Multiple sequence alignment - TraesCS5D01G471600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G471600 chr5D 100.000 3637 0 0 1 3637 512420092 512423728 0.000000e+00 6717.0
1 TraesCS5D01G471600 chr6D 96.842 3135 61 11 534 3637 379331751 379328624 0.000000e+00 5206.0
2 TraesCS5D01G471600 chr7A 94.037 1962 101 7 1686 3637 83259262 83257307 0.000000e+00 2961.0
3 TraesCS5D01G471600 chr7A 89.418 1049 85 9 664 1690 83268611 83267567 0.000000e+00 1299.0
4 TraesCS5D01G471600 chr7A 83.345 1381 185 28 1796 3149 611968210 611966848 0.000000e+00 1234.0
5 TraesCS5D01G471600 chr7A 96.429 140 3 2 534 673 83270871 83270734 2.820000e-56 230.0
6 TraesCS5D01G471600 chr7B 94.063 1836 70 9 593 2403 612900300 612898479 0.000000e+00 2750.0
7 TraesCS5D01G471600 chr2B 93.658 1766 84 7 533 2272 747858995 747860758 0.000000e+00 2615.0
8 TraesCS5D01G471600 chr2B 97.746 488 11 0 2193 2680 747861438 747861925 0.000000e+00 841.0
9 TraesCS5D01G471600 chr5B 90.581 1911 155 14 1742 3637 677708656 677706756 0.000000e+00 2508.0
10 TraesCS5D01G471600 chr5B 82.277 694 82 22 886 1545 677709342 677708656 2.450000e-156 562.0
11 TraesCS5D01G471600 chr5B 88.710 310 13 12 64 358 23687057 23686755 3.450000e-95 359.0
12 TraesCS5D01G471600 chr5B 94.872 117 4 2 551 667 677712042 677711928 8.020000e-42 182.0
13 TraesCS5D01G471600 chr5B 94.286 105 4 2 430 534 23686757 23686655 3.760000e-35 159.0
14 TraesCS5D01G471600 chr3B 84.262 1652 211 29 1792 3410 65277236 65278871 0.000000e+00 1565.0
15 TraesCS5D01G471600 chr3B 97.727 44 1 0 435 478 773573969 773574012 3.890000e-10 76.8
16 TraesCS5D01G471600 chr3D 83.795 1407 169 32 1796 3176 407493407 407494780 0.000000e+00 1280.0
17 TraesCS5D01G471600 chr3D 89.899 198 20 0 2738 2935 567704800 567704997 4.660000e-64 255.0
18 TraesCS5D01G471600 chr2D 97.297 592 16 0 532 1123 627149216 627148625 0.000000e+00 1005.0
19 TraesCS5D01G471600 chr2D 99.036 415 2 2 3224 3637 627148627 627148214 0.000000e+00 743.0
20 TraesCS5D01G471600 chr2D 81.655 278 30 5 2150 2425 637026120 637026378 1.020000e-50 211.0
21 TraesCS5D01G471600 chr2D 78.610 187 37 2 1169 1355 637025588 637025771 1.770000e-23 121.0
22 TraesCS5D01G471600 chr6B 87.821 468 55 2 2939 3405 26739865 26740331 6.870000e-152 547.0
23 TraesCS5D01G471600 chr6B 87.143 280 36 0 1796 2075 645377062 645376783 5.860000e-83 318.0
24 TraesCS5D01G471600 chr3A 89.506 324 25 7 40 358 308780572 308780253 5.660000e-108 401.0
25 TraesCS5D01G471600 chr3A 95.918 49 2 0 430 478 308780255 308780207 3.010000e-11 80.5
26 TraesCS5D01G471600 chr1B 94.872 234 12 0 534 767 668152152 668151919 2.060000e-97 366.0
27 TraesCS5D01G471600 chr1D 72.530 415 114 0 2983 3397 413794889 413795303 6.330000e-28 135.0
28 TraesCS5D01G471600 chr7D 72.530 415 113 1 2983 3397 579357027 579356614 2.280000e-27 134.0
29 TraesCS5D01G471600 chrUn 83.486 109 17 1 1960 2067 112300869 112300761 2.310000e-17 100.0
30 TraesCS5D01G471600 chr1A 87.143 70 9 0 2636 2705 558491715 558491646 3.010000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G471600 chr5D 512420092 512423728 3636 False 6717.0 6717 100.000000 1 3637 1 chr5D.!!$F1 3636
1 TraesCS5D01G471600 chr6D 379328624 379331751 3127 True 5206.0 5206 96.842000 534 3637 1 chr6D.!!$R1 3103
2 TraesCS5D01G471600 chr7A 83257307 83259262 1955 True 2961.0 2961 94.037000 1686 3637 1 chr7A.!!$R1 1951
3 TraesCS5D01G471600 chr7A 611966848 611968210 1362 True 1234.0 1234 83.345000 1796 3149 1 chr7A.!!$R2 1353
4 TraesCS5D01G471600 chr7A 83267567 83270871 3304 True 764.5 1299 92.923500 534 1690 2 chr7A.!!$R3 1156
5 TraesCS5D01G471600 chr7B 612898479 612900300 1821 True 2750.0 2750 94.063000 593 2403 1 chr7B.!!$R1 1810
6 TraesCS5D01G471600 chr2B 747858995 747861925 2930 False 1728.0 2615 95.702000 533 2680 2 chr2B.!!$F1 2147
7 TraesCS5D01G471600 chr5B 677706756 677712042 5286 True 1084.0 2508 89.243333 551 3637 3 chr5B.!!$R2 3086
8 TraesCS5D01G471600 chr3B 65277236 65278871 1635 False 1565.0 1565 84.262000 1792 3410 1 chr3B.!!$F1 1618
9 TraesCS5D01G471600 chr3D 407493407 407494780 1373 False 1280.0 1280 83.795000 1796 3176 1 chr3D.!!$F1 1380
10 TraesCS5D01G471600 chr2D 627148214 627149216 1002 True 874.0 1005 98.166500 532 3637 2 chr2D.!!$R1 3105

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
222 223 0.030235 GCGTGGCGGTTTCTTTCTTT 59.970 50.0 0.0 0.0 0.00 2.52 F
939 5514 0.389948 GACCAAGATCCAAGCGACGT 60.390 55.0 0.0 0.0 0.00 4.34 F
2172 6794 0.322997 CCATTGGCAGGGTAAACCGA 60.323 55.0 0.0 0.0 46.96 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1615 6226 0.040067 GCCACAACGAAAAGAGCCAG 60.040 55.000 0.00 0.00 0.00 4.85 R
2362 7743 2.225019 ACATTGTTTTCTCTCAGCTGCG 59.775 45.455 9.47 2.08 0.00 5.18 R
3348 8763 3.695060 TCAGAGTCCCTATCGAACTGAAC 59.305 47.826 0.00 0.00 31.51 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.822594 GCATATGTTGGTTGAACGTGA 57.177 42.857 4.29 0.00 37.38 4.35
21 22 4.153958 GCATATGTTGGTTGAACGTGAA 57.846 40.909 4.29 0.00 37.38 3.18
22 23 4.732784 GCATATGTTGGTTGAACGTGAAT 58.267 39.130 4.29 0.00 37.38 2.57
23 24 5.160641 GCATATGTTGGTTGAACGTGAATT 58.839 37.500 4.29 0.00 37.38 2.17
24 25 5.633182 GCATATGTTGGTTGAACGTGAATTT 59.367 36.000 4.29 0.00 37.38 1.82
25 26 6.183359 GCATATGTTGGTTGAACGTGAATTTC 60.183 38.462 4.29 0.00 37.38 2.17
26 27 4.703645 TGTTGGTTGAACGTGAATTTCA 57.296 36.364 0.00 0.00 37.38 2.69
27 28 5.060662 TGTTGGTTGAACGTGAATTTCAA 57.939 34.783 0.00 0.00 39.99 2.69
28 29 5.470368 TGTTGGTTGAACGTGAATTTCAAA 58.530 33.333 0.00 0.00 42.98 2.69
29 30 5.574830 TGTTGGTTGAACGTGAATTTCAAAG 59.425 36.000 0.00 1.41 42.98 2.77
30 31 4.109050 TGGTTGAACGTGAATTTCAAAGC 58.891 39.130 0.00 2.28 42.98 3.51
31 32 3.179599 GGTTGAACGTGAATTTCAAAGCG 59.820 43.478 0.00 3.66 42.98 4.68
32 33 3.953874 TGAACGTGAATTTCAAAGCGA 57.046 38.095 12.97 0.00 29.89 4.93
33 34 3.613563 TGAACGTGAATTTCAAAGCGAC 58.386 40.909 12.97 8.12 29.89 5.19
34 35 2.294479 ACGTGAATTTCAAAGCGACG 57.706 45.000 12.97 8.53 0.00 5.12
35 36 1.595794 ACGTGAATTTCAAAGCGACGT 59.404 42.857 12.97 9.07 0.00 4.34
36 37 1.962547 CGTGAATTTCAAAGCGACGTG 59.037 47.619 0.00 0.00 0.00 4.49
37 38 2.348125 CGTGAATTTCAAAGCGACGTGA 60.348 45.455 0.00 0.00 0.00 4.35
38 39 3.218398 GTGAATTTCAAAGCGACGTGAG 58.782 45.455 0.00 0.00 0.00 3.51
39 40 2.223144 TGAATTTCAAAGCGACGTGAGG 59.777 45.455 0.00 0.00 0.00 3.86
40 41 1.878953 ATTTCAAAGCGACGTGAGGT 58.121 45.000 0.00 0.00 0.00 3.85
41 42 0.934496 TTTCAAAGCGACGTGAGGTG 59.066 50.000 0.00 0.00 0.00 4.00
42 43 0.103390 TTCAAAGCGACGTGAGGTGA 59.897 50.000 0.00 0.00 0.00 4.02
43 44 0.596600 TCAAAGCGACGTGAGGTGAC 60.597 55.000 0.00 0.00 0.00 3.67
45 46 0.956633 AAAGCGACGTGAGGTGACTA 59.043 50.000 0.00 0.00 44.43 2.59
46 47 1.174783 AAGCGACGTGAGGTGACTAT 58.825 50.000 0.00 0.00 44.43 2.12
47 48 2.034104 AGCGACGTGAGGTGACTATA 57.966 50.000 0.00 0.00 44.43 1.31
48 49 2.573369 AGCGACGTGAGGTGACTATAT 58.427 47.619 0.00 0.00 44.43 0.86
49 50 2.290916 AGCGACGTGAGGTGACTATATG 59.709 50.000 0.00 0.00 44.43 1.78
50 51 2.604855 GCGACGTGAGGTGACTATATGG 60.605 54.545 0.00 0.00 44.43 2.74
51 52 2.031069 CGACGTGAGGTGACTATATGGG 60.031 54.545 0.00 0.00 44.43 4.00
52 53 2.296471 GACGTGAGGTGACTATATGGGG 59.704 54.545 0.00 0.00 44.43 4.96
53 54 2.317040 CGTGAGGTGACTATATGGGGT 58.683 52.381 0.00 0.00 44.43 4.95
54 55 2.035961 CGTGAGGTGACTATATGGGGTG 59.964 54.545 0.00 0.00 44.43 4.61
55 56 2.368875 GTGAGGTGACTATATGGGGTGG 59.631 54.545 0.00 0.00 44.43 4.61
56 57 1.348036 GAGGTGACTATATGGGGTGGC 59.652 57.143 0.00 0.00 44.43 5.01
57 58 0.400594 GGTGACTATATGGGGTGGCC 59.599 60.000 0.00 0.00 0.00 5.36
58 59 1.136828 GTGACTATATGGGGTGGCCA 58.863 55.000 0.00 0.00 0.00 5.36
59 60 1.136828 TGACTATATGGGGTGGCCAC 58.863 55.000 28.57 28.57 0.00 5.01
60 61 1.136828 GACTATATGGGGTGGCCACA 58.863 55.000 35.78 17.74 43.15 4.17
65 66 3.516512 TGGGGTGGCCACATGGTT 61.517 61.111 35.78 0.00 28.45 3.67
66 67 2.163592 TGGGGTGGCCACATGGTTA 61.164 57.895 35.78 13.57 28.45 2.85
67 68 1.309688 GGGGTGGCCACATGGTTAT 59.690 57.895 35.78 0.00 37.57 1.89
68 69 0.553819 GGGGTGGCCACATGGTTATA 59.446 55.000 35.78 0.00 37.57 0.98
69 70 1.478654 GGGGTGGCCACATGGTTATAG 60.479 57.143 35.78 0.00 37.57 1.31
70 71 1.318576 GGTGGCCACATGGTTATAGC 58.681 55.000 35.78 11.80 37.57 2.97
71 72 1.409521 GGTGGCCACATGGTTATAGCA 60.410 52.381 35.78 0.00 37.57 3.49
72 73 2.586425 GTGGCCACATGGTTATAGCAT 58.414 47.619 31.23 0.00 36.65 3.79
83 84 7.703298 CATGGTTATAGCATGGACAATTTTG 57.297 36.000 10.22 0.00 46.94 2.44
84 85 7.490840 CATGGTTATAGCATGGACAATTTTGA 58.509 34.615 10.22 0.00 46.94 2.69
85 86 7.658525 TGGTTATAGCATGGACAATTTTGAT 57.341 32.000 0.00 0.00 0.00 2.57
86 87 8.076910 TGGTTATAGCATGGACAATTTTGATT 57.923 30.769 0.00 0.00 0.00 2.57
87 88 8.538701 TGGTTATAGCATGGACAATTTTGATTT 58.461 29.630 0.00 0.00 0.00 2.17
88 89 9.382275 GGTTATAGCATGGACAATTTTGATTTT 57.618 29.630 0.00 0.00 0.00 1.82
91 92 8.851541 ATAGCATGGACAATTTTGATTTTTGT 57.148 26.923 0.00 0.00 36.34 2.83
92 93 7.571080 AGCATGGACAATTTTGATTTTTGTT 57.429 28.000 0.00 0.00 33.92 2.83
93 94 7.641760 AGCATGGACAATTTTGATTTTTGTTC 58.358 30.769 0.00 0.00 33.92 3.18
94 95 7.499895 AGCATGGACAATTTTGATTTTTGTTCT 59.500 29.630 0.00 0.00 33.92 3.01
95 96 8.130469 GCATGGACAATTTTGATTTTTGTTCTT 58.870 29.630 0.00 0.00 33.92 2.52
99 100 9.502145 GGACAATTTTGATTTTTGTTCTTTTCC 57.498 29.630 0.00 0.00 33.92 3.13
100 101 9.209297 GACAATTTTGATTTTTGTTCTTTTCCG 57.791 29.630 0.00 0.00 33.92 4.30
101 102 8.726068 ACAATTTTGATTTTTGTTCTTTTCCGT 58.274 25.926 0.00 0.00 29.60 4.69
102 103 8.997960 CAATTTTGATTTTTGTTCTTTTCCGTG 58.002 29.630 0.00 0.00 0.00 4.94
103 104 5.710613 TTGATTTTTGTTCTTTTCCGTGC 57.289 34.783 0.00 0.00 0.00 5.34
104 105 5.004922 TGATTTTTGTTCTTTTCCGTGCT 57.995 34.783 0.00 0.00 0.00 4.40
105 106 6.137794 TGATTTTTGTTCTTTTCCGTGCTA 57.862 33.333 0.00 0.00 0.00 3.49
106 107 5.974751 TGATTTTTGTTCTTTTCCGTGCTAC 59.025 36.000 0.00 0.00 0.00 3.58
107 108 5.570234 TTTTTGTTCTTTTCCGTGCTACT 57.430 34.783 0.00 0.00 0.00 2.57
108 109 4.545823 TTTGTTCTTTTCCGTGCTACTG 57.454 40.909 0.00 0.00 0.00 2.74
109 110 2.489971 TGTTCTTTTCCGTGCTACTGG 58.510 47.619 0.00 0.00 0.00 4.00
110 111 2.158871 TGTTCTTTTCCGTGCTACTGGT 60.159 45.455 0.00 0.00 0.00 4.00
111 112 2.876550 GTTCTTTTCCGTGCTACTGGTT 59.123 45.455 0.00 0.00 0.00 3.67
112 113 4.060205 GTTCTTTTCCGTGCTACTGGTTA 58.940 43.478 0.00 0.00 0.00 2.85
113 114 4.339872 TCTTTTCCGTGCTACTGGTTAA 57.660 40.909 0.00 0.00 0.00 2.01
114 115 4.312443 TCTTTTCCGTGCTACTGGTTAAG 58.688 43.478 0.00 0.00 0.00 1.85
115 116 4.039488 TCTTTTCCGTGCTACTGGTTAAGA 59.961 41.667 0.00 0.00 0.00 2.10
116 117 3.587797 TTCCGTGCTACTGGTTAAGAG 57.412 47.619 0.00 0.00 0.00 2.85
117 118 2.799017 TCCGTGCTACTGGTTAAGAGA 58.201 47.619 0.00 0.00 0.00 3.10
118 119 3.362706 TCCGTGCTACTGGTTAAGAGAT 58.637 45.455 0.00 0.00 0.00 2.75
119 120 3.767673 TCCGTGCTACTGGTTAAGAGATT 59.232 43.478 0.00 0.00 0.00 2.40
120 121 4.951715 TCCGTGCTACTGGTTAAGAGATTA 59.048 41.667 0.00 0.00 0.00 1.75
121 122 5.597182 TCCGTGCTACTGGTTAAGAGATTAT 59.403 40.000 0.00 0.00 0.00 1.28
122 123 6.774170 TCCGTGCTACTGGTTAAGAGATTATA 59.226 38.462 0.00 0.00 0.00 0.98
123 124 7.450634 TCCGTGCTACTGGTTAAGAGATTATAT 59.549 37.037 0.00 0.00 0.00 0.86
124 125 7.542477 CCGTGCTACTGGTTAAGAGATTATATG 59.458 40.741 0.00 0.00 0.00 1.78
125 126 7.542477 CGTGCTACTGGTTAAGAGATTATATGG 59.458 40.741 0.00 0.00 0.00 2.74
126 127 8.368668 GTGCTACTGGTTAAGAGATTATATGGT 58.631 37.037 0.00 0.00 0.00 3.55
127 128 8.934697 TGCTACTGGTTAAGAGATTATATGGTT 58.065 33.333 0.00 0.00 0.00 3.67
128 129 9.209175 GCTACTGGTTAAGAGATTATATGGTTG 57.791 37.037 0.00 0.00 0.00 3.77
134 135 8.989980 GGTTAAGAGATTATATGGTTGTAGTGC 58.010 37.037 0.00 0.00 0.00 4.40
135 136 9.542462 GTTAAGAGATTATATGGTTGTAGTGCA 57.458 33.333 0.00 0.00 0.00 4.57
136 137 9.764363 TTAAGAGATTATATGGTTGTAGTGCAG 57.236 33.333 0.00 0.00 0.00 4.41
137 138 7.366847 AGAGATTATATGGTTGTAGTGCAGT 57.633 36.000 0.00 0.00 0.00 4.40
138 139 7.796054 AGAGATTATATGGTTGTAGTGCAGTT 58.204 34.615 0.00 0.00 0.00 3.16
139 140 8.267894 AGAGATTATATGGTTGTAGTGCAGTTT 58.732 33.333 0.00 0.00 0.00 2.66
140 141 8.807948 AGATTATATGGTTGTAGTGCAGTTTT 57.192 30.769 0.00 0.00 0.00 2.43
141 142 9.899661 AGATTATATGGTTGTAGTGCAGTTTTA 57.100 29.630 0.00 0.00 0.00 1.52
143 144 9.681062 ATTATATGGTTGTAGTGCAGTTTTAGT 57.319 29.630 0.00 0.00 0.00 2.24
144 145 7.996098 ATATGGTTGTAGTGCAGTTTTAGTT 57.004 32.000 0.00 0.00 0.00 2.24
145 146 5.744666 TGGTTGTAGTGCAGTTTTAGTTC 57.255 39.130 0.00 0.00 0.00 3.01
146 147 5.433526 TGGTTGTAGTGCAGTTTTAGTTCT 58.566 37.500 0.00 0.00 0.00 3.01
147 148 5.883673 TGGTTGTAGTGCAGTTTTAGTTCTT 59.116 36.000 0.00 0.00 0.00 2.52
148 149 6.037830 TGGTTGTAGTGCAGTTTTAGTTCTTC 59.962 38.462 0.00 0.00 0.00 2.87
149 150 6.260271 GGTTGTAGTGCAGTTTTAGTTCTTCT 59.740 38.462 0.00 0.00 0.00 2.85
150 151 7.201705 GGTTGTAGTGCAGTTTTAGTTCTTCTT 60.202 37.037 0.00 0.00 0.00 2.52
151 152 7.859325 TGTAGTGCAGTTTTAGTTCTTCTTT 57.141 32.000 0.00 0.00 0.00 2.52
152 153 8.276252 TGTAGTGCAGTTTTAGTTCTTCTTTT 57.724 30.769 0.00 0.00 0.00 2.27
153 154 8.395633 TGTAGTGCAGTTTTAGTTCTTCTTTTC 58.604 33.333 0.00 0.00 0.00 2.29
154 155 7.631717 AGTGCAGTTTTAGTTCTTCTTTTCT 57.368 32.000 0.00 0.00 0.00 2.52
155 156 8.056407 AGTGCAGTTTTAGTTCTTCTTTTCTT 57.944 30.769 0.00 0.00 0.00 2.52
156 157 8.184848 AGTGCAGTTTTAGTTCTTCTTTTCTTC 58.815 33.333 0.00 0.00 0.00 2.87
157 158 8.184848 GTGCAGTTTTAGTTCTTCTTTTCTTCT 58.815 33.333 0.00 0.00 0.00 2.85
158 159 8.739972 TGCAGTTTTAGTTCTTCTTTTCTTCTT 58.260 29.630 0.00 0.00 0.00 2.52
167 168 9.688592 AGTTCTTCTTTTCTTCTTATTTGCATG 57.311 29.630 0.00 0.00 0.00 4.06
168 169 8.430828 GTTCTTCTTTTCTTCTTATTTGCATGC 58.569 33.333 11.82 11.82 0.00 4.06
169 170 6.803320 TCTTCTTTTCTTCTTATTTGCATGCG 59.197 34.615 14.09 0.00 0.00 4.73
170 171 6.012658 TCTTTTCTTCTTATTTGCATGCGT 57.987 33.333 14.09 4.18 0.00 5.24
171 172 7.139896 TCTTTTCTTCTTATTTGCATGCGTA 57.860 32.000 14.09 3.31 0.00 4.42
172 173 7.021196 TCTTTTCTTCTTATTTGCATGCGTAC 58.979 34.615 14.09 0.00 0.00 3.67
173 174 6.494893 TTTCTTCTTATTTGCATGCGTACT 57.505 33.333 14.09 0.40 0.00 2.73
174 175 7.603963 TTTCTTCTTATTTGCATGCGTACTA 57.396 32.000 14.09 0.00 0.00 1.82
175 176 7.603963 TTCTTCTTATTTGCATGCGTACTAA 57.396 32.000 14.09 7.59 0.00 2.24
176 177 7.786178 TCTTCTTATTTGCATGCGTACTAAT 57.214 32.000 14.09 9.59 0.00 1.73
177 178 7.630026 TCTTCTTATTTGCATGCGTACTAATG 58.370 34.615 14.09 0.00 0.00 1.90
178 179 7.494298 TCTTCTTATTTGCATGCGTACTAATGA 59.506 33.333 14.09 1.84 0.00 2.57
179 180 7.546778 TCTTATTTGCATGCGTACTAATGAA 57.453 32.000 14.09 0.00 0.00 2.57
180 181 7.630026 TCTTATTTGCATGCGTACTAATGAAG 58.370 34.615 14.09 7.73 0.00 3.02
181 182 7.494298 TCTTATTTGCATGCGTACTAATGAAGA 59.506 33.333 14.09 9.69 0.00 2.87
182 183 5.469373 TTTGCATGCGTACTAATGAAGAG 57.531 39.130 14.09 0.00 0.00 2.85
183 184 4.385358 TGCATGCGTACTAATGAAGAGA 57.615 40.909 14.09 0.00 0.00 3.10
184 185 4.948847 TGCATGCGTACTAATGAAGAGAT 58.051 39.130 14.09 0.00 0.00 2.75
185 186 4.984785 TGCATGCGTACTAATGAAGAGATC 59.015 41.667 14.09 0.00 0.00 2.75
186 187 5.221322 TGCATGCGTACTAATGAAGAGATCT 60.221 40.000 14.09 0.00 0.00 2.75
187 188 5.694006 GCATGCGTACTAATGAAGAGATCTT 59.306 40.000 0.00 0.00 39.23 2.40
188 189 6.201806 GCATGCGTACTAATGAAGAGATCTTT 59.798 38.462 0.00 0.00 36.11 2.52
189 190 7.254590 GCATGCGTACTAATGAAGAGATCTTTT 60.255 37.037 0.00 0.00 36.11 2.27
190 191 7.757097 TGCGTACTAATGAAGAGATCTTTTC 57.243 36.000 17.05 17.05 36.11 2.29
191 192 7.548097 TGCGTACTAATGAAGAGATCTTTTCT 58.452 34.615 22.49 9.50 36.11 2.52
199 200 1.294857 GAGATCTTTTCTCCGGCTGC 58.705 55.000 0.00 0.00 44.46 5.25
200 201 0.908198 AGATCTTTTCTCCGGCTGCT 59.092 50.000 0.00 0.00 0.00 4.24
201 202 1.280421 AGATCTTTTCTCCGGCTGCTT 59.720 47.619 0.00 0.00 0.00 3.91
202 203 2.087646 GATCTTTTCTCCGGCTGCTTT 58.912 47.619 0.00 0.00 0.00 3.51
203 204 1.238439 TCTTTTCTCCGGCTGCTTTG 58.762 50.000 0.00 0.00 0.00 2.77
204 205 0.387750 CTTTTCTCCGGCTGCTTTGC 60.388 55.000 0.00 0.00 0.00 3.68
205 206 2.128853 TTTTCTCCGGCTGCTTTGCG 62.129 55.000 0.00 0.00 0.00 4.85
206 207 3.825160 TTCTCCGGCTGCTTTGCGT 62.825 57.895 0.00 0.00 0.00 5.24
207 208 4.093952 CTCCGGCTGCTTTGCGTG 62.094 66.667 0.00 0.00 0.00 5.34
213 214 3.964875 CTGCTTTGCGTGGCGGTT 61.965 61.111 0.00 0.00 0.00 4.44
214 215 3.483235 CTGCTTTGCGTGGCGGTTT 62.483 57.895 0.00 0.00 0.00 3.27
215 216 2.729491 GCTTTGCGTGGCGGTTTC 60.729 61.111 0.00 0.00 0.00 2.78
216 217 3.030652 CTTTGCGTGGCGGTTTCT 58.969 55.556 0.00 0.00 0.00 2.52
217 218 1.358759 CTTTGCGTGGCGGTTTCTT 59.641 52.632 0.00 0.00 0.00 2.52
218 219 0.248866 CTTTGCGTGGCGGTTTCTTT 60.249 50.000 0.00 0.00 0.00 2.52
219 220 0.248702 TTTGCGTGGCGGTTTCTTTC 60.249 50.000 0.00 0.00 0.00 2.62
220 221 1.098712 TTGCGTGGCGGTTTCTTTCT 61.099 50.000 0.00 0.00 0.00 2.52
221 222 1.098712 TGCGTGGCGGTTTCTTTCTT 61.099 50.000 0.00 0.00 0.00 2.52
222 223 0.030235 GCGTGGCGGTTTCTTTCTTT 59.970 50.000 0.00 0.00 0.00 2.52
223 224 1.535226 GCGTGGCGGTTTCTTTCTTTT 60.535 47.619 0.00 0.00 0.00 2.27
224 225 2.804647 CGTGGCGGTTTCTTTCTTTTT 58.195 42.857 0.00 0.00 0.00 1.94
247 248 2.247557 GCGCTCGCATGCATAGTG 59.752 61.111 19.57 20.25 41.49 2.74
248 249 2.239812 GCGCTCGCATGCATAGTGA 61.240 57.895 26.37 12.18 41.49 3.41
249 250 1.563435 GCGCTCGCATGCATAGTGAT 61.563 55.000 26.37 0.00 41.49 3.06
250 251 1.701704 CGCTCGCATGCATAGTGATA 58.298 50.000 19.57 0.00 0.00 2.15
251 252 2.061028 CGCTCGCATGCATAGTGATAA 58.939 47.619 19.57 0.00 0.00 1.75
252 253 2.476241 CGCTCGCATGCATAGTGATAAA 59.524 45.455 19.57 0.00 0.00 1.40
253 254 3.422732 CGCTCGCATGCATAGTGATAAAG 60.423 47.826 19.57 0.00 0.00 1.85
254 255 3.120408 GCTCGCATGCATAGTGATAAAGG 60.120 47.826 19.57 0.00 0.00 3.11
255 256 3.402110 TCGCATGCATAGTGATAAAGGG 58.598 45.455 19.57 0.00 0.00 3.95
256 257 3.070878 TCGCATGCATAGTGATAAAGGGA 59.929 43.478 19.57 0.00 0.00 4.20
257 258 4.005650 CGCATGCATAGTGATAAAGGGAT 58.994 43.478 19.57 0.00 0.00 3.85
258 259 4.093998 CGCATGCATAGTGATAAAGGGATC 59.906 45.833 19.57 0.00 0.00 3.36
259 260 5.251764 GCATGCATAGTGATAAAGGGATCT 58.748 41.667 14.21 0.00 0.00 2.75
260 261 5.709164 GCATGCATAGTGATAAAGGGATCTT 59.291 40.000 14.21 0.00 34.07 2.40
261 262 6.208204 GCATGCATAGTGATAAAGGGATCTTT 59.792 38.462 14.21 0.00 44.57 2.52
262 263 7.255730 GCATGCATAGTGATAAAGGGATCTTTT 60.256 37.037 14.21 0.00 42.61 2.27
263 264 8.636213 CATGCATAGTGATAAAGGGATCTTTTT 58.364 33.333 0.00 0.00 42.61 1.94
284 285 7.552458 TTTTTCTTTTCTTTTCCCAAGCATC 57.448 32.000 0.00 0.00 0.00 3.91
285 286 4.871933 TCTTTTCTTTTCCCAAGCATCC 57.128 40.909 0.00 0.00 0.00 3.51
286 287 4.482990 TCTTTTCTTTTCCCAAGCATCCT 58.517 39.130 0.00 0.00 0.00 3.24
287 288 5.640147 TCTTTTCTTTTCCCAAGCATCCTA 58.360 37.500 0.00 0.00 0.00 2.94
288 289 6.256053 TCTTTTCTTTTCCCAAGCATCCTAT 58.744 36.000 0.00 0.00 0.00 2.57
289 290 7.410174 TCTTTTCTTTTCCCAAGCATCCTATA 58.590 34.615 0.00 0.00 0.00 1.31
290 291 8.061304 TCTTTTCTTTTCCCAAGCATCCTATAT 58.939 33.333 0.00 0.00 0.00 0.86
291 292 8.608185 TTTTCTTTTCCCAAGCATCCTATATT 57.392 30.769 0.00 0.00 0.00 1.28
292 293 7.823745 TTCTTTTCCCAAGCATCCTATATTC 57.176 36.000 0.00 0.00 0.00 1.75
293 294 7.154191 TCTTTTCCCAAGCATCCTATATTCT 57.846 36.000 0.00 0.00 0.00 2.40
294 295 7.227156 TCTTTTCCCAAGCATCCTATATTCTC 58.773 38.462 0.00 0.00 0.00 2.87
295 296 6.514012 TTTCCCAAGCATCCTATATTCTCA 57.486 37.500 0.00 0.00 0.00 3.27
296 297 6.514012 TTCCCAAGCATCCTATATTCTCAA 57.486 37.500 0.00 0.00 0.00 3.02
297 298 6.514012 TCCCAAGCATCCTATATTCTCAAA 57.486 37.500 0.00 0.00 0.00 2.69
298 299 6.299141 TCCCAAGCATCCTATATTCTCAAAC 58.701 40.000 0.00 0.00 0.00 2.93
299 300 6.064060 CCCAAGCATCCTATATTCTCAAACA 58.936 40.000 0.00 0.00 0.00 2.83
300 301 6.547141 CCCAAGCATCCTATATTCTCAAACAA 59.453 38.462 0.00 0.00 0.00 2.83
301 302 7.232127 CCCAAGCATCCTATATTCTCAAACAAT 59.768 37.037 0.00 0.00 0.00 2.71
302 303 9.288576 CCAAGCATCCTATATTCTCAAACAATA 57.711 33.333 0.00 0.00 0.00 1.90
314 315 7.843490 TTCTCAAACAATACTACTATGCCAC 57.157 36.000 0.00 0.00 0.00 5.01
315 316 6.040247 TCTCAAACAATACTACTATGCCACG 58.960 40.000 0.00 0.00 0.00 4.94
316 317 5.726397 TCAAACAATACTACTATGCCACGT 58.274 37.500 0.00 0.00 0.00 4.49
317 318 6.865411 TCAAACAATACTACTATGCCACGTA 58.135 36.000 0.00 0.00 0.00 3.57
318 319 7.494211 TCAAACAATACTACTATGCCACGTAT 58.506 34.615 0.00 0.00 0.00 3.06
319 320 8.631797 TCAAACAATACTACTATGCCACGTATA 58.368 33.333 0.00 0.00 0.00 1.47
320 321 8.697067 CAAACAATACTACTATGCCACGTATAC 58.303 37.037 0.00 0.00 0.00 1.47
321 322 6.917533 ACAATACTACTATGCCACGTATACC 58.082 40.000 0.00 0.00 0.00 2.73
322 323 6.491062 ACAATACTACTATGCCACGTATACCA 59.509 38.462 0.00 0.00 0.00 3.25
323 324 7.177921 ACAATACTACTATGCCACGTATACCAT 59.822 37.037 0.00 0.00 0.00 3.55
324 325 5.640189 ACTACTATGCCACGTATACCATC 57.360 43.478 0.00 0.00 0.00 3.51
325 326 5.074804 ACTACTATGCCACGTATACCATCA 58.925 41.667 0.00 0.00 0.00 3.07
326 327 5.715279 ACTACTATGCCACGTATACCATCAT 59.285 40.000 0.00 0.00 0.00 2.45
327 328 5.483685 ACTATGCCACGTATACCATCATT 57.516 39.130 0.00 0.00 0.00 2.57
328 329 5.479306 ACTATGCCACGTATACCATCATTC 58.521 41.667 0.00 0.00 0.00 2.67
329 330 4.623932 ATGCCACGTATACCATCATTCT 57.376 40.909 0.00 0.00 0.00 2.40
330 331 3.990092 TGCCACGTATACCATCATTCTC 58.010 45.455 0.00 0.00 0.00 2.87
331 332 3.641436 TGCCACGTATACCATCATTCTCT 59.359 43.478 0.00 0.00 0.00 3.10
332 333 4.238514 GCCACGTATACCATCATTCTCTC 58.761 47.826 0.00 0.00 0.00 3.20
333 334 4.476862 CCACGTATACCATCATTCTCTCG 58.523 47.826 0.00 0.00 0.00 4.04
334 335 3.914966 CACGTATACCATCATTCTCTCGC 59.085 47.826 0.00 0.00 0.00 5.03
335 336 3.568430 ACGTATACCATCATTCTCTCGCA 59.432 43.478 0.00 0.00 0.00 5.10
336 337 4.162072 CGTATACCATCATTCTCTCGCAG 58.838 47.826 0.00 0.00 0.00 5.18
337 338 2.515926 TACCATCATTCTCTCGCAGC 57.484 50.000 0.00 0.00 0.00 5.25
338 339 0.538584 ACCATCATTCTCTCGCAGCA 59.461 50.000 0.00 0.00 0.00 4.41
339 340 1.065926 ACCATCATTCTCTCGCAGCAA 60.066 47.619 0.00 0.00 0.00 3.91
340 341 2.219458 CCATCATTCTCTCGCAGCAAT 58.781 47.619 0.00 0.00 0.00 3.56
341 342 2.617308 CCATCATTCTCTCGCAGCAATT 59.383 45.455 0.00 0.00 0.00 2.32
342 343 3.066342 CCATCATTCTCTCGCAGCAATTT 59.934 43.478 0.00 0.00 0.00 1.82
343 344 4.439700 CCATCATTCTCTCGCAGCAATTTT 60.440 41.667 0.00 0.00 0.00 1.82
344 345 4.771590 TCATTCTCTCGCAGCAATTTTT 57.228 36.364 0.00 0.00 0.00 1.94
345 346 5.878332 TCATTCTCTCGCAGCAATTTTTA 57.122 34.783 0.00 0.00 0.00 1.52
346 347 6.252967 TCATTCTCTCGCAGCAATTTTTAA 57.747 33.333 0.00 0.00 0.00 1.52
347 348 6.317088 TCATTCTCTCGCAGCAATTTTTAAG 58.683 36.000 0.00 0.00 0.00 1.85
348 349 5.940192 TTCTCTCGCAGCAATTTTTAAGA 57.060 34.783 0.00 0.00 0.00 2.10
349 350 6.500684 TTCTCTCGCAGCAATTTTTAAGAT 57.499 33.333 0.00 0.00 0.00 2.40
350 351 6.500684 TCTCTCGCAGCAATTTTTAAGATT 57.499 33.333 0.00 0.00 0.00 2.40
351 352 7.609760 TCTCTCGCAGCAATTTTTAAGATTA 57.390 32.000 0.00 0.00 0.00 1.75
352 353 8.039603 TCTCTCGCAGCAATTTTTAAGATTAA 57.960 30.769 0.00 0.00 0.00 1.40
353 354 7.962918 TCTCTCGCAGCAATTTTTAAGATTAAC 59.037 33.333 0.00 0.00 0.00 2.01
354 355 7.589395 TCTCGCAGCAATTTTTAAGATTAACA 58.411 30.769 0.00 0.00 0.00 2.41
355 356 8.243426 TCTCGCAGCAATTTTTAAGATTAACAT 58.757 29.630 0.00 0.00 0.00 2.71
356 357 8.755696 TCGCAGCAATTTTTAAGATTAACATT 57.244 26.923 0.00 0.00 0.00 2.71
357 358 9.847706 TCGCAGCAATTTTTAAGATTAACATTA 57.152 25.926 0.00 0.00 0.00 1.90
358 359 9.885743 CGCAGCAATTTTTAAGATTAACATTAC 57.114 29.630 0.00 0.00 0.00 1.89
372 373 9.823647 AGATTAACATTACCTCATTCAGTACAG 57.176 33.333 0.00 0.00 0.00 2.74
373 374 9.817809 GATTAACATTACCTCATTCAGTACAGA 57.182 33.333 0.00 0.00 0.00 3.41
374 375 8.997621 TTAACATTACCTCATTCAGTACAGAC 57.002 34.615 0.00 0.00 0.00 3.51
375 376 6.605471 ACATTACCTCATTCAGTACAGACA 57.395 37.500 0.00 0.00 0.00 3.41
376 377 6.398918 ACATTACCTCATTCAGTACAGACAC 58.601 40.000 0.00 0.00 0.00 3.67
377 378 6.211584 ACATTACCTCATTCAGTACAGACACT 59.788 38.462 0.00 0.00 0.00 3.55
378 379 7.396339 ACATTACCTCATTCAGTACAGACACTA 59.604 37.037 0.00 0.00 0.00 2.74
379 380 5.646577 ACCTCATTCAGTACAGACACTAC 57.353 43.478 0.00 0.00 0.00 2.73
380 381 5.077564 ACCTCATTCAGTACAGACACTACA 58.922 41.667 0.00 0.00 0.00 2.74
381 382 5.047943 ACCTCATTCAGTACAGACACTACAC 60.048 44.000 0.00 0.00 0.00 2.90
382 383 5.184096 CCTCATTCAGTACAGACACTACACT 59.816 44.000 0.00 0.00 0.00 3.55
383 384 6.294787 CCTCATTCAGTACAGACACTACACTT 60.295 42.308 0.00 0.00 0.00 3.16
384 385 6.447162 TCATTCAGTACAGACACTACACTTG 58.553 40.000 0.00 0.00 0.00 3.16
385 386 6.264518 TCATTCAGTACAGACACTACACTTGA 59.735 38.462 0.00 0.00 0.00 3.02
386 387 5.434352 TCAGTACAGACACTACACTTGAC 57.566 43.478 0.00 0.00 0.00 3.18
387 388 5.131067 TCAGTACAGACACTACACTTGACT 58.869 41.667 0.00 0.00 0.00 3.41
388 389 5.238868 TCAGTACAGACACTACACTTGACTC 59.761 44.000 0.00 0.00 0.00 3.36
389 390 4.519730 AGTACAGACACTACACTTGACTCC 59.480 45.833 0.00 0.00 0.00 3.85
390 391 3.567397 ACAGACACTACACTTGACTCCT 58.433 45.455 0.00 0.00 0.00 3.69
391 392 4.726583 ACAGACACTACACTTGACTCCTA 58.273 43.478 0.00 0.00 0.00 2.94
392 393 4.762765 ACAGACACTACACTTGACTCCTAG 59.237 45.833 0.00 0.00 0.00 3.02
393 394 5.004448 CAGACACTACACTTGACTCCTAGA 58.996 45.833 0.00 0.00 0.00 2.43
394 395 5.650266 CAGACACTACACTTGACTCCTAGAT 59.350 44.000 0.00 0.00 0.00 1.98
395 396 6.151985 CAGACACTACACTTGACTCCTAGATT 59.848 42.308 0.00 0.00 0.00 2.40
396 397 6.722129 AGACACTACACTTGACTCCTAGATTT 59.278 38.462 0.00 0.00 0.00 2.17
397 398 7.889073 AGACACTACACTTGACTCCTAGATTTA 59.111 37.037 0.00 0.00 0.00 1.40
398 399 8.596781 ACACTACACTTGACTCCTAGATTTAT 57.403 34.615 0.00 0.00 0.00 1.40
399 400 9.696572 ACACTACACTTGACTCCTAGATTTATA 57.303 33.333 0.00 0.00 0.00 0.98
401 402 8.852135 ACTACACTTGACTCCTAGATTTATAGC 58.148 37.037 0.00 0.00 0.00 2.97
402 403 6.740110 ACACTTGACTCCTAGATTTATAGCG 58.260 40.000 0.00 0.00 0.00 4.26
403 404 6.321690 ACACTTGACTCCTAGATTTATAGCGT 59.678 38.462 0.00 0.00 0.00 5.07
404 405 7.501559 ACACTTGACTCCTAGATTTATAGCGTA 59.498 37.037 0.00 0.00 0.00 4.42
405 406 8.350722 CACTTGACTCCTAGATTTATAGCGTAA 58.649 37.037 0.00 0.00 0.00 3.18
406 407 8.910944 ACTTGACTCCTAGATTTATAGCGTAAA 58.089 33.333 0.00 0.82 0.00 2.01
407 408 9.745880 CTTGACTCCTAGATTTATAGCGTAAAA 57.254 33.333 0.00 0.00 0.00 1.52
433 434 8.510132 AAACCATTTTTAACGTGTACATTAGC 57.490 30.769 0.00 0.00 0.00 3.09
434 435 6.308675 ACCATTTTTAACGTGTACATTAGCG 58.691 36.000 0.00 0.00 0.00 4.26
435 436 6.073112 ACCATTTTTAACGTGTACATTAGCGT 60.073 34.615 0.00 0.37 39.37 5.07
436 437 6.247582 CCATTTTTAACGTGTACATTAGCGTG 59.752 38.462 9.64 0.00 37.64 5.34
437 438 6.522233 TTTTTAACGTGTACATTAGCGTGA 57.478 33.333 9.64 0.26 37.64 4.35
438 439 6.522233 TTTTAACGTGTACATTAGCGTGAA 57.478 33.333 9.64 6.27 37.64 3.18
439 440 6.709145 TTTAACGTGTACATTAGCGTGAAT 57.291 33.333 9.64 0.00 37.64 2.57
440 441 6.709145 TTAACGTGTACATTAGCGTGAATT 57.291 33.333 9.64 0.00 37.64 2.17
441 442 4.577687 ACGTGTACATTAGCGTGAATTG 57.422 40.909 8.28 0.00 36.16 2.32
442 443 3.181524 ACGTGTACATTAGCGTGAATTGC 60.182 43.478 8.28 0.00 36.16 3.56
443 444 3.680789 GTGTACATTAGCGTGAATTGCC 58.319 45.455 0.00 0.00 0.00 4.52
444 445 3.126171 GTGTACATTAGCGTGAATTGCCA 59.874 43.478 0.00 0.00 0.00 4.92
445 446 3.753797 TGTACATTAGCGTGAATTGCCAA 59.246 39.130 0.00 0.00 0.00 4.52
446 447 4.397730 TGTACATTAGCGTGAATTGCCAAT 59.602 37.500 0.00 0.00 0.00 3.16
447 448 3.772932 ACATTAGCGTGAATTGCCAATG 58.227 40.909 4.91 4.91 43.86 2.82
448 449 3.193267 ACATTAGCGTGAATTGCCAATGT 59.807 39.130 6.04 6.04 45.44 2.71
449 450 3.485947 TTAGCGTGAATTGCCAATGTC 57.514 42.857 0.00 0.00 0.00 3.06
450 451 1.538047 AGCGTGAATTGCCAATGTCT 58.462 45.000 0.00 0.00 0.00 3.41
451 452 1.200716 AGCGTGAATTGCCAATGTCTG 59.799 47.619 0.00 0.00 0.00 3.51
452 453 1.621107 CGTGAATTGCCAATGTCTGC 58.379 50.000 0.00 0.00 0.00 4.26
453 454 1.068402 CGTGAATTGCCAATGTCTGCA 60.068 47.619 0.00 0.00 35.27 4.41
454 455 2.416296 CGTGAATTGCCAATGTCTGCAT 60.416 45.455 0.00 0.00 37.33 3.96
455 456 2.927477 GTGAATTGCCAATGTCTGCATG 59.073 45.455 0.00 0.00 37.33 4.06
456 457 2.563620 TGAATTGCCAATGTCTGCATGT 59.436 40.909 0.00 0.00 37.33 3.21
457 458 3.007074 TGAATTGCCAATGTCTGCATGTT 59.993 39.130 0.00 0.00 37.33 2.71
458 459 4.220163 TGAATTGCCAATGTCTGCATGTTA 59.780 37.500 0.00 0.00 37.33 2.41
459 460 3.574284 TTGCCAATGTCTGCATGTTAC 57.426 42.857 0.00 0.00 37.33 2.50
460 461 2.512705 TGCCAATGTCTGCATGTTACA 58.487 42.857 0.00 0.00 35.15 2.41
461 462 2.488937 TGCCAATGTCTGCATGTTACAG 59.511 45.455 0.00 0.00 35.15 2.74
462 463 2.489329 GCCAATGTCTGCATGTTACAGT 59.511 45.455 0.00 0.00 36.50 3.55
463 464 3.057315 GCCAATGTCTGCATGTTACAGTT 60.057 43.478 0.00 0.00 36.50 3.16
464 465 4.559300 GCCAATGTCTGCATGTTACAGTTT 60.559 41.667 0.00 0.00 36.50 2.66
465 466 5.531634 CCAATGTCTGCATGTTACAGTTTT 58.468 37.500 0.00 0.00 36.50 2.43
466 467 5.984926 CCAATGTCTGCATGTTACAGTTTTT 59.015 36.000 0.00 0.00 36.50 1.94
489 490 5.512753 TGTTGAGCACAAATACAACATGT 57.487 34.783 0.00 0.00 44.50 3.21
490 491 5.280164 TGTTGAGCACAAATACAACATGTG 58.720 37.500 0.00 0.97 44.50 3.21
491 492 5.067023 TGTTGAGCACAAATACAACATGTGA 59.933 36.000 0.00 0.00 45.61 3.58
492 493 5.107109 TGAGCACAAATACAACATGTGAC 57.893 39.130 0.00 3.36 45.61 3.67
493 494 4.023279 TGAGCACAAATACAACATGTGACC 60.023 41.667 0.00 0.96 45.61 4.02
494 495 3.888323 AGCACAAATACAACATGTGACCA 59.112 39.130 0.00 0.00 45.61 4.02
495 496 4.340666 AGCACAAATACAACATGTGACCAA 59.659 37.500 0.00 0.00 45.61 3.67
496 497 5.010922 AGCACAAATACAACATGTGACCAAT 59.989 36.000 0.00 0.00 45.61 3.16
497 498 5.695816 GCACAAATACAACATGTGACCAATT 59.304 36.000 0.00 0.00 45.61 2.32
498 499 6.865726 GCACAAATACAACATGTGACCAATTA 59.134 34.615 0.00 0.00 45.61 1.40
499 500 7.383572 GCACAAATACAACATGTGACCAATTAA 59.616 33.333 0.00 0.00 45.61 1.40
500 501 8.914654 CACAAATACAACATGTGACCAATTAAG 58.085 33.333 0.00 0.00 45.61 1.85
501 502 8.637986 ACAAATACAACATGTGACCAATTAAGT 58.362 29.630 0.00 0.00 0.00 2.24
504 505 9.515226 AATACAACATGTGACCAATTAAGTAGT 57.485 29.630 0.00 0.00 0.00 2.73
506 507 8.547967 ACAACATGTGACCAATTAAGTAGTAG 57.452 34.615 0.00 0.00 0.00 2.57
507 508 7.119262 ACAACATGTGACCAATTAAGTAGTAGC 59.881 37.037 0.00 0.00 0.00 3.58
508 509 6.947464 ACATGTGACCAATTAAGTAGTAGCT 58.053 36.000 0.00 0.00 0.00 3.32
509 510 6.818644 ACATGTGACCAATTAAGTAGTAGCTG 59.181 38.462 0.00 0.00 0.00 4.24
510 511 5.730550 TGTGACCAATTAAGTAGTAGCTGG 58.269 41.667 0.00 0.00 0.00 4.85
511 512 5.116882 GTGACCAATTAAGTAGTAGCTGGG 58.883 45.833 0.00 0.00 0.00 4.45
512 513 4.127907 GACCAATTAAGTAGTAGCTGGGC 58.872 47.826 0.00 0.00 0.00 5.36
513 514 3.780850 ACCAATTAAGTAGTAGCTGGGCT 59.219 43.478 0.00 0.00 43.41 5.19
514 515 4.966805 ACCAATTAAGTAGTAGCTGGGCTA 59.033 41.667 0.00 0.00 40.44 3.93
548 549 2.218603 GAGTGGGAAGCAACTTTTCGA 58.781 47.619 0.00 0.00 0.00 3.71
833 5408 7.340232 TCAGCTATTCATTAATCAAAAGCAGGT 59.660 33.333 10.39 1.55 0.00 4.00
939 5514 0.389948 GACCAAGATCCAAGCGACGT 60.390 55.000 0.00 0.00 0.00 4.34
1112 5688 5.250200 TCCGCTTGTTTATTGGATGTAGTT 58.750 37.500 0.00 0.00 0.00 2.24
1118 5694 4.764308 TGTTTATTGGATGTAGTTGCTGCA 59.236 37.500 0.00 0.00 0.00 4.41
1230 5806 2.024319 GCATCTATCAGCGTCGCCC 61.024 63.158 14.86 0.00 0.00 6.13
1332 5908 1.610379 TGCTCAGAGGCTACCAGCA 60.610 57.895 9.12 9.12 44.75 4.41
1444 6046 7.916914 TGTCTAGTTCCTAAATTTTAGCCAC 57.083 36.000 10.16 8.60 0.00 5.01
1558 6169 7.476667 TGTTTTGGTGTGTTCAACTTATGTAG 58.523 34.615 0.00 0.00 31.63 2.74
1767 6378 3.907894 TTGATTTTCCAACTACGTGCC 57.092 42.857 0.00 0.00 0.00 5.01
1768 6379 2.156098 TGATTTTCCAACTACGTGCCC 58.844 47.619 0.00 0.00 0.00 5.36
1922 6533 0.541063 TAGTCAACCCAGCAGTCGGA 60.541 55.000 0.00 0.00 0.00 4.55
1940 6551 6.368791 CAGTCGGAACTTCATTTGATTCACTA 59.631 38.462 0.00 0.00 31.71 2.74
2067 6678 1.813753 GTATGTGGATGCGCGGTGT 60.814 57.895 8.83 0.00 0.00 4.16
2138 6760 4.888917 TCGAAACATGATTGGTACTGACA 58.111 39.130 0.00 0.00 0.00 3.58
2172 6794 0.322997 CCATTGGCAGGGTAAACCGA 60.323 55.000 0.00 0.00 46.96 4.69
2362 7743 7.701078 TGATCGCTACACTAAAGATCTTGTTAC 59.299 37.037 9.17 0.00 38.68 2.50
2520 7903 0.036388 TTCAGATGCCCGGAAGACAC 60.036 55.000 0.73 0.00 0.00 3.67
2634 8017 0.533491 TAACGGGCGCAGTGTAGAAT 59.467 50.000 10.83 0.00 0.00 2.40
2707 8090 7.149973 ACAAATCTATATGACATGCCATTTGC 58.850 34.615 0.00 0.00 34.67 3.68
2910 8323 9.217278 GTTAGAATGATGATCATGCTGTAAGAT 57.783 33.333 23.26 0.77 42.61 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.822594 TCACGTTCAACCAACATATGC 57.177 42.857 1.58 0.00 34.20 3.14
1 2 6.860539 TGAAATTCACGTTCAACCAACATATG 59.139 34.615 0.00 0.00 34.20 1.78
2 3 6.976088 TGAAATTCACGTTCAACCAACATAT 58.024 32.000 0.00 0.00 34.20 1.78
3 4 6.378710 TGAAATTCACGTTCAACCAACATA 57.621 33.333 0.00 0.00 34.20 2.29
4 5 5.255710 TGAAATTCACGTTCAACCAACAT 57.744 34.783 0.00 0.00 34.20 2.71
5 6 4.703645 TGAAATTCACGTTCAACCAACA 57.296 36.364 0.00 0.00 34.20 3.33
6 7 5.500131 GCTTTGAAATTCACGTTCAACCAAC 60.500 40.000 0.00 0.00 42.98 3.77
7 8 4.564769 GCTTTGAAATTCACGTTCAACCAA 59.435 37.500 0.00 0.00 42.98 3.67
8 9 4.109050 GCTTTGAAATTCACGTTCAACCA 58.891 39.130 0.00 0.00 42.98 3.67
9 10 3.179599 CGCTTTGAAATTCACGTTCAACC 59.820 43.478 0.00 0.00 42.98 3.77
10 11 4.032355 TCGCTTTGAAATTCACGTTCAAC 58.968 39.130 0.00 0.00 42.98 3.18
11 12 4.032355 GTCGCTTTGAAATTCACGTTCAA 58.968 39.130 0.00 0.00 41.91 2.69
12 13 3.613563 GTCGCTTTGAAATTCACGTTCA 58.386 40.909 0.00 0.00 33.21 3.18
13 14 2.645647 CGTCGCTTTGAAATTCACGTTC 59.354 45.455 0.00 0.00 0.00 3.95
14 15 2.031191 ACGTCGCTTTGAAATTCACGTT 59.969 40.909 0.00 0.00 0.00 3.99
15 16 1.595794 ACGTCGCTTTGAAATTCACGT 59.404 42.857 0.00 0.00 0.00 4.49
16 17 1.962547 CACGTCGCTTTGAAATTCACG 59.037 47.619 0.00 0.00 0.00 4.35
17 18 3.218398 CTCACGTCGCTTTGAAATTCAC 58.782 45.455 0.00 0.00 0.00 3.18
18 19 2.223144 CCTCACGTCGCTTTGAAATTCA 59.777 45.455 0.00 0.00 0.00 2.57
19 20 2.223377 ACCTCACGTCGCTTTGAAATTC 59.777 45.455 0.00 0.00 0.00 2.17
20 21 2.032030 CACCTCACGTCGCTTTGAAATT 60.032 45.455 0.00 0.00 0.00 1.82
21 22 1.531149 CACCTCACGTCGCTTTGAAAT 59.469 47.619 0.00 0.00 0.00 2.17
22 23 0.934496 CACCTCACGTCGCTTTGAAA 59.066 50.000 0.00 0.00 0.00 2.69
23 24 0.103390 TCACCTCACGTCGCTTTGAA 59.897 50.000 0.00 0.00 0.00 2.69
24 25 0.596600 GTCACCTCACGTCGCTTTGA 60.597 55.000 0.00 0.00 0.00 2.69
25 26 0.597637 AGTCACCTCACGTCGCTTTG 60.598 55.000 0.00 0.00 0.00 2.77
26 27 0.956633 TAGTCACCTCACGTCGCTTT 59.043 50.000 0.00 0.00 0.00 3.51
27 28 1.174783 ATAGTCACCTCACGTCGCTT 58.825 50.000 0.00 0.00 0.00 4.68
28 29 2.034104 TATAGTCACCTCACGTCGCT 57.966 50.000 0.00 0.00 0.00 4.93
29 30 2.604855 CCATATAGTCACCTCACGTCGC 60.605 54.545 0.00 0.00 0.00 5.19
30 31 2.031069 CCCATATAGTCACCTCACGTCG 60.031 54.545 0.00 0.00 0.00 5.12
31 32 2.296471 CCCCATATAGTCACCTCACGTC 59.704 54.545 0.00 0.00 0.00 4.34
32 33 2.317040 CCCCATATAGTCACCTCACGT 58.683 52.381 0.00 0.00 0.00 4.49
33 34 2.035961 CACCCCATATAGTCACCTCACG 59.964 54.545 0.00 0.00 0.00 4.35
34 35 2.368875 CCACCCCATATAGTCACCTCAC 59.631 54.545 0.00 0.00 0.00 3.51
35 36 2.689658 CCACCCCATATAGTCACCTCA 58.310 52.381 0.00 0.00 0.00 3.86
36 37 1.348036 GCCACCCCATATAGTCACCTC 59.652 57.143 0.00 0.00 0.00 3.85
37 38 1.435256 GCCACCCCATATAGTCACCT 58.565 55.000 0.00 0.00 0.00 4.00
38 39 0.400594 GGCCACCCCATATAGTCACC 59.599 60.000 0.00 0.00 0.00 4.02
39 40 1.136828 TGGCCACCCCATATAGTCAC 58.863 55.000 0.00 0.00 39.18 3.67
40 41 3.664869 TGGCCACCCCATATAGTCA 57.335 52.632 0.00 0.00 39.18 3.41
48 49 1.513975 ATAACCATGTGGCCACCCCA 61.514 55.000 32.62 15.55 42.79 4.96
49 50 0.553819 TATAACCATGTGGCCACCCC 59.446 55.000 32.62 9.38 39.32 4.95
50 51 1.981256 CTATAACCATGTGGCCACCC 58.019 55.000 32.62 10.22 39.32 4.61
51 52 1.318576 GCTATAACCATGTGGCCACC 58.681 55.000 32.62 15.42 39.32 4.61
52 53 2.051334 TGCTATAACCATGTGGCCAC 57.949 50.000 29.67 29.67 39.32 5.01
53 54 2.585330 CATGCTATAACCATGTGGCCA 58.415 47.619 0.00 0.00 39.32 5.36
54 55 1.888512 CCATGCTATAACCATGTGGCC 59.111 52.381 0.00 0.00 38.67 5.36
55 56 2.554032 GTCCATGCTATAACCATGTGGC 59.446 50.000 0.00 0.00 38.67 5.01
56 57 3.819368 TGTCCATGCTATAACCATGTGG 58.181 45.455 10.47 0.00 38.67 4.17
57 58 6.395426 AATTGTCCATGCTATAACCATGTG 57.605 37.500 10.47 4.75 38.67 3.21
58 59 7.123997 TCAAAATTGTCCATGCTATAACCATGT 59.876 33.333 10.47 0.00 38.67 3.21
59 60 7.490840 TCAAAATTGTCCATGCTATAACCATG 58.509 34.615 6.20 6.20 39.74 3.66
60 61 7.658525 TCAAAATTGTCCATGCTATAACCAT 57.341 32.000 0.00 0.00 0.00 3.55
61 62 7.658525 ATCAAAATTGTCCATGCTATAACCA 57.341 32.000 0.00 0.00 0.00 3.67
62 63 8.947055 AAATCAAAATTGTCCATGCTATAACC 57.053 30.769 0.00 0.00 0.00 2.85
65 66 9.941325 ACAAAAATCAAAATTGTCCATGCTATA 57.059 25.926 0.00 0.00 32.02 1.31
66 67 8.851541 ACAAAAATCAAAATTGTCCATGCTAT 57.148 26.923 0.00 0.00 32.02 2.97
67 68 8.674263 AACAAAAATCAAAATTGTCCATGCTA 57.326 26.923 0.00 0.00 36.33 3.49
68 69 7.499895 AGAACAAAAATCAAAATTGTCCATGCT 59.500 29.630 0.00 0.00 36.33 3.79
69 70 7.641760 AGAACAAAAATCAAAATTGTCCATGC 58.358 30.769 0.00 0.00 36.33 4.06
73 74 9.502145 GGAAAAGAACAAAAATCAAAATTGTCC 57.498 29.630 0.00 0.00 36.33 4.02
74 75 9.209297 CGGAAAAGAACAAAAATCAAAATTGTC 57.791 29.630 0.00 0.00 36.33 3.18
75 76 8.726068 ACGGAAAAGAACAAAAATCAAAATTGT 58.274 25.926 0.00 0.00 38.85 2.71
76 77 8.997960 CACGGAAAAGAACAAAAATCAAAATTG 58.002 29.630 0.00 0.00 0.00 2.32
77 78 7.696035 GCACGGAAAAGAACAAAAATCAAAATT 59.304 29.630 0.00 0.00 0.00 1.82
78 79 7.065683 AGCACGGAAAAGAACAAAAATCAAAAT 59.934 29.630 0.00 0.00 0.00 1.82
79 80 6.370166 AGCACGGAAAAGAACAAAAATCAAAA 59.630 30.769 0.00 0.00 0.00 2.44
80 81 5.872070 AGCACGGAAAAGAACAAAAATCAAA 59.128 32.000 0.00 0.00 0.00 2.69
81 82 5.415221 AGCACGGAAAAGAACAAAAATCAA 58.585 33.333 0.00 0.00 0.00 2.57
82 83 5.004922 AGCACGGAAAAGAACAAAAATCA 57.995 34.783 0.00 0.00 0.00 2.57
83 84 6.142320 CAGTAGCACGGAAAAGAACAAAAATC 59.858 38.462 0.00 0.00 0.00 2.17
84 85 5.977129 CAGTAGCACGGAAAAGAACAAAAAT 59.023 36.000 0.00 0.00 0.00 1.82
85 86 5.336744 CAGTAGCACGGAAAAGAACAAAAA 58.663 37.500 0.00 0.00 0.00 1.94
86 87 4.201970 CCAGTAGCACGGAAAAGAACAAAA 60.202 41.667 0.00 0.00 0.00 2.44
87 88 3.314080 CCAGTAGCACGGAAAAGAACAAA 59.686 43.478 0.00 0.00 0.00 2.83
88 89 2.875933 CCAGTAGCACGGAAAAGAACAA 59.124 45.455 0.00 0.00 0.00 2.83
89 90 2.158871 ACCAGTAGCACGGAAAAGAACA 60.159 45.455 0.00 0.00 0.00 3.18
90 91 2.490991 ACCAGTAGCACGGAAAAGAAC 58.509 47.619 0.00 0.00 0.00 3.01
91 92 2.922740 ACCAGTAGCACGGAAAAGAA 57.077 45.000 0.00 0.00 0.00 2.52
92 93 2.922740 AACCAGTAGCACGGAAAAGA 57.077 45.000 0.00 0.00 0.00 2.52
93 94 4.312443 TCTTAACCAGTAGCACGGAAAAG 58.688 43.478 0.00 0.00 0.00 2.27
94 95 4.039488 TCTCTTAACCAGTAGCACGGAAAA 59.961 41.667 0.00 0.00 0.00 2.29
95 96 3.575256 TCTCTTAACCAGTAGCACGGAAA 59.425 43.478 0.00 0.00 0.00 3.13
96 97 3.159472 TCTCTTAACCAGTAGCACGGAA 58.841 45.455 0.00 0.00 0.00 4.30
97 98 2.799017 TCTCTTAACCAGTAGCACGGA 58.201 47.619 0.00 0.00 0.00 4.69
98 99 3.802948 ATCTCTTAACCAGTAGCACGG 57.197 47.619 0.00 0.00 0.00 4.94
99 100 7.542477 CCATATAATCTCTTAACCAGTAGCACG 59.458 40.741 0.00 0.00 0.00 5.34
100 101 8.368668 ACCATATAATCTCTTAACCAGTAGCAC 58.631 37.037 0.00 0.00 0.00 4.40
101 102 8.492415 ACCATATAATCTCTTAACCAGTAGCA 57.508 34.615 0.00 0.00 0.00 3.49
102 103 9.209175 CAACCATATAATCTCTTAACCAGTAGC 57.791 37.037 0.00 0.00 0.00 3.58
108 109 8.989980 GCACTACAACCATATAATCTCTTAACC 58.010 37.037 0.00 0.00 0.00 2.85
109 110 9.542462 TGCACTACAACCATATAATCTCTTAAC 57.458 33.333 0.00 0.00 0.00 2.01
110 111 9.764363 CTGCACTACAACCATATAATCTCTTAA 57.236 33.333 0.00 0.00 0.00 1.85
111 112 8.924303 ACTGCACTACAACCATATAATCTCTTA 58.076 33.333 0.00 0.00 0.00 2.10
112 113 7.796054 ACTGCACTACAACCATATAATCTCTT 58.204 34.615 0.00 0.00 0.00 2.85
113 114 7.366847 ACTGCACTACAACCATATAATCTCT 57.633 36.000 0.00 0.00 0.00 3.10
114 115 8.438676 AAACTGCACTACAACCATATAATCTC 57.561 34.615 0.00 0.00 0.00 2.75
115 116 8.807948 AAAACTGCACTACAACCATATAATCT 57.192 30.769 0.00 0.00 0.00 2.40
117 118 9.681062 ACTAAAACTGCACTACAACCATATAAT 57.319 29.630 0.00 0.00 0.00 1.28
118 119 9.509956 AACTAAAACTGCACTACAACCATATAA 57.490 29.630 0.00 0.00 0.00 0.98
119 120 9.158233 GAACTAAAACTGCACTACAACCATATA 57.842 33.333 0.00 0.00 0.00 0.86
120 121 7.883311 AGAACTAAAACTGCACTACAACCATAT 59.117 33.333 0.00 0.00 0.00 1.78
121 122 7.221450 AGAACTAAAACTGCACTACAACCATA 58.779 34.615 0.00 0.00 0.00 2.74
122 123 6.062095 AGAACTAAAACTGCACTACAACCAT 58.938 36.000 0.00 0.00 0.00 3.55
123 124 5.433526 AGAACTAAAACTGCACTACAACCA 58.566 37.500 0.00 0.00 0.00 3.67
124 125 6.260271 AGAAGAACTAAAACTGCACTACAACC 59.740 38.462 0.00 0.00 0.00 3.77
125 126 7.247929 AGAAGAACTAAAACTGCACTACAAC 57.752 36.000 0.00 0.00 0.00 3.32
126 127 7.859325 AAGAAGAACTAAAACTGCACTACAA 57.141 32.000 0.00 0.00 0.00 2.41
127 128 7.859325 AAAGAAGAACTAAAACTGCACTACA 57.141 32.000 0.00 0.00 0.00 2.74
128 129 8.613482 AGAAAAGAAGAACTAAAACTGCACTAC 58.387 33.333 0.00 0.00 0.00 2.73
129 130 8.732746 AGAAAAGAAGAACTAAAACTGCACTA 57.267 30.769 0.00 0.00 0.00 2.74
130 131 7.631717 AGAAAAGAAGAACTAAAACTGCACT 57.368 32.000 0.00 0.00 0.00 4.40
131 132 8.184848 AGAAGAAAAGAAGAACTAAAACTGCAC 58.815 33.333 0.00 0.00 0.00 4.57
132 133 8.281212 AGAAGAAAAGAAGAACTAAAACTGCA 57.719 30.769 0.00 0.00 0.00 4.41
141 142 9.688592 CATGCAAATAAGAAGAAAAGAAGAACT 57.311 29.630 0.00 0.00 0.00 3.01
142 143 8.430828 GCATGCAAATAAGAAGAAAAGAAGAAC 58.569 33.333 14.21 0.00 0.00 3.01
143 144 7.326789 CGCATGCAAATAAGAAGAAAAGAAGAA 59.673 33.333 19.57 0.00 0.00 2.52
144 145 6.803320 CGCATGCAAATAAGAAGAAAAGAAGA 59.197 34.615 19.57 0.00 0.00 2.87
145 146 6.583806 ACGCATGCAAATAAGAAGAAAAGAAG 59.416 34.615 19.57 0.00 0.00 2.85
146 147 6.446318 ACGCATGCAAATAAGAAGAAAAGAA 58.554 32.000 19.57 0.00 0.00 2.52
147 148 6.012658 ACGCATGCAAATAAGAAGAAAAGA 57.987 33.333 19.57 0.00 0.00 2.52
148 149 7.023575 AGTACGCATGCAAATAAGAAGAAAAG 58.976 34.615 19.57 0.00 0.00 2.27
149 150 6.908825 AGTACGCATGCAAATAAGAAGAAAA 58.091 32.000 19.57 0.00 0.00 2.29
150 151 6.494893 AGTACGCATGCAAATAAGAAGAAA 57.505 33.333 19.57 0.00 0.00 2.52
151 152 7.603963 TTAGTACGCATGCAAATAAGAAGAA 57.396 32.000 19.57 0.00 0.00 2.52
152 153 7.494298 TCATTAGTACGCATGCAAATAAGAAGA 59.506 33.333 19.57 10.81 0.00 2.87
153 154 7.630026 TCATTAGTACGCATGCAAATAAGAAG 58.370 34.615 19.57 8.97 0.00 2.85
154 155 7.546778 TCATTAGTACGCATGCAAATAAGAA 57.453 32.000 19.57 2.79 0.00 2.52
155 156 7.494298 TCTTCATTAGTACGCATGCAAATAAGA 59.506 33.333 19.57 12.97 0.00 2.10
156 157 7.630026 TCTTCATTAGTACGCATGCAAATAAG 58.370 34.615 19.57 11.11 0.00 1.73
157 158 7.494298 TCTCTTCATTAGTACGCATGCAAATAA 59.506 33.333 19.57 14.54 0.00 1.40
158 159 6.983890 TCTCTTCATTAGTACGCATGCAAATA 59.016 34.615 19.57 5.79 0.00 1.40
159 160 5.817296 TCTCTTCATTAGTACGCATGCAAAT 59.183 36.000 19.57 6.87 0.00 2.32
160 161 5.175127 TCTCTTCATTAGTACGCATGCAAA 58.825 37.500 19.57 0.96 0.00 3.68
161 162 4.754322 TCTCTTCATTAGTACGCATGCAA 58.246 39.130 19.57 3.96 0.00 4.08
162 163 4.385358 TCTCTTCATTAGTACGCATGCA 57.615 40.909 19.57 0.00 0.00 3.96
163 164 5.226396 AGATCTCTTCATTAGTACGCATGC 58.774 41.667 7.91 7.91 0.00 4.06
164 165 7.706281 AAAGATCTCTTCATTAGTACGCATG 57.294 36.000 0.00 0.00 34.61 4.06
165 166 8.200792 AGAAAAGATCTCTTCATTAGTACGCAT 58.799 33.333 11.32 0.00 34.61 4.73
166 167 7.548097 AGAAAAGATCTCTTCATTAGTACGCA 58.452 34.615 11.32 0.00 34.61 5.24
167 168 7.995463 AGAAAAGATCTCTTCATTAGTACGC 57.005 36.000 11.32 0.00 34.61 4.42
181 182 0.908198 AGCAGCCGGAGAAAAGATCT 59.092 50.000 5.05 0.00 42.61 2.75
182 183 1.743996 AAGCAGCCGGAGAAAAGATC 58.256 50.000 5.05 0.00 0.00 2.75
183 184 1.815003 CAAAGCAGCCGGAGAAAAGAT 59.185 47.619 5.05 0.00 0.00 2.40
184 185 1.238439 CAAAGCAGCCGGAGAAAAGA 58.762 50.000 5.05 0.00 0.00 2.52
185 186 0.387750 GCAAAGCAGCCGGAGAAAAG 60.388 55.000 5.05 0.00 0.00 2.27
186 187 1.659794 GCAAAGCAGCCGGAGAAAA 59.340 52.632 5.05 0.00 0.00 2.29
187 188 2.616330 CGCAAAGCAGCCGGAGAAA 61.616 57.895 5.05 0.00 0.00 2.52
188 189 3.049674 CGCAAAGCAGCCGGAGAA 61.050 61.111 5.05 0.00 0.00 2.87
189 190 4.314440 ACGCAAAGCAGCCGGAGA 62.314 61.111 5.05 0.00 0.00 3.71
190 191 4.093952 CACGCAAAGCAGCCGGAG 62.094 66.667 5.05 0.00 0.00 4.63
196 197 3.483235 AAACCGCCACGCAAAGCAG 62.483 57.895 0.00 0.00 0.00 4.24
197 198 3.477224 GAAACCGCCACGCAAAGCA 62.477 57.895 0.00 0.00 0.00 3.91
198 199 2.677573 AAGAAACCGCCACGCAAAGC 62.678 55.000 0.00 0.00 0.00 3.51
199 200 0.248866 AAAGAAACCGCCACGCAAAG 60.249 50.000 0.00 0.00 0.00 2.77
200 201 0.248702 GAAAGAAACCGCCACGCAAA 60.249 50.000 0.00 0.00 0.00 3.68
201 202 1.098712 AGAAAGAAACCGCCACGCAA 61.099 50.000 0.00 0.00 0.00 4.85
202 203 1.098712 AAGAAAGAAACCGCCACGCA 61.099 50.000 0.00 0.00 0.00 5.24
203 204 0.030235 AAAGAAAGAAACCGCCACGC 59.970 50.000 0.00 0.00 0.00 5.34
204 205 2.485266 AAAAGAAAGAAACCGCCACG 57.515 45.000 0.00 0.00 0.00 4.94
230 231 1.563435 ATCACTATGCATGCGAGCGC 61.563 55.000 14.09 8.08 42.35 5.92
231 232 1.701704 TATCACTATGCATGCGAGCG 58.298 50.000 14.09 7.14 37.31 5.03
232 233 3.120408 CCTTTATCACTATGCATGCGAGC 60.120 47.826 14.09 0.00 0.00 5.03
233 234 3.434641 CCCTTTATCACTATGCATGCGAG 59.565 47.826 14.09 15.10 0.00 5.03
234 235 3.070878 TCCCTTTATCACTATGCATGCGA 59.929 43.478 14.09 3.74 0.00 5.10
235 236 3.402110 TCCCTTTATCACTATGCATGCG 58.598 45.455 14.09 2.64 0.00 4.73
236 237 5.251764 AGATCCCTTTATCACTATGCATGC 58.748 41.667 11.82 11.82 0.00 4.06
237 238 7.756395 AAAGATCCCTTTATCACTATGCATG 57.244 36.000 10.16 1.82 40.59 4.06
238 239 8.773033 AAAAAGATCCCTTTATCACTATGCAT 57.227 30.769 3.79 3.79 41.46 3.96
260 261 6.542005 GGATGCTTGGGAAAAGAAAAGAAAAA 59.458 34.615 0.00 0.00 0.00 1.94
261 262 6.054941 GGATGCTTGGGAAAAGAAAAGAAAA 58.945 36.000 0.00 0.00 0.00 2.29
262 263 5.366477 AGGATGCTTGGGAAAAGAAAAGAAA 59.634 36.000 0.00 0.00 0.00 2.52
263 264 4.901250 AGGATGCTTGGGAAAAGAAAAGAA 59.099 37.500 0.00 0.00 0.00 2.52
264 265 4.482990 AGGATGCTTGGGAAAAGAAAAGA 58.517 39.130 0.00 0.00 0.00 2.52
265 266 4.879197 AGGATGCTTGGGAAAAGAAAAG 57.121 40.909 0.00 0.00 0.00 2.27
266 267 8.608185 AATATAGGATGCTTGGGAAAAGAAAA 57.392 30.769 0.00 0.00 0.00 2.29
267 268 8.061304 AGAATATAGGATGCTTGGGAAAAGAAA 58.939 33.333 0.00 0.00 0.00 2.52
268 269 7.586349 AGAATATAGGATGCTTGGGAAAAGAA 58.414 34.615 0.00 0.00 0.00 2.52
269 270 7.147320 TGAGAATATAGGATGCTTGGGAAAAGA 60.147 37.037 0.00 0.00 0.00 2.52
270 271 7.000472 TGAGAATATAGGATGCTTGGGAAAAG 59.000 38.462 0.00 0.00 0.00 2.27
271 272 6.910191 TGAGAATATAGGATGCTTGGGAAAA 58.090 36.000 0.00 0.00 0.00 2.29
272 273 6.514012 TGAGAATATAGGATGCTTGGGAAA 57.486 37.500 0.00 0.00 0.00 3.13
273 274 6.514012 TTGAGAATATAGGATGCTTGGGAA 57.486 37.500 0.00 0.00 0.00 3.97
274 275 6.126507 TGTTTGAGAATATAGGATGCTTGGGA 60.127 38.462 0.00 0.00 0.00 4.37
275 276 6.064060 TGTTTGAGAATATAGGATGCTTGGG 58.936 40.000 0.00 0.00 0.00 4.12
276 277 7.572523 TTGTTTGAGAATATAGGATGCTTGG 57.427 36.000 0.00 0.00 0.00 3.61
288 289 9.542462 GTGGCATAGTAGTATTGTTTGAGAATA 57.458 33.333 0.00 0.00 0.00 1.75
289 290 7.224753 CGTGGCATAGTAGTATTGTTTGAGAAT 59.775 37.037 0.00 0.00 0.00 2.40
290 291 6.533723 CGTGGCATAGTAGTATTGTTTGAGAA 59.466 38.462 0.00 0.00 0.00 2.87
291 292 6.040247 CGTGGCATAGTAGTATTGTTTGAGA 58.960 40.000 0.00 0.00 0.00 3.27
292 293 5.810587 ACGTGGCATAGTAGTATTGTTTGAG 59.189 40.000 0.00 0.00 0.00 3.02
293 294 5.726397 ACGTGGCATAGTAGTATTGTTTGA 58.274 37.500 0.00 0.00 0.00 2.69
294 295 7.709269 ATACGTGGCATAGTAGTATTGTTTG 57.291 36.000 0.00 0.00 0.00 2.93
295 296 7.869429 GGTATACGTGGCATAGTAGTATTGTTT 59.131 37.037 0.00 0.00 31.43 2.83
296 297 7.014518 TGGTATACGTGGCATAGTAGTATTGTT 59.985 37.037 0.00 0.00 31.43 2.83
297 298 6.491062 TGGTATACGTGGCATAGTAGTATTGT 59.509 38.462 0.00 0.00 31.43 2.71
298 299 6.916440 TGGTATACGTGGCATAGTAGTATTG 58.084 40.000 0.00 0.00 31.43 1.90
299 300 7.395206 TGATGGTATACGTGGCATAGTAGTATT 59.605 37.037 0.00 0.00 31.43 1.89
300 301 6.888088 TGATGGTATACGTGGCATAGTAGTAT 59.112 38.462 0.00 8.86 33.29 2.12
301 302 6.240145 TGATGGTATACGTGGCATAGTAGTA 58.760 40.000 0.00 3.10 0.00 1.82
302 303 5.074804 TGATGGTATACGTGGCATAGTAGT 58.925 41.667 0.00 1.22 0.00 2.73
303 304 5.638596 TGATGGTATACGTGGCATAGTAG 57.361 43.478 0.00 0.00 0.00 2.57
304 305 6.436218 AGAATGATGGTATACGTGGCATAGTA 59.564 38.462 0.00 7.96 0.00 1.82
305 306 5.246203 AGAATGATGGTATACGTGGCATAGT 59.754 40.000 0.00 0.00 0.00 2.12
306 307 5.724328 AGAATGATGGTATACGTGGCATAG 58.276 41.667 0.00 0.00 0.00 2.23
307 308 5.480422 AGAGAATGATGGTATACGTGGCATA 59.520 40.000 0.00 0.00 0.00 3.14
308 309 4.284490 AGAGAATGATGGTATACGTGGCAT 59.716 41.667 0.00 0.00 0.00 4.40
309 310 3.641436 AGAGAATGATGGTATACGTGGCA 59.359 43.478 0.00 0.00 0.00 4.92
310 311 4.238514 GAGAGAATGATGGTATACGTGGC 58.761 47.826 0.00 0.00 0.00 5.01
311 312 4.476862 CGAGAGAATGATGGTATACGTGG 58.523 47.826 0.00 0.00 0.00 4.94
312 313 3.914966 GCGAGAGAATGATGGTATACGTG 59.085 47.826 0.00 0.00 0.00 4.49
313 314 3.568430 TGCGAGAGAATGATGGTATACGT 59.432 43.478 0.00 0.00 0.00 3.57
314 315 4.160736 TGCGAGAGAATGATGGTATACG 57.839 45.455 0.00 0.00 0.00 3.06
315 316 3.923461 GCTGCGAGAGAATGATGGTATAC 59.077 47.826 0.00 0.00 0.00 1.47
316 317 3.573967 TGCTGCGAGAGAATGATGGTATA 59.426 43.478 0.00 0.00 0.00 1.47
317 318 2.366590 TGCTGCGAGAGAATGATGGTAT 59.633 45.455 0.00 0.00 0.00 2.73
318 319 1.756538 TGCTGCGAGAGAATGATGGTA 59.243 47.619 0.00 0.00 0.00 3.25
319 320 0.538584 TGCTGCGAGAGAATGATGGT 59.461 50.000 0.00 0.00 0.00 3.55
320 321 1.660167 TTGCTGCGAGAGAATGATGG 58.340 50.000 0.00 0.00 0.00 3.51
321 322 3.965292 AATTGCTGCGAGAGAATGATG 57.035 42.857 0.00 0.00 0.00 3.07
322 323 4.978083 AAAATTGCTGCGAGAGAATGAT 57.022 36.364 0.00 0.00 0.00 2.45
323 324 4.771590 AAAAATTGCTGCGAGAGAATGA 57.228 36.364 0.00 0.00 0.00 2.57
324 325 6.317088 TCTTAAAAATTGCTGCGAGAGAATG 58.683 36.000 0.00 0.00 0.00 2.67
325 326 6.500684 TCTTAAAAATTGCTGCGAGAGAAT 57.499 33.333 0.00 0.00 0.00 2.40
326 327 5.940192 TCTTAAAAATTGCTGCGAGAGAA 57.060 34.783 0.00 0.00 0.00 2.87
327 328 6.500684 AATCTTAAAAATTGCTGCGAGAGA 57.499 33.333 0.00 0.00 0.00 3.10
328 329 7.750458 TGTTAATCTTAAAAATTGCTGCGAGAG 59.250 33.333 0.00 0.00 0.00 3.20
329 330 7.589395 TGTTAATCTTAAAAATTGCTGCGAGA 58.411 30.769 0.00 0.00 0.00 4.04
330 331 7.795431 TGTTAATCTTAAAAATTGCTGCGAG 57.205 32.000 0.00 0.00 0.00 5.03
331 332 8.755696 AATGTTAATCTTAAAAATTGCTGCGA 57.244 26.923 0.00 0.00 0.00 5.10
332 333 9.885743 GTAATGTTAATCTTAAAAATTGCTGCG 57.114 29.630 0.00 0.00 0.00 5.18
346 347 9.823647 CTGTACTGAATGAGGTAATGTTAATCT 57.176 33.333 0.00 0.00 0.00 2.40
347 348 9.817809 TCTGTACTGAATGAGGTAATGTTAATC 57.182 33.333 0.00 0.00 0.00 1.75
348 349 9.601217 GTCTGTACTGAATGAGGTAATGTTAAT 57.399 33.333 3.77 0.00 0.00 1.40
349 350 8.590204 TGTCTGTACTGAATGAGGTAATGTTAA 58.410 33.333 3.77 0.00 0.00 2.01
350 351 8.033038 GTGTCTGTACTGAATGAGGTAATGTTA 58.967 37.037 3.77 0.00 0.00 2.41
351 352 6.874134 GTGTCTGTACTGAATGAGGTAATGTT 59.126 38.462 3.77 0.00 0.00 2.71
352 353 6.211584 AGTGTCTGTACTGAATGAGGTAATGT 59.788 38.462 3.77 0.00 0.00 2.71
353 354 6.634805 AGTGTCTGTACTGAATGAGGTAATG 58.365 40.000 3.77 0.00 0.00 1.90
354 355 6.859112 AGTGTCTGTACTGAATGAGGTAAT 57.141 37.500 3.77 0.00 0.00 1.89
355 356 6.717997 TGTAGTGTCTGTACTGAATGAGGTAA 59.282 38.462 3.77 0.00 32.19 2.85
356 357 6.150641 GTGTAGTGTCTGTACTGAATGAGGTA 59.849 42.308 3.77 0.00 32.19 3.08
357 358 5.047943 GTGTAGTGTCTGTACTGAATGAGGT 60.048 44.000 3.77 0.00 32.19 3.85
358 359 5.184096 AGTGTAGTGTCTGTACTGAATGAGG 59.816 44.000 3.77 0.00 32.19 3.86
359 360 6.260870 AGTGTAGTGTCTGTACTGAATGAG 57.739 41.667 3.77 0.00 32.19 2.90
360 361 6.264518 TCAAGTGTAGTGTCTGTACTGAATGA 59.735 38.462 3.77 0.00 32.19 2.57
361 362 6.363626 GTCAAGTGTAGTGTCTGTACTGAATG 59.636 42.308 3.77 0.00 32.19 2.67
362 363 6.265649 AGTCAAGTGTAGTGTCTGTACTGAAT 59.734 38.462 3.77 0.00 32.19 2.57
363 364 5.593095 AGTCAAGTGTAGTGTCTGTACTGAA 59.407 40.000 3.77 0.00 32.19 3.02
364 365 5.131067 AGTCAAGTGTAGTGTCTGTACTGA 58.869 41.667 0.00 0.00 32.19 3.41
365 366 5.440234 AGTCAAGTGTAGTGTCTGTACTG 57.560 43.478 0.00 0.00 32.19 2.74
366 367 4.519730 GGAGTCAAGTGTAGTGTCTGTACT 59.480 45.833 0.00 0.00 34.71 2.73
367 368 4.519730 AGGAGTCAAGTGTAGTGTCTGTAC 59.480 45.833 0.00 0.00 0.00 2.90
368 369 4.726583 AGGAGTCAAGTGTAGTGTCTGTA 58.273 43.478 0.00 0.00 0.00 2.74
369 370 3.567397 AGGAGTCAAGTGTAGTGTCTGT 58.433 45.455 0.00 0.00 0.00 3.41
370 371 5.004448 TCTAGGAGTCAAGTGTAGTGTCTG 58.996 45.833 0.00 0.00 0.00 3.51
371 372 5.244189 TCTAGGAGTCAAGTGTAGTGTCT 57.756 43.478 0.00 0.00 0.00 3.41
372 373 6.518208 AATCTAGGAGTCAAGTGTAGTGTC 57.482 41.667 0.00 0.00 0.00 3.67
373 374 6.919775 AAATCTAGGAGTCAAGTGTAGTGT 57.080 37.500 0.00 0.00 0.00 3.55
375 376 8.852135 GCTATAAATCTAGGAGTCAAGTGTAGT 58.148 37.037 0.00 0.00 0.00 2.73
376 377 8.018520 CGCTATAAATCTAGGAGTCAAGTGTAG 58.981 40.741 0.00 0.00 0.00 2.74
377 378 7.501559 ACGCTATAAATCTAGGAGTCAAGTGTA 59.498 37.037 0.00 0.00 0.00 2.90
378 379 6.321690 ACGCTATAAATCTAGGAGTCAAGTGT 59.678 38.462 0.00 0.00 0.00 3.55
379 380 6.740110 ACGCTATAAATCTAGGAGTCAAGTG 58.260 40.000 0.00 0.00 0.00 3.16
380 381 6.963083 ACGCTATAAATCTAGGAGTCAAGT 57.037 37.500 0.00 0.00 0.00 3.16
381 382 9.745880 TTTTACGCTATAAATCTAGGAGTCAAG 57.254 33.333 0.00 0.00 0.00 3.02
407 408 8.970293 GCTAATGTACACGTTAAAAATGGTTTT 58.030 29.630 0.00 0.00 40.15 2.43
408 409 7.324135 CGCTAATGTACACGTTAAAAATGGTTT 59.676 33.333 0.00 0.00 0.00 3.27
409 410 6.797995 CGCTAATGTACACGTTAAAAATGGTT 59.202 34.615 0.00 0.00 0.00 3.67
410 411 6.073112 ACGCTAATGTACACGTTAAAAATGGT 60.073 34.615 0.00 0.00 34.62 3.55
411 412 6.247582 CACGCTAATGTACACGTTAAAAATGG 59.752 38.462 6.52 0.00 36.45 3.16
412 413 7.010606 TCACGCTAATGTACACGTTAAAAATG 58.989 34.615 6.52 0.00 36.45 2.32
413 414 7.119605 TCACGCTAATGTACACGTTAAAAAT 57.880 32.000 6.52 0.00 36.45 1.82
414 415 6.522233 TCACGCTAATGTACACGTTAAAAA 57.478 33.333 6.52 0.00 36.45 1.94
415 416 6.522233 TTCACGCTAATGTACACGTTAAAA 57.478 33.333 6.52 0.76 36.45 1.52
416 417 6.709145 ATTCACGCTAATGTACACGTTAAA 57.291 33.333 6.52 5.47 36.45 1.52
417 418 6.527089 CAATTCACGCTAATGTACACGTTAA 58.473 36.000 6.52 6.24 36.45 2.01
418 419 5.444877 GCAATTCACGCTAATGTACACGTTA 60.445 40.000 6.52 0.00 36.45 3.18
419 420 4.668177 GCAATTCACGCTAATGTACACGTT 60.668 41.667 6.52 0.00 36.45 3.99
420 421 3.181524 GCAATTCACGCTAATGTACACGT 60.182 43.478 0.00 0.00 39.78 4.49
421 422 3.342269 GCAATTCACGCTAATGTACACG 58.658 45.455 0.00 0.00 0.00 4.49
422 423 3.126171 TGGCAATTCACGCTAATGTACAC 59.874 43.478 0.00 0.00 0.00 2.90
423 424 3.339141 TGGCAATTCACGCTAATGTACA 58.661 40.909 0.00 0.00 0.00 2.90
424 425 4.349663 TTGGCAATTCACGCTAATGTAC 57.650 40.909 0.00 0.00 0.00 2.90
425 426 4.919206 CATTGGCAATTCACGCTAATGTA 58.081 39.130 10.65 0.00 46.95 2.29
426 427 3.772932 CATTGGCAATTCACGCTAATGT 58.227 40.909 10.65 0.00 46.95 2.71
428 429 3.696051 AGACATTGGCAATTCACGCTAAT 59.304 39.130 10.65 0.00 40.71 1.73
429 430 3.081061 AGACATTGGCAATTCACGCTAA 58.919 40.909 10.65 0.00 34.16 3.09
430 431 2.419673 CAGACATTGGCAATTCACGCTA 59.580 45.455 10.65 0.00 0.00 4.26
431 432 1.200716 CAGACATTGGCAATTCACGCT 59.799 47.619 10.65 0.91 0.00 5.07
432 433 1.621107 CAGACATTGGCAATTCACGC 58.379 50.000 10.65 0.00 0.00 5.34
433 434 1.068402 TGCAGACATTGGCAATTCACG 60.068 47.619 10.65 1.61 37.03 4.35
434 435 2.728690 TGCAGACATTGGCAATTCAC 57.271 45.000 10.65 5.06 37.03 3.18
435 436 2.563620 ACATGCAGACATTGGCAATTCA 59.436 40.909 10.65 4.39 44.20 2.57
436 437 3.241067 ACATGCAGACATTGGCAATTC 57.759 42.857 10.65 11.41 44.20 2.17
437 438 3.688694 AACATGCAGACATTGGCAATT 57.311 38.095 10.65 2.25 44.20 2.32
438 439 3.510753 TGTAACATGCAGACATTGGCAAT 59.489 39.130 6.96 6.96 44.20 3.56
439 440 2.889678 TGTAACATGCAGACATTGGCAA 59.110 40.909 0.68 0.68 44.20 4.52
440 441 2.488937 CTGTAACATGCAGACATTGGCA 59.511 45.455 0.00 0.00 45.23 4.92
441 442 2.489329 ACTGTAACATGCAGACATTGGC 59.511 45.455 5.90 0.00 37.40 4.52
442 443 4.771590 AACTGTAACATGCAGACATTGG 57.228 40.909 5.90 0.00 37.40 3.16
468 469 5.399301 GTCACATGTTGTATTTGTGCTCAAC 59.601 40.000 0.00 0.00 40.38 3.18
469 470 5.507149 GGTCACATGTTGTATTTGTGCTCAA 60.507 40.000 0.00 0.00 40.38 3.02
470 471 4.023279 GGTCACATGTTGTATTTGTGCTCA 60.023 41.667 0.00 0.00 40.38 4.26
471 472 4.023279 TGGTCACATGTTGTATTTGTGCTC 60.023 41.667 0.00 0.00 40.38 4.26
472 473 3.888323 TGGTCACATGTTGTATTTGTGCT 59.112 39.130 0.00 0.00 40.38 4.40
473 474 4.235939 TGGTCACATGTTGTATTTGTGC 57.764 40.909 0.00 0.00 40.38 4.57
474 475 8.809159 TTAATTGGTCACATGTTGTATTTGTG 57.191 30.769 0.00 0.00 41.60 3.33
475 476 8.637986 ACTTAATTGGTCACATGTTGTATTTGT 58.362 29.630 0.00 0.00 0.00 2.83
478 479 9.515226 ACTACTTAATTGGTCACATGTTGTATT 57.485 29.630 0.00 0.00 0.00 1.89
480 481 9.647797 CTACTACTTAATTGGTCACATGTTGTA 57.352 33.333 0.00 0.00 0.00 2.41
481 482 7.119262 GCTACTACTTAATTGGTCACATGTTGT 59.881 37.037 0.00 0.00 0.00 3.32
482 483 7.334421 AGCTACTACTTAATTGGTCACATGTTG 59.666 37.037 0.00 0.00 0.00 3.33
483 484 7.334421 CAGCTACTACTTAATTGGTCACATGTT 59.666 37.037 0.00 0.00 0.00 2.71
484 485 6.818644 CAGCTACTACTTAATTGGTCACATGT 59.181 38.462 0.00 0.00 0.00 3.21
485 486 6.258727 CCAGCTACTACTTAATTGGTCACATG 59.741 42.308 0.00 0.00 0.00 3.21
486 487 6.349300 CCAGCTACTACTTAATTGGTCACAT 58.651 40.000 0.00 0.00 0.00 3.21
487 488 5.338056 CCCAGCTACTACTTAATTGGTCACA 60.338 44.000 0.00 0.00 0.00 3.58
488 489 5.116882 CCCAGCTACTACTTAATTGGTCAC 58.883 45.833 0.00 0.00 0.00 3.67
489 490 4.383770 GCCCAGCTACTACTTAATTGGTCA 60.384 45.833 0.00 0.00 0.00 4.02
490 491 4.127907 GCCCAGCTACTACTTAATTGGTC 58.872 47.826 0.00 0.00 0.00 4.02
491 492 3.780850 AGCCCAGCTACTACTTAATTGGT 59.219 43.478 0.00 0.00 36.99 3.67
492 493 4.423625 AGCCCAGCTACTACTTAATTGG 57.576 45.455 0.00 0.00 36.99 3.16
511 512 2.860735 CACTCGAACTAAGGCATGTAGC 59.139 50.000 0.00 0.00 44.65 3.58
512 513 3.448686 CCACTCGAACTAAGGCATGTAG 58.551 50.000 0.00 0.00 0.00 2.74
513 514 2.167693 CCCACTCGAACTAAGGCATGTA 59.832 50.000 0.00 0.00 0.00 2.29
514 515 1.066143 CCCACTCGAACTAAGGCATGT 60.066 52.381 0.00 0.00 0.00 3.21
515 516 1.207089 TCCCACTCGAACTAAGGCATG 59.793 52.381 0.00 0.00 0.00 4.06
516 517 1.568504 TCCCACTCGAACTAAGGCAT 58.431 50.000 0.00 0.00 0.00 4.40
517 518 1.275291 CTTCCCACTCGAACTAAGGCA 59.725 52.381 0.00 0.00 0.00 4.75
518 519 2.007547 GCTTCCCACTCGAACTAAGGC 61.008 57.143 0.00 0.00 0.00 4.35
519 520 1.275291 TGCTTCCCACTCGAACTAAGG 59.725 52.381 0.00 0.00 0.00 2.69
520 521 2.737252 GTTGCTTCCCACTCGAACTAAG 59.263 50.000 0.00 0.00 0.00 2.18
521 522 2.367567 AGTTGCTTCCCACTCGAACTAA 59.632 45.455 0.00 0.00 0.00 2.24
522 523 1.968493 AGTTGCTTCCCACTCGAACTA 59.032 47.619 0.00 0.00 0.00 2.24
523 524 0.759346 AGTTGCTTCCCACTCGAACT 59.241 50.000 0.00 0.00 0.00 3.01
524 525 1.594331 AAGTTGCTTCCCACTCGAAC 58.406 50.000 0.00 0.00 0.00 3.95
525 526 2.341846 AAAGTTGCTTCCCACTCGAA 57.658 45.000 0.00 0.00 0.00 3.71
526 527 2.218603 GAAAAGTTGCTTCCCACTCGA 58.781 47.619 0.00 0.00 0.00 4.04
527 528 1.069906 CGAAAAGTTGCTTCCCACTCG 60.070 52.381 0.00 0.00 0.00 4.18
528 529 2.218603 TCGAAAAGTTGCTTCCCACTC 58.781 47.619 0.00 0.00 0.00 3.51
529 530 2.341846 TCGAAAAGTTGCTTCCCACT 57.658 45.000 0.00 0.00 0.00 4.00
530 531 2.351738 CCATCGAAAAGTTGCTTCCCAC 60.352 50.000 0.00 0.00 0.00 4.61
548 549 4.329545 ACACAAGCCCGCGTCCAT 62.330 61.111 4.92 0.00 0.00 3.41
638 639 2.425829 CCCCTACCACCTATCACTAGCA 60.426 54.545 0.00 0.00 0.00 3.49
673 5246 3.862845 GCACGAAACATTTGTTCCAAAGT 59.137 39.130 0.00 0.00 37.25 2.66
782 5357 0.546122 TTGGTGTGGACAAGCTGTCT 59.454 50.000 13.59 0.00 46.19 3.41
939 5514 1.821753 GGTGTAGAGAAGAGCAGCAGA 59.178 52.381 0.00 0.00 0.00 4.26
1118 5694 5.191722 TGGGACCAAGTAATCTTAGCAATCT 59.808 40.000 0.00 0.00 32.07 2.40
1195 5771 0.941963 TGCCTGGGACTCTATAGGGT 59.058 55.000 4.49 4.49 0.00 4.34
1332 5908 7.565398 AGATTACTAATACCTGTGTGTCCATCT 59.435 37.037 0.00 0.00 0.00 2.90
1342 5918 7.439108 AGCCAAGAAGATTACTAATACCTGT 57.561 36.000 0.00 0.00 0.00 4.00
1558 6169 7.090953 TCCCATTTATTATGTCCGTTTCAAC 57.909 36.000 0.00 0.00 0.00 3.18
1578 6189 1.568597 CCATTATCCAACCCACTCCCA 59.431 52.381 0.00 0.00 0.00 4.37
1614 6225 1.593196 CCACAACGAAAAGAGCCAGA 58.407 50.000 0.00 0.00 0.00 3.86
1615 6226 0.040067 GCCACAACGAAAAGAGCCAG 60.040 55.000 0.00 0.00 0.00 4.85
1679 6290 1.384191 GTCCCCTGGTGCTCCAAAT 59.616 57.895 9.14 0.00 43.81 2.32
1922 6533 7.066766 GCCTCATCTAGTGAATCAAATGAAGTT 59.933 37.037 0.00 0.00 36.14 2.66
1940 6551 5.791336 TGTAGAATTGATACGCCTCATCT 57.209 39.130 0.00 0.00 0.00 2.90
2067 6678 6.620678 GCACTGGCAGAAATATTAAGAAACA 58.379 36.000 23.66 0.00 40.72 2.83
2138 6760 4.225492 TGCCAATGGACATGGAATCAATTT 59.775 37.500 2.05 0.00 40.56 1.82
2172 6794 6.882768 AGTTGATCTTGTATTCTCCCTCTT 57.117 37.500 0.00 0.00 0.00 2.85
2362 7743 2.225019 ACATTGTTTTCTCTCAGCTGCG 59.775 45.455 9.47 2.08 0.00 5.18
2483 7866 7.646314 CATCTGAATCAGACTGTTCTTTGTTT 58.354 34.615 15.96 0.00 43.63 2.83
2520 7903 4.397481 TCATCTCTGCAAGTATGTCCAG 57.603 45.455 0.00 0.00 32.68 3.86
2634 8017 4.084287 ACATCTCCGAAACACCTGTACTA 58.916 43.478 0.00 0.00 0.00 1.82
2707 8090 4.576053 TCTGGAAGTGATTGTTGAACAGTG 59.424 41.667 0.00 0.00 33.76 3.66
2910 8323 7.283580 TGAATGCATAATGTCATCATGTCAGAA 59.716 33.333 0.00 0.00 34.19 3.02
3348 8763 3.695060 TCAGAGTCCCTATCGAACTGAAC 59.305 47.826 0.00 0.00 31.51 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.