Multiple sequence alignment - TraesCS5D01G481400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G481400 chr5D 100.000 3005 0 0 1 3005 519406592 519409596 0.000000e+00 5550.0
1 TraesCS5D01G481400 chr5D 77.321 657 97 27 1272 1914 519407752 519408370 1.030000e-89 340.0
2 TraesCS5D01G481400 chr5D 77.321 657 97 27 1161 1779 519407863 519408505 1.030000e-89 340.0
3 TraesCS5D01G481400 chr5D 83.631 336 38 5 1376 1707 519407757 519408079 1.750000e-77 300.0
4 TraesCS5D01G481400 chr5D 83.631 336 38 5 1166 1488 519407967 519408298 1.750000e-77 300.0
5 TraesCS5D01G481400 chr5A 88.519 1533 126 26 1496 3002 645977110 645978618 0.000000e+00 1810.0
6 TraesCS5D01G481400 chr5A 90.995 744 46 10 399 1126 645976365 645977103 0.000000e+00 983.0
7 TraesCS5D01G481400 chr5A 83.237 173 23 5 139 309 594135313 594135145 1.440000e-33 154.0
8 TraesCS5D01G481400 chr5A 83.636 110 11 3 34 143 645884850 645884952 2.470000e-16 97.1
9 TraesCS5D01G481400 chr5A 91.228 57 5 0 306 362 645884940 645884996 8.930000e-11 78.7
10 TraesCS5D01G481400 chr5B 95.035 705 24 4 2301 3002 653782977 653783673 0.000000e+00 1098.0
11 TraesCS5D01G481400 chr5B 87.714 936 79 10 1272 2195 653782020 653782931 0.000000e+00 1059.0
12 TraesCS5D01G481400 chr5B 87.220 446 42 9 1154 1599 653782013 653782443 7.480000e-136 494.0
13 TraesCS5D01G481400 chr5B 88.856 341 15 10 496 831 653781670 653781992 6.040000e-107 398.0
14 TraesCS5D01G481400 chr5B 85.443 316 30 4 1376 1689 653782025 653782326 6.250000e-82 315.0
15 TraesCS5D01G481400 chr5B 83.891 329 36 6 1161 1488 653782131 653782443 6.300000e-77 298.0
16 TraesCS5D01G481400 chr5B 87.981 208 25 0 1482 1689 653782020 653782227 2.310000e-61 246.0
17 TraesCS5D01G481400 chr5B 89.655 145 13 1 355 499 653742566 653742708 1.840000e-42 183.0
18 TraesCS5D01G481400 chr2D 97.605 167 3 1 139 305 76572549 76572384 4.900000e-73 285.0
19 TraesCS5D01G481400 chr7A 94.048 168 8 2 139 305 82171953 82172119 1.380000e-63 254.0
20 TraesCS5D01G481400 chr6D 89.820 167 16 1 139 305 338811758 338811923 2.350000e-51 213.0
21 TraesCS5D01G481400 chr1D 97.581 124 3 0 182 305 461146750 461146873 2.350000e-51 213.0
22 TraesCS5D01G481400 chr3A 89.349 169 14 3 139 305 727266494 727266660 3.040000e-50 209.0
23 TraesCS5D01G481400 chr6B 88.623 167 16 3 139 305 257239756 257239919 1.830000e-47 200.0
24 TraesCS5D01G481400 chr3B 88.554 166 17 2 139 304 221686934 221687097 1.830000e-47 200.0
25 TraesCS5D01G481400 chr1A 86.826 167 18 3 139 305 589505678 589505840 1.840000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G481400 chr5D 519406592 519409596 3004 False 1366.000000 5550 84.3808 1 3005 5 chr5D.!!$F1 3004
1 TraesCS5D01G481400 chr5A 645976365 645978618 2253 False 1396.500000 1810 89.7570 399 3002 2 chr5A.!!$F2 2603
2 TraesCS5D01G481400 chr5B 653781670 653783673 2003 False 558.285714 1098 88.0200 496 3002 7 chr5B.!!$F2 2506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 289 0.178990 GGCCCGCCCAATATTCTCTT 60.179 55.0 0.00 0.00 0.00 2.85 F
1248 1266 0.037232 CCGTTCCTTCTGGACCAGAC 60.037 60.0 24.24 11.64 43.06 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1363 1381 0.031515 TGGGGAGGACGATGGTGTAT 60.032 55.0 0.00 0.00 0.0 2.29 R
2328 2561 0.391263 AACTCGAGAATGGGCCGTTC 60.391 55.0 27.54 27.54 0.0 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.584608 GATGTGTGGGACGGGAGG 59.415 66.667 0.00 0.00 0.00 4.30
18 19 1.987855 GATGTGTGGGACGGGAGGA 60.988 63.158 0.00 0.00 0.00 3.71
19 20 1.961180 GATGTGTGGGACGGGAGGAG 61.961 65.000 0.00 0.00 0.00 3.69
20 21 3.391382 GTGTGGGACGGGAGGAGG 61.391 72.222 0.00 0.00 0.00 4.30
21 22 3.596799 TGTGGGACGGGAGGAGGA 61.597 66.667 0.00 0.00 0.00 3.71
22 23 2.041819 GTGGGACGGGAGGAGGAT 60.042 66.667 0.00 0.00 0.00 3.24
23 24 1.689582 GTGGGACGGGAGGAGGATT 60.690 63.158 0.00 0.00 0.00 3.01
24 25 1.689233 TGGGACGGGAGGAGGATTG 60.689 63.158 0.00 0.00 0.00 2.67
25 26 2.506472 GGACGGGAGGAGGATTGC 59.494 66.667 0.00 0.00 0.00 3.56
26 27 2.066999 GGACGGGAGGAGGATTGCT 61.067 63.158 0.00 0.00 0.00 3.91
27 28 0.759436 GGACGGGAGGAGGATTGCTA 60.759 60.000 0.00 0.00 0.00 3.49
28 29 1.343069 GACGGGAGGAGGATTGCTAT 58.657 55.000 0.00 0.00 0.00 2.97
29 30 1.001406 GACGGGAGGAGGATTGCTATG 59.999 57.143 0.00 0.00 0.00 2.23
30 31 1.342074 CGGGAGGAGGATTGCTATGA 58.658 55.000 0.00 0.00 0.00 2.15
31 32 1.905215 CGGGAGGAGGATTGCTATGAT 59.095 52.381 0.00 0.00 0.00 2.45
32 33 3.099905 CGGGAGGAGGATTGCTATGATA 58.900 50.000 0.00 0.00 0.00 2.15
33 34 3.708631 CGGGAGGAGGATTGCTATGATAT 59.291 47.826 0.00 0.00 0.00 1.63
34 35 4.895889 CGGGAGGAGGATTGCTATGATATA 59.104 45.833 0.00 0.00 0.00 0.86
35 36 5.363868 CGGGAGGAGGATTGCTATGATATAA 59.636 44.000 0.00 0.00 0.00 0.98
36 37 6.127054 CGGGAGGAGGATTGCTATGATATAAA 60.127 42.308 0.00 0.00 0.00 1.40
37 38 7.419518 CGGGAGGAGGATTGCTATGATATAAAT 60.420 40.741 0.00 0.00 0.00 1.40
38 39 8.938883 GGGAGGAGGATTGCTATGATATAAATA 58.061 37.037 0.00 0.00 0.00 1.40
41 42 9.790344 AGGAGGATTGCTATGATATAAATATGC 57.210 33.333 0.00 0.00 0.00 3.14
42 43 9.565090 GGAGGATTGCTATGATATAAATATGCA 57.435 33.333 0.00 0.00 0.00 3.96
45 46 9.956720 GGATTGCTATGATATAAATATGCAACC 57.043 33.333 0.00 0.00 41.02 3.77
46 47 9.956720 GATTGCTATGATATAAATATGCAACCC 57.043 33.333 0.00 0.00 41.02 4.11
47 48 8.876303 TTGCTATGATATAAATATGCAACCCA 57.124 30.769 0.00 0.00 34.82 4.51
48 49 8.876303 TGCTATGATATAAATATGCAACCCAA 57.124 30.769 0.00 0.00 0.00 4.12
49 50 9.306777 TGCTATGATATAAATATGCAACCCAAA 57.693 29.630 0.00 0.00 0.00 3.28
50 51 9.793252 GCTATGATATAAATATGCAACCCAAAG 57.207 33.333 0.00 0.00 0.00 2.77
80 81 6.410942 AAAAAGTACTACTAACACGGACCT 57.589 37.500 0.00 0.00 0.00 3.85
81 82 6.410942 AAAAGTACTACTAACACGGACCTT 57.589 37.500 0.00 0.00 0.00 3.50
82 83 7.524717 AAAAGTACTACTAACACGGACCTTA 57.475 36.000 0.00 0.00 0.00 2.69
83 84 6.749923 AAGTACTACTAACACGGACCTTAG 57.250 41.667 0.00 0.00 0.00 2.18
84 85 5.189180 AGTACTACTAACACGGACCTTAGG 58.811 45.833 0.00 0.00 0.00 2.69
85 86 3.359950 ACTACTAACACGGACCTTAGGG 58.640 50.000 2.32 0.00 38.88 3.53
95 96 3.077914 ACCTTAGGGTTGTACGCCT 57.922 52.632 2.32 0.00 44.73 5.52
96 97 1.355112 ACCTTAGGGTTGTACGCCTT 58.645 50.000 2.32 1.91 44.73 4.35
97 98 2.539302 ACCTTAGGGTTGTACGCCTTA 58.461 47.619 2.32 1.03 44.73 2.69
98 99 2.234661 ACCTTAGGGTTGTACGCCTTAC 59.765 50.000 2.32 0.00 44.73 2.34
99 100 2.234414 CCTTAGGGTTGTACGCCTTACA 59.766 50.000 6.30 0.00 39.05 2.41
100 101 3.118519 CCTTAGGGTTGTACGCCTTACAT 60.119 47.826 6.30 0.00 40.53 2.29
101 102 2.685850 AGGGTTGTACGCCTTACATC 57.314 50.000 6.30 0.00 40.53 3.06
102 103 1.134907 AGGGTTGTACGCCTTACATCG 60.135 52.381 6.30 0.00 40.53 3.84
103 104 0.648958 GGTTGTACGCCTTACATCGC 59.351 55.000 0.00 0.00 40.53 4.58
104 105 1.352114 GTTGTACGCCTTACATCGCA 58.648 50.000 0.00 0.00 40.53 5.10
105 106 1.060122 GTTGTACGCCTTACATCGCAC 59.940 52.381 0.00 0.00 40.53 5.34
106 107 0.458889 TGTACGCCTTACATCGCACC 60.459 55.000 0.00 0.00 35.64 5.01
107 108 1.226745 TACGCCTTACATCGCACCG 60.227 57.895 0.00 0.00 0.00 4.94
108 109 1.936436 TACGCCTTACATCGCACCGT 61.936 55.000 0.00 0.00 0.00 4.83
109 110 2.514013 CGCCTTACATCGCACCGTC 61.514 63.158 0.00 0.00 0.00 4.79
110 111 2.171725 GCCTTACATCGCACCGTCC 61.172 63.158 0.00 0.00 0.00 4.79
111 112 1.520787 CCTTACATCGCACCGTCCC 60.521 63.158 0.00 0.00 0.00 4.46
112 113 1.216977 CTTACATCGCACCGTCCCA 59.783 57.895 0.00 0.00 0.00 4.37
113 114 1.079681 TTACATCGCACCGTCCCAC 60.080 57.895 0.00 0.00 0.00 4.61
114 115 2.510064 TTACATCGCACCGTCCCACC 62.510 60.000 0.00 0.00 0.00 4.61
127 128 4.320456 CCACCGCACTGCCTCACT 62.320 66.667 0.00 0.00 0.00 3.41
128 129 2.740055 CACCGCACTGCCTCACTC 60.740 66.667 0.00 0.00 0.00 3.51
129 130 2.919856 ACCGCACTGCCTCACTCT 60.920 61.111 0.00 0.00 0.00 3.24
130 131 1.606601 ACCGCACTGCCTCACTCTA 60.607 57.895 0.00 0.00 0.00 2.43
131 132 0.972983 ACCGCACTGCCTCACTCTAT 60.973 55.000 0.00 0.00 0.00 1.98
132 133 1.032794 CCGCACTGCCTCACTCTATA 58.967 55.000 0.00 0.00 0.00 1.31
133 134 1.615883 CCGCACTGCCTCACTCTATAT 59.384 52.381 0.00 0.00 0.00 0.86
134 135 2.608998 CCGCACTGCCTCACTCTATATG 60.609 54.545 0.00 0.00 0.00 1.78
135 136 2.608998 CGCACTGCCTCACTCTATATGG 60.609 54.545 0.00 0.00 0.00 2.74
136 137 2.366916 GCACTGCCTCACTCTATATGGT 59.633 50.000 0.00 0.00 0.00 3.55
137 138 3.574396 GCACTGCCTCACTCTATATGGTA 59.426 47.826 0.00 0.00 0.00 3.25
138 139 4.559704 GCACTGCCTCACTCTATATGGTAC 60.560 50.000 0.00 0.00 0.00 3.34
161 162 2.046507 CGGAGCTTCAGCAAGGCT 60.047 61.111 0.75 0.00 45.16 4.58
197 198 2.526375 CCCTTGGCTGGGGCAAAA 60.526 61.111 7.83 0.00 46.84 2.44
198 199 2.146061 CCCTTGGCTGGGGCAAAAA 61.146 57.895 7.83 0.00 46.84 1.94
223 224 9.474313 AAAATGTTTTATATGAAGTCTAGCCCA 57.526 29.630 0.00 0.00 0.00 5.36
224 225 9.646522 AAATGTTTTATATGAAGTCTAGCCCAT 57.353 29.630 0.00 0.00 0.00 4.00
226 227 9.950496 ATGTTTTATATGAAGTCTAGCCCATAG 57.050 33.333 0.00 0.00 0.00 2.23
227 228 8.934697 TGTTTTATATGAAGTCTAGCCCATAGT 58.065 33.333 0.00 0.00 32.85 2.12
235 236 7.907389 TGAAGTCTAGCCCATAGTAATATTGG 58.093 38.462 0.00 0.00 32.85 3.16
236 237 7.512746 TGAAGTCTAGCCCATAGTAATATTGGT 59.487 37.037 0.00 0.00 32.85 3.67
237 238 7.873699 AGTCTAGCCCATAGTAATATTGGTT 57.126 36.000 0.00 0.00 32.85 3.67
238 239 8.276453 AGTCTAGCCCATAGTAATATTGGTTT 57.724 34.615 0.00 0.00 32.85 3.27
239 240 8.724310 AGTCTAGCCCATAGTAATATTGGTTTT 58.276 33.333 0.00 0.00 32.85 2.43
240 241 9.350951 GTCTAGCCCATAGTAATATTGGTTTTT 57.649 33.333 0.00 0.00 32.85 1.94
264 265 9.452287 TTTTACTTTGTTACCACTCTTTACACT 57.548 29.630 0.00 0.00 0.00 3.55
267 268 8.828688 ACTTTGTTACCACTCTTTACACTATC 57.171 34.615 0.00 0.00 0.00 2.08
268 269 7.876582 ACTTTGTTACCACTCTTTACACTATCC 59.123 37.037 0.00 0.00 0.00 2.59
269 270 5.957798 TGTTACCACTCTTTACACTATCCG 58.042 41.667 0.00 0.00 0.00 4.18
270 271 5.105635 TGTTACCACTCTTTACACTATCCGG 60.106 44.000 0.00 0.00 0.00 5.14
271 272 2.167900 ACCACTCTTTACACTATCCGGC 59.832 50.000 0.00 0.00 0.00 6.13
272 273 2.483188 CCACTCTTTACACTATCCGGCC 60.483 54.545 0.00 0.00 0.00 6.13
273 274 1.761198 ACTCTTTACACTATCCGGCCC 59.239 52.381 0.00 0.00 0.00 5.80
274 275 0.748450 TCTTTACACTATCCGGCCCG 59.252 55.000 0.00 0.00 0.00 6.13
275 276 0.878961 CTTTACACTATCCGGCCCGC 60.879 60.000 0.00 0.00 0.00 6.13
276 277 2.314415 TTTACACTATCCGGCCCGCC 62.314 60.000 0.00 0.00 0.00 6.13
280 281 3.953775 CTATCCGGCCCGCCCAAT 61.954 66.667 0.00 0.00 0.00 3.16
281 282 2.527123 TATCCGGCCCGCCCAATA 60.527 61.111 0.00 0.00 0.00 1.90
282 283 1.910580 CTATCCGGCCCGCCCAATAT 61.911 60.000 0.00 0.00 0.00 1.28
283 284 1.493854 TATCCGGCCCGCCCAATATT 61.494 55.000 0.00 0.00 0.00 1.28
284 285 2.764637 ATCCGGCCCGCCCAATATTC 62.765 60.000 0.00 0.00 0.00 1.75
285 286 2.113139 CGGCCCGCCCAATATTCT 59.887 61.111 0.00 0.00 0.00 2.40
286 287 1.966451 CGGCCCGCCCAATATTCTC 60.966 63.158 0.00 0.00 0.00 2.87
287 288 1.456287 GGCCCGCCCAATATTCTCT 59.544 57.895 0.00 0.00 0.00 3.10
288 289 0.178990 GGCCCGCCCAATATTCTCTT 60.179 55.000 0.00 0.00 0.00 2.85
289 290 0.954452 GCCCGCCCAATATTCTCTTG 59.046 55.000 0.00 0.00 0.00 3.02
290 291 1.609208 CCCGCCCAATATTCTCTTGG 58.391 55.000 0.00 0.00 42.36 3.61
291 292 1.133792 CCCGCCCAATATTCTCTTGGT 60.134 52.381 1.77 0.00 41.35 3.67
292 293 2.105821 CCCGCCCAATATTCTCTTGGTA 59.894 50.000 1.77 0.00 41.35 3.25
293 294 3.403038 CCGCCCAATATTCTCTTGGTAG 58.597 50.000 1.77 0.00 41.35 3.18
294 295 2.808543 CGCCCAATATTCTCTTGGTAGC 59.191 50.000 1.77 0.00 41.35 3.58
295 296 3.495100 CGCCCAATATTCTCTTGGTAGCT 60.495 47.826 0.00 0.00 41.35 3.32
296 297 4.068599 GCCCAATATTCTCTTGGTAGCTC 58.931 47.826 0.00 0.00 41.35 4.09
297 298 4.646572 CCCAATATTCTCTTGGTAGCTCC 58.353 47.826 0.00 0.00 41.35 4.70
298 299 4.310769 CCAATATTCTCTTGGTAGCTCCG 58.689 47.826 0.00 0.00 38.67 4.63
299 300 3.669251 ATATTCTCTTGGTAGCTCCGC 57.331 47.619 0.00 0.00 39.52 5.54
300 301 0.466124 ATTCTCTTGGTAGCTCCGCC 59.534 55.000 0.00 0.00 39.52 6.13
301 302 0.902984 TTCTCTTGGTAGCTCCGCCA 60.903 55.000 0.00 0.00 39.52 5.69
302 303 1.153549 CTCTTGGTAGCTCCGCCAC 60.154 63.158 0.00 0.00 39.52 5.01
303 304 1.608717 CTCTTGGTAGCTCCGCCACT 61.609 60.000 0.00 0.00 39.52 4.00
304 305 1.448540 CTTGGTAGCTCCGCCACTG 60.449 63.158 0.00 0.00 39.52 3.66
305 306 1.888436 CTTGGTAGCTCCGCCACTGA 61.888 60.000 0.00 0.00 39.52 3.41
306 307 1.264749 TTGGTAGCTCCGCCACTGAT 61.265 55.000 0.00 0.00 39.52 2.90
307 308 0.396556 TGGTAGCTCCGCCACTGATA 60.397 55.000 0.00 0.00 39.52 2.15
308 309 0.969894 GGTAGCTCCGCCACTGATAT 59.030 55.000 0.00 0.00 0.00 1.63
309 310 1.337260 GGTAGCTCCGCCACTGATATG 60.337 57.143 0.00 0.00 0.00 1.78
310 311 0.969149 TAGCTCCGCCACTGATATGG 59.031 55.000 0.00 0.00 43.26 2.74
311 312 1.050988 AGCTCCGCCACTGATATGGT 61.051 55.000 0.00 0.00 42.28 3.55
312 313 0.679505 GCTCCGCCACTGATATGGTA 59.320 55.000 0.00 0.00 42.28 3.25
313 314 1.337260 GCTCCGCCACTGATATGGTAG 60.337 57.143 0.00 0.00 42.28 3.18
314 315 2.239400 CTCCGCCACTGATATGGTAGA 58.761 52.381 0.00 0.00 42.28 2.59
315 316 1.961394 TCCGCCACTGATATGGTAGAC 59.039 52.381 0.00 0.00 42.28 2.59
316 317 1.335964 CCGCCACTGATATGGTAGACG 60.336 57.143 0.00 0.00 42.28 4.18
317 318 1.335964 CGCCACTGATATGGTAGACGG 60.336 57.143 0.00 0.00 42.28 4.79
318 319 1.961394 GCCACTGATATGGTAGACGGA 59.039 52.381 0.00 0.00 42.28 4.69
319 320 2.364324 GCCACTGATATGGTAGACGGAA 59.636 50.000 0.00 0.00 42.28 4.30
320 321 3.181469 GCCACTGATATGGTAGACGGAAA 60.181 47.826 0.00 0.00 42.28 3.13
321 322 4.369182 CCACTGATATGGTAGACGGAAAC 58.631 47.826 0.00 0.00 34.77 2.78
322 323 4.142026 CCACTGATATGGTAGACGGAAACA 60.142 45.833 0.00 0.00 34.77 2.83
323 324 5.453339 CCACTGATATGGTAGACGGAAACAT 60.453 44.000 0.00 0.00 34.77 2.71
324 325 5.463392 CACTGATATGGTAGACGGAAACATG 59.537 44.000 0.00 0.00 0.00 3.21
325 326 5.128827 ACTGATATGGTAGACGGAAACATGT 59.871 40.000 0.00 0.00 0.00 3.21
326 327 5.984725 TGATATGGTAGACGGAAACATGTT 58.015 37.500 4.92 4.92 0.00 2.71
327 328 5.815222 TGATATGGTAGACGGAAACATGTTG 59.185 40.000 12.82 2.07 0.00 3.33
328 329 3.478857 TGGTAGACGGAAACATGTTGT 57.521 42.857 12.82 5.75 0.00 3.32
329 330 4.603989 TGGTAGACGGAAACATGTTGTA 57.396 40.909 12.82 0.00 0.00 2.41
330 331 5.155278 TGGTAGACGGAAACATGTTGTAT 57.845 39.130 12.82 5.90 0.00 2.29
331 332 4.932799 TGGTAGACGGAAACATGTTGTATG 59.067 41.667 12.82 5.40 0.00 2.39
332 333 5.172934 GGTAGACGGAAACATGTTGTATGA 58.827 41.667 12.82 0.00 0.00 2.15
333 334 5.640357 GGTAGACGGAAACATGTTGTATGAA 59.360 40.000 12.82 0.00 0.00 2.57
334 335 6.148150 GGTAGACGGAAACATGTTGTATGAAA 59.852 38.462 12.82 0.00 0.00 2.69
335 336 6.817765 AGACGGAAACATGTTGTATGAAAT 57.182 33.333 12.82 0.00 0.00 2.17
336 337 6.611381 AGACGGAAACATGTTGTATGAAATG 58.389 36.000 12.82 0.00 0.00 2.32
337 338 6.206634 AGACGGAAACATGTTGTATGAAATGT 59.793 34.615 12.82 1.23 34.79 2.71
338 339 6.744112 ACGGAAACATGTTGTATGAAATGTT 58.256 32.000 12.82 0.00 43.28 2.71
339 340 6.861055 ACGGAAACATGTTGTATGAAATGTTC 59.139 34.615 12.82 0.88 41.21 3.18
340 341 6.860539 CGGAAACATGTTGTATGAAATGTTCA 59.139 34.615 12.82 0.00 41.21 3.18
341 342 7.380870 CGGAAACATGTTGTATGAAATGTTCAA 59.619 33.333 12.82 0.00 43.95 2.69
342 343 9.206870 GGAAACATGTTGTATGAAATGTTCAAT 57.793 29.630 12.82 0.00 43.95 2.57
346 347 8.914654 ACATGTTGTATGAAATGTTCAATTTCG 58.085 29.630 0.00 0.00 43.95 3.46
347 348 9.127006 CATGTTGTATGAAATGTTCAATTTCGA 57.873 29.630 6.38 0.00 43.95 3.71
348 349 9.689976 ATGTTGTATGAAATGTTCAATTTCGAA 57.310 25.926 0.00 0.00 43.95 3.71
349 350 9.689976 TGTTGTATGAAATGTTCAATTTCGAAT 57.310 25.926 0.00 0.00 43.95 3.34
352 353 9.502145 TGTATGAAATGTTCAATTTCGAATAGC 57.498 29.630 0.00 0.00 43.95 2.97
353 354 9.722056 GTATGAAATGTTCAATTTCGAATAGCT 57.278 29.630 0.00 0.00 43.95 3.32
354 355 8.624701 ATGAAATGTTCAATTTCGAATAGCTG 57.375 30.769 0.00 0.00 43.95 4.24
355 356 7.028962 TGAAATGTTCAATTTCGAATAGCTGG 58.971 34.615 0.00 0.00 40.02 4.85
356 357 4.355543 TGTTCAATTTCGAATAGCTGGC 57.644 40.909 0.00 0.00 0.00 4.85
357 358 4.009675 TGTTCAATTTCGAATAGCTGGCT 58.990 39.130 0.00 0.00 0.00 4.75
358 359 5.182487 TGTTCAATTTCGAATAGCTGGCTA 58.818 37.500 0.00 4.72 0.00 3.93
359 360 5.294306 TGTTCAATTTCGAATAGCTGGCTAG 59.706 40.000 0.00 0.00 31.45 3.42
360 361 5.023533 TCAATTTCGAATAGCTGGCTAGT 57.976 39.130 0.00 5.40 31.45 2.57
361 362 4.811024 TCAATTTCGAATAGCTGGCTAGTG 59.189 41.667 7.30 0.67 31.45 2.74
362 363 2.890808 TTCGAATAGCTGGCTAGTGG 57.109 50.000 7.30 6.52 31.45 4.00
363 364 1.776662 TCGAATAGCTGGCTAGTGGT 58.223 50.000 7.30 0.00 31.45 4.16
364 365 2.940158 TCGAATAGCTGGCTAGTGGTA 58.060 47.619 7.30 0.00 31.45 3.25
365 366 3.497332 TCGAATAGCTGGCTAGTGGTAT 58.503 45.455 7.30 0.00 31.45 2.73
366 367 3.255888 TCGAATAGCTGGCTAGTGGTATG 59.744 47.826 7.30 0.00 31.45 2.39
367 368 3.330267 GAATAGCTGGCTAGTGGTATGC 58.670 50.000 7.30 0.00 31.45 3.14
368 369 1.788229 TAGCTGGCTAGTGGTATGCA 58.212 50.000 0.00 0.00 0.00 3.96
369 370 1.135094 AGCTGGCTAGTGGTATGCAT 58.865 50.000 3.79 3.79 0.00 3.96
370 371 1.202734 AGCTGGCTAGTGGTATGCATG 60.203 52.381 10.16 0.00 0.00 4.06
371 372 1.475751 GCTGGCTAGTGGTATGCATGT 60.476 52.381 10.16 0.00 0.00 3.21
372 373 2.216046 CTGGCTAGTGGTATGCATGTG 58.784 52.381 10.16 0.00 0.00 3.21
373 374 1.559219 TGGCTAGTGGTATGCATGTGT 59.441 47.619 10.16 0.00 0.00 3.72
374 375 1.942657 GGCTAGTGGTATGCATGTGTG 59.057 52.381 10.16 0.00 0.00 3.82
375 376 2.632377 GCTAGTGGTATGCATGTGTGT 58.368 47.619 10.16 0.00 0.00 3.72
376 377 3.431626 GGCTAGTGGTATGCATGTGTGTA 60.432 47.826 10.16 0.00 0.00 2.90
377 378 4.188462 GCTAGTGGTATGCATGTGTGTAA 58.812 43.478 10.16 0.00 0.00 2.41
378 379 4.034048 GCTAGTGGTATGCATGTGTGTAAC 59.966 45.833 10.16 0.00 37.35 2.50
379 380 4.286297 AGTGGTATGCATGTGTGTAACT 57.714 40.909 10.16 0.59 38.04 2.24
380 381 4.651778 AGTGGTATGCATGTGTGTAACTT 58.348 39.130 10.16 0.00 38.04 2.66
381 382 4.455533 AGTGGTATGCATGTGTGTAACTTG 59.544 41.667 10.16 0.00 38.04 3.16
382 383 4.215399 GTGGTATGCATGTGTGTAACTTGT 59.785 41.667 10.16 0.00 38.04 3.16
383 384 4.824537 TGGTATGCATGTGTGTAACTTGTT 59.175 37.500 10.16 0.00 38.04 2.83
384 385 5.049060 TGGTATGCATGTGTGTAACTTGTTC 60.049 40.000 10.16 0.00 38.04 3.18
385 386 3.600717 TGCATGTGTGTAACTTGTTCG 57.399 42.857 0.00 0.00 38.04 3.95
386 387 2.939756 TGCATGTGTGTAACTTGTTCGT 59.060 40.909 0.00 0.00 38.04 3.85
387 388 3.001838 TGCATGTGTGTAACTTGTTCGTC 59.998 43.478 0.00 0.00 38.04 4.20
388 389 3.606153 GCATGTGTGTAACTTGTTCGTCC 60.606 47.826 0.00 0.00 38.04 4.79
389 390 2.195096 TGTGTGTAACTTGTTCGTCCG 58.805 47.619 0.00 0.00 38.04 4.79
390 391 1.523934 GTGTGTAACTTGTTCGTCCGG 59.476 52.381 0.00 0.00 38.04 5.14
391 392 1.136695 TGTGTAACTTGTTCGTCCGGT 59.863 47.619 0.00 0.00 38.04 5.28
392 393 1.788886 GTGTAACTTGTTCGTCCGGTC 59.211 52.381 0.00 0.00 0.00 4.79
393 394 1.682854 TGTAACTTGTTCGTCCGGTCT 59.317 47.619 0.00 0.00 0.00 3.85
394 395 2.101249 TGTAACTTGTTCGTCCGGTCTT 59.899 45.455 0.00 0.00 0.00 3.01
395 396 1.578583 AACTTGTTCGTCCGGTCTTG 58.421 50.000 0.00 0.00 0.00 3.02
396 397 0.878961 ACTTGTTCGTCCGGTCTTGC 60.879 55.000 0.00 0.00 0.00 4.01
397 398 0.878523 CTTGTTCGTCCGGTCTTGCA 60.879 55.000 0.00 0.00 0.00 4.08
408 409 3.016736 CCGGTCTTGCATAAAATGGAGT 58.983 45.455 0.00 0.00 0.00 3.85
430 433 4.019858 TGAGCTGCTATCAGTACTGAGTT 58.980 43.478 28.29 16.58 43.61 3.01
467 470 3.004629 CACACTGGTGCAAAAATAGCTGA 59.995 43.478 0.00 0.00 38.37 4.26
468 471 3.254166 ACACTGGTGCAAAAATAGCTGAG 59.746 43.478 0.00 0.00 0.00 3.35
469 472 3.254166 CACTGGTGCAAAAATAGCTGAGT 59.746 43.478 0.00 0.00 0.00 3.41
556 560 7.962964 TCTGAAGAACGTTTGATTACATCTT 57.037 32.000 0.46 0.00 30.80 2.40
559 563 6.708502 TGAAGAACGTTTGATTACATCTTGGA 59.291 34.615 0.46 0.00 29.27 3.53
566 570 8.450964 ACGTTTGATTACATCTTGGATGTAAAG 58.549 33.333 26.23 15.57 44.53 1.85
571 575 7.442364 TGATTACATCTTGGATGTAAAGCTAGC 59.558 37.037 26.23 6.62 44.53 3.42
617 622 2.072298 GCTAGCGATAATTGCCTGAGG 58.928 52.381 0.00 0.00 0.00 3.86
628 633 0.842030 TGCCTGAGGTGGGAGTTCAT 60.842 55.000 0.00 0.00 0.00 2.57
633 638 3.041211 CTGAGGTGGGAGTTCATATCCA 58.959 50.000 0.00 0.00 38.70 3.41
695 700 2.051345 CACCGTGCCTTCGTTTGC 60.051 61.111 0.00 0.00 0.00 3.68
696 701 3.645975 ACCGTGCCTTCGTTTGCG 61.646 61.111 0.00 0.00 39.92 4.85
735 753 2.442084 GTGGAACGCGTCTTGGTAG 58.558 57.895 14.44 0.00 0.00 3.18
929 947 8.635647 AATCTCAAATGAGGCCCTCTATATAT 57.364 34.615 12.94 0.00 42.30 0.86
936 954 3.725634 AGGCCCTCTATATATTTCGCCT 58.274 45.455 0.00 7.43 40.61 5.52
966 984 2.513435 TGAGCACACAACGCAGCA 60.513 55.556 0.00 0.00 0.00 4.41
990 1008 2.106511 AGGTTGCAAGAAGTAGCCAAGA 59.893 45.455 0.00 0.00 35.66 3.02
1027 1045 4.056125 TGCACGAGAGCACTCCGG 62.056 66.667 5.52 0.00 40.11 5.14
1045 1063 3.882025 CGCTCCTTGTGCTCTTCC 58.118 61.111 0.00 0.00 0.00 3.46
1053 1071 0.601046 TTGTGCTCTTCCTGTCGCTG 60.601 55.000 0.00 0.00 0.00 5.18
1060 1078 0.809241 CTTCCTGTCGCTGATGCTCC 60.809 60.000 0.00 0.00 36.97 4.70
1064 1082 1.005340 CTGTCGCTGATGCTCCTTTC 58.995 55.000 0.00 0.00 36.97 2.62
1069 1087 1.986575 GCTGATGCTCCTTTCCACGC 61.987 60.000 0.00 0.00 36.03 5.34
1071 1089 2.044946 ATGCTCCTTTCCACGCCC 60.045 61.111 0.00 0.00 0.00 6.13
1112 1130 3.780624 GTGATCCAGCACCGGTTAT 57.219 52.632 2.97 0.00 32.68 1.89
1113 1131 1.583054 GTGATCCAGCACCGGTTATC 58.417 55.000 2.97 4.02 32.68 1.75
1114 1132 0.468226 TGATCCAGCACCGGTTATCC 59.532 55.000 2.97 0.00 0.00 2.59
1115 1133 0.759346 GATCCAGCACCGGTTATCCT 59.241 55.000 2.97 0.00 0.00 3.24
1116 1134 0.469917 ATCCAGCACCGGTTATCCTG 59.530 55.000 2.97 9.34 0.00 3.86
1117 1135 1.819632 CCAGCACCGGTTATCCTGC 60.820 63.158 2.97 3.84 35.82 4.85
1118 1136 1.819632 CAGCACCGGTTATCCTGCC 60.820 63.158 2.97 0.00 36.09 4.85
1119 1137 2.516225 GCACCGGTTATCCTGCCC 60.516 66.667 2.97 0.00 31.33 5.36
1120 1138 2.192175 CACCGGTTATCCTGCCCC 59.808 66.667 2.97 0.00 0.00 5.80
1121 1139 3.094498 ACCGGTTATCCTGCCCCC 61.094 66.667 0.00 0.00 0.00 5.40
1122 1140 4.250305 CCGGTTATCCTGCCCCCG 62.250 72.222 0.00 0.00 38.39 5.73
1123 1141 4.929707 CGGTTATCCTGCCCCCGC 62.930 72.222 0.00 0.00 0.00 6.13
1124 1142 4.581093 GGTTATCCTGCCCCCGCC 62.581 72.222 0.00 0.00 0.00 6.13
1125 1143 4.929707 GTTATCCTGCCCCCGCCG 62.930 72.222 0.00 0.00 0.00 6.46
1146 1164 3.484806 ATGCCCGGCGACCCATTA 61.485 61.111 9.30 0.00 0.00 1.90
1158 1176 2.158928 CGACCCATTACCGGTTATTCCA 60.159 50.000 15.04 0.00 32.27 3.53
1216 1234 1.494721 GAGGGTGGGAAGGCATTATGA 59.505 52.381 0.00 0.00 0.00 2.15
1227 1245 0.877071 GCATTATGATGGCACCGAGG 59.123 55.000 0.00 0.00 33.72 4.63
1228 1246 0.877071 CATTATGATGGCACCGAGGC 59.123 55.000 0.00 0.00 44.50 4.70
1237 1255 4.016706 CACCGAGGCCCGTTCCTT 62.017 66.667 0.00 0.00 36.38 3.36
1238 1256 3.703127 ACCGAGGCCCGTTCCTTC 61.703 66.667 0.00 0.00 36.38 3.46
1239 1257 3.391382 CCGAGGCCCGTTCCTTCT 61.391 66.667 0.00 0.00 36.38 2.85
1240 1258 2.125512 CGAGGCCCGTTCCTTCTG 60.126 66.667 0.00 0.00 36.38 3.02
1241 1259 2.269241 GAGGCCCGTTCCTTCTGG 59.731 66.667 0.00 0.00 36.38 3.86
1242 1260 2.203938 AGGCCCGTTCCTTCTGGA 60.204 61.111 0.00 0.00 41.36 3.86
1243 1261 2.046217 GGCCCGTTCCTTCTGGAC 60.046 66.667 0.00 0.00 43.06 4.02
1244 1262 2.046217 GCCCGTTCCTTCTGGACC 60.046 66.667 0.00 0.00 43.06 4.46
1245 1263 2.890766 GCCCGTTCCTTCTGGACCA 61.891 63.158 0.00 0.00 43.06 4.02
1246 1264 1.296715 CCCGTTCCTTCTGGACCAG 59.703 63.158 15.99 15.99 43.06 4.00
1247 1265 1.192146 CCCGTTCCTTCTGGACCAGA 61.192 60.000 20.74 20.74 43.06 3.86
1248 1266 0.037232 CCGTTCCTTCTGGACCAGAC 60.037 60.000 24.24 11.64 43.06 3.51
1249 1267 0.037232 CGTTCCTTCTGGACCAGACC 60.037 60.000 24.24 8.63 43.06 3.85
1250 1268 0.325272 GTTCCTTCTGGACCAGACCC 59.675 60.000 24.24 6.51 43.06 4.46
1251 1269 0.193574 TTCCTTCTGGACCAGACCCT 59.806 55.000 24.24 0.00 43.06 4.34
1252 1270 1.089978 TCCTTCTGGACCAGACCCTA 58.910 55.000 24.24 8.55 40.46 3.53
1253 1271 1.651770 TCCTTCTGGACCAGACCCTAT 59.348 52.381 24.24 0.00 40.46 2.57
1254 1272 2.863238 TCCTTCTGGACCAGACCCTATA 59.137 50.000 24.24 7.41 40.46 1.31
1255 1273 2.966516 CCTTCTGGACCAGACCCTATAC 59.033 54.545 24.24 0.00 40.46 1.47
1256 1274 3.630054 CCTTCTGGACCAGACCCTATACA 60.630 52.174 24.24 5.89 40.46 2.29
1257 1275 3.028094 TCTGGACCAGACCCTATACAC 57.972 52.381 20.74 0.00 35.39 2.90
1258 1276 2.040178 CTGGACCAGACCCTATACACC 58.960 57.143 17.22 0.00 32.44 4.16
1259 1277 1.363280 TGGACCAGACCCTATACACCA 59.637 52.381 0.00 0.00 0.00 4.17
1260 1278 2.022428 TGGACCAGACCCTATACACCAT 60.022 50.000 0.00 0.00 0.00 3.55
1261 1279 3.046374 GGACCAGACCCTATACACCATT 58.954 50.000 0.00 0.00 0.00 3.16
1262 1280 3.181454 GGACCAGACCCTATACACCATTG 60.181 52.174 0.00 0.00 0.00 2.82
1263 1281 3.454812 GACCAGACCCTATACACCATTGT 59.545 47.826 0.00 0.00 40.02 2.71
1264 1282 3.454812 ACCAGACCCTATACACCATTGTC 59.545 47.826 0.00 0.00 37.15 3.18
1265 1283 3.181454 CCAGACCCTATACACCATTGTCC 60.181 52.174 0.00 0.00 37.15 4.02
1266 1284 3.711704 CAGACCCTATACACCATTGTCCT 59.288 47.826 0.00 0.00 37.15 3.85
1267 1285 3.967987 AGACCCTATACACCATTGTCCTC 59.032 47.826 0.00 0.00 37.15 3.71
1268 1286 3.046374 ACCCTATACACCATTGTCCTCC 58.954 50.000 0.00 0.00 37.15 4.30
1269 1287 2.372172 CCCTATACACCATTGTCCTCCC 59.628 54.545 0.00 0.00 37.15 4.30
1270 1288 2.037251 CCTATACACCATTGTCCTCCCG 59.963 54.545 0.00 0.00 37.15 5.14
1271 1289 0.180406 ATACACCATTGTCCTCCCGC 59.820 55.000 0.00 0.00 37.15 6.13
1272 1290 1.906105 TACACCATTGTCCTCCCGCC 61.906 60.000 0.00 0.00 37.15 6.13
1273 1291 3.728373 ACCATTGTCCTCCCGCCC 61.728 66.667 0.00 0.00 0.00 6.13
1274 1292 4.506255 CCATTGTCCTCCCGCCCC 62.506 72.222 0.00 0.00 0.00 5.80
1275 1293 4.856801 CATTGTCCTCCCGCCCCG 62.857 72.222 0.00 0.00 0.00 5.73
1294 1312 3.478274 CTCCCTGCAGGCCTCCTC 61.478 72.222 28.39 0.00 34.51 3.71
1297 1315 3.095163 CCTGCAGGCCTCCTCCAT 61.095 66.667 22.33 0.00 0.00 3.41
1298 1316 2.509916 CTGCAGGCCTCCTCCATC 59.490 66.667 0.00 0.00 0.00 3.51
1299 1317 2.285592 TGCAGGCCTCCTCCATCA 60.286 61.111 0.00 0.00 0.00 3.07
1300 1318 1.918467 CTGCAGGCCTCCTCCATCAA 61.918 60.000 0.00 0.00 0.00 2.57
1301 1319 1.452833 GCAGGCCTCCTCCATCAAC 60.453 63.158 0.00 0.00 0.00 3.18
1302 1320 1.153289 CAGGCCTCCTCCATCAACG 60.153 63.158 0.00 0.00 0.00 4.10
1303 1321 2.190578 GGCCTCCTCCATCAACGG 59.809 66.667 0.00 0.00 0.00 4.44
1304 1322 2.367202 GGCCTCCTCCATCAACGGA 61.367 63.158 0.00 0.00 0.00 4.69
1310 1328 3.309582 TCCATCAACGGAGGAGGC 58.690 61.111 0.00 0.00 0.00 4.70
1311 1329 2.202932 CCATCAACGGAGGAGGCG 60.203 66.667 0.00 0.00 0.00 5.52
1312 1330 2.721167 CCATCAACGGAGGAGGCGA 61.721 63.158 0.00 0.00 0.00 5.54
1313 1331 1.227089 CATCAACGGAGGAGGCGAG 60.227 63.158 0.00 0.00 0.00 5.03
1314 1332 2.427245 ATCAACGGAGGAGGCGAGG 61.427 63.158 0.00 0.00 0.00 4.63
1315 1333 2.856039 ATCAACGGAGGAGGCGAGGA 62.856 60.000 0.00 0.00 0.00 3.71
1316 1334 2.283676 AACGGAGGAGGCGAGGAA 60.284 61.111 0.00 0.00 0.00 3.36
1317 1335 1.911766 AACGGAGGAGGCGAGGAAA 60.912 57.895 0.00 0.00 0.00 3.13
1318 1336 1.889530 AACGGAGGAGGCGAGGAAAG 61.890 60.000 0.00 0.00 0.00 2.62
1319 1337 2.904131 GGAGGAGGCGAGGAAAGG 59.096 66.667 0.00 0.00 0.00 3.11
1320 1338 1.990614 GGAGGAGGCGAGGAAAGGT 60.991 63.158 0.00 0.00 0.00 3.50
1321 1339 1.219393 GAGGAGGCGAGGAAAGGTG 59.781 63.158 0.00 0.00 0.00 4.00
1322 1340 2.436824 GGAGGCGAGGAAAGGTGC 60.437 66.667 0.00 0.00 0.00 5.01
1325 1343 2.044946 GGCGAGGAAAGGTGCCAT 60.045 61.111 0.00 0.00 46.76 4.40
1326 1344 2.409870 GGCGAGGAAAGGTGCCATG 61.410 63.158 0.00 0.00 46.76 3.66
1327 1345 2.409870 GCGAGGAAAGGTGCCATGG 61.410 63.158 7.63 7.63 0.00 3.66
1328 1346 1.002134 CGAGGAAAGGTGCCATGGT 60.002 57.895 14.67 0.00 0.00 3.55
1329 1347 1.308069 CGAGGAAAGGTGCCATGGTG 61.308 60.000 14.67 0.00 0.00 4.17
1330 1348 0.967380 GAGGAAAGGTGCCATGGTGG 60.967 60.000 14.67 0.00 41.55 4.61
1347 1365 4.021925 GCACCGAGGCCTGTTCCT 62.022 66.667 12.00 0.00 39.67 3.36
1348 1366 2.750350 CACCGAGGCCTGTTCCTT 59.250 61.111 12.00 0.00 36.38 3.36
1349 1367 1.376037 CACCGAGGCCTGTTCCTTC 60.376 63.158 12.00 0.00 36.38 3.46
1350 1368 2.269241 CCGAGGCCTGTTCCTTCC 59.731 66.667 12.00 0.00 36.38 3.46
1351 1369 2.125512 CGAGGCCTGTTCCTTCCG 60.126 66.667 12.00 0.00 36.38 4.30
1352 1370 2.269241 GAGGCCTGTTCCTTCCGG 59.731 66.667 12.00 0.00 36.38 5.14
1353 1371 3.330720 AGGCCTGTTCCTTCCGGG 61.331 66.667 3.11 0.00 30.82 5.73
1356 1374 3.646715 CCTGTTCCTTCCGGGCCA 61.647 66.667 4.39 0.00 34.39 5.36
1357 1375 2.434331 CTGTTCCTTCCGGGCCAA 59.566 61.111 4.39 0.00 34.39 4.52
1358 1376 1.228429 CTGTTCCTTCCGGGCCAAA 60.228 57.895 4.39 0.00 34.39 3.28
1359 1377 0.611896 CTGTTCCTTCCGGGCCAAAT 60.612 55.000 4.39 0.00 34.39 2.32
1360 1378 0.610785 TGTTCCTTCCGGGCCAAATC 60.611 55.000 4.39 0.00 34.39 2.17
1361 1379 1.000145 TTCCTTCCGGGCCAAATCC 60.000 57.895 4.39 0.00 34.39 3.01
1362 1380 1.506028 TTCCTTCCGGGCCAAATCCT 61.506 55.000 4.39 0.00 34.39 3.24
1363 1381 0.622154 TCCTTCCGGGCCAAATCCTA 60.622 55.000 4.39 0.00 34.39 2.94
1364 1382 0.478507 CCTTCCGGGCCAAATCCTAT 59.521 55.000 4.39 0.00 0.00 2.57
1365 1383 1.702957 CCTTCCGGGCCAAATCCTATA 59.297 52.381 4.39 0.00 0.00 1.31
1366 1384 2.552373 CCTTCCGGGCCAAATCCTATAC 60.552 54.545 4.39 0.00 0.00 1.47
1367 1385 1.809133 TCCGGGCCAAATCCTATACA 58.191 50.000 4.39 0.00 0.00 2.29
1368 1386 1.418637 TCCGGGCCAAATCCTATACAC 59.581 52.381 4.39 0.00 0.00 2.90
1369 1387 1.544759 CCGGGCCAAATCCTATACACC 60.545 57.143 4.39 0.00 0.00 4.16
1370 1388 1.142060 CGGGCCAAATCCTATACACCA 59.858 52.381 4.39 0.00 0.00 4.17
1371 1389 2.224769 CGGGCCAAATCCTATACACCAT 60.225 50.000 4.39 0.00 0.00 3.55
1372 1390 3.421844 GGGCCAAATCCTATACACCATC 58.578 50.000 4.39 0.00 0.00 3.51
1373 1391 3.074412 GGCCAAATCCTATACACCATCG 58.926 50.000 0.00 0.00 0.00 3.84
1374 1392 3.496160 GGCCAAATCCTATACACCATCGT 60.496 47.826 0.00 0.00 0.00 3.73
1375 1393 3.746492 GCCAAATCCTATACACCATCGTC 59.254 47.826 0.00 0.00 0.00 4.20
1376 1394 4.315803 CCAAATCCTATACACCATCGTCC 58.684 47.826 0.00 0.00 0.00 4.79
1377 1395 4.040461 CCAAATCCTATACACCATCGTCCT 59.960 45.833 0.00 0.00 0.00 3.85
1378 1396 5.230942 CAAATCCTATACACCATCGTCCTC 58.769 45.833 0.00 0.00 0.00 3.71
1379 1397 2.872732 TCCTATACACCATCGTCCTCC 58.127 52.381 0.00 0.00 0.00 4.30
1380 1398 1.893801 CCTATACACCATCGTCCTCCC 59.106 57.143 0.00 0.00 0.00 4.30
1381 1399 1.893801 CTATACACCATCGTCCTCCCC 59.106 57.143 0.00 0.00 0.00 4.81
1382 1400 0.031515 ATACACCATCGTCCTCCCCA 60.032 55.000 0.00 0.00 0.00 4.96
1383 1401 0.974010 TACACCATCGTCCTCCCCAC 60.974 60.000 0.00 0.00 0.00 4.61
1384 1402 2.121832 ACCATCGTCCTCCCCACA 59.878 61.111 0.00 0.00 0.00 4.17
1385 1403 1.990060 ACCATCGTCCTCCCCACAG 60.990 63.158 0.00 0.00 0.00 3.66
1386 1404 2.735772 CCATCGTCCTCCCCACAGG 61.736 68.421 0.00 0.00 34.40 4.00
1387 1405 3.083997 ATCGTCCTCCCCACAGGC 61.084 66.667 0.00 0.00 32.91 4.85
1390 1408 3.403558 GTCCTCCCCACAGGCCTC 61.404 72.222 0.00 0.00 32.91 4.70
1391 1409 4.741239 TCCTCCCCACAGGCCTCC 62.741 72.222 0.00 0.00 32.91 4.30
1392 1410 4.748798 CCTCCCCACAGGCCTCCT 62.749 72.222 0.00 0.00 34.51 3.69
1393 1411 3.086600 CTCCCCACAGGCCTCCTC 61.087 72.222 0.00 0.00 34.51 3.71
1394 1412 4.741239 TCCCCACAGGCCTCCTCC 62.741 72.222 0.00 0.00 34.51 4.30
1396 1414 2.693864 CCCACAGGCCTCCTCCAT 60.694 66.667 0.00 0.00 0.00 3.41
1397 1415 2.750657 CCCACAGGCCTCCTCCATC 61.751 68.421 0.00 0.00 0.00 3.51
1398 1416 1.997311 CCACAGGCCTCCTCCATCA 60.997 63.158 0.00 0.00 0.00 3.07
1399 1417 1.565390 CCACAGGCCTCCTCCATCAA 61.565 60.000 0.00 0.00 0.00 2.57
1400 1418 0.549950 CACAGGCCTCCTCCATCAAT 59.450 55.000 0.00 0.00 0.00 2.57
1401 1419 0.549950 ACAGGCCTCCTCCATCAATG 59.450 55.000 0.00 0.00 0.00 2.82
1414 1432 3.420300 CATCAATGGAGGAGATGAGGG 57.580 52.381 0.00 0.00 41.18 4.30
1415 1433 2.875102 TCAATGGAGGAGATGAGGGA 57.125 50.000 0.00 0.00 0.00 4.20
1416 1434 3.135161 TCAATGGAGGAGATGAGGGAA 57.865 47.619 0.00 0.00 0.00 3.97
1417 1435 3.044156 TCAATGGAGGAGATGAGGGAAG 58.956 50.000 0.00 0.00 0.00 3.46
1418 1436 2.106166 CAATGGAGGAGATGAGGGAAGG 59.894 54.545 0.00 0.00 0.00 3.46
1419 1437 0.719015 TGGAGGAGATGAGGGAAGGT 59.281 55.000 0.00 0.00 0.00 3.50
1420 1438 1.127343 GGAGGAGATGAGGGAAGGTG 58.873 60.000 0.00 0.00 0.00 4.00
1421 1439 1.623834 GGAGGAGATGAGGGAAGGTGT 60.624 57.143 0.00 0.00 0.00 4.16
1422 1440 1.760029 GAGGAGATGAGGGAAGGTGTC 59.240 57.143 0.00 0.00 0.00 3.67
1423 1441 1.079490 AGGAGATGAGGGAAGGTGTCA 59.921 52.381 0.00 0.00 0.00 3.58
1424 1442 2.122768 GGAGATGAGGGAAGGTGTCAT 58.877 52.381 0.00 0.00 33.53 3.06
1425 1443 2.158842 GGAGATGAGGGAAGGTGTCATG 60.159 54.545 0.00 0.00 30.93 3.07
1426 1444 1.842562 AGATGAGGGAAGGTGTCATGG 59.157 52.381 0.00 0.00 30.93 3.66
1427 1445 1.561542 GATGAGGGAAGGTGTCATGGT 59.438 52.381 0.00 0.00 30.93 3.55
1428 1446 0.692476 TGAGGGAAGGTGTCATGGTG 59.308 55.000 0.00 0.00 0.00 4.17
1429 1447 0.035056 GAGGGAAGGTGTCATGGTGG 60.035 60.000 0.00 0.00 0.00 4.61
1430 1448 1.678970 GGGAAGGTGTCATGGTGGC 60.679 63.158 0.00 0.00 0.00 5.01
1431 1449 1.074775 GGAAGGTGTCATGGTGGCA 59.925 57.895 0.00 0.00 0.00 4.92
1435 1453 2.031919 GTGTCATGGTGGCACCGA 59.968 61.111 30.14 19.92 46.55 4.69
1436 1454 1.377202 GTGTCATGGTGGCACCGAT 60.377 57.895 30.14 21.11 46.55 4.18
1437 1455 1.377072 TGTCATGGTGGCACCGATG 60.377 57.895 30.14 29.10 42.58 3.84
1447 1465 3.403936 GCACCGATGCCTATTCCTT 57.596 52.632 0.00 0.00 46.97 3.36
1448 1466 1.230324 GCACCGATGCCTATTCCTTC 58.770 55.000 0.00 0.00 46.97 3.46
1449 1467 1.884235 CACCGATGCCTATTCCTTCC 58.116 55.000 0.00 0.00 0.00 3.46
1450 1468 0.393077 ACCGATGCCTATTCCTTCCG 59.607 55.000 0.00 0.00 0.00 4.30
1451 1469 0.320771 CCGATGCCTATTCCTTCCGG 60.321 60.000 0.00 0.00 0.00 5.14
1452 1470 0.320771 CGATGCCTATTCCTTCCGGG 60.321 60.000 0.00 0.00 0.00 5.73
1453 1471 0.606673 GATGCCTATTCCTTCCGGGC 60.607 60.000 0.00 0.00 42.73 6.13
1454 1472 2.069165 ATGCCTATTCCTTCCGGGCC 62.069 60.000 0.00 0.00 41.84 5.80
1455 1473 2.752807 GCCTATTCCTTCCGGGCCA 61.753 63.158 4.39 0.00 37.12 5.36
1456 1474 1.451936 CCTATTCCTTCCGGGCCAG 59.548 63.158 4.39 0.00 34.39 4.85
1457 1475 1.054406 CCTATTCCTTCCGGGCCAGA 61.054 60.000 4.39 0.00 34.39 3.86
1458 1476 0.106894 CTATTCCTTCCGGGCCAGAC 59.893 60.000 4.39 0.00 34.39 3.51
1459 1477 1.342672 TATTCCTTCCGGGCCAGACC 61.343 60.000 4.39 0.00 37.93 3.85
1469 1487 2.925078 GGCCAGACCCTATACACCA 58.075 57.895 0.00 0.00 0.00 4.17
1470 1488 1.435256 GGCCAGACCCTATACACCAT 58.565 55.000 0.00 0.00 0.00 3.55
1471 1489 1.774856 GGCCAGACCCTATACACCATT 59.225 52.381 0.00 0.00 0.00 3.16
1472 1490 2.487265 GGCCAGACCCTATACACCATTG 60.487 54.545 0.00 0.00 0.00 2.82
1473 1491 2.172717 GCCAGACCCTATACACCATTGT 59.827 50.000 0.00 0.00 40.02 2.71
1474 1492 3.744530 GCCAGACCCTATACACCATTGTC 60.745 52.174 0.00 0.00 37.15 3.18
1475 1493 3.181454 CCAGACCCTATACACCATTGTCC 60.181 52.174 0.00 0.00 37.15 4.02
1476 1494 3.711704 CAGACCCTATACACCATTGTCCT 59.288 47.826 0.00 0.00 37.15 3.85
1477 1495 3.967987 AGACCCTATACACCATTGTCCTC 59.032 47.826 0.00 0.00 37.15 3.71
1478 1496 3.046374 ACCCTATACACCATTGTCCTCC 58.954 50.000 0.00 0.00 37.15 4.30
1479 1497 2.372172 CCCTATACACCATTGTCCTCCC 59.628 54.545 0.00 0.00 37.15 4.30
1480 1498 2.037251 CCTATACACCATTGTCCTCCCG 59.963 54.545 0.00 0.00 37.15 5.14
1481 1499 0.180406 ATACACCATTGTCCTCCCGC 59.820 55.000 0.00 0.00 37.15 6.13
1482 1500 1.906105 TACACCATTGTCCTCCCGCC 61.906 60.000 0.00 0.00 37.15 6.13
1483 1501 3.728373 ACCATTGTCCTCCCGCCC 61.728 66.667 0.00 0.00 0.00 6.13
1484 1502 4.506255 CCATTGTCCTCCCGCCCC 62.506 72.222 0.00 0.00 0.00 5.80
1485 1503 4.856801 CATTGTCCTCCCGCCCCG 62.857 72.222 0.00 0.00 0.00 5.73
1502 1520 4.891037 GGCTCCCTGCATGCCTCC 62.891 72.222 16.68 3.32 45.15 4.30
1503 1521 3.806667 GCTCCCTGCATGCCTCCT 61.807 66.667 16.68 0.00 42.31 3.69
1504 1522 2.509916 CTCCCTGCATGCCTCCTC 59.490 66.667 16.68 0.00 0.00 3.71
1505 1523 2.041762 TCCCTGCATGCCTCCTCT 59.958 61.111 16.68 0.00 0.00 3.69
1506 1524 0.762082 CTCCCTGCATGCCTCCTCTA 60.762 60.000 16.68 0.00 0.00 2.43
1507 1525 0.104777 TCCCTGCATGCCTCCTCTAT 60.105 55.000 16.68 0.00 0.00 1.98
1508 1526 0.324285 CCCTGCATGCCTCCTCTATC 59.676 60.000 16.68 0.00 0.00 2.08
1509 1527 1.054231 CCTGCATGCCTCCTCTATCA 58.946 55.000 16.68 0.00 0.00 2.15
1510 1528 1.419012 CCTGCATGCCTCCTCTATCAA 59.581 52.381 16.68 0.00 0.00 2.57
1511 1529 2.492012 CTGCATGCCTCCTCTATCAAC 58.508 52.381 16.68 0.00 0.00 3.18
1512 1530 1.202568 TGCATGCCTCCTCTATCAACG 60.203 52.381 16.68 0.00 0.00 4.10
1513 1531 1.875576 GCATGCCTCCTCTATCAACGG 60.876 57.143 6.36 0.00 0.00 4.44
1514 1532 1.688735 CATGCCTCCTCTATCAACGGA 59.311 52.381 0.00 0.00 0.00 4.69
1515 1533 2.088104 TGCCTCCTCTATCAACGGAT 57.912 50.000 0.00 0.00 37.55 4.18
1516 1534 1.688735 TGCCTCCTCTATCAACGGATG 59.311 52.381 0.00 0.00 34.89 3.51
1517 1535 1.964223 GCCTCCTCTATCAACGGATGA 59.036 52.381 0.00 0.00 43.67 2.92
1518 1536 2.029470 GCCTCCTCTATCAACGGATGAG 60.029 54.545 0.00 0.00 42.53 2.90
1519 1537 2.560542 CCTCCTCTATCAACGGATGAGG 59.439 54.545 12.81 12.81 42.53 3.86
1520 1538 1.964223 TCCTCTATCAACGGATGAGGC 59.036 52.381 13.60 0.00 42.44 4.70
1521 1539 1.336332 CCTCTATCAACGGATGAGGCG 60.336 57.143 0.00 0.00 42.53 5.52
1522 1540 1.609072 CTCTATCAACGGATGAGGCGA 59.391 52.381 0.00 0.00 42.53 5.54
1523 1541 1.609072 TCTATCAACGGATGAGGCGAG 59.391 52.381 0.00 0.00 42.53 5.03
1524 1542 0.673985 TATCAACGGATGAGGCGAGG 59.326 55.000 0.00 0.00 42.53 4.63
1525 1543 1.043116 ATCAACGGATGAGGCGAGGA 61.043 55.000 0.00 0.00 42.53 3.71
1526 1544 1.218047 CAACGGATGAGGCGAGGAA 59.782 57.895 0.00 0.00 0.00 3.36
1527 1545 0.391130 CAACGGATGAGGCGAGGAAA 60.391 55.000 0.00 0.00 0.00 3.13
1528 1546 0.108138 AACGGATGAGGCGAGGAAAG 60.108 55.000 0.00 0.00 0.00 2.62
1529 1547 1.227380 CGGATGAGGCGAGGAAAGG 60.227 63.158 0.00 0.00 0.00 3.11
1530 1548 1.908483 GGATGAGGCGAGGAAAGGT 59.092 57.895 0.00 0.00 0.00 3.50
1531 1549 0.462759 GGATGAGGCGAGGAAAGGTG 60.463 60.000 0.00 0.00 0.00 4.00
1532 1550 0.250513 GATGAGGCGAGGAAAGGTGT 59.749 55.000 0.00 0.00 0.00 4.16
1533 1551 0.250513 ATGAGGCGAGGAAAGGTGTC 59.749 55.000 0.00 0.00 0.00 3.67
1534 1552 1.118965 TGAGGCGAGGAAAGGTGTCA 61.119 55.000 0.00 0.00 0.00 3.58
1535 1553 0.250513 GAGGCGAGGAAAGGTGTCAT 59.749 55.000 0.00 0.00 0.00 3.06
1536 1554 0.036010 AGGCGAGGAAAGGTGTCATG 60.036 55.000 0.00 0.00 0.00 3.07
1537 1555 1.026718 GGCGAGGAAAGGTGTCATGG 61.027 60.000 0.00 0.00 0.00 3.66
1538 1556 0.321653 GCGAGGAAAGGTGTCATGGT 60.322 55.000 0.00 0.00 0.00 3.55
1539 1557 1.442769 CGAGGAAAGGTGTCATGGTG 58.557 55.000 0.00 0.00 0.00 4.17
1540 1558 1.826385 GAGGAAAGGTGTCATGGTGG 58.174 55.000 0.00 0.00 0.00 4.61
1541 1559 0.251341 AGGAAAGGTGTCATGGTGGC 60.251 55.000 0.00 0.00 0.00 5.01
1542 1560 0.539438 GGAAAGGTGTCATGGTGGCA 60.539 55.000 0.00 0.00 0.00 4.92
1546 1564 2.031919 GTGTCATGGTGGCACCGA 59.968 61.111 30.14 19.92 46.55 4.69
1547 1565 1.599518 GTGTCATGGTGGCACCGAA 60.600 57.895 30.14 15.66 46.55 4.30
1591 1609 2.594131 CTATACACCATCGTCCTCCCA 58.406 52.381 0.00 0.00 0.00 4.37
1644 1761 2.266055 GAGGCGAGGGAAGGTGTG 59.734 66.667 0.00 0.00 0.00 3.82
1726 1942 0.904394 GCCACAACCCCACCATCATT 60.904 55.000 0.00 0.00 0.00 2.57
1768 1984 1.219124 GCATCAACAGAGGAGGCGA 59.781 57.895 0.00 0.00 32.08 5.54
1780 1996 3.798954 GAGGCGAGGGAAGGCGATG 62.799 68.421 0.00 0.00 39.33 3.84
1817 2033 2.353803 CGGTTCCTTCTGGATCGAACTT 60.354 50.000 8.27 0.00 42.81 2.66
1830 2046 8.421002 TCTGGATCGAACTTCATACATAATCAA 58.579 33.333 0.00 0.00 0.00 2.57
1863 2079 1.139520 GCAACCCAACCATCATCGC 59.860 57.895 0.00 0.00 0.00 4.58
1867 2083 1.227943 CCCAACCATCATCGCCGAT 60.228 57.895 0.00 0.00 0.00 4.18
1902 2118 2.031768 GCATCGATGGAGGAGGCC 59.968 66.667 26.00 0.00 35.33 5.19
1977 2193 1.679305 AAACCACAACCACCACGCA 60.679 52.632 0.00 0.00 0.00 5.24
2133 2349 8.230472 ACCTGGATTGTTATCTTTGATCATTC 57.770 34.615 0.00 0.00 0.00 2.67
2187 2403 9.710900 AATATTATCGAGTGATAACATGCAAGA 57.289 29.630 0.00 0.00 46.83 3.02
2190 2406 5.009854 TCGAGTGATAACATGCAAGATGA 57.990 39.130 0.00 0.00 0.00 2.92
2191 2407 5.604565 TCGAGTGATAACATGCAAGATGAT 58.395 37.500 0.00 0.00 0.00 2.45
2284 2515 6.986904 TTTTTGAGCCCGTTTTATTTTTGT 57.013 29.167 0.00 0.00 0.00 2.83
2287 2518 4.865776 TGAGCCCGTTTTATTTTTGTGAG 58.134 39.130 0.00 0.00 0.00 3.51
2288 2519 4.234574 GAGCCCGTTTTATTTTTGTGAGG 58.765 43.478 0.00 0.00 0.00 3.86
2293 2524 6.220201 CCCGTTTTATTTTTGTGAGGATTGT 58.780 36.000 0.00 0.00 0.00 2.71
2294 2525 7.371936 CCCGTTTTATTTTTGTGAGGATTGTA 58.628 34.615 0.00 0.00 0.00 2.41
2295 2526 7.327518 CCCGTTTTATTTTTGTGAGGATTGTAC 59.672 37.037 0.00 0.00 0.00 2.90
2328 2561 0.030101 ACAACGTTTTGGGCGTCATG 59.970 50.000 0.00 0.00 42.10 3.07
2331 2564 0.309612 ACGTTTTGGGCGTCATGAAC 59.690 50.000 0.00 0.00 38.23 3.18
2587 2825 4.100084 TGGCGCATGGACTCCCTG 62.100 66.667 10.83 0.00 0.00 4.45
2692 2930 1.513622 GAGCTCCTTCGTCTCCACC 59.486 63.158 0.87 0.00 0.00 4.61
2793 3031 1.000771 TCTCCGGTGAGACCTCCTG 60.001 63.158 0.00 0.00 42.73 3.86
2822 3060 1.668419 CCCTTATGTTTGAGCCCGAG 58.332 55.000 0.00 0.00 0.00 4.63
2840 3078 0.250727 AGTGTGGCCGTAAATGCTGT 60.251 50.000 0.00 0.00 0.00 4.40
2849 3087 5.183331 TGGCCGTAAATGCTGTTTATTTACA 59.817 36.000 16.28 0.00 44.97 2.41
2868 3106 2.418628 ACACACAGTTTCAGTTTGGACG 59.581 45.455 0.00 0.00 0.00 4.79
2912 3150 2.117206 ACCAGCCGCCAATCCAAA 59.883 55.556 0.00 0.00 0.00 3.28
2914 3152 0.904394 ACCAGCCGCCAATCCAAAAT 60.904 50.000 0.00 0.00 0.00 1.82
2924 3163 6.282930 CCGCCAATCCAAAATATTCTTGAAT 58.717 36.000 10.22 1.35 0.00 2.57
2980 3223 5.908831 ACCTGGGTTCCATATTGTAGTATCA 59.091 40.000 0.00 0.00 30.82 2.15
2981 3224 6.388689 ACCTGGGTTCCATATTGTAGTATCAA 59.611 38.462 0.00 0.00 30.82 2.57
2982 3225 6.710744 CCTGGGTTCCATATTGTAGTATCAAC 59.289 42.308 0.00 0.00 30.82 3.18
2983 3226 7.420214 CCTGGGTTCCATATTGTAGTATCAACT 60.420 40.741 0.00 0.00 34.49 3.16
2984 3227 7.279615 TGGGTTCCATATTGTAGTATCAACTG 58.720 38.462 0.00 0.00 36.36 3.16
3002 3245 3.559069 ACTGAGGGGCACATCATTTATG 58.441 45.455 2.63 0.00 41.74 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.603473 CTCCTCCCGTCCCACACA 60.603 66.667 0.00 0.00 0.00 3.72
3 4 3.391382 CCTCCTCCCGTCCCACAC 61.391 72.222 0.00 0.00 0.00 3.82
4 5 2.471084 AATCCTCCTCCCGTCCCACA 62.471 60.000 0.00 0.00 0.00 4.17
5 6 1.689582 AATCCTCCTCCCGTCCCAC 60.690 63.158 0.00 0.00 0.00 4.61
6 7 1.689233 CAATCCTCCTCCCGTCCCA 60.689 63.158 0.00 0.00 0.00 4.37
7 8 3.108288 GCAATCCTCCTCCCGTCCC 62.108 68.421 0.00 0.00 0.00 4.46
8 9 0.759436 TAGCAATCCTCCTCCCGTCC 60.759 60.000 0.00 0.00 0.00 4.79
9 10 1.001406 CATAGCAATCCTCCTCCCGTC 59.999 57.143 0.00 0.00 0.00 4.79
10 11 1.051812 CATAGCAATCCTCCTCCCGT 58.948 55.000 0.00 0.00 0.00 5.28
11 12 1.342074 TCATAGCAATCCTCCTCCCG 58.658 55.000 0.00 0.00 0.00 5.14
12 13 6.814954 TTATATCATAGCAATCCTCCTCCC 57.185 41.667 0.00 0.00 0.00 4.30
15 16 9.790344 GCATATTTATATCATAGCAATCCTCCT 57.210 33.333 0.00 0.00 0.00 3.69
16 17 9.565090 TGCATATTTATATCATAGCAATCCTCC 57.435 33.333 0.00 0.00 0.00 4.30
19 20 9.956720 GGTTGCATATTTATATCATAGCAATCC 57.043 33.333 0.00 0.00 41.90 3.01
20 21 9.956720 GGGTTGCATATTTATATCATAGCAATC 57.043 33.333 0.00 0.00 41.90 2.67
21 22 9.478238 TGGGTTGCATATTTATATCATAGCAAT 57.522 29.630 0.00 0.00 41.90 3.56
22 23 8.876303 TGGGTTGCATATTTATATCATAGCAA 57.124 30.769 0.00 0.00 38.28 3.91
23 24 8.876303 TTGGGTTGCATATTTATATCATAGCA 57.124 30.769 0.00 0.00 0.00 3.49
24 25 9.793252 CTTTGGGTTGCATATTTATATCATAGC 57.207 33.333 0.00 0.00 0.00 2.97
26 27 9.821240 ACCTTTGGGTTGCATATTTATATCATA 57.179 29.630 0.00 0.00 44.73 2.15
27 28 8.725606 ACCTTTGGGTTGCATATTTATATCAT 57.274 30.769 0.00 0.00 44.73 2.45
28 29 9.647918 TTACCTTTGGGTTGCATATTTATATCA 57.352 29.630 0.00 0.00 44.73 2.15
57 58 6.410942 AGGTCCGTGTTAGTAGTACTTTTT 57.589 37.500 8.40 0.00 0.00 1.94
58 59 6.410942 AAGGTCCGTGTTAGTAGTACTTTT 57.589 37.500 8.40 0.00 0.00 2.27
59 60 6.151817 CCTAAGGTCCGTGTTAGTAGTACTTT 59.848 42.308 8.40 0.00 0.00 2.66
60 61 5.649831 CCTAAGGTCCGTGTTAGTAGTACTT 59.350 44.000 8.40 0.00 0.00 2.24
61 62 5.189180 CCTAAGGTCCGTGTTAGTAGTACT 58.811 45.833 8.14 8.14 0.00 2.73
62 63 4.336713 CCCTAAGGTCCGTGTTAGTAGTAC 59.663 50.000 0.00 0.00 0.00 2.73
63 64 4.018415 ACCCTAAGGTCCGTGTTAGTAGTA 60.018 45.833 0.00 0.00 46.45 1.82
64 65 3.245407 ACCCTAAGGTCCGTGTTAGTAGT 60.245 47.826 0.00 0.00 46.45 2.73
65 66 3.359950 ACCCTAAGGTCCGTGTTAGTAG 58.640 50.000 0.00 0.00 46.45 2.57
66 67 3.456380 ACCCTAAGGTCCGTGTTAGTA 57.544 47.619 0.00 0.00 46.45 1.82
67 68 2.315720 ACCCTAAGGTCCGTGTTAGT 57.684 50.000 0.00 0.00 46.45 2.24
78 79 2.234414 TGTAAGGCGTACAACCCTAAGG 59.766 50.000 10.90 0.00 39.85 2.69
79 80 3.598019 TGTAAGGCGTACAACCCTAAG 57.402 47.619 10.90 0.00 39.85 2.18
80 81 3.429272 CGATGTAAGGCGTACAACCCTAA 60.429 47.826 16.90 0.00 45.81 2.69
81 82 2.099592 CGATGTAAGGCGTACAACCCTA 59.900 50.000 16.90 0.00 45.81 3.53
82 83 1.134907 CGATGTAAGGCGTACAACCCT 60.135 52.381 16.90 0.77 45.81 4.34
83 84 1.283736 CGATGTAAGGCGTACAACCC 58.716 55.000 16.90 8.66 45.81 4.11
84 85 0.648958 GCGATGTAAGGCGTACAACC 59.351 55.000 16.90 10.85 45.81 3.77
85 86 1.060122 GTGCGATGTAAGGCGTACAAC 59.940 52.381 16.90 13.24 45.81 3.32
86 87 1.352114 GTGCGATGTAAGGCGTACAA 58.648 50.000 16.90 0.00 45.81 2.41
87 88 0.458889 GGTGCGATGTAAGGCGTACA 60.459 55.000 15.42 15.42 46.72 2.90
88 89 1.477030 CGGTGCGATGTAAGGCGTAC 61.477 60.000 3.49 3.49 41.36 3.67
89 90 1.226745 CGGTGCGATGTAAGGCGTA 60.227 57.895 0.00 0.00 0.00 4.42
90 91 2.508439 CGGTGCGATGTAAGGCGT 60.508 61.111 0.00 0.00 0.00 5.68
91 92 2.508439 ACGGTGCGATGTAAGGCG 60.508 61.111 0.00 0.00 0.00 5.52
92 93 2.171725 GGACGGTGCGATGTAAGGC 61.172 63.158 0.00 0.00 0.00 4.35
93 94 1.520787 GGGACGGTGCGATGTAAGG 60.521 63.158 0.00 0.00 0.00 2.69
94 95 1.082117 GTGGGACGGTGCGATGTAAG 61.082 60.000 0.00 0.00 0.00 2.34
95 96 1.079681 GTGGGACGGTGCGATGTAA 60.080 57.895 0.00 0.00 0.00 2.41
96 97 2.574929 GTGGGACGGTGCGATGTA 59.425 61.111 0.00 0.00 0.00 2.29
97 98 4.388499 GGTGGGACGGTGCGATGT 62.388 66.667 0.00 0.00 0.00 3.06
110 111 4.320456 AGTGAGGCAGTGCGGTGG 62.320 66.667 9.45 0.00 0.00 4.61
111 112 1.877576 TAGAGTGAGGCAGTGCGGTG 61.878 60.000 9.45 0.00 0.00 4.94
112 113 0.972983 ATAGAGTGAGGCAGTGCGGT 60.973 55.000 9.45 0.00 0.00 5.68
113 114 1.032794 TATAGAGTGAGGCAGTGCGG 58.967 55.000 9.45 0.00 0.00 5.69
114 115 2.608998 CCATATAGAGTGAGGCAGTGCG 60.609 54.545 9.45 0.00 0.00 5.34
115 116 2.366916 ACCATATAGAGTGAGGCAGTGC 59.633 50.000 6.55 6.55 0.00 4.40
116 117 4.584743 TGTACCATATAGAGTGAGGCAGTG 59.415 45.833 0.00 0.00 0.00 3.66
117 118 4.585162 GTGTACCATATAGAGTGAGGCAGT 59.415 45.833 0.00 0.00 0.00 4.40
118 119 4.021894 GGTGTACCATATAGAGTGAGGCAG 60.022 50.000 0.00 0.00 35.64 4.85
119 120 3.895656 GGTGTACCATATAGAGTGAGGCA 59.104 47.826 0.00 0.00 35.64 4.75
120 121 3.057456 CGGTGTACCATATAGAGTGAGGC 60.057 52.174 1.50 0.00 35.14 4.70
121 122 3.506455 CCGGTGTACCATATAGAGTGAGG 59.494 52.174 0.00 0.00 35.14 3.86
122 123 3.057456 GCCGGTGTACCATATAGAGTGAG 60.057 52.174 1.90 0.00 35.14 3.51
123 124 2.889045 GCCGGTGTACCATATAGAGTGA 59.111 50.000 1.90 0.00 35.14 3.41
124 125 2.351447 CGCCGGTGTACCATATAGAGTG 60.351 54.545 6.91 0.00 35.14 3.51
125 126 1.884579 CGCCGGTGTACCATATAGAGT 59.115 52.381 6.91 0.00 35.14 3.24
126 127 1.201647 CCGCCGGTGTACCATATAGAG 59.798 57.143 15.14 0.00 35.14 2.43
127 128 1.202915 TCCGCCGGTGTACCATATAGA 60.203 52.381 15.14 0.00 35.14 1.98
128 129 1.201647 CTCCGCCGGTGTACCATATAG 59.798 57.143 15.14 0.00 35.14 1.31
129 130 1.250328 CTCCGCCGGTGTACCATATA 58.750 55.000 15.14 0.00 35.14 0.86
130 131 2.046938 CTCCGCCGGTGTACCATAT 58.953 57.895 15.14 0.00 35.14 1.78
131 132 2.788640 GCTCCGCCGGTGTACCATA 61.789 63.158 15.14 0.00 35.14 2.74
132 133 4.157120 GCTCCGCCGGTGTACCAT 62.157 66.667 15.14 0.00 35.14 3.55
134 135 4.078516 AAGCTCCGCCGGTGTACC 62.079 66.667 15.14 0.92 0.00 3.34
135 136 2.508663 GAAGCTCCGCCGGTGTAC 60.509 66.667 15.14 2.47 0.00 2.90
136 137 2.992689 TGAAGCTCCGCCGGTGTA 60.993 61.111 15.14 0.00 0.00 2.90
137 138 4.379243 CTGAAGCTCCGCCGGTGT 62.379 66.667 15.14 0.00 0.00 4.16
141 142 3.494336 CTTGCTGAAGCTCCGCCG 61.494 66.667 3.61 0.00 42.66 6.46
142 143 3.130160 CCTTGCTGAAGCTCCGCC 61.130 66.667 3.61 0.00 42.66 6.13
143 144 3.808656 GCCTTGCTGAAGCTCCGC 61.809 66.667 3.61 0.00 42.66 5.54
144 145 2.046507 AGCCTTGCTGAAGCTCCG 60.047 61.111 3.61 0.00 42.66 4.63
159 160 2.580815 GCCATTGGCCCTTTCAGC 59.419 61.111 17.28 0.00 44.06 4.26
181 182 3.560989 TTTTTGCCCCAGCCAAGG 58.439 55.556 0.00 0.00 38.69 3.61
197 198 9.474313 TGGGCTAGACTTCATATAAAACATTTT 57.526 29.630 0.00 0.00 0.00 1.82
198 199 9.646522 ATGGGCTAGACTTCATATAAAACATTT 57.353 29.630 0.00 0.00 0.00 2.32
200 201 9.950496 CTATGGGCTAGACTTCATATAAAACAT 57.050 33.333 0.00 0.00 0.00 2.71
201 202 8.934697 ACTATGGGCTAGACTTCATATAAAACA 58.065 33.333 0.00 0.00 0.00 2.83
209 210 8.543774 CCAATATTACTATGGGCTAGACTTCAT 58.456 37.037 0.00 0.00 0.00 2.57
210 211 7.512746 ACCAATATTACTATGGGCTAGACTTCA 59.487 37.037 0.00 0.00 32.18 3.02
211 212 7.908453 ACCAATATTACTATGGGCTAGACTTC 58.092 38.462 0.00 0.00 32.18 3.01
212 213 7.873699 ACCAATATTACTATGGGCTAGACTT 57.126 36.000 0.00 0.00 32.18 3.01
213 214 7.873699 AACCAATATTACTATGGGCTAGACT 57.126 36.000 0.00 0.00 32.18 3.24
214 215 8.919777 AAAACCAATATTACTATGGGCTAGAC 57.080 34.615 0.00 0.00 32.18 2.59
247 248 5.346522 CCGGATAGTGTAAAGAGTGGTAAC 58.653 45.833 0.00 0.00 0.00 2.50
248 249 4.142093 GCCGGATAGTGTAAAGAGTGGTAA 60.142 45.833 5.05 0.00 0.00 2.85
249 250 3.382546 GCCGGATAGTGTAAAGAGTGGTA 59.617 47.826 5.05 0.00 0.00 3.25
250 251 2.167900 GCCGGATAGTGTAAAGAGTGGT 59.832 50.000 5.05 0.00 0.00 4.16
251 252 2.483188 GGCCGGATAGTGTAAAGAGTGG 60.483 54.545 5.05 0.00 0.00 4.00
252 253 2.483188 GGGCCGGATAGTGTAAAGAGTG 60.483 54.545 5.05 0.00 0.00 3.51
253 254 1.761198 GGGCCGGATAGTGTAAAGAGT 59.239 52.381 5.05 0.00 0.00 3.24
254 255 1.269621 CGGGCCGGATAGTGTAAAGAG 60.270 57.143 20.56 0.00 0.00 2.85
255 256 0.748450 CGGGCCGGATAGTGTAAAGA 59.252 55.000 20.56 0.00 0.00 2.52
256 257 0.878961 GCGGGCCGGATAGTGTAAAG 60.879 60.000 29.48 0.00 0.00 1.85
257 258 1.144496 GCGGGCCGGATAGTGTAAA 59.856 57.895 29.48 0.00 0.00 2.01
258 259 2.799452 GGCGGGCCGGATAGTGTAA 61.799 63.158 29.48 0.00 0.00 2.41
259 260 3.228759 GGCGGGCCGGATAGTGTA 61.229 66.667 29.48 0.00 0.00 2.90
263 264 1.910580 ATATTGGGCGGGCCGGATAG 61.911 60.000 29.48 0.00 36.85 2.08
264 265 1.493854 AATATTGGGCGGGCCGGATA 61.494 55.000 29.48 15.90 36.85 2.59
265 266 2.764637 GAATATTGGGCGGGCCGGAT 62.765 60.000 29.48 14.27 36.85 4.18
266 267 3.485346 GAATATTGGGCGGGCCGGA 62.485 63.158 29.48 7.53 36.85 5.14
267 268 2.983592 GAATATTGGGCGGGCCGG 60.984 66.667 29.48 9.71 36.85 6.13
268 269 1.966451 GAGAATATTGGGCGGGCCG 60.966 63.158 24.35 24.35 36.85 6.13
269 270 0.178990 AAGAGAATATTGGGCGGGCC 60.179 55.000 14.65 14.65 0.00 5.80
270 271 0.954452 CAAGAGAATATTGGGCGGGC 59.046 55.000 0.00 0.00 0.00 6.13
271 272 1.609208 CCAAGAGAATATTGGGCGGG 58.391 55.000 0.00 0.00 42.95 6.13
294 295 2.029828 GTCTACCATATCAGTGGCGGAG 60.030 54.545 0.00 0.00 43.27 4.63
295 296 1.961394 GTCTACCATATCAGTGGCGGA 59.039 52.381 0.00 0.00 43.27 5.54
296 297 1.335964 CGTCTACCATATCAGTGGCGG 60.336 57.143 0.00 0.00 43.27 6.13
297 298 1.335964 CCGTCTACCATATCAGTGGCG 60.336 57.143 0.00 0.00 43.27 5.69
298 299 1.961394 TCCGTCTACCATATCAGTGGC 59.039 52.381 0.00 0.00 43.27 5.01
299 300 4.142026 TGTTTCCGTCTACCATATCAGTGG 60.142 45.833 0.00 0.00 45.04 4.00
300 301 5.006153 TGTTTCCGTCTACCATATCAGTG 57.994 43.478 0.00 0.00 0.00 3.66
301 302 5.128827 ACATGTTTCCGTCTACCATATCAGT 59.871 40.000 0.00 0.00 0.00 3.41
302 303 5.601662 ACATGTTTCCGTCTACCATATCAG 58.398 41.667 0.00 0.00 0.00 2.90
303 304 5.607939 ACATGTTTCCGTCTACCATATCA 57.392 39.130 0.00 0.00 0.00 2.15
304 305 5.815740 ACAACATGTTTCCGTCTACCATATC 59.184 40.000 8.77 0.00 0.00 1.63
305 306 5.741011 ACAACATGTTTCCGTCTACCATAT 58.259 37.500 8.77 0.00 0.00 1.78
306 307 5.155278 ACAACATGTTTCCGTCTACCATA 57.845 39.130 8.77 0.00 0.00 2.74
307 308 4.015872 ACAACATGTTTCCGTCTACCAT 57.984 40.909 8.77 0.00 0.00 3.55
308 309 3.478857 ACAACATGTTTCCGTCTACCA 57.521 42.857 8.77 0.00 0.00 3.25
309 310 5.172934 TCATACAACATGTTTCCGTCTACC 58.827 41.667 8.77 0.00 0.00 3.18
310 311 6.715344 TTCATACAACATGTTTCCGTCTAC 57.285 37.500 8.77 0.00 0.00 2.59
311 312 7.389330 ACATTTCATACAACATGTTTCCGTCTA 59.611 33.333 8.77 0.00 0.00 2.59
312 313 6.206634 ACATTTCATACAACATGTTTCCGTCT 59.793 34.615 8.77 0.00 0.00 4.18
313 314 6.378582 ACATTTCATACAACATGTTTCCGTC 58.621 36.000 8.77 0.00 0.00 4.79
314 315 6.325919 ACATTTCATACAACATGTTTCCGT 57.674 33.333 8.77 6.82 0.00 4.69
315 316 6.860539 TGAACATTTCATACAACATGTTTCCG 59.139 34.615 8.77 0.07 39.43 4.30
316 317 8.586570 TTGAACATTTCATACAACATGTTTCC 57.413 30.769 8.77 0.00 39.43 3.13
320 321 8.914654 CGAAATTGAACATTTCATACAACATGT 58.085 29.630 0.00 0.00 39.84 3.21
321 322 9.127006 TCGAAATTGAACATTTCATACAACATG 57.873 29.630 7.81 0.00 39.84 3.21
322 323 9.689976 TTCGAAATTGAACATTTCATACAACAT 57.310 25.926 0.00 0.00 39.84 2.71
323 324 9.689976 ATTCGAAATTGAACATTTCATACAACA 57.310 25.926 0.00 0.00 39.84 3.33
326 327 9.502145 GCTATTCGAAATTGAACATTTCATACA 57.498 29.630 0.00 0.00 39.84 2.29
327 328 9.722056 AGCTATTCGAAATTGAACATTTCATAC 57.278 29.630 0.00 0.00 39.84 2.39
328 329 9.720667 CAGCTATTCGAAATTGAACATTTCATA 57.279 29.630 0.00 0.01 39.84 2.15
329 330 7.703621 CCAGCTATTCGAAATTGAACATTTCAT 59.296 33.333 0.00 0.00 39.84 2.57
330 331 7.028962 CCAGCTATTCGAAATTGAACATTTCA 58.971 34.615 0.00 0.00 37.76 2.69
331 332 6.020360 GCCAGCTATTCGAAATTGAACATTTC 60.020 38.462 0.00 0.00 35.34 2.17
332 333 5.807011 GCCAGCTATTCGAAATTGAACATTT 59.193 36.000 0.00 0.00 0.00 2.32
333 334 5.126061 AGCCAGCTATTCGAAATTGAACATT 59.874 36.000 0.00 0.00 0.00 2.71
334 335 4.641989 AGCCAGCTATTCGAAATTGAACAT 59.358 37.500 0.00 0.00 0.00 2.71
335 336 4.009675 AGCCAGCTATTCGAAATTGAACA 58.990 39.130 0.00 0.00 0.00 3.18
336 337 4.622701 AGCCAGCTATTCGAAATTGAAC 57.377 40.909 0.00 0.00 0.00 3.18
337 338 5.294306 CACTAGCCAGCTATTCGAAATTGAA 59.706 40.000 0.00 0.00 0.00 2.69
338 339 4.811024 CACTAGCCAGCTATTCGAAATTGA 59.189 41.667 0.00 0.00 0.00 2.57
339 340 4.024556 CCACTAGCCAGCTATTCGAAATTG 60.025 45.833 0.00 0.00 0.00 2.32
340 341 4.130118 CCACTAGCCAGCTATTCGAAATT 58.870 43.478 0.00 0.00 0.00 1.82
341 342 3.134804 ACCACTAGCCAGCTATTCGAAAT 59.865 43.478 0.00 0.00 0.00 2.17
342 343 2.500098 ACCACTAGCCAGCTATTCGAAA 59.500 45.455 0.00 0.00 0.00 3.46
343 344 2.108168 ACCACTAGCCAGCTATTCGAA 58.892 47.619 0.00 0.00 0.00 3.71
344 345 1.776662 ACCACTAGCCAGCTATTCGA 58.223 50.000 0.00 0.00 0.00 3.71
345 346 3.579709 CATACCACTAGCCAGCTATTCG 58.420 50.000 0.00 0.00 0.00 3.34
346 347 3.244215 TGCATACCACTAGCCAGCTATTC 60.244 47.826 0.00 0.00 0.00 1.75
347 348 2.705658 TGCATACCACTAGCCAGCTATT 59.294 45.455 0.00 0.00 0.00 1.73
348 349 2.329267 TGCATACCACTAGCCAGCTAT 58.671 47.619 0.00 0.00 0.00 2.97
349 350 1.788229 TGCATACCACTAGCCAGCTA 58.212 50.000 0.00 0.00 0.00 3.32
350 351 1.135094 ATGCATACCACTAGCCAGCT 58.865 50.000 0.00 0.00 0.00 4.24
351 352 1.233019 CATGCATACCACTAGCCAGC 58.767 55.000 0.00 0.00 0.00 4.85
352 353 2.216046 CACATGCATACCACTAGCCAG 58.784 52.381 0.00 0.00 0.00 4.85
353 354 1.559219 ACACATGCATACCACTAGCCA 59.441 47.619 0.00 0.00 0.00 4.75
354 355 1.942657 CACACATGCATACCACTAGCC 59.057 52.381 0.00 0.00 0.00 3.93
355 356 2.632377 ACACACATGCATACCACTAGC 58.368 47.619 0.00 0.00 0.00 3.42
356 357 5.419542 AGTTACACACATGCATACCACTAG 58.580 41.667 0.00 0.00 0.00 2.57
357 358 5.414789 AGTTACACACATGCATACCACTA 57.585 39.130 0.00 0.00 0.00 2.74
358 359 4.286297 AGTTACACACATGCATACCACT 57.714 40.909 0.00 0.00 0.00 4.00
359 360 4.215399 ACAAGTTACACACATGCATACCAC 59.785 41.667 0.00 0.00 0.00 4.16
360 361 4.393834 ACAAGTTACACACATGCATACCA 58.606 39.130 0.00 0.00 0.00 3.25
361 362 5.371115 AACAAGTTACACACATGCATACC 57.629 39.130 0.00 0.00 0.00 2.73
362 363 5.079406 CGAACAAGTTACACACATGCATAC 58.921 41.667 0.00 0.00 0.00 2.39
363 364 4.752604 ACGAACAAGTTACACACATGCATA 59.247 37.500 0.00 0.00 0.00 3.14
364 365 3.563808 ACGAACAAGTTACACACATGCAT 59.436 39.130 0.00 0.00 0.00 3.96
365 366 2.939756 ACGAACAAGTTACACACATGCA 59.060 40.909 0.00 0.00 0.00 3.96
366 367 3.541711 GACGAACAAGTTACACACATGC 58.458 45.455 0.00 0.00 0.00 4.06
367 368 3.362596 CGGACGAACAAGTTACACACATG 60.363 47.826 0.00 0.00 0.00 3.21
368 369 2.798283 CGGACGAACAAGTTACACACAT 59.202 45.455 0.00 0.00 0.00 3.21
369 370 2.195096 CGGACGAACAAGTTACACACA 58.805 47.619 0.00 0.00 0.00 3.72
370 371 1.523934 CCGGACGAACAAGTTACACAC 59.476 52.381 0.00 0.00 0.00 3.82
371 372 1.136695 ACCGGACGAACAAGTTACACA 59.863 47.619 9.46 0.00 0.00 3.72
372 373 1.788886 GACCGGACGAACAAGTTACAC 59.211 52.381 9.46 0.00 0.00 2.90
373 374 1.682854 AGACCGGACGAACAAGTTACA 59.317 47.619 9.46 0.00 0.00 2.41
374 375 2.428888 AGACCGGACGAACAAGTTAC 57.571 50.000 9.46 0.00 0.00 2.50
375 376 2.746269 CAAGACCGGACGAACAAGTTA 58.254 47.619 9.46 0.00 0.00 2.24
376 377 1.578583 CAAGACCGGACGAACAAGTT 58.421 50.000 9.46 0.00 0.00 2.66
377 378 0.878961 GCAAGACCGGACGAACAAGT 60.879 55.000 9.46 0.00 0.00 3.16
378 379 0.878523 TGCAAGACCGGACGAACAAG 60.879 55.000 9.46 0.00 0.00 3.16
379 380 0.250124 ATGCAAGACCGGACGAACAA 60.250 50.000 9.46 0.00 0.00 2.83
380 381 0.604073 TATGCAAGACCGGACGAACA 59.396 50.000 9.46 3.02 0.00 3.18
381 382 1.717194 TTATGCAAGACCGGACGAAC 58.283 50.000 9.46 0.00 0.00 3.95
382 383 2.459060 TTTATGCAAGACCGGACGAA 57.541 45.000 9.46 0.00 0.00 3.85
383 384 2.459060 TTTTATGCAAGACCGGACGA 57.541 45.000 9.46 0.00 0.00 4.20
384 385 2.223249 CCATTTTATGCAAGACCGGACG 60.223 50.000 9.46 0.00 0.00 4.79
385 386 3.013921 TCCATTTTATGCAAGACCGGAC 58.986 45.455 9.46 0.10 0.00 4.79
386 387 3.278574 CTCCATTTTATGCAAGACCGGA 58.721 45.455 9.46 0.00 0.00 5.14
387 388 3.016736 ACTCCATTTTATGCAAGACCGG 58.983 45.455 0.00 0.00 0.00 5.28
388 389 3.689161 TCACTCCATTTTATGCAAGACCG 59.311 43.478 0.00 0.00 0.00 4.79
389 390 4.439289 GCTCACTCCATTTTATGCAAGACC 60.439 45.833 0.00 0.00 0.00 3.85
390 391 4.397417 AGCTCACTCCATTTTATGCAAGAC 59.603 41.667 0.00 0.00 0.00 3.01
391 392 4.397103 CAGCTCACTCCATTTTATGCAAGA 59.603 41.667 0.00 0.00 0.00 3.02
392 393 4.669318 CAGCTCACTCCATTTTATGCAAG 58.331 43.478 0.00 0.00 0.00 4.01
393 394 3.119388 GCAGCTCACTCCATTTTATGCAA 60.119 43.478 0.00 0.00 0.00 4.08
394 395 2.424601 GCAGCTCACTCCATTTTATGCA 59.575 45.455 0.00 0.00 0.00 3.96
395 396 2.686915 AGCAGCTCACTCCATTTTATGC 59.313 45.455 0.00 0.00 0.00 3.14
396 397 5.761726 TGATAGCAGCTCACTCCATTTTATG 59.238 40.000 0.00 0.00 0.00 1.90
397 398 5.933617 TGATAGCAGCTCACTCCATTTTAT 58.066 37.500 0.00 0.00 0.00 1.40
408 409 3.625853 ACTCAGTACTGATAGCAGCTCA 58.374 45.455 25.35 0.00 46.26 4.26
467 470 3.670055 CGTCGTTGGTCGTTTGTAATACT 59.330 43.478 0.00 0.00 40.80 2.12
468 471 3.425193 ACGTCGTTGGTCGTTTGTAATAC 59.575 43.478 0.00 0.00 40.80 1.89
469 472 3.424861 CACGTCGTTGGTCGTTTGTAATA 59.575 43.478 0.00 0.00 38.23 0.98
526 529 9.872757 TGTAATCAAACGTTCTTCAGATTTTAC 57.127 29.630 0.00 4.38 0.00 2.01
617 622 4.593206 TGGTATCTGGATATGAACTCCCAC 59.407 45.833 0.00 0.00 31.32 4.61
628 633 7.400339 AGAAGAAAAGACACTGGTATCTGGATA 59.600 37.037 0.00 0.00 0.00 2.59
633 638 7.067496 TGAAGAAGAAAAGACACTGGTATCT 57.933 36.000 0.00 0.00 0.00 1.98
695 700 7.817478 TCCACTTTAACATGCATATAGTATCCG 59.183 37.037 0.00 0.00 0.00 4.18
696 701 9.502091 TTCCACTTTAACATGCATATAGTATCC 57.498 33.333 0.00 0.00 0.00 2.59
735 753 7.376072 GGCAAAGAGACGTAAAATATGTATTGC 59.624 37.037 0.00 0.00 35.13 3.56
897 915 4.502087 GGGCCTCATTTGAGATTAATTGGC 60.502 45.833 9.15 2.34 44.74 4.52
901 919 5.659849 AGAGGGCCTCATTTGAGATTAAT 57.340 39.130 33.86 6.80 44.74 1.40
966 984 2.230660 GGCTACTTCTTGCAACCTGTT 58.769 47.619 0.00 0.00 0.00 3.16
1027 1045 2.394563 GGAAGAGCACAAGGAGCGC 61.395 63.158 0.00 0.00 37.01 5.92
1053 1071 2.115291 GGGCGTGGAAAGGAGCATC 61.115 63.158 0.00 0.00 0.00 3.91
1060 1078 1.741770 CGGAAGAGGGCGTGGAAAG 60.742 63.158 0.00 0.00 0.00 2.62
1102 1120 2.516225 GGGCAGGATAACCGGTGC 60.516 66.667 8.52 5.75 41.83 5.01
1104 1122 3.094498 GGGGGCAGGATAACCGGT 61.094 66.667 0.00 0.00 41.83 5.28
1105 1123 4.250305 CGGGGGCAGGATAACCGG 62.250 72.222 0.00 0.00 40.79 5.28
1106 1124 4.929707 GCGGGGGCAGGATAACCG 62.930 72.222 0.00 0.00 46.78 4.44
1107 1125 4.581093 GGCGGGGGCAGGATAACC 62.581 72.222 0.00 0.00 0.00 2.85
1108 1126 4.929707 CGGCGGGGGCAGGATAAC 62.930 72.222 0.00 0.00 0.00 1.89
1128 1146 3.765894 TAATGGGTCGCCGGGCATG 62.766 63.158 20.71 3.40 0.00 4.06
1129 1147 3.484806 TAATGGGTCGCCGGGCAT 61.485 61.111 20.71 0.79 0.00 4.40
1130 1148 4.476752 GTAATGGGTCGCCGGGCA 62.477 66.667 20.71 3.24 0.00 5.36
1132 1150 4.903010 CGGTAATGGGTCGCCGGG 62.903 72.222 2.18 0.00 40.45 5.73
1134 1152 2.295472 TAACCGGTAATGGGTCGCCG 62.295 60.000 8.00 0.00 43.40 6.46
1135 1153 0.107268 ATAACCGGTAATGGGTCGCC 59.893 55.000 8.00 0.00 36.57 5.54
1136 1154 1.869132 GAATAACCGGTAATGGGTCGC 59.131 52.381 8.00 0.00 36.57 5.19
1137 1155 2.158928 TGGAATAACCGGTAATGGGTCG 60.159 50.000 8.00 0.00 42.61 4.79
1138 1156 3.564053 TGGAATAACCGGTAATGGGTC 57.436 47.619 8.00 0.00 42.61 4.46
1139 1157 3.181437 GGATGGAATAACCGGTAATGGGT 60.181 47.826 8.00 0.00 42.61 4.51
1140 1158 3.418047 GGATGGAATAACCGGTAATGGG 58.582 50.000 8.00 0.00 42.61 4.00
1141 1159 3.418047 GGGATGGAATAACCGGTAATGG 58.582 50.000 8.00 0.00 42.61 3.16
1142 1160 3.418047 GGGGATGGAATAACCGGTAATG 58.582 50.000 8.00 0.00 42.61 1.90
1143 1161 2.039348 CGGGGATGGAATAACCGGTAAT 59.961 50.000 8.00 0.00 40.67 1.89
1144 1162 1.417145 CGGGGATGGAATAACCGGTAA 59.583 52.381 8.00 0.00 40.67 2.85
1145 1163 1.050204 CGGGGATGGAATAACCGGTA 58.950 55.000 8.00 0.00 40.67 4.02
1146 1164 1.834301 CGGGGATGGAATAACCGGT 59.166 57.895 0.00 0.00 40.67 5.28
1196 1214 1.494721 TCATAATGCCTTCCCACCCTC 59.505 52.381 0.00 0.00 0.00 4.30
1199 1217 2.242043 CCATCATAATGCCTTCCCACC 58.758 52.381 0.00 0.00 0.00 4.61
1233 1251 1.089978 TAGGGTCTGGTCCAGAAGGA 58.910 55.000 23.49 6.55 42.46 3.36
1234 1252 2.182516 ATAGGGTCTGGTCCAGAAGG 57.817 55.000 23.49 0.00 42.46 3.46
1235 1253 3.385111 GTGTATAGGGTCTGGTCCAGAAG 59.615 52.174 23.49 0.00 42.46 2.85
1236 1254 3.371965 GTGTATAGGGTCTGGTCCAGAA 58.628 50.000 23.49 8.33 42.46 3.02
1237 1255 2.358932 GGTGTATAGGGTCTGGTCCAGA 60.359 54.545 18.15 18.15 38.25 3.86
1238 1256 2.040178 GGTGTATAGGGTCTGGTCCAG 58.960 57.143 13.21 13.21 0.00 3.86
1239 1257 1.363280 TGGTGTATAGGGTCTGGTCCA 59.637 52.381 0.00 0.00 0.00 4.02
1240 1258 2.170012 TGGTGTATAGGGTCTGGTCC 57.830 55.000 0.00 0.00 0.00 4.46
1241 1259 3.454812 ACAATGGTGTATAGGGTCTGGTC 59.545 47.826 0.00 0.00 35.72 4.02
1242 1260 3.454812 GACAATGGTGTATAGGGTCTGGT 59.545 47.826 0.00 0.00 38.41 4.00
1243 1261 3.181454 GGACAATGGTGTATAGGGTCTGG 60.181 52.174 0.00 0.00 38.41 3.86
1244 1262 3.711704 AGGACAATGGTGTATAGGGTCTG 59.288 47.826 0.00 0.00 38.41 3.51
1245 1263 3.967987 GAGGACAATGGTGTATAGGGTCT 59.032 47.826 0.00 0.00 38.41 3.85
1246 1264 3.071167 GGAGGACAATGGTGTATAGGGTC 59.929 52.174 0.00 0.00 38.41 4.46
1247 1265 3.046374 GGAGGACAATGGTGTATAGGGT 58.954 50.000 0.00 0.00 38.41 4.34
1248 1266 2.372172 GGGAGGACAATGGTGTATAGGG 59.628 54.545 0.00 0.00 38.41 3.53
1249 1267 2.037251 CGGGAGGACAATGGTGTATAGG 59.963 54.545 0.00 0.00 38.41 2.57
1250 1268 2.548067 GCGGGAGGACAATGGTGTATAG 60.548 54.545 0.00 0.00 38.41 1.31
1251 1269 1.414919 GCGGGAGGACAATGGTGTATA 59.585 52.381 0.00 0.00 38.41 1.47
1252 1270 0.180406 GCGGGAGGACAATGGTGTAT 59.820 55.000 0.00 0.00 38.41 2.29
1253 1271 1.600107 GCGGGAGGACAATGGTGTA 59.400 57.895 0.00 0.00 38.41 2.90
1254 1272 2.351276 GCGGGAGGACAATGGTGT 59.649 61.111 0.00 0.00 42.10 4.16
1255 1273 2.438434 GGCGGGAGGACAATGGTG 60.438 66.667 0.00 0.00 0.00 4.17
1256 1274 3.728373 GGGCGGGAGGACAATGGT 61.728 66.667 0.00 0.00 0.00 3.55
1257 1275 4.506255 GGGGCGGGAGGACAATGG 62.506 72.222 0.00 0.00 0.00 3.16
1258 1276 4.856801 CGGGGCGGGAGGACAATG 62.857 72.222 0.00 0.00 0.00 2.82
1277 1295 3.478274 GAGGAGGCCTGCAGGGAG 61.478 72.222 33.46 9.60 37.23 4.30
1283 1301 1.452833 GTTGATGGAGGAGGCCTGC 60.453 63.158 18.04 18.04 42.53 4.85
1284 1302 1.153289 CGTTGATGGAGGAGGCCTG 60.153 63.158 12.00 0.00 31.76 4.85
1285 1303 2.370445 CCGTTGATGGAGGAGGCCT 61.370 63.158 3.86 3.86 36.03 5.19
1286 1304 2.190578 CCGTTGATGGAGGAGGCC 59.809 66.667 0.00 0.00 0.00 5.19
1287 1305 3.309582 TCCGTTGATGGAGGAGGC 58.690 61.111 0.00 0.00 33.05 4.70
1293 1311 2.721167 CGCCTCCTCCGTTGATGGA 61.721 63.158 0.00 0.00 36.37 3.41
1294 1312 2.202932 CGCCTCCTCCGTTGATGG 60.203 66.667 0.00 0.00 0.00 3.51
1295 1313 1.227089 CTCGCCTCCTCCGTTGATG 60.227 63.158 0.00 0.00 0.00 3.07
1296 1314 2.427245 CCTCGCCTCCTCCGTTGAT 61.427 63.158 0.00 0.00 0.00 2.57
1297 1315 3.068691 CCTCGCCTCCTCCGTTGA 61.069 66.667 0.00 0.00 0.00 3.18
1298 1316 2.167398 TTTCCTCGCCTCCTCCGTTG 62.167 60.000 0.00 0.00 0.00 4.10
1299 1317 1.889530 CTTTCCTCGCCTCCTCCGTT 61.890 60.000 0.00 0.00 0.00 4.44
1300 1318 2.283676 TTTCCTCGCCTCCTCCGT 60.284 61.111 0.00 0.00 0.00 4.69
1301 1319 2.496817 CTTTCCTCGCCTCCTCCG 59.503 66.667 0.00 0.00 0.00 4.63
1302 1320 1.990614 ACCTTTCCTCGCCTCCTCC 60.991 63.158 0.00 0.00 0.00 4.30
1303 1321 1.219393 CACCTTTCCTCGCCTCCTC 59.781 63.158 0.00 0.00 0.00 3.71
1304 1322 2.960688 GCACCTTTCCTCGCCTCCT 61.961 63.158 0.00 0.00 0.00 3.69
1305 1323 2.436824 GCACCTTTCCTCGCCTCC 60.437 66.667 0.00 0.00 0.00 4.30
1306 1324 2.436824 GGCACCTTTCCTCGCCTC 60.437 66.667 0.00 0.00 41.50 4.70
1307 1325 2.606587 ATGGCACCTTTCCTCGCCT 61.607 57.895 0.00 0.00 45.13 5.52
1308 1326 2.044946 ATGGCACCTTTCCTCGCC 60.045 61.111 0.00 0.00 45.11 5.54
1309 1327 2.409870 CCATGGCACCTTTCCTCGC 61.410 63.158 0.00 0.00 0.00 5.03
1310 1328 1.002134 ACCATGGCACCTTTCCTCG 60.002 57.895 13.04 0.00 0.00 4.63
1311 1329 0.967380 CCACCATGGCACCTTTCCTC 60.967 60.000 13.04 0.00 0.00 3.71
1312 1330 1.077265 CCACCATGGCACCTTTCCT 59.923 57.895 13.04 0.00 0.00 3.36
1313 1331 3.698765 CCACCATGGCACCTTTCC 58.301 61.111 13.04 0.00 0.00 3.13
1330 1348 3.553095 AAGGAACAGGCCTCGGTGC 62.553 63.158 0.00 2.41 37.26 5.01
1331 1349 1.376037 GAAGGAACAGGCCTCGGTG 60.376 63.158 0.00 0.00 37.26 4.94
1332 1350 2.593956 GGAAGGAACAGGCCTCGGT 61.594 63.158 0.00 0.00 37.26 4.69
1333 1351 2.269241 GGAAGGAACAGGCCTCGG 59.731 66.667 0.00 0.00 37.26 4.63
1334 1352 2.125512 CGGAAGGAACAGGCCTCG 60.126 66.667 0.00 0.52 37.26 4.63
1346 1364 2.105821 TGTATAGGATTTGGCCCGGAAG 59.894 50.000 0.73 0.00 0.00 3.46
1347 1365 2.128535 TGTATAGGATTTGGCCCGGAA 58.871 47.619 0.73 0.00 0.00 4.30
1348 1366 1.418637 GTGTATAGGATTTGGCCCGGA 59.581 52.381 0.73 0.00 0.00 5.14
1349 1367 1.544759 GGTGTATAGGATTTGGCCCGG 60.545 57.143 0.00 0.00 0.00 5.73
1350 1368 1.142060 TGGTGTATAGGATTTGGCCCG 59.858 52.381 0.00 0.00 0.00 6.13
1351 1369 3.421844 GATGGTGTATAGGATTTGGCCC 58.578 50.000 0.00 0.00 0.00 5.80
1352 1370 3.074412 CGATGGTGTATAGGATTTGGCC 58.926 50.000 0.00 0.00 0.00 5.36
1353 1371 3.740115 ACGATGGTGTATAGGATTTGGC 58.260 45.455 0.00 0.00 0.00 4.52
1354 1372 4.040461 AGGACGATGGTGTATAGGATTTGG 59.960 45.833 0.00 0.00 0.00 3.28
1355 1373 5.215252 AGGACGATGGTGTATAGGATTTG 57.785 43.478 0.00 0.00 0.00 2.32
1356 1374 4.283722 GGAGGACGATGGTGTATAGGATTT 59.716 45.833 0.00 0.00 0.00 2.17
1357 1375 3.833070 GGAGGACGATGGTGTATAGGATT 59.167 47.826 0.00 0.00 0.00 3.01
1358 1376 3.432378 GGAGGACGATGGTGTATAGGAT 58.568 50.000 0.00 0.00 0.00 3.24
1359 1377 2.490351 GGGAGGACGATGGTGTATAGGA 60.490 54.545 0.00 0.00 0.00 2.94
1360 1378 1.893801 GGGAGGACGATGGTGTATAGG 59.106 57.143 0.00 0.00 0.00 2.57
1361 1379 1.893801 GGGGAGGACGATGGTGTATAG 59.106 57.143 0.00 0.00 0.00 1.31
1362 1380 1.218450 TGGGGAGGACGATGGTGTATA 59.782 52.381 0.00 0.00 0.00 1.47
1363 1381 0.031515 TGGGGAGGACGATGGTGTAT 60.032 55.000 0.00 0.00 0.00 2.29
1364 1382 0.974010 GTGGGGAGGACGATGGTGTA 60.974 60.000 0.00 0.00 0.00 2.90
1365 1383 2.121832 TGGGGAGGACGATGGTGT 59.878 61.111 0.00 0.00 0.00 4.16
1366 1384 2.244117 CTGTGGGGAGGACGATGGTG 62.244 65.000 0.00 0.00 0.00 4.17
1367 1385 1.990060 CTGTGGGGAGGACGATGGT 60.990 63.158 0.00 0.00 0.00 3.55
1368 1386 2.735772 CCTGTGGGGAGGACGATGG 61.736 68.421 0.00 0.00 34.69 3.51
1369 1387 2.903357 CCTGTGGGGAGGACGATG 59.097 66.667 0.00 0.00 34.69 3.84
1370 1388 3.083997 GCCTGTGGGGAGGACGAT 61.084 66.667 0.00 0.00 34.69 3.73
1373 1391 3.403558 GAGGCCTGTGGGGAGGAC 61.404 72.222 12.00 0.00 42.30 3.85
1374 1392 4.741239 GGAGGCCTGTGGGGAGGA 62.741 72.222 12.00 0.00 34.69 3.71
1375 1393 4.748798 AGGAGGCCTGTGGGGAGG 62.749 72.222 12.00 0.00 37.23 4.30
1376 1394 3.086600 GAGGAGGCCTGTGGGGAG 61.087 72.222 12.00 0.00 37.23 4.30
1377 1395 4.741239 GGAGGAGGCCTGTGGGGA 62.741 72.222 12.00 0.00 37.23 4.81
1379 1397 2.693864 ATGGAGGAGGCCTGTGGG 60.694 66.667 12.00 0.00 31.76 4.61
1380 1398 1.565390 TTGATGGAGGAGGCCTGTGG 61.565 60.000 12.00 0.00 31.76 4.17
1381 1399 0.549950 ATTGATGGAGGAGGCCTGTG 59.450 55.000 12.00 0.00 31.76 3.66
1382 1400 0.549950 CATTGATGGAGGAGGCCTGT 59.450 55.000 12.00 0.00 31.76 4.00
1383 1401 3.416253 CATTGATGGAGGAGGCCTG 57.584 57.895 12.00 0.00 31.76 4.85
1394 1412 2.977580 TCCCTCATCTCCTCCATTGATG 59.022 50.000 0.00 0.00 38.97 3.07
1395 1413 3.357482 TCCCTCATCTCCTCCATTGAT 57.643 47.619 0.00 0.00 0.00 2.57
1396 1414 2.875102 TCCCTCATCTCCTCCATTGA 57.125 50.000 0.00 0.00 0.00 2.57
1397 1415 2.106166 CCTTCCCTCATCTCCTCCATTG 59.894 54.545 0.00 0.00 0.00 2.82
1398 1416 2.294127 ACCTTCCCTCATCTCCTCCATT 60.294 50.000 0.00 0.00 0.00 3.16
1399 1417 1.296523 ACCTTCCCTCATCTCCTCCAT 59.703 52.381 0.00 0.00 0.00 3.41
1400 1418 0.719015 ACCTTCCCTCATCTCCTCCA 59.281 55.000 0.00 0.00 0.00 3.86
1401 1419 1.127343 CACCTTCCCTCATCTCCTCC 58.873 60.000 0.00 0.00 0.00 4.30
1402 1420 1.760029 GACACCTTCCCTCATCTCCTC 59.240 57.143 0.00 0.00 0.00 3.71
1403 1421 1.079490 TGACACCTTCCCTCATCTCCT 59.921 52.381 0.00 0.00 0.00 3.69
1404 1422 1.573108 TGACACCTTCCCTCATCTCC 58.427 55.000 0.00 0.00 0.00 3.71
1405 1423 2.158842 CCATGACACCTTCCCTCATCTC 60.159 54.545 0.00 0.00 0.00 2.75
1406 1424 1.842562 CCATGACACCTTCCCTCATCT 59.157 52.381 0.00 0.00 0.00 2.90
1407 1425 1.561542 ACCATGACACCTTCCCTCATC 59.438 52.381 0.00 0.00 0.00 2.92
1408 1426 1.283029 CACCATGACACCTTCCCTCAT 59.717 52.381 0.00 0.00 0.00 2.90
1409 1427 0.692476 CACCATGACACCTTCCCTCA 59.308 55.000 0.00 0.00 0.00 3.86
1410 1428 0.035056 CCACCATGACACCTTCCCTC 60.035 60.000 0.00 0.00 0.00 4.30
1411 1429 2.078452 CCACCATGACACCTTCCCT 58.922 57.895 0.00 0.00 0.00 4.20
1412 1430 1.678970 GCCACCATGACACCTTCCC 60.679 63.158 0.00 0.00 0.00 3.97
1413 1431 1.074775 TGCCACCATGACACCTTCC 59.925 57.895 0.00 0.00 0.00 3.46
1414 1432 2.257353 GTGCCACCATGACACCTTC 58.743 57.895 0.00 0.00 0.00 3.46
1415 1433 4.500265 GTGCCACCATGACACCTT 57.500 55.556 0.00 0.00 0.00 3.50
1418 1436 1.377202 ATCGGTGCCACCATGACAC 60.377 57.895 15.45 0.00 38.47 3.67
1419 1437 1.377072 CATCGGTGCCACCATGACA 60.377 57.895 15.45 0.00 38.47 3.58
1420 1438 2.764314 GCATCGGTGCCACCATGAC 61.764 63.158 22.44 13.59 45.76 3.06
1421 1439 2.438254 GCATCGGTGCCACCATGA 60.438 61.111 22.44 11.15 45.76 3.07
1430 1448 1.873903 CGGAAGGAATAGGCATCGGTG 60.874 57.143 0.00 0.00 0.00 4.94
1431 1449 0.393077 CGGAAGGAATAGGCATCGGT 59.607 55.000 0.00 0.00 0.00 4.69
1432 1450 3.217242 CGGAAGGAATAGGCATCGG 57.783 57.895 0.00 0.00 0.00 4.18
1451 1469 1.435256 ATGGTGTATAGGGTCTGGCC 58.565 55.000 0.00 0.00 0.00 5.36
1452 1470 2.172717 ACAATGGTGTATAGGGTCTGGC 59.827 50.000 0.00 0.00 35.72 4.85
1453 1471 3.181454 GGACAATGGTGTATAGGGTCTGG 60.181 52.174 0.00 0.00 38.41 3.86
1454 1472 3.711704 AGGACAATGGTGTATAGGGTCTG 59.288 47.826 0.00 0.00 38.41 3.51
1455 1473 3.967987 GAGGACAATGGTGTATAGGGTCT 59.032 47.826 0.00 0.00 38.41 3.85
1456 1474 3.071167 GGAGGACAATGGTGTATAGGGTC 59.929 52.174 0.00 0.00 38.41 4.46
1457 1475 3.046374 GGAGGACAATGGTGTATAGGGT 58.954 50.000 0.00 0.00 38.41 4.34
1458 1476 2.372172 GGGAGGACAATGGTGTATAGGG 59.628 54.545 0.00 0.00 38.41 3.53
1459 1477 2.037251 CGGGAGGACAATGGTGTATAGG 59.963 54.545 0.00 0.00 38.41 2.57
1460 1478 2.548067 GCGGGAGGACAATGGTGTATAG 60.548 54.545 0.00 0.00 38.41 1.31
1461 1479 1.414919 GCGGGAGGACAATGGTGTATA 59.585 52.381 0.00 0.00 38.41 1.47
1462 1480 0.180406 GCGGGAGGACAATGGTGTAT 59.820 55.000 0.00 0.00 38.41 2.29
1463 1481 1.600107 GCGGGAGGACAATGGTGTA 59.400 57.895 0.00 0.00 38.41 2.90
1464 1482 2.351276 GCGGGAGGACAATGGTGT 59.649 61.111 0.00 0.00 42.10 4.16
1465 1483 2.438434 GGCGGGAGGACAATGGTG 60.438 66.667 0.00 0.00 0.00 4.17
1466 1484 3.728373 GGGCGGGAGGACAATGGT 61.728 66.667 0.00 0.00 0.00 3.55
1467 1485 4.506255 GGGGCGGGAGGACAATGG 62.506 72.222 0.00 0.00 0.00 3.16
1468 1486 4.856801 CGGGGCGGGAGGACAATG 62.857 72.222 0.00 0.00 0.00 2.82
1486 1504 3.771110 GAGGAGGCATGCAGGGAGC 62.771 68.421 21.36 0.00 45.96 4.70
1487 1505 0.762082 TAGAGGAGGCATGCAGGGAG 60.762 60.000 21.36 0.00 0.00 4.30
1488 1506 0.104777 ATAGAGGAGGCATGCAGGGA 60.105 55.000 21.36 0.00 0.00 4.20
1489 1507 0.324285 GATAGAGGAGGCATGCAGGG 59.676 60.000 21.36 0.00 0.00 4.45
1490 1508 1.054231 TGATAGAGGAGGCATGCAGG 58.946 55.000 21.36 0.00 0.00 4.85
1491 1509 2.492012 GTTGATAGAGGAGGCATGCAG 58.508 52.381 21.36 0.00 0.00 4.41
1492 1510 1.202568 CGTTGATAGAGGAGGCATGCA 60.203 52.381 21.36 0.00 0.00 3.96
1493 1511 1.506493 CGTTGATAGAGGAGGCATGC 58.494 55.000 9.90 9.90 0.00 4.06
1494 1512 1.688735 TCCGTTGATAGAGGAGGCATG 59.311 52.381 0.00 0.00 0.00 4.06
1495 1513 2.088104 TCCGTTGATAGAGGAGGCAT 57.912 50.000 0.00 0.00 0.00 4.40
1496 1514 1.688735 CATCCGTTGATAGAGGAGGCA 59.311 52.381 0.00 0.00 37.49 4.75
1497 1515 1.964223 TCATCCGTTGATAGAGGAGGC 59.036 52.381 0.00 0.00 37.49 4.70
1498 1516 3.932545 CTCATCCGTTGATAGAGGAGG 57.067 52.381 0.00 0.00 37.29 4.30
1499 1517 2.029470 GCCTCATCCGTTGATAGAGGAG 60.029 54.545 17.58 7.62 42.64 3.69
1500 1518 1.964223 GCCTCATCCGTTGATAGAGGA 59.036 52.381 17.58 0.00 42.64 3.71
1501 1519 1.336332 CGCCTCATCCGTTGATAGAGG 60.336 57.143 0.00 0.00 42.76 3.69
1502 1520 1.609072 TCGCCTCATCCGTTGATAGAG 59.391 52.381 0.00 0.00 32.72 2.43
1503 1521 1.609072 CTCGCCTCATCCGTTGATAGA 59.391 52.381 0.00 0.00 32.72 1.98
1504 1522 1.336332 CCTCGCCTCATCCGTTGATAG 60.336 57.143 0.00 0.00 32.72 2.08
1505 1523 0.673985 CCTCGCCTCATCCGTTGATA 59.326 55.000 0.00 0.00 32.72 2.15
1506 1524 1.043116 TCCTCGCCTCATCCGTTGAT 61.043 55.000 0.00 0.00 32.72 2.57
1507 1525 1.254975 TTCCTCGCCTCATCCGTTGA 61.255 55.000 0.00 0.00 0.00 3.18
1508 1526 0.391130 TTTCCTCGCCTCATCCGTTG 60.391 55.000 0.00 0.00 0.00 4.10
1509 1527 0.108138 CTTTCCTCGCCTCATCCGTT 60.108 55.000 0.00 0.00 0.00 4.44
1510 1528 1.517832 CTTTCCTCGCCTCATCCGT 59.482 57.895 0.00 0.00 0.00 4.69
1511 1529 1.227380 CCTTTCCTCGCCTCATCCG 60.227 63.158 0.00 0.00 0.00 4.18
1512 1530 0.462759 CACCTTTCCTCGCCTCATCC 60.463 60.000 0.00 0.00 0.00 3.51
1513 1531 0.250513 ACACCTTTCCTCGCCTCATC 59.749 55.000 0.00 0.00 0.00 2.92
1514 1532 0.250513 GACACCTTTCCTCGCCTCAT 59.749 55.000 0.00 0.00 0.00 2.90
1515 1533 1.118965 TGACACCTTTCCTCGCCTCA 61.119 55.000 0.00 0.00 0.00 3.86
1516 1534 0.250513 ATGACACCTTTCCTCGCCTC 59.749 55.000 0.00 0.00 0.00 4.70
1517 1535 0.036010 CATGACACCTTTCCTCGCCT 60.036 55.000 0.00 0.00 0.00 5.52
1518 1536 1.026718 CCATGACACCTTTCCTCGCC 61.027 60.000 0.00 0.00 0.00 5.54
1519 1537 0.321653 ACCATGACACCTTTCCTCGC 60.322 55.000 0.00 0.00 0.00 5.03
1520 1538 1.442769 CACCATGACACCTTTCCTCG 58.557 55.000 0.00 0.00 0.00 4.63
1521 1539 1.826385 CCACCATGACACCTTTCCTC 58.174 55.000 0.00 0.00 0.00 3.71
1522 1540 0.251341 GCCACCATGACACCTTTCCT 60.251 55.000 0.00 0.00 0.00 3.36
1523 1541 0.539438 TGCCACCATGACACCTTTCC 60.539 55.000 0.00 0.00 0.00 3.13
1524 1542 0.598065 GTGCCACCATGACACCTTTC 59.402 55.000 0.00 0.00 0.00 2.62
1525 1543 2.732289 GTGCCACCATGACACCTTT 58.268 52.632 0.00 0.00 0.00 3.11
1526 1544 4.500265 GTGCCACCATGACACCTT 57.500 55.556 0.00 0.00 0.00 3.50
1529 1547 1.577328 CTTCGGTGCCACCATGACAC 61.577 60.000 15.45 0.00 38.47 3.67
1530 1548 1.302431 CTTCGGTGCCACCATGACA 60.302 57.895 15.45 0.00 38.47 3.58
1531 1549 2.690778 GCTTCGGTGCCACCATGAC 61.691 63.158 15.45 0.00 38.47 3.06
1532 1550 2.359850 GCTTCGGTGCCACCATGA 60.360 61.111 15.45 0.43 38.47 3.07
1540 1558 1.578206 GAAGGAACAGGCTTCGGTGC 61.578 60.000 0.00 0.00 0.00 5.01
1541 1559 0.955919 GGAAGGAACAGGCTTCGGTG 60.956 60.000 0.00 0.00 0.00 4.94
1542 1560 1.375326 GGAAGGAACAGGCTTCGGT 59.625 57.895 0.00 0.00 0.00 4.69
1543 1561 1.741770 CGGAAGGAACAGGCTTCGG 60.742 63.158 0.00 0.00 0.00 4.30
1544 1562 3.876300 CGGAAGGAACAGGCTTCG 58.124 61.111 0.00 0.00 0.00 3.79
1607 1625 3.411517 CCGTTGATGGAGGGGGCT 61.412 66.667 0.00 0.00 0.00 5.19
1726 1942 1.524961 GTGGGGCATGACATCGGTA 59.475 57.895 0.00 0.00 0.00 4.02
1768 1984 1.528824 CCATGACATCGCCTTCCCT 59.471 57.895 0.00 0.00 0.00 4.20
1817 2033 6.516693 CGCTAGAGTGGGTTGATTATGTATGA 60.517 42.308 0.00 0.00 0.00 2.15
1830 2046 2.583441 TTGCAGCGCTAGAGTGGGT 61.583 57.895 10.99 0.00 0.00 4.51
1902 2118 0.606401 ACATGTTGTCGCCTTCCCTG 60.606 55.000 0.00 0.00 0.00 4.45
1977 2193 4.035102 GGAGGAGCCGGTGCCTTT 62.035 66.667 16.80 0.00 38.69 3.11
2020 2236 1.598882 TGTAAAAGGCGCATGTGTCA 58.401 45.000 14.25 0.00 0.00 3.58
2081 2297 2.543653 GCCCATTATTCAATCGGTGCAC 60.544 50.000 8.80 8.80 0.00 4.57
2133 2349 0.861837 GCGAAATGGAGTGCCGATAG 59.138 55.000 0.00 0.00 36.79 2.08
2261 2489 6.594159 TCACAAAAATAAAACGGGCTCAAAAA 59.406 30.769 0.00 0.00 0.00 1.94
2262 2490 6.106673 TCACAAAAATAAAACGGGCTCAAAA 58.893 32.000 0.00 0.00 0.00 2.44
2263 2491 5.661458 TCACAAAAATAAAACGGGCTCAAA 58.339 33.333 0.00 0.00 0.00 2.69
2265 2493 4.261825 CCTCACAAAAATAAAACGGGCTCA 60.262 41.667 0.00 0.00 0.00 4.26
2267 2495 3.892588 TCCTCACAAAAATAAAACGGGCT 59.107 39.130 0.00 0.00 0.00 5.19
2268 2496 4.245845 TCCTCACAAAAATAAAACGGGC 57.754 40.909 0.00 0.00 0.00 6.13
2269 2497 6.220201 ACAATCCTCACAAAAATAAAACGGG 58.780 36.000 0.00 0.00 0.00 5.28
2270 2498 8.079809 AGTACAATCCTCACAAAAATAAAACGG 58.920 33.333 0.00 0.00 0.00 4.44
2297 2528 8.124199 CGCCCAAAACGTTGTTACTATTATTAT 58.876 33.333 0.00 0.00 32.40 1.28
2298 2529 7.118971 ACGCCCAAAACGTTGTTACTATTATTA 59.881 33.333 0.00 0.00 41.93 0.98
2299 2530 6.072563 ACGCCCAAAACGTTGTTACTATTATT 60.073 34.615 0.00 0.00 41.93 1.40
2300 2531 5.412286 ACGCCCAAAACGTTGTTACTATTAT 59.588 36.000 0.00 0.00 41.93 1.28
2306 2539 1.063764 TGACGCCCAAAACGTTGTTAC 59.936 47.619 0.00 0.00 45.24 2.50
2307 2540 1.376543 TGACGCCCAAAACGTTGTTA 58.623 45.000 0.00 0.00 45.24 2.41
2328 2561 0.391263 AACTCGAGAATGGGCCGTTC 60.391 55.000 27.54 27.54 0.00 3.95
2331 2564 2.464459 GCAACTCGAGAATGGGCCG 61.464 63.158 21.68 0.00 0.00 6.13
2451 2689 3.210012 TTTGGCTGGAGAGGGGTGC 62.210 63.158 0.00 0.00 0.00 5.01
2692 2930 3.213402 GAGGACGAGGCGGAGGAG 61.213 72.222 0.00 0.00 0.00 3.69
2749 2987 1.139095 GGTGTACGAGAAGGCGAGG 59.861 63.158 0.00 0.00 34.83 4.63
2793 3031 1.552578 AACATAAGGGCCGGAAAACC 58.447 50.000 5.05 0.20 0.00 3.27
2822 3060 0.596082 AACAGCATTTACGGCCACAC 59.404 50.000 2.24 0.00 0.00 3.82
2840 3078 8.740906 TCCAAACTGAAACTGTGTGTAAATAAA 58.259 29.630 0.00 0.00 0.00 1.40
2849 3087 1.400494 GCGTCCAAACTGAAACTGTGT 59.600 47.619 0.00 0.00 0.00 3.72
2868 3106 1.151668 AGCATTTGTGACACTCGAGC 58.848 50.000 13.61 6.37 0.00 5.03
2912 3150 6.071221 TGCAGCTTGTCCAATTCAAGAATATT 60.071 34.615 9.03 0.00 43.17 1.28
2914 3152 4.766373 TGCAGCTTGTCCAATTCAAGAATA 59.234 37.500 9.03 0.00 43.17 1.75
2924 3163 4.951715 AGAATGAATATGCAGCTTGTCCAA 59.048 37.500 0.00 0.00 0.00 3.53
2980 3223 2.610438 AAATGATGTGCCCCTCAGTT 57.390 45.000 0.00 0.00 0.00 3.16
2981 3224 3.559069 CATAAATGATGTGCCCCTCAGT 58.441 45.455 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.