Multiple sequence alignment - TraesCS5D01G471900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G471900 chr5D 100.000 5023 0 0 1 5023 512537019 512531997 0.000000e+00 9276.0
1 TraesCS5D01G471900 chr5D 83.227 1562 221 29 1109 2660 537089607 537088077 0.000000e+00 1395.0
2 TraesCS5D01G471900 chr5D 82.834 1602 228 35 1073 2660 537161306 537162874 0.000000e+00 1391.0
3 TraesCS5D01G471900 chr5B 91.051 2503 110 55 807 3245 643462629 643460177 0.000000e+00 3277.0
4 TraesCS5D01G471900 chr5B 83.685 1563 215 31 1109 2660 677538987 677537454 0.000000e+00 1437.0
5 TraesCS5D01G471900 chr5B 83.568 1564 215 33 1109 2660 677543510 677545043 0.000000e+00 1426.0
6 TraesCS5D01G471900 chr5B 83.588 981 90 27 3906 4850 643459652 643458707 0.000000e+00 854.0
7 TraesCS5D01G471900 chr5B 85.233 386 30 14 1 366 643463288 643462910 6.140000e-99 372.0
8 TraesCS5D01G471900 chr5B 84.971 346 22 15 3383 3713 643460086 643459756 1.740000e-84 324.0
9 TraesCS5D01G471900 chr5A 92.067 2269 116 35 619 2849 640726720 640724478 0.000000e+00 3134.0
10 TraesCS5D01G471900 chr5A 89.541 392 21 11 2867 3242 640724417 640724030 3.520000e-131 479.0
11 TraesCS5D01G471900 chr5A 86.914 405 27 15 101 495 640727318 640726930 9.990000e-117 431.0
12 TraesCS5D01G471900 chr5A 88.652 282 19 9 4232 4509 640723568 640723296 1.040000e-86 331.0
13 TraesCS5D01G471900 chr4A 83.611 1562 215 30 1109 2660 632991236 632989706 0.000000e+00 1428.0
14 TraesCS5D01G471900 chr4A 83.292 1598 220 35 1078 2660 632998287 632999852 0.000000e+00 1428.0
15 TraesCS5D01G471900 chr4A 81.117 1594 249 37 1102 2678 685836354 685834796 0.000000e+00 1229.0
16 TraesCS5D01G471900 chr2A 82.278 1580 239 33 1104 2669 18359819 18358267 0.000000e+00 1328.0
17 TraesCS5D01G471900 chr4D 80.718 1587 254 36 1109 2678 479542201 479540650 0.000000e+00 1188.0
18 TraesCS5D01G471900 chr4D 80.563 1564 262 40 1135 2677 488470336 488468794 0.000000e+00 1166.0
19 TraesCS5D01G471900 chr4B 80.515 1591 264 35 1102 2678 606766262 606764704 0.000000e+00 1179.0
20 TraesCS5D01G471900 chr4B 79.820 1556 282 29 1135 2674 624861424 624862963 0.000000e+00 1105.0
21 TraesCS5D01G471900 chr6D 97.436 39 1 0 532 570 312802119 312802081 3.250000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G471900 chr5D 512531997 512537019 5022 True 9276.00 9276 100.00000 1 5023 1 chr5D.!!$R1 5022
1 TraesCS5D01G471900 chr5D 537088077 537089607 1530 True 1395.00 1395 83.22700 1109 2660 1 chr5D.!!$R2 1551
2 TraesCS5D01G471900 chr5D 537161306 537162874 1568 False 1391.00 1391 82.83400 1073 2660 1 chr5D.!!$F1 1587
3 TraesCS5D01G471900 chr5B 677537454 677538987 1533 True 1437.00 1437 83.68500 1109 2660 1 chr5B.!!$R1 1551
4 TraesCS5D01G471900 chr5B 677543510 677545043 1533 False 1426.00 1426 83.56800 1109 2660 1 chr5B.!!$F1 1551
5 TraesCS5D01G471900 chr5B 643458707 643463288 4581 True 1206.75 3277 86.21075 1 4850 4 chr5B.!!$R2 4849
6 TraesCS5D01G471900 chr5A 640723296 640727318 4022 True 1093.75 3134 89.29350 101 4509 4 chr5A.!!$R1 4408
7 TraesCS5D01G471900 chr4A 632989706 632991236 1530 True 1428.00 1428 83.61100 1109 2660 1 chr4A.!!$R1 1551
8 TraesCS5D01G471900 chr4A 632998287 632999852 1565 False 1428.00 1428 83.29200 1078 2660 1 chr4A.!!$F1 1582
9 TraesCS5D01G471900 chr4A 685834796 685836354 1558 True 1229.00 1229 81.11700 1102 2678 1 chr4A.!!$R2 1576
10 TraesCS5D01G471900 chr2A 18358267 18359819 1552 True 1328.00 1328 82.27800 1104 2669 1 chr2A.!!$R1 1565
11 TraesCS5D01G471900 chr4D 479540650 479542201 1551 True 1188.00 1188 80.71800 1109 2678 1 chr4D.!!$R1 1569
12 TraesCS5D01G471900 chr4D 488468794 488470336 1542 True 1166.00 1166 80.56300 1135 2677 1 chr4D.!!$R2 1542
13 TraesCS5D01G471900 chr4B 606764704 606766262 1558 True 1179.00 1179 80.51500 1102 2678 1 chr4B.!!$R1 1576
14 TraesCS5D01G471900 chr4B 624861424 624862963 1539 False 1105.00 1105 79.82000 1135 2674 1 chr4B.!!$F1 1539

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 164 0.033504 TGCAGAAGAAGGTGACGGAC 59.966 55.0 0.00 0.0 0.0 4.79 F
613 812 0.178861 TGGCCCTCCTTTCTCTTCCT 60.179 55.0 0.00 0.0 0.0 3.36 F
614 813 0.544223 GGCCCTCCTTTCTCTTCCTC 59.456 60.0 0.00 0.0 0.0 3.71 F
615 814 0.544223 GCCCTCCTTTCTCTTCCTCC 59.456 60.0 0.00 0.0 0.0 4.30 F
1668 1924 1.435408 GCGCTCATCTTCTTGGCCTC 61.435 60.0 3.32 0.0 0.0 4.70 F
3267 3630 0.035439 CTGGATGGGTTTACACGGCT 60.035 55.0 0.00 0.0 0.0 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1957 2252 0.755686 GGATGAAGATGCCCGAGACT 59.244 55.000 0.00 0.00 0.00 3.24 R
2069 2364 4.832608 GCCCGCCTACAAGGACGG 62.833 72.222 16.83 16.83 47.00 4.79 R
2679 2974 2.437281 GAGATCAATCAAGGAGGGCTCA 59.563 50.000 0.00 0.00 0.00 4.26 R
2729 3024 2.417339 TCTCTCAACAGGAACGAACG 57.583 50.000 0.00 0.00 0.00 3.95 R
3464 4038 0.032540 CAGCCATCGATCCATCACGA 59.967 55.000 0.00 0.00 42.49 4.35 R
4811 5432 0.038166 GGTCACTGATTTCTGGGCCA 59.962 55.000 5.85 5.85 0.00 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 2.269241 CAGAAAGCGAGGTCCCCC 59.731 66.667 0.00 0.00 0.00 5.40
29 30 1.539124 AGAAAGCGAGGTCCCCCTT 60.539 57.895 0.00 0.00 42.86 3.95
32 33 1.716028 AAAGCGAGGTCCCCCTTGTT 61.716 55.000 0.00 0.00 42.86 2.83
33 34 2.359975 GCGAGGTCCCCCTTGTTG 60.360 66.667 0.00 0.00 42.86 3.33
35 36 2.035783 GAGGTCCCCCTTGTTGCC 59.964 66.667 0.00 0.00 42.86 4.52
36 37 2.452491 AGGTCCCCCTTGTTGCCT 60.452 61.111 0.00 0.00 38.13 4.75
37 38 1.151677 AGGTCCCCCTTGTTGCCTA 60.152 57.895 0.00 0.00 38.13 3.93
38 39 1.208165 AGGTCCCCCTTGTTGCCTAG 61.208 60.000 0.00 0.00 38.13 3.02
39 40 1.378646 GTCCCCCTTGTTGCCTAGC 60.379 63.158 0.00 0.00 0.00 3.42
41 42 3.134127 CCCCTTGTTGCCTAGCGC 61.134 66.667 0.00 0.00 38.31 5.92
42 43 3.499737 CCCTTGTTGCCTAGCGCG 61.500 66.667 0.00 0.00 42.08 6.86
43 44 3.499737 CCTTGTTGCCTAGCGCGG 61.500 66.667 8.83 0.00 42.08 6.46
57 60 4.873129 GCGGGCGAGCGATCAAGA 62.873 66.667 0.00 0.00 0.00 3.02
157 164 0.033504 TGCAGAAGAAGGTGACGGAC 59.966 55.000 0.00 0.00 0.00 4.79
167 174 1.070786 GTGACGGACCAGCAGGAAA 59.929 57.895 0.35 0.00 38.69 3.13
215 223 5.747545 GCTCTCCTCTCATAGTCTCATGGTA 60.748 48.000 0.00 0.00 0.00 3.25
247 258 1.550327 ACTCTCAAGTCTCCGCATGA 58.450 50.000 0.00 0.00 0.00 3.07
275 286 2.488153 GGTACTTGTCATCAAACAGCCC 59.512 50.000 0.00 0.00 32.87 5.19
284 295 0.821301 TCAAACAGCCCAACATCGCA 60.821 50.000 0.00 0.00 0.00 5.10
330 352 2.811542 AAGCGAGGAAGGAAGCTGCC 62.812 60.000 0.73 0.73 40.17 4.85
397 425 2.949678 GCGTGCGTGATCGATCGT 60.950 61.111 20.03 2.13 39.71 3.73
461 492 5.180492 GGAAACTTGTGATCCGTTAACATGA 59.820 40.000 6.39 1.80 0.00 3.07
463 494 5.147330 ACTTGTGATCCGTTAACATGAGA 57.853 39.130 6.39 0.00 0.00 3.27
498 533 1.242076 CCCAAGAGAGGCAAACACTG 58.758 55.000 0.00 0.00 0.00 3.66
519 718 2.358267 GCTAGTAGTACATGTCACGGCT 59.642 50.000 0.00 5.98 0.00 5.52
527 726 2.079158 ACATGTCACGGCTGATGAAAG 58.921 47.619 0.00 0.00 0.00 2.62
529 728 3.261580 CATGTCACGGCTGATGAAAGTA 58.738 45.455 0.00 0.00 0.00 2.24
530 729 3.394674 TGTCACGGCTGATGAAAGTAA 57.605 42.857 0.00 0.00 0.00 2.24
531 730 3.325870 TGTCACGGCTGATGAAAGTAAG 58.674 45.455 0.00 0.00 0.00 2.34
532 731 3.006430 TGTCACGGCTGATGAAAGTAAGA 59.994 43.478 0.00 0.00 0.00 2.10
533 732 3.368236 GTCACGGCTGATGAAAGTAAGAC 59.632 47.826 0.00 0.00 0.00 3.01
535 734 3.369147 CACGGCTGATGAAAGTAAGACTG 59.631 47.826 0.00 0.00 0.00 3.51
536 735 2.932614 CGGCTGATGAAAGTAAGACTGG 59.067 50.000 0.00 0.00 0.00 4.00
537 736 2.680339 GGCTGATGAAAGTAAGACTGGC 59.320 50.000 0.00 0.00 0.00 4.85
539 738 4.383118 GGCTGATGAAAGTAAGACTGGCTA 60.383 45.833 0.00 0.00 0.00 3.93
540 739 4.568760 GCTGATGAAAGTAAGACTGGCTAC 59.431 45.833 0.00 0.00 0.00 3.58
541 740 5.086104 TGATGAAAGTAAGACTGGCTACC 57.914 43.478 0.00 0.00 0.00 3.18
543 742 4.537135 TGAAAGTAAGACTGGCTACCTG 57.463 45.455 0.00 0.00 0.00 4.00
544 743 4.157246 TGAAAGTAAGACTGGCTACCTGA 58.843 43.478 0.00 0.00 0.00 3.86
545 744 4.591498 TGAAAGTAAGACTGGCTACCTGAA 59.409 41.667 0.00 0.00 0.00 3.02
546 745 5.071250 TGAAAGTAAGACTGGCTACCTGAAA 59.929 40.000 0.00 0.00 0.00 2.69
550 749 7.253905 AGTAAGACTGGCTACCTGAAATTTA 57.746 36.000 0.00 0.00 0.00 1.40
551 750 7.862675 AGTAAGACTGGCTACCTGAAATTTAT 58.137 34.615 0.00 0.00 0.00 1.40
552 751 8.329502 AGTAAGACTGGCTACCTGAAATTTATT 58.670 33.333 0.00 0.00 0.00 1.40
553 752 8.957466 GTAAGACTGGCTACCTGAAATTTATTT 58.043 33.333 0.00 0.00 0.00 1.40
554 753 8.422577 AAGACTGGCTACCTGAAATTTATTTT 57.577 30.769 0.00 0.00 0.00 1.82
555 754 7.830739 AGACTGGCTACCTGAAATTTATTTTG 58.169 34.615 0.00 0.00 0.00 2.44
556 755 6.935167 ACTGGCTACCTGAAATTTATTTTGG 58.065 36.000 0.00 0.00 33.17 3.28
557 756 6.070824 ACTGGCTACCTGAAATTTATTTTGGG 60.071 38.462 0.00 8.44 32.05 4.12
558 757 5.782845 TGGCTACCTGAAATTTATTTTGGGT 59.217 36.000 13.48 13.48 38.00 4.51
561 760 7.979537 GGCTACCTGAAATTTATTTTGGGTAAG 59.020 37.037 14.84 11.87 37.06 2.34
562 761 8.528643 GCTACCTGAAATTTATTTTGGGTAAGT 58.471 33.333 14.84 0.00 37.06 2.24
564 763 7.599171 ACCTGAAATTTATTTTGGGTAAGTCG 58.401 34.615 9.63 0.00 35.09 4.18
565 764 7.449086 ACCTGAAATTTATTTTGGGTAAGTCGA 59.551 33.333 9.63 0.00 35.09 4.20
572 771 8.411991 TTTATTTTGGGTAAGTCGATTTTCCT 57.588 30.769 14.44 0.00 0.00 3.36
573 772 9.517868 TTTATTTTGGGTAAGTCGATTTTCCTA 57.482 29.630 14.44 7.20 0.00 2.94
575 774 4.133013 TGGGTAAGTCGATTTTCCTAGC 57.867 45.455 14.44 0.00 0.00 3.42
576 775 3.118519 TGGGTAAGTCGATTTTCCTAGCC 60.119 47.826 14.44 8.83 0.00 3.93
577 776 3.118519 GGGTAAGTCGATTTTCCTAGCCA 60.119 47.826 14.44 0.00 0.00 4.75
578 777 4.444449 GGGTAAGTCGATTTTCCTAGCCAT 60.444 45.833 14.44 0.00 0.00 4.40
580 779 5.007724 GGTAAGTCGATTTTCCTAGCCATTG 59.992 44.000 8.77 0.00 0.00 2.82
581 780 3.545703 AGTCGATTTTCCTAGCCATTGG 58.454 45.455 0.00 0.00 0.00 3.16
582 781 2.618709 GTCGATTTTCCTAGCCATTGGG 59.381 50.000 4.53 0.00 37.18 4.12
583 782 2.241176 TCGATTTTCCTAGCCATTGGGT 59.759 45.455 12.79 12.79 37.19 4.51
585 784 4.080243 TCGATTTTCCTAGCCATTGGGTTA 60.080 41.667 13.49 0.00 34.28 2.85
587 786 5.221048 CGATTTTCCTAGCCATTGGGTTAAG 60.221 44.000 13.49 5.21 34.28 1.85
588 787 4.938575 TTTCCTAGCCATTGGGTTAAGA 57.061 40.909 13.49 5.01 34.28 2.10
591 790 3.394606 TCCTAGCCATTGGGTTAAGATCC 59.605 47.826 13.49 0.00 34.28 3.36
592 791 3.138283 CCTAGCCATTGGGTTAAGATCCA 59.862 47.826 13.49 0.00 34.28 3.41
593 792 3.756082 AGCCATTGGGTTAAGATCCAA 57.244 42.857 0.36 7.15 45.72 3.53
598 797 2.452600 TGGGTTAAGATCCAATGGCC 57.547 50.000 0.00 0.00 0.00 5.36
599 798 1.063266 TGGGTTAAGATCCAATGGCCC 60.063 52.381 0.00 0.00 35.59 5.80
600 799 1.217942 GGGTTAAGATCCAATGGCCCT 59.782 52.381 0.00 0.00 32.47 5.19
601 800 2.587522 GGTTAAGATCCAATGGCCCTC 58.412 52.381 0.00 0.00 0.00 4.30
602 801 2.587522 GTTAAGATCCAATGGCCCTCC 58.412 52.381 0.00 0.00 0.00 4.30
603 802 2.175715 GTTAAGATCCAATGGCCCTCCT 59.824 50.000 0.00 0.00 0.00 3.69
604 803 1.312884 AAGATCCAATGGCCCTCCTT 58.687 50.000 0.00 0.00 0.00 3.36
606 805 1.216427 AGATCCAATGGCCCTCCTTTC 59.784 52.381 0.00 0.00 0.00 2.62
607 806 1.216427 GATCCAATGGCCCTCCTTTCT 59.784 52.381 0.00 0.00 0.00 2.52
608 807 0.625849 TCCAATGGCCCTCCTTTCTC 59.374 55.000 0.00 0.00 0.00 2.87
609 808 0.627986 CCAATGGCCCTCCTTTCTCT 59.372 55.000 0.00 0.00 0.00 3.10
610 809 1.006400 CCAATGGCCCTCCTTTCTCTT 59.994 52.381 0.00 0.00 0.00 2.85
611 810 2.373224 CAATGGCCCTCCTTTCTCTTC 58.627 52.381 0.00 0.00 0.00 2.87
612 811 0.922626 ATGGCCCTCCTTTCTCTTCC 59.077 55.000 0.00 0.00 0.00 3.46
613 812 0.178861 TGGCCCTCCTTTCTCTTCCT 60.179 55.000 0.00 0.00 0.00 3.36
614 813 0.544223 GGCCCTCCTTTCTCTTCCTC 59.456 60.000 0.00 0.00 0.00 3.71
615 814 0.544223 GCCCTCCTTTCTCTTCCTCC 59.456 60.000 0.00 0.00 0.00 4.30
616 815 1.958288 CCCTCCTTTCTCTTCCTCCA 58.042 55.000 0.00 0.00 0.00 3.86
617 816 1.557371 CCCTCCTTTCTCTTCCTCCAC 59.443 57.143 0.00 0.00 0.00 4.02
640 839 3.000724 CGCTCCTCTCACAAAATCGATTC 59.999 47.826 11.83 0.00 0.00 2.52
668 867 8.441312 AATCAAATTGCAAATTCAGTCAACTT 57.559 26.923 1.71 0.00 0.00 2.66
677 876 8.817100 TGCAAATTCAGTCAACTTATATACTCG 58.183 33.333 0.00 0.00 0.00 4.18
680 879 9.871238 AAATTCAGTCAACTTATATACTCGTGT 57.129 29.630 0.00 0.00 0.00 4.49
681 880 8.858003 ATTCAGTCAACTTATATACTCGTGTG 57.142 34.615 0.00 0.00 0.00 3.82
683 882 8.496707 TCAGTCAACTTATATACTCGTGTGTA 57.503 34.615 0.00 0.00 0.00 2.90
684 883 8.610035 TCAGTCAACTTATATACTCGTGTGTAG 58.390 37.037 0.00 0.00 0.00 2.74
685 884 7.376336 CAGTCAACTTATATACTCGTGTGTAGC 59.624 40.741 0.00 0.00 0.00 3.58
686 885 7.282675 AGTCAACTTATATACTCGTGTGTAGCT 59.717 37.037 0.00 0.00 0.00 3.32
688 887 8.554528 TCAACTTATATACTCGTGTGTAGCTAC 58.445 37.037 17.30 17.30 0.00 3.58
690 889 8.085720 ACTTATATACTCGTGTGTAGCTACTG 57.914 38.462 23.84 11.57 0.00 2.74
691 890 7.714377 ACTTATATACTCGTGTGTAGCTACTGT 59.286 37.037 23.84 14.25 0.00 3.55
692 891 2.991434 ACTCGTGTGTAGCTACTGTG 57.009 50.000 23.84 13.66 0.00 3.66
693 892 2.228059 ACTCGTGTGTAGCTACTGTGT 58.772 47.619 23.84 14.20 0.00 3.72
694 893 2.031069 ACTCGTGTGTAGCTACTGTGTG 60.031 50.000 23.84 13.66 0.00 3.82
695 894 2.223745 TCGTGTGTAGCTACTGTGTGA 58.776 47.619 23.84 12.55 0.00 3.58
696 895 2.619646 TCGTGTGTAGCTACTGTGTGAA 59.380 45.455 23.84 0.00 0.00 3.18
697 896 3.067040 TCGTGTGTAGCTACTGTGTGAAA 59.933 43.478 23.84 0.00 0.00 2.69
698 897 3.799963 CGTGTGTAGCTACTGTGTGAAAA 59.200 43.478 23.84 0.00 0.00 2.29
699 898 4.447724 CGTGTGTAGCTACTGTGTGAAAAT 59.552 41.667 23.84 0.00 0.00 1.82
700 899 5.050363 CGTGTGTAGCTACTGTGTGAAAATT 60.050 40.000 23.84 0.00 0.00 1.82
701 900 6.144886 CGTGTGTAGCTACTGTGTGAAAATTA 59.855 38.462 23.84 0.00 0.00 1.40
702 901 7.306925 CGTGTGTAGCTACTGTGTGAAAATTAA 60.307 37.037 23.84 0.00 0.00 1.40
703 902 8.504005 GTGTGTAGCTACTGTGTGAAAATTAAT 58.496 33.333 23.84 0.00 0.00 1.40
750 949 9.462606 AAATGAAATTTCAAGGTAGGTAGTAGG 57.537 33.333 23.91 0.00 44.81 3.18
751 950 7.801893 TGAAATTTCAAGGTAGGTAGTAGGA 57.198 36.000 18.45 0.00 33.55 2.94
752 951 7.848128 TGAAATTTCAAGGTAGGTAGTAGGAG 58.152 38.462 18.45 0.00 33.55 3.69
753 952 5.873146 ATTTCAAGGTAGGTAGTAGGAGC 57.127 43.478 0.00 0.00 0.00 4.70
754 953 4.604784 TTCAAGGTAGGTAGTAGGAGCT 57.395 45.455 0.00 0.00 0.00 4.09
755 954 5.722172 TTCAAGGTAGGTAGTAGGAGCTA 57.278 43.478 0.00 0.00 0.00 3.32
756 955 5.307544 TCAAGGTAGGTAGTAGGAGCTAG 57.692 47.826 0.00 0.00 30.30 3.42
757 956 3.793819 AGGTAGGTAGTAGGAGCTAGC 57.206 52.381 6.62 6.62 44.43 3.42
758 957 2.425539 GGTAGGTAGTAGGAGCTAGCG 58.574 57.143 9.55 0.00 42.40 4.26
760 959 3.307621 GGTAGGTAGTAGGAGCTAGCGAT 60.308 52.174 9.55 1.65 42.40 4.58
761 960 4.081198 GGTAGGTAGTAGGAGCTAGCGATA 60.081 50.000 9.55 0.60 42.40 2.92
762 961 4.210724 AGGTAGTAGGAGCTAGCGATAG 57.789 50.000 9.55 2.61 42.40 2.08
763 962 3.839490 AGGTAGTAGGAGCTAGCGATAGA 59.161 47.826 12.82 0.00 42.40 1.98
765 964 5.045432 AGGTAGTAGGAGCTAGCGATAGAAT 60.045 44.000 12.82 0.00 42.40 2.40
768 967 7.336427 GGTAGTAGGAGCTAGCGATAGAATTTA 59.664 40.741 12.82 0.00 39.76 1.40
800 1004 9.424319 GTATAATATATTGTCCAGTCCACACAG 57.576 37.037 8.28 0.00 0.00 3.66
869 1078 4.621747 GCCTCTTTGATGCACTACTACACT 60.622 45.833 0.00 0.00 0.00 3.55
870 1079 5.105752 CCTCTTTGATGCACTACTACACTC 58.894 45.833 0.00 0.00 0.00 3.51
872 1081 6.346477 TCTTTGATGCACTACTACACTCTT 57.654 37.500 0.00 0.00 0.00 2.85
873 1082 7.363007 CCTCTTTGATGCACTACTACACTCTTA 60.363 40.741 0.00 0.00 0.00 2.10
902 1117 5.810080 ATCACTCCCTATTACTGCTAACC 57.190 43.478 0.00 0.00 0.00 2.85
917 1132 1.822990 CTAACCCGACCAGCAACTCTA 59.177 52.381 0.00 0.00 0.00 2.43
956 1171 2.693591 ACTCGACCCATCACACGATTAT 59.306 45.455 0.00 0.00 34.41 1.28
957 1172 3.132289 ACTCGACCCATCACACGATTATT 59.868 43.478 0.00 0.00 34.41 1.40
959 1174 3.383505 TCGACCCATCACACGATTATTCT 59.616 43.478 0.00 0.00 0.00 2.40
960 1175 4.119862 CGACCCATCACACGATTATTCTT 58.880 43.478 0.00 0.00 0.00 2.52
961 1176 4.025730 CGACCCATCACACGATTATTCTTG 60.026 45.833 0.00 0.00 0.00 3.02
964 1179 5.815740 ACCCATCACACGATTATTCTTGTAC 59.184 40.000 0.00 0.00 32.99 2.90
966 1181 6.201044 CCCATCACACGATTATTCTTGTACTC 59.799 42.308 0.00 0.00 32.99 2.59
967 1182 6.980978 CCATCACACGATTATTCTTGTACTCT 59.019 38.462 0.00 0.00 32.99 3.24
980 1213 5.141182 TCTTGTACTCTGACTCCTGAGTTT 58.859 41.667 9.59 0.00 45.50 2.66
981 1214 4.855715 TGTACTCTGACTCCTGAGTTTG 57.144 45.455 9.59 0.00 45.50 2.93
983 1216 4.893524 TGTACTCTGACTCCTGAGTTTGAA 59.106 41.667 9.59 0.00 45.50 2.69
984 1217 4.329462 ACTCTGACTCCTGAGTTTGAAC 57.671 45.455 0.63 0.00 45.50 3.18
985 1218 3.243569 ACTCTGACTCCTGAGTTTGAACG 60.244 47.826 0.63 0.00 45.50 3.95
996 1230 2.293399 GAGTTTGAACGCTCCAACCATT 59.707 45.455 0.00 0.00 29.36 3.16
1001 1235 5.461032 TTGAACGCTCCAACCATTAAAAT 57.539 34.783 0.00 0.00 0.00 1.82
1002 1236 4.804108 TGAACGCTCCAACCATTAAAATG 58.196 39.130 0.00 0.00 36.17 2.32
1046 1298 6.150307 ACCTGCAGAATATACTATCTGACGAG 59.850 42.308 17.39 0.00 44.64 4.18
1048 1300 6.238648 TGCAGAATATACTATCTGACGAGGA 58.761 40.000 13.47 0.00 44.64 3.71
1658 1914 3.222855 CCTCGAGGGCGCTCATCT 61.223 66.667 27.95 0.84 37.46 2.90
1668 1924 1.435408 GCGCTCATCTTCTTGGCCTC 61.435 60.000 3.32 0.00 0.00 4.70
1676 1932 1.615124 TTCTTGGCCTCGGGGATCA 60.615 57.895 4.80 0.00 33.58 2.92
2714 3009 3.793957 ATCTCTCGCCGGGGATCGT 62.794 63.158 22.85 5.87 37.11 3.73
2729 3024 4.838486 CGTCGCCGGTGCTCTCTC 62.838 72.222 11.05 0.00 34.43 3.20
2734 3029 2.202492 CCGGTGCTCTCTCGTTCG 60.202 66.667 0.00 0.00 0.00 3.95
2736 3031 1.081376 CGGTGCTCTCTCGTTCGTT 60.081 57.895 0.00 0.00 0.00 3.85
2737 3032 1.066114 CGGTGCTCTCTCGTTCGTTC 61.066 60.000 0.00 0.00 0.00 3.95
2739 3034 0.241481 GTGCTCTCTCGTTCGTTCCT 59.759 55.000 0.00 0.00 0.00 3.36
2740 3035 0.241213 TGCTCTCTCGTTCGTTCCTG 59.759 55.000 0.00 0.00 0.00 3.86
2741 3036 0.241481 GCTCTCTCGTTCGTTCCTGT 59.759 55.000 0.00 0.00 0.00 4.00
2742 3037 1.336056 GCTCTCTCGTTCGTTCCTGTT 60.336 52.381 0.00 0.00 0.00 3.16
2743 3038 2.320367 CTCTCTCGTTCGTTCCTGTTG 58.680 52.381 0.00 0.00 0.00 3.33
2744 3039 1.951602 TCTCTCGTTCGTTCCTGTTGA 59.048 47.619 0.00 0.00 0.00 3.18
2745 3040 2.031069 TCTCTCGTTCGTTCCTGTTGAG 60.031 50.000 0.00 0.00 0.00 3.02
2747 3042 2.031069 TCTCGTTCGTTCCTGTTGAGAG 60.031 50.000 0.00 0.00 0.00 3.20
2779 3074 4.119155 AGATTGGAGATTTTAGGGTGGGA 58.881 43.478 0.00 0.00 0.00 4.37
2782 3077 3.469859 TGGAGATTTTAGGGTGGGATGA 58.530 45.455 0.00 0.00 0.00 2.92
2785 3080 4.445019 GGAGATTTTAGGGTGGGATGAGAC 60.445 50.000 0.00 0.00 0.00 3.36
2936 3283 4.309099 TGTTACGATTTTACTGGCGAGTT 58.691 39.130 6.71 0.00 33.21 3.01
2985 3332 0.679505 TCTCCTGGGGAATATTCGCG 59.320 55.000 22.02 0.00 40.65 5.87
2986 3333 0.393077 CTCCTGGGGAATATTCGCGT 59.607 55.000 22.02 0.00 40.65 6.01
2991 3338 1.485480 TGGGGAATATTCGCGTGGTAA 59.515 47.619 22.02 0.00 40.65 2.85
2994 3341 3.243839 GGGGAATATTCGCGTGGTAAGTA 60.244 47.826 22.02 0.00 40.65 2.24
2998 3345 5.119743 GGAATATTCGCGTGGTAAGTAATCC 59.880 44.000 5.77 0.00 0.00 3.01
3050 3408 8.623903 TCATATCTGCATTTTCGCTTTCTAATT 58.376 29.630 0.00 0.00 0.00 1.40
3051 3409 8.899776 CATATCTGCATTTTCGCTTTCTAATTC 58.100 33.333 0.00 0.00 0.00 2.17
3057 3415 9.935682 TGCATTTTCGCTTTCTAATTCTAATAG 57.064 29.630 0.00 0.00 0.00 1.73
3142 3505 1.903404 GTTGTGGCTGTTGAGGGGG 60.903 63.158 0.00 0.00 0.00 5.40
3143 3506 2.391130 TTGTGGCTGTTGAGGGGGT 61.391 57.895 0.00 0.00 0.00 4.95
3247 3610 4.736896 GTGACGTGACGGGGCTCC 62.737 72.222 10.66 0.00 0.00 4.70
3253 3616 4.414956 TGACGGGGCTCCCTGGAT 62.415 66.667 17.58 0.00 46.47 3.41
3254 3617 3.866582 GACGGGGCTCCCTGGATG 61.867 72.222 17.58 0.46 46.47 3.51
3265 3628 3.168773 CCTGGATGGGTTTACACGG 57.831 57.895 0.00 0.00 0.00 4.94
3266 3629 1.029947 CCTGGATGGGTTTACACGGC 61.030 60.000 0.00 0.00 0.00 5.68
3267 3630 0.035439 CTGGATGGGTTTACACGGCT 60.035 55.000 0.00 0.00 0.00 5.52
3270 3633 1.612199 GGATGGGTTTACACGGCTTGA 60.612 52.381 0.00 0.00 0.00 3.02
3271 3634 1.467342 GATGGGTTTACACGGCTTGAC 59.533 52.381 0.00 0.00 0.00 3.18
3272 3635 0.881159 TGGGTTTACACGGCTTGACG 60.881 55.000 0.00 0.00 40.31 4.35
3273 3636 1.205820 GGTTTACACGGCTTGACGC 59.794 57.895 0.00 0.00 37.37 5.19
3274 3637 1.226030 GGTTTACACGGCTTGACGCT 61.226 55.000 0.00 0.00 39.13 5.07
3275 3638 0.163146 GTTTACACGGCTTGACGCTC 59.837 55.000 0.00 0.00 39.13 5.03
3276 3639 1.279527 TTTACACGGCTTGACGCTCG 61.280 55.000 0.00 0.00 39.13 5.03
3281 3644 3.482783 GGCTTGACGCTCGCACTC 61.483 66.667 0.00 0.00 39.13 3.51
3367 3877 8.531146 AGTTGCAAGTGTAAATATATTGCCTTT 58.469 29.630 5.84 0.00 44.30 3.11
3368 3878 9.150348 GTTGCAAGTGTAAATATATTGCCTTTT 57.850 29.630 0.00 0.00 44.30 2.27
3369 3879 9.717942 TTGCAAGTGTAAATATATTGCCTTTTT 57.282 25.926 0.00 0.00 44.30 1.94
3411 3921 1.177401 CCTTGCCTGGGCTACTTTTC 58.823 55.000 13.05 0.00 42.51 2.29
3464 4038 2.141535 GCTATGGAGCGATCGAGTTT 57.858 50.000 21.57 0.00 39.39 2.66
3486 4064 2.074576 GTGATGGATCGATGGCTGATG 58.925 52.381 0.54 0.00 0.00 3.07
3491 4069 2.899256 TGGATCGATGGCTGATGTGATA 59.101 45.455 0.54 0.00 0.00 2.15
3492 4070 3.516700 TGGATCGATGGCTGATGTGATAT 59.483 43.478 0.54 0.00 0.00 1.63
3493 4071 4.019950 TGGATCGATGGCTGATGTGATATT 60.020 41.667 0.54 0.00 0.00 1.28
3494 4072 4.940046 GGATCGATGGCTGATGTGATATTT 59.060 41.667 0.54 0.00 0.00 1.40
3500 4078 6.415867 CGATGGCTGATGTGATATTTTTGAAC 59.584 38.462 0.00 0.00 0.00 3.18
3509 4087 9.683069 GATGTGATATTTTTGAACAAGACAAGT 57.317 29.630 0.00 0.00 0.00 3.16
3518 4096 6.677781 TTGAACAAGACAAGTAAACAGAGG 57.322 37.500 0.00 0.00 0.00 3.69
3523 4101 3.733337 AGACAAGTAAACAGAGGCAGTG 58.267 45.455 0.00 0.00 0.00 3.66
3527 4105 3.669251 AGTAAACAGAGGCAGTGAGTC 57.331 47.619 0.00 0.00 0.00 3.36
3528 4106 2.965831 AGTAAACAGAGGCAGTGAGTCA 59.034 45.455 0.00 0.00 0.00 3.41
3529 4107 2.540265 AAACAGAGGCAGTGAGTCAG 57.460 50.000 0.00 0.00 0.00 3.51
3530 4108 1.418334 AACAGAGGCAGTGAGTCAGT 58.582 50.000 0.00 0.00 0.00 3.41
3543 4121 0.039978 AGTCAGTGAGTCAGTTCGCG 60.040 55.000 0.00 0.00 32.92 5.87
3596 4174 0.038801 GCCTGCCTTTTGAGTTGAGC 60.039 55.000 0.00 0.00 0.00 4.26
3639 4226 0.465460 TCCACTCACCACAACTTGCC 60.465 55.000 0.00 0.00 0.00 4.52
3640 4227 0.466189 CCACTCACCACAACTTGCCT 60.466 55.000 0.00 0.00 0.00 4.75
3641 4228 0.947244 CACTCACCACAACTTGCCTC 59.053 55.000 0.00 0.00 0.00 4.70
3642 4229 0.179018 ACTCACCACAACTTGCCTCC 60.179 55.000 0.00 0.00 0.00 4.30
3643 4230 0.179020 CTCACCACAACTTGCCTCCA 60.179 55.000 0.00 0.00 0.00 3.86
3644 4231 0.465460 TCACCACAACTTGCCTCCAC 60.465 55.000 0.00 0.00 0.00 4.02
3645 4232 0.466189 CACCACAACTTGCCTCCACT 60.466 55.000 0.00 0.00 0.00 4.00
3646 4233 0.258774 ACCACAACTTGCCTCCACTT 59.741 50.000 0.00 0.00 0.00 3.16
3647 4234 0.670162 CCACAACTTGCCTCCACTTG 59.330 55.000 0.00 0.00 0.00 3.16
3648 4235 1.679139 CACAACTTGCCTCCACTTGA 58.321 50.000 0.00 0.00 0.00 3.02
3649 4236 1.605710 CACAACTTGCCTCCACTTGAG 59.394 52.381 0.00 0.00 41.07 3.02
3654 4241 2.706190 ACTTGCCTCCACTTGAGTAGTT 59.294 45.455 0.00 0.00 39.65 2.24
3678 4265 9.678941 GTTAGAAAGAAAGACGAAATTTGGAAT 57.321 29.630 7.24 0.00 0.00 3.01
3696 4283 6.764308 TGGAATATTCTCTTGGCTTTTCTG 57.236 37.500 14.95 0.00 0.00 3.02
3707 4294 0.250770 GCTTTTCTGGACTTCGGGGT 60.251 55.000 0.00 0.00 0.00 4.95
3724 4311 2.295253 GGTACCACTCACTCCGAATG 57.705 55.000 7.15 0.00 0.00 2.67
3725 4312 1.641577 GTACCACTCACTCCGAATGC 58.358 55.000 0.00 0.00 0.00 3.56
3726 4313 1.204941 GTACCACTCACTCCGAATGCT 59.795 52.381 0.00 0.00 0.00 3.79
3727 4314 1.557099 ACCACTCACTCCGAATGCTA 58.443 50.000 0.00 0.00 0.00 3.49
3729 4316 1.550065 CACTCACTCCGAATGCTACG 58.450 55.000 0.00 0.00 0.00 3.51
3731 4318 2.025155 ACTCACTCCGAATGCTACGAT 58.975 47.619 0.00 0.00 0.00 3.73
3732 4319 2.223595 ACTCACTCCGAATGCTACGATG 60.224 50.000 0.00 0.00 0.00 3.84
3733 4320 1.067060 TCACTCCGAATGCTACGATGG 59.933 52.381 0.00 0.00 0.00 3.51
3735 4322 1.338337 ACTCCGAATGCTACGATGGAG 59.662 52.381 4.60 4.60 46.58 3.86
3736 4323 0.673985 TCCGAATGCTACGATGGAGG 59.326 55.000 0.00 0.00 0.00 4.30
3738 4325 1.273606 CCGAATGCTACGATGGAGGAT 59.726 52.381 0.00 0.00 0.00 3.24
3739 4326 2.332104 CGAATGCTACGATGGAGGATG 58.668 52.381 0.00 0.00 0.00 3.51
3742 4329 1.332195 TGCTACGATGGAGGATGGAG 58.668 55.000 0.00 0.00 0.00 3.86
3744 4331 2.002505 CTACGATGGAGGATGGAGGT 57.997 55.000 0.00 0.00 0.00 3.85
3745 4332 2.818216 GCTACGATGGAGGATGGAGGTA 60.818 54.545 0.00 0.00 0.00 3.08
3747 4334 1.261480 CGATGGAGGATGGAGGTAGG 58.739 60.000 0.00 0.00 0.00 3.18
3749 4336 1.150135 GATGGAGGATGGAGGTAGGGA 59.850 57.143 0.00 0.00 0.00 4.20
3750 4337 0.563173 TGGAGGATGGAGGTAGGGAG 59.437 60.000 0.00 0.00 0.00 4.30
3751 4338 0.861155 GGAGGATGGAGGTAGGGAGA 59.139 60.000 0.00 0.00 0.00 3.71
3752 4339 1.203125 GGAGGATGGAGGTAGGGAGAG 60.203 61.905 0.00 0.00 0.00 3.20
3753 4340 0.863956 AGGATGGAGGTAGGGAGAGG 59.136 60.000 0.00 0.00 0.00 3.69
3759 4346 0.556747 GAGGTAGGGAGAGGGCAGTA 59.443 60.000 0.00 0.00 0.00 2.74
3760 4347 0.558712 AGGTAGGGAGAGGGCAGTAG 59.441 60.000 0.00 0.00 0.00 2.57
3761 4348 1.116536 GGTAGGGAGAGGGCAGTAGC 61.117 65.000 0.00 0.00 41.10 3.58
3771 4358 3.264897 GCAGTAGCCCGTGATGCG 61.265 66.667 0.00 0.00 40.95 4.73
3773 4360 2.167219 CAGTAGCCCGTGATGCGTG 61.167 63.158 0.00 0.00 39.32 5.34
3788 4375 2.410785 GCGTGATGCATGCATGTATT 57.589 45.000 36.73 14.80 44.78 1.89
3790 4377 2.567067 CGTGATGCATGCATGTATTCG 58.433 47.619 36.73 27.11 36.70 3.34
3791 4378 2.221517 CGTGATGCATGCATGTATTCGA 59.778 45.455 36.73 18.85 36.70 3.71
3792 4379 3.663493 CGTGATGCATGCATGTATTCGAG 60.663 47.826 36.73 20.61 36.70 4.04
3793 4380 3.249320 GTGATGCATGCATGTATTCGAGT 59.751 43.478 36.73 10.61 36.70 4.18
3794 4381 3.878699 TGATGCATGCATGTATTCGAGTT 59.121 39.130 36.73 10.02 36.70 3.01
3795 4382 5.050159 GTGATGCATGCATGTATTCGAGTTA 60.050 40.000 36.73 4.36 36.70 2.24
3797 4384 4.441792 TGCATGCATGTATTCGAGTTACT 58.558 39.130 26.79 0.00 0.00 2.24
3799 4386 7.978985 ATGCATGCATGTATTCGAGTTACTCG 61.979 42.308 31.74 26.56 43.77 4.18
3812 4399 5.720261 GAGTTACTCGAATCAAATGGGAC 57.280 43.478 0.00 0.00 0.00 4.46
3814 4401 2.420058 ACTCGAATCAAATGGGACCC 57.580 50.000 2.45 2.45 0.00 4.46
3815 4402 1.299541 CTCGAATCAAATGGGACCCG 58.700 55.000 5.91 0.00 0.00 5.28
3816 4403 0.616371 TCGAATCAAATGGGACCCGT 59.384 50.000 5.91 1.59 0.00 5.28
3817 4404 0.732571 CGAATCAAATGGGACCCGTG 59.267 55.000 5.84 4.06 0.00 4.94
3818 4405 1.834188 GAATCAAATGGGACCCGTGT 58.166 50.000 5.84 0.00 0.00 4.49
3819 4406 1.472480 GAATCAAATGGGACCCGTGTG 59.528 52.381 16.19 16.19 0.00 3.82
3820 4407 0.404040 ATCAAATGGGACCCGTGTGT 59.596 50.000 20.68 7.36 30.17 3.72
3821 4408 0.536233 TCAAATGGGACCCGTGTGTG 60.536 55.000 20.68 12.60 30.17 3.82
3822 4409 0.821711 CAAATGGGACCCGTGTGTGT 60.822 55.000 14.30 0.00 0.00 3.72
3823 4410 0.821711 AAATGGGACCCGTGTGTGTG 60.822 55.000 5.84 0.00 0.00 3.82
3824 4411 3.842925 ATGGGACCCGTGTGTGTGC 62.843 63.158 3.76 0.00 0.00 4.57
3834 4421 3.474904 GTGTGTGCGCGCGTGATA 61.475 61.111 32.35 13.95 0.00 2.15
3835 4422 3.474904 TGTGTGCGCGCGTGATAC 61.475 61.111 32.35 24.40 0.00 2.24
3836 4423 3.179265 GTGTGCGCGCGTGATACT 61.179 61.111 32.35 0.00 0.00 2.12
3837 4424 1.870458 GTGTGCGCGCGTGATACTA 60.870 57.895 32.35 2.27 0.00 1.82
3838 4425 1.153997 TGTGCGCGCGTGATACTAA 60.154 52.632 32.35 1.38 0.00 2.24
3839 4426 0.526739 TGTGCGCGCGTGATACTAAT 60.527 50.000 32.35 0.00 0.00 1.73
3840 4427 0.158928 GTGCGCGCGTGATACTAATC 59.841 55.000 32.35 10.81 0.00 1.75
3841 4428 0.937699 TGCGCGCGTGATACTAATCC 60.938 55.000 32.35 10.25 0.00 3.01
3842 4429 0.937699 GCGCGCGTGATACTAATCCA 60.938 55.000 32.35 0.00 0.00 3.41
3843 4430 1.053048 CGCGCGTGATACTAATCCAG 58.947 55.000 24.19 0.00 0.00 3.86
3844 4431 1.334689 CGCGCGTGATACTAATCCAGA 60.335 52.381 24.19 0.00 0.00 3.86
3845 4432 2.052157 GCGCGTGATACTAATCCAGAC 58.948 52.381 8.43 0.00 0.00 3.51
3846 4433 2.287668 GCGCGTGATACTAATCCAGACT 60.288 50.000 8.43 0.00 0.00 3.24
3847 4434 3.556513 CGCGTGATACTAATCCAGACTC 58.443 50.000 0.00 0.00 0.00 3.36
3848 4435 3.609644 CGCGTGATACTAATCCAGACTCC 60.610 52.174 0.00 0.00 0.00 3.85
3849 4436 3.570550 GCGTGATACTAATCCAGACTCCT 59.429 47.826 0.00 0.00 0.00 3.69
3850 4437 4.320641 GCGTGATACTAATCCAGACTCCTC 60.321 50.000 0.00 0.00 0.00 3.71
3851 4438 5.067273 CGTGATACTAATCCAGACTCCTCT 58.933 45.833 0.00 0.00 0.00 3.69
3852 4439 5.533154 CGTGATACTAATCCAGACTCCTCTT 59.467 44.000 0.00 0.00 0.00 2.85
3853 4440 6.039941 CGTGATACTAATCCAGACTCCTCTTT 59.960 42.308 0.00 0.00 0.00 2.52
3854 4441 7.416890 CGTGATACTAATCCAGACTCCTCTTTT 60.417 40.741 0.00 0.00 0.00 2.27
3855 4442 8.261522 GTGATACTAATCCAGACTCCTCTTTTT 58.738 37.037 0.00 0.00 0.00 1.94
3856 4443 9.488762 TGATACTAATCCAGACTCCTCTTTTTA 57.511 33.333 0.00 0.00 0.00 1.52
3859 4446 8.152023 ACTAATCCAGACTCCTCTTTTTATGT 57.848 34.615 0.00 0.00 0.00 2.29
3860 4447 8.043710 ACTAATCCAGACTCCTCTTTTTATGTG 58.956 37.037 0.00 0.00 0.00 3.21
3861 4448 5.825593 TCCAGACTCCTCTTTTTATGTGT 57.174 39.130 0.00 0.00 0.00 3.72
3862 4449 5.551233 TCCAGACTCCTCTTTTTATGTGTG 58.449 41.667 0.00 0.00 0.00 3.82
3863 4450 5.071788 TCCAGACTCCTCTTTTTATGTGTGT 59.928 40.000 0.00 0.00 0.00 3.72
3864 4451 5.180117 CCAGACTCCTCTTTTTATGTGTGTG 59.820 44.000 0.00 0.00 0.00 3.82
3865 4452 5.760253 CAGACTCCTCTTTTTATGTGTGTGT 59.240 40.000 0.00 0.00 0.00 3.72
3866 4453 5.760253 AGACTCCTCTTTTTATGTGTGTGTG 59.240 40.000 0.00 0.00 0.00 3.82
3867 4454 5.680619 ACTCCTCTTTTTATGTGTGTGTGA 58.319 37.500 0.00 0.00 0.00 3.58
3868 4455 6.119536 ACTCCTCTTTTTATGTGTGTGTGAA 58.880 36.000 0.00 0.00 0.00 3.18
3869 4456 6.260936 ACTCCTCTTTTTATGTGTGTGTGAAG 59.739 38.462 0.00 0.00 0.00 3.02
3870 4457 6.353323 TCCTCTTTTTATGTGTGTGTGAAGA 58.647 36.000 0.00 0.00 0.00 2.87
3871 4458 6.998074 TCCTCTTTTTATGTGTGTGTGAAGAT 59.002 34.615 0.00 0.00 0.00 2.40
3872 4459 7.041167 TCCTCTTTTTATGTGTGTGTGAAGATG 60.041 37.037 0.00 0.00 0.00 2.90
3873 4460 7.041167 CCTCTTTTTATGTGTGTGTGAAGATGA 60.041 37.037 0.00 0.00 0.00 2.92
3874 4461 8.394971 TCTTTTTATGTGTGTGTGAAGATGAT 57.605 30.769 0.00 0.00 0.00 2.45
3875 4462 8.849168 TCTTTTTATGTGTGTGTGAAGATGATT 58.151 29.630 0.00 0.00 0.00 2.57
3881 4468 7.790823 TGTGTGTGTGAAGATGATTATATGG 57.209 36.000 0.00 0.00 0.00 2.74
3882 4469 6.260714 TGTGTGTGTGAAGATGATTATATGGC 59.739 38.462 0.00 0.00 0.00 4.40
3883 4470 6.484643 GTGTGTGTGAAGATGATTATATGGCT 59.515 38.462 0.00 0.00 0.00 4.75
3884 4471 7.657354 GTGTGTGTGAAGATGATTATATGGCTA 59.343 37.037 0.00 0.00 0.00 3.93
3885 4472 8.377799 TGTGTGTGAAGATGATTATATGGCTAT 58.622 33.333 0.00 0.00 0.00 2.97
3886 4473 8.663025 GTGTGTGAAGATGATTATATGGCTATG 58.337 37.037 0.00 0.00 0.00 2.23
3887 4474 8.596293 TGTGTGAAGATGATTATATGGCTATGA 58.404 33.333 0.00 0.00 0.00 2.15
3888 4475 9.096160 GTGTGAAGATGATTATATGGCTATGAG 57.904 37.037 0.00 0.00 0.00 2.90
3889 4476 7.767659 TGTGAAGATGATTATATGGCTATGAGC 59.232 37.037 0.00 0.00 41.46 4.26
3890 4477 6.982724 TGAAGATGATTATATGGCTATGAGCG 59.017 38.462 0.00 0.00 43.62 5.03
3891 4478 6.477053 AGATGATTATATGGCTATGAGCGT 57.523 37.500 0.00 0.00 43.62 5.07
3892 4479 6.511416 AGATGATTATATGGCTATGAGCGTC 58.489 40.000 0.00 0.00 43.62 5.19
3893 4480 5.659440 TGATTATATGGCTATGAGCGTCA 57.341 39.130 0.00 0.00 43.62 4.35
3894 4481 5.410924 TGATTATATGGCTATGAGCGTCAC 58.589 41.667 0.00 0.00 43.62 3.67
3895 4482 2.751166 ATATGGCTATGAGCGTCACC 57.249 50.000 0.00 0.00 43.62 4.02
3896 4483 0.313987 TATGGCTATGAGCGTCACCG 59.686 55.000 0.00 0.00 43.62 4.94
3897 4484 2.279517 GGCTATGAGCGTCACCGG 60.280 66.667 0.00 0.00 43.62 5.28
3898 4485 2.782222 GGCTATGAGCGTCACCGGA 61.782 63.158 9.46 0.00 43.62 5.14
3899 4486 1.299468 GCTATGAGCGTCACCGGAG 60.299 63.158 9.46 0.00 33.68 4.63
3900 4487 1.299468 CTATGAGCGTCACCGGAGC 60.299 63.158 9.46 8.26 33.68 4.70
3901 4488 2.004808 CTATGAGCGTCACCGGAGCA 62.005 60.000 9.46 0.00 33.68 4.26
3902 4489 2.004808 TATGAGCGTCACCGGAGCAG 62.005 60.000 9.46 0.00 33.68 4.24
3903 4490 3.749064 GAGCGTCACCGGAGCAGA 61.749 66.667 9.46 0.00 33.68 4.26
3904 4491 3.691744 GAGCGTCACCGGAGCAGAG 62.692 68.421 9.46 0.00 33.68 3.35
3906 4493 3.753434 CGTCACCGGAGCAGAGCT 61.753 66.667 9.46 0.00 43.88 4.09
3907 4494 2.407428 CGTCACCGGAGCAGAGCTA 61.407 63.158 9.46 0.00 39.88 3.32
3908 4495 1.435515 GTCACCGGAGCAGAGCTAG 59.564 63.158 9.46 0.00 39.88 3.42
3925 4512 5.659079 AGAGCTAGCTACTACCAAACTGAAT 59.341 40.000 19.38 0.00 0.00 2.57
3926 4513 5.665459 AGCTAGCTACTACCAAACTGAATG 58.335 41.667 17.69 0.00 0.00 2.67
3927 4514 5.422331 AGCTAGCTACTACCAAACTGAATGA 59.578 40.000 17.69 0.00 0.00 2.57
3928 4515 6.070767 AGCTAGCTACTACCAAACTGAATGAA 60.071 38.462 17.69 0.00 0.00 2.57
3931 4518 9.167311 CTAGCTACTACCAAACTGAATGAAAAT 57.833 33.333 0.00 0.00 0.00 1.82
3939 4526 6.207417 ACCAAACTGAATGAAAATCGATCACT 59.793 34.615 0.00 0.00 0.00 3.41
3942 4529 9.055248 CAAACTGAATGAAAATCGATCACTAAC 57.945 33.333 0.00 0.00 0.00 2.34
3949 4536 8.777865 ATGAAAATCGATCACTAACTGAGAAA 57.222 30.769 0.00 0.00 30.20 2.52
3951 4538 8.088365 TGAAAATCGATCACTAACTGAGAAAGA 58.912 33.333 0.00 0.00 30.20 2.52
3983 4570 2.223641 TGCTAGTAATACAAGTCCGGCG 60.224 50.000 0.00 0.00 0.00 6.46
3997 4592 2.742372 GGCGAGCGAGCAAGGAAA 60.742 61.111 8.59 0.00 39.27 3.13
4009 4604 1.476833 GCAAGGAAACAGGACTCACCA 60.477 52.381 0.00 0.00 42.04 4.17
4023 4618 0.966179 TCACCAACGAAGCAGCTAGA 59.034 50.000 0.00 0.00 0.00 2.43
4066 4665 1.817357 CTCCTGCAGCTTCATCAACA 58.183 50.000 8.66 0.00 0.00 3.33
4067 4666 2.156917 CTCCTGCAGCTTCATCAACAA 58.843 47.619 8.66 0.00 0.00 2.83
4074 4673 2.880268 CAGCTTCATCAACAACCAGTCA 59.120 45.455 0.00 0.00 0.00 3.41
4093 4692 1.067354 CAAAGCCAGGGAGAAATGCAC 60.067 52.381 0.00 0.00 0.00 4.57
4096 4695 1.299648 CCAGGGAGAAATGCACGGA 59.700 57.895 0.00 0.00 0.00 4.69
4102 4701 2.151202 GGAGAAATGCACGGACAAGAA 58.849 47.619 0.00 0.00 0.00 2.52
4104 4703 2.154462 AGAAATGCACGGACAAGAAGG 58.846 47.619 0.00 0.00 0.00 3.46
4115 4714 3.097614 GGACAAGAAGGGCTAGAGTGTA 58.902 50.000 0.00 0.00 0.00 2.90
4116 4715 3.707102 GGACAAGAAGGGCTAGAGTGTAT 59.293 47.826 0.00 0.00 0.00 2.29
4117 4716 4.894114 GGACAAGAAGGGCTAGAGTGTATA 59.106 45.833 0.00 0.00 0.00 1.47
4118 4717 5.010213 GGACAAGAAGGGCTAGAGTGTATAG 59.990 48.000 0.00 0.00 0.00 1.31
4119 4718 4.342665 ACAAGAAGGGCTAGAGTGTATAGC 59.657 45.833 0.00 0.00 44.02 2.97
4120 4719 4.186077 AGAAGGGCTAGAGTGTATAGCA 57.814 45.455 7.23 0.00 46.07 3.49
4121 4720 4.148838 AGAAGGGCTAGAGTGTATAGCAG 58.851 47.826 7.23 0.00 46.07 4.24
4122 4721 2.883026 AGGGCTAGAGTGTATAGCAGG 58.117 52.381 7.23 0.00 46.07 4.85
4123 4722 1.896465 GGGCTAGAGTGTATAGCAGGG 59.104 57.143 7.23 0.00 46.07 4.45
4124 4723 1.896465 GGCTAGAGTGTATAGCAGGGG 59.104 57.143 7.23 0.00 46.07 4.79
4125 4724 2.491086 GGCTAGAGTGTATAGCAGGGGA 60.491 54.545 7.23 0.00 46.07 4.81
4144 4743 3.264450 GGGAAGAGGAAGAAGATTGTCCA 59.736 47.826 0.00 0.00 33.57 4.02
4200 4799 2.571212 CTATTTATGGAGGCCACGCAA 58.429 47.619 5.01 0.00 35.80 4.85
4229 4828 3.770040 CACACGGCAGGGATCGGA 61.770 66.667 0.00 0.00 0.00 4.55
4299 4901 4.773117 GACGACGACGGCTCCACC 62.773 72.222 12.58 0.00 45.04 4.61
4305 4907 0.536460 ACGACGGCTCCACCAAATTT 60.536 50.000 0.00 0.00 39.03 1.82
4306 4908 0.168128 CGACGGCTCCACCAAATTTC 59.832 55.000 0.00 0.00 39.03 2.17
4307 4909 0.526211 GACGGCTCCACCAAATTTCC 59.474 55.000 0.00 0.00 39.03 3.13
4308 4910 1.241315 ACGGCTCCACCAAATTTCCG 61.241 55.000 9.85 9.85 39.03 4.30
4309 4911 1.890174 GGCTCCACCAAATTTCCGG 59.110 57.895 0.00 0.00 38.86 5.14
4336 4938 0.618458 AGGCCAGGCAATTAACTCGA 59.382 50.000 15.19 0.00 0.00 4.04
4337 4939 0.733150 GGCCAGGCAATTAACTCGAC 59.267 55.000 15.19 0.00 0.00 4.20
4338 4940 1.679032 GGCCAGGCAATTAACTCGACT 60.679 52.381 15.19 0.00 0.00 4.18
4339 4941 1.666189 GCCAGGCAATTAACTCGACTC 59.334 52.381 6.55 0.00 0.00 3.36
4387 4992 3.349006 CACACCGTGTGCTCTGGC 61.349 66.667 18.38 0.00 41.89 4.85
4421 5040 0.978907 TGTCATGGCTCTCTCTGCAA 59.021 50.000 0.00 0.00 0.00 4.08
4512 5131 3.165875 TCACACCTTCTGGACTTCCTAG 58.834 50.000 0.00 0.00 36.82 3.02
4513 5132 2.900546 CACACCTTCTGGACTTCCTAGT 59.099 50.000 0.00 0.00 37.31 2.57
4514 5133 2.900546 ACACCTTCTGGACTTCCTAGTG 59.099 50.000 0.00 0.00 33.84 2.74
4515 5134 3.165875 CACCTTCTGGACTTCCTAGTGA 58.834 50.000 0.00 0.00 33.84 3.41
4516 5135 3.578716 CACCTTCTGGACTTCCTAGTGAA 59.421 47.826 0.00 0.00 33.84 3.18
4517 5136 3.835395 ACCTTCTGGACTTCCTAGTGAAG 59.165 47.826 15.43 15.43 45.23 3.02
4609 5229 4.813296 TTTCTTTCTTTGAGAAGTCGCC 57.187 40.909 0.00 0.00 35.37 5.54
4631 5251 2.654912 CGATAAATCGTCCGGCCGC 61.655 63.158 22.85 6.08 44.74 6.53
4632 5252 1.300697 GATAAATCGTCCGGCCGCT 60.301 57.895 22.85 0.00 0.00 5.52
4634 5254 0.463116 ATAAATCGTCCGGCCGCTTT 60.463 50.000 22.85 11.63 31.88 3.51
4645 5265 1.424240 GCCGCTTTCGTTTAGAGCC 59.576 57.895 0.00 0.00 32.90 4.70
4679 5299 3.340789 GGACGTGCCCAAACAGAC 58.659 61.111 0.00 0.00 0.00 3.51
4738 5359 7.254863 CCCAACTCCAAATCTGAAACAAATTTG 60.255 37.037 16.67 16.67 39.16 2.32
4746 5367 3.198635 TCTGAAACAAATTTGGGCCACAA 59.801 39.130 21.74 4.48 37.28 3.33
4779 5400 4.832823 TGAGGACATAAACAGACACTCTCA 59.167 41.667 0.00 0.00 0.00 3.27
4789 5410 1.342819 AGACACTCTCACTGGTTGCTC 59.657 52.381 0.00 0.00 0.00 4.26
4797 5418 0.249868 CACTGGTTGCTCTTGTCCGA 60.250 55.000 0.00 0.00 0.00 4.55
4804 5425 1.153745 GCTCTTGTCCGATGCGTCT 60.154 57.895 4.05 0.00 0.00 4.18
4806 5427 0.109086 CTCTTGTCCGATGCGTCTGT 60.109 55.000 4.05 0.00 0.00 3.41
4811 5432 2.434884 CCGATGCGTCTGTTGGCT 60.435 61.111 4.05 0.00 0.00 4.75
4814 5435 3.044059 GATGCGTCTGTTGGCTGGC 62.044 63.158 0.00 0.00 0.00 4.85
4824 5445 0.899717 GTTGGCTGGCCCAGAAATCA 60.900 55.000 16.85 3.65 46.39 2.57
4831 5452 0.329596 GGCCCAGAAATCAGTGACCT 59.670 55.000 0.00 0.00 0.00 3.85
4843 5465 1.305718 GTGACCTCTCTGCCTCCCT 60.306 63.158 0.00 0.00 0.00 4.20
4847 5469 2.433994 CCTCTCTGCCTCCCTGCTC 61.434 68.421 0.00 0.00 0.00 4.26
4848 5470 1.381599 CTCTCTGCCTCCCTGCTCT 60.382 63.158 0.00 0.00 0.00 4.09
4849 5471 1.678598 CTCTCTGCCTCCCTGCTCTG 61.679 65.000 0.00 0.00 0.00 3.35
4850 5472 3.388703 CTCTGCCTCCCTGCTCTGC 62.389 68.421 0.00 0.00 0.00 4.26
4851 5473 3.400928 CTGCCTCCCTGCTCTGCT 61.401 66.667 0.00 0.00 0.00 4.24
4852 5474 2.039462 TGCCTCCCTGCTCTGCTA 59.961 61.111 0.00 0.00 0.00 3.49
4853 5475 2.308968 CTGCCTCCCTGCTCTGCTAC 62.309 65.000 0.00 0.00 0.00 3.58
4854 5476 3.100503 GCCTCCCTGCTCTGCTACC 62.101 68.421 0.00 0.00 0.00 3.18
4855 5477 2.439104 CCTCCCTGCTCTGCTACCC 61.439 68.421 0.00 0.00 0.00 3.69
4856 5478 2.365635 TCCCTGCTCTGCTACCCC 60.366 66.667 0.00 0.00 0.00 4.95
4857 5479 3.854669 CCCTGCTCTGCTACCCCG 61.855 72.222 0.00 0.00 0.00 5.73
4858 5480 4.537433 CCTGCTCTGCTACCCCGC 62.537 72.222 0.00 0.00 0.00 6.13
4859 5481 3.465403 CTGCTCTGCTACCCCGCT 61.465 66.667 0.00 0.00 0.00 5.52
4860 5482 3.729965 CTGCTCTGCTACCCCGCTG 62.730 68.421 0.00 0.00 0.00 5.18
4861 5483 4.537433 GCTCTGCTACCCCGCTGG 62.537 72.222 0.00 0.00 41.37 4.85
4862 5484 2.759973 CTCTGCTACCCCGCTGGA 60.760 66.667 0.00 0.00 38.00 3.86
4863 5485 3.075005 TCTGCTACCCCGCTGGAC 61.075 66.667 0.00 0.00 38.00 4.02
4864 5486 4.514577 CTGCTACCCCGCTGGACG 62.515 72.222 0.00 0.00 43.15 4.79
4867 5489 4.208686 CTACCCCGCTGGACGCTC 62.209 72.222 0.00 0.00 41.76 5.03
4904 5526 4.025401 GCCGTTGGTGCACCGAAG 62.025 66.667 27.82 27.40 39.43 3.79
4905 5527 2.590575 CCGTTGGTGCACCGAAGT 60.591 61.111 29.99 0.00 39.43 3.01
4906 5528 2.604174 CCGTTGGTGCACCGAAGTC 61.604 63.158 29.99 17.55 39.43 3.01
4907 5529 1.594293 CGTTGGTGCACCGAAGTCT 60.594 57.895 27.82 0.00 39.43 3.24
4908 5530 1.557443 CGTTGGTGCACCGAAGTCTC 61.557 60.000 27.82 13.58 39.43 3.36
4909 5531 1.300620 TTGGTGCACCGAAGTCTCG 60.301 57.895 30.07 0.00 45.02 4.04
4910 5532 3.112709 GGTGCACCGAAGTCTCGC 61.113 66.667 22.49 0.00 44.04 5.03
4911 5533 2.049063 GTGCACCGAAGTCTCGCT 60.049 61.111 5.22 0.00 44.04 4.93
4912 5534 2.089349 GTGCACCGAAGTCTCGCTC 61.089 63.158 5.22 0.00 44.04 5.03
4913 5535 2.507324 GCACCGAAGTCTCGCTCC 60.507 66.667 0.00 0.00 44.04 4.70
4914 5536 2.182030 CACCGAAGTCTCGCTCCC 59.818 66.667 0.00 0.00 44.04 4.30
4915 5537 2.035940 ACCGAAGTCTCGCTCCCT 59.964 61.111 0.00 0.00 44.04 4.20
4916 5538 2.344203 ACCGAAGTCTCGCTCCCTG 61.344 63.158 0.00 0.00 44.04 4.45
4917 5539 2.202676 CGAAGTCTCGCTCCCTGC 60.203 66.667 0.00 0.00 38.45 4.85
4918 5540 2.185608 GAAGTCTCGCTCCCTGCC 59.814 66.667 0.00 0.00 38.78 4.85
4919 5541 2.604686 AAGTCTCGCTCCCTGCCA 60.605 61.111 0.00 0.00 38.78 4.92
4920 5542 2.844072 GAAGTCTCGCTCCCTGCCAC 62.844 65.000 0.00 0.00 38.78 5.01
4921 5543 4.459089 GTCTCGCTCCCTGCCACC 62.459 72.222 0.00 0.00 38.78 4.61
4937 5559 3.127533 CCGCAGGCACTAGCAACC 61.128 66.667 0.00 0.00 46.14 3.77
4938 5560 3.490759 CGCAGGCACTAGCAACCG 61.491 66.667 0.00 0.00 44.61 4.44
4939 5561 3.127533 GCAGGCACTAGCAACCGG 61.128 66.667 0.00 0.00 44.61 5.28
4940 5562 2.662596 CAGGCACTAGCAACCGGA 59.337 61.111 9.46 0.00 44.61 5.14
4941 5563 1.448540 CAGGCACTAGCAACCGGAG 60.449 63.158 9.46 0.15 44.61 4.63
4942 5564 2.820037 GGCACTAGCAACCGGAGC 60.820 66.667 9.46 12.61 44.61 4.70
4943 5565 2.047274 GCACTAGCAACCGGAGCA 60.047 61.111 21.98 9.86 41.58 4.26
4944 5566 2.103042 GCACTAGCAACCGGAGCAG 61.103 63.158 21.98 18.24 41.58 4.24
4945 5567 2.103042 CACTAGCAACCGGAGCAGC 61.103 63.158 21.98 13.58 0.00 5.25
4946 5568 2.265739 CTAGCAACCGGAGCAGCA 59.734 61.111 21.98 8.73 0.00 4.41
4947 5569 2.047274 TAGCAACCGGAGCAGCAC 60.047 61.111 21.98 0.00 0.00 4.40
4948 5570 3.932580 TAGCAACCGGAGCAGCACG 62.933 63.158 21.98 0.00 0.00 5.34
4964 5586 4.692129 CGCTGTCGTCGCTCTATT 57.308 55.556 0.00 0.00 0.00 1.73
4965 5587 2.485933 CGCTGTCGTCGCTCTATTC 58.514 57.895 0.00 0.00 0.00 1.75
4966 5588 0.930742 CGCTGTCGTCGCTCTATTCC 60.931 60.000 0.00 0.00 0.00 3.01
4967 5589 0.382515 GCTGTCGTCGCTCTATTCCT 59.617 55.000 0.00 0.00 0.00 3.36
4968 5590 1.202313 GCTGTCGTCGCTCTATTCCTT 60.202 52.381 0.00 0.00 0.00 3.36
4969 5591 2.455032 CTGTCGTCGCTCTATTCCTTG 58.545 52.381 0.00 0.00 0.00 3.61
4970 5592 1.134367 TGTCGTCGCTCTATTCCTTGG 59.866 52.381 0.00 0.00 0.00 3.61
4971 5593 0.744874 TCGTCGCTCTATTCCTTGGG 59.255 55.000 0.00 0.00 0.00 4.12
4972 5594 0.876342 CGTCGCTCTATTCCTTGGGC 60.876 60.000 0.00 0.00 0.00 5.36
4973 5595 0.466124 GTCGCTCTATTCCTTGGGCT 59.534 55.000 0.00 0.00 0.00 5.19
4974 5596 0.753262 TCGCTCTATTCCTTGGGCTC 59.247 55.000 0.00 0.00 0.00 4.70
4975 5597 0.250081 CGCTCTATTCCTTGGGCTCC 60.250 60.000 0.00 0.00 0.00 4.70
4976 5598 0.109532 GCTCTATTCCTTGGGCTCCC 59.890 60.000 0.00 0.00 0.00 4.30
4977 5599 0.767998 CTCTATTCCTTGGGCTCCCC 59.232 60.000 1.89 0.00 45.71 4.81
4988 5610 2.849646 GCTCCCCGCCCCTCTATT 60.850 66.667 0.00 0.00 0.00 1.73
4989 5611 2.884980 GCTCCCCGCCCCTCTATTC 61.885 68.421 0.00 0.00 0.00 1.75
4990 5612 1.152226 CTCCCCGCCCCTCTATTCT 60.152 63.158 0.00 0.00 0.00 2.40
4991 5613 0.114560 CTCCCCGCCCCTCTATTCTA 59.885 60.000 0.00 0.00 0.00 2.10
4992 5614 0.114560 TCCCCGCCCCTCTATTCTAG 59.885 60.000 0.00 0.00 0.00 2.43
4993 5615 0.178929 CCCCGCCCCTCTATTCTAGT 60.179 60.000 0.00 0.00 0.00 2.57
4994 5616 0.969894 CCCGCCCCTCTATTCTAGTG 59.030 60.000 0.00 0.00 0.00 2.74
4995 5617 1.480683 CCCGCCCCTCTATTCTAGTGA 60.481 57.143 0.00 0.00 0.00 3.41
4996 5618 2.317040 CCGCCCCTCTATTCTAGTGAA 58.683 52.381 0.00 0.00 36.54 3.18
4997 5619 2.036089 CCGCCCCTCTATTCTAGTGAAC 59.964 54.545 0.00 0.00 34.71 3.18
4998 5620 2.693591 CGCCCCTCTATTCTAGTGAACA 59.306 50.000 0.00 0.00 34.71 3.18
4999 5621 3.243569 CGCCCCTCTATTCTAGTGAACAG 60.244 52.174 0.00 0.00 34.71 3.16
5000 5622 3.070302 GCCCCTCTATTCTAGTGAACAGG 59.930 52.174 0.00 0.00 34.71 4.00
5001 5623 3.643792 CCCCTCTATTCTAGTGAACAGGG 59.356 52.174 10.30 10.30 41.84 4.45
5002 5624 4.547671 CCCTCTATTCTAGTGAACAGGGA 58.452 47.826 11.34 0.00 43.28 4.20
5003 5625 4.342665 CCCTCTATTCTAGTGAACAGGGAC 59.657 50.000 11.34 0.00 43.28 4.46
5004 5626 4.956700 CCTCTATTCTAGTGAACAGGGACA 59.043 45.833 0.00 0.00 28.93 4.02
5005 5627 5.068460 CCTCTATTCTAGTGAACAGGGACAG 59.932 48.000 0.00 0.00 28.93 3.51
5006 5628 4.956700 TCTATTCTAGTGAACAGGGACAGG 59.043 45.833 0.00 0.00 34.71 4.00
5007 5629 1.938585 TCTAGTGAACAGGGACAGGG 58.061 55.000 0.00 0.00 0.00 4.45
5008 5630 1.431633 TCTAGTGAACAGGGACAGGGA 59.568 52.381 0.00 0.00 0.00 4.20
5009 5631 1.550976 CTAGTGAACAGGGACAGGGAC 59.449 57.143 0.00 0.00 0.00 4.46
5010 5632 0.104934 AGTGAACAGGGACAGGGACT 60.105 55.000 0.00 0.00 43.88 3.85
5011 5633 0.321996 GTGAACAGGGACAGGGACTC 59.678 60.000 0.00 0.00 34.60 3.36
5012 5634 0.836400 TGAACAGGGACAGGGACTCC 60.836 60.000 0.00 0.00 34.60 3.85
5013 5635 0.836400 GAACAGGGACAGGGACTCCA 60.836 60.000 0.00 0.00 34.60 3.86
5014 5636 1.128188 AACAGGGACAGGGACTCCAC 61.128 60.000 0.00 0.00 34.60 4.02
5015 5637 2.122954 AGGGACAGGGACTCCACC 59.877 66.667 0.00 0.00 34.60 4.61
5016 5638 2.122954 GGGACAGGGACTCCACCT 59.877 66.667 0.00 0.00 34.60 4.00
5017 5639 1.990614 GGGACAGGGACTCCACCTC 60.991 68.421 0.00 0.00 34.60 3.85
5018 5640 2.352032 GGACAGGGACTCCACCTCG 61.352 68.421 0.00 0.00 34.60 4.63
5019 5641 1.304217 GACAGGGACTCCACCTCGA 60.304 63.158 0.00 0.00 34.60 4.04
5020 5642 1.596895 GACAGGGACTCCACCTCGAC 61.597 65.000 0.00 0.00 34.60 4.20
5021 5643 2.361357 AGGGACTCCACCTCGACG 60.361 66.667 0.00 0.00 31.01 5.12
5022 5644 2.675772 GGGACTCCACCTCGACGT 60.676 66.667 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.665603 GGACCTCGCTTTCTGCCT 59.334 61.111 0.00 0.00 38.78 4.75
8 9 2.436824 GGGACCTCGCTTTCTGCC 60.437 66.667 0.00 0.00 38.78 4.85
27 28 3.499737 CCCGCGCTAGGCAACAAG 61.500 66.667 5.56 0.00 43.84 3.16
41 42 2.028190 ATCTTGATCGCTCGCCCG 59.972 61.111 0.00 0.00 0.00 6.13
42 43 0.811616 AACATCTTGATCGCTCGCCC 60.812 55.000 0.00 0.00 0.00 6.13
43 44 0.579156 GAACATCTTGATCGCTCGCC 59.421 55.000 0.00 0.00 0.00 5.54
50 53 5.355350 CCTACCAAGGTTGAACATCTTGATC 59.645 44.000 13.54 0.00 39.97 2.92
57 60 1.613255 CGGCCTACCAAGGTTGAACAT 60.613 52.381 0.00 0.00 45.64 2.71
110 117 1.456705 GGTTTCACACAGGGGCCAA 60.457 57.895 4.39 0.00 0.00 4.52
157 164 1.741706 CATGTGCTAGTTTCCTGCTGG 59.258 52.381 2.58 2.58 0.00 4.85
162 169 1.270839 ACGTGCATGTGCTAGTTTCCT 60.271 47.619 11.65 0.00 42.66 3.36
167 174 2.094659 GCGACGTGCATGTGCTAGT 61.095 57.895 18.17 6.14 45.45 2.57
247 258 3.433882 TTTGATGACAAGTACCGGTTGGT 60.434 43.478 15.04 6.07 43.56 3.67
275 286 1.726248 TCGACTTGTGATGCGATGTTG 59.274 47.619 0.00 0.00 0.00 3.33
284 295 2.483876 CACACTTGGTCGACTTGTGAT 58.516 47.619 28.34 16.90 40.02 3.06
308 321 0.687354 AGCTTCCTTCCTCGCTTCAA 59.313 50.000 0.00 0.00 0.00 2.69
315 328 2.273776 GGGGCAGCTTCCTTCCTC 59.726 66.667 1.39 0.00 0.00 3.71
330 352 2.105477 ACAAGAATCTGGATGGATCGGG 59.895 50.000 0.00 0.00 0.00 5.14
384 412 1.069568 AGATGAGACGATCGATCACGC 60.070 52.381 24.34 18.14 39.58 5.34
418 446 5.429681 TTCCGATGATCTCCCTAACAAAA 57.570 39.130 0.00 0.00 0.00 2.44
422 450 4.674281 AGTTTCCGATGATCTCCCTAAC 57.326 45.455 0.00 0.00 0.00 2.34
461 492 0.036294 GGCTGGAAAAGGTAGCGTCT 60.036 55.000 0.00 0.00 38.31 4.18
463 494 1.002502 GGGCTGGAAAAGGTAGCGT 60.003 57.895 0.00 0.00 38.31 5.07
495 530 3.377485 CCGTGACATGTACTACTAGCAGT 59.623 47.826 0.00 0.31 0.00 4.40
498 533 2.358267 AGCCGTGACATGTACTACTAGC 59.642 50.000 0.00 4.97 0.00 3.42
499 534 3.626217 TCAGCCGTGACATGTACTACTAG 59.374 47.826 0.00 0.00 0.00 2.57
500 535 3.613030 TCAGCCGTGACATGTACTACTA 58.387 45.455 0.00 0.00 0.00 1.82
502 537 2.933495 TCAGCCGTGACATGTACTAC 57.067 50.000 0.00 0.00 0.00 2.73
519 718 4.777896 AGGTAGCCAGTCTTACTTTCATCA 59.222 41.667 0.00 0.00 0.00 3.07
527 726 8.507524 AATAAATTTCAGGTAGCCAGTCTTAC 57.492 34.615 0.00 0.00 0.00 2.34
529 728 8.306761 CAAAATAAATTTCAGGTAGCCAGTCTT 58.693 33.333 0.00 0.00 0.00 3.01
530 729 7.093771 CCAAAATAAATTTCAGGTAGCCAGTCT 60.094 37.037 0.00 0.00 0.00 3.24
531 730 7.035612 CCAAAATAAATTTCAGGTAGCCAGTC 58.964 38.462 0.00 0.00 0.00 3.51
532 731 6.070824 CCCAAAATAAATTTCAGGTAGCCAGT 60.071 38.462 0.00 0.00 0.00 4.00
533 732 6.070824 ACCCAAAATAAATTTCAGGTAGCCAG 60.071 38.462 0.00 0.00 34.93 4.85
535 734 6.294361 ACCCAAAATAAATTTCAGGTAGCC 57.706 37.500 0.00 0.00 34.93 3.93
536 735 8.528643 ACTTACCCAAAATAAATTTCAGGTAGC 58.471 33.333 0.00 0.00 37.98 3.58
539 738 7.449086 TCGACTTACCCAAAATAAATTTCAGGT 59.551 33.333 11.77 11.77 38.15 4.00
540 739 7.822658 TCGACTTACCCAAAATAAATTTCAGG 58.177 34.615 0.00 3.38 0.00 3.86
541 740 9.855021 AATCGACTTACCCAAAATAAATTTCAG 57.145 29.630 0.00 0.00 0.00 3.02
545 744 9.647797 GGAAAATCGACTTACCCAAAATAAATT 57.352 29.630 0.00 0.00 0.00 1.82
546 745 9.031537 AGGAAAATCGACTTACCCAAAATAAAT 57.968 29.630 0.00 0.00 0.00 1.40
550 749 6.095021 GCTAGGAAAATCGACTTACCCAAAAT 59.905 38.462 0.00 0.00 0.00 1.82
551 750 5.413523 GCTAGGAAAATCGACTTACCCAAAA 59.586 40.000 0.00 0.00 0.00 2.44
552 751 4.939439 GCTAGGAAAATCGACTTACCCAAA 59.061 41.667 0.00 0.00 0.00 3.28
553 752 4.510571 GCTAGGAAAATCGACTTACCCAA 58.489 43.478 0.00 0.00 0.00 4.12
554 753 3.118519 GGCTAGGAAAATCGACTTACCCA 60.119 47.826 0.00 0.00 0.00 4.51
555 754 3.118519 TGGCTAGGAAAATCGACTTACCC 60.119 47.826 0.00 0.00 0.00 3.69
556 755 4.133013 TGGCTAGGAAAATCGACTTACC 57.867 45.455 0.00 0.00 0.00 2.85
557 756 5.007724 CCAATGGCTAGGAAAATCGACTTAC 59.992 44.000 0.00 0.00 0.00 2.34
558 757 5.123227 CCAATGGCTAGGAAAATCGACTTA 58.877 41.667 0.00 0.00 0.00 2.24
561 760 2.618709 CCCAATGGCTAGGAAAATCGAC 59.381 50.000 0.00 0.00 0.00 4.20
562 761 2.241176 ACCCAATGGCTAGGAAAATCGA 59.759 45.455 0.00 0.00 33.59 3.59
563 762 2.654863 ACCCAATGGCTAGGAAAATCG 58.345 47.619 0.00 0.00 33.59 3.34
564 763 5.891551 TCTTAACCCAATGGCTAGGAAAATC 59.108 40.000 0.00 0.00 33.59 2.17
565 764 5.837829 TCTTAACCCAATGGCTAGGAAAAT 58.162 37.500 0.00 0.00 33.59 1.82
568 767 4.141251 GGATCTTAACCCAATGGCTAGGAA 60.141 45.833 0.00 0.00 33.59 3.36
569 768 3.394606 GGATCTTAACCCAATGGCTAGGA 59.605 47.826 0.00 0.00 33.59 2.94
570 769 3.138283 TGGATCTTAACCCAATGGCTAGG 59.862 47.826 0.00 0.00 33.59 3.02
572 771 4.871871 TTGGATCTTAACCCAATGGCTA 57.128 40.909 0.00 0.00 37.50 3.93
573 772 3.756082 TTGGATCTTAACCCAATGGCT 57.244 42.857 0.00 0.00 37.50 4.75
578 777 2.625617 GGGCCATTGGATCTTAACCCAA 60.626 50.000 6.95 0.00 45.40 4.12
580 779 1.217942 AGGGCCATTGGATCTTAACCC 59.782 52.381 6.18 5.52 36.29 4.11
581 780 2.587522 GAGGGCCATTGGATCTTAACC 58.412 52.381 6.18 0.00 0.00 2.85
582 781 2.175715 AGGAGGGCCATTGGATCTTAAC 59.824 50.000 6.18 0.00 36.29 2.01
583 782 2.502745 AGGAGGGCCATTGGATCTTAA 58.497 47.619 6.18 0.00 36.29 1.85
585 784 1.312884 AAGGAGGGCCATTGGATCTT 58.687 50.000 6.18 0.00 36.29 2.40
587 786 1.216427 AGAAAGGAGGGCCATTGGATC 59.784 52.381 6.18 0.63 36.29 3.36
588 787 1.216427 GAGAAAGGAGGGCCATTGGAT 59.784 52.381 6.18 0.00 36.29 3.41
591 790 2.373224 GAAGAGAAAGGAGGGCCATTG 58.627 52.381 6.18 0.00 36.29 2.82
592 791 1.286257 GGAAGAGAAAGGAGGGCCATT 59.714 52.381 6.18 0.00 36.29 3.16
593 792 0.922626 GGAAGAGAAAGGAGGGCCAT 59.077 55.000 6.18 0.00 36.29 4.40
594 793 0.178861 AGGAAGAGAAAGGAGGGCCA 60.179 55.000 6.18 0.00 36.29 5.36
595 794 0.544223 GAGGAAGAGAAAGGAGGGCC 59.456 60.000 0.00 0.00 0.00 5.80
596 795 0.544223 GGAGGAAGAGAAAGGAGGGC 59.456 60.000 0.00 0.00 0.00 5.19
597 796 1.557371 GTGGAGGAAGAGAAAGGAGGG 59.443 57.143 0.00 0.00 0.00 4.30
598 797 1.557371 GGTGGAGGAAGAGAAAGGAGG 59.443 57.143 0.00 0.00 0.00 4.30
599 798 1.205893 CGGTGGAGGAAGAGAAAGGAG 59.794 57.143 0.00 0.00 0.00 3.69
600 799 1.267121 CGGTGGAGGAAGAGAAAGGA 58.733 55.000 0.00 0.00 0.00 3.36
601 800 0.391793 GCGGTGGAGGAAGAGAAAGG 60.392 60.000 0.00 0.00 0.00 3.11
602 801 0.610687 AGCGGTGGAGGAAGAGAAAG 59.389 55.000 0.00 0.00 0.00 2.62
603 802 0.608640 GAGCGGTGGAGGAAGAGAAA 59.391 55.000 0.00 0.00 0.00 2.52
604 803 1.258445 GGAGCGGTGGAGGAAGAGAA 61.258 60.000 0.00 0.00 0.00 2.87
606 805 1.671901 GAGGAGCGGTGGAGGAAGAG 61.672 65.000 0.00 0.00 0.00 2.85
607 806 1.682684 GAGGAGCGGTGGAGGAAGA 60.683 63.158 0.00 0.00 0.00 2.87
608 807 1.671901 GAGAGGAGCGGTGGAGGAAG 61.672 65.000 0.00 0.00 0.00 3.46
609 808 1.682684 GAGAGGAGCGGTGGAGGAA 60.683 63.158 0.00 0.00 0.00 3.36
610 809 2.043852 GAGAGGAGCGGTGGAGGA 60.044 66.667 0.00 0.00 0.00 3.71
611 810 2.363018 TGAGAGGAGCGGTGGAGG 60.363 66.667 0.00 0.00 0.00 4.30
612 811 1.536073 TTGTGAGAGGAGCGGTGGAG 61.536 60.000 0.00 0.00 0.00 3.86
613 812 1.118965 TTTGTGAGAGGAGCGGTGGA 61.119 55.000 0.00 0.00 0.00 4.02
614 813 0.250295 TTTTGTGAGAGGAGCGGTGG 60.250 55.000 0.00 0.00 0.00 4.61
615 814 1.734465 GATTTTGTGAGAGGAGCGGTG 59.266 52.381 0.00 0.00 0.00 4.94
616 815 1.673033 CGATTTTGTGAGAGGAGCGGT 60.673 52.381 0.00 0.00 0.00 5.68
617 816 1.002366 CGATTTTGTGAGAGGAGCGG 58.998 55.000 0.00 0.00 0.00 5.52
640 839 9.801714 GTTGACTGAATTTGCAATTTGATTAAG 57.198 29.630 11.11 7.68 0.00 1.85
668 867 6.988580 ACACAGTAGCTACACACGAGTATATA 59.011 38.462 25.28 0.00 0.00 0.86
676 875 2.699251 TCACACAGTAGCTACACACG 57.301 50.000 25.28 12.79 0.00 4.49
677 876 5.924475 ATTTTCACACAGTAGCTACACAC 57.076 39.130 25.28 0.87 0.00 3.82
731 930 5.530243 AGCTCCTACTACCTACCTTGAAAT 58.470 41.667 0.00 0.00 0.00 2.17
746 945 7.148355 ACTAAATTCTATCGCTAGCTCCTAC 57.852 40.000 13.93 0.00 0.00 3.18
747 946 8.102047 AGTACTAAATTCTATCGCTAGCTCCTA 58.898 37.037 13.93 0.57 0.00 2.94
748 947 6.943718 AGTACTAAATTCTATCGCTAGCTCCT 59.056 38.462 13.93 0.00 0.00 3.69
749 948 7.024768 CAGTACTAAATTCTATCGCTAGCTCC 58.975 42.308 13.93 0.00 0.00 4.70
750 949 7.586747 ACAGTACTAAATTCTATCGCTAGCTC 58.413 38.462 13.93 0.00 0.00 4.09
751 950 7.513371 ACAGTACTAAATTCTATCGCTAGCT 57.487 36.000 13.93 0.00 0.00 3.32
800 1004 4.320421 GGAAAACTTTCATGCATTTTGGCC 60.320 41.667 0.00 0.00 38.92 5.36
869 1078 9.710818 AGTAATAGGGAGTGATACAAGTTAAGA 57.289 33.333 0.00 0.00 0.00 2.10
870 1079 9.751542 CAGTAATAGGGAGTGATACAAGTTAAG 57.248 37.037 0.00 0.00 0.00 1.85
872 1081 7.563924 AGCAGTAATAGGGAGTGATACAAGTTA 59.436 37.037 0.00 0.00 0.00 2.24
873 1082 6.384305 AGCAGTAATAGGGAGTGATACAAGTT 59.616 38.462 0.00 0.00 0.00 2.66
902 1117 2.672961 TCATTAGAGTTGCTGGTCGG 57.327 50.000 0.00 0.00 0.00 4.79
917 1132 5.411669 GTCGAGTTGTCCAGGTTAATTCATT 59.588 40.000 0.00 0.00 0.00 2.57
956 1171 4.730966 ACTCAGGAGTCAGAGTACAAGAA 58.269 43.478 13.88 0.00 42.92 2.52
957 1172 4.374689 ACTCAGGAGTCAGAGTACAAGA 57.625 45.455 13.88 0.00 42.92 3.02
959 1174 4.893524 TCAAACTCAGGAGTCAGAGTACAA 59.106 41.667 15.33 4.34 43.88 2.41
960 1175 4.470602 TCAAACTCAGGAGTCAGAGTACA 58.529 43.478 15.33 3.31 43.88 2.90
961 1176 5.224135 GTTCAAACTCAGGAGTCAGAGTAC 58.776 45.833 15.33 8.25 43.88 2.73
964 1179 3.312828 CGTTCAAACTCAGGAGTCAGAG 58.687 50.000 1.86 9.55 41.58 3.35
966 1181 1.795286 GCGTTCAAACTCAGGAGTCAG 59.205 52.381 1.86 0.00 41.58 3.51
967 1182 1.412710 AGCGTTCAAACTCAGGAGTCA 59.587 47.619 1.86 0.00 41.58 3.41
980 1213 4.520874 TCATTTTAATGGTTGGAGCGTTCA 59.479 37.500 0.53 0.00 37.03 3.18
981 1214 5.054390 TCATTTTAATGGTTGGAGCGTTC 57.946 39.130 2.85 0.00 37.03 3.95
983 1216 4.097892 GGATCATTTTAATGGTTGGAGCGT 59.902 41.667 0.00 0.00 37.03 5.07
984 1217 4.097741 TGGATCATTTTAATGGTTGGAGCG 59.902 41.667 0.00 0.00 37.03 5.03
985 1218 5.596836 TGGATCATTTTAATGGTTGGAGC 57.403 39.130 0.00 0.00 37.03 4.70
996 1230 8.859090 GTTTGGATGGATGTATGGATCATTTTA 58.141 33.333 0.00 0.00 0.00 1.52
1001 1235 4.416513 AGGTTTGGATGGATGTATGGATCA 59.583 41.667 0.00 0.00 0.00 2.92
1002 1236 4.763793 CAGGTTTGGATGGATGTATGGATC 59.236 45.833 0.00 0.00 0.00 3.36
1046 1298 2.048127 GCCCGTGTGAGACAGTCC 60.048 66.667 0.00 0.00 0.00 3.85
1048 1300 2.421739 GTGCCCGTGTGAGACAGT 59.578 61.111 0.00 0.00 0.00 3.55
1658 1914 1.204786 TTGATCCCCGAGGCCAAGAA 61.205 55.000 5.01 0.00 0.00 2.52
1676 1932 2.002586 CATCTTCACGGCGATCAACTT 58.997 47.619 16.62 0.00 0.00 2.66
1957 2252 0.755686 GGATGAAGATGCCCGAGACT 59.244 55.000 0.00 0.00 0.00 3.24
2069 2364 4.832608 GCCCGCCTACAAGGACGG 62.833 72.222 16.83 16.83 47.00 4.79
2679 2974 2.437281 GAGATCAATCAAGGAGGGCTCA 59.563 50.000 0.00 0.00 0.00 4.26
2729 3024 2.417339 TCTCTCAACAGGAACGAACG 57.583 50.000 0.00 0.00 0.00 3.95
2734 3029 5.398603 TCTCATCTTCTCTCAACAGGAAC 57.601 43.478 0.00 0.00 0.00 3.62
2736 3031 5.328565 TCTTCTCATCTTCTCTCAACAGGA 58.671 41.667 0.00 0.00 0.00 3.86
2737 3032 5.657826 TCTTCTCATCTTCTCTCAACAGG 57.342 43.478 0.00 0.00 0.00 4.00
2739 3034 6.212187 TCCAATCTTCTCATCTTCTCTCAACA 59.788 38.462 0.00 0.00 0.00 3.33
2740 3035 6.638610 TCCAATCTTCTCATCTTCTCTCAAC 58.361 40.000 0.00 0.00 0.00 3.18
2741 3036 6.666980 TCTCCAATCTTCTCATCTTCTCTCAA 59.333 38.462 0.00 0.00 0.00 3.02
2742 3037 6.193504 TCTCCAATCTTCTCATCTTCTCTCA 58.806 40.000 0.00 0.00 0.00 3.27
2743 3038 6.713762 TCTCCAATCTTCTCATCTTCTCTC 57.286 41.667 0.00 0.00 0.00 3.20
2744 3039 7.679732 AATCTCCAATCTTCTCATCTTCTCT 57.320 36.000 0.00 0.00 0.00 3.10
2745 3040 8.735692 AAAATCTCCAATCTTCTCATCTTCTC 57.264 34.615 0.00 0.00 0.00 2.87
2747 3042 9.054922 CCTAAAATCTCCAATCTTCTCATCTTC 57.945 37.037 0.00 0.00 0.00 2.87
2779 3074 1.231641 CCCTCCCTCCTCGTCTCAT 59.768 63.158 0.00 0.00 0.00 2.90
2782 3077 4.824515 CGCCCTCCCTCCTCGTCT 62.825 72.222 0.00 0.00 0.00 4.18
2800 3095 3.646637 ACTATTTATCTCCTCCAACCCGG 59.353 47.826 0.00 0.00 0.00 5.73
2806 3101 2.037251 GCCGCACTATTTATCTCCTCCA 59.963 50.000 0.00 0.00 0.00 3.86
2936 3283 0.107410 AACAACTGTCAGCCGGTTCA 60.107 50.000 1.90 0.00 40.79 3.18
2971 3318 1.121378 TACCACGCGAATATTCCCCA 58.879 50.000 15.93 0.00 0.00 4.96
2985 3332 8.674607 CAAAACTGGAATAGGATTACTTACCAC 58.325 37.037 0.00 0.00 0.00 4.16
2986 3333 8.387813 ACAAAACTGGAATAGGATTACTTACCA 58.612 33.333 0.00 0.00 0.00 3.25
2991 3338 6.152831 GCCAACAAAACTGGAATAGGATTACT 59.847 38.462 0.00 0.00 35.85 2.24
2994 3341 4.082245 CGCCAACAAAACTGGAATAGGATT 60.082 41.667 0.00 0.00 35.85 3.01
2998 3345 3.751175 TCTCGCCAACAAAACTGGAATAG 59.249 43.478 0.00 0.00 35.85 1.73
3085 3443 7.199167 TCTCATCTCATCTCACCCAAATAAA 57.801 36.000 0.00 0.00 0.00 1.40
3088 3446 5.908562 ATCTCATCTCATCTCACCCAAAT 57.091 39.130 0.00 0.00 0.00 2.32
3091 3449 5.184671 CGAATATCTCATCTCATCTCACCCA 59.815 44.000 0.00 0.00 0.00 4.51
3131 3493 2.469765 AACCCCACCCCCTCAACAG 61.470 63.158 0.00 0.00 0.00 3.16
3142 3505 2.364324 GTTTCCTCTTTTCCAACCCCAC 59.636 50.000 0.00 0.00 0.00 4.61
3143 3506 2.673258 GTTTCCTCTTTTCCAACCCCA 58.327 47.619 0.00 0.00 0.00 4.96
3203 3566 1.633945 ACTTGCCCCGTATTTCTTCCT 59.366 47.619 0.00 0.00 0.00 3.36
3204 3567 2.124277 ACTTGCCCCGTATTTCTTCC 57.876 50.000 0.00 0.00 0.00 3.46
3247 3610 1.029947 GCCGTGTAAACCCATCCAGG 61.030 60.000 0.00 0.00 37.03 4.45
3251 3614 1.467342 GTCAAGCCGTGTAAACCCATC 59.533 52.381 0.00 0.00 0.00 3.51
3252 3615 1.530323 GTCAAGCCGTGTAAACCCAT 58.470 50.000 0.00 0.00 0.00 4.00
3253 3616 0.881159 CGTCAAGCCGTGTAAACCCA 60.881 55.000 0.00 0.00 0.00 4.51
3254 3617 1.864176 CGTCAAGCCGTGTAAACCC 59.136 57.895 0.00 0.00 0.00 4.11
3255 3618 1.205820 GCGTCAAGCCGTGTAAACC 59.794 57.895 0.00 0.00 40.81 3.27
3256 3619 4.812308 GCGTCAAGCCGTGTAAAC 57.188 55.556 0.00 0.00 40.81 2.01
3266 3629 1.416813 GATGGAGTGCGAGCGTCAAG 61.417 60.000 0.00 0.00 0.00 3.02
3267 3630 1.446099 GATGGAGTGCGAGCGTCAA 60.446 57.895 0.00 0.00 0.00 3.18
3272 3635 2.587194 ATGCGATGGAGTGCGAGC 60.587 61.111 0.00 0.00 0.00 5.03
3273 3636 2.879070 GCATGCGATGGAGTGCGAG 61.879 63.158 0.00 0.00 0.00 5.03
3274 3637 2.891936 GCATGCGATGGAGTGCGA 60.892 61.111 0.00 0.00 0.00 5.10
3275 3638 2.540228 ATGCATGCGATGGAGTGCG 61.540 57.895 14.09 0.00 40.34 5.34
3276 3639 1.008881 CATGCATGCGATGGAGTGC 60.009 57.895 14.93 0.00 38.05 4.40
3279 3642 1.228033 TCCCATGCATGCGATGGAG 60.228 57.895 32.95 25.80 42.81 3.86
3281 3644 1.228033 TCTCCCATGCATGCGATGG 60.228 57.895 28.27 28.27 40.25 3.51
3301 3806 1.860676 TCTCCGTTGAAAAGTCCACG 58.139 50.000 0.00 0.00 41.37 4.94
3327 3832 6.713903 ACACTTGCAACTAGTACTAGTACTCA 59.286 38.462 33.47 23.17 44.96 3.41
3328 3833 7.143514 ACACTTGCAACTAGTACTAGTACTC 57.856 40.000 33.47 21.15 44.96 2.59
3330 3835 9.852091 ATTTACACTTGCAACTAGTACTAGTAC 57.148 33.333 30.89 25.41 44.96 2.73
3339 3844 8.840321 AGGCAATATATTTACACTTGCAACTAG 58.160 33.333 0.00 0.00 42.99 2.57
3341 3846 7.645058 AGGCAATATATTTACACTTGCAACT 57.355 32.000 0.00 0.00 42.99 3.16
3343 3848 9.717942 AAAAAGGCAATATATTTACACTTGCAA 57.282 25.926 0.00 0.00 42.99 4.08
3380 3890 3.307621 CCCAGGCAAGGCAACATATTTTT 60.308 43.478 0.00 0.00 41.41 1.94
3381 3891 2.236893 CCCAGGCAAGGCAACATATTTT 59.763 45.455 0.00 0.00 41.41 1.82
3382 3892 1.832998 CCCAGGCAAGGCAACATATTT 59.167 47.619 0.00 0.00 41.41 1.40
3383 3893 1.488390 CCCAGGCAAGGCAACATATT 58.512 50.000 0.00 0.00 41.41 1.28
3384 3894 3.212377 CCCAGGCAAGGCAACATAT 57.788 52.632 0.00 0.00 41.41 1.78
3385 3895 4.762016 CCCAGGCAAGGCAACATA 57.238 55.556 0.00 0.00 41.41 2.29
3392 3902 1.177401 GAAAAGTAGCCCAGGCAAGG 58.823 55.000 12.03 0.00 44.88 3.61
3393 3903 1.909700 TGAAAAGTAGCCCAGGCAAG 58.090 50.000 12.03 0.00 44.88 4.01
3394 3904 2.373335 TTGAAAAGTAGCCCAGGCAA 57.627 45.000 12.03 0.00 44.88 4.52
3395 3905 2.373335 TTTGAAAAGTAGCCCAGGCA 57.627 45.000 12.03 0.00 44.88 4.75
3411 3921 7.278646 CACTCCTTTTTCCTTCCTTTTCTTTTG 59.721 37.037 0.00 0.00 0.00 2.44
3422 3932 1.194772 CGTCGCACTCCTTTTTCCTTC 59.805 52.381 0.00 0.00 0.00 3.46
3425 3935 0.234884 CACGTCGCACTCCTTTTTCC 59.765 55.000 0.00 0.00 0.00 3.13
3431 3941 2.052690 ATAGCCACGTCGCACTCCT 61.053 57.895 8.15 0.00 0.00 3.69
3464 4038 0.032540 CAGCCATCGATCCATCACGA 59.967 55.000 0.00 0.00 42.49 4.35
3491 4069 9.573133 CTCTGTTTACTTGTCTTGTTCAAAAAT 57.427 29.630 0.00 0.00 0.00 1.82
3492 4070 8.026607 CCTCTGTTTACTTGTCTTGTTCAAAAA 58.973 33.333 0.00 0.00 0.00 1.94
3493 4071 7.535139 CCTCTGTTTACTTGTCTTGTTCAAAA 58.465 34.615 0.00 0.00 0.00 2.44
3494 4072 6.404293 GCCTCTGTTTACTTGTCTTGTTCAAA 60.404 38.462 0.00 0.00 0.00 2.69
3500 4078 4.024556 CACTGCCTCTGTTTACTTGTCTTG 60.025 45.833 0.00 0.00 0.00 3.02
3509 4087 2.965831 ACTGACTCACTGCCTCTGTTTA 59.034 45.455 0.00 0.00 0.00 2.01
3518 4096 1.339610 ACTGACTCACTGACTCACTGC 59.660 52.381 0.00 0.00 0.00 4.40
3523 4101 1.692296 GCGAACTGACTCACTGACTC 58.308 55.000 0.00 0.00 0.00 3.36
3527 4105 2.375766 GCCGCGAACTGACTCACTG 61.376 63.158 8.23 0.00 0.00 3.66
3528 4106 2.049063 GCCGCGAACTGACTCACT 60.049 61.111 8.23 0.00 0.00 3.41
3529 4107 2.355837 TGCCGCGAACTGACTCAC 60.356 61.111 8.23 0.00 0.00 3.51
3530 4108 2.049156 CTGCCGCGAACTGACTCA 60.049 61.111 8.23 0.00 0.00 3.41
3596 4174 3.786635 CAAGTATCCTCCGGAACTGAAG 58.213 50.000 5.23 0.00 34.34 3.02
3612 4190 0.685097 GTGGTGAGTGGAGGCAAGTA 59.315 55.000 0.00 0.00 0.00 2.24
3614 4192 0.179020 TTGTGGTGAGTGGAGGCAAG 60.179 55.000 0.00 0.00 0.00 4.01
3615 4193 0.465460 GTTGTGGTGAGTGGAGGCAA 60.465 55.000 0.00 0.00 0.00 4.52
3616 4194 1.148273 GTTGTGGTGAGTGGAGGCA 59.852 57.895 0.00 0.00 0.00 4.75
3617 4195 0.179018 AAGTTGTGGTGAGTGGAGGC 60.179 55.000 0.00 0.00 0.00 4.70
3618 4196 1.597742 CAAGTTGTGGTGAGTGGAGG 58.402 55.000 0.00 0.00 0.00 4.30
3621 4199 0.466189 AGGCAAGTTGTGGTGAGTGG 60.466 55.000 4.48 0.00 0.00 4.00
3623 4201 0.179018 GGAGGCAAGTTGTGGTGAGT 60.179 55.000 4.48 0.00 0.00 3.41
3640 4227 8.142551 GTCTTTCTTTCTAACTACTCAAGTGGA 58.857 37.037 0.09 0.00 38.88 4.02
3641 4228 7.115095 CGTCTTTCTTTCTAACTACTCAAGTGG 59.885 40.741 0.00 0.00 38.88 4.00
3642 4229 7.861372 TCGTCTTTCTTTCTAACTACTCAAGTG 59.139 37.037 0.00 0.00 38.88 3.16
3643 4230 7.938715 TCGTCTTTCTTTCTAACTACTCAAGT 58.061 34.615 0.00 0.00 41.49 3.16
3644 4231 8.798748 TTCGTCTTTCTTTCTAACTACTCAAG 57.201 34.615 0.00 0.00 0.00 3.02
3645 4232 9.760077 ATTTCGTCTTTCTTTCTAACTACTCAA 57.240 29.630 0.00 0.00 0.00 3.02
3646 4233 9.760077 AATTTCGTCTTTCTTTCTAACTACTCA 57.240 29.630 0.00 0.00 0.00 3.41
3649 4236 9.595357 CCAAATTTCGTCTTTCTTTCTAACTAC 57.405 33.333 0.00 0.00 0.00 2.73
3678 4265 5.505181 AGTCCAGAAAAGCCAAGAGAATA 57.495 39.130 0.00 0.00 0.00 1.75
3696 4283 0.901580 TGAGTGGTACCCCGAAGTCC 60.902 60.000 10.07 0.00 0.00 3.85
3707 4294 1.557099 AGCATTCGGAGTGAGTGGTA 58.443 50.000 4.52 0.00 42.41 3.25
3713 4300 1.067060 CCATCGTAGCATTCGGAGTGA 59.933 52.381 4.52 0.00 0.00 3.41
3714 4301 1.067060 TCCATCGTAGCATTCGGAGTG 59.933 52.381 0.00 0.00 0.00 3.51
3715 4302 1.338337 CTCCATCGTAGCATTCGGAGT 59.662 52.381 0.00 0.00 36.18 3.85
3716 4303 1.336332 CCTCCATCGTAGCATTCGGAG 60.336 57.143 0.00 0.00 39.82 4.63
3717 4304 0.673985 CCTCCATCGTAGCATTCGGA 59.326 55.000 0.00 0.00 0.00 4.55
3719 4306 2.332104 CATCCTCCATCGTAGCATTCG 58.668 52.381 0.00 0.00 0.00 3.34
3720 4307 2.300152 TCCATCCTCCATCGTAGCATTC 59.700 50.000 0.00 0.00 0.00 2.67
3721 4308 2.301296 CTCCATCCTCCATCGTAGCATT 59.699 50.000 0.00 0.00 0.00 3.56
3722 4309 1.898472 CTCCATCCTCCATCGTAGCAT 59.102 52.381 0.00 0.00 0.00 3.79
3723 4310 1.332195 CTCCATCCTCCATCGTAGCA 58.668 55.000 0.00 0.00 0.00 3.49
3724 4311 0.605589 CCTCCATCCTCCATCGTAGC 59.394 60.000 0.00 0.00 0.00 3.58
3725 4312 2.002505 ACCTCCATCCTCCATCGTAG 57.997 55.000 0.00 0.00 0.00 3.51
3726 4313 2.225041 CCTACCTCCATCCTCCATCGTA 60.225 54.545 0.00 0.00 0.00 3.43
3727 4314 1.481428 CCTACCTCCATCCTCCATCGT 60.481 57.143 0.00 0.00 0.00 3.73
3729 4316 1.150135 TCCCTACCTCCATCCTCCATC 59.850 57.143 0.00 0.00 0.00 3.51
3731 4318 0.563173 CTCCCTACCTCCATCCTCCA 59.437 60.000 0.00 0.00 0.00 3.86
3732 4319 0.861155 TCTCCCTACCTCCATCCTCC 59.139 60.000 0.00 0.00 0.00 4.30
3733 4320 1.203125 CCTCTCCCTACCTCCATCCTC 60.203 61.905 0.00 0.00 0.00 3.71
3735 4322 0.178918 CCCTCTCCCTACCTCCATCC 60.179 65.000 0.00 0.00 0.00 3.51
3736 4323 0.834261 GCCCTCTCCCTACCTCCATC 60.834 65.000 0.00 0.00 0.00 3.51
3738 4325 2.243774 CTGCCCTCTCCCTACCTCCA 62.244 65.000 0.00 0.00 0.00 3.86
3739 4326 1.458588 CTGCCCTCTCCCTACCTCC 60.459 68.421 0.00 0.00 0.00 4.30
3742 4329 1.116536 GCTACTGCCCTCTCCCTACC 61.117 65.000 0.00 0.00 0.00 3.18
3770 4357 2.221517 TCGAATACATGCATGCATCACG 59.778 45.455 30.07 25.60 33.90 4.35
3771 4358 3.249320 ACTCGAATACATGCATGCATCAC 59.751 43.478 30.07 16.94 33.90 3.06
3773 4360 4.478843 AACTCGAATACATGCATGCATC 57.521 40.909 30.07 18.29 33.90 3.91
3790 4377 4.571176 GGTCCCATTTGATTCGAGTAACTC 59.429 45.833 0.00 0.00 0.00 3.01
3791 4378 4.514401 GGTCCCATTTGATTCGAGTAACT 58.486 43.478 0.00 0.00 0.00 2.24
3792 4379 3.626217 GGGTCCCATTTGATTCGAGTAAC 59.374 47.826 1.78 0.00 0.00 2.50
3793 4380 3.680475 CGGGTCCCATTTGATTCGAGTAA 60.680 47.826 9.12 0.00 0.00 2.24
3794 4381 2.159014 CGGGTCCCATTTGATTCGAGTA 60.159 50.000 9.12 0.00 0.00 2.59
3795 4382 1.406887 CGGGTCCCATTTGATTCGAGT 60.407 52.381 9.12 0.00 0.00 4.18
3797 4384 0.616371 ACGGGTCCCATTTGATTCGA 59.384 50.000 9.12 0.00 0.00 3.71
3799 4386 1.472480 CACACGGGTCCCATTTGATTC 59.528 52.381 9.12 0.00 0.00 2.52
3802 4389 0.536233 CACACACGGGTCCCATTTGA 60.536 55.000 9.12 0.00 0.00 2.69
3803 4390 0.821711 ACACACACGGGTCCCATTTG 60.822 55.000 9.12 0.00 0.00 2.32
3806 4393 2.429930 CACACACACGGGTCCCAT 59.570 61.111 9.12 0.00 0.00 4.00
3807 4394 4.555709 GCACACACACGGGTCCCA 62.556 66.667 9.12 0.00 0.00 4.37
3817 4404 3.474904 TATCACGCGCGCACACAC 61.475 61.111 32.58 0.00 0.00 3.82
3818 4405 2.530465 TAGTATCACGCGCGCACACA 62.530 55.000 32.58 11.93 0.00 3.72
3819 4406 1.407721 TTAGTATCACGCGCGCACAC 61.408 55.000 32.58 21.78 0.00 3.82
3820 4407 0.526739 ATTAGTATCACGCGCGCACA 60.527 50.000 32.58 14.73 0.00 4.57
3821 4408 0.158928 GATTAGTATCACGCGCGCAC 59.841 55.000 32.58 20.99 0.00 5.34
3822 4409 0.937699 GGATTAGTATCACGCGCGCA 60.938 55.000 32.58 18.20 32.09 6.09
3823 4410 0.937699 TGGATTAGTATCACGCGCGC 60.938 55.000 32.58 23.91 32.09 6.86
3824 4411 1.053048 CTGGATTAGTATCACGCGCG 58.947 55.000 30.96 30.96 32.09 6.86
3825 4412 2.052157 GTCTGGATTAGTATCACGCGC 58.948 52.381 5.73 0.00 32.09 6.86
3826 4413 3.556513 GAGTCTGGATTAGTATCACGCG 58.443 50.000 3.53 3.53 32.09 6.01
3827 4414 3.570550 AGGAGTCTGGATTAGTATCACGC 59.429 47.826 0.00 0.00 32.09 5.34
3828 4415 5.067273 AGAGGAGTCTGGATTAGTATCACG 58.933 45.833 0.00 0.00 32.09 4.35
3829 4416 6.969993 AAGAGGAGTCTGGATTAGTATCAC 57.030 41.667 0.00 0.00 31.37 3.06
3830 4417 7.979786 AAAAGAGGAGTCTGGATTAGTATCA 57.020 36.000 0.00 0.00 31.37 2.15
3833 4420 9.268282 ACATAAAAAGAGGAGTCTGGATTAGTA 57.732 33.333 0.00 0.00 31.37 1.82
3834 4421 8.043710 CACATAAAAAGAGGAGTCTGGATTAGT 58.956 37.037 0.00 0.00 31.37 2.24
3835 4422 8.043710 ACACATAAAAAGAGGAGTCTGGATTAG 58.956 37.037 0.00 0.00 31.37 1.73
3836 4423 7.824289 CACACATAAAAAGAGGAGTCTGGATTA 59.176 37.037 0.00 0.00 31.37 1.75
3837 4424 6.656693 CACACATAAAAAGAGGAGTCTGGATT 59.343 38.462 0.00 0.00 31.37 3.01
3838 4425 6.176183 CACACATAAAAAGAGGAGTCTGGAT 58.824 40.000 0.00 0.00 31.37 3.41
3839 4426 5.071788 ACACACATAAAAAGAGGAGTCTGGA 59.928 40.000 0.00 0.00 31.37 3.86
3840 4427 5.180117 CACACACATAAAAAGAGGAGTCTGG 59.820 44.000 0.00 0.00 31.37 3.86
3841 4428 5.760253 ACACACACATAAAAAGAGGAGTCTG 59.240 40.000 0.00 0.00 31.37 3.51
3842 4429 5.760253 CACACACACATAAAAAGAGGAGTCT 59.240 40.000 0.00 0.00 32.81 3.24
3843 4430 5.758296 TCACACACACATAAAAAGAGGAGTC 59.242 40.000 0.00 0.00 0.00 3.36
3844 4431 5.680619 TCACACACACATAAAAAGAGGAGT 58.319 37.500 0.00 0.00 0.00 3.85
3845 4432 6.483307 TCTTCACACACACATAAAAAGAGGAG 59.517 38.462 0.00 0.00 0.00 3.69
3846 4433 6.353323 TCTTCACACACACATAAAAAGAGGA 58.647 36.000 0.00 0.00 0.00 3.71
3847 4434 6.618287 TCTTCACACACACATAAAAAGAGG 57.382 37.500 0.00 0.00 0.00 3.69
3848 4435 7.864686 TCATCTTCACACACACATAAAAAGAG 58.135 34.615 0.00 0.00 0.00 2.85
3849 4436 7.800155 TCATCTTCACACACACATAAAAAGA 57.200 32.000 0.00 0.00 0.00 2.52
3855 4442 9.492973 CCATATAATCATCTTCACACACACATA 57.507 33.333 0.00 0.00 0.00 2.29
3856 4443 7.040892 GCCATATAATCATCTTCACACACACAT 60.041 37.037 0.00 0.00 0.00 3.21
3857 4444 6.260714 GCCATATAATCATCTTCACACACACA 59.739 38.462 0.00 0.00 0.00 3.72
3858 4445 6.484643 AGCCATATAATCATCTTCACACACAC 59.515 38.462 0.00 0.00 0.00 3.82
3859 4446 6.594744 AGCCATATAATCATCTTCACACACA 58.405 36.000 0.00 0.00 0.00 3.72
3860 4447 8.663025 CATAGCCATATAATCATCTTCACACAC 58.337 37.037 0.00 0.00 0.00 3.82
3861 4448 8.596293 TCATAGCCATATAATCATCTTCACACA 58.404 33.333 0.00 0.00 0.00 3.72
3862 4449 9.096160 CTCATAGCCATATAATCATCTTCACAC 57.904 37.037 0.00 0.00 0.00 3.82
3863 4450 7.767659 GCTCATAGCCATATAATCATCTTCACA 59.232 37.037 0.00 0.00 34.48 3.58
3864 4451 7.042858 CGCTCATAGCCATATAATCATCTTCAC 60.043 40.741 0.00 0.00 38.18 3.18
3865 4452 6.982724 CGCTCATAGCCATATAATCATCTTCA 59.017 38.462 0.00 0.00 38.18 3.02
3866 4453 6.983307 ACGCTCATAGCCATATAATCATCTTC 59.017 38.462 0.00 0.00 38.18 2.87
3867 4454 6.882656 ACGCTCATAGCCATATAATCATCTT 58.117 36.000 0.00 0.00 38.18 2.40
3868 4455 6.097412 TGACGCTCATAGCCATATAATCATCT 59.903 38.462 0.00 0.00 38.18 2.90
3869 4456 6.199908 GTGACGCTCATAGCCATATAATCATC 59.800 42.308 0.00 0.00 38.18 2.92
3870 4457 6.045318 GTGACGCTCATAGCCATATAATCAT 58.955 40.000 0.00 0.00 38.18 2.45
3871 4458 5.410924 GTGACGCTCATAGCCATATAATCA 58.589 41.667 0.00 0.00 38.18 2.57
3872 4459 4.806247 GGTGACGCTCATAGCCATATAATC 59.194 45.833 0.00 0.00 38.18 1.75
3873 4460 4.759782 GGTGACGCTCATAGCCATATAAT 58.240 43.478 0.00 0.00 38.18 1.28
3874 4461 4.188247 GGTGACGCTCATAGCCATATAA 57.812 45.455 0.00 0.00 38.18 0.98
3875 4462 3.868757 GGTGACGCTCATAGCCATATA 57.131 47.619 0.00 0.00 38.18 0.86
3876 4463 2.751166 GGTGACGCTCATAGCCATAT 57.249 50.000 0.00 0.00 38.18 1.78
3890 4477 1.435515 CTAGCTCTGCTCCGGTGAC 59.564 63.158 7.92 0.00 40.44 3.67
3891 4478 2.418910 GCTAGCTCTGCTCCGGTGA 61.419 63.158 7.70 0.00 40.44 4.02
3892 4479 1.103987 TAGCTAGCTCTGCTCCGGTG 61.104 60.000 23.26 0.00 40.44 4.94
3893 4480 1.104577 GTAGCTAGCTCTGCTCCGGT 61.105 60.000 23.26 0.00 40.44 5.28
3894 4481 0.821711 AGTAGCTAGCTCTGCTCCGG 60.822 60.000 23.26 0.00 40.44 5.14
3895 4482 1.533731 GTAGTAGCTAGCTCTGCTCCG 59.466 57.143 23.26 0.00 40.44 4.63
3896 4483 1.883926 GGTAGTAGCTAGCTCTGCTCC 59.116 57.143 23.26 14.39 40.44 4.70
3897 4484 2.577700 TGGTAGTAGCTAGCTCTGCTC 58.422 52.381 23.26 14.44 40.44 4.26
3898 4485 2.738587 TGGTAGTAGCTAGCTCTGCT 57.261 50.000 23.26 19.24 43.41 4.24
3899 4486 3.131400 AGTTTGGTAGTAGCTAGCTCTGC 59.869 47.826 23.26 19.60 35.72 4.26
3900 4487 4.399618 TCAGTTTGGTAGTAGCTAGCTCTG 59.600 45.833 23.26 17.99 35.72 3.35
3901 4488 4.601084 TCAGTTTGGTAGTAGCTAGCTCT 58.399 43.478 23.26 19.41 35.72 4.09
3902 4489 4.985538 TCAGTTTGGTAGTAGCTAGCTC 57.014 45.455 23.26 13.06 35.72 4.09
3903 4490 5.422331 TCATTCAGTTTGGTAGTAGCTAGCT 59.578 40.000 23.12 23.12 35.72 3.32
3904 4491 5.661458 TCATTCAGTTTGGTAGTAGCTAGC 58.339 41.667 6.62 6.62 35.32 3.42
3905 4492 8.547967 TTTTCATTCAGTTTGGTAGTAGCTAG 57.452 34.615 0.00 0.00 0.00 3.42
3906 4493 9.162764 GATTTTCATTCAGTTTGGTAGTAGCTA 57.837 33.333 0.35 0.00 0.00 3.32
3907 4494 7.148407 CGATTTTCATTCAGTTTGGTAGTAGCT 60.148 37.037 0.35 0.00 0.00 3.32
3908 4495 6.961554 CGATTTTCATTCAGTTTGGTAGTAGC 59.038 38.462 0.00 0.00 0.00 3.58
3925 4512 8.088365 TCTTTCTCAGTTAGTGATCGATTTTCA 58.912 33.333 0.00 0.00 33.51 2.69
3926 4513 8.467402 TCTTTCTCAGTTAGTGATCGATTTTC 57.533 34.615 0.00 0.00 33.51 2.29
3927 4514 8.833231 TTCTTTCTCAGTTAGTGATCGATTTT 57.167 30.769 0.00 0.00 33.51 1.82
3928 4515 8.833231 TTTCTTTCTCAGTTAGTGATCGATTT 57.167 30.769 0.00 0.00 33.51 2.17
3931 4518 9.923143 TTATTTTCTTTCTCAGTTAGTGATCGA 57.077 29.630 0.00 0.00 33.51 3.59
3958 4545 5.987347 GCCGGACTTGTATTACTAGCATTAA 59.013 40.000 5.05 0.00 0.00 1.40
3961 4548 3.552273 CGCCGGACTTGTATTACTAGCAT 60.552 47.826 5.05 0.00 0.00 3.79
3963 4550 2.033801 TCGCCGGACTTGTATTACTAGC 59.966 50.000 5.05 0.00 0.00 3.42
3964 4551 3.852572 GCTCGCCGGACTTGTATTACTAG 60.853 52.174 5.05 4.07 0.00 2.57
3966 4553 1.202382 GCTCGCCGGACTTGTATTACT 60.202 52.381 5.05 0.00 0.00 2.24
3967 4554 1.206523 GCTCGCCGGACTTGTATTAC 58.793 55.000 5.05 0.00 0.00 1.89
3983 4570 0.320771 TCCTGTTTCCTTGCTCGCTC 60.321 55.000 0.00 0.00 0.00 5.03
3991 4578 2.745152 CGTTGGTGAGTCCTGTTTCCTT 60.745 50.000 0.00 0.00 37.07 3.36
3997 4592 0.249911 GCTTCGTTGGTGAGTCCTGT 60.250 55.000 0.00 0.00 37.07 4.00
4009 4604 1.613925 TGTCTGTCTAGCTGCTTCGTT 59.386 47.619 7.79 0.00 0.00 3.85
4023 4618 1.759562 GCCCCCTAGCTATCTGTCTGT 60.760 57.143 0.00 0.00 0.00 3.41
4066 4665 0.111253 CTCCCTGGCTTTGACTGGTT 59.889 55.000 0.00 0.00 0.00 3.67
4067 4666 0.768221 TCTCCCTGGCTTTGACTGGT 60.768 55.000 0.00 0.00 0.00 4.00
4074 4673 1.260544 GTGCATTTCTCCCTGGCTTT 58.739 50.000 0.00 0.00 0.00 3.51
4093 4692 1.134965 CACTCTAGCCCTTCTTGTCCG 60.135 57.143 0.00 0.00 0.00 4.79
4096 4695 4.342665 GCTATACACTCTAGCCCTTCTTGT 59.657 45.833 0.00 0.00 36.43 3.16
4102 4701 2.491825 CCCTGCTATACACTCTAGCCCT 60.492 54.545 0.30 0.00 40.72 5.19
4104 4703 1.896465 CCCCTGCTATACACTCTAGCC 59.104 57.143 0.30 0.00 40.72 3.93
4115 4714 2.877154 TCTTCCTCTTCCCCTGCTAT 57.123 50.000 0.00 0.00 0.00 2.97
4116 4715 2.044492 TCTTCTTCCTCTTCCCCTGCTA 59.956 50.000 0.00 0.00 0.00 3.49
4117 4716 1.203364 TCTTCTTCCTCTTCCCCTGCT 60.203 52.381 0.00 0.00 0.00 4.24
4118 4717 1.280457 TCTTCTTCCTCTTCCCCTGC 58.720 55.000 0.00 0.00 0.00 4.85
4119 4718 3.265479 ACAATCTTCTTCCTCTTCCCCTG 59.735 47.826 0.00 0.00 0.00 4.45
4120 4719 3.521531 GACAATCTTCTTCCTCTTCCCCT 59.478 47.826 0.00 0.00 0.00 4.79
4121 4720 3.371059 GGACAATCTTCTTCCTCTTCCCC 60.371 52.174 0.00 0.00 0.00 4.81
4122 4721 3.264450 TGGACAATCTTCTTCCTCTTCCC 59.736 47.826 0.00 0.00 0.00 3.97
4123 4722 4.559862 TGGACAATCTTCTTCCTCTTCC 57.440 45.455 0.00 0.00 0.00 3.46
4124 4723 4.940654 CCTTGGACAATCTTCTTCCTCTTC 59.059 45.833 0.00 0.00 0.00 2.87
4125 4724 4.599241 TCCTTGGACAATCTTCTTCCTCTT 59.401 41.667 0.00 0.00 0.00 2.85
4144 4743 0.332972 GCCTCCTCCAACCATTCCTT 59.667 55.000 0.00 0.00 0.00 3.36
4200 4799 1.156736 GCCGTGTGCAATCTACACTT 58.843 50.000 0.00 0.00 44.70 3.16
4317 4919 0.618458 TCGAGTTAATTGCCTGGCCT 59.382 50.000 17.53 4.19 0.00 5.19
4337 4939 1.532921 GCAGGAGTTGACTCGATCGAG 60.533 57.143 36.95 36.95 46.91 4.04
4338 4940 0.452184 GCAGGAGTTGACTCGATCGA 59.548 55.000 18.32 18.32 43.76 3.59
4339 4941 0.863538 CGCAGGAGTTGACTCGATCG 60.864 60.000 9.36 9.36 43.76 3.69
4421 5040 1.492133 TTGGCTAAGCTGCTGGAGGT 61.492 55.000 1.35 0.00 0.00 3.85
4542 5161 4.282496 TGGAGTTGGCTTACTTTTTCCAA 58.718 39.130 0.00 0.00 36.35 3.53
4543 5162 3.904717 TGGAGTTGGCTTACTTTTTCCA 58.095 40.909 0.00 0.00 0.00 3.53
4551 5170 2.000447 CTAGCGTTGGAGTTGGCTTAC 59.000 52.381 0.00 0.00 36.97 2.34
4552 5171 1.897133 TCTAGCGTTGGAGTTGGCTTA 59.103 47.619 0.00 0.00 36.97 3.09
4560 5180 2.279582 AATGTCGTCTAGCGTTGGAG 57.720 50.000 6.49 0.00 42.13 3.86
4591 5211 3.185391 GTCTGGCGACTTCTCAAAGAAAG 59.815 47.826 0.00 0.00 33.19 2.62
4592 5212 3.131396 GTCTGGCGACTTCTCAAAGAAA 58.869 45.455 0.00 0.00 33.19 2.52
4593 5213 2.755650 GTCTGGCGACTTCTCAAAGAA 58.244 47.619 0.00 0.00 37.19 2.52
4594 5214 1.335964 CGTCTGGCGACTTCTCAAAGA 60.336 52.381 0.00 0.00 44.77 2.52
4595 5215 1.063806 CGTCTGGCGACTTCTCAAAG 58.936 55.000 0.00 0.00 44.77 2.77
4596 5216 0.671796 TCGTCTGGCGACTTCTCAAA 59.328 50.000 0.00 0.00 45.68 2.69
4597 5217 2.337361 TCGTCTGGCGACTTCTCAA 58.663 52.632 0.00 0.00 45.68 3.02
4616 5236 2.580276 AAGCGGCCGGACGATTTA 59.420 55.556 38.91 0.00 39.72 1.40
4627 5247 1.296056 TGGCTCTAAACGAAAGCGGC 61.296 55.000 0.00 0.00 43.17 6.53
4628 5248 1.153353 TTGGCTCTAAACGAAAGCGG 58.847 50.000 0.00 0.00 43.17 5.52
4631 5251 4.537015 CCAAGTTTGGCTCTAAACGAAAG 58.463 43.478 0.00 0.00 43.51 2.62
4632 5252 4.561735 CCAAGTTTGGCTCTAAACGAAA 57.438 40.909 0.00 0.00 43.51 3.46
4645 5265 4.748409 CCGTTTGGGCCAAGTTTG 57.252 55.556 19.90 10.21 0.00 2.93
4664 5284 1.398692 ATTTGTCTGTTTGGGCACGT 58.601 45.000 0.00 0.00 0.00 4.49
4665 5285 2.126467 CAATTTGTCTGTTTGGGCACG 58.874 47.619 0.00 0.00 0.00 5.34
4668 5288 2.754472 GGACAATTTGTCTGTTTGGGC 58.246 47.619 24.60 6.07 46.19 5.36
4669 5289 3.011949 CGGACAATTTGTCTGTTTGGG 57.988 47.619 24.26 6.62 46.05 4.12
4677 5297 0.951558 ACACCTGCGGACAATTTGTC 59.048 50.000 19.17 19.17 46.23 3.18
4679 5299 1.197721 GAGACACCTGCGGACAATTTG 59.802 52.381 0.00 0.00 0.00 2.32
4713 5334 7.632721 CAAATTTGTTTCAGATTTGGAGTTGG 58.367 34.615 10.15 0.00 40.16 3.77
4746 5367 5.144100 TGTTTATGTCCTCACAAACCCATT 58.856 37.500 0.81 0.00 39.38 3.16
4751 5372 5.527582 AGTGTCTGTTTATGTCCTCACAAAC 59.472 40.000 0.00 0.00 40.21 2.93
4769 5390 1.342819 GAGCAACCAGTGAGAGTGTCT 59.657 52.381 0.00 0.00 0.00 3.41
4772 5393 2.141517 CAAGAGCAACCAGTGAGAGTG 58.858 52.381 0.00 0.00 0.00 3.51
4779 5400 0.687354 ATCGGACAAGAGCAACCAGT 59.313 50.000 0.00 0.00 0.00 4.00
4789 5410 0.439985 CAACAGACGCATCGGACAAG 59.560 55.000 0.00 0.00 0.00 3.16
4797 5418 3.058160 GCCAGCCAACAGACGCAT 61.058 61.111 0.00 0.00 0.00 4.73
4804 5425 0.899717 GATTTCTGGGCCAGCCAACA 60.900 55.000 29.02 8.37 37.98 3.33
4806 5427 0.612732 CTGATTTCTGGGCCAGCCAA 60.613 55.000 29.02 22.36 37.98 4.52
4811 5432 0.038166 GGTCACTGATTTCTGGGCCA 59.962 55.000 5.85 5.85 0.00 5.36
4814 5435 2.836981 AGAGAGGTCACTGATTTCTGGG 59.163 50.000 1.23 0.00 0.00 4.45
4824 5445 1.305718 GGGAGGCAGAGAGGTCACT 60.306 63.158 0.00 0.00 0.00 3.41
4831 5452 1.685077 CAGAGCAGGGAGGCAGAGA 60.685 63.158 0.00 0.00 35.83 3.10
4843 5465 3.774528 CAGCGGGGTAGCAGAGCA 61.775 66.667 7.93 0.00 40.15 4.26
4847 5469 4.514577 CGTCCAGCGGGGTAGCAG 62.515 72.222 2.05 0.00 40.15 4.24
4887 5509 4.025401 CTTCGGTGCACCAACGGC 62.025 66.667 34.16 7.59 45.36 5.68
4888 5510 2.590575 ACTTCGGTGCACCAACGG 60.591 61.111 34.16 21.82 45.36 4.44
4889 5511 1.557443 GAGACTTCGGTGCACCAACG 61.557 60.000 34.16 22.42 46.80 4.10
4890 5512 1.557443 CGAGACTTCGGTGCACCAAC 61.557 60.000 34.16 19.04 43.05 3.77
4891 5513 1.300620 CGAGACTTCGGTGCACCAA 60.301 57.895 34.16 24.26 43.05 3.67
4892 5514 2.338620 CGAGACTTCGGTGCACCA 59.661 61.111 34.16 19.11 43.05 4.17
4893 5515 3.112709 GCGAGACTTCGGTGCACC 61.113 66.667 26.78 26.78 46.76 5.01
4899 5521 2.492090 CAGGGAGCGAGACTTCGG 59.508 66.667 0.00 0.00 46.76 4.30
4917 5539 3.899981 TTGCTAGTGCCTGCGGTGG 62.900 63.158 0.00 0.00 38.71 4.61
4918 5540 2.358615 TTGCTAGTGCCTGCGGTG 60.359 61.111 0.00 0.00 38.71 4.94
4919 5541 2.358737 GTTGCTAGTGCCTGCGGT 60.359 61.111 0.00 0.00 38.71 5.68
4920 5542 3.127533 GGTTGCTAGTGCCTGCGG 61.128 66.667 0.00 0.00 38.71 5.69
4921 5543 3.490759 CGGTTGCTAGTGCCTGCG 61.491 66.667 0.00 0.00 38.71 5.18
4922 5544 3.127533 CCGGTTGCTAGTGCCTGC 61.128 66.667 0.00 0.00 38.71 4.85
4923 5545 1.448540 CTCCGGTTGCTAGTGCCTG 60.449 63.158 0.00 0.00 38.71 4.85
4924 5546 2.982130 CTCCGGTTGCTAGTGCCT 59.018 61.111 0.00 0.00 38.71 4.75
4925 5547 2.820037 GCTCCGGTTGCTAGTGCC 60.820 66.667 13.37 0.00 38.71 5.01
4926 5548 2.047274 TGCTCCGGTTGCTAGTGC 60.047 61.111 19.31 6.25 40.20 4.40
4927 5549 2.103042 GCTGCTCCGGTTGCTAGTG 61.103 63.158 19.31 10.36 0.00 2.74
4928 5550 2.266055 GCTGCTCCGGTTGCTAGT 59.734 61.111 19.31 0.00 0.00 2.57
4929 5551 2.103042 GTGCTGCTCCGGTTGCTAG 61.103 63.158 19.31 15.69 0.00 3.42
4930 5552 2.047274 GTGCTGCTCCGGTTGCTA 60.047 61.111 19.31 8.28 0.00 3.49
4947 5569 0.930742 GGAATAGAGCGACGACAGCG 60.931 60.000 0.00 0.00 44.79 5.18
4948 5570 0.382515 AGGAATAGAGCGACGACAGC 59.617 55.000 0.00 0.00 0.00 4.40
4949 5571 2.455032 CAAGGAATAGAGCGACGACAG 58.545 52.381 0.00 0.00 0.00 3.51
4950 5572 1.134367 CCAAGGAATAGAGCGACGACA 59.866 52.381 0.00 0.00 0.00 4.35
4951 5573 1.536284 CCCAAGGAATAGAGCGACGAC 60.536 57.143 0.00 0.00 0.00 4.34
4952 5574 0.744874 CCCAAGGAATAGAGCGACGA 59.255 55.000 0.00 0.00 0.00 4.20
4953 5575 0.876342 GCCCAAGGAATAGAGCGACG 60.876 60.000 0.00 0.00 0.00 5.12
4954 5576 0.466124 AGCCCAAGGAATAGAGCGAC 59.534 55.000 0.00 0.00 0.00 5.19
4955 5577 0.753262 GAGCCCAAGGAATAGAGCGA 59.247 55.000 0.00 0.00 0.00 4.93
4956 5578 0.250081 GGAGCCCAAGGAATAGAGCG 60.250 60.000 0.00 0.00 0.00 5.03
4957 5579 0.109532 GGGAGCCCAAGGAATAGAGC 59.890 60.000 0.00 0.00 35.81 4.09
4958 5580 0.767998 GGGGAGCCCAAGGAATAGAG 59.232 60.000 8.02 0.00 44.65 2.43
4959 5581 1.054406 CGGGGAGCCCAAGGAATAGA 61.054 60.000 8.02 0.00 45.83 1.98
4960 5582 1.451936 CGGGGAGCCCAAGGAATAG 59.548 63.158 8.02 0.00 45.83 1.73
4961 5583 2.752807 GCGGGGAGCCCAAGGAATA 61.753 63.158 8.02 0.00 45.83 1.75
4962 5584 4.129148 GCGGGGAGCCCAAGGAAT 62.129 66.667 8.02 0.00 45.83 3.01
4972 5594 0.114560 TAGAATAGAGGGGCGGGGAG 59.885 60.000 0.00 0.00 0.00 4.30
4973 5595 0.114560 CTAGAATAGAGGGGCGGGGA 59.885 60.000 0.00 0.00 42.77 4.81
4974 5596 0.178929 ACTAGAATAGAGGGGCGGGG 60.179 60.000 0.00 0.00 42.77 5.73
4975 5597 0.969894 CACTAGAATAGAGGGGCGGG 59.030 60.000 0.00 0.00 42.77 6.13
4976 5598 1.996798 TCACTAGAATAGAGGGGCGG 58.003 55.000 0.00 0.00 42.77 6.13
4977 5599 2.693591 TGTTCACTAGAATAGAGGGGCG 59.306 50.000 0.00 0.00 42.77 6.13
4978 5600 3.070302 CCTGTTCACTAGAATAGAGGGGC 59.930 52.174 0.00 0.00 43.37 5.80
4979 5601 3.643792 CCCTGTTCACTAGAATAGAGGGG 59.356 52.174 13.45 6.18 43.37 4.79
4980 5602 4.342665 GTCCCTGTTCACTAGAATAGAGGG 59.657 50.000 14.49 14.49 43.37 4.30
4981 5603 4.956700 TGTCCCTGTTCACTAGAATAGAGG 59.043 45.833 0.00 0.00 43.37 3.69
4982 5604 5.068460 CCTGTCCCTGTTCACTAGAATAGAG 59.932 48.000 0.00 0.00 43.37 2.43
4983 5605 4.956700 CCTGTCCCTGTTCACTAGAATAGA 59.043 45.833 0.00 0.00 43.37 1.98
4984 5606 4.100189 CCCTGTCCCTGTTCACTAGAATAG 59.900 50.000 0.00 0.00 46.50 1.73
4985 5607 4.030913 CCCTGTCCCTGTTCACTAGAATA 58.969 47.826 0.00 0.00 35.92 1.75
4986 5608 2.840651 CCCTGTCCCTGTTCACTAGAAT 59.159 50.000 0.00 0.00 35.92 2.40
4987 5609 2.158219 TCCCTGTCCCTGTTCACTAGAA 60.158 50.000 0.00 0.00 0.00 2.10
4988 5610 1.431633 TCCCTGTCCCTGTTCACTAGA 59.568 52.381 0.00 0.00 0.00 2.43
4989 5611 1.550976 GTCCCTGTCCCTGTTCACTAG 59.449 57.143 0.00 0.00 0.00 2.57
4990 5612 1.149288 AGTCCCTGTCCCTGTTCACTA 59.851 52.381 0.00 0.00 0.00 2.74
4991 5613 0.104934 AGTCCCTGTCCCTGTTCACT 60.105 55.000 0.00 0.00 0.00 3.41
4992 5614 0.321996 GAGTCCCTGTCCCTGTTCAC 59.678 60.000 0.00 0.00 0.00 3.18
4993 5615 0.836400 GGAGTCCCTGTCCCTGTTCA 60.836 60.000 0.00 0.00 0.00 3.18
4994 5616 0.836400 TGGAGTCCCTGTCCCTGTTC 60.836 60.000 6.74 0.00 32.49 3.18
4995 5617 1.128188 GTGGAGTCCCTGTCCCTGTT 61.128 60.000 6.74 0.00 32.49 3.16
4996 5618 1.536662 GTGGAGTCCCTGTCCCTGT 60.537 63.158 6.74 0.00 32.49 4.00
4997 5619 2.294078 GGTGGAGTCCCTGTCCCTG 61.294 68.421 6.74 0.00 32.49 4.45
4998 5620 2.122954 GGTGGAGTCCCTGTCCCT 59.877 66.667 6.74 0.00 32.49 4.20
4999 5621 1.990614 GAGGTGGAGTCCCTGTCCC 60.991 68.421 6.74 0.00 32.49 4.46
5000 5622 2.352032 CGAGGTGGAGTCCCTGTCC 61.352 68.421 6.74 4.30 30.60 4.02
5001 5623 1.304217 TCGAGGTGGAGTCCCTGTC 60.304 63.158 6.74 0.00 30.60 3.51
5002 5624 1.606889 GTCGAGGTGGAGTCCCTGT 60.607 63.158 6.74 0.00 30.60 4.00
5003 5625 2.701780 CGTCGAGGTGGAGTCCCTG 61.702 68.421 6.74 0.00 30.60 4.45
5004 5626 2.361357 CGTCGAGGTGGAGTCCCT 60.361 66.667 6.74 0.00 34.11 4.20
5005 5627 2.675772 ACGTCGAGGTGGAGTCCC 60.676 66.667 10.45 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.