Multiple sequence alignment - TraesCS5D01G477200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G477200 chr5D 100.000 2636 0 0 1 2636 515677514 515680149 0.000000e+00 4868.0
1 TraesCS5D01G477200 chr5D 73.371 537 116 20 1095 1619 515690226 515690747 9.700000e-40 174.0
2 TraesCS5D01G477200 chr5B 92.381 1260 70 12 991 2231 648753762 648755014 0.000000e+00 1772.0
3 TraesCS5D01G477200 chr5B 90.641 577 46 4 999 1567 648361373 648361949 0.000000e+00 760.0
4 TraesCS5D01G477200 chr5B 95.518 357 13 1 304 660 648746548 648746901 3.810000e-158 568.0
5 TraesCS5D01G477200 chr5B 95.876 291 10 2 303 592 648356475 648356186 1.100000e-128 470.0
6 TraesCS5D01G477200 chr5B 92.558 215 11 5 774 988 648751223 648751432 1.190000e-78 303.0
7 TraesCS5D01G477200 chr5B 88.446 251 25 2 1985 2231 648354726 648354476 1.530000e-77 300.0
8 TraesCS5D01G477200 chr5B 75.654 612 132 13 1017 1618 644894704 644894100 3.320000e-74 289.0
9 TraesCS5D01G477200 chr5B 76.891 476 88 16 1106 1567 647875640 647876107 1.570000e-62 250.0
10 TraesCS5D01G477200 chr5B 89.474 190 20 0 2274 2463 648755100 648755289 9.430000e-60 241.0
11 TraesCS5D01G477200 chr5B 89.005 191 18 3 1778 1966 648356130 648355941 1.580000e-57 233.0
12 TraesCS5D01G477200 chr5B 89.091 110 12 0 820 929 648360688 648360797 1.270000e-28 137.0
13 TraesCS5D01G477200 chr5B 89.109 101 9 2 92 192 661042249 661042151 9.910000e-25 124.0
14 TraesCS5D01G477200 chr5B 94.444 72 1 1 649 720 648749041 648749109 9.980000e-20 108.0
15 TraesCS5D01G477200 chr5B 73.973 292 64 11 1330 1615 648854503 648854788 9.980000e-20 108.0
16 TraesCS5D01G477200 chr5B 94.828 58 3 0 718 775 648751100 648751157 1.000000e-14 91.6
17 TraesCS5D01G477200 chr5A 91.174 997 48 14 858 1825 643930327 643931312 0.000000e+00 1317.0
18 TraesCS5D01G477200 chr5A 89.239 381 34 3 2260 2633 643949746 643950126 1.100000e-128 470.0
19 TraesCS5D01G477200 chr5A 94.982 279 11 3 302 578 643927405 643927682 4.030000e-118 435.0
20 TraesCS5D01G477200 chr5A 76.546 469 97 9 1110 1570 643300019 643299556 7.290000e-61 244.0
21 TraesCS5D01G477200 chr5A 94.118 102 5 1 1877 1977 643931984 643932085 1.260000e-33 154.0
22 TraesCS5D01G477200 chr5A 95.294 85 1 2 608 691 643928006 643928088 5.920000e-27 132.0
23 TraesCS5D01G477200 chr7D 98.377 308 4 1 1 307 615463913 615464220 8.300000e-150 540.0
24 TraesCS5D01G477200 chr1A 98.046 307 6 0 1 307 557132301 557131995 3.860000e-148 534.0
25 TraesCS5D01G477200 chr1A 93.671 158 10 0 4 161 566468541 566468384 1.220000e-58 237.0
26 TraesCS5D01G477200 chr3D 91.739 230 4 1 78 307 11792266 11792480 3.300000e-79 305.0
27 TraesCS5D01G477200 chr3A 81.988 161 25 3 12 172 657679904 657679748 1.650000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G477200 chr5D 515677514 515680149 2635 False 4868.000000 4868 100.0000 1 2636 1 chr5D.!!$F1 2635
1 TraesCS5D01G477200 chr5B 648746548 648755289 8741 False 513.933333 1772 93.2005 304 2463 6 chr5B.!!$F4 2159
2 TraesCS5D01G477200 chr5B 648360688 648361949 1261 False 448.500000 760 89.8660 820 1567 2 chr5B.!!$F3 747
3 TraesCS5D01G477200 chr5B 648354476 648356475 1999 True 334.333333 470 91.1090 303 2231 3 chr5B.!!$R3 1928
4 TraesCS5D01G477200 chr5B 644894100 644894704 604 True 289.000000 289 75.6540 1017 1618 1 chr5B.!!$R1 601
5 TraesCS5D01G477200 chr5A 643927405 643932085 4680 False 509.500000 1317 93.8920 302 1977 4 chr5A.!!$F2 1675

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
273 274 0.106669 GGCCAGGGGACATAAGGTTC 60.107 60.0 0.0 0.0 0.0 3.62 F
280 281 0.108520 GGACATAAGGTTCGCACGGA 60.109 55.0 0.0 0.0 0.0 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1584 10795 0.179137 CGTGCTCTCTATTGGCGTCA 60.179 55.0 0.00 0.0 0.0 4.35 R
2247 13305 0.676782 GAAGTTGTAGGCCGGCATGT 60.677 55.0 30.85 14.9 0.0 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.696917 AAATCTGAATACACAACTTTGAATTCC 57.303 29.630 2.27 0.00 31.17 3.01
31 32 7.815840 TCTGAATACACAACTTTGAATTCCA 57.184 32.000 2.27 0.00 31.17 3.53
32 33 8.408043 TCTGAATACACAACTTTGAATTCCAT 57.592 30.769 2.27 0.00 31.17 3.41
33 34 8.298854 TCTGAATACACAACTTTGAATTCCATG 58.701 33.333 2.27 0.00 31.17 3.66
34 35 6.867816 TGAATACACAACTTTGAATTCCATGC 59.132 34.615 2.27 0.00 31.17 4.06
35 36 4.669206 ACACAACTTTGAATTCCATGCA 57.331 36.364 2.27 0.00 0.00 3.96
36 37 4.370917 ACACAACTTTGAATTCCATGCAC 58.629 39.130 2.27 0.00 0.00 4.57
37 38 4.141981 ACACAACTTTGAATTCCATGCACA 60.142 37.500 2.27 0.00 0.00 4.57
38 39 4.446385 CACAACTTTGAATTCCATGCACAG 59.554 41.667 2.27 0.00 0.00 3.66
39 40 4.099881 ACAACTTTGAATTCCATGCACAGT 59.900 37.500 2.27 0.00 0.00 3.55
40 41 4.942761 ACTTTGAATTCCATGCACAGTT 57.057 36.364 2.27 0.00 0.00 3.16
41 42 5.280654 ACTTTGAATTCCATGCACAGTTT 57.719 34.783 2.27 0.00 0.00 2.66
42 43 5.291971 ACTTTGAATTCCATGCACAGTTTC 58.708 37.500 2.27 0.00 0.00 2.78
43 44 4.933505 TTGAATTCCATGCACAGTTTCA 57.066 36.364 2.27 0.00 0.00 2.69
44 45 4.508461 TGAATTCCATGCACAGTTTCAG 57.492 40.909 2.27 0.00 0.00 3.02
45 46 3.248266 GAATTCCATGCACAGTTTCAGC 58.752 45.455 0.00 0.00 0.00 4.26
46 47 1.985473 TTCCATGCACAGTTTCAGCT 58.015 45.000 0.00 0.00 0.00 4.24
47 48 1.985473 TCCATGCACAGTTTCAGCTT 58.015 45.000 0.00 0.00 0.00 3.74
48 49 1.881973 TCCATGCACAGTTTCAGCTTC 59.118 47.619 0.00 0.00 0.00 3.86
49 50 1.610038 CCATGCACAGTTTCAGCTTCA 59.390 47.619 0.00 0.00 0.00 3.02
50 51 2.230508 CCATGCACAGTTTCAGCTTCAT 59.769 45.455 0.00 0.00 0.00 2.57
51 52 3.441222 CCATGCACAGTTTCAGCTTCATA 59.559 43.478 0.00 0.00 0.00 2.15
52 53 4.082625 CCATGCACAGTTTCAGCTTCATAA 60.083 41.667 0.00 0.00 0.00 1.90
53 54 5.463286 CATGCACAGTTTCAGCTTCATAAA 58.537 37.500 0.00 0.00 0.00 1.40
54 55 5.512753 TGCACAGTTTCAGCTTCATAAAA 57.487 34.783 0.00 0.00 0.00 1.52
55 56 6.088016 TGCACAGTTTCAGCTTCATAAAAT 57.912 33.333 0.00 0.00 0.00 1.82
56 57 5.921976 TGCACAGTTTCAGCTTCATAAAATG 59.078 36.000 6.53 6.53 35.10 2.32
57 58 5.922544 GCACAGTTTCAGCTTCATAAAATGT 59.077 36.000 7.49 7.49 40.74 2.71
58 59 6.421801 GCACAGTTTCAGCTTCATAAAATGTT 59.578 34.615 9.61 0.00 38.81 2.71
59 60 7.568134 GCACAGTTTCAGCTTCATAAAATGTTG 60.568 37.037 9.61 7.80 38.81 3.33
60 61 6.925165 ACAGTTTCAGCTTCATAAAATGTTGG 59.075 34.615 7.49 0.00 37.96 3.77
61 62 5.928264 AGTTTCAGCTTCATAAAATGTTGGC 59.072 36.000 0.00 0.00 0.00 4.52
62 63 5.465532 TTCAGCTTCATAAAATGTTGGCA 57.534 34.783 0.00 0.00 0.00 4.92
63 64 4.808558 TCAGCTTCATAAAATGTTGGCAC 58.191 39.130 0.00 0.00 0.00 5.01
64 65 4.280425 TCAGCTTCATAAAATGTTGGCACA 59.720 37.500 0.00 0.00 37.31 4.57
81 82 6.174720 TGGCACAAAACCCATAAATTAACA 57.825 33.333 0.00 0.00 31.92 2.41
82 83 6.773638 TGGCACAAAACCCATAAATTAACAT 58.226 32.000 0.00 0.00 31.92 2.71
83 84 6.876257 TGGCACAAAACCCATAAATTAACATC 59.124 34.615 0.00 0.00 31.92 3.06
84 85 7.102993 GGCACAAAACCCATAAATTAACATCT 58.897 34.615 0.00 0.00 0.00 2.90
85 86 7.606073 GGCACAAAACCCATAAATTAACATCTT 59.394 33.333 0.00 0.00 0.00 2.40
86 87 8.998377 GCACAAAACCCATAAATTAACATCTTT 58.002 29.630 0.00 0.00 0.00 2.52
102 103 7.992180 AACATCTTTGTAAAGTTTTGCAGAG 57.008 32.000 6.82 6.82 36.69 3.35
103 104 5.979517 ACATCTTTGTAAAGTTTTGCAGAGC 59.020 36.000 7.90 0.00 35.81 4.09
104 105 5.835113 TCTTTGTAAAGTTTTGCAGAGCT 57.165 34.783 7.90 0.00 35.81 4.09
105 106 6.207691 TCTTTGTAAAGTTTTGCAGAGCTT 57.792 33.333 0.17 0.17 35.81 3.74
106 107 6.265577 TCTTTGTAAAGTTTTGCAGAGCTTC 58.734 36.000 6.80 0.00 35.81 3.86
107 108 5.574891 TTGTAAAGTTTTGCAGAGCTTCA 57.425 34.783 6.80 0.00 34.36 3.02
108 109 5.173774 TGTAAAGTTTTGCAGAGCTTCAG 57.826 39.130 6.80 0.00 0.00 3.02
109 110 2.789491 AAGTTTTGCAGAGCTTCAGC 57.211 45.000 0.17 0.00 42.49 4.26
127 128 8.065557 GCTTCAGCTTAATAAAATATTGGCAC 57.934 34.615 0.00 0.00 38.21 5.01
128 129 7.706179 GCTTCAGCTTAATAAAATATTGGCACA 59.294 33.333 0.00 0.00 38.21 4.57
143 144 2.747396 GCACAATGCCCATTCAGAAA 57.253 45.000 0.00 0.00 37.42 2.52
144 145 3.255969 GCACAATGCCCATTCAGAAAT 57.744 42.857 0.00 0.00 37.42 2.17
145 146 3.192466 GCACAATGCCCATTCAGAAATC 58.808 45.455 0.00 0.00 37.42 2.17
146 147 3.368635 GCACAATGCCCATTCAGAAATCA 60.369 43.478 0.00 0.00 37.42 2.57
147 148 4.682320 GCACAATGCCCATTCAGAAATCAT 60.682 41.667 0.00 0.00 37.42 2.45
148 149 4.808895 CACAATGCCCATTCAGAAATCATG 59.191 41.667 0.00 0.00 0.00 3.07
149 150 4.468510 ACAATGCCCATTCAGAAATCATGT 59.531 37.500 0.00 0.00 0.00 3.21
150 151 5.657745 ACAATGCCCATTCAGAAATCATGTA 59.342 36.000 0.00 0.00 0.00 2.29
151 152 6.154877 ACAATGCCCATTCAGAAATCATGTAA 59.845 34.615 0.00 0.00 0.00 2.41
152 153 5.581126 TGCCCATTCAGAAATCATGTAAC 57.419 39.130 0.00 0.00 0.00 2.50
153 154 5.015515 TGCCCATTCAGAAATCATGTAACA 58.984 37.500 0.00 0.00 0.00 2.41
154 155 5.105797 TGCCCATTCAGAAATCATGTAACAC 60.106 40.000 0.00 0.00 0.00 3.32
155 156 5.105797 GCCCATTCAGAAATCATGTAACACA 60.106 40.000 0.00 0.00 0.00 3.72
156 157 6.324819 CCCATTCAGAAATCATGTAACACAC 58.675 40.000 0.00 0.00 0.00 3.82
157 158 6.023435 CCATTCAGAAATCATGTAACACACG 58.977 40.000 0.00 0.00 0.00 4.49
158 159 6.128309 CCATTCAGAAATCATGTAACACACGA 60.128 38.462 0.00 0.00 0.00 4.35
159 160 6.852858 TTCAGAAATCATGTAACACACGAA 57.147 33.333 0.00 0.00 0.00 3.85
160 161 6.223138 TCAGAAATCATGTAACACACGAAC 57.777 37.500 0.00 0.00 0.00 3.95
161 162 5.989168 TCAGAAATCATGTAACACACGAACT 59.011 36.000 0.00 0.00 0.00 3.01
162 163 6.481976 TCAGAAATCATGTAACACACGAACTT 59.518 34.615 0.00 0.00 0.00 2.66
163 164 6.574832 CAGAAATCATGTAACACACGAACTTG 59.425 38.462 0.00 0.00 0.00 3.16
164 165 6.260050 AGAAATCATGTAACACACGAACTTGT 59.740 34.615 0.00 0.00 0.00 3.16
165 166 7.439955 AGAAATCATGTAACACACGAACTTGTA 59.560 33.333 0.00 0.00 0.00 2.41
166 167 6.706055 ATCATGTAACACACGAACTTGTAG 57.294 37.500 0.00 0.00 0.00 2.74
167 168 5.593968 TCATGTAACACACGAACTTGTAGT 58.406 37.500 0.00 0.00 0.00 2.73
168 169 6.044046 TCATGTAACACACGAACTTGTAGTT 58.956 36.000 0.00 0.00 41.95 2.24
181 182 7.853377 GAACTTGTAGTTCCAAATAAGCAAC 57.147 36.000 8.09 0.00 46.68 4.17
182 183 6.952773 ACTTGTAGTTCCAAATAAGCAACA 57.047 33.333 0.00 0.00 0.00 3.33
183 184 7.341445 ACTTGTAGTTCCAAATAAGCAACAA 57.659 32.000 0.00 0.00 0.00 2.83
184 185 7.425606 ACTTGTAGTTCCAAATAAGCAACAAG 58.574 34.615 9.21 9.21 44.17 3.16
185 186 5.768317 TGTAGTTCCAAATAAGCAACAAGC 58.232 37.500 0.00 0.00 46.19 4.01
197 198 3.029320 GCAACAAGCCATGTCAATTGA 57.971 42.857 3.38 3.38 42.99 2.57
198 199 3.592059 GCAACAAGCCATGTCAATTGAT 58.408 40.909 12.12 0.00 42.99 2.57
199 200 3.998341 GCAACAAGCCATGTCAATTGATT 59.002 39.130 12.12 0.00 42.99 2.57
200 201 5.170021 GCAACAAGCCATGTCAATTGATTA 58.830 37.500 12.12 4.62 42.99 1.75
201 202 5.062558 GCAACAAGCCATGTCAATTGATTAC 59.937 40.000 12.12 0.00 42.99 1.89
202 203 6.392354 CAACAAGCCATGTCAATTGATTACT 58.608 36.000 12.12 2.79 42.99 2.24
203 204 5.957798 ACAAGCCATGTCAATTGATTACTG 58.042 37.500 12.12 6.93 37.96 2.74
204 205 5.477984 ACAAGCCATGTCAATTGATTACTGT 59.522 36.000 12.12 6.54 37.96 3.55
205 206 5.571784 AGCCATGTCAATTGATTACTGTG 57.428 39.130 12.12 4.88 0.00 3.66
206 207 4.400251 AGCCATGTCAATTGATTACTGTGG 59.600 41.667 12.12 13.51 0.00 4.17
207 208 4.158394 GCCATGTCAATTGATTACTGTGGT 59.842 41.667 12.12 0.00 0.00 4.16
208 209 5.643664 CCATGTCAATTGATTACTGTGGTG 58.356 41.667 12.12 0.00 0.00 4.17
209 210 5.393352 CCATGTCAATTGATTACTGTGGTGG 60.393 44.000 12.12 4.29 0.00 4.61
210 211 4.724399 TGTCAATTGATTACTGTGGTGGT 58.276 39.130 12.12 0.00 0.00 4.16
211 212 4.759693 TGTCAATTGATTACTGTGGTGGTC 59.240 41.667 12.12 0.00 0.00 4.02
212 213 4.000325 TCAATTGATTACTGTGGTGGTCG 59.000 43.478 3.38 0.00 0.00 4.79
213 214 3.695830 ATTGATTACTGTGGTGGTCGT 57.304 42.857 0.00 0.00 0.00 4.34
214 215 4.811969 ATTGATTACTGTGGTGGTCGTA 57.188 40.909 0.00 0.00 0.00 3.43
215 216 4.603989 TTGATTACTGTGGTGGTCGTAA 57.396 40.909 0.00 0.00 0.00 3.18
216 217 4.603989 TGATTACTGTGGTGGTCGTAAA 57.396 40.909 0.00 0.00 0.00 2.01
217 218 4.309099 TGATTACTGTGGTGGTCGTAAAC 58.691 43.478 0.00 0.00 0.00 2.01
218 219 4.039488 TGATTACTGTGGTGGTCGTAAACT 59.961 41.667 0.00 0.00 0.00 2.66
219 220 2.521105 ACTGTGGTGGTCGTAAACTC 57.479 50.000 0.00 0.00 0.00 3.01
220 221 2.037144 ACTGTGGTGGTCGTAAACTCT 58.963 47.619 0.00 0.00 0.00 3.24
221 222 2.223971 ACTGTGGTGGTCGTAAACTCTG 60.224 50.000 0.00 0.00 0.00 3.35
222 223 1.069513 TGTGGTGGTCGTAAACTCTGG 59.930 52.381 0.00 0.00 0.00 3.86
223 224 1.342174 GTGGTGGTCGTAAACTCTGGA 59.658 52.381 0.00 0.00 0.00 3.86
224 225 1.616865 TGGTGGTCGTAAACTCTGGAG 59.383 52.381 0.00 0.00 0.00 3.86
225 226 1.672145 GGTGGTCGTAAACTCTGGAGC 60.672 57.143 0.00 0.00 0.00 4.70
226 227 1.272769 GTGGTCGTAAACTCTGGAGCT 59.727 52.381 0.00 0.00 0.00 4.09
227 228 2.490903 GTGGTCGTAAACTCTGGAGCTA 59.509 50.000 0.00 0.00 0.00 3.32
228 229 2.753452 TGGTCGTAAACTCTGGAGCTAG 59.247 50.000 0.00 0.00 0.00 3.42
229 230 2.754002 GGTCGTAAACTCTGGAGCTAGT 59.246 50.000 0.00 0.00 0.00 2.57
230 231 3.427773 GGTCGTAAACTCTGGAGCTAGTG 60.428 52.174 0.00 0.00 0.00 2.74
231 232 3.190953 GTCGTAAACTCTGGAGCTAGTGT 59.809 47.826 0.00 0.00 0.00 3.55
232 233 3.825014 TCGTAAACTCTGGAGCTAGTGTT 59.175 43.478 0.00 0.00 36.32 3.32
233 234 5.005740 TCGTAAACTCTGGAGCTAGTGTTA 58.994 41.667 4.77 0.00 34.39 2.41
234 235 5.123502 TCGTAAACTCTGGAGCTAGTGTTAG 59.876 44.000 4.77 1.77 34.39 2.34
235 236 4.810191 AAACTCTGGAGCTAGTGTTAGG 57.190 45.455 4.77 0.00 34.39 2.69
236 237 3.459710 ACTCTGGAGCTAGTGTTAGGT 57.540 47.619 0.00 0.00 40.20 3.08
237 238 3.780626 ACTCTGGAGCTAGTGTTAGGTT 58.219 45.455 0.00 0.00 37.73 3.50
238 239 4.931914 ACTCTGGAGCTAGTGTTAGGTTA 58.068 43.478 0.00 0.00 37.73 2.85
239 240 5.331069 ACTCTGGAGCTAGTGTTAGGTTAA 58.669 41.667 0.00 0.00 37.73 2.01
240 241 5.185442 ACTCTGGAGCTAGTGTTAGGTTAAC 59.815 44.000 0.00 0.00 37.73 2.01
241 242 4.465305 TCTGGAGCTAGTGTTAGGTTAACC 59.535 45.833 17.41 17.41 37.73 2.85
243 244 4.465305 TGGAGCTAGTGTTAGGTTAACCTC 59.535 45.833 30.38 17.52 44.77 3.85
244 245 4.710865 GGAGCTAGTGTTAGGTTAACCTCT 59.289 45.833 30.38 21.95 44.77 3.69
245 246 5.890419 GGAGCTAGTGTTAGGTTAACCTCTA 59.110 44.000 30.38 21.89 44.77 2.43
246 247 6.183360 GGAGCTAGTGTTAGGTTAACCTCTAC 60.183 46.154 30.38 26.16 44.77 2.59
247 248 6.251471 AGCTAGTGTTAGGTTAACCTCTACA 58.749 40.000 30.38 28.13 44.77 2.74
252 253 7.219484 GTGTTAGGTTAACCTCTACACTACA 57.781 40.000 36.71 25.13 46.85 2.74
253 254 7.087007 GTGTTAGGTTAACCTCTACACTACAC 58.913 42.308 36.71 28.75 46.85 2.90
254 255 6.072508 TGTTAGGTTAACCTCTACACTACACG 60.073 42.308 30.38 0.00 44.77 4.49
255 256 3.760684 AGGTTAACCTCTACACTACACGG 59.239 47.826 21.96 0.00 44.77 4.94
256 257 3.505836 GTTAACCTCTACACTACACGGC 58.494 50.000 0.00 0.00 0.00 5.68
257 258 0.893447 AACCTCTACACTACACGGCC 59.107 55.000 0.00 0.00 0.00 6.13
258 259 0.251474 ACCTCTACACTACACGGCCA 60.251 55.000 2.24 0.00 0.00 5.36
259 260 0.456221 CCTCTACACTACACGGCCAG 59.544 60.000 2.24 0.00 0.00 4.85
260 261 0.456221 CTCTACACTACACGGCCAGG 59.544 60.000 2.24 0.00 0.00 4.45
261 262 0.968901 TCTACACTACACGGCCAGGG 60.969 60.000 2.24 0.00 0.00 4.45
262 263 1.956629 CTACACTACACGGCCAGGGG 61.957 65.000 2.24 0.00 0.00 4.79
263 264 2.444004 TACACTACACGGCCAGGGGA 62.444 60.000 2.24 0.00 0.00 4.81
264 265 3.001406 ACTACACGGCCAGGGGAC 61.001 66.667 2.24 0.00 0.00 4.46
265 266 3.000819 CTACACGGCCAGGGGACA 61.001 66.667 2.24 0.00 0.00 4.02
266 267 2.285069 TACACGGCCAGGGGACAT 60.285 61.111 2.24 0.00 0.00 3.06
267 268 1.001888 TACACGGCCAGGGGACATA 59.998 57.895 2.24 0.00 0.00 2.29
268 269 0.618107 TACACGGCCAGGGGACATAA 60.618 55.000 2.24 0.00 0.00 1.90
269 270 1.153168 CACGGCCAGGGGACATAAG 60.153 63.158 2.24 0.00 0.00 1.73
270 271 2.375345 ACGGCCAGGGGACATAAGG 61.375 63.158 2.24 0.00 0.00 2.69
271 272 2.375345 CGGCCAGGGGACATAAGGT 61.375 63.158 2.24 0.00 0.00 3.50
272 273 1.921869 CGGCCAGGGGACATAAGGTT 61.922 60.000 2.24 0.00 0.00 3.50
273 274 0.106669 GGCCAGGGGACATAAGGTTC 60.107 60.000 0.00 0.00 0.00 3.62
274 275 0.463833 GCCAGGGGACATAAGGTTCG 60.464 60.000 0.00 0.00 0.00 3.95
275 276 0.463833 CCAGGGGACATAAGGTTCGC 60.464 60.000 0.00 0.00 38.21 4.70
276 277 0.251916 CAGGGGACATAAGGTTCGCA 59.748 55.000 0.00 0.00 40.36 5.10
277 278 0.252197 AGGGGACATAAGGTTCGCAC 59.748 55.000 0.00 0.00 40.36 5.34
278 279 1.087771 GGGGACATAAGGTTCGCACG 61.088 60.000 0.00 0.00 37.85 5.34
279 280 1.087771 GGGACATAAGGTTCGCACGG 61.088 60.000 0.00 0.00 0.00 4.94
280 281 0.108520 GGACATAAGGTTCGCACGGA 60.109 55.000 0.00 0.00 0.00 4.69
281 282 0.997196 GACATAAGGTTCGCACGGAC 59.003 55.000 0.00 0.00 0.00 4.79
282 283 0.734942 ACATAAGGTTCGCACGGACG 60.735 55.000 0.00 0.00 0.00 4.79
283 284 0.457166 CATAAGGTTCGCACGGACGA 60.457 55.000 0.00 0.00 41.04 4.20
284 285 0.179145 ATAAGGTTCGCACGGACGAG 60.179 55.000 0.00 0.00 44.00 4.18
285 286 1.236616 TAAGGTTCGCACGGACGAGA 61.237 55.000 0.00 0.00 44.00 4.04
286 287 2.049802 GGTTCGCACGGACGAGAA 60.050 61.111 0.00 0.00 44.00 2.87
287 288 1.445582 GGTTCGCACGGACGAGAAT 60.446 57.895 0.00 0.00 44.00 2.40
288 289 1.683790 GGTTCGCACGGACGAGAATG 61.684 60.000 0.00 0.00 44.00 2.67
289 290 0.731514 GTTCGCACGGACGAGAATGA 60.732 55.000 0.00 0.00 44.00 2.57
290 291 0.456142 TTCGCACGGACGAGAATGAG 60.456 55.000 0.00 0.00 44.00 2.90
291 292 2.508891 CGCACGGACGAGAATGAGC 61.509 63.158 0.00 0.00 34.06 4.26
292 293 2.508891 GCACGGACGAGAATGAGCG 61.509 63.158 0.00 0.00 0.00 5.03
293 294 2.202623 ACGGACGAGAATGAGCGC 60.203 61.111 0.00 0.00 0.00 5.92
294 295 2.103143 CGGACGAGAATGAGCGCT 59.897 61.111 11.27 11.27 0.00 5.92
295 296 2.226896 CGGACGAGAATGAGCGCTG 61.227 63.158 18.48 0.00 0.00 5.18
296 297 1.139734 GGACGAGAATGAGCGCTGA 59.860 57.895 18.48 6.95 0.00 4.26
297 298 1.142778 GGACGAGAATGAGCGCTGAC 61.143 60.000 18.48 0.38 0.00 3.51
298 299 1.467556 GACGAGAATGAGCGCTGACG 61.468 60.000 18.48 9.21 44.07 4.35
299 300 1.515088 CGAGAATGAGCGCTGACGT 60.515 57.895 18.48 0.00 42.83 4.34
300 301 1.073216 CGAGAATGAGCGCTGACGTT 61.073 55.000 18.48 9.34 42.83 3.99
780 7330 2.112198 CGCCGCATTCAGCCCTTTA 61.112 57.895 0.00 0.00 41.38 1.85
784 7334 2.418609 GCCGCATTCAGCCCTTTAAAAT 60.419 45.455 0.00 0.00 41.38 1.82
1078 10280 3.365291 TACATCAGCCCGGACACGC 62.365 63.158 0.73 0.00 39.22 5.34
1388 10593 3.620785 GGAGGAGATCCGCGGCAT 61.621 66.667 23.51 15.30 38.67 4.40
1570 10781 0.991920 GATCCTCAGGGTTTGGGACA 59.008 55.000 0.00 0.00 31.59 4.02
1584 10795 1.609794 GGACAGGTCCGAGTCCCTT 60.610 63.158 20.19 0.00 46.79 3.95
1594 10805 0.174845 CGAGTCCCTTGACGCCAATA 59.825 55.000 0.00 0.00 46.51 1.90
1619 10830 2.507992 CGTGCCTCTCTTCCAGCG 60.508 66.667 0.00 0.00 0.00 5.18
1638 10852 3.880846 CCTGCGGCGGCTTGATTC 61.881 66.667 17.76 0.00 40.82 2.52
1640 10854 1.521457 CTGCGGCGGCTTGATTCTA 60.521 57.895 17.76 0.00 40.82 2.10
1642 10856 1.227263 GCGGCGGCTTGATTCTAGA 60.227 57.895 9.78 0.00 35.83 2.43
1643 10857 0.601311 GCGGCGGCTTGATTCTAGAT 60.601 55.000 9.78 0.00 35.83 1.98
1644 10858 1.336887 GCGGCGGCTTGATTCTAGATA 60.337 52.381 9.78 0.00 35.83 1.98
1645 10859 2.329379 CGGCGGCTTGATTCTAGATAC 58.671 52.381 7.61 0.00 0.00 2.24
1837 11059 5.759763 TGTATGATGATGCAGATGGTTACAC 59.240 40.000 0.00 0.00 0.00 2.90
1884 11726 4.276058 ACTCCCTTCGTCCGAAAATAAA 57.724 40.909 3.52 0.00 33.34 1.40
1886 11728 4.874396 ACTCCCTTCGTCCGAAAATAAATC 59.126 41.667 3.52 0.00 33.34 2.17
1888 11730 5.493809 TCCCTTCGTCCGAAAATAAATCTT 58.506 37.500 3.52 0.00 33.34 2.40
2040 13086 1.683365 CCACCAAATCCCCCTGCTG 60.683 63.158 0.00 0.00 0.00 4.41
2062 13108 1.379309 GAGGAGGCAGACTCTCGGT 60.379 63.158 2.39 0.00 45.83 4.69
2104 13150 2.313342 TCCTTGCTACTTCCTCTCTCCT 59.687 50.000 0.00 0.00 0.00 3.69
2111 13157 1.133606 ACTTCCTCTCTCCTCGGATCC 60.134 57.143 0.00 0.00 0.00 3.36
2116 13162 1.456518 CTCTCCTCGGATCCAGCCA 60.457 63.158 13.41 0.00 0.00 4.75
2133 13179 1.715019 CCACTTCTCCAACCCCCACA 61.715 60.000 0.00 0.00 0.00 4.17
2150 13196 2.285368 ACCTCCTCCGCCCATCAA 60.285 61.111 0.00 0.00 0.00 2.57
2252 13310 4.192006 GCTGTCTGCTCTGCATACATGC 62.192 54.545 7.25 7.25 42.85 4.06
2283 13373 1.808945 CTTCTCCGCTTGTGCATCTTT 59.191 47.619 0.00 0.00 39.64 2.52
2301 13391 0.179048 TTAGATGCAGCGGTGGATGG 60.179 55.000 26.61 0.00 34.30 3.51
2312 13402 1.322538 GGTGGATGGTTGGGTGATGC 61.323 60.000 0.00 0.00 0.00 3.91
2315 13405 3.112126 GATGGTTGGGTGATGCGCG 62.112 63.158 0.00 0.00 0.00 6.86
2351 13441 0.466124 GCCGGTCTCTAGCCAGATTT 59.534 55.000 1.90 0.00 0.00 2.17
2352 13442 1.808133 GCCGGTCTCTAGCCAGATTTG 60.808 57.143 1.90 0.00 0.00 2.32
2355 13445 2.482142 CGGTCTCTAGCCAGATTTGGTC 60.482 54.545 3.90 0.00 46.80 4.02
2356 13446 2.158885 GGTCTCTAGCCAGATTTGGTCC 60.159 54.545 3.90 0.00 46.80 4.46
2364 13454 1.750778 CCAGATTTGGTCCGATTTGGG 59.249 52.381 6.69 0.00 39.79 4.12
2365 13455 2.620367 CCAGATTTGGTCCGATTTGGGA 60.620 50.000 6.69 0.00 39.79 4.37
2380 13470 2.124695 GGATCGGGACCTTGGTGC 60.125 66.667 2.53 2.53 0.00 5.01
2414 13504 1.832883 GTTGTATGTGGACCATGGCA 58.167 50.000 13.04 1.19 34.86 4.92
2417 13507 1.153188 TATGTGGACCATGGCAGCG 60.153 57.895 13.04 0.00 34.86 5.18
2463 13553 2.962569 CCTGCTAGCCGCGCTATA 59.037 61.111 13.29 0.00 40.54 1.31
2464 13554 1.153939 CCTGCTAGCCGCGCTATAG 60.154 63.158 13.29 5.93 40.54 1.31
2465 13555 1.581954 CTGCTAGCCGCGCTATAGT 59.418 57.895 13.29 0.00 40.54 2.12
2466 13556 0.455295 CTGCTAGCCGCGCTATAGTC 60.455 60.000 13.29 2.50 40.54 2.59
2467 13557 0.889638 TGCTAGCCGCGCTATAGTCT 60.890 55.000 13.29 0.00 40.54 3.24
2468 13558 0.241481 GCTAGCCGCGCTATAGTCTT 59.759 55.000 5.56 0.00 40.54 3.01
2469 13559 1.336056 GCTAGCCGCGCTATAGTCTTT 60.336 52.381 5.56 0.00 40.54 2.52
2470 13560 2.320367 CTAGCCGCGCTATAGTCTTTG 58.680 52.381 5.56 0.00 40.54 2.77
2471 13561 0.876342 AGCCGCGCTATAGTCTTTGC 60.876 55.000 5.56 0.00 36.99 3.68
2472 13562 1.832411 GCCGCGCTATAGTCTTTGCC 61.832 60.000 5.56 0.00 0.00 4.52
2473 13563 0.249489 CCGCGCTATAGTCTTTGCCT 60.249 55.000 5.56 0.00 0.00 4.75
2474 13564 1.571919 CGCGCTATAGTCTTTGCCTT 58.428 50.000 5.56 0.00 0.00 4.35
2475 13565 1.258982 CGCGCTATAGTCTTTGCCTTG 59.741 52.381 5.56 0.00 0.00 3.61
2476 13566 1.003438 GCGCTATAGTCTTTGCCTTGC 60.003 52.381 0.00 0.00 0.00 4.01
2477 13567 1.258982 CGCTATAGTCTTTGCCTTGCG 59.741 52.381 0.84 0.00 35.22 4.85
2478 13568 1.599542 GCTATAGTCTTTGCCTTGCGG 59.400 52.381 0.84 0.00 0.00 5.69
2479 13569 2.906354 CTATAGTCTTTGCCTTGCGGT 58.094 47.619 0.00 0.00 0.00 5.68
2480 13570 1.453155 ATAGTCTTTGCCTTGCGGTG 58.547 50.000 0.00 0.00 0.00 4.94
2481 13571 0.605319 TAGTCTTTGCCTTGCGGTGG 60.605 55.000 0.00 0.00 0.00 4.61
2482 13572 2.193536 GTCTTTGCCTTGCGGTGGT 61.194 57.895 0.00 0.00 0.00 4.16
2483 13573 2.192861 TCTTTGCCTTGCGGTGGTG 61.193 57.895 0.00 0.00 0.00 4.17
2484 13574 2.124109 TTTGCCTTGCGGTGGTGA 60.124 55.556 0.00 0.00 0.00 4.02
2485 13575 1.526575 CTTTGCCTTGCGGTGGTGAT 61.527 55.000 0.00 0.00 0.00 3.06
2486 13576 1.112315 TTTGCCTTGCGGTGGTGATT 61.112 50.000 0.00 0.00 0.00 2.57
2487 13577 1.523154 TTGCCTTGCGGTGGTGATTC 61.523 55.000 0.00 0.00 0.00 2.52
2488 13578 1.971167 GCCTTGCGGTGGTGATTCA 60.971 57.895 0.00 0.00 0.00 2.57
2489 13579 1.926511 GCCTTGCGGTGGTGATTCAG 61.927 60.000 0.00 0.00 0.00 3.02
2490 13580 0.321564 CCTTGCGGTGGTGATTCAGA 60.322 55.000 0.00 0.00 0.00 3.27
2491 13581 1.679944 CCTTGCGGTGGTGATTCAGAT 60.680 52.381 0.00 0.00 0.00 2.90
2492 13582 1.667724 CTTGCGGTGGTGATTCAGATC 59.332 52.381 0.00 0.00 0.00 2.75
2493 13583 0.107703 TGCGGTGGTGATTCAGATCC 60.108 55.000 0.00 0.00 0.00 3.36
2494 13584 1.154205 GCGGTGGTGATTCAGATCCG 61.154 60.000 14.77 14.77 39.52 4.18
2495 13585 0.530650 CGGTGGTGATTCAGATCCGG 60.531 60.000 0.00 0.00 34.05 5.14
2496 13586 0.541863 GGTGGTGATTCAGATCCGGT 59.458 55.000 0.00 0.00 0.00 5.28
2497 13587 1.760613 GGTGGTGATTCAGATCCGGTA 59.239 52.381 0.00 0.00 0.00 4.02
2498 13588 2.169769 GGTGGTGATTCAGATCCGGTAA 59.830 50.000 0.00 0.00 0.00 2.85
2499 13589 3.458189 GTGGTGATTCAGATCCGGTAAG 58.542 50.000 0.00 0.00 0.00 2.34
2500 13590 2.158957 TGGTGATTCAGATCCGGTAAGC 60.159 50.000 0.00 0.00 0.00 3.09
2501 13591 2.484889 GTGATTCAGATCCGGTAAGCC 58.515 52.381 0.00 0.00 0.00 4.35
2513 13603 2.902705 GGTAAGCCGTATGGTGATGA 57.097 50.000 2.17 0.00 37.67 2.92
2514 13604 2.480845 GGTAAGCCGTATGGTGATGAC 58.519 52.381 2.17 0.00 37.67 3.06
2515 13605 2.102588 GGTAAGCCGTATGGTGATGACT 59.897 50.000 2.17 0.00 37.67 3.41
2516 13606 3.319972 GGTAAGCCGTATGGTGATGACTA 59.680 47.826 2.17 0.00 37.67 2.59
2517 13607 3.454371 AAGCCGTATGGTGATGACTAC 57.546 47.619 2.17 0.00 37.67 2.73
2518 13608 2.384828 AGCCGTATGGTGATGACTACA 58.615 47.619 2.17 0.00 37.67 2.74
2519 13609 2.764010 AGCCGTATGGTGATGACTACAA 59.236 45.455 2.17 0.00 37.67 2.41
2520 13610 3.196901 AGCCGTATGGTGATGACTACAAA 59.803 43.478 2.17 0.00 37.67 2.83
2521 13611 3.555956 GCCGTATGGTGATGACTACAAAG 59.444 47.826 2.17 0.00 37.67 2.77
2522 13612 4.755411 CCGTATGGTGATGACTACAAAGT 58.245 43.478 0.00 0.00 39.21 2.66
2523 13613 5.680408 GCCGTATGGTGATGACTACAAAGTA 60.680 44.000 2.17 0.00 34.82 2.24
2524 13614 5.747197 CCGTATGGTGATGACTACAAAGTAC 59.253 44.000 0.00 0.00 35.56 2.73
2525 13615 6.405508 CCGTATGGTGATGACTACAAAGTACT 60.406 42.308 0.00 0.00 35.56 2.73
2526 13616 6.472486 CGTATGGTGATGACTACAAAGTACTG 59.528 42.308 0.00 0.00 35.56 2.74
2527 13617 4.566004 TGGTGATGACTACAAAGTACTGC 58.434 43.478 0.00 0.00 35.56 4.40
2528 13618 3.612860 GGTGATGACTACAAAGTACTGCG 59.387 47.826 0.00 0.00 35.56 5.18
2529 13619 3.612860 GTGATGACTACAAAGTACTGCGG 59.387 47.826 0.00 0.00 35.56 5.69
2530 13620 2.074547 TGACTACAAAGTACTGCGGC 57.925 50.000 0.00 0.00 35.56 6.53
2531 13621 0.989890 GACTACAAAGTACTGCGGCG 59.010 55.000 0.51 0.51 35.56 6.46
2532 13622 0.599558 ACTACAAAGTACTGCGGCGA 59.400 50.000 12.98 0.00 32.84 5.54
2533 13623 0.989890 CTACAAAGTACTGCGGCGAC 59.010 55.000 12.98 2.02 0.00 5.19
2534 13624 0.599558 TACAAAGTACTGCGGCGACT 59.400 50.000 12.98 1.02 0.00 4.18
2535 13625 0.249741 ACAAAGTACTGCGGCGACTT 60.250 50.000 12.98 8.69 34.92 3.01
2536 13626 0.438830 CAAAGTACTGCGGCGACTTC 59.561 55.000 12.98 0.00 32.27 3.01
2537 13627 0.669625 AAAGTACTGCGGCGACTTCC 60.670 55.000 12.98 0.00 32.27 3.46
2538 13628 1.533469 AAGTACTGCGGCGACTTCCT 61.533 55.000 12.98 0.00 0.00 3.36
2539 13629 0.679002 AGTACTGCGGCGACTTCCTA 60.679 55.000 12.98 0.00 0.00 2.94
2540 13630 0.384669 GTACTGCGGCGACTTCCTAT 59.615 55.000 12.98 0.00 0.00 2.57
2541 13631 0.384309 TACTGCGGCGACTTCCTATG 59.616 55.000 12.98 0.00 0.00 2.23
2542 13632 1.592669 CTGCGGCGACTTCCTATGG 60.593 63.158 12.98 0.00 0.00 2.74
2543 13633 2.967615 GCGGCGACTTCCTATGGC 60.968 66.667 12.98 0.00 0.00 4.40
2544 13634 2.815308 CGGCGACTTCCTATGGCT 59.185 61.111 0.00 0.00 0.00 4.75
2545 13635 1.300233 CGGCGACTTCCTATGGCTC 60.300 63.158 0.00 0.00 0.00 4.70
2546 13636 1.069935 GGCGACTTCCTATGGCTCC 59.930 63.158 0.00 0.00 0.00 4.70
2547 13637 1.686325 GGCGACTTCCTATGGCTCCA 61.686 60.000 0.00 0.00 0.00 3.86
2548 13638 0.530870 GCGACTTCCTATGGCTCCAC 60.531 60.000 0.00 0.00 0.00 4.02
2549 13639 0.824109 CGACTTCCTATGGCTCCACA 59.176 55.000 0.00 0.00 0.00 4.17
2550 13640 1.207089 CGACTTCCTATGGCTCCACAA 59.793 52.381 0.00 0.00 0.00 3.33
2551 13641 2.633488 GACTTCCTATGGCTCCACAAC 58.367 52.381 0.00 0.00 0.00 3.32
2552 13642 1.066143 ACTTCCTATGGCTCCACAACG 60.066 52.381 0.00 0.00 0.00 4.10
2553 13643 1.207089 CTTCCTATGGCTCCACAACGA 59.793 52.381 0.00 0.00 0.00 3.85
2554 13644 1.496060 TCCTATGGCTCCACAACGAT 58.504 50.000 0.00 0.00 0.00 3.73
2555 13645 1.138859 TCCTATGGCTCCACAACGATG 59.861 52.381 0.00 0.00 0.00 3.84
2556 13646 1.138859 CCTATGGCTCCACAACGATGA 59.861 52.381 0.00 0.00 0.00 2.92
2557 13647 2.224378 CCTATGGCTCCACAACGATGAT 60.224 50.000 0.00 0.00 0.00 2.45
2558 13648 1.671979 ATGGCTCCACAACGATGATG 58.328 50.000 0.00 0.00 0.00 3.07
2559 13649 0.392863 TGGCTCCACAACGATGATGG 60.393 55.000 0.00 3.93 34.58 3.51
2560 13650 0.392998 GGCTCCACAACGATGATGGT 60.393 55.000 0.00 0.00 34.89 3.55
2561 13651 1.009829 GCTCCACAACGATGATGGTC 58.990 55.000 0.00 0.00 34.89 4.02
2562 13652 1.675714 GCTCCACAACGATGATGGTCA 60.676 52.381 0.00 0.00 34.89 4.02
2563 13653 2.910199 CTCCACAACGATGATGGTCAT 58.090 47.619 0.00 0.00 40.34 3.06
2574 13664 4.913376 GATGATGGTCATCGAAAGGTTTG 58.087 43.478 4.37 0.00 43.11 2.93
2575 13665 3.081061 TGATGGTCATCGAAAGGTTTGG 58.919 45.455 6.49 0.00 40.63 3.28
2576 13666 2.940994 TGGTCATCGAAAGGTTTGGA 57.059 45.000 0.00 0.00 0.00 3.53
2577 13667 2.778299 TGGTCATCGAAAGGTTTGGAG 58.222 47.619 0.00 0.00 0.00 3.86
2578 13668 2.084546 GGTCATCGAAAGGTTTGGAGG 58.915 52.381 0.00 0.00 0.00 4.30
2579 13669 2.084546 GTCATCGAAAGGTTTGGAGGG 58.915 52.381 0.00 0.00 29.61 4.30
2580 13670 1.004277 TCATCGAAAGGTTTGGAGGGG 59.996 52.381 0.00 0.00 29.61 4.79
2581 13671 1.073098 ATCGAAAGGTTTGGAGGGGT 58.927 50.000 0.00 0.00 0.00 4.95
2582 13672 0.848053 TCGAAAGGTTTGGAGGGGTT 59.152 50.000 0.00 0.00 0.00 4.11
2583 13673 2.056359 TCGAAAGGTTTGGAGGGGTTA 58.944 47.619 0.00 0.00 0.00 2.85
2584 13674 2.645797 TCGAAAGGTTTGGAGGGGTTAT 59.354 45.455 0.00 0.00 0.00 1.89
2585 13675 3.014623 CGAAAGGTTTGGAGGGGTTATC 58.985 50.000 0.00 0.00 0.00 1.75
2586 13676 3.308188 CGAAAGGTTTGGAGGGGTTATCT 60.308 47.826 0.00 0.00 0.00 1.98
2587 13677 4.270834 GAAAGGTTTGGAGGGGTTATCTC 58.729 47.826 0.00 0.00 0.00 2.75
2588 13678 3.222394 AGGTTTGGAGGGGTTATCTCT 57.778 47.619 0.00 0.00 0.00 3.10
2589 13679 3.116174 AGGTTTGGAGGGGTTATCTCTC 58.884 50.000 0.00 0.00 0.00 3.20
2590 13680 2.172930 GGTTTGGAGGGGTTATCTCTCC 59.827 54.545 4.03 4.03 45.36 3.71
2591 13681 3.116174 GTTTGGAGGGGTTATCTCTCCT 58.884 50.000 13.21 0.00 45.36 3.69
2592 13682 2.478872 TGGAGGGGTTATCTCTCCTG 57.521 55.000 13.21 0.00 45.36 3.86
2593 13683 1.937350 TGGAGGGGTTATCTCTCCTGA 59.063 52.381 13.21 0.00 45.36 3.86
2594 13684 2.321719 GGAGGGGTTATCTCTCCTGAC 58.678 57.143 3.70 0.00 42.70 3.51
2595 13685 2.090999 GGAGGGGTTATCTCTCCTGACT 60.091 54.545 3.70 0.00 42.70 3.41
2596 13686 3.227614 GAGGGGTTATCTCTCCTGACTC 58.772 54.545 0.00 0.00 0.00 3.36
2597 13687 1.957877 GGGGTTATCTCTCCTGACTCG 59.042 57.143 0.00 0.00 0.00 4.18
2598 13688 1.957877 GGGTTATCTCTCCTGACTCGG 59.042 57.143 0.00 0.00 0.00 4.63
2599 13689 2.657143 GGTTATCTCTCCTGACTCGGT 58.343 52.381 0.00 0.00 0.00 4.69
2600 13690 2.359531 GGTTATCTCTCCTGACTCGGTG 59.640 54.545 0.00 0.00 0.00 4.94
2601 13691 2.350057 TATCTCTCCTGACTCGGTGG 57.650 55.000 0.00 0.00 0.00 4.61
2602 13692 0.333312 ATCTCTCCTGACTCGGTGGT 59.667 55.000 0.00 0.00 0.00 4.16
2603 13693 0.112606 TCTCTCCTGACTCGGTGGTT 59.887 55.000 0.00 0.00 0.00 3.67
2604 13694 0.244994 CTCTCCTGACTCGGTGGTTG 59.755 60.000 0.00 0.00 0.00 3.77
2605 13695 0.178973 TCTCCTGACTCGGTGGTTGA 60.179 55.000 0.00 0.00 0.00 3.18
2606 13696 0.038159 CTCCTGACTCGGTGGTTGAC 60.038 60.000 0.00 0.00 0.00 3.18
2607 13697 0.469331 TCCTGACTCGGTGGTTGACT 60.469 55.000 0.00 0.00 0.00 3.41
2608 13698 0.393077 CCTGACTCGGTGGTTGACTT 59.607 55.000 0.00 0.00 0.00 3.01
2609 13699 1.605712 CCTGACTCGGTGGTTGACTTC 60.606 57.143 0.00 0.00 0.00 3.01
2610 13700 0.031585 TGACTCGGTGGTTGACTTCG 59.968 55.000 0.00 0.00 0.00 3.79
2611 13701 0.313043 GACTCGGTGGTTGACTTCGA 59.687 55.000 0.00 0.00 0.00 3.71
2612 13702 0.966920 ACTCGGTGGTTGACTTCGAT 59.033 50.000 0.00 0.00 0.00 3.59
2613 13703 1.336887 ACTCGGTGGTTGACTTCGATG 60.337 52.381 0.00 0.00 0.00 3.84
2614 13704 0.037697 TCGGTGGTTGACTTCGATGG 60.038 55.000 3.12 0.00 0.00 3.51
2615 13705 0.320421 CGGTGGTTGACTTCGATGGT 60.320 55.000 3.12 0.00 0.00 3.55
2616 13706 1.156736 GGTGGTTGACTTCGATGGTG 58.843 55.000 3.12 0.00 0.00 4.17
2617 13707 1.270625 GGTGGTTGACTTCGATGGTGA 60.271 52.381 3.12 0.00 0.00 4.02
2618 13708 2.069273 GTGGTTGACTTCGATGGTGAG 58.931 52.381 3.12 0.00 0.00 3.51
2619 13709 1.967779 TGGTTGACTTCGATGGTGAGA 59.032 47.619 3.12 0.00 0.00 3.27
2620 13710 2.567169 TGGTTGACTTCGATGGTGAGAT 59.433 45.455 3.12 0.00 0.00 2.75
2621 13711 3.007940 TGGTTGACTTCGATGGTGAGATT 59.992 43.478 3.12 0.00 0.00 2.40
2622 13712 4.003648 GGTTGACTTCGATGGTGAGATTT 58.996 43.478 3.12 0.00 0.00 2.17
2623 13713 5.175859 GGTTGACTTCGATGGTGAGATTTA 58.824 41.667 3.12 0.00 0.00 1.40
2624 13714 5.642063 GGTTGACTTCGATGGTGAGATTTAA 59.358 40.000 3.12 0.00 0.00 1.52
2625 13715 6.148811 GGTTGACTTCGATGGTGAGATTTAAA 59.851 38.462 3.12 0.00 0.00 1.52
2626 13716 7.148239 GGTTGACTTCGATGGTGAGATTTAAAT 60.148 37.037 0.00 0.00 0.00 1.40
2627 13717 7.921786 TGACTTCGATGGTGAGATTTAAATT 57.078 32.000 1.43 0.00 0.00 1.82
2628 13718 9.443323 TTGACTTCGATGGTGAGATTTAAATTA 57.557 29.630 1.43 0.00 0.00 1.40
2629 13719 9.613428 TGACTTCGATGGTGAGATTTAAATTAT 57.387 29.630 1.43 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.696917 GGAATTCAAAGTTGTGTATTCAGATTT 57.303 29.630 7.93 0.00 0.00 2.17
5 6 8.859090 TGGAATTCAAAGTTGTGTATTCAGATT 58.141 29.630 7.93 0.00 0.00 2.40
6 7 8.408043 TGGAATTCAAAGTTGTGTATTCAGAT 57.592 30.769 7.93 0.00 0.00 2.90
7 8 7.815840 TGGAATTCAAAGTTGTGTATTCAGA 57.184 32.000 7.93 0.00 0.00 3.27
8 9 7.062605 GCATGGAATTCAAAGTTGTGTATTCAG 59.937 37.037 7.93 8.13 0.00 3.02
9 10 6.867816 GCATGGAATTCAAAGTTGTGTATTCA 59.132 34.615 7.93 0.00 0.00 2.57
10 11 6.867816 TGCATGGAATTCAAAGTTGTGTATTC 59.132 34.615 7.93 0.00 0.00 1.75
11 12 6.646240 GTGCATGGAATTCAAAGTTGTGTATT 59.354 34.615 7.93 0.00 0.00 1.89
12 13 6.158598 GTGCATGGAATTCAAAGTTGTGTAT 58.841 36.000 7.93 0.00 0.00 2.29
13 14 5.068329 TGTGCATGGAATTCAAAGTTGTGTA 59.932 36.000 7.93 0.00 0.00 2.90
14 15 4.141981 TGTGCATGGAATTCAAAGTTGTGT 60.142 37.500 7.93 0.00 0.00 3.72
15 16 4.370049 TGTGCATGGAATTCAAAGTTGTG 58.630 39.130 7.93 0.00 0.00 3.33
16 17 4.099881 ACTGTGCATGGAATTCAAAGTTGT 59.900 37.500 7.93 0.00 0.00 3.32
17 18 4.624015 ACTGTGCATGGAATTCAAAGTTG 58.376 39.130 7.93 0.00 0.00 3.16
18 19 4.942761 ACTGTGCATGGAATTCAAAGTT 57.057 36.364 7.93 0.00 0.00 2.66
19 20 4.942761 AACTGTGCATGGAATTCAAAGT 57.057 36.364 7.93 0.00 0.00 2.66
20 21 5.291178 TGAAACTGTGCATGGAATTCAAAG 58.709 37.500 7.93 0.00 0.00 2.77
21 22 5.273674 TGAAACTGTGCATGGAATTCAAA 57.726 34.783 7.93 0.00 0.00 2.69
22 23 4.796946 GCTGAAACTGTGCATGGAATTCAA 60.797 41.667 7.93 0.00 0.00 2.69
23 24 3.305539 GCTGAAACTGTGCATGGAATTCA 60.306 43.478 7.93 0.72 0.00 2.57
24 25 3.057033 AGCTGAAACTGTGCATGGAATTC 60.057 43.478 0.00 0.00 0.00 2.17
25 26 2.895404 AGCTGAAACTGTGCATGGAATT 59.105 40.909 0.00 0.00 0.00 2.17
26 27 2.522185 AGCTGAAACTGTGCATGGAAT 58.478 42.857 0.00 0.00 0.00 3.01
27 28 1.985473 AGCTGAAACTGTGCATGGAA 58.015 45.000 0.00 0.00 0.00 3.53
28 29 1.881973 GAAGCTGAAACTGTGCATGGA 59.118 47.619 0.00 0.00 0.00 3.41
29 30 1.610038 TGAAGCTGAAACTGTGCATGG 59.390 47.619 0.00 0.00 0.00 3.66
30 31 3.570926 ATGAAGCTGAAACTGTGCATG 57.429 42.857 0.00 0.00 0.00 4.06
31 32 5.710513 TTTATGAAGCTGAAACTGTGCAT 57.289 34.783 0.00 0.00 0.00 3.96
32 33 5.512753 TTTTATGAAGCTGAAACTGTGCA 57.487 34.783 0.00 0.00 0.00 4.57
33 34 5.922544 ACATTTTATGAAGCTGAAACTGTGC 59.077 36.000 0.00 0.00 28.43 4.57
34 35 7.095940 CCAACATTTTATGAAGCTGAAACTGTG 60.096 37.037 0.00 0.00 29.60 3.66
35 36 6.925165 CCAACATTTTATGAAGCTGAAACTGT 59.075 34.615 0.00 0.00 30.10 3.55
36 37 6.128742 GCCAACATTTTATGAAGCTGAAACTG 60.129 38.462 0.00 0.00 0.00 3.16
37 38 5.928264 GCCAACATTTTATGAAGCTGAAACT 59.072 36.000 0.00 0.00 0.00 2.66
38 39 5.695816 TGCCAACATTTTATGAAGCTGAAAC 59.304 36.000 0.00 0.00 0.00 2.78
39 40 5.695816 GTGCCAACATTTTATGAAGCTGAAA 59.304 36.000 0.00 0.00 0.00 2.69
40 41 5.221402 TGTGCCAACATTTTATGAAGCTGAA 60.221 36.000 0.00 0.00 0.00 3.02
41 42 4.280425 TGTGCCAACATTTTATGAAGCTGA 59.720 37.500 0.00 0.00 0.00 4.26
42 43 4.558178 TGTGCCAACATTTTATGAAGCTG 58.442 39.130 0.00 0.00 0.00 4.24
43 44 4.870123 TGTGCCAACATTTTATGAAGCT 57.130 36.364 0.00 0.00 0.00 3.74
44 45 5.921004 TTTGTGCCAACATTTTATGAAGC 57.079 34.783 0.00 0.00 35.83 3.86
45 46 6.293353 GGGTTTTGTGCCAACATTTTATGAAG 60.293 38.462 0.00 0.00 35.83 3.02
46 47 5.529060 GGGTTTTGTGCCAACATTTTATGAA 59.471 36.000 0.00 0.00 35.83 2.57
47 48 5.059833 GGGTTTTGTGCCAACATTTTATGA 58.940 37.500 0.00 0.00 35.83 2.15
48 49 4.818546 TGGGTTTTGTGCCAACATTTTATG 59.181 37.500 0.00 0.00 35.83 1.90
49 50 5.041191 TGGGTTTTGTGCCAACATTTTAT 57.959 34.783 0.00 0.00 35.83 1.40
50 51 4.487714 TGGGTTTTGTGCCAACATTTTA 57.512 36.364 0.00 0.00 35.83 1.52
51 52 3.356529 TGGGTTTTGTGCCAACATTTT 57.643 38.095 0.00 0.00 35.83 1.82
52 53 3.574354 ATGGGTTTTGTGCCAACATTT 57.426 38.095 0.00 0.00 35.83 2.32
53 54 4.696479 TTATGGGTTTTGTGCCAACATT 57.304 36.364 0.00 0.00 35.83 2.71
54 55 4.696479 TTTATGGGTTTTGTGCCAACAT 57.304 36.364 0.00 0.00 35.83 2.71
55 56 4.696479 ATTTATGGGTTTTGTGCCAACA 57.304 36.364 0.00 0.00 0.00 3.33
56 57 6.483640 TGTTAATTTATGGGTTTTGTGCCAAC 59.516 34.615 0.00 0.00 0.00 3.77
57 58 6.591935 TGTTAATTTATGGGTTTTGTGCCAA 58.408 32.000 0.00 0.00 0.00 4.52
58 59 6.174720 TGTTAATTTATGGGTTTTGTGCCA 57.825 33.333 0.00 0.00 0.00 4.92
59 60 7.102993 AGATGTTAATTTATGGGTTTTGTGCC 58.897 34.615 0.00 0.00 0.00 5.01
60 61 8.546597 AAGATGTTAATTTATGGGTTTTGTGC 57.453 30.769 0.00 0.00 0.00 4.57
76 77 9.515020 CTCTGCAAAACTTTACAAAGATGTTAA 57.485 29.630 8.65 0.00 41.05 2.01
77 78 7.647715 GCTCTGCAAAACTTTACAAAGATGTTA 59.352 33.333 8.65 0.01 41.05 2.41
78 79 6.476706 GCTCTGCAAAACTTTACAAAGATGTT 59.523 34.615 8.65 0.00 41.05 2.71
79 80 5.979517 GCTCTGCAAAACTTTACAAAGATGT 59.020 36.000 8.65 0.00 43.74 3.06
80 81 6.211515 AGCTCTGCAAAACTTTACAAAGATG 58.788 36.000 8.65 5.85 39.31 2.90
81 82 6.396829 AGCTCTGCAAAACTTTACAAAGAT 57.603 33.333 8.65 0.00 39.31 2.40
82 83 5.835113 AGCTCTGCAAAACTTTACAAAGA 57.165 34.783 8.65 0.00 39.31 2.52
83 84 6.035843 TGAAGCTCTGCAAAACTTTACAAAG 58.964 36.000 0.13 0.13 41.73 2.77
84 85 5.960113 TGAAGCTCTGCAAAACTTTACAAA 58.040 33.333 0.00 0.00 0.00 2.83
85 86 5.574891 TGAAGCTCTGCAAAACTTTACAA 57.425 34.783 0.00 0.00 0.00 2.41
86 87 4.498009 GCTGAAGCTCTGCAAAACTTTACA 60.498 41.667 9.15 0.00 40.47 2.41
87 88 3.977579 GCTGAAGCTCTGCAAAACTTTAC 59.022 43.478 9.15 0.00 40.47 2.01
88 89 4.228912 GCTGAAGCTCTGCAAAACTTTA 57.771 40.909 9.15 0.00 40.47 1.85
89 90 3.089573 GCTGAAGCTCTGCAAAACTTT 57.910 42.857 9.15 0.00 40.47 2.66
90 91 2.789491 GCTGAAGCTCTGCAAAACTT 57.211 45.000 9.15 0.00 40.47 2.66
102 103 7.706179 TGTGCCAATATTTTATTAAGCTGAAGC 59.294 33.333 0.00 0.00 42.49 3.86
103 104 9.585099 TTGTGCCAATATTTTATTAAGCTGAAG 57.415 29.630 0.00 0.00 0.00 3.02
105 106 9.531942 CATTGTGCCAATATTTTATTAAGCTGA 57.468 29.630 0.00 0.00 0.00 4.26
106 107 8.277713 GCATTGTGCCAATATTTTATTAAGCTG 58.722 33.333 0.00 0.00 37.42 4.24
107 108 8.369218 GCATTGTGCCAATATTTTATTAAGCT 57.631 30.769 0.84 0.00 37.42 3.74
124 125 2.747396 TTTCTGAATGGGCATTGTGC 57.253 45.000 0.00 0.00 44.08 4.57
125 126 4.459390 TGATTTCTGAATGGGCATTGTG 57.541 40.909 0.00 0.00 0.00 3.33
126 127 4.468510 ACATGATTTCTGAATGGGCATTGT 59.531 37.500 0.00 0.00 0.00 2.71
127 128 5.018539 ACATGATTTCTGAATGGGCATTG 57.981 39.130 0.00 0.00 0.00 2.82
128 129 6.154877 TGTTACATGATTTCTGAATGGGCATT 59.845 34.615 0.00 0.00 0.00 3.56
129 130 5.657745 TGTTACATGATTTCTGAATGGGCAT 59.342 36.000 0.00 0.00 0.00 4.40
130 131 5.015515 TGTTACATGATTTCTGAATGGGCA 58.984 37.500 0.00 0.00 0.00 5.36
131 132 5.105797 TGTGTTACATGATTTCTGAATGGGC 60.106 40.000 0.00 0.00 0.00 5.36
132 133 6.324819 GTGTGTTACATGATTTCTGAATGGG 58.675 40.000 0.00 0.00 0.00 4.00
133 134 6.023435 CGTGTGTTACATGATTTCTGAATGG 58.977 40.000 0.00 0.00 37.29 3.16
134 135 6.830736 TCGTGTGTTACATGATTTCTGAATG 58.169 36.000 0.00 0.00 39.05 2.67
135 136 7.173218 AGTTCGTGTGTTACATGATTTCTGAAT 59.827 33.333 0.00 0.00 43.00 2.57
136 137 6.481976 AGTTCGTGTGTTACATGATTTCTGAA 59.518 34.615 0.00 0.00 43.00 3.02
137 138 5.989168 AGTTCGTGTGTTACATGATTTCTGA 59.011 36.000 0.00 0.00 43.00 3.27
138 139 6.228273 AGTTCGTGTGTTACATGATTTCTG 57.772 37.500 0.00 0.00 43.00 3.02
139 140 6.260050 ACAAGTTCGTGTGTTACATGATTTCT 59.740 34.615 0.00 2.73 43.00 2.52
140 141 6.427150 ACAAGTTCGTGTGTTACATGATTTC 58.573 36.000 0.00 0.84 43.00 2.17
141 142 6.371809 ACAAGTTCGTGTGTTACATGATTT 57.628 33.333 0.00 1.54 43.00 2.17
142 143 6.704493 ACTACAAGTTCGTGTGTTACATGATT 59.296 34.615 0.00 0.00 43.00 2.57
143 144 6.220930 ACTACAAGTTCGTGTGTTACATGAT 58.779 36.000 0.00 0.00 43.00 2.45
144 145 5.593968 ACTACAAGTTCGTGTGTTACATGA 58.406 37.500 0.00 0.00 41.94 3.07
145 146 5.900339 ACTACAAGTTCGTGTGTTACATG 57.100 39.130 0.00 0.00 36.48 3.21
146 147 6.520792 GAACTACAAGTTCGTGTGTTACAT 57.479 37.500 4.19 0.00 44.22 2.29
147 148 5.954434 GAACTACAAGTTCGTGTGTTACA 57.046 39.130 4.19 0.00 44.22 2.41
158 159 7.341445 TGTTGCTTATTTGGAACTACAAGTT 57.659 32.000 0.00 0.00 41.95 2.66
159 160 6.952773 TGTTGCTTATTTGGAACTACAAGT 57.047 33.333 0.00 0.00 38.74 3.16
160 161 6.363357 GCTTGTTGCTTATTTGGAACTACAAG 59.637 38.462 0.00 0.00 41.55 3.16
161 162 6.212955 GCTTGTTGCTTATTTGGAACTACAA 58.787 36.000 0.00 0.00 38.74 2.41
162 163 5.278758 GGCTTGTTGCTTATTTGGAACTACA 60.279 40.000 0.00 0.00 42.39 2.74
163 164 5.161358 GGCTTGTTGCTTATTTGGAACTAC 58.839 41.667 0.00 0.00 42.39 2.73
164 165 4.830046 TGGCTTGTTGCTTATTTGGAACTA 59.170 37.500 0.00 0.00 42.39 2.24
165 166 3.640967 TGGCTTGTTGCTTATTTGGAACT 59.359 39.130 0.00 0.00 42.39 3.01
166 167 3.988819 TGGCTTGTTGCTTATTTGGAAC 58.011 40.909 0.00 0.00 42.39 3.62
167 168 4.040217 ACATGGCTTGTTGCTTATTTGGAA 59.960 37.500 0.00 0.00 42.39 3.53
168 169 3.577848 ACATGGCTTGTTGCTTATTTGGA 59.422 39.130 0.00 0.00 42.39 3.53
169 170 3.928375 GACATGGCTTGTTGCTTATTTGG 59.072 43.478 7.51 0.00 39.18 3.28
170 171 4.558178 TGACATGGCTTGTTGCTTATTTG 58.442 39.130 7.51 0.00 39.18 2.32
171 172 4.870123 TGACATGGCTTGTTGCTTATTT 57.130 36.364 7.51 0.00 39.18 1.40
172 173 4.870123 TTGACATGGCTTGTTGCTTATT 57.130 36.364 7.51 0.00 39.18 1.40
173 174 5.047164 TCAATTGACATGGCTTGTTGCTTAT 60.047 36.000 3.38 0.00 39.18 1.73
174 175 4.280425 TCAATTGACATGGCTTGTTGCTTA 59.720 37.500 3.38 0.00 39.18 3.09
175 176 3.069872 TCAATTGACATGGCTTGTTGCTT 59.930 39.130 3.38 0.00 39.18 3.91
176 177 2.629137 TCAATTGACATGGCTTGTTGCT 59.371 40.909 3.38 0.00 39.18 3.91
177 178 3.029320 TCAATTGACATGGCTTGTTGC 57.971 42.857 3.38 0.00 39.18 4.17
178 179 6.309494 CAGTAATCAATTGACATGGCTTGTTG 59.691 38.462 11.07 2.41 39.18 3.33
179 180 6.015180 ACAGTAATCAATTGACATGGCTTGTT 60.015 34.615 11.07 0.28 39.18 2.83
180 181 5.477984 ACAGTAATCAATTGACATGGCTTGT 59.522 36.000 11.07 5.63 42.79 3.16
181 182 5.803461 CACAGTAATCAATTGACATGGCTTG 59.197 40.000 11.07 0.00 0.00 4.01
182 183 5.105635 CCACAGTAATCAATTGACATGGCTT 60.106 40.000 11.07 2.55 0.00 4.35
183 184 4.400251 CCACAGTAATCAATTGACATGGCT 59.600 41.667 11.07 2.41 0.00 4.75
184 185 4.158394 ACCACAGTAATCAATTGACATGGC 59.842 41.667 11.07 0.00 0.00 4.40
185 186 5.393352 CCACCACAGTAATCAATTGACATGG 60.393 44.000 11.07 13.60 0.00 3.66
186 187 5.183713 ACCACCACAGTAATCAATTGACATG 59.816 40.000 11.07 9.53 0.00 3.21
187 188 5.324409 ACCACCACAGTAATCAATTGACAT 58.676 37.500 11.07 5.55 0.00 3.06
188 189 4.724399 ACCACCACAGTAATCAATTGACA 58.276 39.130 11.07 0.00 0.00 3.58
189 190 4.142902 CGACCACCACAGTAATCAATTGAC 60.143 45.833 11.07 0.00 0.00 3.18
190 191 4.000325 CGACCACCACAGTAATCAATTGA 59.000 43.478 11.26 11.26 0.00 2.57
191 192 3.751175 ACGACCACCACAGTAATCAATTG 59.249 43.478 0.00 0.00 0.00 2.32
192 193 4.015872 ACGACCACCACAGTAATCAATT 57.984 40.909 0.00 0.00 0.00 2.32
193 194 3.695830 ACGACCACCACAGTAATCAAT 57.304 42.857 0.00 0.00 0.00 2.57
194 195 4.603989 TTACGACCACCACAGTAATCAA 57.396 40.909 0.00 0.00 0.00 2.57
195 196 4.039488 AGTTTACGACCACCACAGTAATCA 59.961 41.667 0.00 0.00 0.00 2.57
196 197 4.563061 AGTTTACGACCACCACAGTAATC 58.437 43.478 0.00 0.00 0.00 1.75
197 198 4.282703 AGAGTTTACGACCACCACAGTAAT 59.717 41.667 0.00 0.00 0.00 1.89
198 199 3.638160 AGAGTTTACGACCACCACAGTAA 59.362 43.478 0.00 0.00 0.00 2.24
199 200 3.005050 CAGAGTTTACGACCACCACAGTA 59.995 47.826 0.00 0.00 0.00 2.74
200 201 2.037144 AGAGTTTACGACCACCACAGT 58.963 47.619 0.00 0.00 0.00 3.55
201 202 2.404215 CAGAGTTTACGACCACCACAG 58.596 52.381 0.00 0.00 0.00 3.66
202 203 1.069513 CCAGAGTTTACGACCACCACA 59.930 52.381 0.00 0.00 0.00 4.17
203 204 1.342174 TCCAGAGTTTACGACCACCAC 59.658 52.381 0.00 0.00 0.00 4.16
204 205 1.616865 CTCCAGAGTTTACGACCACCA 59.383 52.381 0.00 0.00 0.00 4.17
205 206 1.672145 GCTCCAGAGTTTACGACCACC 60.672 57.143 0.00 0.00 0.00 4.61
206 207 1.272769 AGCTCCAGAGTTTACGACCAC 59.727 52.381 0.00 0.00 0.00 4.16
207 208 1.629043 AGCTCCAGAGTTTACGACCA 58.371 50.000 0.00 0.00 0.00 4.02
208 209 2.754002 ACTAGCTCCAGAGTTTACGACC 59.246 50.000 0.00 0.00 0.00 4.79
209 210 3.190953 ACACTAGCTCCAGAGTTTACGAC 59.809 47.826 0.00 0.00 0.00 4.34
210 211 3.418995 ACACTAGCTCCAGAGTTTACGA 58.581 45.455 0.00 0.00 0.00 3.43
211 212 3.851976 ACACTAGCTCCAGAGTTTACG 57.148 47.619 0.00 0.00 0.00 3.18
212 213 5.185442 ACCTAACACTAGCTCCAGAGTTTAC 59.815 44.000 4.90 0.00 32.58 2.01
213 214 5.331069 ACCTAACACTAGCTCCAGAGTTTA 58.669 41.667 4.90 0.00 32.58 2.01
214 215 4.161102 ACCTAACACTAGCTCCAGAGTTT 58.839 43.478 4.90 0.00 32.58 2.66
215 216 3.780626 ACCTAACACTAGCTCCAGAGTT 58.219 45.455 0.00 0.00 34.37 3.01
216 217 3.459710 ACCTAACACTAGCTCCAGAGT 57.540 47.619 0.00 0.00 0.00 3.24
217 218 5.394333 GGTTAACCTAACACTAGCTCCAGAG 60.394 48.000 17.83 0.00 40.39 3.35
218 219 4.465305 GGTTAACCTAACACTAGCTCCAGA 59.535 45.833 17.83 0.00 40.39 3.86
219 220 4.466726 AGGTTAACCTAACACTAGCTCCAG 59.533 45.833 26.03 0.00 46.48 3.86
220 221 4.422984 AGGTTAACCTAACACTAGCTCCA 58.577 43.478 26.03 0.00 46.48 3.86
234 235 3.674410 GCCGTGTAGTGTAGAGGTTAACC 60.674 52.174 17.41 17.41 0.00 2.85
235 236 3.505836 GCCGTGTAGTGTAGAGGTTAAC 58.494 50.000 0.00 0.00 0.00 2.01
236 237 2.493278 GGCCGTGTAGTGTAGAGGTTAA 59.507 50.000 0.00 0.00 0.00 2.01
237 238 2.094675 GGCCGTGTAGTGTAGAGGTTA 58.905 52.381 0.00 0.00 0.00 2.85
238 239 0.893447 GGCCGTGTAGTGTAGAGGTT 59.107 55.000 0.00 0.00 0.00 3.50
239 240 0.251474 TGGCCGTGTAGTGTAGAGGT 60.251 55.000 0.00 0.00 0.00 3.85
240 241 0.456221 CTGGCCGTGTAGTGTAGAGG 59.544 60.000 0.00 0.00 0.00 3.69
241 242 0.456221 CCTGGCCGTGTAGTGTAGAG 59.544 60.000 0.00 0.00 0.00 2.43
242 243 0.968901 CCCTGGCCGTGTAGTGTAGA 60.969 60.000 0.00 0.00 0.00 2.59
243 244 1.515954 CCCTGGCCGTGTAGTGTAG 59.484 63.158 0.00 0.00 0.00 2.74
244 245 1.985662 CCCCTGGCCGTGTAGTGTA 60.986 63.158 0.00 0.00 0.00 2.90
245 246 3.319198 CCCCTGGCCGTGTAGTGT 61.319 66.667 0.00 0.00 0.00 3.55
246 247 3.000819 TCCCCTGGCCGTGTAGTG 61.001 66.667 0.00 0.00 0.00 2.74
247 248 3.001406 GTCCCCTGGCCGTGTAGT 61.001 66.667 0.00 0.00 0.00 2.73
248 249 1.046472 TATGTCCCCTGGCCGTGTAG 61.046 60.000 0.00 0.00 0.00 2.74
249 250 0.618107 TTATGTCCCCTGGCCGTGTA 60.618 55.000 0.00 0.00 0.00 2.90
250 251 1.910580 CTTATGTCCCCTGGCCGTGT 61.911 60.000 0.00 0.00 0.00 4.49
251 252 1.153168 CTTATGTCCCCTGGCCGTG 60.153 63.158 0.00 0.00 0.00 4.94
252 253 2.375345 CCTTATGTCCCCTGGCCGT 61.375 63.158 0.00 0.00 0.00 5.68
253 254 1.921869 AACCTTATGTCCCCTGGCCG 61.922 60.000 0.00 0.00 0.00 6.13
254 255 0.106669 GAACCTTATGTCCCCTGGCC 60.107 60.000 0.00 0.00 0.00 5.36
255 256 0.463833 CGAACCTTATGTCCCCTGGC 60.464 60.000 0.00 0.00 0.00 4.85
256 257 0.463833 GCGAACCTTATGTCCCCTGG 60.464 60.000 0.00 0.00 0.00 4.45
257 258 0.251916 TGCGAACCTTATGTCCCCTG 59.748 55.000 0.00 0.00 0.00 4.45
258 259 0.252197 GTGCGAACCTTATGTCCCCT 59.748 55.000 0.00 0.00 0.00 4.79
259 260 1.087771 CGTGCGAACCTTATGTCCCC 61.088 60.000 0.00 0.00 0.00 4.81
260 261 1.087771 CCGTGCGAACCTTATGTCCC 61.088 60.000 0.00 0.00 0.00 4.46
261 262 0.108520 TCCGTGCGAACCTTATGTCC 60.109 55.000 0.00 0.00 0.00 4.02
262 263 0.997196 GTCCGTGCGAACCTTATGTC 59.003 55.000 0.00 0.00 0.00 3.06
263 264 0.734942 CGTCCGTGCGAACCTTATGT 60.735 55.000 0.00 0.00 0.00 2.29
264 265 0.457166 TCGTCCGTGCGAACCTTATG 60.457 55.000 0.00 0.00 37.99 1.90
265 266 0.179145 CTCGTCCGTGCGAACCTTAT 60.179 55.000 0.00 0.00 40.57 1.73
266 267 1.210931 CTCGTCCGTGCGAACCTTA 59.789 57.895 0.00 0.00 40.57 2.69
267 268 2.049433 CTCGTCCGTGCGAACCTT 60.049 61.111 0.00 0.00 40.57 3.50
268 269 1.874345 ATTCTCGTCCGTGCGAACCT 61.874 55.000 0.00 0.00 40.57 3.50
269 270 1.445582 ATTCTCGTCCGTGCGAACC 60.446 57.895 0.00 0.00 40.57 3.62
270 271 0.731514 TCATTCTCGTCCGTGCGAAC 60.732 55.000 0.00 0.00 40.57 3.95
271 272 0.456142 CTCATTCTCGTCCGTGCGAA 60.456 55.000 0.00 0.00 40.57 4.70
272 273 1.136774 CTCATTCTCGTCCGTGCGA 59.863 57.895 0.00 0.00 39.22 5.10
273 274 2.508891 GCTCATTCTCGTCCGTGCG 61.509 63.158 0.00 0.00 0.00 5.34
274 275 2.508891 CGCTCATTCTCGTCCGTGC 61.509 63.158 0.00 0.00 0.00 5.34
275 276 2.508891 GCGCTCATTCTCGTCCGTG 61.509 63.158 0.00 0.00 0.00 4.94
276 277 2.202623 GCGCTCATTCTCGTCCGT 60.203 61.111 0.00 0.00 0.00 4.69
277 278 2.103143 AGCGCTCATTCTCGTCCG 59.897 61.111 2.64 0.00 0.00 4.79
278 279 1.139734 TCAGCGCTCATTCTCGTCC 59.860 57.895 7.13 0.00 0.00 4.79
279 280 1.467556 CGTCAGCGCTCATTCTCGTC 61.468 60.000 7.13 0.00 0.00 4.20
280 281 1.515088 CGTCAGCGCTCATTCTCGT 60.515 57.895 7.13 0.00 0.00 4.18
281 282 1.073216 AACGTCAGCGCTCATTCTCG 61.073 55.000 7.13 8.82 42.83 4.04
282 283 0.368227 CAACGTCAGCGCTCATTCTC 59.632 55.000 7.13 0.00 42.83 2.87
283 284 0.038251 TCAACGTCAGCGCTCATTCT 60.038 50.000 7.13 0.00 42.83 2.40
284 285 0.368227 CTCAACGTCAGCGCTCATTC 59.632 55.000 7.13 0.00 42.83 2.67
285 286 0.319900 ACTCAACGTCAGCGCTCATT 60.320 50.000 7.13 0.00 42.83 2.57
286 287 0.526211 TACTCAACGTCAGCGCTCAT 59.474 50.000 7.13 0.00 42.83 2.90
287 288 0.312729 TTACTCAACGTCAGCGCTCA 59.687 50.000 7.13 0.00 42.83 4.26
288 289 1.415374 TTTACTCAACGTCAGCGCTC 58.585 50.000 7.13 0.00 42.83 5.03
289 290 1.792949 CTTTTACTCAACGTCAGCGCT 59.207 47.619 2.64 2.64 42.83 5.92
290 291 1.136336 CCTTTTACTCAACGTCAGCGC 60.136 52.381 0.00 0.00 42.83 5.92
291 292 2.400399 TCCTTTTACTCAACGTCAGCG 58.600 47.619 0.00 0.00 44.93 5.18
292 293 4.806342 TTTCCTTTTACTCAACGTCAGC 57.194 40.909 0.00 0.00 0.00 4.26
293 294 6.300354 ACATTTCCTTTTACTCAACGTCAG 57.700 37.500 0.00 0.00 0.00 3.51
294 295 6.425721 CCTACATTTCCTTTTACTCAACGTCA 59.574 38.462 0.00 0.00 0.00 4.35
295 296 6.128363 CCCTACATTTCCTTTTACTCAACGTC 60.128 42.308 0.00 0.00 0.00 4.34
296 297 5.704053 CCCTACATTTCCTTTTACTCAACGT 59.296 40.000 0.00 0.00 0.00 3.99
297 298 5.935789 TCCCTACATTTCCTTTTACTCAACG 59.064 40.000 0.00 0.00 0.00 4.10
298 299 6.940867 ACTCCCTACATTTCCTTTTACTCAAC 59.059 38.462 0.00 0.00 0.00 3.18
299 300 6.940298 CACTCCCTACATTTCCTTTTACTCAA 59.060 38.462 0.00 0.00 0.00 3.02
300 301 6.472887 CACTCCCTACATTTCCTTTTACTCA 58.527 40.000 0.00 0.00 0.00 3.41
494 497 2.362397 TCCATCTACGGAAGCATCACTC 59.638 50.000 0.00 0.00 29.93 3.51
777 7327 0.037790 GGGTGCGCTGCCATTTTAAA 60.038 50.000 19.97 0.00 0.00 1.52
780 7330 3.694538 GGGGTGCGCTGCCATTTT 61.695 61.111 19.97 0.00 0.00 1.82
986 7876 1.726853 GTACATGGTGCAGGACTCAC 58.273 55.000 0.00 0.00 0.00 3.51
1153 10355 2.044946 GGGCGTTTGGAGCTCCAT 60.045 61.111 35.42 0.00 46.97 3.41
1388 10593 4.020617 CCCCGAAGTGGCAGCAGA 62.021 66.667 0.00 0.00 35.87 4.26
1443 10648 2.915659 AAGACGGTGGCGAGGTCA 60.916 61.111 3.29 0.00 33.18 4.02
1570 10781 1.977544 CGTCAAGGGACTCGGACCT 60.978 63.158 0.00 0.00 42.05 3.85
1584 10795 0.179137 CGTGCTCTCTATTGGCGTCA 60.179 55.000 0.00 0.00 0.00 4.35
1594 10805 0.897863 AAGAGAGGCACGTGCTCTCT 60.898 55.000 38.40 38.40 46.95 3.10
1837 11059 5.968387 AATAAGTAAGATCAACTTCGCGG 57.032 39.130 14.64 0.00 38.18 6.46
1886 11728 9.659830 GTCACAAAGTTATACTAAACCAACAAG 57.340 33.333 0.00 0.00 0.00 3.16
1888 11730 8.614346 GTGTCACAAAGTTATACTAAACCAACA 58.386 33.333 0.00 0.00 0.00 3.33
2040 13086 1.675720 GAGAGTCTGCCTCCTCCAGC 61.676 65.000 0.00 0.00 41.47 4.85
2087 13133 1.408961 CCGAGGAGAGAGGAAGTAGCA 60.409 57.143 0.00 0.00 0.00 3.49
2104 13150 1.330655 GGAGAAGTGGCTGGATCCGA 61.331 60.000 7.39 0.00 0.00 4.55
2111 13157 1.303643 GGGGTTGGAGAAGTGGCTG 60.304 63.158 0.00 0.00 0.00 4.85
2116 13162 1.716028 GGTGTGGGGGTTGGAGAAGT 61.716 60.000 0.00 0.00 0.00 3.01
2133 13179 2.285368 TTGATGGGCGGAGGAGGT 60.285 61.111 0.00 0.00 0.00 3.85
2247 13305 0.676782 GAAGTTGTAGGCCGGCATGT 60.677 55.000 30.85 14.90 0.00 3.21
2252 13310 1.153628 CGGAGAAGTTGTAGGCCGG 60.154 63.158 0.00 0.00 35.42 6.13
2255 13313 1.079503 CAAGCGGAGAAGTTGTAGGC 58.920 55.000 0.00 0.00 0.00 3.93
2283 13373 1.337384 ACCATCCACCGCTGCATCTA 61.337 55.000 0.00 0.00 0.00 1.98
2356 13446 0.180406 AAGGTCCCGATCCCAAATCG 59.820 55.000 0.58 0.58 40.86 3.34
2364 13454 2.511600 CGCACCAAGGTCCCGATC 60.512 66.667 3.48 0.00 0.00 3.69
2365 13455 4.778143 GCGCACCAAGGTCCCGAT 62.778 66.667 0.30 0.00 0.00 4.18
2384 13474 0.035439 ACATACAACGGGAAGCCCTG 60.035 55.000 0.38 0.00 42.67 4.45
2396 13486 1.954733 GCTGCCATGGTCCACATACAA 60.955 52.381 14.67 0.00 37.84 2.41
2399 13489 1.153188 CGCTGCCATGGTCCACATA 60.153 57.895 14.67 0.00 37.84 2.29
2414 13504 2.032681 GAAGGCCAACACCTCGCT 59.967 61.111 5.01 0.00 39.93 4.93
2417 13507 1.966451 CACGGAAGGCCAACACCTC 60.966 63.158 5.01 0.00 39.93 3.85
2448 13538 0.889638 AGACTATAGCGCGGCTAGCA 60.890 55.000 18.24 0.00 44.66 3.49
2472 13562 1.667724 GATCTGAATCACCACCGCAAG 59.332 52.381 0.00 0.00 31.76 4.01
2473 13563 1.678728 GGATCTGAATCACCACCGCAA 60.679 52.381 0.00 0.00 33.21 4.85
2474 13564 0.107703 GGATCTGAATCACCACCGCA 60.108 55.000 0.00 0.00 33.21 5.69
2475 13565 1.154205 CGGATCTGAATCACCACCGC 61.154 60.000 0.00 0.00 33.21 5.68
2476 13566 0.530650 CCGGATCTGAATCACCACCG 60.531 60.000 2.08 0.00 38.83 4.94
2477 13567 0.541863 ACCGGATCTGAATCACCACC 59.458 55.000 9.46 0.00 33.21 4.61
2478 13568 3.458189 CTTACCGGATCTGAATCACCAC 58.542 50.000 9.46 0.00 33.21 4.16
2479 13569 2.158957 GCTTACCGGATCTGAATCACCA 60.159 50.000 9.46 0.00 33.21 4.17
2480 13570 2.484889 GCTTACCGGATCTGAATCACC 58.515 52.381 9.46 0.00 33.21 4.02
2481 13571 2.484889 GGCTTACCGGATCTGAATCAC 58.515 52.381 9.46 0.00 33.21 3.06
2482 13572 2.910688 GGCTTACCGGATCTGAATCA 57.089 50.000 9.46 0.00 33.21 2.57
2494 13584 2.102588 AGTCATCACCATACGGCTTACC 59.897 50.000 0.00 0.00 34.57 2.85
2495 13585 3.454371 AGTCATCACCATACGGCTTAC 57.546 47.619 0.00 0.00 34.57 2.34
2496 13586 3.955551 TGTAGTCATCACCATACGGCTTA 59.044 43.478 0.00 0.00 34.57 3.09
2497 13587 2.764010 TGTAGTCATCACCATACGGCTT 59.236 45.455 0.00 0.00 34.57 4.35
2498 13588 2.384828 TGTAGTCATCACCATACGGCT 58.615 47.619 0.00 0.00 34.57 5.52
2499 13589 2.882927 TGTAGTCATCACCATACGGC 57.117 50.000 0.00 0.00 34.57 5.68
2500 13590 4.755411 ACTTTGTAGTCATCACCATACGG 58.245 43.478 0.00 0.00 38.77 4.02
2501 13591 6.472486 CAGTACTTTGTAGTCATCACCATACG 59.528 42.308 0.00 0.00 35.78 3.06
2502 13592 6.255887 GCAGTACTTTGTAGTCATCACCATAC 59.744 42.308 0.00 0.00 35.78 2.39
2503 13593 6.338146 GCAGTACTTTGTAGTCATCACCATA 58.662 40.000 0.00 0.00 35.78 2.74
2504 13594 5.178797 GCAGTACTTTGTAGTCATCACCAT 58.821 41.667 0.00 0.00 35.78 3.55
2505 13595 4.566004 GCAGTACTTTGTAGTCATCACCA 58.434 43.478 0.00 0.00 35.78 4.17
2506 13596 3.612860 CGCAGTACTTTGTAGTCATCACC 59.387 47.826 0.00 0.00 35.78 4.02
2507 13597 3.612860 CCGCAGTACTTTGTAGTCATCAC 59.387 47.826 0.00 0.00 35.78 3.06
2508 13598 3.845178 CCGCAGTACTTTGTAGTCATCA 58.155 45.455 0.00 0.00 35.78 3.07
2509 13599 2.603560 GCCGCAGTACTTTGTAGTCATC 59.396 50.000 0.00 0.00 35.78 2.92
2510 13600 2.618053 GCCGCAGTACTTTGTAGTCAT 58.382 47.619 0.00 0.00 35.78 3.06
2511 13601 1.667756 CGCCGCAGTACTTTGTAGTCA 60.668 52.381 0.00 0.00 35.78 3.41
2512 13602 0.989890 CGCCGCAGTACTTTGTAGTC 59.010 55.000 0.00 0.00 35.78 2.59
2513 13603 0.599558 TCGCCGCAGTACTTTGTAGT 59.400 50.000 0.00 0.00 38.44 2.73
2514 13604 0.989890 GTCGCCGCAGTACTTTGTAG 59.010 55.000 0.00 0.00 0.00 2.74
2515 13605 0.599558 AGTCGCCGCAGTACTTTGTA 59.400 50.000 0.00 0.00 0.00 2.41
2516 13606 0.249741 AAGTCGCCGCAGTACTTTGT 60.250 50.000 0.00 0.00 29.25 2.83
2517 13607 0.438830 GAAGTCGCCGCAGTACTTTG 59.561 55.000 0.00 0.00 33.72 2.77
2518 13608 0.669625 GGAAGTCGCCGCAGTACTTT 60.670 55.000 0.00 0.00 33.72 2.66
2519 13609 1.080025 GGAAGTCGCCGCAGTACTT 60.080 57.895 0.00 3.17 36.20 2.24
2520 13610 0.679002 TAGGAAGTCGCCGCAGTACT 60.679 55.000 0.00 0.00 0.00 2.73
2521 13611 0.384669 ATAGGAAGTCGCCGCAGTAC 59.615 55.000 0.00 0.00 0.00 2.73
2522 13612 0.384309 CATAGGAAGTCGCCGCAGTA 59.616 55.000 0.00 0.00 0.00 2.74
2523 13613 1.141881 CATAGGAAGTCGCCGCAGT 59.858 57.895 0.00 0.00 0.00 4.40
2524 13614 1.592669 CCATAGGAAGTCGCCGCAG 60.593 63.158 0.00 0.00 0.00 5.18
2525 13615 2.499205 CCATAGGAAGTCGCCGCA 59.501 61.111 0.00 0.00 0.00 5.69
2526 13616 2.967615 GCCATAGGAAGTCGCCGC 60.968 66.667 0.00 0.00 0.00 6.53
2527 13617 1.300233 GAGCCATAGGAAGTCGCCG 60.300 63.158 0.00 0.00 0.00 6.46
2528 13618 1.069935 GGAGCCATAGGAAGTCGCC 59.930 63.158 0.00 0.00 0.00 5.54
2529 13619 0.530870 GTGGAGCCATAGGAAGTCGC 60.531 60.000 0.00 0.00 0.00 5.19
2530 13620 0.824109 TGTGGAGCCATAGGAAGTCG 59.176 55.000 0.00 0.00 0.00 4.18
2531 13621 2.633488 GTTGTGGAGCCATAGGAAGTC 58.367 52.381 0.00 0.00 0.00 3.01
2532 13622 1.066143 CGTTGTGGAGCCATAGGAAGT 60.066 52.381 0.00 0.00 0.00 3.01
2533 13623 1.207089 TCGTTGTGGAGCCATAGGAAG 59.793 52.381 0.00 0.00 0.00 3.46
2534 13624 1.271856 TCGTTGTGGAGCCATAGGAA 58.728 50.000 0.00 0.00 0.00 3.36
2535 13625 1.138859 CATCGTTGTGGAGCCATAGGA 59.861 52.381 0.00 0.00 0.00 2.94
2536 13626 1.138859 TCATCGTTGTGGAGCCATAGG 59.861 52.381 0.00 0.00 0.00 2.57
2537 13627 2.602257 TCATCGTTGTGGAGCCATAG 57.398 50.000 0.00 0.00 0.00 2.23
2538 13628 2.485302 CCATCATCGTTGTGGAGCCATA 60.485 50.000 8.54 0.00 34.94 2.74
2539 13629 1.671979 CATCATCGTTGTGGAGCCAT 58.328 50.000 0.00 0.00 0.00 4.40
2540 13630 0.392863 CCATCATCGTTGTGGAGCCA 60.393 55.000 8.54 0.00 34.94 4.75
2541 13631 0.392998 ACCATCATCGTTGTGGAGCC 60.393 55.000 16.82 0.00 36.82 4.70
2542 13632 1.009829 GACCATCATCGTTGTGGAGC 58.990 55.000 16.82 8.41 36.82 4.70
2543 13633 2.385013 TGACCATCATCGTTGTGGAG 57.615 50.000 16.82 0.26 36.82 3.86
2544 13634 2.905075 GATGACCATCATCGTTGTGGA 58.095 47.619 16.82 2.39 43.11 4.02
2553 13643 3.696051 CCAAACCTTTCGATGACCATCAT 59.304 43.478 10.24 0.00 40.34 2.45
2554 13644 3.081061 CCAAACCTTTCGATGACCATCA 58.919 45.455 10.24 0.00 37.69 3.07
2555 13645 3.343617 TCCAAACCTTTCGATGACCATC 58.656 45.455 0.04 0.04 34.56 3.51
2556 13646 3.347216 CTCCAAACCTTTCGATGACCAT 58.653 45.455 0.00 0.00 0.00 3.55
2557 13647 2.552155 CCTCCAAACCTTTCGATGACCA 60.552 50.000 0.00 0.00 0.00 4.02
2558 13648 2.084546 CCTCCAAACCTTTCGATGACC 58.915 52.381 0.00 0.00 0.00 4.02
2559 13649 2.084546 CCCTCCAAACCTTTCGATGAC 58.915 52.381 0.00 0.00 0.00 3.06
2560 13650 1.004277 CCCCTCCAAACCTTTCGATGA 59.996 52.381 0.00 0.00 0.00 2.92
2561 13651 1.271926 ACCCCTCCAAACCTTTCGATG 60.272 52.381 0.00 0.00 0.00 3.84
2562 13652 1.073098 ACCCCTCCAAACCTTTCGAT 58.927 50.000 0.00 0.00 0.00 3.59
2563 13653 0.848053 AACCCCTCCAAACCTTTCGA 59.152 50.000 0.00 0.00 0.00 3.71
2564 13654 2.572209 TAACCCCTCCAAACCTTTCG 57.428 50.000 0.00 0.00 0.00 3.46
2565 13655 4.018324 AGAGATAACCCCTCCAAACCTTTC 60.018 45.833 0.00 0.00 0.00 2.62
2566 13656 3.923425 AGAGATAACCCCTCCAAACCTTT 59.077 43.478 0.00 0.00 0.00 3.11
2567 13657 3.523972 GAGAGATAACCCCTCCAAACCTT 59.476 47.826 0.00 0.00 0.00 3.50
2568 13658 3.116174 GAGAGATAACCCCTCCAAACCT 58.884 50.000 0.00 0.00 0.00 3.50
2569 13659 2.172930 GGAGAGATAACCCCTCCAAACC 59.827 54.545 0.00 0.00 44.42 3.27
2570 13660 3.116174 AGGAGAGATAACCCCTCCAAAC 58.884 50.000 9.92 0.00 46.74 2.93
2571 13661 3.115390 CAGGAGAGATAACCCCTCCAAA 58.885 50.000 9.92 0.00 46.74 3.28
2572 13662 2.317900 TCAGGAGAGATAACCCCTCCAA 59.682 50.000 9.92 0.00 46.74 3.53
2573 13663 1.937350 TCAGGAGAGATAACCCCTCCA 59.063 52.381 9.92 0.00 46.74 3.86
2574 13664 2.090999 AGTCAGGAGAGATAACCCCTCC 60.091 54.545 0.00 0.00 45.16 4.30
2575 13665 3.227614 GAGTCAGGAGAGATAACCCCTC 58.772 54.545 0.00 0.00 0.00 4.30
2576 13666 2.423660 CGAGTCAGGAGAGATAACCCCT 60.424 54.545 0.00 0.00 0.00 4.79
2577 13667 1.957877 CGAGTCAGGAGAGATAACCCC 59.042 57.143 0.00 0.00 0.00 4.95
2578 13668 1.957877 CCGAGTCAGGAGAGATAACCC 59.042 57.143 0.00 0.00 0.00 4.11
2579 13669 2.359531 CACCGAGTCAGGAGAGATAACC 59.640 54.545 7.83 0.00 34.73 2.85
2580 13670 2.359531 CCACCGAGTCAGGAGAGATAAC 59.640 54.545 7.83 0.00 34.73 1.89
2581 13671 2.025226 ACCACCGAGTCAGGAGAGATAA 60.025 50.000 7.83 0.00 34.73 1.75
2582 13672 1.564818 ACCACCGAGTCAGGAGAGATA 59.435 52.381 7.83 0.00 34.73 1.98
2583 13673 0.333312 ACCACCGAGTCAGGAGAGAT 59.667 55.000 7.83 0.00 34.73 2.75
2584 13674 0.112606 AACCACCGAGTCAGGAGAGA 59.887 55.000 7.83 0.00 34.73 3.10
2585 13675 0.244994 CAACCACCGAGTCAGGAGAG 59.755 60.000 7.83 0.14 34.73 3.20
2586 13676 0.178973 TCAACCACCGAGTCAGGAGA 60.179 55.000 7.83 0.31 34.73 3.71
2587 13677 0.038159 GTCAACCACCGAGTCAGGAG 60.038 60.000 7.83 0.79 34.73 3.69
2588 13678 0.469331 AGTCAACCACCGAGTCAGGA 60.469 55.000 7.83 0.00 34.73 3.86
2589 13679 0.393077 AAGTCAACCACCGAGTCAGG 59.607 55.000 0.00 0.00 37.30 3.86
2590 13680 1.784525 GAAGTCAACCACCGAGTCAG 58.215 55.000 0.00 0.00 0.00 3.51
2591 13681 0.031585 CGAAGTCAACCACCGAGTCA 59.968 55.000 0.00 0.00 0.00 3.41
2592 13682 0.313043 TCGAAGTCAACCACCGAGTC 59.687 55.000 0.00 0.00 0.00 3.36
2593 13683 0.966920 ATCGAAGTCAACCACCGAGT 59.033 50.000 0.00 0.00 32.60 4.18
2594 13684 1.350193 CATCGAAGTCAACCACCGAG 58.650 55.000 0.00 0.00 32.60 4.63
2595 13685 0.037697 CCATCGAAGTCAACCACCGA 60.038 55.000 0.00 0.00 0.00 4.69
2596 13686 0.320421 ACCATCGAAGTCAACCACCG 60.320 55.000 0.00 0.00 0.00 4.94
2597 13687 1.156736 CACCATCGAAGTCAACCACC 58.843 55.000 0.00 0.00 0.00 4.61
2598 13688 2.069273 CTCACCATCGAAGTCAACCAC 58.931 52.381 0.00 0.00 0.00 4.16
2599 13689 1.967779 TCTCACCATCGAAGTCAACCA 59.032 47.619 0.00 0.00 0.00 3.67
2600 13690 2.743636 TCTCACCATCGAAGTCAACC 57.256 50.000 0.00 0.00 0.00 3.77
2601 13691 6.721571 TTAAATCTCACCATCGAAGTCAAC 57.278 37.500 0.00 0.00 0.00 3.18
2602 13692 7.921786 ATTTAAATCTCACCATCGAAGTCAA 57.078 32.000 0.00 0.00 0.00 3.18
2603 13693 7.921786 AATTTAAATCTCACCATCGAAGTCA 57.078 32.000 0.10 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.