Multiple sequence alignment - TraesCS5D01G467100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G467100 chr5D 100.000 3212 0 0 1 3212 509231676 509234887 0.000000e+00 5932.0
1 TraesCS5D01G467100 chr5B 88.297 2102 148 52 388 2448 639738485 639740529 0.000000e+00 2429.0
2 TraesCS5D01G467100 chr5B 91.852 405 28 3 1 404 639738061 639738461 7.780000e-156 560.0
3 TraesCS5D01G467100 chr5B 94.624 93 4 1 2501 2592 639740555 639740647 3.340000e-30 143.0
4 TraesCS5D01G467100 chr5B 91.429 70 6 0 2626 2695 639740653 639740722 2.640000e-16 97.1
5 TraesCS5D01G467100 chr5A 88.820 966 59 21 780 1717 636429005 636429949 0.000000e+00 1140.0
6 TraesCS5D01G467100 chr5A 92.527 736 38 15 1 734 636428285 636429005 0.000000e+00 1038.0
7 TraesCS5D01G467100 chr5A 84.125 926 83 24 1928 2803 636430153 636431064 0.000000e+00 837.0
8 TraesCS5D01G467100 chr5A 92.948 553 31 5 1 546 129232195 129231644 0.000000e+00 798.0
9 TraesCS5D01G467100 chr5A 85.915 213 16 9 556 757 129231376 129231167 6.980000e-52 215.0
10 TraesCS5D01G467100 chr1A 90.206 776 50 15 1 757 505307300 505308068 0.000000e+00 989.0
11 TraesCS5D01G467100 chr2D 90.194 775 49 17 1 757 287143897 287144662 0.000000e+00 985.0
12 TraesCS5D01G467100 chr2D 90.230 174 16 1 2144 2317 286693191 286693363 3.220000e-55 226.0
13 TraesCS5D01G467100 chr3D 89.846 778 50 19 1 757 470482635 470483404 0.000000e+00 972.0
14 TraesCS5D01G467100 chr2A 87.273 55 5 2 3159 3212 11702690 11702637 9.620000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G467100 chr5D 509231676 509234887 3211 False 5932.000 5932 100.000000 1 3212 1 chr5D.!!$F1 3211
1 TraesCS5D01G467100 chr5B 639738061 639740722 2661 False 807.275 2429 91.550500 1 2695 4 chr5B.!!$F1 2694
2 TraesCS5D01G467100 chr5A 636428285 636431064 2779 False 1005.000 1140 88.490667 1 2803 3 chr5A.!!$F1 2802
3 TraesCS5D01G467100 chr5A 129231167 129232195 1028 True 506.500 798 89.431500 1 757 2 chr5A.!!$R1 756
4 TraesCS5D01G467100 chr1A 505307300 505308068 768 False 989.000 989 90.206000 1 757 1 chr1A.!!$F1 756
5 TraesCS5D01G467100 chr2D 287143897 287144662 765 False 985.000 985 90.194000 1 757 1 chr2D.!!$F2 756
6 TraesCS5D01G467100 chr3D 470482635 470483404 769 False 972.000 972 89.846000 1 757 1 chr3D.!!$F1 756

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
810 1133 0.251742 TTTGCCATCTCCCTTGGTGG 60.252 55.0 0.0 0.0 36.57 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2487 2941 0.249784 CAGAGCATCCTCACCATCCG 60.25 60.0 0.0 0.0 40.68 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 57 3.084039 CCAGTTACATTGTCCTGTGCAT 58.916 45.455 12.70 0.00 0.00 3.96
56 58 3.119743 CCAGTTACATTGTCCTGTGCATG 60.120 47.826 12.70 0.00 0.00 4.06
61 63 3.700538 ACATTGTCCTGTGCATGGTTAT 58.299 40.909 8.29 0.04 0.00 1.89
96 98 3.058224 CGGGTCACAATCTCAACTTTTCC 60.058 47.826 0.00 0.00 0.00 3.13
166 168 4.687215 TCCGTGCTCAGCTGGTGC 62.687 66.667 15.13 18.44 40.05 5.01
372 377 1.064505 CGGTGGCATTGACATCATGAC 59.935 52.381 3.17 0.00 0.00 3.06
419 464 8.906867 ACATATTTGATTACAGCTTGCTATGTT 58.093 29.630 0.00 0.00 0.00 2.71
454 499 1.430632 CAAGTAATGCTGCGCTGGG 59.569 57.895 16.47 3.88 0.00 4.45
617 931 9.486497 TTTGCAAGTAATTAATTGATCTTTGCA 57.514 25.926 25.42 21.85 33.49 4.08
738 1061 1.474077 CAGGAAGGCAAAGCACATACC 59.526 52.381 0.00 0.00 0.00 2.73
758 1081 5.536497 ACCCACAGGATCTCCTTAATTTT 57.464 39.130 0.00 0.00 46.09 1.82
759 1082 5.903923 ACCCACAGGATCTCCTTAATTTTT 58.096 37.500 0.00 0.00 46.09 1.94
784 1107 6.963117 TTTTTGAGGGTAGGATCTCCTTAA 57.037 37.500 3.64 0.00 46.09 1.85
785 1108 6.963117 TTTTGAGGGTAGGATCTCCTTAAA 57.037 37.500 3.64 2.42 46.09 1.52
786 1109 7.525158 TTTTGAGGGTAGGATCTCCTTAAAT 57.475 36.000 3.64 0.00 46.09 1.40
787 1110 7.525158 TTTGAGGGTAGGATCTCCTTAAATT 57.475 36.000 3.64 0.00 46.09 1.82
788 1111 6.500589 TGAGGGTAGGATCTCCTTAAATTG 57.499 41.667 3.64 0.00 46.09 2.32
810 1133 0.251742 TTTGCCATCTCCCTTGGTGG 60.252 55.000 0.00 0.00 36.57 4.61
814 1137 0.995024 CCATCTCCCTTGGTGGAACT 59.005 55.000 0.00 0.00 38.35 3.01
815 1138 1.340405 CCATCTCCCTTGGTGGAACTG 60.340 57.143 0.00 0.00 38.35 3.16
840 1176 1.202627 CCCCACTAGCATCTTCAGCTC 60.203 57.143 0.00 0.00 42.32 4.09
841 1177 1.761784 CCCACTAGCATCTTCAGCTCT 59.238 52.381 0.00 0.00 42.32 4.09
842 1178 2.483363 CCCACTAGCATCTTCAGCTCTG 60.483 54.545 0.00 0.00 42.32 3.35
843 1179 2.203401 CACTAGCATCTTCAGCTCTGC 58.797 52.381 0.00 0.00 42.32 4.26
883 1219 4.476479 AGAGAAAGTATCCTTCCAAGCCAT 59.524 41.667 0.00 0.00 0.00 4.40
885 1221 2.918712 AGTATCCTTCCAAGCCATCG 57.081 50.000 0.00 0.00 0.00 3.84
936 1272 2.269172 CATAGCATCCTCATAGCTGCG 58.731 52.381 0.00 0.00 39.30 5.18
954 1290 1.735360 GTGCAAGCAGGTTTGAGCA 59.265 52.632 0.00 0.00 0.00 4.26
975 1311 4.321675 GCAGCTAGCTATAAGAACTCCCTC 60.322 50.000 18.86 0.00 41.15 4.30
984 1320 1.323412 AGAACTCCCTCATCGGATCG 58.677 55.000 0.00 0.00 33.16 3.69
999 1346 1.468914 GGATCGGTCTTGTTTCTTGCC 59.531 52.381 0.00 0.00 0.00 4.52
1090 1437 1.280133 CCTTCTTCATGGAGGAGTGCA 59.720 52.381 8.61 0.00 0.00 4.57
1123 1473 2.301583 GGTAAGGATCAGGATCAGCTCC 59.698 54.545 11.12 0.00 45.33 4.70
1136 1486 1.841556 AGCTCCTGTTTGGGTCCGA 60.842 57.895 0.00 0.00 36.20 4.55
1138 1488 0.744771 GCTCCTGTTTGGGTCCGATC 60.745 60.000 0.00 0.00 36.20 3.69
1172 1522 2.283173 GGGCCACTTCACCCTTGG 60.283 66.667 4.39 0.00 43.36 3.61
1242 1595 0.750546 CCATGGGACCATCAGTGCAG 60.751 60.000 2.85 0.00 38.89 4.41
1268 1621 3.370231 TGCACAGCAGCAGCATGG 61.370 61.111 3.17 0.00 45.49 3.66
1350 1703 1.079127 GGTGACCGAGGTGATGGTG 60.079 63.158 0.00 0.00 38.99 4.17
1362 1715 1.448540 GATGGTGTCCGGTGCAGAG 60.449 63.158 0.00 0.00 0.00 3.35
1381 1734 0.467804 GGAGGAGGAAGAGATGGTGC 59.532 60.000 0.00 0.00 0.00 5.01
1408 1761 0.108585 TGTTGCCGAAGAGGAAGCTT 59.891 50.000 0.00 0.00 45.00 3.74
1409 1762 0.799393 GTTGCCGAAGAGGAAGCTTC 59.201 55.000 18.54 18.54 45.00 3.86
1536 1889 1.358152 TCGGGAAACTGAGGGTGAAT 58.642 50.000 0.00 0.00 42.04 2.57
1680 2033 2.100631 CCAGGTGTTCGCCGATGAC 61.101 63.158 0.00 0.00 0.00 3.06
1705 2058 4.006319 GGTTGATCACTCTTTCCTTCTGG 58.994 47.826 0.00 0.00 0.00 3.86
1720 2073 6.985188 TCCTTCTGGTCTTGAATTAATTCG 57.015 37.500 20.45 9.57 35.72 3.34
1737 2100 5.470845 AATTCGCCACTTTAATCTTCTCG 57.529 39.130 0.00 0.00 0.00 4.04
1750 2114 1.549170 TCTTCTCGCTGTTCCCTAACC 59.451 52.381 0.00 0.00 34.49 2.85
1759 2123 1.004277 TGTTCCCTAACCACATGCTCC 59.996 52.381 0.00 0.00 34.49 4.70
1765 2129 2.228822 CCTAACCACATGCTCCAACAAC 59.771 50.000 0.00 0.00 0.00 3.32
1846 2248 4.617253 CATCATCATGCCCAATTGGAAT 57.383 40.909 26.60 15.57 37.39 3.01
1847 2249 5.731957 CATCATCATGCCCAATTGGAATA 57.268 39.130 26.60 11.55 37.39 1.75
1848 2250 5.720202 CATCATCATGCCCAATTGGAATAG 58.280 41.667 26.60 10.05 37.39 1.73
1849 2251 5.064314 TCATCATGCCCAATTGGAATAGA 57.936 39.130 26.60 17.23 37.39 1.98
1850 2252 5.456779 TCATCATGCCCAATTGGAATAGAA 58.543 37.500 26.60 3.61 37.39 2.10
1851 2253 6.079336 TCATCATGCCCAATTGGAATAGAAT 58.921 36.000 26.60 6.08 37.39 2.40
1852 2254 6.555738 TCATCATGCCCAATTGGAATAGAATT 59.444 34.615 26.60 2.20 37.39 2.17
1868 2290 9.460906 GGAATAGAATTTGATCATGCTTCTTTC 57.539 33.333 15.80 16.22 0.00 2.62
1927 2349 7.996066 TGTATATTTTATCAGGCCAAAGCACTA 59.004 33.333 5.01 0.00 42.56 2.74
1944 2366 6.228616 AGCACTAGAGAATAGGGAGAAAAC 57.771 41.667 0.00 0.00 0.00 2.43
2015 2440 7.445402 TGGAATCTTGCAATAGATTAGCCTAAC 59.555 37.037 12.55 0.89 43.18 2.34
2019 2444 4.058124 TGCAATAGATTAGCCTAACGCAG 58.942 43.478 0.00 0.00 41.38 5.18
2035 2460 6.863126 CCTAACGCAGTGAAGAATTTCATTTT 59.137 34.615 0.00 0.00 45.00 1.82
2040 2465 4.692155 CAGTGAAGAATTTCATTTTGGGGC 59.308 41.667 0.00 0.00 44.62 5.80
2041 2466 3.679502 GTGAAGAATTTCATTTTGGGGCG 59.320 43.478 0.00 0.00 44.62 6.13
2106 2533 2.167075 TCTGCTGCAGAGAATTCATCGA 59.833 45.455 27.35 1.91 35.39 3.59
2184 2614 4.199804 ACCAGAGCGAAGGTGTCT 57.800 55.556 0.00 0.00 39.88 3.41
2201 2631 1.669760 CTTTCGGCGGCCACTACAA 60.670 57.895 20.71 2.68 0.00 2.41
2235 2668 2.840038 TGCCAGAAGCTTCTAGAATCCA 59.160 45.455 28.02 11.64 44.23 3.41
2322 2770 1.069258 GCCCCGTAGCCTGTATGTC 59.931 63.158 0.00 0.00 0.00 3.06
2326 2774 0.459899 CCGTAGCCTGTATGTCTGCA 59.540 55.000 0.00 0.00 0.00 4.41
2360 2808 6.175712 GCTTAATAGCTGGTAGATTGCATC 57.824 41.667 0.00 0.00 44.27 3.91
2361 2809 5.702670 GCTTAATAGCTGGTAGATTGCATCA 59.297 40.000 0.00 0.00 44.27 3.07
2362 2810 6.128336 GCTTAATAGCTGGTAGATTGCATCAG 60.128 42.308 0.00 0.00 44.27 2.90
2363 2811 4.970860 ATAGCTGGTAGATTGCATCAGT 57.029 40.909 0.00 0.00 0.00 3.41
2365 2813 2.158842 AGCTGGTAGATTGCATCAGTCC 60.159 50.000 0.00 0.00 0.00 3.85
2366 2814 2.420547 GCTGGTAGATTGCATCAGTCCA 60.421 50.000 0.00 0.00 0.00 4.02
2367 2815 3.201290 CTGGTAGATTGCATCAGTCCAC 58.799 50.000 0.00 0.00 0.00 4.02
2368 2816 2.840038 TGGTAGATTGCATCAGTCCACT 59.160 45.455 0.00 0.00 0.00 4.00
2369 2817 4.030216 TGGTAGATTGCATCAGTCCACTA 58.970 43.478 0.00 0.00 0.00 2.74
2370 2818 4.141937 TGGTAGATTGCATCAGTCCACTAC 60.142 45.833 0.00 0.00 0.00 2.73
2411 2864 4.290093 TCCTACCAGCAGATGTGAATAGT 58.710 43.478 0.00 0.00 0.00 2.12
2448 2902 5.627172 TGATTTTCTCCGCGAAATTACTTG 58.373 37.500 8.23 0.00 41.04 3.16
2483 2937 5.277011 CCGATTATTGTACTGTACGACGAGA 60.277 44.000 10.00 0.00 0.00 4.04
2485 2939 3.754188 ATTGTACTGTACGACGAGACC 57.246 47.619 10.00 0.00 0.00 3.85
2487 2941 1.800586 TGTACTGTACGACGAGACCAC 59.199 52.381 12.87 0.00 0.00 4.16
2599 3108 4.728102 CGGTAACCACGCGCTGGA 62.728 66.667 27.07 9.18 43.95 3.86
2600 3109 2.357760 GGTAACCACGCGCTGGAA 60.358 61.111 27.07 15.34 43.95 3.53
2601 3110 1.743995 GGTAACCACGCGCTGGAAT 60.744 57.895 27.07 18.95 43.95 3.01
2602 3111 1.303091 GGTAACCACGCGCTGGAATT 61.303 55.000 27.07 17.06 43.95 2.17
2603 3112 0.179200 GTAACCACGCGCTGGAATTG 60.179 55.000 27.07 8.90 43.95 2.32
2604 3113 0.320858 TAACCACGCGCTGGAATTGA 60.321 50.000 27.07 9.78 43.95 2.57
2605 3114 1.852067 AACCACGCGCTGGAATTGAC 61.852 55.000 27.07 0.00 43.95 3.18
2606 3115 2.034879 CCACGCGCTGGAATTGACT 61.035 57.895 19.03 0.00 43.95 3.41
2607 3116 1.133253 CACGCGCTGGAATTGACTG 59.867 57.895 5.73 0.00 0.00 3.51
2608 3117 2.099062 CGCGCTGGAATTGACTGC 59.901 61.111 5.56 0.00 0.00 4.40
2609 3118 2.679934 CGCGCTGGAATTGACTGCA 61.680 57.895 5.56 0.00 33.62 4.41
2610 3119 1.136147 GCGCTGGAATTGACTGCAG 59.864 57.895 13.48 13.48 37.78 4.41
2614 3123 1.531423 CTGGAATTGACTGCAGCTGT 58.469 50.000 15.27 4.29 0.00 4.40
2615 3124 2.703416 CTGGAATTGACTGCAGCTGTA 58.297 47.619 15.27 10.46 0.00 2.74
2616 3125 2.676839 CTGGAATTGACTGCAGCTGTAG 59.323 50.000 27.78 27.78 0.00 2.74
2617 3126 2.302733 TGGAATTGACTGCAGCTGTAGA 59.697 45.455 34.60 15.75 0.00 2.59
2618 3127 3.054875 TGGAATTGACTGCAGCTGTAGAT 60.055 43.478 34.60 20.12 0.00 1.98
2619 3128 4.162131 TGGAATTGACTGCAGCTGTAGATA 59.838 41.667 34.60 20.60 0.00 1.98
2620 3129 4.509600 GGAATTGACTGCAGCTGTAGATAC 59.490 45.833 34.60 23.77 0.00 2.24
2621 3130 5.350504 AATTGACTGCAGCTGTAGATACT 57.649 39.130 34.60 15.11 0.00 2.12
2622 3131 6.461648 GGAATTGACTGCAGCTGTAGATACTA 60.462 42.308 34.60 21.20 0.00 1.82
2623 3132 4.902443 TGACTGCAGCTGTAGATACTAC 57.098 45.455 34.60 18.25 0.00 2.73
2624 3133 4.527944 TGACTGCAGCTGTAGATACTACT 58.472 43.478 34.60 13.26 0.00 2.57
2634 3143 2.123597 ATACTACTCCGCCGGCCA 60.124 61.111 23.46 6.73 0.00 5.36
2733 3242 2.000447 CGACGTTGATTCCTTCCCTTC 59.000 52.381 0.00 0.00 0.00 3.46
2745 3254 0.196118 TTCCCTTCCCTCCTGTTCCT 59.804 55.000 0.00 0.00 0.00 3.36
2779 3292 0.175760 TATGCAGTTGCTCGGAGGTC 59.824 55.000 7.20 0.00 42.66 3.85
2811 3324 3.660111 GTGCGGTGGCCACTGTTC 61.660 66.667 38.49 28.43 39.81 3.18
2812 3325 4.182433 TGCGGTGGCCACTGTTCA 62.182 61.111 38.49 28.31 39.81 3.18
2813 3326 3.660111 GCGGTGGCCACTGTTCAC 61.660 66.667 38.49 22.49 39.81 3.18
2814 3327 3.345808 CGGTGGCCACTGTTCACG 61.346 66.667 32.99 23.35 33.13 4.35
2815 3328 2.978010 GGTGGCCACTGTTCACGG 60.978 66.667 33.91 0.00 32.65 4.94
2816 3329 2.110213 GTGGCCACTGTTCACGGA 59.890 61.111 29.12 0.00 0.00 4.69
2817 3330 1.961277 GTGGCCACTGTTCACGGAG 60.961 63.158 29.12 0.00 0.00 4.63
2819 3332 1.116536 TGGCCACTGTTCACGGAGTA 61.117 55.000 0.00 0.00 41.61 2.59
2820 3333 0.389948 GGCCACTGTTCACGGAGTAG 60.390 60.000 0.00 0.00 41.61 2.57
2821 3334 1.014564 GCCACTGTTCACGGAGTAGC 61.015 60.000 0.00 0.00 41.61 3.58
2822 3335 0.389948 CCACTGTTCACGGAGTAGCC 60.390 60.000 0.00 0.00 41.61 3.93
2823 3336 0.603569 CACTGTTCACGGAGTAGCCT 59.396 55.000 0.00 0.00 41.61 4.58
2824 3337 1.000955 CACTGTTCACGGAGTAGCCTT 59.999 52.381 0.00 0.00 41.61 4.35
2825 3338 1.000955 ACTGTTCACGGAGTAGCCTTG 59.999 52.381 0.00 0.00 41.61 3.61
2826 3339 0.320374 TGTTCACGGAGTAGCCTTGG 59.680 55.000 0.00 0.00 41.61 3.61
2827 3340 1.019805 GTTCACGGAGTAGCCTTGGC 61.020 60.000 2.97 2.97 41.61 4.52
2828 3341 2.125106 CACGGAGTAGCCTTGGCC 60.125 66.667 8.17 0.00 41.61 5.36
2829 3342 3.400054 ACGGAGTAGCCTTGGCCC 61.400 66.667 8.17 1.40 41.94 5.80
2830 3343 4.530857 CGGAGTAGCCTTGGCCCG 62.531 72.222 8.17 10.06 0.00 6.13
2831 3344 4.176752 GGAGTAGCCTTGGCCCGG 62.177 72.222 8.17 1.07 0.00 5.73
2847 3360 3.420943 GGCACGTTGCTCTGTGTT 58.579 55.556 9.31 0.00 44.28 3.32
2848 3361 2.612200 GGCACGTTGCTCTGTGTTA 58.388 52.632 9.31 0.00 44.28 2.41
2849 3362 0.234884 GGCACGTTGCTCTGTGTTAC 59.765 55.000 9.31 0.00 44.28 2.50
2850 3363 0.934496 GCACGTTGCTCTGTGTTACA 59.066 50.000 0.00 0.00 40.96 2.41
2851 3364 1.531149 GCACGTTGCTCTGTGTTACAT 59.469 47.619 0.00 0.00 40.96 2.29
2852 3365 2.032030 GCACGTTGCTCTGTGTTACATT 60.032 45.455 0.00 0.00 40.96 2.71
2853 3366 3.544651 CACGTTGCTCTGTGTTACATTG 58.455 45.455 0.00 0.00 0.00 2.82
2854 3367 3.002246 CACGTTGCTCTGTGTTACATTGT 59.998 43.478 0.00 0.00 0.00 2.71
2855 3368 3.002246 ACGTTGCTCTGTGTTACATTGTG 59.998 43.478 0.00 0.00 0.00 3.33
2856 3369 3.247411 CGTTGCTCTGTGTTACATTGTGA 59.753 43.478 0.00 0.00 0.00 3.58
2857 3370 4.527564 GTTGCTCTGTGTTACATTGTGAC 58.472 43.478 4.84 4.84 0.00 3.67
2858 3371 3.802866 TGCTCTGTGTTACATTGTGACA 58.197 40.909 10.08 10.08 29.78 3.58
2859 3372 3.809279 TGCTCTGTGTTACATTGTGACAG 59.191 43.478 14.03 14.36 32.91 3.51
2860 3373 3.187227 GCTCTGTGTTACATTGTGACAGG 59.813 47.826 14.03 10.38 32.91 4.00
2861 3374 4.380531 CTCTGTGTTACATTGTGACAGGT 58.619 43.478 14.03 0.00 32.91 4.00
2862 3375 4.126437 TCTGTGTTACATTGTGACAGGTG 58.874 43.478 14.03 8.01 32.91 4.00
2863 3376 4.126437 CTGTGTTACATTGTGACAGGTGA 58.874 43.478 14.03 0.01 32.91 4.02
2864 3377 4.126437 TGTGTTACATTGTGACAGGTGAG 58.874 43.478 14.03 0.00 32.91 3.51
2865 3378 3.058914 GTGTTACATTGTGACAGGTGAGC 60.059 47.826 14.03 0.00 32.91 4.26
2866 3379 3.181455 TGTTACATTGTGACAGGTGAGCT 60.181 43.478 10.08 0.00 29.04 4.09
2867 3380 1.888215 ACATTGTGACAGGTGAGCTG 58.112 50.000 10.51 10.51 0.00 4.24
2868 3381 1.417517 ACATTGTGACAGGTGAGCTGA 59.582 47.619 19.57 0.00 0.00 4.26
2869 3382 2.039480 ACATTGTGACAGGTGAGCTGAT 59.961 45.455 19.57 2.42 0.00 2.90
2870 3383 2.936919 TTGTGACAGGTGAGCTGATT 57.063 45.000 19.57 0.00 0.00 2.57
2871 3384 2.462456 TGTGACAGGTGAGCTGATTC 57.538 50.000 19.57 6.98 0.00 2.52
2872 3385 1.973515 TGTGACAGGTGAGCTGATTCT 59.026 47.619 19.57 0.00 0.00 2.40
2873 3386 2.028658 TGTGACAGGTGAGCTGATTCTC 60.029 50.000 19.57 5.86 0.00 2.87
2874 3387 1.552337 TGACAGGTGAGCTGATTCTCC 59.448 52.381 19.57 1.08 32.22 3.71
2875 3388 0.908198 ACAGGTGAGCTGATTCTCCC 59.092 55.000 19.57 0.00 32.42 4.30
2876 3389 1.202330 CAGGTGAGCTGATTCTCCCT 58.798 55.000 5.59 0.00 35.52 4.20
2877 3390 1.138661 CAGGTGAGCTGATTCTCCCTC 59.861 57.143 5.59 0.00 34.02 4.30
2878 3391 0.467804 GGTGAGCTGATTCTCCCTCC 59.532 60.000 0.00 0.00 32.22 4.30
2879 3392 1.494960 GTGAGCTGATTCTCCCTCCT 58.505 55.000 0.00 0.00 32.22 3.69
2880 3393 1.412343 GTGAGCTGATTCTCCCTCCTC 59.588 57.143 0.00 0.00 32.22 3.71
2881 3394 1.290431 TGAGCTGATTCTCCCTCCTCT 59.710 52.381 0.00 0.00 32.22 3.69
2882 3395 2.292785 TGAGCTGATTCTCCCTCCTCTT 60.293 50.000 0.00 0.00 32.22 2.85
2883 3396 2.365293 GAGCTGATTCTCCCTCCTCTTC 59.635 54.545 0.00 0.00 0.00 2.87
2884 3397 1.416030 GCTGATTCTCCCTCCTCTTCC 59.584 57.143 0.00 0.00 0.00 3.46
2885 3398 2.046292 CTGATTCTCCCTCCTCTTCCC 58.954 57.143 0.00 0.00 0.00 3.97
2886 3399 1.044611 GATTCTCCCTCCTCTTCCCG 58.955 60.000 0.00 0.00 0.00 5.14
2887 3400 1.051556 ATTCTCCCTCCTCTTCCCGC 61.052 60.000 0.00 0.00 0.00 6.13
2888 3401 2.364317 CTCCCTCCTCTTCCCGCA 60.364 66.667 0.00 0.00 0.00 5.69
2889 3402 2.364317 TCCCTCCTCTTCCCGCAG 60.364 66.667 0.00 0.00 0.00 5.18
2890 3403 2.685380 CCCTCCTCTTCCCGCAGT 60.685 66.667 0.00 0.00 0.00 4.40
2891 3404 2.726351 CCCTCCTCTTCCCGCAGTC 61.726 68.421 0.00 0.00 0.00 3.51
2892 3405 1.984570 CCTCCTCTTCCCGCAGTCA 60.985 63.158 0.00 0.00 0.00 3.41
2893 3406 1.544825 CCTCCTCTTCCCGCAGTCAA 61.545 60.000 0.00 0.00 0.00 3.18
2894 3407 0.321671 CTCCTCTTCCCGCAGTCAAA 59.678 55.000 0.00 0.00 0.00 2.69
2895 3408 0.762418 TCCTCTTCCCGCAGTCAAAA 59.238 50.000 0.00 0.00 0.00 2.44
2896 3409 1.351017 TCCTCTTCCCGCAGTCAAAAT 59.649 47.619 0.00 0.00 0.00 1.82
2897 3410 2.162681 CCTCTTCCCGCAGTCAAAATT 58.837 47.619 0.00 0.00 0.00 1.82
2898 3411 2.095059 CCTCTTCCCGCAGTCAAAATTG 60.095 50.000 0.00 0.00 0.00 2.32
2899 3412 2.554032 CTCTTCCCGCAGTCAAAATTGT 59.446 45.455 0.00 0.00 0.00 2.71
2900 3413 2.955660 TCTTCCCGCAGTCAAAATTGTT 59.044 40.909 0.00 0.00 0.00 2.83
2901 3414 3.383185 TCTTCCCGCAGTCAAAATTGTTT 59.617 39.130 0.00 0.00 0.00 2.83
2902 3415 3.090952 TCCCGCAGTCAAAATTGTTTG 57.909 42.857 0.00 0.00 44.71 2.93
2918 3431 4.750952 TGTTTGAAACAACACGTTGAGA 57.249 36.364 16.48 0.00 42.93 3.27
2919 3432 5.303747 TGTTTGAAACAACACGTTGAGAT 57.696 34.783 16.48 2.28 42.93 2.75
2920 3433 5.704888 TGTTTGAAACAACACGTTGAGATT 58.295 33.333 16.48 8.16 42.93 2.40
2921 3434 5.797934 TGTTTGAAACAACACGTTGAGATTC 59.202 36.000 16.48 15.42 42.93 2.52
2922 3435 5.553290 TTGAAACAACACGTTGAGATTCA 57.447 34.783 16.48 17.32 42.93 2.57
2923 3436 5.155509 TGAAACAACACGTTGAGATTCAG 57.844 39.130 16.48 0.00 42.93 3.02
2924 3437 3.609103 AACAACACGTTGAGATTCAGC 57.391 42.857 16.48 0.00 42.93 4.26
2925 3438 1.873591 ACAACACGTTGAGATTCAGCC 59.126 47.619 16.48 0.00 42.93 4.85
2926 3439 1.136252 CAACACGTTGAGATTCAGCCG 60.136 52.381 3.79 0.00 42.93 5.52
2927 3440 0.033504 ACACGTTGAGATTCAGCCGT 59.966 50.000 0.00 1.63 36.62 5.68
2928 3441 0.439985 CACGTTGAGATTCAGCCGTG 59.560 55.000 14.45 14.45 42.53 4.94
2929 3442 0.033504 ACGTTGAGATTCAGCCGTGT 59.966 50.000 5.47 0.00 35.49 4.49
2930 3443 1.271379 ACGTTGAGATTCAGCCGTGTA 59.729 47.619 5.47 0.00 35.49 2.90
2931 3444 1.920574 CGTTGAGATTCAGCCGTGTAG 59.079 52.381 0.00 0.00 0.00 2.74
2932 3445 2.271800 GTTGAGATTCAGCCGTGTAGG 58.728 52.381 0.00 0.00 44.97 3.18
2945 3458 3.536956 CGTGTAGGCAGGGAGATAAAA 57.463 47.619 0.00 0.00 0.00 1.52
2946 3459 3.869065 CGTGTAGGCAGGGAGATAAAAA 58.131 45.455 0.00 0.00 0.00 1.94
2947 3460 4.451900 CGTGTAGGCAGGGAGATAAAAAT 58.548 43.478 0.00 0.00 0.00 1.82
2948 3461 4.511826 CGTGTAGGCAGGGAGATAAAAATC 59.488 45.833 0.00 0.00 0.00 2.17
2949 3462 5.685075 CGTGTAGGCAGGGAGATAAAAATCT 60.685 44.000 0.00 0.00 0.00 2.40
2950 3463 5.760743 GTGTAGGCAGGGAGATAAAAATCTC 59.239 44.000 6.81 6.81 44.75 2.75
2951 3464 4.078639 AGGCAGGGAGATAAAAATCTCG 57.921 45.455 8.80 0.00 46.04 4.04
2958 3471 5.908916 GGAGATAAAAATCTCGCACCTAC 57.091 43.478 8.80 0.00 46.04 3.18
2959 3472 5.602628 GGAGATAAAAATCTCGCACCTACT 58.397 41.667 8.80 0.00 46.04 2.57
2960 3473 6.746120 GGAGATAAAAATCTCGCACCTACTA 58.254 40.000 8.80 0.00 46.04 1.82
2961 3474 6.641723 GGAGATAAAAATCTCGCACCTACTAC 59.358 42.308 8.80 0.00 46.04 2.73
2962 3475 7.349412 AGATAAAAATCTCGCACCTACTACT 57.651 36.000 0.00 0.00 0.00 2.57
2963 3476 7.427214 AGATAAAAATCTCGCACCTACTACTC 58.573 38.462 0.00 0.00 0.00 2.59
2964 3477 5.662674 AAAAATCTCGCACCTACTACTCT 57.337 39.130 0.00 0.00 0.00 3.24
2965 3478 6.770746 AAAAATCTCGCACCTACTACTCTA 57.229 37.500 0.00 0.00 0.00 2.43
2966 3479 5.754543 AAATCTCGCACCTACTACTCTAC 57.245 43.478 0.00 0.00 0.00 2.59
2967 3480 4.693042 ATCTCGCACCTACTACTCTACT 57.307 45.455 0.00 0.00 0.00 2.57
2968 3481 5.804944 ATCTCGCACCTACTACTCTACTA 57.195 43.478 0.00 0.00 0.00 1.82
2969 3482 5.199024 TCTCGCACCTACTACTCTACTAG 57.801 47.826 0.00 0.00 0.00 2.57
2970 3483 4.648762 TCTCGCACCTACTACTCTACTAGT 59.351 45.833 0.00 0.00 42.62 2.57
2971 3484 5.830457 TCTCGCACCTACTACTCTACTAGTA 59.170 44.000 1.89 1.89 39.80 1.82
2972 3485 5.837437 TCGCACCTACTACTCTACTAGTAC 58.163 45.833 0.00 0.00 39.80 2.73
2973 3486 5.360999 TCGCACCTACTACTCTACTAGTACA 59.639 44.000 0.00 0.00 39.80 2.90
2974 3487 6.041409 TCGCACCTACTACTCTACTAGTACAT 59.959 42.308 0.00 0.00 39.80 2.29
2975 3488 6.365789 CGCACCTACTACTCTACTAGTACATC 59.634 46.154 0.00 0.00 39.80 3.06
2976 3489 7.215789 GCACCTACTACTCTACTAGTACATCA 58.784 42.308 0.00 0.00 39.80 3.07
2977 3490 7.385752 GCACCTACTACTCTACTAGTACATCAG 59.614 44.444 0.00 0.00 39.80 2.90
2978 3491 8.640651 CACCTACTACTCTACTAGTACATCAGA 58.359 40.741 0.00 0.00 39.80 3.27
2979 3492 9.383578 ACCTACTACTCTACTAGTACATCAGAT 57.616 37.037 0.00 0.00 39.80 2.90
2980 3493 9.647797 CCTACTACTCTACTAGTACATCAGATG 57.352 40.741 9.03 9.03 39.80 2.90
2983 3496 9.719355 ACTACTCTACTAGTACATCAGATGATG 57.281 37.037 17.81 18.91 46.34 3.07
2984 3497 8.554835 TACTCTACTAGTACATCAGATGATGC 57.445 38.462 20.12 7.37 45.67 3.91
2985 3498 7.608376 TACTCTACTAGTACATCAGATGATGCC 59.392 40.741 20.12 12.28 45.67 4.40
2990 3503 1.947013 CATCAGATGATGCCGTGCC 59.053 57.895 9.73 0.00 44.44 5.01
2991 3504 1.596203 ATCAGATGATGCCGTGCCG 60.596 57.895 0.00 0.00 32.68 5.69
3012 3525 3.108289 CGCTGCTCGGTGACAGTG 61.108 66.667 0.00 0.00 37.99 3.66
3013 3526 2.340078 GCTGCTCGGTGACAGTGA 59.660 61.111 0.00 0.00 36.26 3.41
3014 3527 1.079543 GCTGCTCGGTGACAGTGAT 60.080 57.895 0.00 0.00 36.26 3.06
3015 3528 1.357258 GCTGCTCGGTGACAGTGATG 61.357 60.000 0.00 0.00 36.26 3.07
3016 3529 0.738762 CTGCTCGGTGACAGTGATGG 60.739 60.000 0.00 0.00 0.00 3.51
3017 3530 1.184970 TGCTCGGTGACAGTGATGGA 61.185 55.000 0.00 0.00 0.00 3.41
3018 3531 0.176680 GCTCGGTGACAGTGATGGAT 59.823 55.000 0.00 0.00 0.00 3.41
3019 3532 1.931906 CTCGGTGACAGTGATGGATG 58.068 55.000 0.00 0.00 0.00 3.51
3020 3533 0.536724 TCGGTGACAGTGATGGATGG 59.463 55.000 0.00 0.00 0.00 3.51
3021 3534 0.462581 CGGTGACAGTGATGGATGGG 60.463 60.000 0.00 0.00 0.00 4.00
3022 3535 0.911769 GGTGACAGTGATGGATGGGA 59.088 55.000 0.00 0.00 0.00 4.37
3023 3536 1.281867 GGTGACAGTGATGGATGGGAA 59.718 52.381 0.00 0.00 0.00 3.97
3024 3537 2.636830 GTGACAGTGATGGATGGGAAG 58.363 52.381 0.00 0.00 0.00 3.46
3025 3538 2.237143 GTGACAGTGATGGATGGGAAGA 59.763 50.000 0.00 0.00 0.00 2.87
3026 3539 2.912295 TGACAGTGATGGATGGGAAGAA 59.088 45.455 0.00 0.00 0.00 2.52
3027 3540 3.054875 TGACAGTGATGGATGGGAAGAAG 60.055 47.826 0.00 0.00 0.00 2.85
3028 3541 2.295885 CAGTGATGGATGGGAAGAAGC 58.704 52.381 0.00 0.00 0.00 3.86
3029 3542 2.092538 CAGTGATGGATGGGAAGAAGCT 60.093 50.000 0.00 0.00 0.00 3.74
3030 3543 2.092538 AGTGATGGATGGGAAGAAGCTG 60.093 50.000 0.00 0.00 0.00 4.24
3031 3544 1.918262 TGATGGATGGGAAGAAGCTGT 59.082 47.619 0.00 0.00 0.00 4.40
3032 3545 2.092753 TGATGGATGGGAAGAAGCTGTC 60.093 50.000 0.00 0.00 0.00 3.51
3033 3546 0.620556 TGGATGGGAAGAAGCTGTCC 59.379 55.000 3.26 3.26 0.00 4.02
3036 3549 2.269241 GGGAAGAAGCTGTCCCCG 59.731 66.667 16.39 0.00 46.96 5.73
3037 3550 2.291043 GGGAAGAAGCTGTCCCCGA 61.291 63.158 16.39 0.00 46.96 5.14
3038 3551 1.677552 GGAAGAAGCTGTCCCCGAA 59.322 57.895 0.00 0.00 0.00 4.30
3039 3552 0.391793 GGAAGAAGCTGTCCCCGAAG 60.392 60.000 0.00 0.00 0.00 3.79
3040 3553 0.608640 GAAGAAGCTGTCCCCGAAGA 59.391 55.000 0.00 0.00 0.00 2.87
3041 3554 1.208293 GAAGAAGCTGTCCCCGAAGAT 59.792 52.381 0.00 0.00 0.00 2.40
3042 3555 0.539051 AGAAGCTGTCCCCGAAGATG 59.461 55.000 0.00 0.00 0.00 2.90
3043 3556 0.537188 GAAGCTGTCCCCGAAGATGA 59.463 55.000 0.00 0.00 0.00 2.92
3044 3557 0.250513 AAGCTGTCCCCGAAGATGAC 59.749 55.000 0.00 0.00 0.00 3.06
3045 3558 1.519455 GCTGTCCCCGAAGATGACG 60.519 63.158 0.00 0.00 32.00 4.35
3052 3565 3.226884 CCGAAGATGACGGGTGTTT 57.773 52.632 0.00 0.00 45.65 2.83
3053 3566 1.519408 CCGAAGATGACGGGTGTTTT 58.481 50.000 0.00 0.00 45.65 2.43
3054 3567 1.196808 CCGAAGATGACGGGTGTTTTG 59.803 52.381 0.00 0.00 45.65 2.44
3055 3568 1.871039 CGAAGATGACGGGTGTTTTGT 59.129 47.619 0.00 0.00 0.00 2.83
3056 3569 2.289547 CGAAGATGACGGGTGTTTTGTT 59.710 45.455 0.00 0.00 0.00 2.83
3057 3570 3.242936 CGAAGATGACGGGTGTTTTGTTT 60.243 43.478 0.00 0.00 0.00 2.83
3058 3571 3.982576 AGATGACGGGTGTTTTGTTTC 57.017 42.857 0.00 0.00 0.00 2.78
3059 3572 3.551846 AGATGACGGGTGTTTTGTTTCT 58.448 40.909 0.00 0.00 0.00 2.52
3060 3573 3.315191 AGATGACGGGTGTTTTGTTTCTG 59.685 43.478 0.00 0.00 0.00 3.02
3061 3574 2.438411 TGACGGGTGTTTTGTTTCTGT 58.562 42.857 0.00 0.00 0.00 3.41
3062 3575 2.820787 TGACGGGTGTTTTGTTTCTGTT 59.179 40.909 0.00 0.00 0.00 3.16
3063 3576 3.175929 GACGGGTGTTTTGTTTCTGTTG 58.824 45.455 0.00 0.00 0.00 3.33
3064 3577 2.559231 ACGGGTGTTTTGTTTCTGTTGT 59.441 40.909 0.00 0.00 0.00 3.32
3065 3578 3.006003 ACGGGTGTTTTGTTTCTGTTGTT 59.994 39.130 0.00 0.00 0.00 2.83
3066 3579 3.366422 CGGGTGTTTTGTTTCTGTTGTTG 59.634 43.478 0.00 0.00 0.00 3.33
3067 3580 4.561105 GGGTGTTTTGTTTCTGTTGTTGA 58.439 39.130 0.00 0.00 0.00 3.18
3068 3581 4.625311 GGGTGTTTTGTTTCTGTTGTTGAG 59.375 41.667 0.00 0.00 0.00 3.02
3069 3582 4.625311 GGTGTTTTGTTTCTGTTGTTGAGG 59.375 41.667 0.00 0.00 0.00 3.86
3070 3583 4.625311 GTGTTTTGTTTCTGTTGTTGAGGG 59.375 41.667 0.00 0.00 0.00 4.30
3071 3584 4.180817 GTTTTGTTTCTGTTGTTGAGGGG 58.819 43.478 0.00 0.00 0.00 4.79
3072 3585 3.374042 TTGTTTCTGTTGTTGAGGGGA 57.626 42.857 0.00 0.00 0.00 4.81
3073 3586 2.930950 TGTTTCTGTTGTTGAGGGGAG 58.069 47.619 0.00 0.00 0.00 4.30
3074 3587 2.507886 TGTTTCTGTTGTTGAGGGGAGA 59.492 45.455 0.00 0.00 0.00 3.71
3075 3588 3.053991 TGTTTCTGTTGTTGAGGGGAGAA 60.054 43.478 0.00 0.00 0.00 2.87
3076 3589 4.145052 GTTTCTGTTGTTGAGGGGAGAAT 58.855 43.478 0.00 0.00 0.00 2.40
3077 3590 3.703001 TCTGTTGTTGAGGGGAGAATC 57.297 47.619 0.00 0.00 0.00 2.52
3091 3604 3.878160 GAGAATCCAGGAAGACGAGTT 57.122 47.619 0.00 0.00 0.00 3.01
3092 3605 4.195225 GAGAATCCAGGAAGACGAGTTT 57.805 45.455 0.00 0.00 0.00 2.66
3093 3606 3.929610 GAGAATCCAGGAAGACGAGTTTG 59.070 47.826 0.00 0.00 0.00 2.93
3094 3607 3.578716 AGAATCCAGGAAGACGAGTTTGA 59.421 43.478 0.00 0.00 0.00 2.69
3095 3608 3.601443 ATCCAGGAAGACGAGTTTGAG 57.399 47.619 0.00 0.00 0.00 3.02
3096 3609 2.317040 TCCAGGAAGACGAGTTTGAGT 58.683 47.619 0.00 0.00 0.00 3.41
3097 3610 2.035961 TCCAGGAAGACGAGTTTGAGTG 59.964 50.000 0.00 0.00 0.00 3.51
3098 3611 2.035961 CCAGGAAGACGAGTTTGAGTGA 59.964 50.000 0.00 0.00 0.00 3.41
3099 3612 3.053455 CAGGAAGACGAGTTTGAGTGAC 58.947 50.000 0.00 0.00 0.00 3.67
3100 3613 2.693591 AGGAAGACGAGTTTGAGTGACA 59.306 45.455 0.00 0.00 0.00 3.58
3101 3614 2.795470 GGAAGACGAGTTTGAGTGACAC 59.205 50.000 0.00 0.00 0.00 3.67
3102 3615 3.491104 GGAAGACGAGTTTGAGTGACACT 60.491 47.826 8.12 8.12 0.00 3.55
3103 3616 3.085443 AGACGAGTTTGAGTGACACTG 57.915 47.619 14.14 0.00 0.00 3.66
3104 3617 1.523095 GACGAGTTTGAGTGACACTGC 59.477 52.381 14.14 5.51 0.00 4.40
3105 3618 1.137086 ACGAGTTTGAGTGACACTGCT 59.863 47.619 14.14 5.61 0.00 4.24
3106 3619 2.205074 CGAGTTTGAGTGACACTGCTT 58.795 47.619 14.14 0.00 0.00 3.91
3107 3620 2.219674 CGAGTTTGAGTGACACTGCTTC 59.780 50.000 14.14 0.00 0.00 3.86
3108 3621 3.462021 GAGTTTGAGTGACACTGCTTCT 58.538 45.455 14.14 6.27 0.00 2.85
3109 3622 3.462021 AGTTTGAGTGACACTGCTTCTC 58.538 45.455 14.14 0.00 0.00 2.87
3110 3623 2.140065 TTGAGTGACACTGCTTCTCG 57.860 50.000 14.14 0.00 0.00 4.04
3111 3624 0.319040 TGAGTGACACTGCTTCTCGC 60.319 55.000 14.14 0.00 39.77 5.03
3112 3625 1.005630 AGTGACACTGCTTCTCGCC 60.006 57.895 7.47 0.00 38.05 5.54
3113 3626 1.005630 GTGACACTGCTTCTCGCCT 60.006 57.895 0.00 0.00 38.05 5.52
3114 3627 1.011451 GTGACACTGCTTCTCGCCTC 61.011 60.000 0.00 0.00 38.05 4.70
3115 3628 1.181741 TGACACTGCTTCTCGCCTCT 61.182 55.000 0.00 0.00 38.05 3.69
3116 3629 0.735632 GACACTGCTTCTCGCCTCTG 60.736 60.000 0.00 0.00 38.05 3.35
3117 3630 1.291588 CACTGCTTCTCGCCTCTGT 59.708 57.895 0.00 0.00 38.05 3.41
3118 3631 0.320247 CACTGCTTCTCGCCTCTGTT 60.320 55.000 0.00 0.00 38.05 3.16
3119 3632 0.394565 ACTGCTTCTCGCCTCTGTTT 59.605 50.000 0.00 0.00 38.05 2.83
3120 3633 1.202698 ACTGCTTCTCGCCTCTGTTTT 60.203 47.619 0.00 0.00 38.05 2.43
3121 3634 1.876156 CTGCTTCTCGCCTCTGTTTTT 59.124 47.619 0.00 0.00 38.05 1.94
3122 3635 1.603802 TGCTTCTCGCCTCTGTTTTTG 59.396 47.619 0.00 0.00 38.05 2.44
3123 3636 1.873591 GCTTCTCGCCTCTGTTTTTGA 59.126 47.619 0.00 0.00 0.00 2.69
3124 3637 2.485814 GCTTCTCGCCTCTGTTTTTGAT 59.514 45.455 0.00 0.00 0.00 2.57
3125 3638 3.669023 GCTTCTCGCCTCTGTTTTTGATG 60.669 47.826 0.00 0.00 0.00 3.07
3126 3639 3.401033 TCTCGCCTCTGTTTTTGATGA 57.599 42.857 0.00 0.00 0.00 2.92
3127 3640 3.738982 TCTCGCCTCTGTTTTTGATGAA 58.261 40.909 0.00 0.00 0.00 2.57
3128 3641 4.326826 TCTCGCCTCTGTTTTTGATGAAT 58.673 39.130 0.00 0.00 0.00 2.57
3129 3642 5.487433 TCTCGCCTCTGTTTTTGATGAATA 58.513 37.500 0.00 0.00 0.00 1.75
3130 3643 5.937540 TCTCGCCTCTGTTTTTGATGAATAA 59.062 36.000 0.00 0.00 0.00 1.40
3131 3644 6.429692 TCTCGCCTCTGTTTTTGATGAATAAA 59.570 34.615 0.00 0.00 0.00 1.40
3132 3645 6.611381 TCGCCTCTGTTTTTGATGAATAAAG 58.389 36.000 0.00 0.00 0.00 1.85
3133 3646 5.287035 CGCCTCTGTTTTTGATGAATAAAGC 59.713 40.000 0.00 0.00 0.00 3.51
3134 3647 6.393171 GCCTCTGTTTTTGATGAATAAAGCT 58.607 36.000 0.00 0.00 0.00 3.74
3135 3648 6.870439 GCCTCTGTTTTTGATGAATAAAGCTT 59.130 34.615 0.00 0.00 0.00 3.74
3136 3649 7.148689 GCCTCTGTTTTTGATGAATAAAGCTTG 60.149 37.037 0.00 0.00 0.00 4.01
3137 3650 7.330208 CCTCTGTTTTTGATGAATAAAGCTTGG 59.670 37.037 0.00 0.00 0.00 3.61
3138 3651 7.950512 TCTGTTTTTGATGAATAAAGCTTGGA 58.049 30.769 0.00 0.00 0.00 3.53
3139 3652 8.587608 TCTGTTTTTGATGAATAAAGCTTGGAT 58.412 29.630 0.00 0.00 0.00 3.41
3140 3653 9.211485 CTGTTTTTGATGAATAAAGCTTGGATT 57.789 29.630 0.00 2.82 0.00 3.01
3143 3656 9.651913 TTTTTGATGAATAAAGCTTGGATTACC 57.348 29.630 0.00 0.00 0.00 2.85
3144 3657 7.953005 TTGATGAATAAAGCTTGGATTACCA 57.047 32.000 0.00 0.00 45.34 3.25
3145 3658 8.537728 TTGATGAATAAAGCTTGGATTACCAT 57.462 30.769 0.00 4.26 46.34 3.55
3146 3659 8.537728 TGATGAATAAAGCTTGGATTACCATT 57.462 30.769 0.00 0.00 46.34 3.16
3147 3660 9.639563 TGATGAATAAAGCTTGGATTACCATTA 57.360 29.630 0.00 0.00 46.34 1.90
3175 3688 9.528489 AAAAACTAATTAAGAGGTATCCTTGCA 57.472 29.630 0.00 0.00 31.76 4.08
3176 3689 9.528489 AAAACTAATTAAGAGGTATCCTTGCAA 57.472 29.630 0.00 0.00 31.76 4.08
3177 3690 9.528489 AAACTAATTAAGAGGTATCCTTGCAAA 57.472 29.630 0.00 0.00 31.76 3.68
3178 3691 8.738645 ACTAATTAAGAGGTATCCTTGCAAAG 57.261 34.615 0.00 0.00 45.69 2.77
3188 3701 3.419793 CTTGCAAAGGTCACTCCCA 57.580 52.632 0.00 0.00 41.27 4.37
3189 3702 1.915141 CTTGCAAAGGTCACTCCCAT 58.085 50.000 0.00 0.00 41.27 4.00
3190 3703 1.815003 CTTGCAAAGGTCACTCCCATC 59.185 52.381 0.00 0.00 41.27 3.51
3191 3704 1.067295 TGCAAAGGTCACTCCCATCT 58.933 50.000 0.00 0.00 36.75 2.90
3192 3705 1.425066 TGCAAAGGTCACTCCCATCTT 59.575 47.619 0.00 0.00 36.75 2.40
3193 3706 2.087646 GCAAAGGTCACTCCCATCTTC 58.912 52.381 0.00 0.00 36.75 2.87
3194 3707 2.290577 GCAAAGGTCACTCCCATCTTCT 60.291 50.000 0.00 0.00 36.75 2.85
3195 3708 3.604582 CAAAGGTCACTCCCATCTTCTC 58.395 50.000 0.00 0.00 36.75 2.87
3196 3709 2.938428 AGGTCACTCCCATCTTCTCT 57.062 50.000 0.00 0.00 36.75 3.10
3197 3710 3.197927 AGGTCACTCCCATCTTCTCTT 57.802 47.619 0.00 0.00 36.75 2.85
3198 3711 2.836981 AGGTCACTCCCATCTTCTCTTG 59.163 50.000 0.00 0.00 36.75 3.02
3199 3712 2.569404 GGTCACTCCCATCTTCTCTTGT 59.431 50.000 0.00 0.00 0.00 3.16
3200 3713 3.594134 GTCACTCCCATCTTCTCTTGTG 58.406 50.000 0.00 0.00 0.00 3.33
3201 3714 2.568956 TCACTCCCATCTTCTCTTGTGG 59.431 50.000 0.00 0.00 0.00 4.17
3202 3715 2.304180 CACTCCCATCTTCTCTTGTGGT 59.696 50.000 0.00 0.00 0.00 4.16
3203 3716 2.982488 ACTCCCATCTTCTCTTGTGGTT 59.018 45.455 0.00 0.00 0.00 3.67
3204 3717 3.244700 ACTCCCATCTTCTCTTGTGGTTG 60.245 47.826 0.00 0.00 0.00 3.77
3205 3718 2.978978 TCCCATCTTCTCTTGTGGTTGA 59.021 45.455 0.00 0.00 0.00 3.18
3206 3719 3.077359 CCCATCTTCTCTTGTGGTTGAC 58.923 50.000 0.00 0.00 0.00 3.18
3207 3720 3.496692 CCCATCTTCTCTTGTGGTTGACA 60.497 47.826 0.00 0.00 0.00 3.58
3208 3721 4.136796 CCATCTTCTCTTGTGGTTGACAA 58.863 43.478 0.00 0.00 42.55 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 58 2.224066 CCCGAGACAGTGATGGATAACC 60.224 54.545 0.00 0.00 0.00 2.85
61 63 0.251608 TGACCCGAGACAGTGATGGA 60.252 55.000 0.00 0.00 0.00 3.41
67 69 1.546476 GAGATTGTGACCCGAGACAGT 59.454 52.381 0.00 0.00 0.00 3.55
96 98 6.758886 AGAAGGTTCTGCAGAAATATAACTCG 59.241 38.462 29.99 0.00 35.89 4.18
166 168 4.927978 AGGAAAGATGGATAGAGACACG 57.072 45.455 0.00 0.00 0.00 4.49
228 232 2.743664 GGGTCAAAGTTATTACGCGGTT 59.256 45.455 12.47 0.00 0.00 4.44
372 377 1.610102 CCTCTCAGTTGCTGTCAAGGG 60.610 57.143 0.00 0.00 31.93 3.95
419 464 4.530710 ACTTGGCGATCTTACTTGTACA 57.469 40.909 0.00 0.00 0.00 2.90
454 499 6.106003 CACAATTCTAAAATAACCCCAAGCC 58.894 40.000 0.00 0.00 0.00 4.35
611 925 2.253603 GCTGCCGTATTTTCTGCAAAG 58.746 47.619 0.00 0.00 32.58 2.77
614 928 1.643868 CGGCTGCCGTATTTTCTGCA 61.644 55.000 31.72 0.00 42.73 4.41
615 929 1.062525 CGGCTGCCGTATTTTCTGC 59.937 57.895 31.72 0.00 42.73 4.26
616 930 0.742990 TCCGGCTGCCGTATTTTCTG 60.743 55.000 35.82 19.88 46.80 3.02
617 931 0.035820 TTCCGGCTGCCGTATTTTCT 60.036 50.000 35.82 0.00 46.80 2.52
675 998 0.988832 TCTTTCGGGCCTACCAATGT 59.011 50.000 0.84 0.00 40.22 2.71
771 1094 9.402962 TGGCAAACCCAATTTAAGGAGATCCTA 62.403 40.741 0.81 0.00 43.17 2.94
772 1095 8.695207 TGGCAAACCCAATTTAAGGAGATCCT 62.695 42.308 0.00 0.00 44.93 3.24
773 1096 4.141937 GGCAAACCCAATTTAAGGAGATCC 60.142 45.833 0.00 0.00 0.00 3.36
774 1097 4.466015 TGGCAAACCCAATTTAAGGAGATC 59.534 41.667 0.00 0.00 41.82 2.75
775 1098 4.424842 TGGCAAACCCAATTTAAGGAGAT 58.575 39.130 0.00 0.00 41.82 2.75
776 1099 3.850752 TGGCAAACCCAATTTAAGGAGA 58.149 40.909 0.00 0.00 41.82 3.71
788 1111 0.972471 CCAAGGGAGATGGCAAACCC 60.972 60.000 15.88 15.88 42.36 4.11
810 1133 2.176889 TGCTAGTGGGGTAGTCAGTTC 58.823 52.381 0.00 0.00 0.00 3.01
814 1137 2.848678 AGATGCTAGTGGGGTAGTCA 57.151 50.000 0.00 0.00 0.00 3.41
815 1138 3.031736 TGAAGATGCTAGTGGGGTAGTC 58.968 50.000 0.00 0.00 0.00 2.59
840 1176 0.987294 TTTCTCAGGAGGGGAAGCAG 59.013 55.000 0.00 0.00 0.00 4.24
841 1177 1.352352 CTTTTCTCAGGAGGGGAAGCA 59.648 52.381 0.00 0.00 0.00 3.91
842 1178 1.630878 TCTTTTCTCAGGAGGGGAAGC 59.369 52.381 0.00 0.00 0.00 3.86
843 1179 3.177228 TCTCTTTTCTCAGGAGGGGAAG 58.823 50.000 0.00 0.00 0.00 3.46
883 1219 1.541147 CCCAAGAATCAAAGCAAGCGA 59.459 47.619 0.00 0.00 0.00 4.93
885 1221 1.895131 TCCCCAAGAATCAAAGCAAGC 59.105 47.619 0.00 0.00 0.00 4.01
936 1272 0.318445 CTGCTCAAACCTGCTTGCAC 60.318 55.000 0.00 0.00 0.00 4.57
954 1290 5.068215 TGAGGGAGTTCTTATAGCTAGCT 57.932 43.478 23.12 23.12 0.00 3.32
975 1311 2.893637 AGAAACAAGACCGATCCGATG 58.106 47.619 0.00 0.00 0.00 3.84
984 1320 2.029918 GGTCATGGCAAGAAACAAGACC 60.030 50.000 0.00 3.73 44.82 3.85
999 1346 1.344953 TGGAATCCCCTCCGGTCATG 61.345 60.000 0.00 0.00 38.44 3.07
1090 1437 0.766674 TCCTTACCACCACCAGCAGT 60.767 55.000 0.00 0.00 0.00 4.40
1123 1473 0.324943 ACCAGATCGGACCCAAACAG 59.675 55.000 10.05 0.00 38.63 3.16
1170 1520 3.731728 GGGTGAGATGCAGGGCCA 61.732 66.667 6.18 0.00 0.00 5.36
1171 1521 2.988839 AAGGGTGAGATGCAGGGCC 61.989 63.158 0.00 0.00 0.00 5.80
1172 1522 1.751927 CAAGGGTGAGATGCAGGGC 60.752 63.158 0.00 0.00 0.00 5.19
1268 1621 0.572590 CATGTCCTCGAATTCGACGC 59.427 55.000 25.96 17.79 44.22 5.19
1350 1703 2.680352 TCCTCCTCTGCACCGGAC 60.680 66.667 9.46 0.00 0.00 4.79
1362 1715 0.467804 GCACCATCTCTTCCTCCTCC 59.532 60.000 0.00 0.00 0.00 4.30
1381 1734 1.672356 CTTCGGCAACAGGGGAGTG 60.672 63.158 0.00 0.00 0.00 3.51
1408 1761 0.626382 ATCACCTCGTCCTCCTCAGA 59.374 55.000 0.00 0.00 0.00 3.27
1409 1762 0.743688 CATCACCTCGTCCTCCTCAG 59.256 60.000 0.00 0.00 0.00 3.35
1680 2033 3.601443 AGGAAAGAGTGATCAACCTCG 57.399 47.619 0.00 0.00 0.00 4.63
1705 2058 8.911247 ATTAAAGTGGCGAATTAATTCAAGAC 57.089 30.769 24.23 16.73 36.61 3.01
1720 2073 3.003480 ACAGCGAGAAGATTAAAGTGGC 58.997 45.455 0.00 0.00 0.00 5.01
1737 2100 0.811281 GCATGTGGTTAGGGAACAGC 59.189 55.000 0.00 0.00 37.29 4.40
1750 2114 3.313526 GGCTATAGTTGTTGGAGCATGTG 59.686 47.826 0.84 0.00 34.76 3.21
1759 2123 9.998106 ACCAAAGTATATAGGCTATAGTTGTTG 57.002 33.333 18.43 17.17 0.00 3.33
1833 2235 6.383436 TGATCAAATTCTATTCCAATTGGGCA 59.617 34.615 24.29 11.91 36.21 5.36
1834 2236 6.819284 TGATCAAATTCTATTCCAATTGGGC 58.181 36.000 24.29 0.00 36.21 5.36
1835 2237 7.386848 GCATGATCAAATTCTATTCCAATTGGG 59.613 37.037 24.29 8.35 35.41 4.12
1836 2238 8.148351 AGCATGATCAAATTCTATTCCAATTGG 58.852 33.333 19.08 19.08 0.00 3.16
1837 2239 9.542462 AAGCATGATCAAATTCTATTCCAATTG 57.458 29.630 0.00 0.00 0.00 2.32
1838 2240 9.760077 GAAGCATGATCAAATTCTATTCCAATT 57.240 29.630 0.00 0.00 0.00 2.32
1839 2241 9.144298 AGAAGCATGATCAAATTCTATTCCAAT 57.856 29.630 15.10 0.00 0.00 3.16
1840 2242 8.529424 AGAAGCATGATCAAATTCTATTCCAA 57.471 30.769 15.10 0.00 0.00 3.53
1841 2243 8.529424 AAGAAGCATGATCAAATTCTATTCCA 57.471 30.769 16.34 0.00 30.30 3.53
1842 2244 9.460906 GAAAGAAGCATGATCAAATTCTATTCC 57.539 33.333 16.34 6.81 30.30 3.01
1898 2320 6.239008 GCTTTGGCCTGATAAAATATACAGCA 60.239 38.462 3.32 0.00 0.00 4.41
1899 2321 6.152379 GCTTTGGCCTGATAAAATATACAGC 58.848 40.000 3.32 0.00 0.00 4.40
1927 2349 2.170817 GGCCGTTTTCTCCCTATTCTCT 59.829 50.000 0.00 0.00 0.00 3.10
1944 2366 4.415150 ATCAGGTGCAGTGGGCCG 62.415 66.667 0.00 0.00 43.89 6.13
2015 2440 4.386652 CCCAAAATGAAATTCTTCACTGCG 59.613 41.667 0.00 0.00 44.28 5.18
2019 2444 3.679502 CGCCCCAAAATGAAATTCTTCAC 59.320 43.478 0.00 0.00 44.28 3.18
2020 2445 3.306641 CCGCCCCAAAATGAAATTCTTCA 60.307 43.478 0.00 0.00 45.53 3.02
2055 2481 2.752903 AGCAAAACCGTCAGAAAACACT 59.247 40.909 0.00 0.00 0.00 3.55
2124 2551 4.021925 ACGGCCTGGTTCAGCCTC 62.022 66.667 0.00 0.00 38.35 4.70
2172 2599 1.668151 GCCGAAAGACACCTTCGCT 60.668 57.895 0.00 0.00 0.00 4.93
2177 2607 4.699522 GGCCGCCGAAAGACACCT 62.700 66.667 0.00 0.00 0.00 4.00
2184 2614 1.962306 GTTGTAGTGGCCGCCGAAA 60.962 57.895 14.07 1.46 0.00 3.46
2201 2631 2.124653 TGGCACGTCAAAACCCGT 60.125 55.556 0.00 0.00 37.90 5.28
2235 2668 1.606480 GGATGTCATGGATGCGTCGAT 60.606 52.381 0.00 0.00 0.00 3.59
2341 2789 5.301835 ACTGATGCAATCTACCAGCTATT 57.698 39.130 0.00 0.00 45.81 1.73
2342 2790 4.262808 GGACTGATGCAATCTACCAGCTAT 60.263 45.833 0.00 0.00 45.81 2.97
2343 2791 3.070159 GGACTGATGCAATCTACCAGCTA 59.930 47.826 0.00 0.00 45.81 3.32
2344 2792 2.158842 GGACTGATGCAATCTACCAGCT 60.159 50.000 0.00 0.00 45.81 4.24
2345 2793 2.216898 GGACTGATGCAATCTACCAGC 58.783 52.381 0.00 0.00 45.81 4.85
2347 2795 2.840038 AGTGGACTGATGCAATCTACCA 59.160 45.455 0.00 0.00 45.81 3.25
2349 2797 5.269505 AGTAGTGGACTGATGCAATCTAC 57.730 43.478 0.00 0.00 45.81 2.59
2351 2799 3.133721 GGAGTAGTGGACTGATGCAATCT 59.866 47.826 0.00 0.00 45.81 2.40
2353 2801 2.840038 TGGAGTAGTGGACTGATGCAAT 59.160 45.455 0.00 0.00 39.06 3.56
2354 2802 2.028112 GTGGAGTAGTGGACTGATGCAA 60.028 50.000 0.00 0.00 39.06 4.08
2355 2803 1.550524 GTGGAGTAGTGGACTGATGCA 59.449 52.381 0.00 0.00 39.06 3.96
2357 2805 2.828520 ACAGTGGAGTAGTGGACTGATG 59.171 50.000 11.04 0.00 39.06 3.07
2359 2807 2.158519 TGACAGTGGAGTAGTGGACTGA 60.159 50.000 11.04 0.00 39.06 3.41
2360 2808 2.239400 TGACAGTGGAGTAGTGGACTG 58.761 52.381 0.00 0.00 39.06 3.51
2361 2809 2.677542 TGACAGTGGAGTAGTGGACT 57.322 50.000 0.00 0.00 42.90 3.85
2362 2810 2.563179 ACATGACAGTGGAGTAGTGGAC 59.437 50.000 0.00 0.00 33.84 4.02
2363 2811 2.889512 ACATGACAGTGGAGTAGTGGA 58.110 47.619 0.00 0.00 33.84 4.02
2365 2813 4.783764 TGTACATGACAGTGGAGTAGTG 57.216 45.455 0.00 0.00 32.86 2.74
2366 2814 6.360370 AAATGTACATGACAGTGGAGTAGT 57.640 37.500 9.63 0.00 42.79 2.73
2367 2815 5.812642 GGAAATGTACATGACAGTGGAGTAG 59.187 44.000 9.63 0.00 42.79 2.57
2368 2816 5.483937 AGGAAATGTACATGACAGTGGAGTA 59.516 40.000 9.63 0.00 42.79 2.59
2369 2817 4.287067 AGGAAATGTACATGACAGTGGAGT 59.713 41.667 9.63 0.00 42.79 3.85
2370 2818 4.836825 AGGAAATGTACATGACAGTGGAG 58.163 43.478 9.63 0.00 42.79 3.86
2411 2864 7.762159 GCGGAGAAAATCAAACCCAAAATAATA 59.238 33.333 0.00 0.00 0.00 0.98
2448 2902 0.771755 AATAATCGGAGGGGAAGGCC 59.228 55.000 0.00 0.00 0.00 5.19
2485 2939 0.531532 GAGCATCCTCACCATCCGTG 60.532 60.000 0.00 0.00 44.50 4.94
2487 2941 0.249784 CAGAGCATCCTCACCATCCG 60.250 60.000 0.00 0.00 40.68 4.18
2592 3101 1.136147 CTGCAGTCAATTCCAGCGC 59.864 57.895 5.25 0.00 0.00 5.92
2593 3102 1.136147 GCTGCAGTCAATTCCAGCG 59.864 57.895 16.64 0.00 40.90 5.18
2595 3104 1.531423 ACAGCTGCAGTCAATTCCAG 58.469 50.000 15.27 0.00 0.00 3.86
2596 3105 2.302733 TCTACAGCTGCAGTCAATTCCA 59.697 45.455 15.27 0.00 0.00 3.53
2597 3106 2.977914 TCTACAGCTGCAGTCAATTCC 58.022 47.619 15.27 0.00 0.00 3.01
2598 3107 5.355596 AGTATCTACAGCTGCAGTCAATTC 58.644 41.667 15.27 0.00 0.00 2.17
2599 3108 5.350504 AGTATCTACAGCTGCAGTCAATT 57.649 39.130 15.27 0.00 0.00 2.32
2600 3109 5.596361 AGTAGTATCTACAGCTGCAGTCAAT 59.404 40.000 15.27 2.65 0.00 2.57
2601 3110 4.950475 AGTAGTATCTACAGCTGCAGTCAA 59.050 41.667 15.27 0.00 0.00 3.18
2602 3111 4.527944 AGTAGTATCTACAGCTGCAGTCA 58.472 43.478 15.27 0.00 0.00 3.41
2603 3112 4.023536 GGAGTAGTATCTACAGCTGCAGTC 60.024 50.000 15.27 7.83 0.00 3.51
2604 3113 3.886505 GGAGTAGTATCTACAGCTGCAGT 59.113 47.826 15.27 1.86 0.00 4.40
2605 3114 3.058570 CGGAGTAGTATCTACAGCTGCAG 60.059 52.174 15.27 11.27 0.00 4.41
2606 3115 2.879026 CGGAGTAGTATCTACAGCTGCA 59.121 50.000 15.27 0.00 0.00 4.41
2607 3116 2.350964 GCGGAGTAGTATCTACAGCTGC 60.351 54.545 15.27 11.61 0.00 5.25
2608 3117 2.226912 GGCGGAGTAGTATCTACAGCTG 59.773 54.545 13.48 13.48 0.00 4.24
2609 3118 2.506444 GGCGGAGTAGTATCTACAGCT 58.494 52.381 9.16 0.00 0.00 4.24
2610 3119 1.197264 CGGCGGAGTAGTATCTACAGC 59.803 57.143 0.00 10.12 0.00 4.40
2611 3120 1.805345 CCGGCGGAGTAGTATCTACAG 59.195 57.143 24.41 0.00 0.00 2.74
2612 3121 1.888215 CCGGCGGAGTAGTATCTACA 58.112 55.000 24.41 0.00 0.00 2.74
2613 3122 0.520847 GCCGGCGGAGTAGTATCTAC 59.479 60.000 33.44 2.51 0.00 2.59
2614 3123 0.607489 GGCCGGCGGAGTAGTATCTA 60.607 60.000 33.44 0.00 0.00 1.98
2615 3124 1.902432 GGCCGGCGGAGTAGTATCT 60.902 63.158 33.44 0.00 0.00 1.98
2616 3125 1.741327 TTGGCCGGCGGAGTAGTATC 61.741 60.000 33.44 8.98 0.00 2.24
2617 3126 1.745320 CTTGGCCGGCGGAGTAGTAT 61.745 60.000 33.44 0.00 0.00 2.12
2618 3127 2.362760 TTGGCCGGCGGAGTAGTA 60.363 61.111 33.44 5.03 0.00 1.82
2619 3128 3.771160 CTTGGCCGGCGGAGTAGT 61.771 66.667 33.44 0.00 0.00 2.73
2620 3129 3.771160 ACTTGGCCGGCGGAGTAG 61.771 66.667 33.44 23.23 0.00 2.57
2621 3130 4.077184 CACTTGGCCGGCGGAGTA 62.077 66.667 33.44 12.02 0.00 2.59
2711 3220 1.067071 AGGGAAGGAATCAACGTCGAC 60.067 52.381 5.18 5.18 0.00 4.20
2713 3222 2.000447 GAAGGGAAGGAATCAACGTCG 59.000 52.381 0.00 0.00 0.00 5.12
2728 3237 1.994463 CAGGAACAGGAGGGAAGGG 59.006 63.158 0.00 0.00 0.00 3.95
2745 3254 1.821759 CATATTCCGTTGCCCCGCA 60.822 57.895 0.00 0.00 36.47 5.69
2758 3271 1.210478 ACCTCCGAGCAACTGCATATT 59.790 47.619 4.22 0.00 45.16 1.28
2799 3312 1.961277 CTCCGTGAACAGTGGCCAC 60.961 63.158 29.22 29.22 0.00 5.01
2803 3316 0.389948 GGCTACTCCGTGAACAGTGG 60.390 60.000 0.00 0.00 0.00 4.00
2804 3317 0.603569 AGGCTACTCCGTGAACAGTG 59.396 55.000 0.00 0.00 40.77 3.66
2805 3318 1.000955 CAAGGCTACTCCGTGAACAGT 59.999 52.381 0.00 0.00 45.67 3.55
2806 3319 1.673033 CCAAGGCTACTCCGTGAACAG 60.673 57.143 0.00 0.00 45.67 3.16
2807 3320 0.320374 CCAAGGCTACTCCGTGAACA 59.680 55.000 0.00 0.00 45.67 3.18
2808 3321 1.019805 GCCAAGGCTACTCCGTGAAC 61.020 60.000 3.29 0.00 45.67 3.18
2809 3322 1.295423 GCCAAGGCTACTCCGTGAA 59.705 57.895 3.29 0.00 45.67 3.18
2810 3323 2.656069 GGCCAAGGCTACTCCGTGA 61.656 63.158 11.40 0.00 45.67 4.35
2811 3324 2.125106 GGCCAAGGCTACTCCGTG 60.125 66.667 11.40 0.00 42.95 4.94
2812 3325 3.400054 GGGCCAAGGCTACTCCGT 61.400 66.667 11.40 0.00 41.60 4.69
2813 3326 4.530857 CGGGCCAAGGCTACTCCG 62.531 72.222 11.40 11.26 41.60 4.63
2814 3327 4.176752 CCGGGCCAAGGCTACTCC 62.177 72.222 11.40 2.54 41.60 3.85
2827 3340 4.988598 ACAGAGCAACGTGCCGGG 62.989 66.667 2.18 0.00 46.52 5.73
2828 3341 3.716006 CACAGAGCAACGTGCCGG 61.716 66.667 0.00 0.00 46.52 6.13
2829 3342 1.218875 TAACACAGAGCAACGTGCCG 61.219 55.000 6.39 0.00 46.52 5.69
2830 3343 0.234884 GTAACACAGAGCAACGTGCC 59.765 55.000 6.39 0.00 46.52 5.01
2831 3344 0.934496 TGTAACACAGAGCAACGTGC 59.066 50.000 0.00 0.00 45.46 5.34
2832 3345 3.002246 ACAATGTAACACAGAGCAACGTG 59.998 43.478 0.00 0.00 39.10 4.49
2833 3346 3.002246 CACAATGTAACACAGAGCAACGT 59.998 43.478 0.00 0.00 0.00 3.99
2834 3347 3.247411 TCACAATGTAACACAGAGCAACG 59.753 43.478 0.00 0.00 0.00 4.10
2835 3348 4.035091 TGTCACAATGTAACACAGAGCAAC 59.965 41.667 0.00 0.00 0.00 4.17
2836 3349 4.195416 TGTCACAATGTAACACAGAGCAA 58.805 39.130 0.00 0.00 0.00 3.91
2837 3350 3.802866 TGTCACAATGTAACACAGAGCA 58.197 40.909 0.00 0.00 0.00 4.26
2838 3351 3.187227 CCTGTCACAATGTAACACAGAGC 59.813 47.826 16.40 0.00 37.28 4.09
2839 3352 4.212004 CACCTGTCACAATGTAACACAGAG 59.788 45.833 16.40 10.95 37.28 3.35
2840 3353 4.126437 CACCTGTCACAATGTAACACAGA 58.874 43.478 16.40 0.00 37.28 3.41
2841 3354 4.126437 TCACCTGTCACAATGTAACACAG 58.874 43.478 10.62 10.62 35.27 3.66
2842 3355 4.126437 CTCACCTGTCACAATGTAACACA 58.874 43.478 0.00 0.00 0.00 3.72
2843 3356 3.058914 GCTCACCTGTCACAATGTAACAC 60.059 47.826 0.00 0.00 0.00 3.32
2844 3357 3.138304 GCTCACCTGTCACAATGTAACA 58.862 45.455 0.00 0.00 0.00 2.41
2845 3358 3.187227 CAGCTCACCTGTCACAATGTAAC 59.813 47.826 0.00 0.00 36.79 2.50
2846 3359 3.070878 TCAGCTCACCTGTCACAATGTAA 59.929 43.478 0.00 0.00 42.38 2.41
2847 3360 2.632512 TCAGCTCACCTGTCACAATGTA 59.367 45.455 0.00 0.00 42.38 2.29
2848 3361 1.417517 TCAGCTCACCTGTCACAATGT 59.582 47.619 0.00 0.00 42.38 2.71
2849 3362 2.174363 TCAGCTCACCTGTCACAATG 57.826 50.000 0.00 0.00 42.38 2.82
2850 3363 3.008813 AGAATCAGCTCACCTGTCACAAT 59.991 43.478 0.00 0.00 42.38 2.71
2851 3364 2.369860 AGAATCAGCTCACCTGTCACAA 59.630 45.455 0.00 0.00 42.38 3.33
2852 3365 1.973515 AGAATCAGCTCACCTGTCACA 59.026 47.619 0.00 0.00 42.38 3.58
2853 3366 2.615869 GAGAATCAGCTCACCTGTCAC 58.384 52.381 0.00 0.00 42.38 3.67
2854 3367 1.552337 GGAGAATCAGCTCACCTGTCA 59.448 52.381 0.00 0.00 42.38 3.58
2855 3368 1.134551 GGGAGAATCAGCTCACCTGTC 60.135 57.143 0.00 0.00 42.38 3.51
2856 3369 0.908198 GGGAGAATCAGCTCACCTGT 59.092 55.000 0.00 0.00 42.38 4.00
2857 3370 1.138661 GAGGGAGAATCAGCTCACCTG 59.861 57.143 0.00 0.00 39.15 4.00
2858 3371 1.494960 GAGGGAGAATCAGCTCACCT 58.505 55.000 0.00 0.00 39.15 4.00
2859 3372 0.467804 GGAGGGAGAATCAGCTCACC 59.532 60.000 0.00 0.00 39.15 4.02
2860 3373 1.412343 GAGGAGGGAGAATCAGCTCAC 59.588 57.143 0.00 0.00 38.62 3.51
2861 3374 1.290431 AGAGGAGGGAGAATCAGCTCA 59.710 52.381 0.00 0.00 36.62 4.26
2862 3375 2.086610 AGAGGAGGGAGAATCAGCTC 57.913 55.000 0.00 0.00 36.25 4.09
2863 3376 2.397597 GAAGAGGAGGGAGAATCAGCT 58.602 52.381 0.00 0.00 36.25 4.24
2864 3377 1.416030 GGAAGAGGAGGGAGAATCAGC 59.584 57.143 0.00 0.00 36.25 4.26
2865 3378 2.046292 GGGAAGAGGAGGGAGAATCAG 58.954 57.143 0.00 0.00 36.25 2.90
2866 3379 1.689575 CGGGAAGAGGAGGGAGAATCA 60.690 57.143 0.00 0.00 36.25 2.57
2867 3380 1.044611 CGGGAAGAGGAGGGAGAATC 58.955 60.000 0.00 0.00 0.00 2.52
2868 3381 1.051556 GCGGGAAGAGGAGGGAGAAT 61.052 60.000 0.00 0.00 0.00 2.40
2869 3382 1.686110 GCGGGAAGAGGAGGGAGAA 60.686 63.158 0.00 0.00 0.00 2.87
2870 3383 2.042843 GCGGGAAGAGGAGGGAGA 60.043 66.667 0.00 0.00 0.00 3.71
2871 3384 2.364317 TGCGGGAAGAGGAGGGAG 60.364 66.667 0.00 0.00 0.00 4.30
2872 3385 2.364317 CTGCGGGAAGAGGAGGGA 60.364 66.667 0.00 0.00 0.00 4.20
2873 3386 2.685380 ACTGCGGGAAGAGGAGGG 60.685 66.667 0.00 0.00 0.00 4.30
2874 3387 1.544825 TTGACTGCGGGAAGAGGAGG 61.545 60.000 0.00 0.00 0.00 4.30
2875 3388 0.321671 TTTGACTGCGGGAAGAGGAG 59.678 55.000 0.00 0.00 0.00 3.69
2876 3389 0.762418 TTTTGACTGCGGGAAGAGGA 59.238 50.000 0.00 0.00 0.00 3.71
2877 3390 1.826385 ATTTTGACTGCGGGAAGAGG 58.174 50.000 0.00 0.00 0.00 3.69
2878 3391 2.554032 ACAATTTTGACTGCGGGAAGAG 59.446 45.455 0.00 0.00 0.00 2.85
2879 3392 2.582052 ACAATTTTGACTGCGGGAAGA 58.418 42.857 0.00 0.00 0.00 2.87
2880 3393 3.369546 AACAATTTTGACTGCGGGAAG 57.630 42.857 0.00 0.00 0.00 3.46
2881 3394 3.131223 TCAAACAATTTTGACTGCGGGAA 59.869 39.130 0.00 0.00 45.08 3.97
2882 3395 2.690497 TCAAACAATTTTGACTGCGGGA 59.310 40.909 0.00 0.00 45.08 5.14
2883 3396 3.090952 TCAAACAATTTTGACTGCGGG 57.909 42.857 0.00 0.00 45.08 6.13
2897 3410 4.750952 TCTCAACGTGTTGTTTCAAACA 57.249 36.364 12.10 0.00 39.29 2.83
2898 3411 5.797934 TGAATCTCAACGTGTTGTTTCAAAC 59.202 36.000 12.10 0.00 39.29 2.93
2899 3412 5.944013 TGAATCTCAACGTGTTGTTTCAAA 58.056 33.333 12.10 0.00 39.29 2.69
2900 3413 5.553290 TGAATCTCAACGTGTTGTTTCAA 57.447 34.783 12.10 4.35 39.29 2.69
2901 3414 4.495679 GCTGAATCTCAACGTGTTGTTTCA 60.496 41.667 12.10 15.92 39.29 2.69
2902 3415 3.968724 GCTGAATCTCAACGTGTTGTTTC 59.031 43.478 12.10 13.03 39.29 2.78
2903 3416 3.243068 GGCTGAATCTCAACGTGTTGTTT 60.243 43.478 12.10 5.58 39.29 2.83
2904 3417 2.290641 GGCTGAATCTCAACGTGTTGTT 59.709 45.455 12.10 0.24 43.09 2.83
2905 3418 1.873591 GGCTGAATCTCAACGTGTTGT 59.126 47.619 12.10 0.00 41.16 3.32
2906 3419 1.136252 CGGCTGAATCTCAACGTGTTG 60.136 52.381 6.39 6.39 41.71 3.33
2907 3420 1.148310 CGGCTGAATCTCAACGTGTT 58.852 50.000 0.00 0.00 0.00 3.32
2908 3421 0.033504 ACGGCTGAATCTCAACGTGT 59.966 50.000 0.00 0.00 38.19 4.49
2909 3422 0.439985 CACGGCTGAATCTCAACGTG 59.560 55.000 14.82 14.82 44.82 4.49
2910 3423 0.033504 ACACGGCTGAATCTCAACGT 59.966 50.000 0.00 0.00 39.51 3.99
2911 3424 1.920574 CTACACGGCTGAATCTCAACG 59.079 52.381 0.00 0.00 34.41 4.10
2912 3425 2.271800 CCTACACGGCTGAATCTCAAC 58.728 52.381 0.00 0.00 0.00 3.18
2913 3426 2.672961 CCTACACGGCTGAATCTCAA 57.327 50.000 0.00 0.00 0.00 3.02
2924 3437 1.410004 TTATCTCCCTGCCTACACGG 58.590 55.000 0.00 0.00 0.00 4.94
2925 3438 3.536956 TTTTATCTCCCTGCCTACACG 57.463 47.619 0.00 0.00 0.00 4.49
2926 3439 5.685728 AGATTTTTATCTCCCTGCCTACAC 58.314 41.667 0.00 0.00 0.00 2.90
2927 3440 5.453339 CGAGATTTTTATCTCCCTGCCTACA 60.453 44.000 9.01 0.00 43.05 2.74
2928 3441 4.991687 CGAGATTTTTATCTCCCTGCCTAC 59.008 45.833 9.01 0.00 43.05 3.18
2929 3442 4.503296 GCGAGATTTTTATCTCCCTGCCTA 60.503 45.833 9.01 0.00 43.05 3.93
2930 3443 3.745797 GCGAGATTTTTATCTCCCTGCCT 60.746 47.826 9.01 0.00 43.05 4.75
2931 3444 2.550180 GCGAGATTTTTATCTCCCTGCC 59.450 50.000 9.01 0.00 43.05 4.85
2932 3445 3.002759 GTGCGAGATTTTTATCTCCCTGC 59.997 47.826 9.01 7.68 43.05 4.85
2933 3446 3.561725 GGTGCGAGATTTTTATCTCCCTG 59.438 47.826 9.01 0.00 43.05 4.45
2934 3447 3.456277 AGGTGCGAGATTTTTATCTCCCT 59.544 43.478 9.01 7.34 43.05 4.20
2935 3448 3.809905 AGGTGCGAGATTTTTATCTCCC 58.190 45.455 9.01 5.55 43.05 4.30
2936 3449 5.602628 AGTAGGTGCGAGATTTTTATCTCC 58.397 41.667 9.01 4.04 43.05 3.71
2937 3450 7.427214 AGTAGTAGGTGCGAGATTTTTATCTC 58.573 38.462 5.31 5.31 42.68 2.75
2938 3451 7.285858 AGAGTAGTAGGTGCGAGATTTTTATCT 59.714 37.037 0.00 0.00 0.00 1.98
2939 3452 7.427214 AGAGTAGTAGGTGCGAGATTTTTATC 58.573 38.462 0.00 0.00 0.00 1.75
2940 3453 7.349412 AGAGTAGTAGGTGCGAGATTTTTAT 57.651 36.000 0.00 0.00 0.00 1.40
2941 3454 6.770746 AGAGTAGTAGGTGCGAGATTTTTA 57.229 37.500 0.00 0.00 0.00 1.52
2942 3455 5.662674 AGAGTAGTAGGTGCGAGATTTTT 57.337 39.130 0.00 0.00 0.00 1.94
2943 3456 5.887035 AGTAGAGTAGTAGGTGCGAGATTTT 59.113 40.000 0.00 0.00 0.00 1.82
2944 3457 5.438833 AGTAGAGTAGTAGGTGCGAGATTT 58.561 41.667 0.00 0.00 0.00 2.17
2945 3458 5.038651 AGTAGAGTAGTAGGTGCGAGATT 57.961 43.478 0.00 0.00 0.00 2.40
2946 3459 4.693042 AGTAGAGTAGTAGGTGCGAGAT 57.307 45.455 0.00 0.00 0.00 2.75
2947 3460 4.648762 ACTAGTAGAGTAGTAGGTGCGAGA 59.351 45.833 3.59 0.00 36.27 4.04
2948 3461 4.947645 ACTAGTAGAGTAGTAGGTGCGAG 58.052 47.826 3.59 0.00 36.27 5.03
2949 3462 5.360999 TGTACTAGTAGAGTAGTAGGTGCGA 59.639 44.000 1.87 0.00 41.47 5.10
2950 3463 5.595885 TGTACTAGTAGAGTAGTAGGTGCG 58.404 45.833 1.87 0.00 41.47 5.34
2951 3464 7.215789 TGATGTACTAGTAGAGTAGTAGGTGC 58.784 42.308 1.87 0.00 41.47 5.01
2952 3465 8.640651 TCTGATGTACTAGTAGAGTAGTAGGTG 58.359 40.741 1.87 0.00 41.47 4.00
2953 3466 8.780616 TCTGATGTACTAGTAGAGTAGTAGGT 57.219 38.462 1.87 0.00 41.47 3.08
2954 3467 9.647797 CATCTGATGTACTAGTAGAGTAGTAGG 57.352 40.741 9.50 0.00 41.47 3.18
2957 3470 9.719355 CATCATCTGATGTACTAGTAGAGTAGT 57.281 37.037 16.66 2.71 45.10 2.73
2973 3486 4.469883 GGCACGGCATCATCTGAT 57.530 55.556 0.00 0.00 34.56 2.90
2993 3506 4.731612 CTGTCACCGAGCAGCGCT 62.732 66.667 2.64 2.64 43.88 5.92
2995 3508 2.825726 ATCACTGTCACCGAGCAGCG 62.826 60.000 0.00 0.00 36.26 5.18
2996 3509 1.079543 ATCACTGTCACCGAGCAGC 60.080 57.895 0.00 0.00 36.26 5.25
2997 3510 0.738762 CCATCACTGTCACCGAGCAG 60.739 60.000 0.00 0.00 38.58 4.24
2998 3511 1.184970 TCCATCACTGTCACCGAGCA 61.185 55.000 0.00 0.00 0.00 4.26
2999 3512 0.176680 ATCCATCACTGTCACCGAGC 59.823 55.000 0.00 0.00 0.00 5.03
3000 3513 1.472201 CCATCCATCACTGTCACCGAG 60.472 57.143 0.00 0.00 0.00 4.63
3001 3514 0.536724 CCATCCATCACTGTCACCGA 59.463 55.000 0.00 0.00 0.00 4.69
3002 3515 0.462581 CCCATCCATCACTGTCACCG 60.463 60.000 0.00 0.00 0.00 4.94
3003 3516 0.911769 TCCCATCCATCACTGTCACC 59.088 55.000 0.00 0.00 0.00 4.02
3004 3517 2.237143 TCTTCCCATCCATCACTGTCAC 59.763 50.000 0.00 0.00 0.00 3.67
3005 3518 2.550175 TCTTCCCATCCATCACTGTCA 58.450 47.619 0.00 0.00 0.00 3.58
3006 3519 3.539604 CTTCTTCCCATCCATCACTGTC 58.460 50.000 0.00 0.00 0.00 3.51
3007 3520 2.356535 GCTTCTTCCCATCCATCACTGT 60.357 50.000 0.00 0.00 0.00 3.55
3008 3521 2.092538 AGCTTCTTCCCATCCATCACTG 60.093 50.000 0.00 0.00 0.00 3.66
3009 3522 2.092538 CAGCTTCTTCCCATCCATCACT 60.093 50.000 0.00 0.00 0.00 3.41
3010 3523 2.295885 CAGCTTCTTCCCATCCATCAC 58.704 52.381 0.00 0.00 0.00 3.06
3011 3524 1.918262 ACAGCTTCTTCCCATCCATCA 59.082 47.619 0.00 0.00 0.00 3.07
3012 3525 2.570135 GACAGCTTCTTCCCATCCATC 58.430 52.381 0.00 0.00 0.00 3.51
3013 3526 1.213926 GGACAGCTTCTTCCCATCCAT 59.786 52.381 0.00 0.00 0.00 3.41
3014 3527 0.620556 GGACAGCTTCTTCCCATCCA 59.379 55.000 0.00 0.00 0.00 3.41
3015 3528 3.485764 GGACAGCTTCTTCCCATCC 57.514 57.895 0.00 0.00 0.00 3.51
3020 3533 0.391793 CTTCGGGGACAGCTTCTTCC 60.392 60.000 0.00 0.00 0.00 3.46
3021 3534 0.608640 TCTTCGGGGACAGCTTCTTC 59.391 55.000 0.00 0.00 0.00 2.87
3022 3535 1.065854 CATCTTCGGGGACAGCTTCTT 60.066 52.381 0.00 0.00 0.00 2.52
3023 3536 0.539051 CATCTTCGGGGACAGCTTCT 59.461 55.000 0.00 0.00 0.00 2.85
3024 3537 0.537188 TCATCTTCGGGGACAGCTTC 59.463 55.000 0.00 0.00 0.00 3.86
3025 3538 0.250513 GTCATCTTCGGGGACAGCTT 59.749 55.000 0.00 0.00 0.00 3.74
3026 3539 1.901085 GTCATCTTCGGGGACAGCT 59.099 57.895 0.00 0.00 0.00 4.24
3027 3540 1.519455 CGTCATCTTCGGGGACAGC 60.519 63.158 0.00 0.00 0.00 4.40
3028 3541 1.141881 CCGTCATCTTCGGGGACAG 59.858 63.158 0.00 0.00 43.68 3.51
3029 3542 3.294750 CCGTCATCTTCGGGGACA 58.705 61.111 0.00 0.00 43.68 4.02
3034 3547 1.196808 CAAAACACCCGTCATCTTCGG 59.803 52.381 0.00 0.00 46.49 4.30
3035 3548 1.871039 ACAAAACACCCGTCATCTTCG 59.129 47.619 0.00 0.00 0.00 3.79
3036 3549 3.982576 AACAAAACACCCGTCATCTTC 57.017 42.857 0.00 0.00 0.00 2.87
3037 3550 3.951680 AGAAACAAAACACCCGTCATCTT 59.048 39.130 0.00 0.00 0.00 2.40
3038 3551 3.315191 CAGAAACAAAACACCCGTCATCT 59.685 43.478 0.00 0.00 0.00 2.90
3039 3552 3.066203 ACAGAAACAAAACACCCGTCATC 59.934 43.478 0.00 0.00 0.00 2.92
3040 3553 3.020984 ACAGAAACAAAACACCCGTCAT 58.979 40.909 0.00 0.00 0.00 3.06
3041 3554 2.438411 ACAGAAACAAAACACCCGTCA 58.562 42.857 0.00 0.00 0.00 4.35
3042 3555 3.175929 CAACAGAAACAAAACACCCGTC 58.824 45.455 0.00 0.00 0.00 4.79
3043 3556 2.559231 ACAACAGAAACAAAACACCCGT 59.441 40.909 0.00 0.00 0.00 5.28
3044 3557 3.224884 ACAACAGAAACAAAACACCCG 57.775 42.857 0.00 0.00 0.00 5.28
3045 3558 4.561105 TCAACAACAGAAACAAAACACCC 58.439 39.130 0.00 0.00 0.00 4.61
3046 3559 4.625311 CCTCAACAACAGAAACAAAACACC 59.375 41.667 0.00 0.00 0.00 4.16
3047 3560 4.625311 CCCTCAACAACAGAAACAAAACAC 59.375 41.667 0.00 0.00 0.00 3.32
3048 3561 4.322349 CCCCTCAACAACAGAAACAAAACA 60.322 41.667 0.00 0.00 0.00 2.83
3049 3562 4.081917 TCCCCTCAACAACAGAAACAAAAC 60.082 41.667 0.00 0.00 0.00 2.43
3050 3563 4.090090 TCCCCTCAACAACAGAAACAAAA 58.910 39.130 0.00 0.00 0.00 2.44
3051 3564 3.699038 CTCCCCTCAACAACAGAAACAAA 59.301 43.478 0.00 0.00 0.00 2.83
3052 3565 3.053991 TCTCCCCTCAACAACAGAAACAA 60.054 43.478 0.00 0.00 0.00 2.83
3053 3566 2.507886 TCTCCCCTCAACAACAGAAACA 59.492 45.455 0.00 0.00 0.00 2.83
3054 3567 3.208747 TCTCCCCTCAACAACAGAAAC 57.791 47.619 0.00 0.00 0.00 2.78
3055 3568 3.943671 TTCTCCCCTCAACAACAGAAA 57.056 42.857 0.00 0.00 0.00 2.52
3056 3569 3.244911 GGATTCTCCCCTCAACAACAGAA 60.245 47.826 0.00 0.00 0.00 3.02
3057 3570 2.305927 GGATTCTCCCCTCAACAACAGA 59.694 50.000 0.00 0.00 0.00 3.41
3058 3571 2.040278 TGGATTCTCCCCTCAACAACAG 59.960 50.000 0.00 0.00 35.03 3.16
3059 3572 2.040278 CTGGATTCTCCCCTCAACAACA 59.960 50.000 0.00 0.00 35.03 3.33
3060 3573 2.619074 CCTGGATTCTCCCCTCAACAAC 60.619 54.545 0.00 0.00 35.03 3.32
3061 3574 1.635487 CCTGGATTCTCCCCTCAACAA 59.365 52.381 0.00 0.00 35.03 2.83
3062 3575 1.203428 TCCTGGATTCTCCCCTCAACA 60.203 52.381 0.00 0.00 35.03 3.33
3063 3576 1.584724 TCCTGGATTCTCCCCTCAAC 58.415 55.000 0.00 0.00 35.03 3.18
3064 3577 2.200081 CTTCCTGGATTCTCCCCTCAA 58.800 52.381 0.00 0.00 35.03 3.02
3065 3578 1.366082 TCTTCCTGGATTCTCCCCTCA 59.634 52.381 0.00 0.00 35.03 3.86
3066 3579 1.765904 GTCTTCCTGGATTCTCCCCTC 59.234 57.143 0.00 0.00 35.03 4.30
3067 3580 1.886422 GTCTTCCTGGATTCTCCCCT 58.114 55.000 0.00 0.00 35.03 4.79
3068 3581 0.466124 CGTCTTCCTGGATTCTCCCC 59.534 60.000 0.00 0.00 35.03 4.81
3069 3582 1.410882 CTCGTCTTCCTGGATTCTCCC 59.589 57.143 0.00 0.00 35.03 4.30
3070 3583 2.104170 ACTCGTCTTCCTGGATTCTCC 58.896 52.381 0.00 0.00 36.96 3.71
3071 3584 3.878160 AACTCGTCTTCCTGGATTCTC 57.122 47.619 0.00 0.00 0.00 2.87
3072 3585 3.578716 TCAAACTCGTCTTCCTGGATTCT 59.421 43.478 0.00 0.00 0.00 2.40
3073 3586 3.926616 TCAAACTCGTCTTCCTGGATTC 58.073 45.455 0.00 0.00 0.00 2.52
3074 3587 3.325135 ACTCAAACTCGTCTTCCTGGATT 59.675 43.478 0.00 0.00 0.00 3.01
3075 3588 2.900546 ACTCAAACTCGTCTTCCTGGAT 59.099 45.455 0.00 0.00 0.00 3.41
3076 3589 2.035961 CACTCAAACTCGTCTTCCTGGA 59.964 50.000 0.00 0.00 0.00 3.86
3077 3590 2.035961 TCACTCAAACTCGTCTTCCTGG 59.964 50.000 0.00 0.00 0.00 4.45
3078 3591 3.053455 GTCACTCAAACTCGTCTTCCTG 58.947 50.000 0.00 0.00 0.00 3.86
3079 3592 2.693591 TGTCACTCAAACTCGTCTTCCT 59.306 45.455 0.00 0.00 0.00 3.36
3080 3593 2.795470 GTGTCACTCAAACTCGTCTTCC 59.205 50.000 0.00 0.00 0.00 3.46
3081 3594 3.487574 CAGTGTCACTCAAACTCGTCTTC 59.512 47.826 1.37 0.00 0.00 2.87
3082 3595 3.448686 CAGTGTCACTCAAACTCGTCTT 58.551 45.455 1.37 0.00 0.00 3.01
3083 3596 2.799917 GCAGTGTCACTCAAACTCGTCT 60.800 50.000 1.37 0.00 0.00 4.18
3084 3597 1.523095 GCAGTGTCACTCAAACTCGTC 59.477 52.381 1.37 0.00 0.00 4.20
3085 3598 1.137086 AGCAGTGTCACTCAAACTCGT 59.863 47.619 1.37 0.00 0.00 4.18
3086 3599 1.858091 AGCAGTGTCACTCAAACTCG 58.142 50.000 1.37 0.00 0.00 4.18
3087 3600 3.462021 AGAAGCAGTGTCACTCAAACTC 58.538 45.455 1.37 0.00 0.00 3.01
3088 3601 3.462021 GAGAAGCAGTGTCACTCAAACT 58.538 45.455 1.37 0.99 0.00 2.66
3089 3602 2.219674 CGAGAAGCAGTGTCACTCAAAC 59.780 50.000 1.37 0.00 0.00 2.93
3090 3603 2.473816 CGAGAAGCAGTGTCACTCAAA 58.526 47.619 1.37 0.00 0.00 2.69
3091 3604 2.140065 CGAGAAGCAGTGTCACTCAA 57.860 50.000 1.37 0.00 0.00 3.02
3092 3605 3.873805 CGAGAAGCAGTGTCACTCA 57.126 52.632 1.37 0.00 0.00 3.41
3104 3617 3.748048 TCATCAAAAACAGAGGCGAGAAG 59.252 43.478 0.00 0.00 0.00 2.85
3105 3618 3.738982 TCATCAAAAACAGAGGCGAGAA 58.261 40.909 0.00 0.00 0.00 2.87
3106 3619 3.401033 TCATCAAAAACAGAGGCGAGA 57.599 42.857 0.00 0.00 0.00 4.04
3107 3620 4.691860 ATTCATCAAAAACAGAGGCGAG 57.308 40.909 0.00 0.00 0.00 5.03
3108 3621 6.567687 TTTATTCATCAAAAACAGAGGCGA 57.432 33.333 0.00 0.00 0.00 5.54
3109 3622 5.287035 GCTTTATTCATCAAAAACAGAGGCG 59.713 40.000 0.00 0.00 0.00 5.52
3110 3623 6.393171 AGCTTTATTCATCAAAAACAGAGGC 58.607 36.000 0.00 0.00 0.00 4.70
3111 3624 7.330208 CCAAGCTTTATTCATCAAAAACAGAGG 59.670 37.037 0.00 0.00 0.00 3.69
3112 3625 8.084073 TCCAAGCTTTATTCATCAAAAACAGAG 58.916 33.333 0.00 0.00 0.00 3.35
3113 3626 7.950512 TCCAAGCTTTATTCATCAAAAACAGA 58.049 30.769 0.00 0.00 0.00 3.41
3114 3627 8.767478 ATCCAAGCTTTATTCATCAAAAACAG 57.233 30.769 0.00 0.00 0.00 3.16
3117 3630 9.651913 GGTAATCCAAGCTTTATTCATCAAAAA 57.348 29.630 0.00 0.00 0.00 1.94
3118 3631 8.811017 TGGTAATCCAAGCTTTATTCATCAAAA 58.189 29.630 0.00 0.00 41.25 2.44
3119 3632 8.359875 TGGTAATCCAAGCTTTATTCATCAAA 57.640 30.769 0.00 0.00 41.25 2.69
3120 3633 7.953005 TGGTAATCCAAGCTTTATTCATCAA 57.047 32.000 0.00 0.00 41.25 2.57
3149 3662 9.528489 TGCAAGGATACCTCTTAATTAGTTTTT 57.472 29.630 0.00 0.00 30.89 1.94
3150 3663 9.528489 TTGCAAGGATACCTCTTAATTAGTTTT 57.472 29.630 0.00 0.00 30.89 2.43
3151 3664 9.528489 TTTGCAAGGATACCTCTTAATTAGTTT 57.472 29.630 0.00 0.00 30.89 2.66
3152 3665 9.178758 CTTTGCAAGGATACCTCTTAATTAGTT 57.821 33.333 1.58 0.00 30.89 2.24
3153 3666 8.738645 CTTTGCAAGGATACCTCTTAATTAGT 57.261 34.615 1.58 0.00 30.89 2.24
3170 3683 1.815003 GATGGGAGTGACCTTTGCAAG 59.185 52.381 0.00 0.00 38.98 4.01
3171 3684 1.425066 AGATGGGAGTGACCTTTGCAA 59.575 47.619 0.00 0.00 38.98 4.08
3172 3685 1.067295 AGATGGGAGTGACCTTTGCA 58.933 50.000 0.00 0.00 38.98 4.08
3173 3686 2.087646 GAAGATGGGAGTGACCTTTGC 58.912 52.381 0.00 0.00 38.98 3.68
3174 3687 3.262915 AGAGAAGATGGGAGTGACCTTTG 59.737 47.826 0.00 0.00 38.98 2.77
3175 3688 3.525862 AGAGAAGATGGGAGTGACCTTT 58.474 45.455 0.00 0.00 38.98 3.11
3176 3689 3.197927 AGAGAAGATGGGAGTGACCTT 57.802 47.619 0.00 0.00 38.98 3.50
3177 3690 2.836981 CAAGAGAAGATGGGAGTGACCT 59.163 50.000 0.00 0.00 38.98 3.85
3178 3691 2.569404 ACAAGAGAAGATGGGAGTGACC 59.431 50.000 0.00 0.00 38.08 4.02
3179 3692 3.594134 CACAAGAGAAGATGGGAGTGAC 58.406 50.000 0.00 0.00 0.00 3.67
3180 3693 2.568956 CCACAAGAGAAGATGGGAGTGA 59.431 50.000 0.00 0.00 0.00 3.41
3181 3694 2.304180 ACCACAAGAGAAGATGGGAGTG 59.696 50.000 0.00 0.00 36.47 3.51
3182 3695 2.625639 ACCACAAGAGAAGATGGGAGT 58.374 47.619 0.00 0.00 36.47 3.85
3183 3696 3.008375 TCAACCACAAGAGAAGATGGGAG 59.992 47.826 0.00 0.00 36.47 4.30
3184 3697 2.978978 TCAACCACAAGAGAAGATGGGA 59.021 45.455 0.00 0.00 36.47 4.37
3185 3698 3.077359 GTCAACCACAAGAGAAGATGGG 58.923 50.000 0.00 0.00 36.47 4.00
3186 3699 3.743521 TGTCAACCACAAGAGAAGATGG 58.256 45.455 0.00 0.00 38.26 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.