Multiple sequence alignment - TraesCS5D01G477400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G477400 chr5D 100.000 5207 0 0 1 5207 516636297 516641503 0.000000e+00 9616.0
1 TraesCS5D01G477400 chr5D 80.000 185 27 6 343 522 516612010 516612189 1.520000e-25 128.0
2 TraesCS5D01G477400 chr5D 83.951 81 13 0 1802 1882 9227677 9227597 1.550000e-10 78.7
3 TraesCS5D01G477400 chr5B 91.538 4656 236 66 609 5207 648995964 649000518 0.000000e+00 6270.0
4 TraesCS5D01G477400 chr5A 93.598 2874 119 31 2368 5207 644103657 644106499 0.000000e+00 4228.0
5 TraesCS5D01G477400 chr5A 88.759 1539 123 24 609 2121 644097352 644098866 0.000000e+00 1838.0
6 TraesCS5D01G477400 chr5A 86.555 119 7 6 1 119 644097153 644097262 7.080000e-24 122.0
7 TraesCS5D01G477400 chr5A 98.333 60 1 0 2169 2228 644098884 644098943 7.130000e-19 106.0
8 TraesCS5D01G477400 chr1D 71.770 836 168 51 1088 1889 7073664 7074465 1.930000e-39 174.0
9 TraesCS5D01G477400 chr1B 72.005 843 154 63 1088 1889 9489987 9490788 1.930000e-39 174.0
10 TraesCS5D01G477400 chr1B 71.731 849 159 50 1097 1909 9579037 9579840 4.170000e-36 163.0
11 TraesCS5D01G477400 chr1B 81.250 192 26 8 1097 1285 9899283 9899099 4.200000e-31 147.0
12 TraesCS5D01G477400 chr1A 71.938 841 158 56 1088 1889 8665096 8665897 1.930000e-39 174.0
13 TraesCS5D01G477400 chr7A 84.211 76 12 0 1100 1175 6297606 6297681 2.010000e-09 75.0
14 TraesCS5D01G477400 chr6A 97.368 38 1 0 1116 1153 598926665 598926628 1.210000e-06 65.8
15 TraesCS5D01G477400 chr6B 90.196 51 2 2 1114 1161 687959396 687959446 4.350000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G477400 chr5D 516636297 516641503 5206 False 9616.000000 9616 100.000000 1 5207 1 chr5D.!!$F2 5206
1 TraesCS5D01G477400 chr5B 648995964 649000518 4554 False 6270.000000 6270 91.538000 609 5207 1 chr5B.!!$F1 4598
2 TraesCS5D01G477400 chr5A 644103657 644106499 2842 False 4228.000000 4228 93.598000 2368 5207 1 chr5A.!!$F1 2839
3 TraesCS5D01G477400 chr5A 644097153 644098943 1790 False 688.666667 1838 91.215667 1 2228 3 chr5A.!!$F2 2227

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
323 327 0.033601 AGCAGAGACGGAGATGGAGT 60.034 55.0 0.00 0.00 0.00 3.85 F
446 450 0.319900 TGCTTTCCTCGTGAGTCTGC 60.320 55.0 0.00 0.00 0.00 4.26 F
1654 1693 0.098200 CTACGCCTTCATCGTCGACA 59.902 55.0 17.16 3.13 40.89 4.35 F
1704 1743 0.179023 TGCTGCACATGGACAGAACA 60.179 50.0 18.38 7.25 35.90 3.18 F
2131 2176 0.769873 ACATGCATGGATCTCCTCCC 59.230 55.0 29.41 0.00 44.23 4.30 F
2735 2783 0.991146 TCCCACTGGCAGCAAAGATA 59.009 50.0 15.89 0.00 0.00 1.98 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1221 1257 0.100861 GTGGATCGACGGAGAGGTTC 59.899 60.0 0.00 0.0 0.00 3.62 R
1768 1807 0.108138 GCGTACTGATCTGCCCTGTT 60.108 55.0 0.00 0.0 0.00 3.16 R
2605 2653 0.883833 CGCACATTTTCCCTCTTGCT 59.116 50.0 0.00 0.0 0.00 3.91 R
2713 2761 0.971386 CTTTGCTGCCAGTGGGAAAT 59.029 50.0 12.15 0.0 35.59 2.17 R
3795 3849 0.804989 CAAGCCCGGTGTGATCTTTC 59.195 55.0 0.00 0.0 0.00 2.62 R
4316 4378 0.163788 CTGCAACAGACTTTACGGCG 59.836 55.0 4.80 4.8 32.44 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 4.708177 AGTGTCCTCATGCACATATTACC 58.292 43.478 0.00 0.00 38.02 2.85
76 77 3.494626 GTGTCCTCATGCACATATTACCG 59.505 47.826 0.00 0.00 35.81 4.02
82 83 4.702831 TCATGCACATATTACCGACACAT 58.297 39.130 0.00 0.00 0.00 3.21
83 84 5.848406 TCATGCACATATTACCGACACATA 58.152 37.500 0.00 0.00 0.00 2.29
84 85 5.694458 TCATGCACATATTACCGACACATAC 59.306 40.000 0.00 0.00 0.00 2.39
85 86 4.045783 TGCACATATTACCGACACATACG 58.954 43.478 0.00 0.00 0.00 3.06
86 87 4.202030 TGCACATATTACCGACACATACGA 60.202 41.667 0.00 0.00 0.00 3.43
87 88 4.921515 GCACATATTACCGACACATACGAT 59.078 41.667 0.00 0.00 0.00 3.73
88 89 5.404366 GCACATATTACCGACACATACGATT 59.596 40.000 0.00 0.00 0.00 3.34
89 90 6.073980 GCACATATTACCGACACATACGATTT 60.074 38.462 0.00 0.00 0.00 2.17
110 111 8.391106 CGATTTTAGCTACTCTAAGCAAACAAT 58.609 33.333 0.00 0.00 45.30 2.71
137 138 5.767816 AAAAAGATAGCCGACAAGTGTTT 57.232 34.783 0.00 0.00 0.00 2.83
138 139 5.767816 AAAAGATAGCCGACAAGTGTTTT 57.232 34.783 0.00 0.00 0.00 2.43
140 141 5.358298 AAGATAGCCGACAAGTGTTTTTC 57.642 39.130 0.00 0.00 0.00 2.29
142 143 5.063880 AGATAGCCGACAAGTGTTTTTCTT 58.936 37.500 0.00 0.00 0.00 2.52
143 144 5.531287 AGATAGCCGACAAGTGTTTTTCTTT 59.469 36.000 0.00 0.00 0.00 2.52
144 145 4.028852 AGCCGACAAGTGTTTTTCTTTC 57.971 40.909 0.00 0.00 0.00 2.62
145 146 2.781646 GCCGACAAGTGTTTTTCTTTCG 59.218 45.455 0.00 0.00 0.00 3.46
146 147 3.359654 CCGACAAGTGTTTTTCTTTCGG 58.640 45.455 0.00 0.00 38.17 4.30
147 148 3.181504 CCGACAAGTGTTTTTCTTTCGGT 60.182 43.478 14.55 0.00 38.75 4.69
148 149 4.408694 CGACAAGTGTTTTTCTTTCGGTT 58.591 39.130 0.00 0.00 0.00 4.44
149 150 4.494410 CGACAAGTGTTTTTCTTTCGGTTC 59.506 41.667 0.00 0.00 0.00 3.62
150 151 4.740268 ACAAGTGTTTTTCTTTCGGTTCC 58.260 39.130 0.00 0.00 0.00 3.62
151 152 4.218852 ACAAGTGTTTTTCTTTCGGTTCCA 59.781 37.500 0.00 0.00 0.00 3.53
152 153 5.164954 CAAGTGTTTTTCTTTCGGTTCCAA 58.835 37.500 0.00 0.00 0.00 3.53
153 154 5.592104 AGTGTTTTTCTTTCGGTTCCAAT 57.408 34.783 0.00 0.00 0.00 3.16
154 155 6.702716 AGTGTTTTTCTTTCGGTTCCAATA 57.297 33.333 0.00 0.00 0.00 1.90
155 156 7.284919 AGTGTTTTTCTTTCGGTTCCAATAT 57.715 32.000 0.00 0.00 0.00 1.28
156 157 8.398878 AGTGTTTTTCTTTCGGTTCCAATATA 57.601 30.769 0.00 0.00 0.00 0.86
157 158 9.020731 AGTGTTTTTCTTTCGGTTCCAATATAT 57.979 29.630 0.00 0.00 0.00 0.86
158 159 9.634163 GTGTTTTTCTTTCGGTTCCAATATATT 57.366 29.630 0.00 0.00 0.00 1.28
159 160 9.632807 TGTTTTTCTTTCGGTTCCAATATATTG 57.367 29.630 17.11 17.11 37.52 1.90
160 161 8.592155 GTTTTTCTTTCGGTTCCAATATATTGC 58.408 33.333 18.40 6.49 36.48 3.56
161 162 7.639113 TTTCTTTCGGTTCCAATATATTGCT 57.361 32.000 18.40 0.00 36.48 3.91
162 163 7.639113 TTCTTTCGGTTCCAATATATTGCTT 57.361 32.000 18.40 0.00 36.48 3.91
163 164 7.639113 TCTTTCGGTTCCAATATATTGCTTT 57.361 32.000 18.40 0.00 36.48 3.51
164 165 7.703328 TCTTTCGGTTCCAATATATTGCTTTC 58.297 34.615 18.40 8.99 36.48 2.62
165 166 6.385649 TTCGGTTCCAATATATTGCTTTCC 57.614 37.500 18.40 15.01 36.48 3.13
166 167 5.690865 TCGGTTCCAATATATTGCTTTCCT 58.309 37.500 18.40 0.00 36.48 3.36
167 168 5.763204 TCGGTTCCAATATATTGCTTTCCTC 59.237 40.000 18.40 5.56 36.48 3.71
168 169 5.765182 CGGTTCCAATATATTGCTTTCCTCT 59.235 40.000 18.40 0.00 36.48 3.69
169 170 6.073003 CGGTTCCAATATATTGCTTTCCTCTC 60.073 42.308 18.40 3.03 36.48 3.20
170 171 6.207614 GGTTCCAATATATTGCTTTCCTCTCC 59.792 42.308 18.40 7.37 36.48 3.71
171 172 6.514012 TCCAATATATTGCTTTCCTCTCCA 57.486 37.500 18.40 0.00 36.48 3.86
172 173 6.537355 TCCAATATATTGCTTTCCTCTCCAG 58.463 40.000 18.40 2.35 36.48 3.86
173 174 6.101734 TCCAATATATTGCTTTCCTCTCCAGT 59.898 38.462 18.40 0.00 36.48 4.00
174 175 6.429385 CCAATATATTGCTTTCCTCTCCAGTC 59.571 42.308 18.40 0.00 36.48 3.51
175 176 7.222872 CAATATATTGCTTTCCTCTCCAGTCT 58.777 38.462 12.38 0.00 0.00 3.24
176 177 2.847327 TTGCTTTCCTCTCCAGTCTG 57.153 50.000 0.00 0.00 0.00 3.51
177 178 1.722034 TGCTTTCCTCTCCAGTCTGT 58.278 50.000 0.00 0.00 0.00 3.41
178 179 2.889512 TGCTTTCCTCTCCAGTCTGTA 58.110 47.619 0.00 0.00 0.00 2.74
179 180 3.239449 TGCTTTCCTCTCCAGTCTGTAA 58.761 45.455 0.00 0.00 0.00 2.41
180 181 3.646162 TGCTTTCCTCTCCAGTCTGTAAA 59.354 43.478 0.00 0.00 0.00 2.01
181 182 4.287067 TGCTTTCCTCTCCAGTCTGTAAAT 59.713 41.667 0.00 0.00 0.00 1.40
182 183 5.483937 TGCTTTCCTCTCCAGTCTGTAAATA 59.516 40.000 0.00 0.00 0.00 1.40
183 184 6.045955 GCTTTCCTCTCCAGTCTGTAAATAG 58.954 44.000 0.00 0.00 0.00 1.73
184 185 6.351456 GCTTTCCTCTCCAGTCTGTAAATAGT 60.351 42.308 0.00 0.00 0.00 2.12
185 186 6.531503 TTCCTCTCCAGTCTGTAAATAGTG 57.468 41.667 0.00 0.00 0.00 2.74
186 187 5.580998 TCCTCTCCAGTCTGTAAATAGTGT 58.419 41.667 0.00 0.00 0.00 3.55
187 188 5.652891 TCCTCTCCAGTCTGTAAATAGTGTC 59.347 44.000 0.00 0.00 0.00 3.67
188 189 5.419155 CCTCTCCAGTCTGTAAATAGTGTCA 59.581 44.000 0.00 0.00 0.00 3.58
189 190 6.097554 CCTCTCCAGTCTGTAAATAGTGTCAT 59.902 42.308 0.00 0.00 0.00 3.06
190 191 7.364232 CCTCTCCAGTCTGTAAATAGTGTCATT 60.364 40.741 0.00 0.00 0.00 2.57
191 192 7.907389 TCTCCAGTCTGTAAATAGTGTCATTT 58.093 34.615 0.00 0.00 32.91 2.32
192 193 9.031537 TCTCCAGTCTGTAAATAGTGTCATTTA 57.968 33.333 0.00 0.00 30.84 1.40
193 194 8.997621 TCCAGTCTGTAAATAGTGTCATTTAC 57.002 34.615 10.40 10.40 45.45 2.01
194 195 8.812972 TCCAGTCTGTAAATAGTGTCATTTACT 58.187 33.333 15.77 0.00 45.45 2.24
195 196 9.436957 CCAGTCTGTAAATAGTGTCATTTACTT 57.563 33.333 15.77 2.29 45.45 2.24
214 215 8.925161 TTTACTTTTCATGTTATATGCTTGCC 57.075 30.769 0.00 0.00 0.00 4.52
215 216 6.528537 ACTTTTCATGTTATATGCTTGCCA 57.471 33.333 0.00 0.00 0.00 4.92
216 217 6.934056 ACTTTTCATGTTATATGCTTGCCAA 58.066 32.000 0.00 0.00 0.00 4.52
217 218 7.385267 ACTTTTCATGTTATATGCTTGCCAAA 58.615 30.769 0.00 0.00 0.00 3.28
218 219 7.877097 ACTTTTCATGTTATATGCTTGCCAAAA 59.123 29.630 0.00 0.00 0.00 2.44
219 220 8.613060 TTTTCATGTTATATGCTTGCCAAAAA 57.387 26.923 0.00 0.00 0.00 1.94
220 221 8.789825 TTTCATGTTATATGCTTGCCAAAAAT 57.210 26.923 0.00 0.00 0.00 1.82
221 222 9.881649 TTTCATGTTATATGCTTGCCAAAAATA 57.118 25.926 0.00 0.00 0.00 1.40
223 224 9.478768 TCATGTTATATGCTTGCCAAAAATATG 57.521 29.630 0.00 0.00 0.00 1.78
224 225 9.478768 CATGTTATATGCTTGCCAAAAATATGA 57.521 29.630 3.08 0.00 0.00 2.15
270 271 4.329462 AAATACCGCATTGTGTTTGGTT 57.671 36.364 0.00 0.00 34.18 3.67
285 289 7.881142 TGTGTTTGGTTTAACTATCTGAATGG 58.119 34.615 0.00 0.00 0.00 3.16
288 292 9.137459 TGTTTGGTTTAACTATCTGAATGGAAA 57.863 29.630 0.00 0.00 0.00 3.13
289 293 9.974980 GTTTGGTTTAACTATCTGAATGGAAAA 57.025 29.630 0.00 0.00 0.00 2.29
306 310 7.838771 ATGGAAAATAAGCTTTTCATTCAGC 57.161 32.000 3.20 0.00 39.48 4.26
307 311 6.757237 TGGAAAATAAGCTTTTCATTCAGCA 58.243 32.000 3.20 0.00 39.48 4.41
308 312 6.869913 TGGAAAATAAGCTTTTCATTCAGCAG 59.130 34.615 3.20 0.00 39.48 4.24
309 313 7.092716 GGAAAATAAGCTTTTCATTCAGCAGA 58.907 34.615 3.20 0.00 39.48 4.26
310 314 7.275123 GGAAAATAAGCTTTTCATTCAGCAGAG 59.725 37.037 3.20 0.00 39.48 3.35
311 315 7.458409 AAATAAGCTTTTCATTCAGCAGAGA 57.542 32.000 3.20 0.00 38.61 3.10
312 316 4.762956 AAGCTTTTCATTCAGCAGAGAC 57.237 40.909 0.00 0.00 38.61 3.36
313 317 2.740981 AGCTTTTCATTCAGCAGAGACG 59.259 45.455 0.00 0.00 38.61 4.18
314 318 2.159599 GCTTTTCATTCAGCAGAGACGG 60.160 50.000 0.00 0.00 35.95 4.79
315 319 3.329386 CTTTTCATTCAGCAGAGACGGA 58.671 45.455 0.00 0.00 0.00 4.69
316 320 2.662006 TTCATTCAGCAGAGACGGAG 57.338 50.000 0.00 0.00 0.00 4.63
317 321 1.839424 TCATTCAGCAGAGACGGAGA 58.161 50.000 0.00 0.00 0.00 3.71
318 322 2.382882 TCATTCAGCAGAGACGGAGAT 58.617 47.619 0.00 0.00 0.00 2.75
319 323 2.100418 TCATTCAGCAGAGACGGAGATG 59.900 50.000 0.00 0.00 0.00 2.90
320 324 0.820226 TTCAGCAGAGACGGAGATGG 59.180 55.000 0.00 0.00 0.00 3.51
321 325 0.034089 TCAGCAGAGACGGAGATGGA 60.034 55.000 0.00 0.00 0.00 3.41
322 326 0.385029 CAGCAGAGACGGAGATGGAG 59.615 60.000 0.00 0.00 0.00 3.86
323 327 0.033601 AGCAGAGACGGAGATGGAGT 60.034 55.000 0.00 0.00 0.00 3.85
324 328 1.213182 AGCAGAGACGGAGATGGAGTA 59.787 52.381 0.00 0.00 0.00 2.59
325 329 2.025155 GCAGAGACGGAGATGGAGTAA 58.975 52.381 0.00 0.00 0.00 2.24
326 330 2.427453 GCAGAGACGGAGATGGAGTAAA 59.573 50.000 0.00 0.00 0.00 2.01
327 331 3.735514 GCAGAGACGGAGATGGAGTAAAC 60.736 52.174 0.00 0.00 0.00 2.01
328 332 3.444034 CAGAGACGGAGATGGAGTAAACA 59.556 47.826 0.00 0.00 0.00 2.83
329 333 3.444388 AGAGACGGAGATGGAGTAAACAC 59.556 47.826 0.00 0.00 0.00 3.32
330 334 3.162666 AGACGGAGATGGAGTAAACACA 58.837 45.455 0.00 0.00 0.00 3.72
331 335 3.769844 AGACGGAGATGGAGTAAACACAT 59.230 43.478 0.00 0.00 0.00 3.21
332 336 4.223032 AGACGGAGATGGAGTAAACACATT 59.777 41.667 0.00 0.00 0.00 2.71
333 337 5.421056 AGACGGAGATGGAGTAAACACATTA 59.579 40.000 0.00 0.00 0.00 1.90
334 338 5.416947 ACGGAGATGGAGTAAACACATTAC 58.583 41.667 0.00 0.00 43.56 1.89
335 339 4.809426 CGGAGATGGAGTAAACACATTACC 59.191 45.833 0.00 0.00 44.17 2.85
336 340 4.809426 GGAGATGGAGTAAACACATTACCG 59.191 45.833 0.00 0.00 44.17 4.02
337 341 5.394883 GGAGATGGAGTAAACACATTACCGA 60.395 44.000 0.00 0.00 44.17 4.69
338 342 5.416947 AGATGGAGTAAACACATTACCGAC 58.583 41.667 0.00 0.00 44.17 4.79
339 343 3.577667 TGGAGTAAACACATTACCGACG 58.422 45.455 0.00 0.00 44.17 5.12
340 344 2.346545 GGAGTAAACACATTACCGACGC 59.653 50.000 0.00 0.00 44.17 5.19
341 345 2.988493 GAGTAAACACATTACCGACGCA 59.012 45.455 0.00 0.00 44.17 5.24
342 346 3.592059 AGTAAACACATTACCGACGCAT 58.408 40.909 0.00 0.00 44.17 4.73
343 347 4.746729 AGTAAACACATTACCGACGCATA 58.253 39.130 0.00 0.00 44.17 3.14
344 348 5.353938 AGTAAACACATTACCGACGCATAT 58.646 37.500 0.00 0.00 44.17 1.78
345 349 4.530094 AAACACATTACCGACGCATATG 57.470 40.909 0.00 0.00 0.00 1.78
346 350 3.446310 ACACATTACCGACGCATATGA 57.554 42.857 6.97 0.00 0.00 2.15
347 351 3.990092 ACACATTACCGACGCATATGAT 58.010 40.909 6.97 0.00 0.00 2.45
348 352 4.377021 ACACATTACCGACGCATATGATT 58.623 39.130 6.97 0.00 0.00 2.57
349 353 4.814234 ACACATTACCGACGCATATGATTT 59.186 37.500 6.97 0.00 0.00 2.17
350 354 5.295787 ACACATTACCGACGCATATGATTTT 59.704 36.000 6.97 0.00 0.00 1.82
351 355 6.480651 ACACATTACCGACGCATATGATTTTA 59.519 34.615 6.97 0.00 0.00 1.52
352 356 7.009440 CACATTACCGACGCATATGATTTTAG 58.991 38.462 6.97 0.00 0.00 1.85
353 357 5.585500 TTACCGACGCATATGATTTTAGC 57.415 39.130 6.97 0.00 0.00 3.09
354 358 3.728845 ACCGACGCATATGATTTTAGCT 58.271 40.909 6.97 0.00 0.00 3.32
355 359 4.878439 ACCGACGCATATGATTTTAGCTA 58.122 39.130 6.97 0.00 0.00 3.32
356 360 4.684703 ACCGACGCATATGATTTTAGCTAC 59.315 41.667 6.97 0.00 0.00 3.58
357 361 4.923871 CCGACGCATATGATTTTAGCTACT 59.076 41.667 6.97 0.00 0.00 2.57
358 362 5.061064 CCGACGCATATGATTTTAGCTACTC 59.939 44.000 6.97 0.00 0.00 2.59
359 363 5.859114 CGACGCATATGATTTTAGCTACTCT 59.141 40.000 6.97 0.00 0.00 3.24
360 364 7.021790 CGACGCATATGATTTTAGCTACTCTA 58.978 38.462 6.97 0.00 0.00 2.43
361 365 7.698550 CGACGCATATGATTTTAGCTACTCTAT 59.301 37.037 6.97 0.00 0.00 1.98
362 366 8.694975 ACGCATATGATTTTAGCTACTCTATG 57.305 34.615 6.97 3.54 0.00 2.23
363 367 7.276658 ACGCATATGATTTTAGCTACTCTATGC 59.723 37.037 6.97 17.91 36.95 3.14
364 368 7.276438 CGCATATGATTTTAGCTACTCTATGCA 59.724 37.037 21.88 0.00 39.06 3.96
365 369 8.939929 GCATATGATTTTAGCTACTCTATGCAA 58.060 33.333 6.97 3.18 38.99 4.08
368 372 8.737168 ATGATTTTAGCTACTCTATGCAAACA 57.263 30.769 0.00 0.00 0.00 2.83
369 373 8.560355 TGATTTTAGCTACTCTATGCAAACAA 57.440 30.769 0.00 0.00 0.00 2.83
370 374 9.177608 TGATTTTAGCTACTCTATGCAAACAAT 57.822 29.630 0.00 0.00 0.00 2.71
383 387 9.767684 TCTATGCAAACAATAATAAAGACAACG 57.232 29.630 0.00 0.00 0.00 4.10
384 388 9.554724 CTATGCAAACAATAATAAAGACAACGT 57.445 29.630 0.00 0.00 0.00 3.99
385 389 7.616103 TGCAAACAATAATAAAGACAACGTG 57.384 32.000 0.00 0.00 0.00 4.49
386 390 7.197017 TGCAAACAATAATAAAGACAACGTGT 58.803 30.769 0.00 0.00 0.00 4.49
387 391 7.702772 TGCAAACAATAATAAAGACAACGTGTT 59.297 29.630 0.00 0.00 0.00 3.32
388 392 8.536407 GCAAACAATAATAAAGACAACGTGTTT 58.464 29.630 0.00 0.00 37.19 2.83
389 393 9.828220 CAAACAATAATAAAGACAACGTGTTTG 57.172 29.630 10.06 10.06 43.69 2.93
390 394 7.617533 ACAATAATAAAGACAACGTGTTTGC 57.382 32.000 0.00 0.00 39.01 3.68
391 395 6.358558 ACAATAATAAAGACAACGTGTTTGCG 59.641 34.615 0.00 0.00 39.01 4.85
392 396 4.539509 AATAAAGACAACGTGTTTGCGA 57.460 36.364 0.00 0.00 39.01 5.10
393 397 2.904011 AAAGACAACGTGTTTGCGAA 57.096 40.000 0.00 0.00 39.01 4.70
394 398 2.452006 AAGACAACGTGTTTGCGAAG 57.548 45.000 0.00 0.00 39.01 3.79
395 399 0.655733 AGACAACGTGTTTGCGAAGG 59.344 50.000 0.00 0.00 39.01 3.46
396 400 0.928451 GACAACGTGTTTGCGAAGGC 60.928 55.000 0.00 0.00 39.01 4.35
397 401 1.657181 CAACGTGTTTGCGAAGGCC 60.657 57.895 0.00 0.00 38.85 5.19
398 402 3.175976 AACGTGTTTGCGAAGGCCG 62.176 57.895 0.00 0.00 38.85 6.13
399 403 3.342627 CGTGTTTGCGAAGGCCGA 61.343 61.111 0.00 0.00 41.76 5.54
400 404 2.251371 GTGTTTGCGAAGGCCGAC 59.749 61.111 0.00 0.00 41.76 4.79
401 405 2.203084 TGTTTGCGAAGGCCGACA 60.203 55.556 0.00 0.00 41.76 4.35
402 406 1.820056 TGTTTGCGAAGGCCGACAA 60.820 52.632 0.00 0.00 41.76 3.18
403 407 1.082104 GTTTGCGAAGGCCGACAAG 60.082 57.895 0.00 0.00 41.76 3.16
404 408 1.525077 TTTGCGAAGGCCGACAAGT 60.525 52.632 0.00 0.00 41.76 3.16
405 409 1.781025 TTTGCGAAGGCCGACAAGTG 61.781 55.000 0.00 0.00 41.76 3.16
406 410 2.665185 GCGAAGGCCGACAAGTGT 60.665 61.111 0.00 0.00 41.76 3.55
407 411 2.251642 GCGAAGGCCGACAAGTGTT 61.252 57.895 0.00 0.00 41.76 3.32
408 412 1.860078 CGAAGGCCGACAAGTGTTC 59.140 57.895 0.00 0.00 41.76 3.18
409 413 0.878523 CGAAGGCCGACAAGTGTTCA 60.879 55.000 0.00 0.00 41.76 3.18
410 414 0.868406 GAAGGCCGACAAGTGTTCAG 59.132 55.000 0.00 0.00 0.00 3.02
411 415 0.468226 AAGGCCGACAAGTGTTCAGA 59.532 50.000 0.00 0.00 0.00 3.27
412 416 0.687354 AGGCCGACAAGTGTTCAGAT 59.313 50.000 0.00 0.00 0.00 2.90
413 417 1.899814 AGGCCGACAAGTGTTCAGATA 59.100 47.619 0.00 0.00 0.00 1.98
414 418 2.000447 GGCCGACAAGTGTTCAGATAC 59.000 52.381 0.00 0.00 0.00 2.24
415 419 2.353803 GGCCGACAAGTGTTCAGATACT 60.354 50.000 0.00 0.00 0.00 2.12
416 420 3.119245 GGCCGACAAGTGTTCAGATACTA 60.119 47.826 0.00 0.00 0.00 1.82
417 421 4.441634 GGCCGACAAGTGTTCAGATACTAT 60.442 45.833 0.00 0.00 0.00 2.12
418 422 4.504461 GCCGACAAGTGTTCAGATACTATG 59.496 45.833 0.00 0.00 0.00 2.23
419 423 5.678871 GCCGACAAGTGTTCAGATACTATGA 60.679 44.000 0.00 0.00 0.00 2.15
420 424 6.507900 CCGACAAGTGTTCAGATACTATGAT 58.492 40.000 0.00 0.00 0.00 2.45
421 425 7.649057 CCGACAAGTGTTCAGATACTATGATA 58.351 38.462 0.00 0.00 0.00 2.15
422 426 8.300286 CCGACAAGTGTTCAGATACTATGATAT 58.700 37.037 0.00 0.00 0.00 1.63
438 442 8.582657 ACTATGATATATACTGCTTTCCTCGT 57.417 34.615 0.00 0.00 0.00 4.18
439 443 8.462811 ACTATGATATATACTGCTTTCCTCGTG 58.537 37.037 0.00 0.00 0.00 4.35
440 444 6.894339 TGATATATACTGCTTTCCTCGTGA 57.106 37.500 0.00 0.00 0.00 4.35
441 445 6.914259 TGATATATACTGCTTTCCTCGTGAG 58.086 40.000 0.00 0.00 0.00 3.51
442 446 6.490381 TGATATATACTGCTTTCCTCGTGAGT 59.510 38.462 0.00 0.00 0.00 3.41
443 447 3.512033 ATACTGCTTTCCTCGTGAGTC 57.488 47.619 0.00 0.00 0.00 3.36
444 448 1.333177 ACTGCTTTCCTCGTGAGTCT 58.667 50.000 0.00 0.00 0.00 3.24
445 449 1.000283 ACTGCTTTCCTCGTGAGTCTG 60.000 52.381 0.00 0.00 0.00 3.51
446 450 0.319900 TGCTTTCCTCGTGAGTCTGC 60.320 55.000 0.00 0.00 0.00 4.26
447 451 0.319900 GCTTTCCTCGTGAGTCTGCA 60.320 55.000 0.00 0.00 0.00 4.41
448 452 1.873903 GCTTTCCTCGTGAGTCTGCAA 60.874 52.381 0.00 0.00 0.00 4.08
449 453 2.483876 CTTTCCTCGTGAGTCTGCAAA 58.516 47.619 0.00 0.00 0.00 3.68
450 454 2.839486 TTCCTCGTGAGTCTGCAAAT 57.161 45.000 0.00 0.00 0.00 2.32
451 455 2.084610 TCCTCGTGAGTCTGCAAATG 57.915 50.000 0.00 0.00 0.00 2.32
452 456 1.081892 CCTCGTGAGTCTGCAAATGG 58.918 55.000 0.00 0.00 0.00 3.16
453 457 1.609061 CCTCGTGAGTCTGCAAATGGT 60.609 52.381 0.00 0.00 0.00 3.55
454 458 1.462283 CTCGTGAGTCTGCAAATGGTG 59.538 52.381 0.00 0.00 0.00 4.17
455 459 1.202639 TCGTGAGTCTGCAAATGGTGT 60.203 47.619 0.00 0.00 0.00 4.16
456 460 1.603802 CGTGAGTCTGCAAATGGTGTT 59.396 47.619 0.00 0.00 0.00 3.32
457 461 2.349817 CGTGAGTCTGCAAATGGTGTTC 60.350 50.000 0.00 0.00 0.00 3.18
458 462 2.618241 GTGAGTCTGCAAATGGTGTTCA 59.382 45.455 0.00 0.00 0.00 3.18
459 463 3.254166 GTGAGTCTGCAAATGGTGTTCAT 59.746 43.478 0.00 0.00 37.79 2.57
485 489 8.972458 TTACTTTTCATAGTATATGCTTGCCA 57.028 30.769 0.00 0.00 31.09 4.92
486 490 9.573166 TTACTTTTCATAGTATATGCTTGCCAT 57.427 29.630 0.00 0.00 37.97 4.40
488 492 9.573166 ACTTTTCATAGTATATGCTTGCCATAA 57.427 29.630 0.00 0.00 39.71 1.90
501 505 8.997621 ATGCTTGCCATAAAAATGATATGATC 57.002 30.769 0.00 0.00 33.49 2.92
502 506 7.953752 TGCTTGCCATAAAAATGATATGATCA 58.046 30.769 0.00 0.00 44.55 2.92
503 507 8.422566 TGCTTGCCATAAAAATGATATGATCAA 58.577 29.630 0.00 0.00 43.50 2.57
504 508 9.263538 GCTTGCCATAAAAATGATATGATCAAA 57.736 29.630 0.00 0.00 43.50 2.69
564 568 9.669887 AATAAAAATGCAATGTATGTGATTGGT 57.330 25.926 0.00 0.00 32.38 3.67
565 569 7.982761 AAAAATGCAATGTATGTGATTGGTT 57.017 28.000 0.00 0.00 32.38 3.67
566 570 7.982761 AAAATGCAATGTATGTGATTGGTTT 57.017 28.000 0.00 0.00 32.38 3.27
567 571 9.499479 AAAAATGCAATGTATGTGATTGGTTTA 57.501 25.926 0.00 0.00 32.38 2.01
568 572 9.499479 AAAATGCAATGTATGTGATTGGTTTAA 57.501 25.926 0.00 0.00 32.38 1.52
569 573 8.477984 AATGCAATGTATGTGATTGGTTTAAC 57.522 30.769 0.00 0.00 32.38 2.01
570 574 7.225784 TGCAATGTATGTGATTGGTTTAACT 57.774 32.000 0.00 0.00 32.38 2.24
571 575 8.341892 TGCAATGTATGTGATTGGTTTAACTA 57.658 30.769 0.00 0.00 32.38 2.24
572 576 8.965819 TGCAATGTATGTGATTGGTTTAACTAT 58.034 29.630 0.00 0.00 32.38 2.12
581 585 9.913310 TGTGATTGGTTTAACTATATGAATGGA 57.087 29.630 0.00 0.00 0.00 3.41
604 608 9.292195 TGGAAAGTAACCTTTTCATTTAGGTAG 57.708 33.333 0.00 0.00 43.88 3.18
605 609 9.511272 GGAAAGTAACCTTTTCATTTAGGTAGA 57.489 33.333 0.00 0.00 43.88 2.59
621 625 2.882137 GGTAGAGACGGAGATGGAGAAG 59.118 54.545 0.00 0.00 0.00 2.85
624 628 1.679153 GAGACGGAGATGGAGAAGGAC 59.321 57.143 0.00 0.00 0.00 3.85
628 633 1.686428 CGGAGATGGAGAAGGACAGGA 60.686 57.143 0.00 0.00 0.00 3.86
644 649 5.597182 AGGACAGGAGCATAAACGTAATCTA 59.403 40.000 0.00 0.00 0.00 1.98
648 653 6.757010 ACAGGAGCATAAACGTAATCTAGTTG 59.243 38.462 0.00 0.00 0.00 3.16
657 662 1.483415 GTAATCTAGTTGCCCCACGGA 59.517 52.381 0.00 0.00 0.00 4.69
664 669 2.144078 TTGCCCCACGGAGAAGTGA 61.144 57.895 0.00 0.00 44.43 3.41
673 678 1.975680 ACGGAGAAGTGAAGGGCTAAA 59.024 47.619 0.00 0.00 0.00 1.85
680 685 7.497909 CGGAGAAGTGAAGGGCTAAAAATATTA 59.502 37.037 0.00 0.00 0.00 0.98
735 740 2.345641 CGTTGAAGGTTCTGCATCTACG 59.654 50.000 5.58 5.58 35.48 3.51
758 764 0.667487 CGAGAGCGAAGTCTGGCAAA 60.667 55.000 0.00 0.00 40.82 3.68
765 771 2.143122 CGAAGTCTGGCAAAAGCTGTA 58.857 47.619 0.00 0.00 0.00 2.74
810 817 9.884465 GCATGCCTAACTTGATTAACTAATTAG 57.116 33.333 6.36 11.05 0.00 1.73
821 828 9.474313 TTGATTAACTAATTAGTTTCCCAGCAT 57.526 29.630 30.41 14.18 43.57 3.79
833 840 6.415573 AGTTTCCCAGCATAGTTAGTTAAGG 58.584 40.000 0.00 0.00 0.00 2.69
834 841 6.012771 AGTTTCCCAGCATAGTTAGTTAAGGT 60.013 38.462 0.00 0.00 0.00 3.50
851 858 3.164977 TGTGGTGAGGTCGGCCAA 61.165 61.111 9.71 0.00 37.19 4.52
852 859 2.668550 GTGGTGAGGTCGGCCAAC 60.669 66.667 9.71 6.01 37.19 3.77
919 928 1.230635 AAGACACGCCACAGCATCAC 61.231 55.000 0.00 0.00 39.83 3.06
923 932 0.744057 CACGCCACAGCATCACCATA 60.744 55.000 0.00 0.00 39.83 2.74
937 946 8.338259 CAGCATCACCATACTCTTGTATTTAAC 58.662 37.037 0.00 0.00 37.28 2.01
939 948 7.518370 GCATCACCATACTCTTGTATTTAACCG 60.518 40.741 0.00 0.00 37.28 4.44
980 989 2.180017 CTTCCATGCGTGCCAAGC 59.820 61.111 0.00 0.00 0.00 4.01
987 996 1.652012 TGCGTGCCAAGCAACTAAC 59.348 52.632 1.91 0.00 41.47 2.34
1050 1059 0.961857 TGCTCCTACTGCCGTCGTTA 60.962 55.000 0.00 0.00 0.00 3.18
1062 1071 1.423845 GTCGTTATTGGCAGCCACG 59.576 57.895 15.89 15.07 30.78 4.94
1064 1073 1.743623 CGTTATTGGCAGCCACGGA 60.744 57.895 15.89 0.00 30.78 4.69
1065 1074 1.705337 CGTTATTGGCAGCCACGGAG 61.705 60.000 15.89 0.73 30.78 4.63
1067 1076 2.550699 TTATTGGCAGCCACGGAGGG 62.551 60.000 15.89 0.00 38.09 4.30
1221 1257 1.375908 CACGTCCATCCAGGTGGTG 60.376 63.158 0.00 0.00 40.27 4.17
1323 1362 5.385396 GTACAGTGGTACGCAATATGAAC 57.615 43.478 0.00 0.00 44.14 3.18
1343 1382 0.784778 GACACGAGCTTCTTCAACCG 59.215 55.000 0.00 0.00 0.00 4.44
1350 1389 0.865769 GCTTCTTCAACCGCGAGAAA 59.134 50.000 8.23 0.00 0.00 2.52
1397 1436 0.396435 ATCTCCCACAAGCACAACGA 59.604 50.000 0.00 0.00 0.00 3.85
1441 1480 0.460109 CATCGGCATCGTGAAGACCA 60.460 55.000 0.00 0.00 37.69 4.02
1442 1481 0.249120 ATCGGCATCGTGAAGACCAA 59.751 50.000 0.00 0.00 37.69 3.67
1493 1532 2.334946 GCATGTCCTTCTGCCGCAA 61.335 57.895 0.00 0.00 32.15 4.85
1546 1585 1.211709 GCCGGGTGTTGCAACATAC 59.788 57.895 33.16 26.79 41.59 2.39
1597 1636 0.392998 CGAGTTCCCCAACATCAGGG 60.393 60.000 0.00 0.00 46.36 4.45
1608 1647 2.052104 CATCAGGGAAAACCGGCCC 61.052 63.158 0.00 3.45 46.96 5.80
1654 1693 0.098200 CTACGCCTTCATCGTCGACA 59.902 55.000 17.16 3.13 40.89 4.35
1688 1727 3.073735 CCAGAGCTCCGACCTGCT 61.074 66.667 10.93 0.00 42.82 4.24
1704 1743 0.179023 TGCTGCACATGGACAGAACA 60.179 50.000 18.38 7.25 35.90 3.18
1749 1788 1.891919 GGCTATCCGCGAAATGCCA 60.892 57.895 21.63 0.00 42.08 4.92
1772 1811 3.777925 CGCCGACGCCAAGAACAG 61.778 66.667 0.00 0.00 0.00 3.16
1886 1925 1.005867 GCAACCCGTACCTTGTCGA 60.006 57.895 0.00 0.00 0.00 4.20
2131 2176 0.769873 ACATGCATGGATCTCCTCCC 59.230 55.000 29.41 0.00 44.23 4.30
2137 2182 1.486997 ATGGATCTCCTCCCATGCCG 61.487 60.000 0.00 0.00 44.23 5.69
2143 2188 4.962836 CCTCCCATGCCGGCCATC 62.963 72.222 26.77 0.00 29.71 3.51
2215 2260 1.001406 CAAGGTCTTCCTCTCGCAACT 59.999 52.381 0.00 0.00 44.35 3.16
2230 2275 2.549754 CGCAACTTCTTCAACCAGACAT 59.450 45.455 0.00 0.00 0.00 3.06
2262 2307 1.300931 TTCACTGCTGACGTCCTGC 60.301 57.895 19.49 19.49 39.79 4.85
2268 2313 2.125753 CTGACGTCCTGCTCTGGC 60.126 66.667 14.12 0.00 39.26 4.85
2293 2338 2.208431 CCTGCACTCGATCCTCAATTC 58.792 52.381 0.00 0.00 0.00 2.17
2305 2350 6.263392 TCGATCCTCAATTCGATCTTAGAACT 59.737 38.462 0.00 0.00 39.29 3.01
2306 2351 6.920758 CGATCCTCAATTCGATCTTAGAACTT 59.079 38.462 0.00 0.00 37.55 2.66
2307 2352 7.436673 CGATCCTCAATTCGATCTTAGAACTTT 59.563 37.037 0.00 0.00 37.55 2.66
2308 2353 9.751542 GATCCTCAATTCGATCTTAGAACTTTA 57.248 33.333 0.00 0.00 33.53 1.85
2309 2354 9.757227 ATCCTCAATTCGATCTTAGAACTTTAG 57.243 33.333 0.00 0.00 0.00 1.85
2310 2355 8.967918 TCCTCAATTCGATCTTAGAACTTTAGA 58.032 33.333 0.00 0.00 0.00 2.10
2311 2356 9.587772 CCTCAATTCGATCTTAGAACTTTAGAA 57.412 33.333 0.00 0.00 0.00 2.10
2313 2358 9.088512 TCAATTCGATCTTAGAACTTTAGAAGC 57.911 33.333 0.00 0.00 0.00 3.86
2317 2362 5.751028 CGATCTTAGAACTTTAGAAGCCTGG 59.249 44.000 0.00 0.00 0.00 4.45
2403 2451 5.580691 CCTTCAACCTTTCCAAAAAGAACAC 59.419 40.000 0.00 0.00 43.90 3.32
2404 2452 5.730296 TCAACCTTTCCAAAAAGAACACA 57.270 34.783 0.00 0.00 43.90 3.72
2435 2483 7.807977 ACATCAATATATTGTTGGGACAGTC 57.192 36.000 28.01 0.00 40.19 3.51
2579 2627 5.335426 GCATTCCGCAGATATCAATGAATGT 60.335 40.000 23.43 3.61 39.63 2.71
2583 2631 4.512571 CCGCAGATATCAATGAATGTGACA 59.487 41.667 5.32 0.00 0.00 3.58
2590 2638 9.623000 AGATATCAATGAATGTGACAATCAAGA 57.377 29.630 7.49 9.15 26.69 3.02
2604 2652 5.189180 ACAATCAAGAGAAGTATCCTTGCC 58.811 41.667 0.00 0.00 35.53 4.52
2605 2653 5.188434 CAATCAAGAGAAGTATCCTTGCCA 58.812 41.667 0.00 0.00 35.53 4.92
2609 2657 2.573462 AGAGAAGTATCCTTGCCAGCAA 59.427 45.455 4.78 4.78 0.00 3.91
2642 2690 2.991190 TGCGAACAACGAAGGATCTTAC 59.009 45.455 0.00 0.00 45.77 2.34
2643 2691 2.991190 GCGAACAACGAAGGATCTTACA 59.009 45.455 0.00 0.00 45.77 2.41
2671 2719 1.607628 CTGTCCTCCGGGTTATCGTAG 59.392 57.143 0.00 0.00 0.00 3.51
2699 2747 5.761234 TGACGCCAAAATAGAAAAGTGTACT 59.239 36.000 0.00 0.00 0.00 2.73
2713 2761 9.457436 AGAAAAGTGTACTTTACTTCCTTCAAA 57.543 29.630 10.15 0.00 44.69 2.69
2735 2783 0.991146 TCCCACTGGCAGCAAAGATA 59.009 50.000 15.89 0.00 0.00 1.98
3054 3108 9.301153 CCAAATGGTATAGCTAATTGTTGTTTC 57.699 33.333 0.00 0.00 0.00 2.78
3103 3157 7.998383 TGCCTGTCCACTTTGTATTATCAATAT 59.002 33.333 0.00 0.00 0.00 1.28
3170 3224 8.890124 ATATCTCTATGCATGATCATTGTAGC 57.110 34.615 10.16 7.13 0.00 3.58
3217 3271 2.787601 TGTTGCTCTACTTTCGACGT 57.212 45.000 0.00 0.00 0.00 4.34
3441 3495 9.626045 GTAAAAACCTCCATCAAGATAAACAAG 57.374 33.333 0.00 0.00 0.00 3.16
3516 3570 6.072342 TCCACAAGAACATCATCAAACTCATG 60.072 38.462 0.00 0.00 0.00 3.07
3762 3816 5.070180 TGAAAAGAACATGCCCAAAATCTCA 59.930 36.000 0.00 0.00 0.00 3.27
3795 3849 6.128526 GGACATCGAAGTTTCTTACAAAGGAG 60.129 42.308 0.00 0.00 0.00 3.69
3894 3948 7.011482 ACACAGAAGAGTGATGTTTACAACTTC 59.989 37.037 0.57 0.00 42.05 3.01
4026 4080 5.220265 GGCAATGTTTGACAAAGATATTGCG 60.220 40.000 28.57 13.79 45.79 4.85
4029 4083 5.041951 TGTTTGACAAAGATATTGCGACC 57.958 39.130 0.00 0.00 0.00 4.79
4030 4084 4.517075 TGTTTGACAAAGATATTGCGACCA 59.483 37.500 0.00 0.00 0.00 4.02
4066 4120 4.411540 ACATACTGGAAGAGATTGGCAGAT 59.588 41.667 0.00 0.00 37.43 2.90
4246 4307 8.331742 GCATTGCTTCTGAGATTAGTTAACTAC 58.668 37.037 14.96 5.08 0.00 2.73
4248 4309 9.810545 ATTGCTTCTGAGATTAGTTAACTACTC 57.189 33.333 20.00 20.00 38.33 2.59
4249 4310 8.349568 TGCTTCTGAGATTAGTTAACTACTCA 57.650 34.615 25.99 24.91 38.33 3.41
4250 4311 8.803235 TGCTTCTGAGATTAGTTAACTACTCAA 58.197 33.333 25.99 16.12 38.33 3.02
4320 4382 1.483316 TTGACTATTGTATCGCGCCG 58.517 50.000 0.00 0.00 0.00 6.46
4352 4414 7.443879 TCTGTTGCAGTGAATAGTTATCAAACA 59.556 33.333 0.00 0.00 33.96 2.83
4376 4438 2.812011 CCTGGTAGCTTTGTTGGTGTAC 59.188 50.000 0.00 0.00 0.00 2.90
4433 4495 8.581578 TGTACACTAGTTCTGAATGACAACATA 58.418 33.333 0.00 0.00 35.50 2.29
4461 4523 3.209410 GACATCTGCCTGGAGTAAATGG 58.791 50.000 0.00 0.00 0.00 3.16
4494 4556 2.290641 AGTTTTCTTGACGGCATGTGAC 59.709 45.455 3.80 2.26 0.00 3.67
4536 4600 4.142966 CCTTTTAGGATTGTCGAAACCGAC 60.143 45.833 10.60 10.60 46.11 4.79
4594 4663 2.233676 ACGACACTGTGATGCATAGGAA 59.766 45.455 15.86 0.00 0.00 3.36
4595 4664 2.604914 CGACACTGTGATGCATAGGAAC 59.395 50.000 15.86 0.00 0.00 3.62
4596 4665 3.599343 GACACTGTGATGCATAGGAACA 58.401 45.455 15.86 1.43 0.00 3.18
4597 4666 4.194640 GACACTGTGATGCATAGGAACAT 58.805 43.478 15.86 0.00 0.00 2.71
4598 4667 4.592942 ACACTGTGATGCATAGGAACATT 58.407 39.130 15.86 0.00 0.00 2.71
4599 4668 4.397103 ACACTGTGATGCATAGGAACATTG 59.603 41.667 15.86 9.22 0.00 2.82
4600 4669 4.397103 CACTGTGATGCATAGGAACATTGT 59.603 41.667 0.00 0.00 0.00 2.71
4601 4670 4.637534 ACTGTGATGCATAGGAACATTGTC 59.362 41.667 0.00 0.00 0.00 3.18
4602 4671 3.622612 TGTGATGCATAGGAACATTGTCG 59.377 43.478 0.00 0.00 0.00 4.35
4603 4672 3.623060 GTGATGCATAGGAACATTGTCGT 59.377 43.478 0.00 0.00 0.00 4.34
4604 4673 3.622612 TGATGCATAGGAACATTGTCGTG 59.377 43.478 0.00 0.00 0.00 4.35
4605 4674 3.052455 TGCATAGGAACATTGTCGTGT 57.948 42.857 0.00 0.00 0.00 4.49
4606 4675 2.741517 TGCATAGGAACATTGTCGTGTG 59.258 45.455 0.00 0.00 31.49 3.82
4607 4676 2.742053 GCATAGGAACATTGTCGTGTGT 59.258 45.455 0.00 0.00 31.49 3.72
4608 4677 3.930229 GCATAGGAACATTGTCGTGTGTA 59.070 43.478 0.00 0.00 31.49 2.90
4609 4678 4.390603 GCATAGGAACATTGTCGTGTGTAA 59.609 41.667 0.00 0.00 31.49 2.41
4610 4679 5.106869 GCATAGGAACATTGTCGTGTGTAAA 60.107 40.000 0.00 0.00 31.49 2.01
4611 4680 6.403200 GCATAGGAACATTGTCGTGTGTAAAT 60.403 38.462 0.00 0.00 31.49 1.40
4612 4681 5.607119 AGGAACATTGTCGTGTGTAAATC 57.393 39.130 0.00 0.00 31.49 2.17
4613 4682 4.454504 AGGAACATTGTCGTGTGTAAATCC 59.545 41.667 0.00 0.00 31.49 3.01
4614 4683 4.454504 GGAACATTGTCGTGTGTAAATCCT 59.545 41.667 0.00 0.00 31.49 3.24
4615 4684 5.390567 GGAACATTGTCGTGTGTAAATCCTC 60.391 44.000 0.00 0.00 31.49 3.71
4616 4685 4.000988 ACATTGTCGTGTGTAAATCCTCC 58.999 43.478 0.00 0.00 0.00 4.30
4617 4686 2.754946 TGTCGTGTGTAAATCCTCCC 57.245 50.000 0.00 0.00 0.00 4.30
4621 4690 4.098960 TGTCGTGTGTAAATCCTCCCTATC 59.901 45.833 0.00 0.00 0.00 2.08
4680 4749 2.420642 GAGCAGTTGAAGATGCACTGA 58.579 47.619 2.72 0.00 45.01 3.41
4752 4823 8.309656 TGCTACAATATATCAGGAATCACAGAG 58.690 37.037 0.00 0.00 0.00 3.35
4851 4922 8.671384 TCTAACAATAAATTAAGGGTCATCCG 57.329 34.615 0.00 0.00 41.52 4.18
5029 5102 2.635229 CTAAGTGCCGAGCAGCCGAT 62.635 60.000 4.99 0.00 40.08 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 4.684242 CGTATGTGTCGGTAATATGTGCAT 59.316 41.667 0.00 0.00 0.00 3.96
75 76 6.200100 AGAGTAGCTAAAATCGTATGTGTCG 58.800 40.000 0.00 0.00 0.00 4.35
76 77 9.171701 CTTAGAGTAGCTAAAATCGTATGTGTC 57.828 37.037 0.00 0.00 38.56 3.67
82 83 8.030692 TGTTTGCTTAGAGTAGCTAAAATCGTA 58.969 33.333 0.00 0.00 41.76 3.43
83 84 6.872020 TGTTTGCTTAGAGTAGCTAAAATCGT 59.128 34.615 0.00 0.00 41.76 3.73
84 85 7.290857 TGTTTGCTTAGAGTAGCTAAAATCG 57.709 36.000 0.00 0.00 41.76 3.34
119 120 4.642429 AGAAAAACACTTGTCGGCTATCT 58.358 39.130 0.00 0.00 0.00 1.98
120 121 5.358298 AAGAAAAACACTTGTCGGCTATC 57.642 39.130 0.00 0.00 0.00 2.08
123 124 3.486875 CGAAAGAAAAACACTTGTCGGCT 60.487 43.478 0.00 0.00 31.46 5.52
124 125 2.781646 CGAAAGAAAAACACTTGTCGGC 59.218 45.455 0.00 0.00 31.46 5.54
126 127 4.011058 ACCGAAAGAAAAACACTTGTCG 57.989 40.909 0.00 0.00 33.01 4.35
129 130 4.739195 TGGAACCGAAAGAAAAACACTTG 58.261 39.130 0.00 0.00 0.00 3.16
130 131 5.394224 TTGGAACCGAAAGAAAAACACTT 57.606 34.783 0.00 0.00 0.00 3.16
131 132 5.592104 ATTGGAACCGAAAGAAAAACACT 57.408 34.783 0.00 0.00 0.00 3.55
133 134 9.632807 CAATATATTGGAACCGAAAGAAAAACA 57.367 29.630 16.41 0.00 34.22 2.83
135 136 8.527810 AGCAATATATTGGAACCGAAAGAAAAA 58.472 29.630 23.57 0.00 38.21 1.94
137 138 7.639113 AGCAATATATTGGAACCGAAAGAAA 57.361 32.000 23.57 0.00 38.21 2.52
138 139 7.639113 AAGCAATATATTGGAACCGAAAGAA 57.361 32.000 23.57 0.00 38.21 2.52
140 141 6.918022 GGAAAGCAATATATTGGAACCGAAAG 59.082 38.462 23.57 0.00 38.21 2.62
142 143 6.126409 AGGAAAGCAATATATTGGAACCGAA 58.874 36.000 23.57 0.00 38.21 4.30
143 144 5.690865 AGGAAAGCAATATATTGGAACCGA 58.309 37.500 23.57 0.00 38.21 4.69
144 145 5.765182 AGAGGAAAGCAATATATTGGAACCG 59.235 40.000 23.57 1.31 38.21 4.44
145 146 6.207614 GGAGAGGAAAGCAATATATTGGAACC 59.792 42.308 23.57 9.51 38.21 3.62
146 147 6.772716 TGGAGAGGAAAGCAATATATTGGAAC 59.227 38.462 23.57 9.82 38.21 3.62
147 148 6.910191 TGGAGAGGAAAGCAATATATTGGAA 58.090 36.000 23.57 0.00 38.21 3.53
148 149 6.101734 ACTGGAGAGGAAAGCAATATATTGGA 59.898 38.462 23.57 0.00 38.21 3.53
149 150 6.302269 ACTGGAGAGGAAAGCAATATATTGG 58.698 40.000 23.57 8.58 38.21 3.16
150 151 7.172875 CAGACTGGAGAGGAAAGCAATATATTG 59.827 40.741 19.29 19.29 40.66 1.90
151 152 7.147408 ACAGACTGGAGAGGAAAGCAATATATT 60.147 37.037 7.51 0.00 0.00 1.28
152 153 6.328672 ACAGACTGGAGAGGAAAGCAATATAT 59.671 38.462 7.51 0.00 0.00 0.86
153 154 5.663106 ACAGACTGGAGAGGAAAGCAATATA 59.337 40.000 7.51 0.00 0.00 0.86
154 155 4.472833 ACAGACTGGAGAGGAAAGCAATAT 59.527 41.667 7.51 0.00 0.00 1.28
155 156 3.840666 ACAGACTGGAGAGGAAAGCAATA 59.159 43.478 7.51 0.00 0.00 1.90
156 157 2.641815 ACAGACTGGAGAGGAAAGCAAT 59.358 45.455 7.51 0.00 0.00 3.56
157 158 2.050144 ACAGACTGGAGAGGAAAGCAA 58.950 47.619 7.51 0.00 0.00 3.91
158 159 1.722034 ACAGACTGGAGAGGAAAGCA 58.278 50.000 7.51 0.00 0.00 3.91
159 160 3.963428 TTACAGACTGGAGAGGAAAGC 57.037 47.619 7.51 0.00 0.00 3.51
160 161 7.038659 CACTATTTACAGACTGGAGAGGAAAG 58.961 42.308 7.51 0.00 0.00 2.62
161 162 6.497259 ACACTATTTACAGACTGGAGAGGAAA 59.503 38.462 7.51 0.00 0.00 3.13
162 163 6.017192 ACACTATTTACAGACTGGAGAGGAA 58.983 40.000 7.51 0.00 0.00 3.36
163 164 5.580998 ACACTATTTACAGACTGGAGAGGA 58.419 41.667 7.51 0.00 0.00 3.71
164 165 5.419155 TGACACTATTTACAGACTGGAGAGG 59.581 44.000 7.51 0.00 0.00 3.69
165 166 6.516739 TGACACTATTTACAGACTGGAGAG 57.483 41.667 7.51 2.03 0.00 3.20
166 167 7.482169 AATGACACTATTTACAGACTGGAGA 57.518 36.000 7.51 0.00 0.00 3.71
167 168 9.088512 GTAAATGACACTATTTACAGACTGGAG 57.911 37.037 7.51 0.00 45.86 3.86
168 169 8.997621 GTAAATGACACTATTTACAGACTGGA 57.002 34.615 7.51 0.00 45.86 3.86
188 189 9.533253 GGCAAGCATATAACATGAAAAGTAAAT 57.467 29.630 0.00 0.00 0.00 1.40
189 190 8.526978 TGGCAAGCATATAACATGAAAAGTAAA 58.473 29.630 0.00 0.00 0.00 2.01
190 191 8.060931 TGGCAAGCATATAACATGAAAAGTAA 57.939 30.769 0.00 0.00 0.00 2.24
191 192 7.637631 TGGCAAGCATATAACATGAAAAGTA 57.362 32.000 0.00 0.00 0.00 2.24
192 193 6.528537 TGGCAAGCATATAACATGAAAAGT 57.471 33.333 0.00 0.00 0.00 2.66
193 194 7.830940 TTTGGCAAGCATATAACATGAAAAG 57.169 32.000 0.00 0.00 0.00 2.27
194 195 8.613060 TTTTTGGCAAGCATATAACATGAAAA 57.387 26.923 0.00 0.00 0.00 2.29
195 196 8.789825 ATTTTTGGCAAGCATATAACATGAAA 57.210 26.923 0.00 0.00 0.00 2.69
197 198 9.478768 CATATTTTTGGCAAGCATATAACATGA 57.521 29.630 0.00 0.00 0.00 3.07
198 199 9.478768 TCATATTTTTGGCAAGCATATAACATG 57.521 29.630 0.00 0.00 0.00 3.21
206 207 8.590204 TGATCATATCATATTTTTGGCAAGCAT 58.410 29.630 0.00 0.00 33.59 3.79
207 208 7.953752 TGATCATATCATATTTTTGGCAAGCA 58.046 30.769 0.00 0.00 33.59 3.91
208 209 8.821147 TTGATCATATCATATTTTTGGCAAGC 57.179 30.769 0.00 0.00 39.39 4.01
246 247 4.509600 ACCAAACACAATGCGGTATTTTTG 59.490 37.500 7.20 7.20 0.00 2.44
248 249 4.329462 ACCAAACACAATGCGGTATTTT 57.671 36.364 0.00 0.00 0.00 1.82
251 252 5.010213 AGTTAAACCAAACACAATGCGGTAT 59.990 36.000 0.00 0.00 0.00 2.73
254 255 3.712187 AGTTAAACCAAACACAATGCGG 58.288 40.909 0.00 0.00 0.00 5.69
259 260 8.356657 CCATTCAGATAGTTAAACCAAACACAA 58.643 33.333 0.00 0.00 0.00 3.33
285 289 8.025445 TCTCTGCTGAATGAAAAGCTTATTTTC 58.975 33.333 0.00 0.25 40.21 2.29
288 292 6.402983 CGTCTCTGCTGAATGAAAAGCTTATT 60.403 38.462 0.00 0.00 40.21 1.40
289 293 5.064452 CGTCTCTGCTGAATGAAAAGCTTAT 59.936 40.000 0.00 0.00 40.21 1.73
290 294 4.389992 CGTCTCTGCTGAATGAAAAGCTTA 59.610 41.667 0.00 0.00 40.21 3.09
291 295 3.188048 CGTCTCTGCTGAATGAAAAGCTT 59.812 43.478 0.00 0.00 40.21 3.74
292 296 2.740981 CGTCTCTGCTGAATGAAAAGCT 59.259 45.455 0.00 0.00 40.21 3.74
293 297 2.159599 CCGTCTCTGCTGAATGAAAAGC 60.160 50.000 0.00 0.00 39.96 3.51
294 298 3.329386 TCCGTCTCTGCTGAATGAAAAG 58.671 45.455 0.00 0.00 0.00 2.27
295 299 3.006859 TCTCCGTCTCTGCTGAATGAAAA 59.993 43.478 0.00 0.00 0.00 2.29
296 300 2.562738 TCTCCGTCTCTGCTGAATGAAA 59.437 45.455 0.00 0.00 0.00 2.69
297 301 2.171003 TCTCCGTCTCTGCTGAATGAA 58.829 47.619 0.00 0.00 0.00 2.57
298 302 1.839424 TCTCCGTCTCTGCTGAATGA 58.161 50.000 0.00 0.00 0.00 2.57
299 303 2.471818 CATCTCCGTCTCTGCTGAATG 58.528 52.381 0.00 0.00 0.00 2.67
300 304 1.411977 CCATCTCCGTCTCTGCTGAAT 59.588 52.381 0.00 0.00 0.00 2.57
301 305 0.820226 CCATCTCCGTCTCTGCTGAA 59.180 55.000 0.00 0.00 0.00 3.02
302 306 0.034089 TCCATCTCCGTCTCTGCTGA 60.034 55.000 0.00 0.00 0.00 4.26
303 307 0.385029 CTCCATCTCCGTCTCTGCTG 59.615 60.000 0.00 0.00 0.00 4.41
304 308 0.033601 ACTCCATCTCCGTCTCTGCT 60.034 55.000 0.00 0.00 0.00 4.24
305 309 1.681538 TACTCCATCTCCGTCTCTGC 58.318 55.000 0.00 0.00 0.00 4.26
306 310 3.444034 TGTTTACTCCATCTCCGTCTCTG 59.556 47.826 0.00 0.00 0.00 3.35
307 311 3.444388 GTGTTTACTCCATCTCCGTCTCT 59.556 47.826 0.00 0.00 0.00 3.10
308 312 3.192844 TGTGTTTACTCCATCTCCGTCTC 59.807 47.826 0.00 0.00 0.00 3.36
309 313 3.162666 TGTGTTTACTCCATCTCCGTCT 58.837 45.455 0.00 0.00 0.00 4.18
310 314 3.587797 TGTGTTTACTCCATCTCCGTC 57.412 47.619 0.00 0.00 0.00 4.79
311 315 4.553330 AATGTGTTTACTCCATCTCCGT 57.447 40.909 0.00 0.00 0.00 4.69
312 316 4.809426 GGTAATGTGTTTACTCCATCTCCG 59.191 45.833 0.00 0.00 40.14 4.63
313 317 4.809426 CGGTAATGTGTTTACTCCATCTCC 59.191 45.833 0.00 0.00 40.14 3.71
314 318 5.519206 GTCGGTAATGTGTTTACTCCATCTC 59.481 44.000 0.00 0.00 40.14 2.75
315 319 5.416947 GTCGGTAATGTGTTTACTCCATCT 58.583 41.667 0.00 0.00 40.14 2.90
316 320 4.266976 CGTCGGTAATGTGTTTACTCCATC 59.733 45.833 0.00 0.00 40.14 3.51
317 321 4.178540 CGTCGGTAATGTGTTTACTCCAT 58.821 43.478 0.00 0.00 40.14 3.41
318 322 3.577667 CGTCGGTAATGTGTTTACTCCA 58.422 45.455 0.00 0.00 40.14 3.86
319 323 2.346545 GCGTCGGTAATGTGTTTACTCC 59.653 50.000 0.00 0.00 40.14 3.85
320 324 2.988493 TGCGTCGGTAATGTGTTTACTC 59.012 45.455 0.00 0.00 40.14 2.59
321 325 3.029320 TGCGTCGGTAATGTGTTTACT 57.971 42.857 0.00 0.00 40.14 2.24
322 326 5.232626 TCATATGCGTCGGTAATGTGTTTAC 59.767 40.000 0.00 0.00 39.64 2.01
323 327 5.349809 TCATATGCGTCGGTAATGTGTTTA 58.650 37.500 0.00 0.00 0.00 2.01
324 328 4.185394 TCATATGCGTCGGTAATGTGTTT 58.815 39.130 0.00 0.00 0.00 2.83
325 329 3.787785 TCATATGCGTCGGTAATGTGTT 58.212 40.909 0.00 0.00 0.00 3.32
326 330 3.446310 TCATATGCGTCGGTAATGTGT 57.554 42.857 0.00 0.00 0.00 3.72
327 331 4.990543 AATCATATGCGTCGGTAATGTG 57.009 40.909 0.00 0.00 0.00 3.21
328 332 6.347402 GCTAAAATCATATGCGTCGGTAATGT 60.347 38.462 0.00 0.00 0.00 2.71
329 333 6.015504 GCTAAAATCATATGCGTCGGTAATG 58.984 40.000 0.00 0.00 0.00 1.90
330 334 5.932303 AGCTAAAATCATATGCGTCGGTAAT 59.068 36.000 0.00 0.00 0.00 1.89
331 335 5.294356 AGCTAAAATCATATGCGTCGGTAA 58.706 37.500 0.00 0.00 0.00 2.85
332 336 4.878439 AGCTAAAATCATATGCGTCGGTA 58.122 39.130 0.00 0.00 0.00 4.02
333 337 3.728845 AGCTAAAATCATATGCGTCGGT 58.271 40.909 0.00 0.00 0.00 4.69
334 338 4.923871 AGTAGCTAAAATCATATGCGTCGG 59.076 41.667 0.00 0.00 0.00 4.79
335 339 5.859114 AGAGTAGCTAAAATCATATGCGTCG 59.141 40.000 0.00 0.00 0.00 5.12
336 340 8.802856 CATAGAGTAGCTAAAATCATATGCGTC 58.197 37.037 0.00 0.00 31.66 5.19
337 341 7.276658 GCATAGAGTAGCTAAAATCATATGCGT 59.723 37.037 17.89 0.00 35.26 5.24
338 342 7.276438 TGCATAGAGTAGCTAAAATCATATGCG 59.724 37.037 21.74 0.00 43.58 4.73
339 343 8.484641 TGCATAGAGTAGCTAAAATCATATGC 57.515 34.615 21.24 21.24 41.94 3.14
342 346 9.830975 TGTTTGCATAGAGTAGCTAAAATCATA 57.169 29.630 0.00 0.00 31.66 2.15
343 347 8.737168 TGTTTGCATAGAGTAGCTAAAATCAT 57.263 30.769 0.00 0.00 31.66 2.45
344 348 8.560355 TTGTTTGCATAGAGTAGCTAAAATCA 57.440 30.769 0.00 0.00 31.66 2.57
357 361 9.767684 CGTTGTCTTTATTATTGTTTGCATAGA 57.232 29.630 0.00 0.00 0.00 1.98
358 362 9.554724 ACGTTGTCTTTATTATTGTTTGCATAG 57.445 29.630 0.00 0.00 0.00 2.23
359 363 9.335891 CACGTTGTCTTTATTATTGTTTGCATA 57.664 29.630 0.00 0.00 0.00 3.14
360 364 7.865385 ACACGTTGTCTTTATTATTGTTTGCAT 59.135 29.630 0.00 0.00 0.00 3.96
361 365 7.197017 ACACGTTGTCTTTATTATTGTTTGCA 58.803 30.769 0.00 0.00 0.00 4.08
362 366 7.617533 ACACGTTGTCTTTATTATTGTTTGC 57.382 32.000 0.00 0.00 0.00 3.68
363 367 9.828220 CAAACACGTTGTCTTTATTATTGTTTG 57.172 29.630 8.48 8.48 42.60 2.93
364 368 8.536407 GCAAACACGTTGTCTTTATTATTGTTT 58.464 29.630 0.00 0.00 39.63 2.83
365 369 7.096803 CGCAAACACGTTGTCTTTATTATTGTT 60.097 33.333 0.00 0.00 39.63 2.83
366 370 6.358558 CGCAAACACGTTGTCTTTATTATTGT 59.641 34.615 0.00 0.00 39.63 2.71
367 371 6.575572 TCGCAAACACGTTGTCTTTATTATTG 59.424 34.615 0.00 0.00 39.63 1.90
368 372 6.660722 TCGCAAACACGTTGTCTTTATTATT 58.339 32.000 0.00 0.00 39.63 1.40
369 373 6.230849 TCGCAAACACGTTGTCTTTATTAT 57.769 33.333 0.00 0.00 39.63 1.28
370 374 5.654317 TCGCAAACACGTTGTCTTTATTA 57.346 34.783 0.00 0.00 39.63 0.98
371 375 4.539509 TCGCAAACACGTTGTCTTTATT 57.460 36.364 0.00 0.00 39.63 1.40
372 376 4.523813 CTTCGCAAACACGTTGTCTTTAT 58.476 39.130 0.00 0.00 39.63 1.40
373 377 3.242478 CCTTCGCAAACACGTTGTCTTTA 60.242 43.478 0.00 0.00 39.63 1.85
374 378 2.477189 CCTTCGCAAACACGTTGTCTTT 60.477 45.455 0.00 0.00 39.63 2.52
375 379 1.063469 CCTTCGCAAACACGTTGTCTT 59.937 47.619 0.00 0.00 39.63 3.01
376 380 0.655733 CCTTCGCAAACACGTTGTCT 59.344 50.000 0.00 0.00 39.63 3.41
377 381 0.928451 GCCTTCGCAAACACGTTGTC 60.928 55.000 0.00 0.00 39.63 3.18
378 382 1.063488 GCCTTCGCAAACACGTTGT 59.937 52.632 0.00 0.00 39.63 3.32
379 383 1.657181 GGCCTTCGCAAACACGTTG 60.657 57.895 0.00 0.00 40.50 4.10
380 384 2.719354 GGCCTTCGCAAACACGTT 59.281 55.556 0.00 0.00 36.38 3.99
381 385 3.645975 CGGCCTTCGCAAACACGT 61.646 61.111 0.00 0.00 36.38 4.49
382 386 3.342627 TCGGCCTTCGCAAACACG 61.343 61.111 0.00 0.00 39.05 4.49
383 387 2.054140 TTGTCGGCCTTCGCAAACAC 62.054 55.000 0.00 0.00 39.05 3.32
384 388 1.781025 CTTGTCGGCCTTCGCAAACA 61.781 55.000 0.00 0.00 39.05 2.83
385 389 1.082104 CTTGTCGGCCTTCGCAAAC 60.082 57.895 0.00 0.00 39.05 2.93
386 390 1.525077 ACTTGTCGGCCTTCGCAAA 60.525 52.632 0.00 0.00 39.05 3.68
387 391 2.110213 ACTTGTCGGCCTTCGCAA 59.890 55.556 0.00 0.00 39.05 4.85
388 392 2.664851 CACTTGTCGGCCTTCGCA 60.665 61.111 0.00 0.00 39.05 5.10
389 393 2.171489 GAACACTTGTCGGCCTTCGC 62.171 60.000 0.00 0.00 39.05 4.70
390 394 0.878523 TGAACACTTGTCGGCCTTCG 60.879 55.000 0.00 0.00 40.90 3.79
391 395 0.868406 CTGAACACTTGTCGGCCTTC 59.132 55.000 0.00 0.00 0.00 3.46
392 396 0.468226 TCTGAACACTTGTCGGCCTT 59.532 50.000 0.00 0.00 0.00 4.35
393 397 0.687354 ATCTGAACACTTGTCGGCCT 59.313 50.000 0.00 0.00 0.00 5.19
394 398 2.000447 GTATCTGAACACTTGTCGGCC 59.000 52.381 0.00 0.00 0.00 6.13
395 399 2.960819 AGTATCTGAACACTTGTCGGC 58.039 47.619 0.00 0.00 0.00 5.54
396 400 5.891451 TCATAGTATCTGAACACTTGTCGG 58.109 41.667 1.28 0.00 0.00 4.79
412 416 9.682465 ACGAGGAAAGCAGTATATATCATAGTA 57.318 33.333 0.00 0.00 0.00 1.82
413 417 8.462811 CACGAGGAAAGCAGTATATATCATAGT 58.537 37.037 0.00 0.00 0.00 2.12
414 418 8.678199 TCACGAGGAAAGCAGTATATATCATAG 58.322 37.037 0.00 0.00 0.00 2.23
415 419 8.575649 TCACGAGGAAAGCAGTATATATCATA 57.424 34.615 0.00 0.00 0.00 2.15
416 420 7.177568 ACTCACGAGGAAAGCAGTATATATCAT 59.822 37.037 0.00 0.00 0.00 2.45
417 421 6.490381 ACTCACGAGGAAAGCAGTATATATCA 59.510 38.462 0.00 0.00 0.00 2.15
418 422 6.915349 ACTCACGAGGAAAGCAGTATATATC 58.085 40.000 0.00 0.00 0.00 1.63
419 423 6.717540 AGACTCACGAGGAAAGCAGTATATAT 59.282 38.462 0.00 0.00 0.00 0.86
420 424 6.017026 CAGACTCACGAGGAAAGCAGTATATA 60.017 42.308 0.00 0.00 0.00 0.86
421 425 4.890581 AGACTCACGAGGAAAGCAGTATAT 59.109 41.667 0.00 0.00 0.00 0.86
422 426 4.096532 CAGACTCACGAGGAAAGCAGTATA 59.903 45.833 0.00 0.00 0.00 1.47
423 427 3.093057 AGACTCACGAGGAAAGCAGTAT 58.907 45.455 0.00 0.00 0.00 2.12
424 428 2.229062 CAGACTCACGAGGAAAGCAGTA 59.771 50.000 0.00 0.00 0.00 2.74
425 429 1.000283 CAGACTCACGAGGAAAGCAGT 60.000 52.381 0.00 0.00 0.00 4.40
426 430 1.707632 CAGACTCACGAGGAAAGCAG 58.292 55.000 0.00 0.00 0.00 4.24
427 431 0.319900 GCAGACTCACGAGGAAAGCA 60.320 55.000 0.00 0.00 0.00 3.91
428 432 0.319900 TGCAGACTCACGAGGAAAGC 60.320 55.000 0.00 0.00 0.00 3.51
429 433 2.154854 TTGCAGACTCACGAGGAAAG 57.845 50.000 0.00 0.00 0.00 2.62
430 434 2.613026 TTTGCAGACTCACGAGGAAA 57.387 45.000 0.00 0.00 0.00 3.13
431 435 2.416747 CATTTGCAGACTCACGAGGAA 58.583 47.619 0.00 0.00 0.00 3.36
432 436 1.338105 CCATTTGCAGACTCACGAGGA 60.338 52.381 0.00 0.00 0.00 3.71
433 437 1.081892 CCATTTGCAGACTCACGAGG 58.918 55.000 0.00 0.00 0.00 4.63
434 438 1.462283 CACCATTTGCAGACTCACGAG 59.538 52.381 0.00 0.00 0.00 4.18
435 439 1.202639 ACACCATTTGCAGACTCACGA 60.203 47.619 0.00 0.00 0.00 4.35
436 440 1.229428 ACACCATTTGCAGACTCACG 58.771 50.000 0.00 0.00 0.00 4.35
437 441 2.618241 TGAACACCATTTGCAGACTCAC 59.382 45.455 0.00 0.00 0.00 3.51
438 442 2.929641 TGAACACCATTTGCAGACTCA 58.070 42.857 0.00 0.00 0.00 3.41
439 443 4.510038 AATGAACACCATTTGCAGACTC 57.490 40.909 0.00 0.00 42.55 3.36
459 463 9.402320 TGGCAAGCATATACTATGAAAAGTAAA 57.598 29.630 0.00 0.00 35.65 2.01
460 464 8.972458 TGGCAAGCATATACTATGAAAAGTAA 57.028 30.769 0.00 0.00 35.65 2.24
462 466 9.573166 TTATGGCAAGCATATACTATGAAAAGT 57.427 29.630 0.00 0.00 0.00 2.66
476 480 8.590204 TGATCATATCATTTTTATGGCAAGCAT 58.410 29.630 0.00 0.00 33.59 3.79
477 481 7.953752 TGATCATATCATTTTTATGGCAAGCA 58.046 30.769 0.00 0.00 33.59 3.91
478 482 8.821147 TTGATCATATCATTTTTATGGCAAGC 57.179 30.769 0.00 0.00 39.39 4.01
538 542 9.669887 ACCAATCACATACATTGCATTTTTATT 57.330 25.926 0.00 0.00 30.94 1.40
539 543 9.669887 AACCAATCACATACATTGCATTTTTAT 57.330 25.926 0.00 0.00 30.94 1.40
540 544 9.499479 AAACCAATCACATACATTGCATTTTTA 57.501 25.926 0.00 0.00 30.94 1.52
541 545 7.982761 AACCAATCACATACATTGCATTTTT 57.017 28.000 0.00 0.00 30.94 1.94
542 546 7.982761 AAACCAATCACATACATTGCATTTT 57.017 28.000 0.00 0.00 30.94 1.82
543 547 8.934825 GTTAAACCAATCACATACATTGCATTT 58.065 29.630 0.00 0.00 30.94 2.32
544 548 8.313292 AGTTAAACCAATCACATACATTGCATT 58.687 29.630 0.00 0.00 30.94 3.56
545 549 7.839907 AGTTAAACCAATCACATACATTGCAT 58.160 30.769 0.00 0.00 30.94 3.96
546 550 7.225784 AGTTAAACCAATCACATACATTGCA 57.774 32.000 0.00 0.00 30.94 4.08
555 559 9.913310 TCCATTCATATAGTTAAACCAATCACA 57.087 29.630 0.00 0.00 0.00 3.58
575 579 9.639601 CCTAAATGAAAAGGTTACTTTCCATTC 57.360 33.333 5.38 0.00 45.00 2.67
577 581 8.721133 ACCTAAATGAAAAGGTTACTTTCCAT 57.279 30.769 0.00 0.00 42.55 3.41
578 582 9.292195 CTACCTAAATGAAAAGGTTACTTTCCA 57.708 33.333 0.00 0.00 45.85 3.53
579 583 9.511272 TCTACCTAAATGAAAAGGTTACTTTCC 57.489 33.333 0.00 0.00 45.85 3.13
582 586 9.722184 GTCTCTACCTAAATGAAAAGGTTACTT 57.278 33.333 0.00 0.00 43.77 2.24
583 587 8.033626 CGTCTCTACCTAAATGAAAAGGTTACT 58.966 37.037 0.00 0.00 43.77 2.24
584 588 7.277319 CCGTCTCTACCTAAATGAAAAGGTTAC 59.723 40.741 0.00 0.00 43.77 2.50
585 589 7.178983 TCCGTCTCTACCTAAATGAAAAGGTTA 59.821 37.037 0.00 0.00 43.77 2.85
586 590 6.013984 TCCGTCTCTACCTAAATGAAAAGGTT 60.014 38.462 0.00 0.00 43.77 3.50
588 592 5.974108 TCCGTCTCTACCTAAATGAAAAGG 58.026 41.667 0.00 0.00 38.93 3.11
589 593 6.864342 TCTCCGTCTCTACCTAAATGAAAAG 58.136 40.000 0.00 0.00 0.00 2.27
590 594 6.845758 TCTCCGTCTCTACCTAAATGAAAA 57.154 37.500 0.00 0.00 0.00 2.29
591 595 6.183360 CCATCTCCGTCTCTACCTAAATGAAA 60.183 42.308 0.00 0.00 0.00 2.69
592 596 5.302059 CCATCTCCGTCTCTACCTAAATGAA 59.698 44.000 0.00 0.00 0.00 2.57
593 597 4.827835 CCATCTCCGTCTCTACCTAAATGA 59.172 45.833 0.00 0.00 0.00 2.57
594 598 4.827835 TCCATCTCCGTCTCTACCTAAATG 59.172 45.833 0.00 0.00 0.00 2.32
595 599 5.063017 TCCATCTCCGTCTCTACCTAAAT 57.937 43.478 0.00 0.00 0.00 1.40
596 600 4.165565 TCTCCATCTCCGTCTCTACCTAAA 59.834 45.833 0.00 0.00 0.00 1.85
597 601 3.715315 TCTCCATCTCCGTCTCTACCTAA 59.285 47.826 0.00 0.00 0.00 2.69
598 602 3.315596 TCTCCATCTCCGTCTCTACCTA 58.684 50.000 0.00 0.00 0.00 3.08
599 603 2.128535 TCTCCATCTCCGTCTCTACCT 58.871 52.381 0.00 0.00 0.00 3.08
600 604 2.642154 TCTCCATCTCCGTCTCTACC 57.358 55.000 0.00 0.00 0.00 3.18
601 605 2.882137 CCTTCTCCATCTCCGTCTCTAC 59.118 54.545 0.00 0.00 0.00 2.59
602 606 2.778270 TCCTTCTCCATCTCCGTCTCTA 59.222 50.000 0.00 0.00 0.00 2.43
603 607 1.566703 TCCTTCTCCATCTCCGTCTCT 59.433 52.381 0.00 0.00 0.00 3.10
604 608 1.679153 GTCCTTCTCCATCTCCGTCTC 59.321 57.143 0.00 0.00 0.00 3.36
605 609 1.006043 TGTCCTTCTCCATCTCCGTCT 59.994 52.381 0.00 0.00 0.00 4.18
607 611 1.479709 CTGTCCTTCTCCATCTCCGT 58.520 55.000 0.00 0.00 0.00 4.69
621 625 4.694339 AGATTACGTTTATGCTCCTGTCC 58.306 43.478 0.00 0.00 0.00 4.02
624 628 6.292381 GCAACTAGATTACGTTTATGCTCCTG 60.292 42.308 0.00 0.00 0.00 3.86
628 633 4.814771 GGGCAACTAGATTACGTTTATGCT 59.185 41.667 0.00 0.00 0.00 3.79
644 649 2.147387 ACTTCTCCGTGGGGCAACT 61.147 57.895 0.00 0.00 0.00 3.16
648 653 1.376037 CTTCACTTCTCCGTGGGGC 60.376 63.158 0.00 0.00 35.63 5.80
657 662 9.975218 TCTTAATATTTTTAGCCCTTCACTTCT 57.025 29.630 0.00 0.00 0.00 2.85
680 685 7.657761 CCTTCGCAGGTATACATTTATCTTCTT 59.342 37.037 5.01 0.00 35.06 2.52
689 694 2.124411 ACCCCTTCGCAGGTATACATT 58.876 47.619 5.01 0.00 38.79 2.71
690 695 1.416401 CACCCCTTCGCAGGTATACAT 59.584 52.381 5.01 0.00 38.79 2.29
694 699 1.615424 ACCACCCCTTCGCAGGTAT 60.615 57.895 0.00 0.00 38.79 2.73
695 700 2.203877 ACCACCCCTTCGCAGGTA 60.204 61.111 0.00 0.00 38.79 3.08
696 701 3.953775 CACCACCCCTTCGCAGGT 61.954 66.667 0.00 0.00 38.79 4.00
701 706 3.353836 CAACGCACCACCCCTTCG 61.354 66.667 0.00 0.00 0.00 3.79
702 707 1.515521 CTTCAACGCACCACCCCTTC 61.516 60.000 0.00 0.00 0.00 3.46
703 708 1.528309 CTTCAACGCACCACCCCTT 60.528 57.895 0.00 0.00 0.00 3.95
704 709 2.113139 CTTCAACGCACCACCCCT 59.887 61.111 0.00 0.00 0.00 4.79
735 740 1.865622 CAGACTTCGCTCTCGTCGC 60.866 63.158 0.00 0.00 36.96 5.19
758 764 9.553064 CTGATATTCTTAACCATTCTACAGCTT 57.447 33.333 0.00 0.00 0.00 3.74
765 771 6.208204 GGCATGCTGATATTCTTAACCATTCT 59.792 38.462 18.92 0.00 0.00 2.40
810 817 6.093633 CACCTTAACTAACTATGCTGGGAAAC 59.906 42.308 0.00 0.00 0.00 2.78
821 828 5.149976 ACCTCACCACACCTTAACTAACTA 58.850 41.667 0.00 0.00 0.00 2.24
833 840 3.469863 TTGGCCGACCTCACCACAC 62.470 63.158 0.00 0.00 36.63 3.82
834 841 3.164977 TTGGCCGACCTCACCACA 61.165 61.111 0.00 0.00 36.63 4.17
882 889 4.528596 TGTCTTGTTTTCTCTAGCTAGGCT 59.471 41.667 20.58 0.00 43.41 4.58
894 903 1.859998 GCTGTGGCGTGTCTTGTTTTC 60.860 52.381 0.00 0.00 0.00 2.29
919 928 6.019318 CCGTTCGGTTAAATACAAGAGTATGG 60.019 42.308 2.82 0.00 40.00 2.74
923 932 3.681417 GCCGTTCGGTTAAATACAAGAGT 59.319 43.478 12.81 0.00 0.00 3.24
957 966 2.620112 GCACGCATGGAAGCTGTGT 61.620 57.895 0.00 0.00 39.47 3.72
958 967 2.177531 GCACGCATGGAAGCTGTG 59.822 61.111 0.00 0.00 39.90 3.66
960 969 2.537792 CTTGGCACGCATGGAAGCTG 62.538 60.000 0.00 0.00 0.00 4.24
961 970 2.282391 TTGGCACGCATGGAAGCT 60.282 55.556 0.00 0.00 0.00 3.74
980 989 8.365399 TGACATTGTTGAAGAGTAGTTAGTTG 57.635 34.615 0.00 0.00 0.00 3.16
981 990 8.827677 GTTGACATTGTTGAAGAGTAGTTAGTT 58.172 33.333 0.00 0.00 0.00 2.24
982 991 7.169308 CGTTGACATTGTTGAAGAGTAGTTAGT 59.831 37.037 0.00 0.00 0.00 2.24
983 992 7.359264 CCGTTGACATTGTTGAAGAGTAGTTAG 60.359 40.741 0.00 0.00 0.00 2.34
987 996 4.377431 GCCGTTGACATTGTTGAAGAGTAG 60.377 45.833 0.00 0.00 0.00 2.57
1050 1059 4.431131 CCCTCCGTGGCTGCCAAT 62.431 66.667 25.23 0.00 34.18 3.16
1081 1105 1.685765 AGCTACCCTGACATGCCGA 60.686 57.895 0.00 0.00 0.00 5.54
1084 1108 0.745845 CCACAGCTACCCTGACATGC 60.746 60.000 0.00 0.00 44.64 4.06
1110 1134 0.104304 CGAAGGGGTAAGGGATGTCG 59.896 60.000 0.00 0.00 0.00 4.35
1161 1185 1.936656 GCGTCTGTGCAGTTGATCTCA 60.937 52.381 0.00 0.00 34.15 3.27
1199 1235 4.082523 CCTGGATGGACGTGCCGT 62.083 66.667 4.04 1.20 45.10 5.68
1201 1237 2.436646 CACCTGGATGGACGTGCC 60.437 66.667 4.04 0.43 39.71 5.01
1202 1238 2.436646 CCACCTGGATGGACGTGC 60.437 66.667 0.00 0.00 43.02 5.34
1221 1257 0.100861 GTGGATCGACGGAGAGGTTC 59.899 60.000 0.00 0.00 0.00 3.62
1264 1300 2.691409 TGATAGCACTGCCACCTAAC 57.309 50.000 0.00 0.00 0.00 2.34
1304 1343 3.000078 GTCGTTCATATTGCGTACCACTG 60.000 47.826 0.00 0.00 0.00 3.66
1323 1362 0.784778 GGTTGAAGAAGCTCGTGTCG 59.215 55.000 0.00 0.00 0.00 4.35
1343 1382 4.085721 CGTCGATAGGTATGTTTTTCTCGC 60.086 45.833 0.00 0.00 0.00 5.03
1350 1389 1.406539 ACGCCGTCGATAGGTATGTTT 59.593 47.619 10.88 0.00 39.41 2.83
1384 1423 0.940126 AAGAGCTCGTTGTGCTTGTG 59.060 50.000 8.37 0.00 41.30 3.33
1397 1436 1.294780 CAGCCAAGGACGAAGAGCT 59.705 57.895 0.00 0.00 0.00 4.09
1441 1480 3.006672 CCAGTGTTTGGCTCTCGTT 57.993 52.632 0.00 0.00 40.87 3.85
1442 1481 4.779475 CCAGTGTTTGGCTCTCGT 57.221 55.556 0.00 0.00 40.87 4.18
1469 1508 1.296392 CAGAAGGACATGCACCCGA 59.704 57.895 6.00 0.00 0.00 5.14
1536 1575 0.451383 GCTGGATGCGTATGTTGCAA 59.549 50.000 0.00 0.00 46.87 4.08
1542 1581 1.665916 CTCCGGCTGGATGCGTATG 60.666 63.158 16.52 0.00 45.33 2.39
1543 1582 2.737180 CTCCGGCTGGATGCGTAT 59.263 61.111 16.52 0.00 45.33 3.06
1573 1612 2.039746 TGATGTTGGGGAACTCGAACAT 59.960 45.455 13.24 13.24 40.80 2.71
1597 1636 2.874751 CATGTCGGGCCGGTTTTC 59.125 61.111 27.98 11.96 0.00 2.29
1600 1639 4.778143 GAGCATGTCGGGCCGGTT 62.778 66.667 27.98 7.64 0.00 4.44
1602 1641 4.776322 TTGAGCATGTCGGGCCGG 62.776 66.667 27.98 11.17 0.00 6.13
1603 1642 2.572095 TAGTTGAGCATGTCGGGCCG 62.572 60.000 22.51 22.51 0.00 6.13
1604 1643 1.090052 GTAGTTGAGCATGTCGGGCC 61.090 60.000 0.00 0.00 0.00 5.80
1608 1647 1.002366 GGCTGTAGTTGAGCATGTCG 58.998 55.000 0.00 0.00 38.27 4.35
1609 1648 1.339055 TGGGCTGTAGTTGAGCATGTC 60.339 52.381 0.00 0.00 38.27 3.06
1611 1650 1.674441 CATGGGCTGTAGTTGAGCATG 59.326 52.381 0.00 0.00 38.27 4.06
1654 1693 3.314693 TCTGGAAGGTGTAGTTGTCCTT 58.685 45.455 0.00 0.00 43.20 3.36
1688 1727 0.884259 CCGTGTTCTGTCCATGTGCA 60.884 55.000 0.00 0.00 0.00 4.57
1725 1764 2.622903 TTTCGCGGATAGCCCAGTCG 62.623 60.000 6.13 0.00 44.76 4.18
1768 1807 0.108138 GCGTACTGATCTGCCCTGTT 60.108 55.000 0.00 0.00 0.00 3.16
1771 1810 3.221222 GGCGTACTGATCTGCCCT 58.779 61.111 0.00 0.00 41.70 5.19
1875 1914 2.056577 CCACTTTCGTCGACAAGGTAC 58.943 52.381 17.16 0.00 0.00 3.34
1886 1925 1.671054 CCGGTGCATCCACTTTCGT 60.671 57.895 0.00 0.00 41.75 3.85
1893 1932 1.376683 GTGCTTACCGGTGCATCCA 60.377 57.895 21.10 6.97 41.45 3.41
2215 2260 4.464008 AGCAAAGATGTCTGGTTGAAGAA 58.536 39.130 0.00 0.00 0.00 2.52
2230 2275 2.483876 CAGTGAACTTCCGAGCAAAGA 58.516 47.619 0.00 0.00 0.00 2.52
2293 2338 5.751028 CCAGGCTTCTAAAGTTCTAAGATCG 59.249 44.000 0.00 0.00 0.00 3.69
2305 2350 2.238521 CTTTGCACCCAGGCTTCTAAA 58.761 47.619 0.00 0.00 34.04 1.85
2306 2351 1.909700 CTTTGCACCCAGGCTTCTAA 58.090 50.000 0.00 0.00 34.04 2.10
2307 2352 0.609131 GCTTTGCACCCAGGCTTCTA 60.609 55.000 0.00 0.00 34.04 2.10
2308 2353 1.905354 GCTTTGCACCCAGGCTTCT 60.905 57.895 0.00 0.00 34.04 2.85
2309 2354 1.466851 AAGCTTTGCACCCAGGCTTC 61.467 55.000 0.72 0.00 37.31 3.86
2310 2355 1.458209 AAGCTTTGCACCCAGGCTT 60.458 52.632 0.72 0.72 37.18 4.35
2311 2356 1.905354 GAAGCTTTGCACCCAGGCT 60.905 57.895 0.00 0.00 34.78 4.58
2312 2357 1.871126 GAGAAGCTTTGCACCCAGGC 61.871 60.000 0.00 0.00 0.00 4.85
2313 2358 0.538057 TGAGAAGCTTTGCACCCAGG 60.538 55.000 0.00 0.00 0.00 4.45
2317 2362 2.157738 ACTGATGAGAAGCTTTGCACC 58.842 47.619 0.00 0.00 0.00 5.01
2366 2414 1.485294 TTGAAGGCGCAGTAGGGGAA 61.485 55.000 10.83 0.00 0.00 3.97
2435 2483 2.391616 TCCATTGCACTAGCTGTCTG 57.608 50.000 0.00 0.00 42.74 3.51
2604 2652 1.401931 CGCACATTTTCCCTCTTGCTG 60.402 52.381 0.00 0.00 0.00 4.41
2605 2653 0.883833 CGCACATTTTCCCTCTTGCT 59.116 50.000 0.00 0.00 0.00 3.91
2609 2657 2.270352 TGTTCGCACATTTTCCCTCT 57.730 45.000 0.00 0.00 0.00 3.69
2610 2658 2.661594 GTTGTTCGCACATTTTCCCTC 58.338 47.619 0.00 0.00 31.06 4.30
2611 2659 1.001815 CGTTGTTCGCACATTTTCCCT 60.002 47.619 0.00 0.00 31.06 4.20
2642 2690 1.669115 CGGAGGACAGGTGCAGTTG 60.669 63.158 0.00 0.00 0.00 3.16
2643 2691 2.743718 CGGAGGACAGGTGCAGTT 59.256 61.111 0.00 0.00 0.00 3.16
2671 2719 3.502191 TTTCTATTTTGGCGTCATGGC 57.498 42.857 0.00 0.00 45.12 4.40
2699 2747 6.041523 CCAGTGGGAAATTTGAAGGAAGTAAA 59.958 38.462 0.00 0.00 35.59 2.01
2713 2761 0.971386 CTTTGCTGCCAGTGGGAAAT 59.029 50.000 12.15 0.00 35.59 2.17
2771 2819 5.232414 CGAATGAAATCTCCCTTCGTCTAAC 59.768 44.000 0.00 0.00 33.96 2.34
2775 2823 3.307242 CACGAATGAAATCTCCCTTCGTC 59.693 47.826 5.74 0.00 42.39 4.20
2858 2908 3.944015 CCTTTGGCAAGAGATCGATTCTT 59.056 43.478 13.63 13.63 33.74 2.52
3054 3108 4.684703 AGTGCTAACAACTGCTTTACGTAG 59.315 41.667 0.00 0.00 0.00 3.51
3103 3157 1.610363 TTGGCCACAAACATAGCGAA 58.390 45.000 3.88 0.00 32.66 4.70
3170 3224 1.974236 AGGAGGAGCCCGAAATGATAG 59.026 52.381 0.00 0.00 37.37 2.08
3441 3495 4.329392 TGGTAAATTCCTCCTTTCGAACC 58.671 43.478 0.00 0.00 0.00 3.62
3516 3570 4.357279 ACCTCCAAGCAGCAGCCC 62.357 66.667 0.00 0.00 43.56 5.19
3753 3807 5.503031 CGATGTCCCGAAATCTGAGATTTTG 60.503 44.000 22.60 22.60 0.00 2.44
3762 3816 3.611766 AACTTCGATGTCCCGAAATCT 57.388 42.857 4.21 0.00 46.19 2.40
3795 3849 0.804989 CAAGCCCGGTGTGATCTTTC 59.195 55.000 0.00 0.00 0.00 2.62
3894 3948 3.005472 TGAGTTCCAAGAGTACAACTCCG 59.995 47.826 15.16 0.00 46.18 4.63
4026 4080 8.475639 TCCAGTATGTAAGTATCTTCTTTGGTC 58.524 37.037 0.00 0.00 0.00 4.02
4066 4120 4.561735 GTGCTAAACACTTTACAGCCAA 57.438 40.909 0.00 0.00 46.41 4.52
4089 4143 3.374367 TCTCTGGACGATCTTCTACAACG 59.626 47.826 0.00 0.00 0.00 4.10
4316 4378 0.163788 CTGCAACAGACTTTACGGCG 59.836 55.000 4.80 4.80 32.44 6.46
4320 4382 6.787085 ACTATTCACTGCAACAGACTTTAC 57.213 37.500 0.78 0.00 35.18 2.01
4352 4414 3.073946 ACACCAACAAAGCTACCAGGTAT 59.926 43.478 0.00 0.00 0.00 2.73
4376 4438 3.809832 ACACTTCGAAGAACAAGGTGATG 59.190 43.478 31.08 16.31 45.90 3.07
4421 4483 7.114670 CAGATGTCGATCTCTATGTTGTCATTC 59.885 40.741 0.00 0.00 36.75 2.67
4433 4495 1.039068 CCAGGCAGATGTCGATCTCT 58.961 55.000 0.00 0.00 36.75 3.10
4461 4523 7.623715 GCCGTCAAGAAAACTCTAGGAATTAAC 60.624 40.741 0.00 0.00 0.00 2.01
4494 4556 9.331282 CTAAAAGGGATTCTAAGGTACTGAATG 57.669 37.037 0.00 0.00 40.86 2.67
4536 4600 7.012989 TCTGATATGCTCTGTTTTCAATGGATG 59.987 37.037 0.00 0.00 0.00 3.51
4537 4601 7.058525 TCTGATATGCTCTGTTTTCAATGGAT 58.941 34.615 0.00 0.00 0.00 3.41
4594 4663 4.000988 GGAGGATTTACACACGACAATGT 58.999 43.478 0.00 0.00 0.00 2.71
4595 4664 3.374058 GGGAGGATTTACACACGACAATG 59.626 47.826 0.00 0.00 0.00 2.82
4596 4665 3.263425 AGGGAGGATTTACACACGACAAT 59.737 43.478 0.00 0.00 0.00 2.71
4597 4666 2.635915 AGGGAGGATTTACACACGACAA 59.364 45.455 0.00 0.00 0.00 3.18
4598 4667 2.253610 AGGGAGGATTTACACACGACA 58.746 47.619 0.00 0.00 0.00 4.35
4599 4668 4.341520 AGATAGGGAGGATTTACACACGAC 59.658 45.833 0.00 0.00 0.00 4.34
4600 4669 4.543689 AGATAGGGAGGATTTACACACGA 58.456 43.478 0.00 0.00 0.00 4.35
4601 4670 4.939052 AGATAGGGAGGATTTACACACG 57.061 45.455 0.00 0.00 0.00 4.49
4665 4734 5.673337 TTAGTTGTCAGTGCATCTTCAAC 57.327 39.130 15.05 15.05 38.00 3.18
4680 4749 0.868406 GAGCTGCGCAGTTTAGTTGT 59.132 50.000 35.80 12.41 0.00 3.32
4752 4823 6.620678 TCCTTTTTAGCAGCACATGTTATTC 58.379 36.000 0.00 0.00 0.00 1.75
4851 4922 5.418840 TGAAACTTCCCCAATTGAGAATAGC 59.581 40.000 7.12 1.57 0.00 2.97
5011 5084 2.721167 ATCGGCTGCTCGGCACTTA 61.721 57.895 0.00 0.00 38.27 2.24
5143 5228 0.671796 TCGTTCGCCTGAAGACTGAA 59.328 50.000 0.00 0.00 33.98 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.