCTAGCACAAGGC 59.833 55.000 18.83 4.84 45.30 4.35
1951 1993 0.798776 CCGACAAAGCTAGCACAAGG 59.201 55.000 18.83 8.44 0.00 3.61
1952 1994 0.166814 GCCGACAAAGCTAGCACAAG 59.833 55.000 18.83 6.22 0.00 3.16
1953 1995 0.533978 TGCCGACAAAGCTAGCACAA 60.534 50.000 18.83 0.00 0.00 3.33
1954 1996 1.070615 TGCCGACAAAGCTAGCACA 59.929 52.632 18.83 0.00 0.00 4.57
1955 1997 1.497722 GTGCCGACAAAGCTAGCAC 59.502 57.895 18.83 0.00 45.99 4.40
1956 1998 0.950555 CAGTGCCGACAAAGCTAGCA 60.951 55.000 18.83 0.00 0.00 3.49
1957 1999 0.670546 TCAGTGCCGACAAAGCTAGC 60.671 55.000 6.62 6.62 0.00 3.42
1958 2000 1.071605 GTCAGTGCCGACAAAGCTAG 58.928 55.000 0.00 0.00 35.88 3.42
1959 2001 0.666274 CGTCAGTGCCGACAAAGCTA 60.666 55.000 0.00 0.00 35.54 3.32
1960 2002 1.956170 CGTCAGTGCCGACAAAGCT 60.956 57.895 0.00 0.00 35.54 3.74
1961 2003 1.495584 TTCGTCAGTGCCGACAAAGC 61.496 55.000 0.00 0.00 35.54 3.51
1962 2004 0.508641 CTTCGTCAGTGCCGACAAAG 59.491 55.000 0.00 0.00 35.54 2.77
1963 2005 0.878523 CCTTCGTCAGTGCCGACAAA 60.879 55.000 0.00 0.00 35.54 2.83
1964 2006 1.300620 CCTTCGTCAGTGCCGACAA 60.301 57.895 0.00 0.00 35.54 3.18
1965 2007 2.338620 CCTTCGTCAGTGCCGACA 59.661 61.111 0.00 0.00 35.54 4.35
1966 2008 3.112709 GCCTTCGTCAGTGCCGAC 61.113 66.667 0.00 0.00 33.41 4.79
1967 2009 2.449031 ATTGCCTTCGTCAGTGCCGA 62.449 55.000 0.00 0.00 0.00 5.54
1968 2010 2.034879 ATTGCCTTCGTCAGTGCCG 61.035 57.895 0.00 0.00 0.00 5.69
1969 2011 1.503542 CATTGCCTTCGTCAGTGCC 59.496 57.895 0.00 0.00 0.00 5.01
1970 2012 1.154150 GCATTGCCTTCGTCAGTGC 60.154 57.895 0.00 0.00 39.36 4.40
1971 2013 1.503542 GGCATTGCCTTCGTCAGTG 59.496 57.895 20.66 0.00 46.69 3.66
1972 2014 3.987404 GGCATTGCCTTCGTCAGT 58.013 55.556 20.66 0.00 46.69 3.41
1986 2028 0.467384 GCTGGAGATGCTCTAAGGCA 59.533 55.000 0.00 0.00 46.63 4.75
1987 2029 0.250252 GGCTGGAGATGCTCTAAGGC 60.250 60.000 0.00 0.00 34.71 4.35
1988 2030 0.033228 CGGCTGGAGATGCTCTAAGG 59.967 60.000 0.00 0.00 0.00 2.69
1989 2031 0.749649 ACGGCTGGAGATGCTCTAAG 59.250 55.000 0.00 0.00 0.00 2.18
1990 2032 0.461548 CACGGCTGGAGATGCTCTAA 59.538 55.000 0.00 0.00 0.00 2.10
1991 2033 2.021068 GCACGGCTGGAGATGCTCTA 62.021 60.000 0.00 0.00 35.16 2.43
1992 2034 2.898738 CACGGCTGGAGATGCTCT 59.101 61.111 0.00 0.00 0.00 4.09
1993 2035 2.894387 GCACGGCTGGAGATGCTC 60.894 66.667 0.00 0.00 35.16 4.26
1994 2036 4.479993 GGCACGGCTGGAGATGCT 62.480 66.667 5.90 0.00 38.18 3.79
1996 2038 4.864334 GGGGCACGGCTGGAGATG 62.864 72.222 0.00 0.00 0.00 2.90
2010 2052 3.963124 GATGGGGTGCTGTTGGGGG 62.963 68.421 0.00 0.00 0.00 5.40
2011 2053 2.362889 GATGGGGTGCTGTTGGGG 60.363 66.667 0.00 0.00 0.00 4.96
2012 2054 2.362889 GGATGGGGTGCTGTTGGG 60.363 66.667 0.00 0.00 0.00 4.12
2013 2055 2.362889 GGGATGGGGTGCTGTTGG 60.363 66.667 0.00 0.00 0.00 3.77
2014 2056 2.362889 GGGGATGGGGTGCTGTTG 60.363 66.667 0.00 0.00 0.00 3.33
2015 2057 3.672503 GGGGGATGGGGTGCTGTT 61.673 66.667 0.00 0.00 0.00 3.16
2016 2058 4.701437 AGGGGGATGGGGTGCTGT 62.701 66.667 0.00 0.00 0.00 4.40
2017 2059 3.813724 GAGGGGGATGGGGTGCTG 61.814 72.222 0.00 0.00 0.00 4.41
2202 2295 1.202698 AGACTGGCTTGACTTTTCGCT 60.203 47.619 0.00 0.00 0.00 4.93
2298 2393 2.158696 GGCAGGGAATGAGCAATCTAGT 60.159 50.000 0.00 0.00 0.00 2.57
2323 2419 3.068732 GGCAAAACCTCTGCTCTCTTTTT 59.931 43.478 0.00 0.00 39.82 1.94
2328 2424 0.320771 TCGGCAAAACCTCTGCTCTC 60.321 55.000 0.00 0.00 39.82 3.20
2429 2534 2.357760 GAACACCTTGCGGGCGTA 60.358 61.111 0.00 0.00 39.10 4.42


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.