Multiple sequence alignment - TraesCS5D01G480100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G480100 chr5D 100.000 3281 0 0 1 3281 517763135 517759855 0.000000e+00 6059.0
1 TraesCS5D01G480100 chr5A 90.216 1390 62 38 39 1392 645137382 645136031 0.000000e+00 1746.0
2 TraesCS5D01G480100 chr5A 88.584 692 58 13 2043 2726 645135136 645134458 0.000000e+00 821.0
3 TraesCS5D01G480100 chr5A 84.941 425 44 15 2737 3144 645134095 645133674 2.360000e-111 412.0
4 TraesCS5D01G480100 chr5B 84.049 978 70 25 634 1568 650348518 650347584 0.000000e+00 863.0
5 TraesCS5D01G480100 chr5B 81.132 1113 136 46 1777 2860 650346885 650345818 0.000000e+00 824.0
6 TraesCS5D01G480100 chr5B 88.393 448 37 11 129 572 650349680 650349244 2.900000e-145 525.0
7 TraesCS5D01G480100 chr5B 80.290 345 39 14 2858 3181 650345715 650345379 1.970000e-57 233.0
8 TraesCS5D01G480100 chr5B 96.364 55 2 0 3202 3256 650345278 650345224 1.250000e-14 91.6
9 TraesCS5D01G480100 chr6B 84.699 366 38 6 2906 3256 7598085 7598447 1.870000e-92 350.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G480100 chr5D 517759855 517763135 3280 True 6059.00 6059 100.000000 1 3281 1 chr5D.!!$R1 3280
1 TraesCS5D01G480100 chr5A 645133674 645137382 3708 True 993.00 1746 87.913667 39 3144 3 chr5A.!!$R1 3105
2 TraesCS5D01G480100 chr5B 650345224 650349680 4456 True 507.32 863 86.045600 129 3256 5 chr5B.!!$R1 3127

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
33 34 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.0 0.0 0.0 0.00 3.82 F
1194 1890 0.456312 CGTTCGCCGAGTAAGAAGCT 60.456 55.0 0.0 0.0 39.56 3.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1577 2333 0.036952 AGTGATCAAGCAGTCCGGTG 60.037 55.0 0.0 0.0 0.00 4.94 R
2675 4189 0.107116 TTGTGCCACTAAACCACGGT 60.107 50.0 0.0 0.0 32.32 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.962412 GTGTGTGTGTGTGTTGTGTG 58.038 50.000 0.00 0.00 0.00 3.82
20 21 1.265635 GTGTGTGTGTGTGTTGTGTGT 59.734 47.619 0.00 0.00 0.00 3.72
21 22 1.265365 TGTGTGTGTGTGTTGTGTGTG 59.735 47.619 0.00 0.00 0.00 3.82
22 23 1.265635 GTGTGTGTGTGTTGTGTGTGT 59.734 47.619 0.00 0.00 0.00 3.72
23 24 1.265365 TGTGTGTGTGTTGTGTGTGTG 59.735 47.619 0.00 0.00 0.00 3.82
24 25 1.265635 GTGTGTGTGTTGTGTGTGTGT 59.734 47.619 0.00 0.00 0.00 3.72
25 26 1.265365 TGTGTGTGTTGTGTGTGTGTG 59.735 47.619 0.00 0.00 0.00 3.82
26 27 1.265635 GTGTGTGTTGTGTGTGTGTGT 59.734 47.619 0.00 0.00 0.00 3.72
27 28 1.265365 TGTGTGTTGTGTGTGTGTGTG 59.735 47.619 0.00 0.00 0.00 3.82
28 29 1.265635 GTGTGTTGTGTGTGTGTGTGT 59.734 47.619 0.00 0.00 0.00 3.72
29 30 1.265365 TGTGTTGTGTGTGTGTGTGTG 59.735 47.619 0.00 0.00 0.00 3.82
30 31 1.265635 GTGTTGTGTGTGTGTGTGTGT 59.734 47.619 0.00 0.00 0.00 3.72
31 32 1.265365 TGTTGTGTGTGTGTGTGTGTG 59.735 47.619 0.00 0.00 0.00 3.82
32 33 1.265635 GTTGTGTGTGTGTGTGTGTGT 59.734 47.619 0.00 0.00 0.00 3.72
33 34 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
34 35 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
35 36 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
36 37 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
37 38 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
88 89 2.098116 GCGTGTGTGCGTGTTTATTTTG 60.098 45.455 0.00 0.00 0.00 2.44
313 894 2.171027 TCCAAAACACCCAACTCTACGT 59.829 45.455 0.00 0.00 0.00 3.57
475 1061 6.015180 TGTTGCAGGAATCTTGCTAAAAGAAT 60.015 34.615 18.00 0.00 0.00 2.40
732 1403 1.202915 TGATGGTGTGACATGGTTGCT 60.203 47.619 0.00 0.00 0.00 3.91
742 1413 5.106869 TGTGACATGGTTGCTCGTAATTTAC 60.107 40.000 0.00 0.00 0.00 2.01
743 1414 4.998033 TGACATGGTTGCTCGTAATTTACA 59.002 37.500 7.31 0.00 0.00 2.41
775 1457 2.698803 TGACTTCATGGTTGGATGTCG 58.301 47.619 0.00 0.00 40.42 4.35
802 1486 5.987019 AAAATAGGCAGTGGGTTATAGGA 57.013 39.130 0.00 0.00 0.00 2.94
803 1487 5.568620 AAATAGGCAGTGGGTTATAGGAG 57.431 43.478 0.00 0.00 0.00 3.69
814 1498 9.398538 CAGTGGGTTATAGGAGTAGTATCTATC 57.601 40.741 0.00 0.00 0.00 2.08
844 1528 1.450312 GATTCTGTGGACGGGCCTG 60.450 63.158 11.02 11.02 37.63 4.85
845 1529 2.876368 GATTCTGTGGACGGGCCTGG 62.876 65.000 18.00 4.46 37.63 4.45
910 1606 3.119352 ACCCTAACCACGAATACGAGAAC 60.119 47.826 0.00 0.00 42.66 3.01
911 1607 3.103738 CCTAACCACGAATACGAGAACG 58.896 50.000 0.00 0.00 42.66 3.95
912 1608 2.995466 AACCACGAATACGAGAACGA 57.005 45.000 0.00 0.00 42.66 3.85
913 1609 2.539346 ACCACGAATACGAGAACGAG 57.461 50.000 0.00 0.00 42.66 4.18
914 1610 1.131883 ACCACGAATACGAGAACGAGG 59.868 52.381 0.00 0.00 42.66 4.63
915 1611 1.399440 CCACGAATACGAGAACGAGGA 59.601 52.381 0.00 0.00 42.66 3.71
916 1612 2.438583 CACGAATACGAGAACGAGGAC 58.561 52.381 0.00 0.00 42.66 3.85
989 1685 3.031013 GGAGGAAGAGGAAGAGGAAGAG 58.969 54.545 0.00 0.00 0.00 2.85
990 1686 3.031013 GAGGAAGAGGAAGAGGAAGAGG 58.969 54.545 0.00 0.00 0.00 3.69
991 1687 2.657459 AGGAAGAGGAAGAGGAAGAGGA 59.343 50.000 0.00 0.00 0.00 3.71
992 1688 3.078305 AGGAAGAGGAAGAGGAAGAGGAA 59.922 47.826 0.00 0.00 0.00 3.36
993 1689 3.450817 GGAAGAGGAAGAGGAAGAGGAAG 59.549 52.174 0.00 0.00 0.00 3.46
994 1690 4.349365 GAAGAGGAAGAGGAAGAGGAAGA 58.651 47.826 0.00 0.00 0.00 2.87
1193 1889 1.989163 CGTTCGCCGAGTAAGAAGC 59.011 57.895 0.00 0.00 39.56 3.86
1194 1890 0.456312 CGTTCGCCGAGTAAGAAGCT 60.456 55.000 0.00 0.00 39.56 3.74
1195 1891 1.270068 GTTCGCCGAGTAAGAAGCTC 58.730 55.000 0.00 0.00 0.00 4.09
1197 1893 1.174783 TCGCCGAGTAAGAAGCTCTT 58.825 50.000 0.00 0.00 40.35 2.85
1198 1894 1.544691 TCGCCGAGTAAGAAGCTCTTT 59.455 47.619 4.15 0.00 37.89 2.52
1199 1895 2.029290 TCGCCGAGTAAGAAGCTCTTTT 60.029 45.455 4.15 0.00 37.89 2.27
1200 1896 2.737252 CGCCGAGTAAGAAGCTCTTTTT 59.263 45.455 4.15 0.00 37.89 1.94
1201 1897 3.924686 CGCCGAGTAAGAAGCTCTTTTTA 59.075 43.478 4.15 0.00 37.89 1.52
1202 1898 4.387862 CGCCGAGTAAGAAGCTCTTTTTAA 59.612 41.667 4.15 0.00 37.89 1.52
1204 1900 5.408909 GCCGAGTAAGAAGCTCTTTTTAACT 59.591 40.000 4.15 2.53 37.89 2.24
1206 1902 6.869388 CCGAGTAAGAAGCTCTTTTTAACTCT 59.131 38.462 16.16 0.98 37.89 3.24
1236 1976 2.497770 GCGCGGGCTAGGTTCTAA 59.502 61.111 18.33 0.00 35.83 2.10
1237 1977 1.153509 GCGCGGGCTAGGTTCTAAA 60.154 57.895 18.33 0.00 35.83 1.85
1238 1978 0.741927 GCGCGGGCTAGGTTCTAAAA 60.742 55.000 18.33 0.00 35.83 1.52
1239 1979 1.287425 CGCGGGCTAGGTTCTAAAAG 58.713 55.000 0.00 0.00 0.00 2.27
1240 1980 1.015109 GCGGGCTAGGTTCTAAAAGC 58.985 55.000 0.00 0.00 0.00 3.51
1241 1981 1.677820 GCGGGCTAGGTTCTAAAAGCA 60.678 52.381 0.00 0.00 36.68 3.91
1242 1982 2.919228 CGGGCTAGGTTCTAAAAGCAT 58.081 47.619 0.00 0.00 36.68 3.79
1243 1983 2.872858 CGGGCTAGGTTCTAAAAGCATC 59.127 50.000 0.00 0.00 36.68 3.91
1244 1984 3.215151 GGGCTAGGTTCTAAAAGCATCC 58.785 50.000 0.00 0.00 36.68 3.51
1245 1985 3.371595 GGGCTAGGTTCTAAAAGCATCCA 60.372 47.826 0.00 0.00 36.68 3.41
1246 1986 3.628032 GGCTAGGTTCTAAAAGCATCCAC 59.372 47.826 0.00 0.00 36.68 4.02
1247 1987 3.309954 GCTAGGTTCTAAAAGCATCCACG 59.690 47.826 0.00 0.00 35.29 4.94
1248 1988 3.695830 AGGTTCTAAAAGCATCCACGA 57.304 42.857 0.00 0.00 35.29 4.35
1249 1989 3.600388 AGGTTCTAAAAGCATCCACGAG 58.400 45.455 0.00 0.00 35.29 4.18
1250 1990 3.260884 AGGTTCTAAAAGCATCCACGAGA 59.739 43.478 0.00 0.00 35.29 4.04
1251 1991 4.080863 AGGTTCTAAAAGCATCCACGAGAT 60.081 41.667 0.00 0.00 35.29 2.75
1252 1992 4.636206 GGTTCTAAAAGCATCCACGAGATT 59.364 41.667 0.00 0.00 30.59 2.40
1253 1993 5.447818 GGTTCTAAAAGCATCCACGAGATTG 60.448 44.000 0.00 0.00 30.59 2.67
1254 1994 4.191544 TCTAAAAGCATCCACGAGATTGG 58.808 43.478 0.00 0.00 38.10 3.16
1255 1995 2.496899 AAAGCATCCACGAGATTGGT 57.503 45.000 0.00 0.00 37.93 3.67
1260 2000 2.436417 CATCCACGAGATTGGTTGGTT 58.564 47.619 0.00 0.00 37.93 3.67
1268 2008 2.225727 GAGATTGGTTGGTTTGGTCGTC 59.774 50.000 0.00 0.00 0.00 4.20
1331 2074 4.882427 AGCCAGTGATGAGATTGAATCTTG 59.118 41.667 9.35 2.46 40.38 3.02
1397 2150 4.586841 CCAAGTGAACAATTTTGGGACCTA 59.413 41.667 0.00 0.00 37.11 3.08
1398 2151 5.245977 CCAAGTGAACAATTTTGGGACCTAT 59.754 40.000 0.00 0.00 37.11 2.57
1399 2152 6.389906 CAAGTGAACAATTTTGGGACCTATC 58.610 40.000 0.00 0.00 0.00 2.08
1400 2153 5.892348 AGTGAACAATTTTGGGACCTATCT 58.108 37.500 0.00 0.00 0.00 1.98
1401 2154 5.946377 AGTGAACAATTTTGGGACCTATCTC 59.054 40.000 0.00 0.00 0.00 2.75
1402 2155 5.710099 GTGAACAATTTTGGGACCTATCTCA 59.290 40.000 0.00 0.00 31.55 3.27
1406 2159 5.658190 ACAATTTTGGGACCTATCTCATTGG 59.342 40.000 0.00 0.00 34.40 3.16
1433 2186 2.555664 ACCTGACATCTGGATCCAAGT 58.444 47.619 17.00 14.40 38.22 3.16
1509 2262 5.552178 ACACTAGAAAAATGACTGACCTCC 58.448 41.667 0.00 0.00 0.00 4.30
1546 2302 0.967380 AGCCCAAAAATGAGCTCGGG 60.967 55.000 15.67 15.67 36.71 5.14
1568 2324 1.188863 ATGGTTTCAGCTTGGATGGC 58.811 50.000 0.00 0.00 0.00 4.40
1570 2326 1.188863 GGTTTCAGCTTGGATGGCAT 58.811 50.000 0.00 0.00 0.00 4.40
1572 2328 1.547372 GTTTCAGCTTGGATGGCATGT 59.453 47.619 3.81 0.00 0.00 3.21
1573 2329 1.179152 TTCAGCTTGGATGGCATGTG 58.821 50.000 3.81 0.00 0.00 3.21
1575 2331 1.064240 TCAGCTTGGATGGCATGTGAT 60.064 47.619 3.81 0.00 0.00 3.06
1577 2333 0.672342 GCTTGGATGGCATGTGATCC 59.328 55.000 3.81 14.93 38.98 3.36
1578 2334 2.025344 GCTTGGATGGCATGTGATCCA 61.025 52.381 18.72 18.72 45.27 3.41
1579 2335 1.679680 CTTGGATGGCATGTGATCCAC 59.320 52.381 21.11 4.88 46.33 4.02
1580 2336 0.106569 TGGATGGCATGTGATCCACC 60.107 55.000 18.72 10.78 42.67 4.61
1581 2337 1.168407 GGATGGCATGTGATCCACCG 61.168 60.000 3.81 0.00 38.46 4.94
1582 2338 1.152902 ATGGCATGTGATCCACCGG 60.153 57.895 0.00 0.00 34.81 5.28
1583 2339 1.634865 ATGGCATGTGATCCACCGGA 61.635 55.000 9.46 0.00 34.81 5.14
1584 2340 1.819632 GGCATGTGATCCACCGGAC 60.820 63.158 9.46 0.00 32.98 4.79
1585 2341 1.221840 GCATGTGATCCACCGGACT 59.778 57.895 9.46 0.00 32.98 3.85
1586 2342 1.091771 GCATGTGATCCACCGGACTG 61.092 60.000 9.46 0.00 32.98 3.51
1587 2343 1.091771 CATGTGATCCACCGGACTGC 61.092 60.000 9.46 0.00 32.98 4.40
1588 2344 1.267574 ATGTGATCCACCGGACTGCT 61.268 55.000 9.46 0.00 32.98 4.24
1589 2345 1.296715 GTGATCCACCGGACTGCTT 59.703 57.895 9.46 0.00 32.98 3.91
1590 2346 1.021390 GTGATCCACCGGACTGCTTG 61.021 60.000 9.46 0.00 32.98 4.01
1591 2347 1.191489 TGATCCACCGGACTGCTTGA 61.191 55.000 9.46 0.00 32.98 3.02
1592 2348 0.179000 GATCCACCGGACTGCTTGAT 59.821 55.000 9.46 0.00 32.98 2.57
1593 2349 0.179000 ATCCACCGGACTGCTTGATC 59.821 55.000 9.46 0.00 32.98 2.92
1594 2350 1.191489 TCCACCGGACTGCTTGATCA 61.191 55.000 9.46 0.00 0.00 2.92
1595 2351 1.021390 CCACCGGACTGCTTGATCAC 61.021 60.000 9.46 0.00 0.00 3.06
1596 2352 0.036952 CACCGGACTGCTTGATCACT 60.037 55.000 9.46 0.00 0.00 3.41
1597 2353 0.687354 ACCGGACTGCTTGATCACTT 59.313 50.000 9.46 0.00 0.00 3.16
1598 2354 1.081892 CCGGACTGCTTGATCACTTG 58.918 55.000 0.00 0.00 0.00 3.16
1599 2355 0.445436 CGGACTGCTTGATCACTTGC 59.555 55.000 0.00 0.90 0.00 4.01
1600 2356 1.818642 GGACTGCTTGATCACTTGCT 58.181 50.000 13.41 0.00 0.00 3.91
1601 2357 2.675032 CGGACTGCTTGATCACTTGCTA 60.675 50.000 13.41 2.94 0.00 3.49
1602 2358 2.935201 GGACTGCTTGATCACTTGCTAG 59.065 50.000 13.41 11.43 0.00 3.42
1603 2359 2.935201 GACTGCTTGATCACTTGCTAGG 59.065 50.000 13.41 7.91 0.00 3.02
1604 2360 1.669779 CTGCTTGATCACTTGCTAGGC 59.330 52.381 13.41 0.00 0.00 3.93
1605 2361 1.280133 TGCTTGATCACTTGCTAGGCT 59.720 47.619 13.41 0.00 0.00 4.58
1606 2362 1.669779 GCTTGATCACTTGCTAGGCTG 59.330 52.381 0.00 0.00 0.00 4.85
1607 2363 1.669779 CTTGATCACTTGCTAGGCTGC 59.330 52.381 0.00 0.00 0.00 5.25
1608 2364 0.907486 TGATCACTTGCTAGGCTGCT 59.093 50.000 0.00 0.00 0.00 4.24
1609 2365 1.134580 TGATCACTTGCTAGGCTGCTC 60.135 52.381 0.00 0.00 0.00 4.26
1610 2366 0.179936 ATCACTTGCTAGGCTGCTCC 59.820 55.000 0.00 0.00 0.00 4.70
1612 2368 0.826715 CACTTGCTAGGCTGCTCCTA 59.173 55.000 0.00 5.42 45.41 2.94
1613 2369 0.827368 ACTTGCTAGGCTGCTCCTAC 59.173 55.000 0.00 1.58 45.41 3.18
1614 2370 0.105778 CTTGCTAGGCTGCTCCTACC 59.894 60.000 0.00 0.00 45.41 3.18
1615 2371 1.338136 TTGCTAGGCTGCTCCTACCC 61.338 60.000 0.00 0.00 45.41 3.69
1616 2372 1.458588 GCTAGGCTGCTCCTACCCT 60.459 63.158 0.00 0.00 45.41 4.34
1617 2373 1.753368 GCTAGGCTGCTCCTACCCTG 61.753 65.000 0.00 0.00 45.41 4.45
1618 2374 0.105964 CTAGGCTGCTCCTACCCTGA 60.106 60.000 0.00 0.00 45.41 3.86
1619 2375 0.105964 TAGGCTGCTCCTACCCTGAG 60.106 60.000 0.00 0.00 45.41 3.35
1620 2376 1.687493 GGCTGCTCCTACCCTGAGT 60.687 63.158 0.00 0.00 32.31 3.41
1621 2377 0.397254 GGCTGCTCCTACCCTGAGTA 60.397 60.000 0.00 0.00 32.31 2.59
1622 2378 1.710816 GCTGCTCCTACCCTGAGTAT 58.289 55.000 0.00 0.00 32.31 2.12
1623 2379 2.043227 GCTGCTCCTACCCTGAGTATT 58.957 52.381 0.00 0.00 32.31 1.89
1624 2380 2.436173 GCTGCTCCTACCCTGAGTATTT 59.564 50.000 0.00 0.00 32.31 1.40
1625 2381 3.118223 GCTGCTCCTACCCTGAGTATTTT 60.118 47.826 0.00 0.00 32.31 1.82
1626 2382 4.626529 GCTGCTCCTACCCTGAGTATTTTT 60.627 45.833 0.00 0.00 32.31 1.94
1627 2383 5.396436 GCTGCTCCTACCCTGAGTATTTTTA 60.396 44.000 0.00 0.00 32.31 1.52
1628 2384 6.630203 TGCTCCTACCCTGAGTATTTTTAA 57.370 37.500 0.00 0.00 32.31 1.52
1629 2385 6.650120 TGCTCCTACCCTGAGTATTTTTAAG 58.350 40.000 0.00 0.00 32.31 1.85
1630 2386 6.442564 TGCTCCTACCCTGAGTATTTTTAAGA 59.557 38.462 0.00 0.00 32.31 2.10
1631 2387 7.037873 TGCTCCTACCCTGAGTATTTTTAAGAA 60.038 37.037 0.00 0.00 32.31 2.52
1632 2388 7.496263 GCTCCTACCCTGAGTATTTTTAAGAAG 59.504 40.741 0.00 0.00 32.31 2.85
1633 2389 7.336396 TCCTACCCTGAGTATTTTTAAGAAGC 58.664 38.462 0.00 0.00 0.00 3.86
1634 2390 7.182206 TCCTACCCTGAGTATTTTTAAGAAGCT 59.818 37.037 0.00 0.00 0.00 3.74
1635 2391 8.483758 CCTACCCTGAGTATTTTTAAGAAGCTA 58.516 37.037 0.00 0.00 0.00 3.32
1637 2393 8.738645 ACCCTGAGTATTTTTAAGAAGCTATG 57.261 34.615 0.00 0.00 0.00 2.23
1638 2394 7.775561 ACCCTGAGTATTTTTAAGAAGCTATGG 59.224 37.037 0.00 0.00 0.00 2.74
1639 2395 7.229506 CCCTGAGTATTTTTAAGAAGCTATGGG 59.770 40.741 0.00 0.00 0.00 4.00
1640 2396 7.255277 CCTGAGTATTTTTAAGAAGCTATGGGC 60.255 40.741 0.00 0.00 42.19 5.36
1641 2397 7.116075 TGAGTATTTTTAAGAAGCTATGGGCA 58.884 34.615 0.00 0.00 44.79 5.36
1642 2398 7.779798 TGAGTATTTTTAAGAAGCTATGGGCAT 59.220 33.333 0.00 0.00 44.79 4.40
1643 2399 8.171164 AGTATTTTTAAGAAGCTATGGGCATC 57.829 34.615 0.00 0.00 44.79 3.91
1644 2400 7.779798 AGTATTTTTAAGAAGCTATGGGCATCA 59.220 33.333 0.00 0.00 44.79 3.07
1645 2401 5.835113 TTTTAAGAAGCTATGGGCATCAC 57.165 39.130 0.00 0.00 44.79 3.06
1646 2402 4.778213 TTAAGAAGCTATGGGCATCACT 57.222 40.909 0.00 0.00 44.79 3.41
1647 2403 3.659183 AAGAAGCTATGGGCATCACTT 57.341 42.857 0.00 0.00 44.79 3.16
1648 2404 3.205784 AGAAGCTATGGGCATCACTTC 57.794 47.619 0.00 0.00 44.79 3.01
1649 2405 2.507058 AGAAGCTATGGGCATCACTTCA 59.493 45.455 2.54 0.00 44.79 3.02
1650 2406 3.054139 AGAAGCTATGGGCATCACTTCAA 60.054 43.478 2.54 0.00 44.79 2.69
1651 2407 3.589951 AGCTATGGGCATCACTTCAAT 57.410 42.857 0.00 0.00 44.79 2.57
1652 2408 3.484407 AGCTATGGGCATCACTTCAATC 58.516 45.455 0.00 0.00 44.79 2.67
1653 2409 3.137913 AGCTATGGGCATCACTTCAATCT 59.862 43.478 0.00 0.00 44.79 2.40
1654 2410 3.501445 GCTATGGGCATCACTTCAATCTC 59.499 47.826 0.00 0.00 41.35 2.75
1655 2411 2.425143 TGGGCATCACTTCAATCTCC 57.575 50.000 0.00 0.00 0.00 3.71
1656 2412 1.918262 TGGGCATCACTTCAATCTCCT 59.082 47.619 0.00 0.00 0.00 3.69
1657 2413 2.309755 TGGGCATCACTTCAATCTCCTT 59.690 45.455 0.00 0.00 0.00 3.36
1658 2414 2.686915 GGGCATCACTTCAATCTCCTTG 59.313 50.000 0.00 0.00 36.09 3.61
1659 2415 2.686915 GGCATCACTTCAATCTCCTTGG 59.313 50.000 0.00 0.00 35.43 3.61
1660 2416 3.350833 GCATCACTTCAATCTCCTTGGT 58.649 45.455 0.00 0.00 35.43 3.67
1661 2417 3.760684 GCATCACTTCAATCTCCTTGGTT 59.239 43.478 0.00 0.00 35.43 3.67
1662 2418 4.219288 GCATCACTTCAATCTCCTTGGTTT 59.781 41.667 0.00 0.00 35.43 3.27
1663 2419 5.706916 CATCACTTCAATCTCCTTGGTTTG 58.293 41.667 0.00 0.00 35.43 2.93
1664 2420 4.792068 TCACTTCAATCTCCTTGGTTTGT 58.208 39.130 0.00 0.00 35.43 2.83
1665 2421 4.821805 TCACTTCAATCTCCTTGGTTTGTC 59.178 41.667 0.00 0.00 35.43 3.18
1666 2422 4.580167 CACTTCAATCTCCTTGGTTTGTCA 59.420 41.667 0.00 0.00 35.43 3.58
1667 2423 5.067674 CACTTCAATCTCCTTGGTTTGTCAA 59.932 40.000 0.00 0.00 35.43 3.18
1668 2424 5.300286 ACTTCAATCTCCTTGGTTTGTCAAG 59.700 40.000 0.00 0.00 42.63 3.02
1669 2425 4.792068 TCAATCTCCTTGGTTTGTCAAGT 58.208 39.130 0.00 0.00 41.72 3.16
1670 2426 5.200483 TCAATCTCCTTGGTTTGTCAAGTT 58.800 37.500 0.00 0.00 41.72 2.66
1671 2427 5.067674 TCAATCTCCTTGGTTTGTCAAGTTG 59.932 40.000 0.00 0.00 41.72 3.16
1672 2428 2.687935 TCTCCTTGGTTTGTCAAGTTGC 59.312 45.455 0.00 0.00 41.72 4.17
1673 2429 2.689983 CTCCTTGGTTTGTCAAGTTGCT 59.310 45.455 0.00 0.00 41.72 3.91
1674 2430 2.426738 TCCTTGGTTTGTCAAGTTGCTG 59.573 45.455 0.00 0.00 41.72 4.41
1675 2431 2.166254 CCTTGGTTTGTCAAGTTGCTGT 59.834 45.455 0.00 0.00 41.72 4.40
1676 2432 3.368323 CCTTGGTTTGTCAAGTTGCTGTT 60.368 43.478 0.00 0.00 41.72 3.16
1677 2433 3.229276 TGGTTTGTCAAGTTGCTGTTG 57.771 42.857 0.00 0.00 0.00 3.33
1678 2434 2.822561 TGGTTTGTCAAGTTGCTGTTGA 59.177 40.909 0.00 0.00 0.00 3.18
1679 2435 3.256879 TGGTTTGTCAAGTTGCTGTTGAA 59.743 39.130 0.00 0.00 35.71 2.69
1680 2436 4.241681 GGTTTGTCAAGTTGCTGTTGAAA 58.758 39.130 0.00 0.00 35.71 2.69
1681 2437 4.091365 GGTTTGTCAAGTTGCTGTTGAAAC 59.909 41.667 0.00 0.00 35.71 2.78
1682 2438 4.782019 TTGTCAAGTTGCTGTTGAAACT 57.218 36.364 0.00 0.00 43.65 2.66
1684 2440 5.132897 TGTCAAGTTGCTGTTGAAACTTT 57.867 34.783 0.00 0.00 46.91 2.66
1685 2441 5.537188 TGTCAAGTTGCTGTTGAAACTTTT 58.463 33.333 0.00 0.00 46.91 2.27
1686 2442 5.633182 TGTCAAGTTGCTGTTGAAACTTTTC 59.367 36.000 0.00 0.00 46.91 2.29
1687 2443 4.856487 TCAAGTTGCTGTTGAAACTTTTCG 59.144 37.500 0.00 0.00 46.91 3.46
1688 2444 4.695217 AGTTGCTGTTGAAACTTTTCGA 57.305 36.364 0.00 0.00 38.91 3.71
1689 2445 5.054390 AGTTGCTGTTGAAACTTTTCGAA 57.946 34.783 0.00 0.00 38.91 3.71
1690 2446 4.857037 AGTTGCTGTTGAAACTTTTCGAAC 59.143 37.500 0.00 2.78 38.91 3.95
1691 2447 4.695217 TGCTGTTGAAACTTTTCGAACT 57.305 36.364 0.00 0.00 40.01 3.01
1692 2448 4.411327 TGCTGTTGAAACTTTTCGAACTG 58.589 39.130 0.00 13.38 40.01 3.16
1693 2449 4.155099 TGCTGTTGAAACTTTTCGAACTGA 59.845 37.500 0.00 0.00 40.01 3.41
1694 2450 5.163663 TGCTGTTGAAACTTTTCGAACTGAT 60.164 36.000 0.00 0.00 40.01 2.90
1695 2451 5.743872 GCTGTTGAAACTTTTCGAACTGATT 59.256 36.000 0.00 0.00 40.01 2.57
1696 2452 6.910433 GCTGTTGAAACTTTTCGAACTGATTA 59.090 34.615 0.00 0.00 40.01 1.75
1697 2453 7.591426 GCTGTTGAAACTTTTCGAACTGATTAT 59.409 33.333 0.00 0.00 40.01 1.28
1702 2458 9.483916 TGAAACTTTTCGAACTGATTATAGTGA 57.516 29.630 0.00 0.00 40.01 3.41
1706 2462 9.706691 ACTTTTCGAACTGATTATAGTGAAAGA 57.293 29.630 0.00 0.00 29.74 2.52
1708 2464 8.703604 TTTCGAACTGATTATAGTGAAAGAGG 57.296 34.615 0.00 0.00 0.00 3.69
1716 2472 8.792830 TGATTATAGTGAAAGAGGTTTTCCAG 57.207 34.615 0.00 0.00 43.73 3.86
1717 2473 8.383175 TGATTATAGTGAAAGAGGTTTTCCAGT 58.617 33.333 0.00 0.00 43.73 4.00
1718 2474 7.979444 TTATAGTGAAAGAGGTTTTCCAGTG 57.021 36.000 0.00 0.00 43.73 3.66
1724 2480 2.339769 AGAGGTTTTCCAGTGTAGCCT 58.660 47.619 0.00 0.00 43.73 4.58
1738 2494 4.081586 AGTGTAGCCTCTTACTGGTTAAGC 60.082 45.833 0.00 0.00 37.67 3.09
1739 2495 4.081586 GTGTAGCCTCTTACTGGTTAAGCT 60.082 45.833 6.19 0.00 37.67 3.74
1740 2496 5.126707 GTGTAGCCTCTTACTGGTTAAGCTA 59.873 44.000 6.19 0.00 37.67 3.32
1741 2497 4.739587 AGCCTCTTACTGGTTAAGCTAC 57.260 45.455 6.19 0.00 37.67 3.58
1742 2498 3.130693 AGCCTCTTACTGGTTAAGCTACG 59.869 47.826 6.19 0.00 37.67 3.51
1743 2499 3.445857 CCTCTTACTGGTTAAGCTACGC 58.554 50.000 6.19 0.00 37.67 4.42
1744 2500 3.445857 CTCTTACTGGTTAAGCTACGCC 58.554 50.000 6.19 0.00 37.67 5.68
1745 2501 3.094572 TCTTACTGGTTAAGCTACGCCT 58.905 45.455 6.19 0.00 37.67 5.52
1746 2502 2.953466 TACTGGTTAAGCTACGCCTG 57.047 50.000 6.19 0.00 0.00 4.85
1755 2511 5.446875 GGTTAAGCTACGCCTGTTGAATTAC 60.447 44.000 0.00 0.00 0.00 1.89
1757 2513 3.262420 AGCTACGCCTGTTGAATTACAG 58.738 45.455 1.91 1.91 44.07 2.74
1775 2532 1.760613 CAGGGCATCTCCATTTGCAAT 59.239 47.619 0.00 0.00 40.66 3.56
1783 2540 3.899734 TCTCCATTTGCAATTGTTCACG 58.100 40.909 17.53 4.85 0.00 4.35
1788 2545 5.009110 TCCATTTGCAATTGTTCACGAGTTA 59.991 36.000 17.53 0.00 0.00 2.24
1789 2546 5.116983 CCATTTGCAATTGTTCACGAGTTAC 59.883 40.000 17.53 0.00 0.00 2.50
1803 2560 4.272504 CACGAGTTACTGTTGTGAACCAAT 59.727 41.667 0.00 0.00 35.02 3.16
1804 2561 5.464057 CACGAGTTACTGTTGTGAACCAATA 59.536 40.000 0.00 0.00 35.02 1.90
1811 2568 8.876790 GTTACTGTTGTGAACCAATATACCTAC 58.123 37.037 0.00 0.00 35.02 3.18
1812 2569 7.011499 ACTGTTGTGAACCAATATACCTACA 57.989 36.000 0.00 0.00 35.02 2.74
1814 2571 8.764558 ACTGTTGTGAACCAATATACCTACATA 58.235 33.333 0.00 0.00 35.02 2.29
1817 2574 9.998106 GTTGTGAACCAATATACCTACATATCT 57.002 33.333 0.00 0.00 35.02 1.98
1854 2611 3.230134 TGTGGCCTTTGCTAAGTGATTT 58.770 40.909 3.32 0.00 37.74 2.17
1859 2616 4.866486 GGCCTTTGCTAAGTGATTTCAATG 59.134 41.667 7.14 0.00 37.74 2.82
1872 2629 9.715121 AAGTGATTTCAATGTTAAATGCATTCT 57.285 25.926 13.38 5.92 34.68 2.40
1901 2658 6.767902 CAGTTAGCATGGTTATTCCTGTGTAT 59.232 38.462 1.12 0.00 37.07 2.29
1909 2666 5.962031 TGGTTATTCCTGTGTATCTGTACCT 59.038 40.000 0.00 0.00 37.07 3.08
1910 2667 7.127405 TGGTTATTCCTGTGTATCTGTACCTA 58.873 38.462 0.00 0.00 37.07 3.08
1915 2672 5.632118 TCCTGTGTATCTGTACCTATCCTC 58.368 45.833 0.00 0.00 0.00 3.71
1918 2675 3.190953 GTGTATCTGTACCTATCCTCGGC 59.809 52.174 0.00 0.00 0.00 5.54
1921 2678 1.214673 TCTGTACCTATCCTCGGCTGT 59.785 52.381 0.00 0.00 0.00 4.40
1924 2681 2.954318 TGTACCTATCCTCGGCTGTTAC 59.046 50.000 0.00 0.00 0.00 2.50
1931 2688 6.552350 ACCTATCCTCGGCTGTTACTTTTATA 59.448 38.462 0.00 0.00 0.00 0.98
1932 2689 6.867293 CCTATCCTCGGCTGTTACTTTTATAC 59.133 42.308 0.00 0.00 0.00 1.47
1933 2690 5.927281 TCCTCGGCTGTTACTTTTATACT 57.073 39.130 0.00 0.00 0.00 2.12
1934 2691 5.657474 TCCTCGGCTGTTACTTTTATACTG 58.343 41.667 0.00 0.00 0.00 2.74
1935 2692 4.270325 CCTCGGCTGTTACTTTTATACTGC 59.730 45.833 0.00 0.00 36.41 4.40
1936 2693 4.823157 TCGGCTGTTACTTTTATACTGCA 58.177 39.130 0.00 0.00 38.15 4.41
1948 2705 8.279970 ACTTTTATACTGCACTGCATTTATCA 57.720 30.769 3.64 0.00 38.13 2.15
1952 2709 4.178545 ACTGCACTGCATTTATCAAACC 57.821 40.909 3.64 0.00 38.13 3.27
1953 2710 3.573538 ACTGCACTGCATTTATCAAACCA 59.426 39.130 3.64 0.00 38.13 3.67
1955 2712 4.305769 TGCACTGCATTTATCAAACCAAC 58.694 39.130 0.00 0.00 31.71 3.77
1980 2737 9.560860 ACTATATGGTATGATGATTAAGGTCCA 57.439 33.333 0.00 0.00 0.00 4.02
1983 2740 5.940617 TGGTATGATGATTAAGGTCCAAGG 58.059 41.667 0.00 0.00 0.00 3.61
1984 2741 5.669904 TGGTATGATGATTAAGGTCCAAGGA 59.330 40.000 0.00 0.00 0.00 3.36
1985 2742 6.183361 TGGTATGATGATTAAGGTCCAAGGAG 60.183 42.308 0.00 0.00 0.00 3.69
1986 2743 6.043243 GGTATGATGATTAAGGTCCAAGGAGA 59.957 42.308 0.00 0.00 0.00 3.71
1987 2744 5.620738 TGATGATTAAGGTCCAAGGAGAG 57.379 43.478 0.00 0.00 0.00 3.20
1988 2745 3.914426 TGATTAAGGTCCAAGGAGAGC 57.086 47.619 0.00 0.00 34.42 4.09
1989 2746 2.168521 TGATTAAGGTCCAAGGAGAGCG 59.831 50.000 0.00 0.00 39.27 5.03
1990 2747 1.933021 TTAAGGTCCAAGGAGAGCGA 58.067 50.000 0.00 0.00 39.27 4.93
1992 2749 1.056660 AAGGTCCAAGGAGAGCGAAA 58.943 50.000 0.00 0.00 39.27 3.46
1997 2777 1.691976 TCCAAGGAGAGCGAAACTTCA 59.308 47.619 0.00 0.00 0.00 3.02
2006 2786 3.938963 AGAGCGAAACTTCAGTCAAAACA 59.061 39.130 0.00 0.00 0.00 2.83
2007 2787 4.034510 AGAGCGAAACTTCAGTCAAAACAG 59.965 41.667 0.00 0.00 0.00 3.16
2028 2808 2.122413 AGCTGGGGTCACCACAGA 60.122 61.111 31.73 0.00 46.80 3.41
2054 2841 7.121315 ACTGCCTTTGCTAATAGTTTCTTTAGG 59.879 37.037 0.00 0.00 38.71 2.69
2071 3579 6.441274 TCTTTAGGGTGTAGAATAATACGCG 58.559 40.000 3.53 3.53 37.10 6.01
2090 3598 2.618053 CGATACGCTTCTCCTTTTGGT 58.382 47.619 0.00 0.00 41.38 3.67
2098 3606 4.079253 GCTTCTCCTTTTGGTTCCATGTA 58.921 43.478 0.00 0.00 41.38 2.29
2104 3612 5.640147 TCCTTTTGGTTCCATGTACTGAAT 58.360 37.500 0.00 0.00 41.38 2.57
2105 3613 6.074648 TCCTTTTGGTTCCATGTACTGAATT 58.925 36.000 0.00 0.00 41.38 2.17
2106 3614 6.208599 TCCTTTTGGTTCCATGTACTGAATTC 59.791 38.462 0.00 0.00 41.38 2.17
2209 3718 4.299796 GGGCTTCCAAGGTGGCCA 62.300 66.667 20.00 0.00 45.68 5.36
2211 3720 2.677875 GCTTCCAAGGTGGCCAGG 60.678 66.667 5.11 3.35 37.47 4.45
2229 3738 1.347707 AGGCAGGAGATGTCAACGAAA 59.652 47.619 0.00 0.00 35.29 3.46
2257 3766 3.774528 CGCTGGGTCTAGCTGCCA 61.775 66.667 0.00 0.00 41.51 4.92
2260 3769 1.910722 CTGGGTCTAGCTGCCATGT 59.089 57.895 0.00 0.00 0.00 3.21
2363 3872 9.462606 AGGAATTCCTGTAACGAAAATTAGAAT 57.537 29.630 26.52 0.00 46.55 2.40
2382 3891 8.851960 TTAGAATATAATCGTGTATCCGATGC 57.148 34.615 0.00 0.00 46.23 3.91
2441 3950 5.008712 TGGCATACACTATTACTCTGTCTCG 59.991 44.000 0.00 0.00 0.00 4.04
2478 3987 1.797025 ACAGAGCCGCTTTGACTTAC 58.203 50.000 17.32 0.00 0.00 2.34
2491 4000 0.827368 GACTTACCTCTCCTGGCCAG 59.173 60.000 26.87 26.87 0.00 4.85
2500 4009 2.750637 CCTGGCCAGCTTGCTGAG 60.751 66.667 28.39 7.14 0.00 3.35
2508 4017 2.703416 CCAGCTTGCTGAGTATGTTCA 58.297 47.619 22.50 0.00 0.00 3.18
2510 4020 3.311871 CCAGCTTGCTGAGTATGTTCATC 59.688 47.826 22.50 0.00 0.00 2.92
2511 4021 3.311871 CAGCTTGCTGAGTATGTTCATCC 59.688 47.826 16.78 0.00 0.00 3.51
2520 4030 6.480320 GCTGAGTATGTTCATCCTATTTTCGT 59.520 38.462 0.00 0.00 0.00 3.85
2566 4076 1.818060 GCCACCTGTATGTTGCATCAA 59.182 47.619 0.75 0.00 0.00 2.57
2582 4092 4.756642 TGCATCAAGAGTTACTGAAACCTG 59.243 41.667 0.00 0.00 39.03 4.00
2589 4099 5.612351 AGAGTTACTGAAACCTGAAGAACC 58.388 41.667 0.00 0.00 39.03 3.62
2606 4116 3.450457 AGAACCTGCAGATAAGAGGACTG 59.550 47.826 17.39 0.00 35.14 3.51
2613 4123 3.681897 GCAGATAAGAGGACTGTGTTGTG 59.318 47.826 0.00 0.00 34.60 3.33
2634 4148 6.820335 TGTGTCTCTCTCTTTCAAATCAAGA 58.180 36.000 0.00 0.00 0.00 3.02
2644 4158 7.227512 TCTCTTTCAAATCAAGAAGTTCTGGTC 59.772 37.037 6.06 0.00 29.74 4.02
2653 4167 8.924511 ATCAAGAAGTTCTGGTCAAATTTCTA 57.075 30.769 6.06 0.00 33.23 2.10
2654 4168 8.383318 TCAAGAAGTTCTGGTCAAATTTCTAG 57.617 34.615 6.06 0.00 33.23 2.43
2656 4170 6.299141 AGAAGTTCTGGTCAAATTTCTAGCA 58.701 36.000 4.10 0.00 32.79 3.49
2670 4184 6.793492 ATTTCTAGCACTGTTCACTTTCTC 57.207 37.500 0.00 0.00 0.00 2.87
2675 4189 7.497595 TCTAGCACTGTTCACTTTCTCTAAAA 58.502 34.615 0.00 0.00 0.00 1.52
2708 4222 1.880027 GGCACAAACTGTAGTTCCTGG 59.120 52.381 0.00 0.00 37.25 4.45
2711 4225 2.549754 CACAAACTGTAGTTCCTGGCAG 59.450 50.000 7.75 7.75 37.25 4.85
2723 4237 4.770010 AGTTCCTGGCAGTATATCTAGCTC 59.230 45.833 14.43 0.00 0.00 4.09
2726 4240 2.489722 CTGGCAGTATATCTAGCTCGCA 59.510 50.000 6.28 0.00 0.00 5.10
2728 4242 3.246619 GGCAGTATATCTAGCTCGCAAC 58.753 50.000 0.00 0.00 0.00 4.17
2729 4243 3.305403 GGCAGTATATCTAGCTCGCAACA 60.305 47.826 0.00 0.00 0.00 3.33
2730 4244 3.917380 GCAGTATATCTAGCTCGCAACAG 59.083 47.826 0.00 0.00 0.00 3.16
2731 4245 4.557695 GCAGTATATCTAGCTCGCAACAGT 60.558 45.833 0.00 0.00 0.00 3.55
2732 4246 5.334957 GCAGTATATCTAGCTCGCAACAGTA 60.335 44.000 0.00 0.00 0.00 2.74
2733 4247 6.669278 CAGTATATCTAGCTCGCAACAGTAA 58.331 40.000 0.00 0.00 0.00 2.24
2734 4248 6.579292 CAGTATATCTAGCTCGCAACAGTAAC 59.421 42.308 0.00 0.00 0.00 2.50
2735 4249 3.868757 ATCTAGCTCGCAACAGTAACA 57.131 42.857 0.00 0.00 0.00 2.41
2743 4610 3.183754 TCGCAACAGTAACATCATACCG 58.816 45.455 0.00 0.00 0.00 4.02
2747 4614 5.233476 CGCAACAGTAACATCATACCGTTAT 59.767 40.000 0.00 0.00 28.09 1.89
2821 4689 5.246203 GGCATATCTCCACCTAACTCATGTA 59.754 44.000 0.00 0.00 0.00 2.29
2852 4720 7.589958 TTGCCACAGGAAATTTAGAACTTTA 57.410 32.000 0.00 0.00 0.00 1.85
2853 4721 7.589958 TGCCACAGGAAATTTAGAACTTTAA 57.410 32.000 0.00 0.00 0.00 1.52
2905 4880 8.738106 CCAAATAAATGCCCATATTTTGTTGTT 58.262 29.630 0.00 0.00 31.17 2.83
2913 4888 6.183360 TGCCCATATTTTGTTGTTGAAGAACT 60.183 34.615 6.76 0.00 32.79 3.01
2914 4889 6.705825 GCCCATATTTTGTTGTTGAAGAACTT 59.294 34.615 6.76 0.00 32.79 2.66
2915 4890 7.307337 GCCCATATTTTGTTGTTGAAGAACTTG 60.307 37.037 6.76 0.00 32.79 3.16
2944 4919 6.112734 TGAAGAACTTCAACAACAGAAGCTA 58.887 36.000 13.78 0.00 45.56 3.32
2951 4926 7.196331 ACTTCAACAACAGAAGCTATTTTCAC 58.804 34.615 0.00 0.00 44.87 3.18
2957 4932 6.547510 ACAACAGAAGCTATTTTCACCTTCTT 59.452 34.615 0.00 0.00 41.35 2.52
2985 4961 7.571025 ACTATAGTGATAACCAAAATTCCGGT 58.429 34.615 4.10 0.00 36.98 5.28
2992 4968 1.247567 CCAAAATTCCGGTCAGCACT 58.752 50.000 0.00 0.00 0.00 4.40
2996 4972 3.695830 AAATTCCGGTCAGCACTCTTA 57.304 42.857 0.00 0.00 0.00 2.10
2997 4973 2.674796 ATTCCGGTCAGCACTCTTAC 57.325 50.000 0.00 0.00 0.00 2.34
2998 4974 0.242825 TTCCGGTCAGCACTCTTACG 59.757 55.000 0.00 0.00 0.00 3.18
2999 4975 1.805945 CCGGTCAGCACTCTTACGC 60.806 63.158 0.00 0.00 0.00 4.42
3000 4976 1.080772 CGGTCAGCACTCTTACGCA 60.081 57.895 0.00 0.00 0.00 5.24
3004 4980 2.289547 GGTCAGCACTCTTACGCAAAAA 59.710 45.455 0.00 0.00 0.00 1.94
3036 5012 8.800231 TGAAATGTACATGAGTGTGATTTTTG 57.200 30.769 9.63 0.00 39.39 2.44
3047 5023 4.101430 AGTGTGATTTTTGGAGGCAAACAT 59.899 37.500 0.00 0.00 0.00 2.71
3051 5027 2.818130 TTTTGGAGGCAAACATGCTC 57.182 45.000 0.00 0.00 34.73 4.26
3052 5028 1.702182 TTTGGAGGCAAACATGCTCA 58.298 45.000 0.00 0.00 34.73 4.26
3053 5029 1.250328 TTGGAGGCAAACATGCTCAG 58.750 50.000 0.00 0.00 34.73 3.35
3054 5030 1.246056 TGGAGGCAAACATGCTCAGC 61.246 55.000 0.00 0.00 34.73 4.26
3057 5033 1.509923 GGCAAACATGCTCAGCCTC 59.490 57.895 10.71 0.00 42.01 4.70
3058 5034 1.246056 GGCAAACATGCTCAGCCTCA 61.246 55.000 10.71 0.00 42.01 3.86
3059 5035 0.170561 GCAAACATGCTCAGCCTCAG 59.829 55.000 0.00 0.00 0.00 3.35
3068 5061 4.134379 TGCTCAGCCTCAGAAAATCTAG 57.866 45.455 0.00 0.00 0.00 2.43
3071 5064 5.047188 GCTCAGCCTCAGAAAATCTAGTAC 58.953 45.833 0.00 0.00 0.00 2.73
3121 5114 7.118723 TCATGCCTCTTTATACAGACCAAATT 58.881 34.615 0.00 0.00 0.00 1.82
3131 5124 9.562408 TTTATACAGACCAAATTGACAGTACAA 57.438 29.630 0.00 0.00 0.00 2.41
3146 5139 6.657541 TGACAGTACAATTTCCCCAAATAGAC 59.342 38.462 0.00 0.00 31.51 2.59
3204 5271 4.878439 TGTAACTGACATCACACCACTAC 58.122 43.478 0.00 0.00 31.20 2.73
3222 5297 3.846588 ACTACCTGGTCAATGGAAGACAT 59.153 43.478 0.63 0.00 43.07 3.06
3256 5331 0.610232 AGCTGGCCAATGGAAGACAC 60.610 55.000 7.01 0.00 0.00 3.67
3257 5332 0.895100 GCTGGCCAATGGAAGACACA 60.895 55.000 7.01 0.00 0.00 3.72
3258 5333 1.619654 CTGGCCAATGGAAGACACAA 58.380 50.000 7.01 0.00 0.00 3.33
3259 5334 1.962807 CTGGCCAATGGAAGACACAAA 59.037 47.619 7.01 0.00 0.00 2.83
3260 5335 2.364970 CTGGCCAATGGAAGACACAAAA 59.635 45.455 7.01 0.00 0.00 2.44
3261 5336 2.364970 TGGCCAATGGAAGACACAAAAG 59.635 45.455 0.61 0.00 0.00 2.27
3262 5337 2.627699 GGCCAATGGAAGACACAAAAGA 59.372 45.455 2.05 0.00 0.00 2.52
3263 5338 3.069443 GGCCAATGGAAGACACAAAAGAA 59.931 43.478 2.05 0.00 0.00 2.52
3264 5339 4.442753 GGCCAATGGAAGACACAAAAGAAA 60.443 41.667 2.05 0.00 0.00 2.52
3265 5340 5.299949 GCCAATGGAAGACACAAAAGAAAT 58.700 37.500 2.05 0.00 0.00 2.17
3266 5341 6.454795 GCCAATGGAAGACACAAAAGAAATA 58.545 36.000 2.05 0.00 0.00 1.40
3267 5342 6.366061 GCCAATGGAAGACACAAAAGAAATAC 59.634 38.462 2.05 0.00 0.00 1.89
3268 5343 7.661040 CCAATGGAAGACACAAAAGAAATACT 58.339 34.615 0.00 0.00 0.00 2.12
3269 5344 7.809806 CCAATGGAAGACACAAAAGAAATACTC 59.190 37.037 0.00 0.00 0.00 2.59
3270 5345 8.352201 CAATGGAAGACACAAAAGAAATACTCA 58.648 33.333 0.00 0.00 0.00 3.41
3271 5346 7.259290 TGGAAGACACAAAAGAAATACTCAC 57.741 36.000 0.00 0.00 0.00 3.51
3272 5347 7.054124 TGGAAGACACAAAAGAAATACTCACT 58.946 34.615 0.00 0.00 0.00 3.41
3273 5348 7.012327 TGGAAGACACAAAAGAAATACTCACTG 59.988 37.037 0.00 0.00 0.00 3.66
3274 5349 7.226720 GGAAGACACAAAAGAAATACTCACTGA 59.773 37.037 0.00 0.00 0.00 3.41
3275 5350 8.506168 AAGACACAAAAGAAATACTCACTGAA 57.494 30.769 0.00 0.00 0.00 3.02
3276 5351 7.920738 AGACACAAAAGAAATACTCACTGAAC 58.079 34.615 0.00 0.00 0.00 3.18
3277 5352 7.770897 AGACACAAAAGAAATACTCACTGAACT 59.229 33.333 0.00 0.00 0.00 3.01
3278 5353 7.920738 ACACAAAAGAAATACTCACTGAACTC 58.079 34.615 0.00 0.00 0.00 3.01
3279 5354 7.552687 ACACAAAAGAAATACTCACTGAACTCA 59.447 33.333 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.265635 ACACACAACACACACACACAC 59.734 47.619 0.00 0.00 0.00 3.82
1 2 1.265365 CACACACAACACACACACACA 59.735 47.619 0.00 0.00 0.00 3.72
2 3 1.265635 ACACACACAACACACACACAC 59.734 47.619 0.00 0.00 0.00 3.82
3 4 1.265365 CACACACACAACACACACACA 59.735 47.619 0.00 0.00 0.00 3.72
4 5 1.265635 ACACACACACAACACACACAC 59.734 47.619 0.00 0.00 0.00 3.82
5 6 1.265365 CACACACACACAACACACACA 59.735 47.619 0.00 0.00 0.00 3.72
6 7 1.265635 ACACACACACACAACACACAC 59.734 47.619 0.00 0.00 0.00 3.82
7 8 1.265365 CACACACACACACAACACACA 59.735 47.619 0.00 0.00 0.00 3.72
8 9 1.265635 ACACACACACACACAACACAC 59.734 47.619 0.00 0.00 0.00 3.82
9 10 1.265365 CACACACACACACACAACACA 59.735 47.619 0.00 0.00 0.00 3.72
10 11 1.265635 ACACACACACACACACAACAC 59.734 47.619 0.00 0.00 0.00 3.32
11 12 1.265365 CACACACACACACACACAACA 59.735 47.619 0.00 0.00 0.00 3.33
12 13 1.265635 ACACACACACACACACACAAC 59.734 47.619 0.00 0.00 0.00 3.32
13 14 1.265365 CACACACACACACACACACAA 59.735 47.619 0.00 0.00 0.00 3.33
14 15 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
15 16 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
16 17 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
17 18 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
18 19 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
19 20 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
20 21 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
21 22 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
22 23 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
23 24 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
24 25 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
25 26 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
26 27 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
27 28 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
28 29 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
29 30 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
30 31 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
31 32 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
32 33 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
33 34 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
34 35 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
35 36 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
36 37 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
37 38 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82
70 71 3.784701 ACCAAAATAAACACGCACACA 57.215 38.095 0.00 0.00 0.00 3.72
448 1034 4.771590 TTAGCAAGATTCCTGCAACAAG 57.228 40.909 9.79 0.00 0.00 3.16
732 1403 7.009083 GTCATGCATGCAAATTGTAAATTACGA 59.991 33.333 26.68 0.00 0.00 3.43
742 1413 5.142635 CATGAAGTCATGCATGCAAATTG 57.857 39.130 26.68 18.78 45.92 2.32
814 1498 6.920758 CCGTCCACAGAATCTTCTATTTCTAG 59.079 42.308 0.00 0.00 35.34 2.43
846 1530 1.150764 GGGTATTACAGGCCCAGGC 59.849 63.158 0.00 0.00 41.93 4.85
847 1531 2.627771 TGGGTATTACAGGCCCAGG 58.372 57.895 0.00 0.00 46.59 4.45
910 1606 2.125229 TCCTCGTCCTCGTCCTCG 60.125 66.667 0.00 0.00 38.33 4.63
911 1607 2.474612 GCTCCTCGTCCTCGTCCTC 61.475 68.421 0.00 0.00 38.33 3.71
912 1608 2.438795 GCTCCTCGTCCTCGTCCT 60.439 66.667 0.00 0.00 38.33 3.85
913 1609 3.878519 CGCTCCTCGTCCTCGTCC 61.879 72.222 0.00 0.00 38.33 4.79
914 1610 3.878519 CCGCTCCTCGTCCTCGTC 61.879 72.222 0.00 0.00 38.33 4.20
915 1611 4.405671 TCCGCTCCTCGTCCTCGT 62.406 66.667 0.00 0.00 38.33 4.18
916 1612 3.878519 GTCCGCTCCTCGTCCTCG 61.879 72.222 0.00 0.00 36.19 4.63
989 1685 2.159028 CGGACCTTCATCTTCCTCTTCC 60.159 54.545 0.00 0.00 0.00 3.46
990 1686 2.740256 GCGGACCTTCATCTTCCTCTTC 60.740 54.545 0.00 0.00 0.00 2.87
991 1687 1.208293 GCGGACCTTCATCTTCCTCTT 59.792 52.381 0.00 0.00 0.00 2.85
992 1688 0.827368 GCGGACCTTCATCTTCCTCT 59.173 55.000 0.00 0.00 0.00 3.69
993 1689 0.528684 CGCGGACCTTCATCTTCCTC 60.529 60.000 0.00 0.00 0.00 3.71
994 1690 1.517832 CGCGGACCTTCATCTTCCT 59.482 57.895 0.00 0.00 0.00 3.36
1193 1889 2.000447 CGCGGGGAGAGTTAAAAAGAG 59.000 52.381 0.00 0.00 0.00 2.85
1194 1890 1.619827 TCGCGGGGAGAGTTAAAAAGA 59.380 47.619 6.13 0.00 0.00 2.52
1195 1891 2.088950 TCGCGGGGAGAGTTAAAAAG 57.911 50.000 6.13 0.00 0.00 2.27
1197 1893 1.942586 GCTTCGCGGGGAGAGTTAAAA 60.943 52.381 12.81 0.00 0.00 1.52
1198 1894 0.390735 GCTTCGCGGGGAGAGTTAAA 60.391 55.000 12.81 0.00 0.00 1.52
1199 1895 1.217244 GCTTCGCGGGGAGAGTTAA 59.783 57.895 12.81 0.00 0.00 2.01
1200 1896 1.945354 CTGCTTCGCGGGGAGAGTTA 61.945 60.000 12.81 0.00 0.00 2.24
1201 1897 3.302347 CTGCTTCGCGGGGAGAGTT 62.302 63.158 12.81 0.00 0.00 3.01
1202 1898 3.764466 CTGCTTCGCGGGGAGAGT 61.764 66.667 12.81 0.00 0.00 3.24
1228 1968 3.260884 TCTCGTGGATGCTTTTAGAACCT 59.739 43.478 0.00 0.00 0.00 3.50
1229 1969 3.596214 TCTCGTGGATGCTTTTAGAACC 58.404 45.455 0.00 0.00 0.00 3.62
1230 1970 5.447818 CCAATCTCGTGGATGCTTTTAGAAC 60.448 44.000 0.00 0.00 41.65 3.01
1231 1971 4.635765 CCAATCTCGTGGATGCTTTTAGAA 59.364 41.667 0.00 0.00 41.65 2.10
1232 1972 4.191544 CCAATCTCGTGGATGCTTTTAGA 58.808 43.478 0.00 0.00 41.65 2.10
1233 1973 3.941483 ACCAATCTCGTGGATGCTTTTAG 59.059 43.478 0.00 0.00 41.65 1.85
1234 1974 3.950397 ACCAATCTCGTGGATGCTTTTA 58.050 40.909 0.00 0.00 41.65 1.52
1235 1975 2.795329 ACCAATCTCGTGGATGCTTTT 58.205 42.857 0.00 0.00 41.65 2.27
1236 1976 2.489329 CAACCAATCTCGTGGATGCTTT 59.511 45.455 0.00 0.00 41.65 3.51
1237 1977 2.086869 CAACCAATCTCGTGGATGCTT 58.913 47.619 0.00 0.00 41.65 3.91
1238 1978 1.679944 CCAACCAATCTCGTGGATGCT 60.680 52.381 0.00 0.00 41.65 3.79
1239 1979 0.734889 CCAACCAATCTCGTGGATGC 59.265 55.000 0.00 0.00 41.65 3.91
1240 1980 2.113860 ACCAACCAATCTCGTGGATG 57.886 50.000 0.00 0.00 41.65 3.51
1241 1981 2.819608 CAAACCAACCAATCTCGTGGAT 59.180 45.455 0.00 0.00 41.65 3.41
1242 1982 2.226330 CAAACCAACCAATCTCGTGGA 58.774 47.619 0.00 0.00 41.65 4.02
1243 1983 1.269448 CCAAACCAACCAATCTCGTGG 59.731 52.381 0.00 0.00 44.92 4.94
1244 1984 1.953686 ACCAAACCAACCAATCTCGTG 59.046 47.619 0.00 0.00 0.00 4.35
1245 1985 2.227194 GACCAAACCAACCAATCTCGT 58.773 47.619 0.00 0.00 0.00 4.18
1246 1986 1.196808 CGACCAAACCAACCAATCTCG 59.803 52.381 0.00 0.00 0.00 4.04
1247 1987 2.225727 GACGACCAAACCAACCAATCTC 59.774 50.000 0.00 0.00 0.00 2.75
1248 1988 2.158667 AGACGACCAAACCAACCAATCT 60.159 45.455 0.00 0.00 0.00 2.40
1249 1989 2.031157 CAGACGACCAAACCAACCAATC 60.031 50.000 0.00 0.00 0.00 2.67
1250 1990 1.953686 CAGACGACCAAACCAACCAAT 59.046 47.619 0.00 0.00 0.00 3.16
1251 1991 1.384525 CAGACGACCAAACCAACCAA 58.615 50.000 0.00 0.00 0.00 3.67
1252 1992 1.098712 GCAGACGACCAAACCAACCA 61.099 55.000 0.00 0.00 0.00 3.67
1253 1993 0.818040 AGCAGACGACCAAACCAACC 60.818 55.000 0.00 0.00 0.00 3.77
1254 1994 0.586802 GAGCAGACGACCAAACCAAC 59.413 55.000 0.00 0.00 0.00 3.77
1255 1995 0.878523 CGAGCAGACGACCAAACCAA 60.879 55.000 0.00 0.00 35.09 3.67
1260 2000 0.317160 AATCACGAGCAGACGACCAA 59.683 50.000 5.12 0.00 37.03 3.67
1268 2008 1.751351 TGTCCTAGGAATCACGAGCAG 59.249 52.381 14.65 0.00 0.00 4.24
1331 2074 1.069358 CGCCTCTTTAGGGACCAGATC 59.931 57.143 0.00 0.00 43.87 2.75
1433 2186 8.614346 GGTACTTGTGTAAGTGTAAATTGTTCA 58.386 33.333 3.11 0.00 46.28 3.18
1495 2248 4.993705 TGTAAAGGGAGGTCAGTCATTT 57.006 40.909 0.00 0.00 0.00 2.32
1522 2275 2.424956 GAGCTCATTTTTGGGCTAGTGG 59.575 50.000 9.40 0.00 35.01 4.00
1531 2284 2.264813 CATTGCCCGAGCTCATTTTTG 58.735 47.619 15.40 0.00 40.80 2.44
1546 2302 2.613691 CATCCAAGCTGAAACCATTGC 58.386 47.619 0.00 0.00 0.00 3.56
1568 2324 1.091771 GCAGTCCGGTGGATCACATG 61.092 60.000 0.00 0.00 35.86 3.21
1570 2326 1.480212 AAGCAGTCCGGTGGATCACA 61.480 55.000 0.00 0.00 35.86 3.58
1572 2328 1.191489 TCAAGCAGTCCGGTGGATCA 61.191 55.000 0.00 0.00 32.73 2.92
1573 2329 0.179000 ATCAAGCAGTCCGGTGGATC 59.821 55.000 0.00 0.00 29.16 3.36
1575 2331 1.191489 TGATCAAGCAGTCCGGTGGA 61.191 55.000 0.00 0.00 0.00 4.02
1577 2333 0.036952 AGTGATCAAGCAGTCCGGTG 60.037 55.000 0.00 0.00 0.00 4.94
1578 2334 0.687354 AAGTGATCAAGCAGTCCGGT 59.313 50.000 0.00 0.00 0.00 5.28
1579 2335 1.081892 CAAGTGATCAAGCAGTCCGG 58.918 55.000 0.00 0.00 0.00 5.14
1580 2336 0.445436 GCAAGTGATCAAGCAGTCCG 59.555 55.000 0.00 0.00 0.00 4.79
1581 2337 1.818642 AGCAAGTGATCAAGCAGTCC 58.181 50.000 15.70 0.00 0.00 3.85
1582 2338 2.935201 CCTAGCAAGTGATCAAGCAGTC 59.065 50.000 15.70 0.00 0.00 3.51
1583 2339 2.938756 GCCTAGCAAGTGATCAAGCAGT 60.939 50.000 15.70 2.24 0.00 4.40
1584 2340 1.669779 GCCTAGCAAGTGATCAAGCAG 59.330 52.381 15.70 11.22 0.00 4.24
1585 2341 1.280133 AGCCTAGCAAGTGATCAAGCA 59.720 47.619 15.70 4.35 0.00 3.91
1586 2342 1.669779 CAGCCTAGCAAGTGATCAAGC 59.330 52.381 0.00 2.10 0.00 4.01
1587 2343 1.669779 GCAGCCTAGCAAGTGATCAAG 59.330 52.381 0.00 0.00 0.00 3.02
1588 2344 1.280133 AGCAGCCTAGCAAGTGATCAA 59.720 47.619 0.00 0.00 36.85 2.57
1589 2345 0.907486 AGCAGCCTAGCAAGTGATCA 59.093 50.000 0.00 0.00 36.85 2.92
1590 2346 1.580815 GAGCAGCCTAGCAAGTGATC 58.419 55.000 0.00 0.00 36.85 2.92
1591 2347 0.179936 GGAGCAGCCTAGCAAGTGAT 59.820 55.000 0.00 0.00 36.85 3.06
1592 2348 1.599047 GGAGCAGCCTAGCAAGTGA 59.401 57.895 0.00 0.00 36.85 3.41
1593 2349 4.215349 GGAGCAGCCTAGCAAGTG 57.785 61.111 0.00 0.00 36.85 3.16
1602 2358 0.397254 TACTCAGGGTAGGAGCAGCC 60.397 60.000 0.00 0.00 35.79 4.85
1603 2359 1.710816 ATACTCAGGGTAGGAGCAGC 58.289 55.000 0.00 0.00 35.79 5.25
1604 2360 4.762289 AAAATACTCAGGGTAGGAGCAG 57.238 45.455 0.00 0.00 35.79 4.24
1605 2361 6.442564 TCTTAAAAATACTCAGGGTAGGAGCA 59.557 38.462 0.00 0.00 35.79 4.26
1606 2362 6.885922 TCTTAAAAATACTCAGGGTAGGAGC 58.114 40.000 0.00 0.00 35.79 4.70
1607 2363 7.496263 GCTTCTTAAAAATACTCAGGGTAGGAG 59.504 40.741 0.00 0.00 38.36 3.69
1608 2364 7.182206 AGCTTCTTAAAAATACTCAGGGTAGGA 59.818 37.037 0.00 0.00 33.51 2.94
1609 2365 7.339482 AGCTTCTTAAAAATACTCAGGGTAGG 58.661 38.462 0.00 0.00 33.51 3.18
1611 2367 9.832445 CATAGCTTCTTAAAAATACTCAGGGTA 57.168 33.333 0.00 0.00 34.62 3.69
1612 2368 7.775561 CCATAGCTTCTTAAAAATACTCAGGGT 59.224 37.037 0.00 0.00 0.00 4.34
1613 2369 7.229506 CCCATAGCTTCTTAAAAATACTCAGGG 59.770 40.741 0.00 0.00 0.00 4.45
1614 2370 7.255277 GCCCATAGCTTCTTAAAAATACTCAGG 60.255 40.741 0.00 0.00 38.99 3.86
1615 2371 7.283127 TGCCCATAGCTTCTTAAAAATACTCAG 59.717 37.037 0.00 0.00 44.23 3.35
1616 2372 7.116075 TGCCCATAGCTTCTTAAAAATACTCA 58.884 34.615 0.00 0.00 44.23 3.41
1617 2373 7.568199 TGCCCATAGCTTCTTAAAAATACTC 57.432 36.000 0.00 0.00 44.23 2.59
1618 2374 7.779798 TGATGCCCATAGCTTCTTAAAAATACT 59.220 33.333 0.00 0.00 44.13 2.12
1619 2375 7.862873 GTGATGCCCATAGCTTCTTAAAAATAC 59.137 37.037 0.00 0.00 44.13 1.89
1620 2376 7.779798 AGTGATGCCCATAGCTTCTTAAAAATA 59.220 33.333 0.00 0.00 44.13 1.40
1621 2377 6.608808 AGTGATGCCCATAGCTTCTTAAAAAT 59.391 34.615 0.00 0.00 44.13 1.82
1622 2378 5.951747 AGTGATGCCCATAGCTTCTTAAAAA 59.048 36.000 0.00 0.00 44.13 1.94
1623 2379 5.509498 AGTGATGCCCATAGCTTCTTAAAA 58.491 37.500 0.00 0.00 44.13 1.52
1624 2380 5.116084 AGTGATGCCCATAGCTTCTTAAA 57.884 39.130 0.00 0.00 44.13 1.52
1625 2381 4.778213 AGTGATGCCCATAGCTTCTTAA 57.222 40.909 0.00 0.00 44.13 1.85
1626 2382 4.164030 TGAAGTGATGCCCATAGCTTCTTA 59.836 41.667 17.35 4.45 44.13 2.10
1627 2383 3.054139 TGAAGTGATGCCCATAGCTTCTT 60.054 43.478 17.35 0.00 44.13 2.52
1628 2384 2.507058 TGAAGTGATGCCCATAGCTTCT 59.493 45.455 17.35 0.00 44.13 2.85
1629 2385 2.923121 TGAAGTGATGCCCATAGCTTC 58.077 47.619 0.00 13.06 44.08 3.86
1630 2386 3.370840 TTGAAGTGATGCCCATAGCTT 57.629 42.857 0.00 0.00 44.23 3.74
1631 2387 3.137913 AGATTGAAGTGATGCCCATAGCT 59.862 43.478 0.00 0.00 44.23 3.32
1632 2388 3.484407 AGATTGAAGTGATGCCCATAGC 58.516 45.455 0.00 0.00 44.14 2.97
1633 2389 4.070716 GGAGATTGAAGTGATGCCCATAG 58.929 47.826 0.00 0.00 0.00 2.23
1634 2390 3.718434 AGGAGATTGAAGTGATGCCCATA 59.282 43.478 0.00 0.00 0.00 2.74
1635 2391 2.512896 AGGAGATTGAAGTGATGCCCAT 59.487 45.455 0.00 0.00 0.00 4.00
1636 2392 1.918262 AGGAGATTGAAGTGATGCCCA 59.082 47.619 0.00 0.00 0.00 5.36
1637 2393 2.686915 CAAGGAGATTGAAGTGATGCCC 59.313 50.000 0.00 0.00 41.83 5.36
1638 2394 2.686915 CCAAGGAGATTGAAGTGATGCC 59.313 50.000 0.00 0.00 41.83 4.40
1639 2395 3.350833 ACCAAGGAGATTGAAGTGATGC 58.649 45.455 0.00 0.00 41.83 3.91
1640 2396 5.242393 ACAAACCAAGGAGATTGAAGTGATG 59.758 40.000 0.00 0.00 41.83 3.07
1641 2397 5.388654 ACAAACCAAGGAGATTGAAGTGAT 58.611 37.500 0.00 0.00 41.83 3.06
1642 2398 4.792068 ACAAACCAAGGAGATTGAAGTGA 58.208 39.130 0.00 0.00 41.83 3.41
1643 2399 4.580167 TGACAAACCAAGGAGATTGAAGTG 59.420 41.667 0.00 0.00 41.83 3.16
1644 2400 4.792068 TGACAAACCAAGGAGATTGAAGT 58.208 39.130 0.00 0.00 41.83 3.01
1645 2401 5.300286 ACTTGACAAACCAAGGAGATTGAAG 59.700 40.000 8.29 0.00 45.76 3.02
1646 2402 5.200483 ACTTGACAAACCAAGGAGATTGAA 58.800 37.500 8.29 0.00 45.76 2.69
1647 2403 4.792068 ACTTGACAAACCAAGGAGATTGA 58.208 39.130 8.29 0.00 45.76 2.57
1648 2404 5.284079 CAACTTGACAAACCAAGGAGATTG 58.716 41.667 8.29 0.00 45.76 2.67
1649 2405 4.202151 GCAACTTGACAAACCAAGGAGATT 60.202 41.667 8.29 0.00 45.76 2.40
1650 2406 3.319122 GCAACTTGACAAACCAAGGAGAT 59.681 43.478 8.29 0.00 45.76 2.75
1651 2407 2.687935 GCAACTTGACAAACCAAGGAGA 59.312 45.455 8.29 0.00 45.76 3.71
1652 2408 2.689983 AGCAACTTGACAAACCAAGGAG 59.310 45.455 8.29 2.12 45.76 3.69
1653 2409 2.426738 CAGCAACTTGACAAACCAAGGA 59.573 45.455 8.29 0.00 45.76 3.36
1654 2410 2.166254 ACAGCAACTTGACAAACCAAGG 59.834 45.455 8.29 0.00 45.76 3.61
1655 2411 3.508744 ACAGCAACTTGACAAACCAAG 57.491 42.857 0.00 0.00 46.61 3.61
1656 2412 3.256879 TCAACAGCAACTTGACAAACCAA 59.743 39.130 0.00 0.00 0.00 3.67
1657 2413 2.822561 TCAACAGCAACTTGACAAACCA 59.177 40.909 0.00 0.00 0.00 3.67
1658 2414 3.502191 TCAACAGCAACTTGACAAACC 57.498 42.857 0.00 0.00 0.00 3.27
1659 2415 4.923281 AGTTTCAACAGCAACTTGACAAAC 59.077 37.500 0.00 0.00 28.27 2.93
1660 2416 5.132897 AGTTTCAACAGCAACTTGACAAA 57.867 34.783 0.00 0.00 28.27 2.83
1661 2417 4.782019 AGTTTCAACAGCAACTTGACAA 57.218 36.364 0.00 0.00 28.27 3.18
1662 2418 4.782019 AAGTTTCAACAGCAACTTGACA 57.218 36.364 0.00 0.00 40.87 3.58
1663 2419 5.220024 CGAAAAGTTTCAACAGCAACTTGAC 60.220 40.000 4.76 0.00 41.42 3.18
1664 2420 4.856487 CGAAAAGTTTCAACAGCAACTTGA 59.144 37.500 4.76 0.00 41.42 3.02
1665 2421 4.856487 TCGAAAAGTTTCAACAGCAACTTG 59.144 37.500 4.76 0.00 41.42 3.16
1666 2422 5.054390 TCGAAAAGTTTCAACAGCAACTT 57.946 34.783 4.76 0.00 43.61 2.66
1667 2423 4.695217 TCGAAAAGTTTCAACAGCAACT 57.305 36.364 4.76 0.00 37.01 3.16
1668 2424 4.857037 AGTTCGAAAAGTTTCAACAGCAAC 59.143 37.500 0.00 5.48 37.01 4.17
1669 2425 4.856487 CAGTTCGAAAAGTTTCAACAGCAA 59.144 37.500 0.00 0.00 37.01 3.91
1670 2426 4.155099 TCAGTTCGAAAAGTTTCAACAGCA 59.845 37.500 0.00 3.51 37.01 4.41
1671 2427 4.658071 TCAGTTCGAAAAGTTTCAACAGC 58.342 39.130 0.00 0.00 37.01 4.40
1676 2432 9.483916 TCACTATAATCAGTTCGAAAAGTTTCA 57.516 29.630 0.00 0.00 37.01 2.69
1680 2436 9.706691 TCTTTCACTATAATCAGTTCGAAAAGT 57.293 29.630 0.00 0.00 0.00 2.66
1682 2438 9.151471 CCTCTTTCACTATAATCAGTTCGAAAA 57.849 33.333 0.00 0.00 0.00 2.29
1683 2439 8.311836 ACCTCTTTCACTATAATCAGTTCGAAA 58.688 33.333 0.00 0.00 0.00 3.46
1684 2440 7.837863 ACCTCTTTCACTATAATCAGTTCGAA 58.162 34.615 0.00 0.00 0.00 3.71
1685 2441 7.406031 ACCTCTTTCACTATAATCAGTTCGA 57.594 36.000 0.00 0.00 0.00 3.71
1686 2442 8.480643 AAACCTCTTTCACTATAATCAGTTCG 57.519 34.615 0.00 0.00 0.00 3.95
1688 2444 9.232473 GGAAAACCTCTTTCACTATAATCAGTT 57.768 33.333 0.16 0.00 0.00 3.16
1689 2445 8.383175 TGGAAAACCTCTTTCACTATAATCAGT 58.617 33.333 0.16 0.00 0.00 3.41
1690 2446 8.792830 TGGAAAACCTCTTTCACTATAATCAG 57.207 34.615 0.16 0.00 0.00 2.90
1691 2447 8.383175 ACTGGAAAACCTCTTTCACTATAATCA 58.617 33.333 0.16 0.00 0.00 2.57
1692 2448 8.669243 CACTGGAAAACCTCTTTCACTATAATC 58.331 37.037 0.16 0.00 0.00 1.75
1693 2449 8.164070 ACACTGGAAAACCTCTTTCACTATAAT 58.836 33.333 0.16 0.00 0.00 1.28
1694 2450 7.514721 ACACTGGAAAACCTCTTTCACTATAA 58.485 34.615 0.16 0.00 0.00 0.98
1695 2451 7.074653 ACACTGGAAAACCTCTTTCACTATA 57.925 36.000 0.16 0.00 0.00 1.31
1696 2452 5.941788 ACACTGGAAAACCTCTTTCACTAT 58.058 37.500 0.16 0.00 0.00 2.12
1697 2453 5.367945 ACACTGGAAAACCTCTTTCACTA 57.632 39.130 0.16 0.00 0.00 2.74
1698 2454 4.236527 ACACTGGAAAACCTCTTTCACT 57.763 40.909 0.16 0.00 0.00 3.41
1699 2455 4.023963 GCTACACTGGAAAACCTCTTTCAC 60.024 45.833 0.16 0.00 0.00 3.18
1700 2456 4.134563 GCTACACTGGAAAACCTCTTTCA 58.865 43.478 0.16 0.00 0.00 2.69
1701 2457 3.502595 GGCTACACTGGAAAACCTCTTTC 59.497 47.826 0.00 0.00 0.00 2.62
1702 2458 3.138468 AGGCTACACTGGAAAACCTCTTT 59.862 43.478 0.00 0.00 0.00 2.52
1703 2459 2.711547 AGGCTACACTGGAAAACCTCTT 59.288 45.455 0.00 0.00 0.00 2.85
1704 2460 2.303311 GAGGCTACACTGGAAAACCTCT 59.697 50.000 0.00 0.00 39.30 3.69
1705 2461 2.303311 AGAGGCTACACTGGAAAACCTC 59.697 50.000 0.00 0.00 42.06 3.85
1706 2462 2.339769 AGAGGCTACACTGGAAAACCT 58.660 47.619 0.00 0.00 0.00 3.50
1707 2463 2.861147 AGAGGCTACACTGGAAAACC 57.139 50.000 0.00 0.00 0.00 3.27
1708 2464 4.691216 CAGTAAGAGGCTACACTGGAAAAC 59.309 45.833 12.48 0.00 35.77 2.43
1716 2472 4.081586 AGCTTAACCAGTAAGAGGCTACAC 60.082 45.833 0.00 0.00 41.70 2.90
1717 2473 4.094476 AGCTTAACCAGTAAGAGGCTACA 58.906 43.478 0.00 0.00 41.70 2.74
1718 2474 4.739587 AGCTTAACCAGTAAGAGGCTAC 57.260 45.455 0.00 0.00 41.70 3.58
1744 2500 3.629398 GGAGATGCCCTGTAATTCAACAG 59.371 47.826 1.91 1.91 45.33 3.16
1745 2501 3.010027 TGGAGATGCCCTGTAATTCAACA 59.990 43.478 0.00 0.00 34.97 3.33
1746 2502 3.620488 TGGAGATGCCCTGTAATTCAAC 58.380 45.455 0.00 0.00 34.97 3.18
1755 2511 1.187974 TTGCAAATGGAGATGCCCTG 58.812 50.000 0.00 0.00 41.87 4.45
1757 2513 2.093341 ACAATTGCAAATGGAGATGCCC 60.093 45.455 18.39 0.00 41.87 5.36
1760 2516 4.325204 CGTGAACAATTGCAAATGGAGATG 59.675 41.667 18.39 3.63 0.00 2.90
1775 2532 4.496360 TCACAACAGTAACTCGTGAACAA 58.504 39.130 0.00 0.00 33.86 2.83
1783 2540 7.822822 AGGTATATTGGTTCACAACAGTAACTC 59.177 37.037 0.00 0.00 42.94 3.01
1788 2545 7.011499 TGTAGGTATATTGGTTCACAACAGT 57.989 36.000 0.00 0.00 42.94 3.55
1789 2546 9.778741 ATATGTAGGTATATTGGTTCACAACAG 57.221 33.333 0.00 0.00 42.94 3.16
1846 2603 9.715121 AGAATGCATTTAACATTGAAATCACTT 57.285 25.926 14.33 0.00 37.85 3.16
1871 2628 5.126061 AGGAATAACCATGCTAACTGCAAAG 59.874 40.000 0.00 0.00 45.45 2.77
1872 2629 5.016173 AGGAATAACCATGCTAACTGCAAA 58.984 37.500 0.00 0.00 45.45 3.68
1881 2638 5.104360 ACAGATACACAGGAATAACCATGCT 60.104 40.000 0.00 0.00 42.04 3.79
1890 2647 6.625267 AGGATAGGTACAGATACACAGGAAT 58.375 40.000 0.00 0.00 32.40 3.01
1891 2648 6.027025 AGGATAGGTACAGATACACAGGAA 57.973 41.667 0.00 0.00 32.40 3.36
1893 2650 4.456222 CGAGGATAGGTACAGATACACAGG 59.544 50.000 0.00 0.00 32.40 4.00
1894 2651 4.456222 CCGAGGATAGGTACAGATACACAG 59.544 50.000 0.00 0.00 32.40 3.66
1901 2658 1.214673 ACAGCCGAGGATAGGTACAGA 59.785 52.381 0.00 0.00 31.21 3.41
1909 2666 7.431249 CAGTATAAAAGTAACAGCCGAGGATA 58.569 38.462 0.00 0.00 0.00 2.59
1910 2667 6.281405 CAGTATAAAAGTAACAGCCGAGGAT 58.719 40.000 0.00 0.00 0.00 3.24
1915 2672 4.630069 AGTGCAGTATAAAAGTAACAGCCG 59.370 41.667 0.00 0.00 0.00 5.52
1918 2675 6.480524 TGCAGTGCAGTATAAAAGTAACAG 57.519 37.500 15.37 0.00 33.32 3.16
1924 2681 9.571810 TTTGATAAATGCAGTGCAGTATAAAAG 57.428 29.630 24.20 0.00 43.65 2.27
1931 2688 3.573538 TGGTTTGATAAATGCAGTGCAGT 59.426 39.130 24.20 19.09 43.65 4.40
1932 2689 4.177165 TGGTTTGATAAATGCAGTGCAG 57.823 40.909 24.20 0.00 43.65 4.41
1933 2690 4.039004 AGTTGGTTTGATAAATGCAGTGCA 59.961 37.500 22.22 22.22 44.86 4.57
1934 2691 4.559153 AGTTGGTTTGATAAATGCAGTGC 58.441 39.130 8.58 8.58 0.00 4.40
1935 2692 9.454585 CATATAGTTGGTTTGATAAATGCAGTG 57.545 33.333 0.00 0.00 0.00 3.66
1936 2693 8.632679 CCATATAGTTGGTTTGATAAATGCAGT 58.367 33.333 0.00 0.00 31.74 4.40
1972 2729 1.933021 TTCGCTCTCCTTGGACCTTA 58.067 50.000 0.00 0.00 0.00 2.69
1973 2730 1.056660 TTTCGCTCTCCTTGGACCTT 58.943 50.000 0.00 0.00 0.00 3.50
1974 2731 0.321996 GTTTCGCTCTCCTTGGACCT 59.678 55.000 0.00 0.00 0.00 3.85
1975 2732 0.321996 AGTTTCGCTCTCCTTGGACC 59.678 55.000 0.00 0.00 0.00 4.46
1976 2733 2.070028 GAAGTTTCGCTCTCCTTGGAC 58.930 52.381 0.00 0.00 0.00 4.02
1978 2735 2.072298 CTGAAGTTTCGCTCTCCTTGG 58.928 52.381 0.00 0.00 0.00 3.61
1980 2737 2.365617 TGACTGAAGTTTCGCTCTCCTT 59.634 45.455 0.00 0.00 0.00 3.36
1982 2739 2.440539 TGACTGAAGTTTCGCTCTCC 57.559 50.000 0.00 0.00 0.00 3.71
1983 2740 4.034048 TGTTTTGACTGAAGTTTCGCTCTC 59.966 41.667 0.00 0.00 0.00 3.20
1984 2741 3.938963 TGTTTTGACTGAAGTTTCGCTCT 59.061 39.130 0.00 0.00 0.00 4.09
1985 2742 4.034048 TCTGTTTTGACTGAAGTTTCGCTC 59.966 41.667 0.00 0.00 0.00 5.03
1986 2743 3.938963 TCTGTTTTGACTGAAGTTTCGCT 59.061 39.130 0.00 0.00 0.00 4.93
1987 2744 4.273005 TCTGTTTTGACTGAAGTTTCGC 57.727 40.909 0.00 0.00 0.00 4.70
1988 2745 5.627172 TGTTCTGTTTTGACTGAAGTTTCG 58.373 37.500 0.06 0.00 0.00 3.46
1989 2746 5.513141 GCTGTTCTGTTTTGACTGAAGTTTC 59.487 40.000 0.06 0.00 0.00 2.78
1990 2747 5.183904 AGCTGTTCTGTTTTGACTGAAGTTT 59.816 36.000 0.00 0.00 0.00 2.66
1992 2749 4.095483 CAGCTGTTCTGTTTTGACTGAAGT 59.905 41.667 5.25 0.00 38.02 3.01
1997 2777 2.301346 CCCAGCTGTTCTGTTTTGACT 58.699 47.619 13.81 0.00 41.25 3.41
2006 2786 1.770110 TGGTGACCCCAGCTGTTCT 60.770 57.895 13.81 0.00 38.72 3.01
2007 2787 1.600916 GTGGTGACCCCAGCTGTTC 60.601 63.158 13.81 6.62 46.45 3.18
2015 2795 2.032681 GCAGTCTGTGGTGACCCC 59.967 66.667 0.00 0.00 37.66 4.95
2028 2808 6.901081 AAAGAAACTATTAGCAAAGGCAGT 57.099 33.333 0.00 0.00 44.61 4.40
2054 2841 4.261581 GCGTATCGCGTATTATTCTACACC 59.738 45.833 5.77 0.00 44.55 4.16
2071 3579 3.374367 GGAACCAAAAGGAGAAGCGTATC 59.626 47.826 0.00 0.00 0.00 2.24
2076 3584 2.893489 ACATGGAACCAAAAGGAGAAGC 59.107 45.455 0.00 0.00 0.00 3.86
2085 3593 7.214467 GAAGAATTCAGTACATGGAACCAAA 57.786 36.000 8.44 0.00 46.62 3.28
2098 3606 8.934023 TGGTTAACCAATAAGAAGAATTCAGT 57.066 30.769 25.19 0.00 45.78 3.41
2147 3656 5.769662 AGAACATCAAGTGTCAAATTAGGCA 59.230 36.000 0.00 0.00 41.14 4.75
2182 3691 3.279434 CCTTGGAAGCCCTACAATACAC 58.721 50.000 0.00 0.00 0.00 2.90
2183 3692 2.916934 ACCTTGGAAGCCCTACAATACA 59.083 45.455 0.00 0.00 0.00 2.29
2184 3693 3.279434 CACCTTGGAAGCCCTACAATAC 58.721 50.000 0.00 0.00 0.00 1.89
2185 3694 2.241176 CCACCTTGGAAGCCCTACAATA 59.759 50.000 0.00 0.00 40.96 1.90
2186 3695 1.005924 CCACCTTGGAAGCCCTACAAT 59.994 52.381 0.00 0.00 40.96 2.71
2209 3718 0.976641 TTCGTTGACATCTCCTGCCT 59.023 50.000 0.00 0.00 0.00 4.75
2211 3720 3.436704 TGAATTTCGTTGACATCTCCTGC 59.563 43.478 0.00 0.00 0.00 4.85
2229 3738 2.361610 CCCAGCGGCCAGTTGAAT 60.362 61.111 2.24 0.00 32.33 2.57
2257 3766 7.448161 TGATTACTTGTCACCATTCTTGAACAT 59.552 33.333 0.00 0.00 0.00 2.71
2260 3769 7.223584 TCTGATTACTTGTCACCATTCTTGAA 58.776 34.615 0.00 0.00 0.00 2.69
2314 3823 6.371825 CCTCAACTGGAAACTCCACTTAATAC 59.628 42.308 0.00 0.00 42.67 1.89
2369 3878 0.867746 CCAATGGCATCGGATACACG 59.132 55.000 0.00 0.00 0.00 4.49
2478 3987 2.271497 CAAGCTGGCCAGGAGAGG 59.729 66.667 33.46 9.13 0.00 3.69
2491 4000 3.539604 AGGATGAACATACTCAGCAAGC 58.460 45.455 0.00 0.00 33.29 4.01
2500 4009 7.548196 TCCAACGAAAATAGGATGAACATAC 57.452 36.000 0.00 0.00 0.00 2.39
2508 4017 7.823745 ATTAGCAATCCAACGAAAATAGGAT 57.176 32.000 0.00 0.00 42.46 3.24
2520 4030 6.068010 CACCCTGGTATTATTAGCAATCCAA 58.932 40.000 0.00 0.00 35.52 3.53
2566 4076 5.367060 AGGTTCTTCAGGTTTCAGTAACTCT 59.633 40.000 0.00 0.00 36.93 3.24
2582 4092 4.161377 AGTCCTCTTATCTGCAGGTTCTTC 59.839 45.833 15.13 0.00 0.00 2.87
2589 4099 3.883830 ACACAGTCCTCTTATCTGCAG 57.116 47.619 7.63 7.63 33.12 4.41
2606 4116 6.258727 TGATTTGAAAGAGAGAGACACAACAC 59.741 38.462 0.00 0.00 0.00 3.32
2613 4123 7.961325 ACTTCTTGATTTGAAAGAGAGAGAC 57.039 36.000 0.00 0.00 35.20 3.36
2634 4148 6.016777 CAGTGCTAGAAATTTGACCAGAACTT 60.017 38.462 0.00 0.00 0.00 2.66
2644 4158 7.420800 AGAAAGTGAACAGTGCTAGAAATTTG 58.579 34.615 0.00 0.00 0.00 2.32
2653 4167 5.297029 GGTTTTAGAGAAAGTGAACAGTGCT 59.703 40.000 0.00 0.00 0.00 4.40
2654 4168 5.511571 GGTTTTAGAGAAAGTGAACAGTGC 58.488 41.667 0.00 0.00 0.00 4.40
2656 4170 5.293569 CACGGTTTTAGAGAAAGTGAACAGT 59.706 40.000 0.00 0.00 0.00 3.55
2670 4184 2.879646 TGCCACTAAACCACGGTTTTAG 59.120 45.455 18.79 15.03 44.84 1.85
2675 4189 0.107116 TTGTGCCACTAAACCACGGT 60.107 50.000 0.00 0.00 32.32 4.83
2708 4222 3.902150 TGTTGCGAGCTAGATATACTGC 58.098 45.455 0.00 0.00 0.00 4.40
2711 4225 6.436261 TGTTACTGTTGCGAGCTAGATATAC 58.564 40.000 0.00 0.00 0.00 1.47
2723 4237 2.927477 ACGGTATGATGTTACTGTTGCG 59.073 45.455 0.00 0.00 38.27 4.85
2731 4245 9.865321 GGAGCTATTAATAACGGTATGATGTTA 57.135 33.333 0.00 0.00 35.25 2.41
2732 4246 8.372459 TGGAGCTATTAATAACGGTATGATGTT 58.628 33.333 0.00 0.00 0.00 2.71
2733 4247 7.903145 TGGAGCTATTAATAACGGTATGATGT 58.097 34.615 0.00 0.00 0.00 3.06
2734 4248 8.251026 TCTGGAGCTATTAATAACGGTATGATG 58.749 37.037 0.00 0.00 0.00 3.07
2735 4249 8.362464 TCTGGAGCTATTAATAACGGTATGAT 57.638 34.615 0.00 0.00 0.00 2.45
2743 4610 7.841956 TGGCTAGATCTGGAGCTATTAATAAC 58.158 38.462 15.44 0.00 38.79 1.89
2747 4614 5.188555 CCATGGCTAGATCTGGAGCTATTAA 59.811 44.000 15.44 0.49 37.75 1.40
2779 4646 0.984230 CCCTGAAGCTACCTGGTTGA 59.016 55.000 12.54 0.00 36.40 3.18
2821 4689 1.422531 TTTCCTGTGGCAAAGGCATT 58.577 45.000 19.53 0.00 43.71 3.56
2864 4838 9.971744 GCATTTATTTGGTAAATTTCACATGAC 57.028 29.630 0.00 0.00 40.23 3.06
2869 4843 7.913674 TGGGCATTTATTTGGTAAATTTCAC 57.086 32.000 0.00 0.00 40.23 3.18
2905 4880 5.918608 AGTTCTTCACTAGCAAGTTCTTCA 58.081 37.500 0.00 0.00 31.97 3.02
2913 4888 5.645929 TGTTGTTGAAGTTCTTCACTAGCAA 59.354 36.000 13.79 12.90 32.94 3.91
2914 4889 5.182487 TGTTGTTGAAGTTCTTCACTAGCA 58.818 37.500 13.79 11.03 32.94 3.49
2915 4890 5.523916 TCTGTTGTTGAAGTTCTTCACTAGC 59.476 40.000 13.79 9.04 32.94 3.42
2966 4941 4.674362 GCTGACCGGAATTTTGGTTATCAC 60.674 45.833 9.46 0.00 38.99 3.06
2969 4944 3.192633 GTGCTGACCGGAATTTTGGTTAT 59.807 43.478 9.46 0.00 38.99 1.89
2979 4954 0.242825 CGTAAGAGTGCTGACCGGAA 59.757 55.000 9.46 0.00 43.02 4.30
3004 4980 9.283768 TCACACTCATGTACATTTCATAGTTTT 57.716 29.630 5.37 0.00 36.72 2.43
3017 4993 5.619981 GCCTCCAAAAATCACACTCATGTAC 60.620 44.000 0.00 0.00 36.72 2.90
3022 4998 2.942804 TGCCTCCAAAAATCACACTCA 58.057 42.857 0.00 0.00 0.00 3.41
3023 4999 4.051237 GTTTGCCTCCAAAAATCACACTC 58.949 43.478 0.00 0.00 42.19 3.51
3026 5002 4.378774 CATGTTTGCCTCCAAAAATCACA 58.621 39.130 0.00 0.00 42.19 3.58
3047 5023 3.517100 ACTAGATTTTCTGAGGCTGAGCA 59.483 43.478 6.82 0.00 0.00 4.26
3051 5027 5.724328 TGTGTACTAGATTTTCTGAGGCTG 58.276 41.667 0.00 0.00 0.00 4.85
3052 5028 6.382570 AGATGTGTACTAGATTTTCTGAGGCT 59.617 38.462 0.00 0.00 0.00 4.58
3053 5029 6.578023 AGATGTGTACTAGATTTTCTGAGGC 58.422 40.000 0.00 0.00 0.00 4.70
3059 5035 8.983724 GCCTGAATAGATGTGTACTAGATTTTC 58.016 37.037 0.00 0.00 0.00 2.29
3068 5061 6.460123 CCCAATTTGCCTGAATAGATGTGTAC 60.460 42.308 0.00 0.00 0.00 2.90
3071 5064 4.646040 TCCCAATTTGCCTGAATAGATGTG 59.354 41.667 0.00 0.00 0.00 3.21
3083 5076 1.487558 AGGCATGATTCCCAATTTGCC 59.512 47.619 5.54 5.54 44.42 4.52
3121 5114 6.657541 GTCTATTTGGGGAAATTGTACTGTCA 59.342 38.462 0.00 0.00 0.00 3.58
3131 5124 6.295292 GCTTGAACTTGTCTATTTGGGGAAAT 60.295 38.462 0.00 0.00 0.00 2.17
3186 5253 2.300152 CAGGTAGTGGTGTGATGTCAGT 59.700 50.000 0.00 0.00 0.00 3.41
3204 5271 4.878397 GTCTTATGTCTTCCATTGACCAGG 59.122 45.833 0.00 0.00 34.86 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.